BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006627
         (638 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  810 bits (2093), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/561 (67%), Positives = 457/561 (81%)

Query: 71  NFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFD 130
           NF  P++LKAC QV  T LGKEIHGF +K GLD D +V NAL+ MY EC  +  AR +FD
Sbjct: 94  NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
           +M  RDVVSWSTMIR   R    + ALE++REM FM +RPSEVAM+SMV+LFAD A++ +
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           GKA+HA V+RN  +E +GV   TAL+DMY+KCG+L  A+QLFN L Q +VVSWT MI+G 
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
           IR N + EG +LF  M EEN+FP+EIT+LSLI+ECGF G LQLGK LHAYILRNGF  SL
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSL 333

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
           A+A ALVDMYGKC +IR+AR LFD  +++DVMIW A++SAYAQA+CID+AF LF  M+ S
Sbjct: 334 ALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTS 393

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
            VRP +VT+V LLSLC  AGAL++GKW+H+YI+K+ +EVD IL TALVDMYAKCGD+N A
Sbjct: 394 GVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAA 453

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
            RLF EAI RDICMWNA++ G+ MHG GEEAL  F +MER GVKPN ITFIGLL+ACSHA
Sbjct: 454 GRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHA 513

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           GLVTEGK +F+KMVH  GLVP+IEHYGCMVDLLGRAGLLDEAHEMIKSMP++PN IVWGA
Sbjct: 514 GLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGA 573

Query: 551 LLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRV 610
           L+AA +LHKNP +GE+AATQ+LEIEP+N GYNVLMSNIYA ANRW+D AGVR+ MK + +
Sbjct: 574 LVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGM 633

Query: 611 KKEPGFSSVEVNGLVHKFIRG 631
           KKEPG S +EVNG VH+F+ G
Sbjct: 634 KKEPGHSVIEVNGTVHEFLMG 654



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 141/428 (32%), Positives = 235/428 (54%), Gaps = 20/428 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYA---FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +++++ S  +N +   AL +     FM+   SEV   ++  +    A + M   GK +H 
Sbjct: 163 WSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM---GKAMHA 219

Query: 96  FAIKNGLDGDAYV--SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           + I+N  +    V  + AL+ MY++CG L  AR LF+ +  + VVSW+ MI G  R    
Sbjct: 220 YVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRL 279

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           EE  ++   M+  +I P+E+ M+S++        + LGK +HA ++RN     + +A+AT
Sbjct: 280 EEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRN--GFSVSLALAT 337

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMY KC ++  A+ LF+      V+ WT M+S Y + N I++   LF +M    V P
Sbjct: 338 ALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRP 397

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +++TI+SL+  C   G L LGKW+H+YI +   E    +  ALVDMY KC +I +A  LF
Sbjct: 398 TKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLF 457

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
               S+D+ +WNA+I+ +A     ++A ++F  M+   V+PN++T +GLL  C+ AG + 
Sbjct: 458 IEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVT 517

Query: 394 MGKWL-----HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNA 447
            GK L     HT+    GL   +     +VD+  + G ++ A+ +  S  I  +  +W A
Sbjct: 518 EGKKLFEKMVHTF----GLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGA 573

Query: 448 MMAGYGMH 455
           ++A   +H
Sbjct: 574 LVAACRLH 581


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/631 (60%), Positives = 485/631 (76%), Gaps = 7/631 (1%)

Query: 8   LNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNS-------LVTSYIKNNKPSSALNIYA 60
           +NL +T+Q H H IKT    SY   +  L  Y+S       L+TSYIKNN P+ A  IYA
Sbjct: 54  INLNETQQLHGHFIKTSSNCSYRVPLAALESYSSNAAIHSFLITSYIKNNCPADAAKIYA 113

Query: 61  FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECG 120
           +MR   +EVDNF IP++LKAC  +    LG+E+HGF +KNG  GD +V NALI MYSE G
Sbjct: 114 YMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVG 173

Query: 121 SLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
           SL  AR LFD++ N+DVVSWSTMIR Y R GL +EAL+++R+M  M ++PSE+ MIS+  
Sbjct: 174 SLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITH 233

Query: 181 LFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
           + A++AD+ LGKA+HA V+RN K  K GV + TALIDMY KC NLAYA+++F+ L++ S+
Sbjct: 234 VLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKCENLAYARRVFDGLSKASI 293

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           +SWT MI+ YI CN +NEGVRLF +M+ E +FP+EIT+LSL+ ECG  G L+LGK LHA+
Sbjct: 294 ISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAF 353

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
            LRNGF  SL +A A +DMYGKC ++RSAR++FD  KSKD+M+W+A+IS+YAQ +CID+A
Sbjct: 354 TLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEA 413

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
           F++F+HM    +RPNE TMV LL +C +AG+LEMGKW+H+YI+KQG++ D+ILKT+ VDM
Sbjct: 414 FDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDM 473

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           YA CGD++ A+RLF+EA  RDI MWNAM++G+ MHG GE AL  F +ME  GV PN ITF
Sbjct: 474 YANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITF 533

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
           IG L+ACSH+GL+ EGK +F KMVH  G  PK+EHYGCMVDLLGRAGLLDEAHE+IKSMP
Sbjct: 534 IGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMP 593

Query: 541 LRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAG 600
           +RPN+ V+G+ LAA KLHKN  +GE AA Q L +EP   GYNVLMSNIYA ANRW DVA 
Sbjct: 594 MRPNIAVFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAY 653

Query: 601 VRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +RR MK+  + KEPG SS+EVNGL+H+FI G
Sbjct: 654 IRRAMKDEGIVKEPGVSSIEVNGLLHEFIMG 684


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  729 bits (1883), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/629 (56%), Positives = 454/629 (72%), Gaps = 25/629 (3%)

Query: 8   LNLEQTRQCHAHIIKTHF----KFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMR 63
           LNL+QT Q HAH IKT F     F   +   P   YN L++SY  N+ P ++ N Y  MR
Sbjct: 20  LNLQQTHQLHAHFIKTQFHNPHPFFSQSHFTPEANYNLLISSYTNNHLPQASFNCYLHMR 79

Query: 64  KN-GSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSL 122
            N  + +DNF +P++LKACAQ     LG+E+HGFA KNG   D +V NAL+ MY +CG L
Sbjct: 80  SNDAAALDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCL 139

Query: 123 VSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLF 182
           VSAR +FD+MP RDVVSW+TM+  Y R     EAL ++REM+F+ ++ S VA+IS++++F
Sbjct: 140 VSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVF 199

Query: 183 ADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVS 242
            ++ D+  G+A+H  +VRN  DEK+ V++ TALIDMY K G LA A++LF+RL++ SVVS
Sbjct: 200 GNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLSKRSVVS 259

Query: 243 WTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYIL 302
           WTVMI+G IR   ++EG + F  M+EE +FP+EIT+LSLI ECGFVG L LGKW HAY+L
Sbjct: 260 WTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLL 319

Query: 303 RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
           RNGF  SLA+  AL+DMYGKC ++  AR LF+G+K KDV IW+ +ISAYA   C+D+ F 
Sbjct: 320 RNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMDQVFN 379

Query: 363 LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYA 422
           LF+ M  + V+PN VTMV LLSLC EAGAL++GKW H YI + GLEVDVIL+TAL++MYA
Sbjct: 380 LFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYA 439

Query: 423 KCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
           KCGDV  A  LF+EA+ RDI MWN MMAG+ MHGCG+EAL  F +ME  GV+PN ITF+ 
Sbjct: 440 KCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVS 499

Query: 483 LLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
           + +ACSH+GL                    +EHYGC+VDLLGRAG LDEAH +I++MP+R
Sbjct: 500 IFHACSHSGL--------------------MEHYGCLVDLLGRAGHLDEAHNIIENMPMR 539

Query: 543 PNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVR 602
           PN I+WGALLAA KLHKN ++GE+AA +ILE++PQN GY+VL SNIYA A RWNDV  VR
Sbjct: 540 PNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVR 599

Query: 603 RVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             M    +KKEPG S +EV+G VH F  G
Sbjct: 600 EAMSHSGMKKEPGLSWIEVSGSVHHFKSG 628


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  645 bits (1663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/501 (62%), Positives = 380/501 (75%), Gaps = 24/501 (4%)

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
           P  AL     MR +DI      + S++   + ++   +GK IH   V+N       V + 
Sbjct: 90  PRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSD--VFVV 147

Query: 213 TALIDMYSKCGNLAYAKQLFNRLN----------------------QNSVVSWTVMISGY 250
            AL+ MYS+CG+L  A+ LF++++                      Q S+VSWT MI+GY
Sbjct: 148 NALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGY 207

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
           IRCN++ EG RLF  MIEENVFP++IT+LSLII CGFVG +QLGK LHAYILRNGF  SL
Sbjct: 208 IRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSL 267

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
           A+A ALVDMYGKC EIRSAR +FD MK+KDVM W A+ISAYAQA+CID AF+LF+ M+ +
Sbjct: 268 ALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDN 327

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
            VRPNE+TMV LLSLC   GAL+MGKW H YI+KQG+EVDVILKTAL+DMYAKCGD++GA
Sbjct: 328 GVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGA 387

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
            RLFSEAI RDIC WN MMAGYGMHG GE+AL  F +ME  GVKPN ITFIG L+ACSHA
Sbjct: 388 QRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHA 447

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           GLV EGK +F+KM+H  GLVPK+EHYGCMVDLLGRAGLLDEA++MI+SMP+ PN+ +WGA
Sbjct: 448 GLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGA 507

Query: 551 LLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRV 610
           +LAA K+HKN +MGE+AA ++L +EPQN GY VLMSNIYA ANRWNDVAG+R+ +K+  +
Sbjct: 508 MLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGI 567

Query: 611 KKEPGFSSVEVNGLVHKFIRG 631
           KKEPG SS+EVNGLVH F  G
Sbjct: 568 KKEPGMSSIEVNGLVHDFKMG 588



 Score =  341 bits (874), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 186/475 (39%), Positives = 271/475 (57%), Gaps = 38/475 (8%)

Query: 5   NGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRK 64
           N  L L+QT+Q HAHI +THF  +     +P   +            P  ALN Y +MRK
Sbjct: 55  NNHLCLDQTQQLHAHITRTHFNHAQQVSFSPFESH------------PRYALNTYTYMRK 102

Query: 65  NGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVS 124
              EVD+F IP++LKAC+Q+ +  +GKEIHGF++KNGL  D +V NAL+QMYSECGSLVS
Sbjct: 103 LDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVS 162

Query: 125 ARYLFDEMPNRDVVSWSTMIR----------------------GYHRGGLPEEALEVMRE 162
           AR LFD+M  RDVVSWSTMIR                      GY R    EE   +   
Sbjct: 163 ARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVR 222

Query: 163 MRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC 222
           M   ++ P+++ M+S++     V  V LGK +HA ++RN     + +A+ATAL+DMY KC
Sbjct: 223 MIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRN--GFGMSLALATALVDMYGKC 280

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI 282
           G +  A+ +F+ +    V++WT MIS Y + N I+   +LF +M +  V P+E+T++SL+
Sbjct: 281 GEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLL 340

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
             C   G L +GKW HAYI + G E  + +  AL+DMY KC +I  A+ LF     +D+ 
Sbjct: 341 SLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDIC 400

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL-HTY 401
            WN +++ Y      +KA +LF  M+   V+PN++T +G L  C+ AG +  GK L    
Sbjct: 401 TWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKM 460

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMH 455
           I   GL   V     +VD+  + G ++ AY++  S  +  +I +W AM+A   +H
Sbjct: 461 IHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIH 515


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 276/526 (52%), Positives = 354/526 (67%), Gaps = 35/526 (6%)

Query: 139 SWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACV 198
            W+ +I  Y +   P  AL V  ++R MD         S++     V+   LGK IH  V
Sbjct: 91  QWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 150

Query: 199 VRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE 258
           ++   D    V +  AL+ MY +C  + YA+ +F+++ +  VVSW+ MI    R  E + 
Sbjct: 151 LKKGLDRD--VFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDM 208

Query: 259 GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF--EFSLAMANAL 316
            + L  EM    V PSE+ ++S++        +++GK +HAY++RN       +    AL
Sbjct: 209 ALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTAL 268

Query: 317 VDMYGKC-------------------------------REIRSARTLFDGMKSKDVMIWN 345
           +DMY KC                                 +  AR LFD  +++DVMIW 
Sbjct: 269 LDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWT 328

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
           A++SAYAQA+CID+AF LF  M+ S VRP +VT+V LLSLC  AGAL++GKW+H+YI+K+
Sbjct: 329 AMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE 388

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
            +EVD IL TALVDMYAKCGD+N A RLF EAI RDICMWNA++ G+ MHG GEEAL  F
Sbjct: 389 RVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIF 448

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
            +MER GVKPN ITFIGLL+ACSHAGLVTEGK +F+KMVH  GLVP+IEHYGCMVDLLGR
Sbjct: 449 AEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGR 508

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLM 585
           AGLLDEAHEMIKSMP++PN IVWGAL+AA +LHKNP +GE+AATQ+LEIEP+N GYNVLM
Sbjct: 509 AGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLM 568

Query: 586 SNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           SNIYA ANRW+D AGVR+ MK + +KKEPG S +EVNG VH+F+ G
Sbjct: 569 SNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMG 614



 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/508 (42%), Positives = 305/508 (60%), Gaps = 51/508 (10%)

Query: 9   NLEQTRQCHAHIIKTHFKFS-------YTNIINPLTRYNSLVTSYIKNNKPSSALNIYAF 61
            LEQT+Q HAHIIKTHF  +       + + ++P  ++N ++TSY K N+P +ALN+YA 
Sbjct: 55  TLEQTKQIHAHIIKTHFHHALQIPLNDFPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQ 114

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           +RK   EVDNF  P++LKAC QV  T LGKEIHGF +K GLD D +V NAL+ MY EC  
Sbjct: 115 LRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECAC 174

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           +  AR +FD+M  RDVVSWSTMIR   R    + ALE++REM FM +RPSEVAM+SMV+L
Sbjct: 175 VEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNL 234

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
           FAD A++ +GKA+HA V+RN  +E +GV   TAL+DMY+KCG+L  A+QLFN L Q +VV
Sbjct: 235 FADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVV 294

Query: 242 SWTVMISGYIRCNE-------------------------------INEGVRLFAEMIEEN 270
           SWT MI+G IR N                                I++   LF +M    
Sbjct: 295 SWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSG 354

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           V P+++TI+SL+  C   G L LGKW+H+YI +   E    +  ALVDMY KC +I +A 
Sbjct: 355 VRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAG 414

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            LF    S+D+ +WNA+I+ +A     ++A ++F  M+   V+PN++T +GLL  C+ AG
Sbjct: 415 RLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAG 474

Query: 391 ALEMGKWL-----HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICM 444
            +  GK L     HT+    GL   +     +VD+  + G ++ A+ +  S  I  +  +
Sbjct: 475 LVTEGKKLFEKMVHTF----GLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIV 530

Query: 445 WNAMMAGYGMHG---CGEEALIFFVDME 469
           W A++A   +H     GE A    +++E
Sbjct: 531 WGALVAACRLHKNPQLGELAATQLLEIE 558


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 255/629 (40%), Positives = 377/629 (59%), Gaps = 4/629 (0%)

Query: 10  LEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV 69
           ++ TR+  A   +T  +F+ T+I N    +   +  Y+KN   + AL +Y  M++ G   
Sbjct: 61  VKTTREVSACANQT--QFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINP 118

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF 129
           D     +++KAC        G+++H   I  G + D  V  AL  MY++CGSL +AR +F
Sbjct: 119 DKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVF 178

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           D MP RDVVSW+ +I GY + G P EAL +  EM+   I+P+   ++S++ + A +  ++
Sbjct: 179 DRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALE 238

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
            GK IH   +R+  +    V +   L++MY+KCGN+  A +LF R+    V SW  +I G
Sbjct: 239 QGKQIHCYAIRSGIESD--VLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGG 296

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
           Y   ++ +E +  F  M    + P+ IT++S++  C  +  L+ G+ +H Y +R+GFE +
Sbjct: 297 YSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESN 356

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
             + NALV+MY KC  + SA  LF+ M  K+V+ WNA+IS Y+Q     +A  LFI M+ 
Sbjct: 357 DVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQA 416

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
             ++P+   +V +L  C    ALE GK +H Y  + G E +V++ T LVD+YAKCG+VN 
Sbjct: 417 QGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNT 476

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A +LF     +D+  W  M+  YG+HG GE+AL  F  M+ +G K + I F  +L ACSH
Sbjct: 477 AQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSH 536

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           AGLV +G   F  M    GL PK+EHY C+VDLLGRAG LDEA+ +IK+M L P+  VWG
Sbjct: 537 AGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWG 596

Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR 609
           ALL A ++H N  +GE AA  + E++P N GY VL+SNIYA A RW DVA +R++MKE  
Sbjct: 597 ALLGACRIHCNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKG 656

Query: 610 VKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           VKK+PG S V V+  V  F+ G   + +S
Sbjct: 657 VKKQPGCSVVAVHRDVQTFLVGDRTHPQS 685


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 242/663 (36%), Positives = 378/663 (57%), Gaps = 70/663 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+ + +K   P   L  Y  M   G  +D  T   ++ AC +     LG E+HG  +
Sbjct: 101 WNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRIL 160

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   +  ++N L+ +YS+CG L     LF++M +RDV+SW+TMI  Y   G+  EAL+
Sbjct: 161 KCGFGRNKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALD 220

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV--AIATALI 216
           +  EM    + P E+ M+S+VS  A + D+++GK +H  +V    D KL +  ++   L+
Sbjct: 221 LFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIV----DNKLWIRGSLLNCLV 276

Query: 217 DMYSKCGNLA---------------------------------YAKQLFNRLNQNSVVSW 243
           DMYSKCG +                                   A+QLF+++N+ S+VSW
Sbjct: 277 DMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSW 336

Query: 244 TVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
           T M+SGY++     E + LF +M  ENV P E+ +++++  C  +    LG+ +HA+I+ 
Sbjct: 337 TTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVT 396

Query: 304 NGFEFSLAMANALVDMYGKCRE-------------------------------IRSARTL 332
            G      + NAL+D+Y KC +                               +  AR  
Sbjct: 397 YGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDF 456

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ +  KD++ WN +++AY +    +++FE+F  M+ S V+P++ T++ LLS C + GAL
Sbjct: 457 FNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGAL 516

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
             G W++ YIEK  + +D +L TAL+DMY KCG V  AY +F++ I +++ +W AMMA Y
Sbjct: 517 NHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAY 576

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
            M G   EA+  +++ME  GVKP+ +TFI LL ACSH GLV EG   F+K+     ++P 
Sbjct: 577 AMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPT 636

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           I HYGCMVDLLGR G L+E  + I+ MP+ P++ +W +L+ A + H N  + E A  Q++
Sbjct: 637 IHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLI 696

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
           EI+P N G +VL+SNIYA A RW+DV+ VR  + E  V K+PGF+ +E NG+VH+F+   
Sbjct: 697 EIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFVASN 756

Query: 633 MVN 635
           +V+
Sbjct: 757 LVS 759



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/548 (26%), Positives = 241/548 (43%), Gaps = 77/548 (14%)

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           I  +LK+C+ +        IH   I   L  D  +++ ++       +L  A  +     
Sbjct: 38  IIDLLKSCSNI---REFSPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQILSYSH 94

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
             + + W+T++    + G P+E LE    M    +         ++       DV LG  
Sbjct: 95  EPESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSE 154

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           +H  +++ C   +   ++   L+ +YSKCG L    QLF ++    V+SW  MIS Y+  
Sbjct: 155 VHGRILK-CGFGR-NKSLNNNLMGLYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLK 212

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
               E + LF EM+   V P EIT++SL+  C  +  L++GK LH YI+ N      ++ 
Sbjct: 213 GMYREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLL 272

Query: 314 NALVDMYGKC---------------------------------REIRSARTLFDGMKSKD 340
           N LVDMY KC                                  +I  AR LFD M  + 
Sbjct: 273 NCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERS 332

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           ++ W  ++S Y Q     ++ ELF  M+   V P+EV +V +LS C      ++G+ +H 
Sbjct: 333 LVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHA 392

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYR---------------------------- 432
           +I   G+ VD  L  AL+D+YAKCG ++ A R                            
Sbjct: 393 FIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDK 452

Query: 433 ---LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
               F++   +DI  WN M+  Y  H    E+   F  M+ S VKP+  T I LL++C+ 
Sbjct: 453 ARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAK 512

Query: 490 AGLVTEGKSV---FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
            G +  G  V    +K   G+  +        ++D+ G+ G ++ A+E+   + +  N+ 
Sbjct: 513 VGALNHGIWVNVYIEKNEIGIDAMLGT----ALIDMYGKCGCVEMAYEIFTQI-IEKNVF 567

Query: 547 VWGALLAA 554
           VW A++AA
Sbjct: 568 VWTAMMAA 575



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 175/363 (48%), Gaps = 37/363 (10%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + ++++ Y++      +L ++  MR      D   + T+L AC  +    LG+ +H 
Sbjct: 333 LVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHA 392

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVS------------------------------- 124
           F +  G+  D ++ NAL+ +Y++CG L                                 
Sbjct: 393 FIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDK 452

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           AR  F+++P +D+VSW+TM+  Y +  L  E+ E+  +M+  +++P +  +IS++S  A 
Sbjct: 453 ARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAK 512

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
           V  ++ G  ++  + +N  +  +   + TALIDMY KCG +  A ++F ++ + +V  WT
Sbjct: 513 VGALNHGIWVNVYIEKN--EIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWT 570

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
            M++ Y    +  E + L+ EM E  V P  +T ++L+  C   GGL    + +   LR+
Sbjct: 571 AMMAAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSH-GGLVDEGYKYFNKLRS 629

Query: 305 GFEF--SLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISAYAQAHCIDKAF 361
            +    ++     +VD+ G+   +       + M    DV IW++++ A    H ++ A 
Sbjct: 630 FYNIIPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAE 689

Query: 362 ELF 364
           + F
Sbjct: 690 QAF 692



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/234 (22%), Positives = 116/234 (49%), Gaps = 2/234 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N++V +Y+K++  + +  I+  M+ +  + D  T+ ++L +CA+V   + G  ++ 
Sbjct: 465 IVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNV 524

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +  KN +  DA +  ALI MY +CG +  A  +F ++  ++V  W+ M+  Y   G   E
Sbjct: 525 YIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALE 584

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+++  EM    ++P  V  I++++  +    VD G   +   +R+  +    +     +
Sbjct: 585 AIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYK-YFNKLRSFYNIIPTIHHYGCM 643

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVS-WTVMISGYIRCNEINEGVRLFAEMIE 268
           +D+  + G+L    +   R+     VS W+ ++      + +    + F ++IE
Sbjct: 644 VDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIE 697


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/634 (38%), Positives = 378/634 (59%), Gaps = 16/634 (2%)

Query: 19  HIIKTHFKFSYTNIINPLTR-YNSLVTSYIKNNKPSSA--LNIYAFMRKNGSEVDNFTIP 75
           H+ + H  F    I +P  R YN L+ +Y  ++  ++A  L++Y  M ++    +N+T P
Sbjct: 72  HLSRAHHLFD--QIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
             LKAC+ +   H G+ IH  AI  GL  D +VS AL+ MY +C  L  A ++F  MP R
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189

Query: 136 DVVSWSTMIRGYHRGGLPEEALE--VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
           D+V+W+ M+ GY   G+   A+   +  +M+   +RP+   +++++ L A    +  G +
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249

Query: 194 IHACVVRNC------KDEKL--GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           +HA  +R C         KL  GV + TAL+DMY+KCG+L YA+++F+ +   + V+W+ 
Sbjct: 250 VHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSA 309

Query: 246 MISGYIRCNEINEGVRLFAEMIEENV-FPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
           +I G++ C+ + +   LF  M+ + + F S  +I S +  C  +  L++G+ LHA + ++
Sbjct: 310 LIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS 369

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
           G    L   N+L+ MY K   I  A  LFD M  KD + ++A++S Y Q    ++AF +F
Sbjct: 370 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF 429

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC 424
             M+   V P+  TMV L+  C+   AL+ G+  H  +  +GL  +  +  AL+DMYAKC
Sbjct: 430 KKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKC 489

Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
           G ++ + ++F+    RDI  WN M+AGYG+HG G+EA   F++M   G  P+G+TFI LL
Sbjct: 490 GRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 549

Query: 485 NACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
           +ACSH+GLV EGK  F  M HG GL P++EHY CMVDLL R G LDEA+E I+SMPLR +
Sbjct: 550 SACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRAD 609

Query: 545 MIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRV 604
           + VW ALL A +++KN  +G+  +  I E+ P+  G  VL+SNIY+ A R+++ A VR +
Sbjct: 610 VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRII 669

Query: 605 MKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
            K    KK PG S +E+NG +H F+ G   + +S
Sbjct: 670 QKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQS 703



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 227/477 (47%), Gaps = 24/477 (5%)

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA--LEVMREMRFMDIRPSEVAMIS 177
           G L  A +LFD++P+ DV +++ +IR Y        A  L + R M    + P+      
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
            +   + +AD   G+AIH   +       L V  +TAL+DMY KC  L  A  +F  +  
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFV--STALLDMYVKCACLPDAAHIFATMPA 188

Query: 238 NSVVSWTVMISGYIRCNEINEGVR--LFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
             +V+W  M++GY      +  V   L  +M    + P+  T+++L+      G L  G 
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 248

Query: 296 WLHAYILR----------NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
            +HAY +R          +     + +  AL+DMY KC  +  AR +FD M +++ + W+
Sbjct: 249 SVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWS 308

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKV-RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK 404
           A+I  +     + +AF LF  M    +   +  ++   L  C     L MG+ LH  + K
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAK 368

Query: 405 QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIF 464
            G+  D+    +L+ MYAK G ++ A  LF E   +D   ++A+++GY  +G  EEA + 
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 428

Query: 465 FVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLG 524
           F  M+   V+P+  T + L+ ACSH   +  G+     ++   GL  +      ++D+  
Sbjct: 429 FKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLASETSICNALIDMYA 487

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGY 581
           + G +D + ++   MP R +++ W  ++A   +H    +G+ A    LE+   N G+
Sbjct: 488 KCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIH---GLGKEATALFLEMN--NLGF 538


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/634 (38%), Positives = 378/634 (59%), Gaps = 16/634 (2%)

Query: 19  HIIKTHFKFSYTNIINPLTR-YNSLVTSYIKNNKPSSA--LNIYAFMRKNGSEVDNFTIP 75
           H+ + H  F    I +P  R YN L+ +Y  ++  ++A  L++Y  M ++    +N+T P
Sbjct: 72  HLSRAHHLFD--QIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
             LKAC+ +   H G+ IH  AI  GL  D +VS AL+ MY +C  L  A ++F  MP R
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189

Query: 136 DVVSWSTMIRGYHRGGLPEEALE--VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
           D+V+W+ M+ GY   G+   A+   +  +M+   +RP+   +++++ L A    +  G +
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249

Query: 194 IHACVVRNC------KDEKL--GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           +HA  +R C         KL  GV + TAL+DMY+KCG+L YA+++F+ +   + V+W+ 
Sbjct: 250 VHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWSA 309

Query: 246 MISGYIRCNEINEGVRLFAEMIEENV-FPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
           +I G++ C+ + +   LF  M+ + + F S  +I S +  C  +  L++G+ LHA + ++
Sbjct: 310 LIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAKS 369

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
           G    L   N+L+ MY K   I  A  LFD M  KD + ++A++S Y Q    ++AF +F
Sbjct: 370 GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLVF 429

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC 424
             M+   V P+  TMV L+  C+   AL+ G+  H  +  +GL  +  +  AL+DMYAKC
Sbjct: 430 KKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALIDMYAKC 489

Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
           G ++ + ++F+    RDI  WN M+AGYG+HG G+EA   F++M   G  P+G+TFI LL
Sbjct: 490 GRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGVTFICLL 549

Query: 485 NACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
           +ACSH+GLV EGK  F  M HG GL P++EHY CMVDLL R G LDEA+E I+SMPLR +
Sbjct: 550 SACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQSMPLRAD 609

Query: 545 MIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRV 604
           + VW ALL A +++KN  +G+  +  I E+ P+  G  VL+SNIY+ A R+++ A VR +
Sbjct: 610 VRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEAAEVRII 669

Query: 605 MKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
            K    KK PG S +E+NG +H F+ G   + +S
Sbjct: 670 QKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQS 703



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 227/477 (47%), Gaps = 24/477 (5%)

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA--LEVMREMRFMDIRPSEVAMIS 177
           G L  A +LFD++P+ DV +++ +IR Y        A  L + R M    + P+      
Sbjct: 71  GHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFPF 130

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
            +   + +AD   G+AIH   +       L V  +TAL+DMY KC  L  A  +F  +  
Sbjct: 131 ALKACSALADHHCGRAIHRHAIHAGLQADLFV--STALLDMYVKCACLPDAAHIFATMPA 188

Query: 238 NSVVSWTVMISGYIRCNEINEGVR--LFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
             +V+W  M++GY      +  V   L  +M    + P+  T+++L+      G L  G 
Sbjct: 189 RDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGT 248

Query: 296 WLHAYILR----------NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
            +HAY +R          +     + +  AL+DMY KC  +  AR +FD M +++ + W+
Sbjct: 249 SVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEVTWS 308

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKV-RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK 404
           A+I  +     + +AF LF  M    +   +  ++   L  C     L MG+ LH  + K
Sbjct: 309 ALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLHALLAK 368

Query: 405 QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIF 464
            G+  D+    +L+ MYAK G ++ A  LF E   +D   ++A+++GY  +G  EEA + 
Sbjct: 369 SGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAEEAFLV 428

Query: 465 FVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLG 524
           F  M+   V+P+  T + L+ ACSH   +  G+     ++   GL  +      ++D+  
Sbjct: 429 FKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI-IRGLASETSICNALIDMYA 487

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGY 581
           + G +D + ++   MP R +++ W  ++A   +H    +G+ A    LE+   N G+
Sbjct: 488 KCGRIDLSRQVFNMMPSR-DIVSWNTMIAGYGIH---GLGKEATALFLEMN--NLGF 538


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  460 bits (1184), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 246/631 (38%), Positives = 368/631 (58%), Gaps = 41/631 (6%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  YN L+  Y        A+ +Y  M   G   D +T P +L AC+++L    G ++HG
Sbjct: 95  LFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHG 154

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K GL+GD +VSN+LI  Y+ECG +   R LFD M  R+VVSW+++I GY    L +E
Sbjct: 155 AVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKE 214

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT-- 213
           A+ +  +M    + P+ V M+ ++S  A + D++LGK + + +       +LG+ ++T  
Sbjct: 215 AVSLFFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYI------SELGMELSTIM 268

Query: 214 --ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
             AL+DMY KCG++  A+Q+F+     ++V +  ++S Y+     ++ + +  EM+++  
Sbjct: 269 VNALVDMYMKCGDICAARQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGP 328

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC--RE---- 325
            P ++T+LS I  C  +G L +GK  HAY+LRNG E    ++NA++DMY KC  RE    
Sbjct: 329 RPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACK 388

Query: 326 -------------------------IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
                                    +  A  +FD M  +D++ WN +I A  Q    ++A
Sbjct: 389 VFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEA 448

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
            ELF  M+   +  + VTMVG+ S C   GAL++ KW+ TYIEK  + VD+ L TALVDM
Sbjct: 449 IELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDM 508

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           +++CGD + A  +F     RD+  W A +    M G  E A+  F +M    VKP+ + F
Sbjct: 509 FSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVF 568

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
           + LL ACSH G V +G+ +F  M    G+ P I HYGCMVDLLGRAGLL+EA ++I+SMP
Sbjct: 569 VALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMP 628

Query: 541 LRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAG 600
           + PN +VWG+LLAA + HKN  +   AA ++ ++ P+  G +VL+SNIYA A +W DVA 
Sbjct: 629 IEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVLLSNIYASAGKWTDVAR 688

Query: 601 VRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           VR  MKE  V+K PG SS+EV GL+H+F  G
Sbjct: 689 VRLQMKEKGVQKVPGSSSIEVQGLIHEFTSG 719



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 154/579 (26%), Positives = 272/579 (46%), Gaps = 56/579 (9%)

Query: 52  PSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSN- 110
           PSS L + A + K  + +   +   +L  C  +      K++H   +K GL      SN 
Sbjct: 7   PSSTLLVPASL-KEANPITRNSSSKLLVNCKTLKEL---KQLHCDMMKKGLLCHKPASNL 62

Query: 111 -ALIQMYSECGSLVSARYLFDEMPNRD-----VVSWSTMIRGYHRGGLPEEALEVMREMR 164
             LI    + G+L S  Y  +   + D     +  ++ +IRGY   GL ++A+ +  +M 
Sbjct: 63  NKLIASSVQIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQML 122

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYS 220
            M I P +     ++S  + +  +  G  +H  V+      K+G    + ++ +LI  Y+
Sbjct: 123 VMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVL------KMGLEGDIFVSNSLIHFYA 176

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           +CG +   ++LF+ + + +VVSWT +I+GY   +   E V LF +M E  V P+ +T++ 
Sbjct: 177 ECGKVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVC 236

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           +I  C  +  L+LGK + +YI   G E S  M NALVDMY KC +I +AR +FD   +K+
Sbjct: 237 VISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDECANKN 296

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           ++++N ++S Y           +   M     RP++VTM+  ++ C + G L +GK  H 
Sbjct: 297 LVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHA 356

Query: 401 YIEKQGLEVDVILKTALVDMYAKC-------------------------------GDVNG 429
           Y+ + GLE    +  A++DMY KC                               GD+  
Sbjct: 357 YVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMEL 416

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A+R+F E + RD+  WN M+         EEA+  F +M+  G+  + +T +G+ +AC +
Sbjct: 417 AWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGY 476

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
            G +   K V    +    +   ++    +VD+  R G    A  + K M  R ++  W 
Sbjct: 477 LGALDLAKWVC-TYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKR-DVSAWT 534

Query: 550 ALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMS 586
           A +    +  N         ++LE  ++P +  +  L++
Sbjct: 535 AAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLT 573


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/605 (38%), Positives = 364/605 (60%), Gaps = 4/605 (0%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  I NP +  +N ++ +Y  N     A+++Y  M   G   + +T P +LKAC+ +L  
Sbjct: 66  FDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAI 125

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
             G EIH  A   GL+ D +V  AL+  Y++CG LV A+ LF  M +RDVV+W+ MI G 
Sbjct: 126 EDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGC 185

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
              GL ++A++++ +M+   I P+   ++ ++    +   +  GKA+H   VR   D   
Sbjct: 186 SLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDN-- 243

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
           GV + T L+DMY+KC  L YA+++F+ +   + VSW+ MI GY+  + + E + LF +MI
Sbjct: 244 GVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMI 303

Query: 268 EENVF-PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
            ++   P+ +T+ S++  C  +  L  G+ LH YI++ G    + + N L+ MY KC  I
Sbjct: 304 LKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVI 363

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             A   FD M  KD + ++A++S   Q      A  +F  M++S + P+  TM+G+L  C
Sbjct: 364 DDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPAC 423

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
           +   AL+ G   H Y+  +G   D ++  AL+DMY+KCG ++ A  +F+     DI  WN
Sbjct: 424 SHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWN 483

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           AM+ GYG+HG G EAL  F D+   G+KP+ ITFI LL++CSH+GLV EG+  FD M   
Sbjct: 484 AMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRD 543

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
             +VP++EH  CMVD+LGRAGL+DEAH  I++MP  P++ +W ALL+A ++HKN  +GE 
Sbjct: 544 FSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEE 603

Query: 567 AATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVH 626
            + +I  + P++ G  VL+SNIY+ A RW+D A +R   K+  +KK PG S +E+NG+VH
Sbjct: 604 VSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVH 663

Query: 627 KFIRG 631
            F+ G
Sbjct: 664 AFVGG 668



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 152/514 (29%), Positives = 264/514 (51%), Gaps = 7/514 (1%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +L+AC Q       K+IH   +KN  + D+ V + L ++Y  C  +V AR LFDE+PN  
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           V+ W+ +IR Y   G  + A+++   M  + +RP++     ++   + +  ++ G  IH+
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
                  +    V + TAL+D Y+KCG L  A++LF+ ++   VV+W  MI+G       
Sbjct: 134 HAKMFGLESD--VFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
           ++ V+L  +M EE + P+  TI+ ++   G    L  GK LH Y +R  F+  + +   L
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGL 251

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPN 375
           +DMY KC+ +  AR +FD M  ++ + W+A+I  Y  + C+ +A ELF  M +   + P 
Sbjct: 252 LDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPT 311

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
            VT+  +L  C +   L  G+ LH YI K G  +D++L   L+ MYAKCG ++ A R F 
Sbjct: 312 PVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRFFD 371

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
               +D   ++A+++G   +G    AL  F  M+ SG+ P+  T +G+L ACSH   +  
Sbjct: 372 XMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQH 431

Query: 496 GKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAAS 555
           G      ++   G          ++D+  + G +  A E+   M  R +++ W A++   
Sbjct: 432 GFCSHGYLI-VRGFATDTLICNALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGY 489

Query: 556 KLH--KNPSMGEIAATQILEIEPQNYGYNVLMSN 587
            +H     ++G       L ++P +  +  L+S+
Sbjct: 490 GIHGLGMEALGLFHDLLALGLKPDDITFICLLSS 523



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 145/285 (50%), Gaps = 20/285 (7%)

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           L L+  C     L   K +H + L+N      ++ + L  +Y  C ++  AR LFD + +
Sbjct: 12  LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
             V++WN +I AYA     D A +L+  M    VRPN+ T   +L  C+   A+E G  +
Sbjct: 72  PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H++ +  GLE DV + TALVD YAKCG +  A RLFS   +RD+  WNAM+AG  ++G  
Sbjct: 132 HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV--------FDK-MVHGLGL 509
           ++A+   + M+  G+ PN  T +G+L     A  +  GK++        FD  +V G GL
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGL 251

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
                     +D+  +   L  A ++   M +R N + W A++  
Sbjct: 252 ----------LDMYAKCQCLLYARKIFDVMGVR-NEVSWSAMIGG 285


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/605 (38%), Positives = 364/605 (60%), Gaps = 4/605 (0%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  I NP +  +N ++ +Y  N     A+++Y  M   G   + +T P +LKAC+ +L  
Sbjct: 66  FDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAI 125

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
             G EIH  A   GL+ D +V  AL+  Y++CG LV A+ LF  M +RDVV+W+ MI G 
Sbjct: 126 EDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGC 185

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
              GL ++A++++ +M+   I P+   ++ ++    +   +  GKA+H   VR   D   
Sbjct: 186 SLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDN-- 243

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
           GV + T L+DMY+KC  L YA+++F+ +   + VSW+ MI GY+  + + E + LF +MI
Sbjct: 244 GVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMI 303

Query: 268 EENVF-PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
            ++   P+ +T+ S++  C  +  L  G+ LH YI++ G    + + N L+ MY KC  I
Sbjct: 304 LKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVI 363

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             A   FD M  KD + ++A++S   Q      A  +F  M++S + P+  TM+G+L  C
Sbjct: 364 DDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPAC 423

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
           +   AL+ G   H Y+  +G   D ++  AL+DMY+KCG ++ A  +F+     DI  WN
Sbjct: 424 SHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWN 483

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           AM+ GYG+HG G EAL  F D+   G+KP+ ITFI LL++CSH+GLV EG+  FD M   
Sbjct: 484 AMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRD 543

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
             +VP++EH  CMVD+LGRAGL+DEAH  I++MP  P++ +W ALL+A ++HKN  +GE 
Sbjct: 544 FSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEE 603

Query: 567 AATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVH 626
            + +I  + P++ G  VL+SNIY+ A RW+D A +R   K+  +KK PG S +E+NG+VH
Sbjct: 604 VSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGIVH 663

Query: 627 KFIRG 631
            F+ G
Sbjct: 664 AFVGG 668



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 153/514 (29%), Positives = 265/514 (51%), Gaps = 7/514 (1%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +L+AC Q       K+IH   +KN  + D+ V + L ++Y  C  +V AR LFDE+PN  
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           V+ W+ +IR Y   G  + A+++   M  + +RP++     ++   + +  ++ G  IH+
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
                  +    V + TAL+D Y+KCG L  A++LF+ ++   VV+W  MI+G       
Sbjct: 134 HAKMFGLESD--VFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
           ++ V+L  +M EE + P+  TI+ ++   G    L  GK LH Y +R  F+  + +   L
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGL 251

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPN 375
           +DMY KC+ +  AR +FD M  ++ + W+A+I  Y  + C+ +A ELF  M +   + P 
Sbjct: 252 LDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPT 311

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
            VT+  +L  C +   L  G+ LH YI K G  +D++L   L+ MYAKCG ++ A R F 
Sbjct: 312 PVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFD 371

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
           E   +D   ++A+++G   +G    AL  F  M+ SG+ P+  T +G+L ACSH   +  
Sbjct: 372 EMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAALQH 431

Query: 496 GKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAAS 555
           G      ++   G          ++D+  + G +  A E+   M  R +++ W A++   
Sbjct: 432 GFCSHGYLI-VRGFATDTLICNALIDMYSKCGKISFAREVFNRMD-RHDIVSWNAMIIGY 489

Query: 556 KLH--KNPSMGEIAATQILEIEPQNYGYNVLMSN 587
            +H     ++G       L ++P +  +  L+S+
Sbjct: 490 GIHGLGMEALGLFHDLLALGLKPDDITFICLLSS 523



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 145/285 (50%), Gaps = 20/285 (7%)

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           L L+  C     L   K +H + L+N      ++ + L  +Y  C ++  AR LFD + +
Sbjct: 12  LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
             V++WN +I AYA     D A +L+  M    VRPN+ T   +L  C+   A+E G  +
Sbjct: 72  PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H++ +  GLE DV + TALVD YAKCG +  A RLFS   +RD+  WNAM+AG  ++G  
Sbjct: 132 HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV--------FDK-MVHGLGL 509
           ++A+   + M+  G+ PN  T +G+L     A  +  GK++        FD  +V G GL
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGL 251

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
                     +D+  +   L  A ++   M +R N + W A++  
Sbjct: 252 ----------LDMYAKCQCLLYARKIFDVMGVR-NEVSWSAMIGG 285


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/591 (39%), Positives = 358/591 (60%), Gaps = 5/591 (0%)

Query: 51  KPSSALNIYAFMR---KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAY 107
           K    +N +   R   + G+  DN+T+P +++AC  +    +G+ IH    K GLD D +
Sbjct: 7   KVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHF 66

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           V  AL+ MY +C  +  AR+LFD+M  RD+V+W+ MI GY   G   E+L +  +MR   
Sbjct: 67  VCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEG 126

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
           + P +VAM+++V   A +  +   + I   + R  K  +L V + TA+IDMY+KCG +  
Sbjct: 127 VVPDKVAMVTVVFACAKLGAMHKARIIDDYIQR--KKFQLDVILGTAMIDMYAKCGCVES 184

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A+++F+R+ + +V+SW+ MI+ Y    +  + + LF  M+   + P +IT+ SL+  C  
Sbjct: 185 AREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSD 244

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
           +  LQ+G+ +H  + + G +    +  ALVDMYGKCREI  AR LFD M  +D++ W  +
Sbjct: 245 LKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVM 304

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           I  YA+    +++  LF  M+   V P++V MV ++  C + GA+   + +  YI+++  
Sbjct: 305 IGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKF 364

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
           ++DVIL TA++DM+AKCG V  A  +F     +++  W+AM+A YG HG G +AL  F  
Sbjct: 365 QLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPM 424

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           M RSG+ PN IT + LL ACSHAGLV EG   F  M     +   ++HY C+VDLLGRAG
Sbjct: 425 MLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAG 484

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSN 587
            LDEA ++I+SM +  +  +WGA L A + HK+  + E AAT +LE++PQN G+ +L+SN
Sbjct: 485 RLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSN 544

Query: 588 IYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           IYA A RW DVA  R +M + R+KK PG++ +EV+   H+F  G   + +S
Sbjct: 545 IYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRS 595



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 230/422 (54%), Gaps = 4/422 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +  ++  Y +  K + +L ++  MR+ G   D   + T++ ACA++   H  + I  
Sbjct: 96  LVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDD 155

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +  +     D  +  A+I MY++CG + SAR +FD M  ++V+SWS MI  Y   G   +
Sbjct: 156 YIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRK 215

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL++ R M    + P ++ + S++   +D+ ++ +G+ IH  V +   D  L   +  AL
Sbjct: 216 ALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLD--LDHFVCAAL 273

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY KC  +  A+ LF+++ +  +V+WTVMI GY  C   NE + LF +M EE V P +
Sbjct: 274 VDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDK 333

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           + +++++  C  +G +   + +  YI R  F+  + +  A++DM+ KC  + SAR +FD 
Sbjct: 334 VAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDR 393

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M+ K+V+ W+A+I+AY       KA +LF  M  S + PN++T+V LL  C+ AG +E G
Sbjct: 394 MEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEG 453

Query: 396 -KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYG 453
            ++     E   +  DV   T +VD+  + G ++ A +L  S  + +D  +W A +    
Sbjct: 454 LRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACR 513

Query: 454 MH 455
            H
Sbjct: 514 TH 515



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 222/416 (53%), Gaps = 4/416 (0%)

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           M+ G+ + G         RE+     RP    +  ++    D+ ++ +G+ IH  V +  
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
            D  L   +  AL+DMY KC  +  A+ LF+++ +  +V+WTVMI GY  C + NE + L
Sbjct: 61  LD--LDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVL 118

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F +M EE V P ++ +++++  C  +G +   + +  YI R  F+  + +  A++DMY K
Sbjct: 119 FEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAK 178

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C  + SAR +FD M+ K+V+ W+A+I+AY       KA +LF  M  S + P+++T+  L
Sbjct: 179 CGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASL 238

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           L  C++   L+MG+ +H  + K GL++D  +  ALVDMY KC ++  A  LF +   RD+
Sbjct: 239 LYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDL 298

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             W  M+ GY   G   E+L+ F  M   GV P+ +  + ++ AC+  G + + +++ D 
Sbjct: 299 VTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTI-DD 357

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            +        +     M+D+  + G ++ A E+   M    N+I W A++AA   H
Sbjct: 358 YIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRME-EKNVISWSAMIAAYGYH 412


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 230/603 (38%), Positives = 360/603 (59%), Gaps = 4/603 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+L+ +Y       +     +  R+   + +N+T P +LKAC+ +L     + +H  A 
Sbjct: 97  YNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSALLDLRSARAVHCHAA 156

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + GL  D +VS AL+ +Y++C S   A  +F  MP RDVV+W+ M+ GY   G   + + 
Sbjct: 157 RAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAMLAGYALHGKYSDTIA 216

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK--DEKLGVAIATALI 216
            +  M+  D  P+   +++++ L A    +  G+A+HA  VR C   D K GV + TAL+
Sbjct: 217 CLLLMQ-DDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACSLHDHKDGVLVGTALL 275

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV-FPSE 275
           DMY+KCG+L YA ++F  +   + V+W+ ++ G++ C  + E   LF +M+ + + F S 
Sbjct: 276 DMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSP 335

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            ++ S +  C  +  L LGK LHA + ++G    L   N+L+ MY K   I  A TLFD 
Sbjct: 336 TSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMYAKAGLIDQATTLFDQ 395

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M  KD + ++A++S Y Q    D+AF +F  M+   V+P+  TMV L+  C+   AL+ G
Sbjct: 396 MVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHG 455

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           K  H  +  +G+  +  +  AL+DMYAKCG ++ + ++F     RDI  WN M+AGYG+H
Sbjct: 456 KCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIH 515

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G G+EA   F+DM+    +P+ +TFI L++ACSH+GLVTEGK  F  M H  G+ P++EH
Sbjct: 516 GLGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEH 575

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y  MVDLL R G LDEA++ I+ MPL+ ++ VWGALL A ++HKN  +G+  ++ I ++ 
Sbjct: 576 YIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALLGACRVHKNIDLGKQVSSMIQQLG 635

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
           P+  G  VL+SNI++ A R+++ A VR + KE   KK PG S +E+NG +H FI G   +
Sbjct: 636 PEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKKSPGCSWIEINGSLHAFIGGDRSH 695

Query: 636 WKS 638
            +S
Sbjct: 696 AQS 698



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 231/480 (48%), Gaps = 22/480 (4%)

Query: 119 CGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISM 178
           CG L  AR+LFD++P   +  ++ +IR Y   G            R    +P+      +
Sbjct: 76  CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135

Query: 179 VSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
           +   + + D+   +A+H    R      L V  +TAL+D+Y+KC +  +A  +F R+   
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFV--STALVDVYAKCASFRHAATVFRRMPAR 193

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
            VV+W  M++GY    + ++ +     M +++  P+  T+++L+      G L  G+ +H
Sbjct: 194 DVVAWNAMLAGYALHGKYSDTIACLLLMQDDHA-PNASTLVALLPLLAQHGALSQGRAVH 252

Query: 299 AYILR----NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
           AY +R    +  +  + +  AL+DMY KC  +  A  +F+ M  ++ + W+A++  +   
Sbjct: 253 AYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLC 312

Query: 355 HCIDKAFELFIHMKVSK---VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
             + +AF LF  M       + P  V     L  C     L +GK LH  + K GL  D+
Sbjct: 313 GRMLEAFSLFKDMLAQGLCFLSPTSVASA--LRACANLSDLCLGKQLHALLAKSGLHTDL 370

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
               +L+ MYAK G ++ A  LF + + +D   ++A+++GY  +G  +EA   F  M+  
Sbjct: 371 TAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQAC 430

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
            V+P+  T + L+ ACSH   +  GK     ++   G+  +      ++D+  + G +D 
Sbjct: 431 NVQPDVATMVSLIPACSHLAALQHGKCGHGSVI-VRGIASETSICNALIDMYAKCGRIDL 489

Query: 532 AHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI-----EPQNYGYNVLMS 586
           + ++   MP R +++ W  ++A   +H    +G+ A    L++     EP +  +  L+S
Sbjct: 490 SRQIFDVMPAR-DIVSWNTMIAGYGIH---GLGKEATALFLDMKHQACEPDDVTFICLIS 545



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 88/161 (54%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           ++     Y++LV+ Y++N K   A  ++  M+    + D  T+ +++ AC+ +     GK
Sbjct: 397 VVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGK 456

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
             HG  I  G+  +  + NALI MY++CG +  +R +FD MP RD+VSW+TMI GY   G
Sbjct: 457 CGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHG 516

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           L +EA  +  +M+     P +V  I ++S  +    V  GK
Sbjct: 517 LGKEATALFLDMKHQACEPDDVTFICLISACSHSGLVTEGK 557


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/629 (38%), Positives = 356/629 (56%), Gaps = 34/629 (5%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           + L   NSL+  Y        A+ +Y  M   G   +++T P +L  C ++     G ++
Sbjct: 94  DALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQV 153

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG  +K GL+ D ++ N LI  Y+ECG +     +F+ M  R+VVSW+++I GY RG  P
Sbjct: 154 HGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRP 213

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           +EA+ +  EM    IRPS V M+ ++S  A + D+D+G+ +  C        KL   +  
Sbjct: 214 KEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERV--CAYIGELGLKLNKVMVN 271

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMY KCG +  AK+LF+     ++V +  ++S Y R     E + +  EM+++   P
Sbjct: 272 ALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRP 331

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR--------- 324
             +T+LS I     +  L  GK  H Y++RNG E   ++ N ++DMY KC          
Sbjct: 332 DRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVF 391

Query: 325 ----------------------EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
                                 ++ SA  +F+ +  ++ + WN +IS   Q    + A E
Sbjct: 392 DLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIE 451

Query: 363 LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYA 422
           LF  M+   ++ + VTM+G+ S C   GA E+ KW+HTYIEK G+  D+ L TALVDM+A
Sbjct: 452 LFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFA 511

Query: 423 KCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
           +CGD   A ++F++   RD+  W A +    M G GE A   F  M   GVKP+ + F+ 
Sbjct: 512 RCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQ 571

Query: 483 LLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
           +L ACSH G V +G  +F  M    G+ P+IEHYGCMVDLLGRAGLL EA ++IKSMP+ 
Sbjct: 572 VLTACSHGGQVEQGLHIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPME 630

Query: 543 PNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVR 602
           PN +VWG+LLAA ++HKN  M   AA +I E+ PQ  G +VL+SNIYA A +W DVA VR
Sbjct: 631 PNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVR 690

Query: 603 RVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             ++E  V+K PG SSV+VNG++H+F  G
Sbjct: 691 LNLREKGVRKVPGSSSVQVNGVIHEFTSG 719



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 238/475 (50%), Gaps = 48/475 (10%)

Query: 17  HAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPT 76
           H H  K     S  N+++    + SL+  Y + ++P  A++++  M + G    + T+  
Sbjct: 184 HGH--KVFEGMSERNVVS----WTSLICGYARGDRPKEAVSLFFEMVEAGIRPSSVTMVC 237

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           ++ ACA++    +G+ +  +  + GL  +  + NAL+ MY +CG++ +A+ LFDE  +R+
Sbjct: 238 VISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLFDECVDRN 297

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           +V ++T++  Y R GL  EAL ++ EM     RP  V M+S +S  A + D+  GK  H 
Sbjct: 298 LVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHG 357

Query: 197 CVVRNCKDEKLGV----AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
            V+RN      G+    +I   +IDMY KCG    A ++F+ ++  +VVSW  + +G+IR
Sbjct: 358 YVIRN------GLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIR 411

Query: 253 CNEI-------------------------------NEGVRLFAEMIEENVFPSEITILSL 281
             ++                                + + LF EM  E +    +T++ +
Sbjct: 412 NGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGI 471

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
              CG++G  +L KW+H YI +NG    + +  ALVDM+ +C + +SA  +F+ M  +DV
Sbjct: 472 ASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDV 531

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
             W A I   A     + A  LF  M +  V+P+ V  V +L+ C+  G +E G  + + 
Sbjct: 532 SAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSL 591

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMH 455
           +E  G+   +     +VD+  + G +  A+ L  S  +  +  +W +++A   +H
Sbjct: 592 MEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVH 646



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 142/509 (27%), Positives = 237/509 (46%), Gaps = 43/509 (8%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY------LFDEMPNRD--VVSWST 142
           K++H    KNGLD        L+   +E  S  S  Y      LF E    D  +   ++
Sbjct: 42  KQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNS 101

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           +IRGY   GL  EA+ +   M  + + P+      ++S    +A    G  +H  VV+  
Sbjct: 102 LIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMG 161

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
            +E   V I   LI  Y++CG++ +  ++F  +++ +VVSWT +I GY R +   E V L
Sbjct: 162 LEED--VFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSL 219

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F EM+E  + PS +T++ +I  C  +  L +G+ + AYI   G + +  M NALVDMY K
Sbjct: 220 FFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMK 279

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C  I +A+ LFD    ++++++N ++S YA+     +A  +   M     RP+ VTM+  
Sbjct: 280 CGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSA 339

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG----------------- 425
           +S   +   L  GK  H Y+ + GLE    +   ++DMY KCG                 
Sbjct: 340 ISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTV 399

Query: 426 --------------DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
                         DV  A+ +F++   R+   WN M++G       E+A+  F +M+  
Sbjct: 400 VSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGE 459

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
           G+K + +T +G+ +AC + G     K V    +   G+   +     +VD+  R G    
Sbjct: 460 GIKADRVTMMGIASACGYLGAPELAKWVH-TYIEKNGIPCDMRLNTALVDMFARCGDPQS 518

Query: 532 AHEMIKSMPLRPNMIVWGALLAASKLHKN 560
           A ++   M  R ++  W A +    +  N
Sbjct: 519 AMQVFNKMTER-DVSAWTAAIGTMAMEGN 546


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 235/650 (36%), Positives = 373/650 (57%), Gaps = 24/650 (3%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHFK--FSYTNIINPLTR------------YNSLVTSYIK 48
           IKNG  N         H+ +T     FS    IN   R            Y++++  Y K
Sbjct: 73  IKNGLYN--------EHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAK 124

Query: 49  NNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYV 108
           N+   +AL     MR +  +   +    +LK C        GKEIHG  I N    + + 
Sbjct: 125 NSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFA 184

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI 168
              ++ MY++C  +  A  +FD MP RD+VSW+T+I G+ + G  ++ALE++  M+    
Sbjct: 185 MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQ 244

Query: 169 RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYA 228
           RP  + +++++   ADV  + +GK+IH   +R     KL V I+TAL DMYSKCG++  A
Sbjct: 245 RPDSITLVTVLPAAADVGLLMVGKSIHGYAIR-AGFAKL-VNISTALADMYSKCGSVETA 302

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
           + +F+ ++Q +VVSW  M+ GY++  E  + + +F +M+EE + P+ +TI+  +  C  +
Sbjct: 303 RLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADL 362

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
           G L+ GK++H ++ +      +++ N+L+ MY KC+ +  A  +F+ +  +  + WNA+I
Sbjct: 363 GDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMI 422

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
             YAQ   + +A   F  MK   ++P+  TMV ++    E       KW+H  I +  L+
Sbjct: 423 LGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLD 482

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            ++ + TALVDMY+KCG ++ A +LF     R +  WNAM+ GYG HG G  AL  F  M
Sbjct: 483 KNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKM 542

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
           ++  V+PN IT++ +++ACSH+GLV EG   F  M    GL P ++HYG MVDLLGRAG 
Sbjct: 543 KKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGR 602

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNI 588
           + EA + I++MP+ P + V+GA+L A K+HKN  +GE AA ++ E+ P   GY+VL++NI
Sbjct: 603 IKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANI 662

Query: 589 YAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           YA  ++W+ VA VR+ M++  +KK PG S VE+   VH F  G   + +S
Sbjct: 663 YASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQS 712



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 245/475 (51%), Gaps = 15/475 (3%)

Query: 91  KEIH---GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
           KE+H      IKNGL  +      L+ ++S+ GS+  A  +F+ + ++    + TM++GY
Sbjct: 63  KELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGY 122

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
            +    E AL  +  MR+ D++P       ++ +  D AD+  GK IH  ++ N      
Sbjct: 123 AKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITN--SFAA 180

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            V   T +++MY+KC  +  A ++F+R+ +  +VSW  +I+G+ +     + + L   M 
Sbjct: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
           +E   P  IT+++++     VG L +GK +H Y +R GF   + ++ AL DMY KC  + 
Sbjct: 241 DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVE 300

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           +AR +FDGM  K V+ WN+++  Y Q    +KA  +F  M    + P  VT++  L  C 
Sbjct: 301 TARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACA 360

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
           + G LE GK++H ++++  L  D+ +  +L+ MY+KC  V+ A  +F+    R    WNA
Sbjct: 361 DLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNA 420

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           M+ GY  +G   EAL  F +M+  G+KP+  T + ++ A +   +         K +HGL
Sbjct: 421 MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHA-----KWIHGL 475

Query: 508 ----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
                L   I     +VD+  + G +  A ++   +  R ++I W A++     H
Sbjct: 476 IIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDR-HVITWNAMIDGYGTH 529



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 136/295 (46%), Gaps = 7/295 (2%)

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           +++NG          LV ++ K   I  A  +F+ +  K   +++ ++  YA+   ++ A
Sbjct: 72  VIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETA 131

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
                 M+   V+P       LL +C +   L+ GK +H  +       +V   T +V+M
Sbjct: 132 LAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNM 191

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           YAKC  ++ AY++F     RD+  WN ++AG+  +G  ++AL   + M+  G +P+ IT 
Sbjct: 192 YAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITL 251

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
           + +L A +  GL+  GKS+    +   G    +     + D+  + G ++ A  +   M 
Sbjct: 252 VTVLPAAADVGLLMVGKSIHGYAIRA-GFAKLVNISTALADMYSKCGSVETARLIFDGMD 310

Query: 541 LRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMSNIYAVAN 593
            +  ++ W +++     +  P        ++LE  I+P       +M  ++A A+
Sbjct: 311 QK-TVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGV---TIMEALHACAD 361


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 229/580 (39%), Positives = 351/580 (60%), Gaps = 11/580 (1%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF 129
           +N+T P  LKAC+ +   H G+ IH  AI  GL  D +VS AL+ MY +C  L  A ++F
Sbjct: 9   NNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIF 68

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALE--VMREMRFMDIRPSEVAMISMVSLFADVAD 187
             MP RD+V+W+ M+ GY   G+   A+   +  +M+   +RP+   +++++ L A    
Sbjct: 69  ATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGA 128

Query: 188 VDLGKAIHACVVRNC------KDEKL--GVAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
           +  G ++HA  +R C         KL  GV + TAL+DMY+KCG+L YA+++F+ +   +
Sbjct: 129 LAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARN 188

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENV-FPSEITILSLIIECGFVGGLQLGKWLH 298
            V+W+ +I G++ C+ + +   LF  M+ + + F S  +I S +  C  +  L++G+ LH
Sbjct: 189 EVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLH 248

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
           A + ++G    L   N+L+ MY K   I  A  LFD M  KD + ++A++S Y Q    +
Sbjct: 249 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 308

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALV 418
           +AF +F  M+   V P+  TMV L+  C+   AL+ G+  H  +  +GL  +  +  AL+
Sbjct: 309 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 368

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           DMYAKCG ++ + ++F+    RDI  WN M+AGYG+HG G+EA   F++M   G  P+G+
Sbjct: 369 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 428

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           TFI LL+ACSH+GLV EGK  F  M HG GL P++EHY CMVDLL R G LDEA+E I+S
Sbjct: 429 TFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 488

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDV 598
           MPLR ++ VW ALL A +++KN  +G+  +  I E+ P+  G  VL+SNIY+ A R+++ 
Sbjct: 489 MPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEA 548

Query: 599 AGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           A VR + K    KK PG S +E+NG +H F+ G   + +S
Sbjct: 549 AEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQS 588



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 145/303 (47%), Gaps = 19/303 (6%)

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M+   V P+  T    +  C  +     G+ +H + +  G +  L ++ AL+DMY KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE--LFIHMKVSKVRPNEVTMVGLL 383
           +  A  +F  M ++D++ WNA+++ YA       A    L + M++ ++RPN  T+V LL
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 384 SLCTEAGALEMGKWLHTYI----------EKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
            L  + GAL  G  +H Y            K  L   V+L TAL+DMYAKCG +  A R+
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG---VKPNGITFIGLLNACSHA 490
           F     R+   W+A++ G+ +     +A + F  M   G   + P  I     L AC+  
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASL 238

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
             +  G+ +   +    G+   +     ++ +  +AGL+D+A  +   M ++ + + + A
Sbjct: 239 DHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSA 296

Query: 551 LLA 553
           L++
Sbjct: 297 LVS 299



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 82/142 (57%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           Y++LV+ Y++N +   A  ++  M+    E D  T+ +++ AC+ +     G+  HG  I
Sbjct: 294 YSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI 353

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             GL  +  + NALI MY++CG +  +R +F+ MP+RD+VSW+TMI GY   GL +EA  
Sbjct: 354 IRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATA 413

Query: 159 VMREMRFMDIRPSEVAMISMVS 180
           +  EM  +   P  V  I ++S
Sbjct: 414 LFLEMNNLGFPPDGVTFICLLS 435


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 218/590 (36%), Positives = 359/590 (60%), Gaps = 2/590 (0%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           ++  Y K++   SAL+ ++ M+ +      +    +LK C        GKEIHG  I +G
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
              + +    ++ MY++C  +  A  +FD MP RD+V W+TMI GY + G  + AL ++ 
Sbjct: 61  FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
            M     RP  + ++S++   AD   + +G A+H  V+R    E L V ++TAL+DMYSK
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLR-AGFESL-VNVSTALVDMYSK 178

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
           CG+++ A+ +F+ ++  +VVSW  MI GY++  +    + +F +M++E V P+ +T++  
Sbjct: 179 CGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGA 238

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +  C  +G L+ GK++H  + +   +  +++ N+L+ MY KC+ +  A  +F  +++K +
Sbjct: 239 LHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTL 298

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           + WNA+I  YAQ  C+++A   F  M+   ++P+  TMV ++    E       KW+H  
Sbjct: 299 VSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGL 358

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
           + ++ L+ +V + TALVDMYAKCG ++ A +LF     R +  WNAM+ GYG HG G+ +
Sbjct: 359 VIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTS 418

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVD 521
           +  F +M++  +KPN ITF+  L+ACSH+GLV EG   F+ M    G+ P ++HYG MVD
Sbjct: 419 VELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVD 478

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGY 581
           LLGRAG L++A + I+ MP++P + V+GA+L A K+HKN  +GE AA +I ++ P + GY
Sbjct: 479 LLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGY 538

Query: 582 NVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +VL++NIYA A+ W  VA VR +M++  ++K PG S VE+   VH F  G
Sbjct: 539 HVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSG 588



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 148/482 (30%), Positives = 250/482 (51%), Gaps = 31/482 (6%)

Query: 9   NLEQTRQCHAHIIKTHFK---FSYTNIIN---------------------PLTRYNSLVT 44
           +L++ ++ H  +I + F    F+ T ++N                      L  +N++++
Sbjct: 45  DLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMIS 104

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
            Y +N     AL +   M + G   D+ TI +IL A A   +  +G  +HG+ ++ G + 
Sbjct: 105 GYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFES 164

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
              VS AL+ MYS+CGS+  AR +FD M +R VVSW++MI GY + G  E A+ + ++M 
Sbjct: 165 LVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKML 224

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
              ++P+ V ++  +   AD+ D++ GK +H  V +   D    V++  +LI MYSKC  
Sbjct: 225 DEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSD--VSVMNSLISMYSKCKR 282

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           +  A  +F  L   ++VSW  MI GY +   +NE +  F EM   N+ P   T++S+I  
Sbjct: 283 VDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPA 342

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
              +   +  KW+H  ++R   + ++ +  ALVDMY KC  I +AR LFD M ++ V+ W
Sbjct: 343 LAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITW 402

Query: 345 NAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK 404
           NA+I  Y        + ELF  MK   ++PN++T +  LS C+ +G +E G      ++K
Sbjct: 403 NAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKK 462

Query: 405 Q-GLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH---GCGE 459
             G+E  +    A+VD+  + G +N A+    +  I   I ++ AM+    +H     GE
Sbjct: 463 DYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGE 522

Query: 460 EA 461
           +A
Sbjct: 523 KA 524


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 229/580 (39%), Positives = 351/580 (60%), Gaps = 11/580 (1%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF 129
           +N+T P  LKAC+ +   H G+ IH  AI  GL  D +VS AL+ MY +C  L  A ++F
Sbjct: 9   NNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIF 68

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALE--VMREMRFMDIRPSEVAMISMVSLFADVAD 187
             MP RD+V+W+ M+ GY   G+   A+   +  +M+   +RP+   +++++ L A    
Sbjct: 69  ATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGA 128

Query: 188 VDLGKAIHACVVRNC------KDEKL--GVAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
           +  G ++HA  +R C         KL  GV + TAL+DMY+KCG+L YA+++F+ +   +
Sbjct: 129 LAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARN 188

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENV-FPSEITILSLIIECGFVGGLQLGKWLH 298
            V+W+ +I G++ C+ + +   LF  M+ + + F S  +I S +  C  +  L++G+ LH
Sbjct: 189 EVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLH 248

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
           A + ++G    L   N+L+ MY K   I  A  LFD M  KD + ++A++S Y Q    +
Sbjct: 249 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 308

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALV 418
           +AF +F  M+   V P+  TMV L+  C+   AL+ G+  H  +  +GL  +  +  AL+
Sbjct: 309 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 368

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           DMYAKCG ++ + ++F+    RDI  WN M+AGYG+HG G+EA   F++M   G  P+G+
Sbjct: 369 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 428

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           TFI LL+ACSH+GLV EGK  F  M HG GL P++EHY CMVDLL R G LDEA+E I+S
Sbjct: 429 TFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 488

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDV 598
           MPLR ++ VW ALL A +++KN  +G+  +  I E+ P+  G  VL+SNIY+ A R+++ 
Sbjct: 489 MPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEA 548

Query: 599 AGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           A VR + K    KK PG S +E+NG +H F+ G   + +S
Sbjct: 549 AEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQS 588



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 145/303 (47%), Gaps = 19/303 (6%)

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M+   V P+  T    +  C  +     G+ +H + +  G +  L ++ AL+DMY KC  
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCAC 60

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE--LFIHMKVSKVRPNEVTMVGLL 383
           +  A  +F  M ++D++ WNA+++ YA       A    L + M++ ++RPN  T+V LL
Sbjct: 61  LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALL 120

Query: 384 SLCTEAGALEMGKWLHTYI----------EKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
            L  + GAL  G  +H Y            K  L   V+L TAL+DMYAKCG +  A R+
Sbjct: 121 PLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRV 180

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG---VKPNGITFIGLLNACSHA 490
           F     R+   W+A++ G+ +     +A + F  M   G   + P  I     L AC+  
Sbjct: 181 FDAMPARNEVTWSALIGGFVLCSRMTQAFLLFKAMLAQGLCFLSPTSIA--SALRACASL 238

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
             +  G+ +   +    G+   +     ++ +  +AGL+D+A  +   M ++ + + + A
Sbjct: 239 DHLRMGEQLHALLAKS-GVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVK-DTVSYSA 296

Query: 551 LLA 553
           L++
Sbjct: 297 LVS 299



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 82/142 (57%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           Y++LV+ Y++N +   A  ++  M+    E D  T+ +++ AC+ +     G+  HG  I
Sbjct: 294 YSALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVI 353

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             GL  +  + NALI MY++CG +  +R +F+ MP+RD+VSW+TMI GY   GL +EA  
Sbjct: 354 IRGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATA 413

Query: 159 VMREMRFMDIRPSEVAMISMVS 180
           +  EM  +   P  V  I ++S
Sbjct: 414 LFLEMNNLGFPPDGVTFICLLS 435


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 218/593 (36%), Positives = 359/593 (60%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           Y++++  Y +N+    A++ +  MR +G     +    +LK C        GKEIH   I
Sbjct: 143 YHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLI 202

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            NG   + +    ++ MY++C  +  A  +FD MP RD+V W+T+I GY + G  + ALE
Sbjct: 203 VNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALE 262

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++  M+    RP  + ++S++   ADV  + +G++IH   +R   +    V ++TAL+DM
Sbjct: 263 LVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFES--FVNVSTALVDM 320

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSKCG++  A+ +F+R+   +VVSW  MI GY++  +    + +F +M++E V  + +T+
Sbjct: 321 YSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTV 380

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +  +  C  +G ++ G+++H  + +      +++ N+L+ MY KC+ +  A  +F+ ++ 
Sbjct: 381 MGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQH 440

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K ++ WNA+I  YAQ   I++A + F  M++  ++P+  TMV ++    E   L   KW+
Sbjct: 441 KTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWI 500

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + +  L+ +V + TALVDMYAKCG V+ A +LF     R +  WNAM+ GYG HG G
Sbjct: 501 HGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLG 560

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           + AL  F  M++  +KPN +TF+ +L+ACSH+GLV EG   F  M    GL P ++HYG 
Sbjct: 561 KAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGA 620

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLLGRA  L+EA + I+ MP+ P + V+GA+L A ++HKN  +GE AA +I +++P +
Sbjct: 621 MVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDD 680

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            GY+VL++NIYA A+ W+ VA VR  M++  ++K PG+S VE+   VH F  G
Sbjct: 681 GGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVELQNEVHTFYSG 733



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 149/446 (33%), Positives = 245/446 (54%), Gaps = 13/446 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N++++ Y +N    +AL +   M++ G   D+ TI +IL A A V    +G+ IHG
Sbjct: 241 LVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHG 300

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           ++++ G +    VS AL+ MYS+CGS+ +AR +FD M  + VVSW++MI GY + G P  
Sbjct: 301 YSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGA 360

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--VAIAT 213
           A+E+ ++M    +  + V ++  +   AD+ DV+ G+ +H  +       +LG  V++  
Sbjct: 361 AMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLL----DQLELGSDVSVMN 416

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           +LI MYSKC  +  A ++F  L   ++VSW  MI GY +   INE +  F +M  +N+ P
Sbjct: 417 SLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKP 476

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T++S+I     +  L   KW+H  ++R   + ++ +A ALVDMY KC  + +AR LF
Sbjct: 477 DSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLF 536

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           D M  + V  WNA+I  Y        A ELF  MK   ++PNEVT + +LS C+ +G +E
Sbjct: 537 DMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVE 596

Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAG 451
            G ++  +  +  GLE  +    A+VD+  +   +N A+    +  I   I ++ AM+  
Sbjct: 597 EGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGA 656

Query: 452 YGMHG---CGEEAL--IFFVDMERSG 472
             +H     GE+A   IF +D +  G
Sbjct: 657 CRIHKNVELGEKAANRIFDLDPDDGG 682



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 148/514 (28%), Positives = 259/514 (50%), Gaps = 28/514 (5%)

Query: 52  PSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA---IKNGLDGDAYV 108
           PSS   I + + K+ S +       +L+ C  +      KE+H F    IKNGL  +   
Sbjct: 65  PSSRTYIPSHVYKHPSAI-------LLELCTSM------KELHQFIPLIIKNGLYSEHLF 111

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI 168
              L+ ++ + GSL  A  +F  + ++    + TM++GY R    ++A+     MR+  +
Sbjct: 112 QTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGV 171

Query: 169 RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYA 228
           RP       ++ +  D AD+  GK IH  ++ N       V   T +++MY+KC  +  A
Sbjct: 172 RPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFAS--NVFAMTGVVNMYAKCRLVEEA 229

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
            ++F+R+ +  +V W  +ISGY +       + L   M EE   P  ITI+S++     V
Sbjct: 230 YKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADV 289

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
           G L++G+ +H Y +R GFE  + ++ ALVDMY KC  + +AR +FD M  K V+ WN++I
Sbjct: 290 GSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMI 349

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
             Y Q      A E+F  M   +V    VT++G L  C + G +E G+++H  +++  L 
Sbjct: 350 DGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELG 409

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            DV +  +L+ MY+KC  V+ A  +F    ++ +  WNAM+ GY  +G   EA+ +F  M
Sbjct: 410 SDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKM 469

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH----YGCMVDLLG 524
           +   +KP+  T + ++ A +   ++ +      K +HGL +   ++        +VD+  
Sbjct: 470 QLQNIKPDSFTMVSVIPALAELSVLPQA-----KWIHGLVIRTCLDKNVFVATALVDMYA 524

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           + G +  A ++   M  R ++  W A++     H
Sbjct: 525 KCGAVHTARKLFDMMDER-HVTTWNAMIDGYGTH 557



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 193/382 (50%), Gaps = 7/382 (1%)

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T L+ ++ K G+L  A ++F  +       +  M+ GY R + +++ V  F  M  + V 
Sbjct: 113 TKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVR 172

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P       L+  CG    L+ GK +H  ++ NGF  ++     +V+MY KCR +  A  +
Sbjct: 173 PVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKM 232

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FD M  +D++ WN +IS YAQ      A EL + M+    RP+ +T+V +L    + G+L
Sbjct: 233 FDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSL 292

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
            +G+ +H Y  + G E  V + TALVDMY+KCG V  A  +F     + +  WN+M+ GY
Sbjct: 293 RIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGY 352

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             +G    A+  F  M    V+   +T +G L+AC+  G V +G+ V  K++  L L   
Sbjct: 353 VQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVH-KLLDQLELGSD 411

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA--ASKLHKNPSMGEIAATQ 570
           +     ++ +  +   +D A E+ +++  +  ++ W A++   A     N ++      Q
Sbjct: 412 VSVMNSLISMYSKCKRVDIAAEIFENLQHK-TLVSWNAMILGYAQNGRINEAIDYFCKMQ 470

Query: 571 ILEIEPQNYGYNVLMSNIYAVA 592
           +  I+P ++    ++S I A+A
Sbjct: 471 LQNIKPDSF---TMVSVIPALA 489


>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
 gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
          Length = 845

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/686 (34%), Positives = 372/686 (54%), Gaps = 65/686 (9%)

Query: 9   NLEQTRQCHAHIIKT---HFKFSYTNIINPLTR--------------------------- 38
            + + +Q H+ I K    H   S TN+I+  T                            
Sbjct: 45  TMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTH 104

Query: 39  --YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGF 96
             ++SL+  +        A+ ++  +   G+  DNFT P +L AC +      G ++HG 
Sbjct: 105 YMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGA 164

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
            +K G + D +V N+LI  Y ECG +   R +FD+M  R+VVSW+++I GY + G  +EA
Sbjct: 165 IVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEA 224

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           + +  EM  + IRP+ V M+ ++S  A + D+ LG+ +  C+     + ++   +  AL+
Sbjct: 225 VSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGE--LELEVNALMVNALV 282

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           DMY KCG +  A+++F+     ++V +  ++S Y+R     E + +  EM++    P  I
Sbjct: 283 DMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRI 342

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC------------- 323
           T+LS +  C  +  +  GKW H Y+LRNG E    + NA+++MY KC             
Sbjct: 343 TMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRM 402

Query: 324 ------------------REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
                              ++ SA  +F  M   D++ WN +I A  Q     +A ELF 
Sbjct: 403 LNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFR 462

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            M+   +  ++VTMVG+ S C   GAL++ KW+H YI+K+ +  D+ L TALVDM+A+CG
Sbjct: 463 VMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCG 522

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
           D   A ++F++ + RD+  W A +    M G G  A+  F +M + G+KP+G+ F+ LL 
Sbjct: 523 DPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLT 582

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
           A SH GLV +G  +F  M    G+ P+  HYGCMVDLLGRAGLL EA  +I SM + PN 
Sbjct: 583 ALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPND 642

Query: 546 IVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVM 605
           ++WG+LLAA ++HKN  +   AA +I E++P+  G +VL+SNIYA A RW+DVA VR  +
Sbjct: 643 VIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHL 702

Query: 606 KEIRVKKEPGFSSVEVNGLVHKFIRG 631
           KE    K PG SS+E+NG + +F  G
Sbjct: 703 KEKGAHKMPGSSSIEINGKIFEFTTG 728


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 234/650 (36%), Positives = 371/650 (57%), Gaps = 24/650 (3%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHFK--FSYTNIINPLTR------------YNSLVTSYIK 48
           IKNG  N         H+ +T     FS    IN   R            Y++++  Y K
Sbjct: 73  IKNGLYN--------EHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAK 124

Query: 49  NNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYV 108
           N+   +AL     MR +  +   +    +LK C        GKEIHG  I N    + + 
Sbjct: 125 NSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFA 184

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI 168
              ++ MY++C  +  A  +FD MP RD+VSW+T+I G+ + G  ++ALE++  M+    
Sbjct: 185 MTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQ 244

Query: 169 RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYA 228
           RP  + +++++   ADV  + +GK+IH   +R     KL V I+TAL DMYSKCG++  A
Sbjct: 245 RPDSITLVTVLPAAADVGLLMVGKSIHGYAIR-AGFAKL-VNISTALADMYSKCGSVETA 302

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
           + +F+ ++Q +VVSW  M+ GY++  E  + + +F +M+EE + P+ +TI+  +  C  +
Sbjct: 303 RLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADL 362

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
           G L+ GK++H ++ +      +++ N+L+ MY KC+ +  A  +F+ +  +  + WNA+I
Sbjct: 363 GDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMI 422

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
             YAQ   + +A   F  MK   ++P+  TMV ++    E       KW+H  I +  L+
Sbjct: 423 LGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLD 482

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            ++ + TALVDMY+KCG ++ A +LF     R +  WNAM+ GYG HG G  AL  F  M
Sbjct: 483 KNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKM 542

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
           ++  V+PN IT++ +++ACSH+GLV EG   F  M    GL P ++HYG MVDLLGRAG 
Sbjct: 543 KKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGR 602

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNI 588
           + EA + I++MP+ P + V+GA   A K+HKN  +GE AA ++ E+ P   GY+VL++NI
Sbjct: 603 IKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANI 662

Query: 589 YAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           YA  ++W+ VA VR+ M++  +KK PG S VE+   VH F  G   + +S
Sbjct: 663 YASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSFYSGSTTHPQS 712



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 140/475 (29%), Positives = 245/475 (51%), Gaps = 15/475 (3%)

Query: 91  KEIH---GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
           KE+H      IKNGL  +      L+ ++S+ GS+  A  +F+ + ++    + TM++GY
Sbjct: 63  KELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGY 122

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
            +    E AL  +  MR+ D++P       ++ +  D AD+  GK IH  ++ N      
Sbjct: 123 AKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITN--SFAA 180

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            V   T +++MY+KC  +  A ++F+R+ +  +VSW  +I+G+ +     + + L   M 
Sbjct: 181 NVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQ 240

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
           +E   P  IT+++++     VG L +GK +H Y +R GF   + ++ AL DMY KC  + 
Sbjct: 241 DEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVE 300

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           +AR +FDGM  K V+ WN+++  Y Q    +KA  +F  M    + P  VT++  L  C 
Sbjct: 301 TARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACA 360

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
           + G LE GK++H ++++  L  D+ +  +L+ MY+KC  V+ A  +F+    R    WNA
Sbjct: 361 DLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNA 420

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           M+ GY  +G   EAL  F +M+  G+KP+  T + ++ A +   +         K +HGL
Sbjct: 421 MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHA-----KWIHGL 475

Query: 508 ----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
                L   I     +VD+  + G +  A ++   +  R ++I W A++     H
Sbjct: 476 IIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDR-HVITWNAMIDGYGTH 529



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 136/295 (46%), Gaps = 7/295 (2%)

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           +++NG          LV ++ K   I  A  +F+ +  K   +++ ++  YA+   ++ A
Sbjct: 72  VIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETA 131

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
                 M+   V+P       LL +C +   L+ GK +H  +       +V   T +V+M
Sbjct: 132 LAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNM 191

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           YAKC  ++ AY++F     RD+  WN ++AG+  +G  ++AL   + M+  G +P+ IT 
Sbjct: 192 YAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITL 251

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
           + +L A +  GL+  GKS+    +   G    +     + D+  + G ++ A  +   M 
Sbjct: 252 VTVLPAAADVGLLMVGKSIHGYAIRA-GFAKLVNISTALADMYSKCGSVETARLIFDGMD 310

Query: 541 LRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMSNIYAVAN 593
            +  ++ W +++     +  P        ++LE  I+P       +M  ++A A+
Sbjct: 311 QK-TVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGV---TIMEALHACAD 361


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/624 (37%), Positives = 350/624 (56%), Gaps = 72/624 (11%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++ +YI++N    AL +Y  M KN    DN+T P +++ACA  L+   GKEIH   +
Sbjct: 109 WNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVL 168

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G D D YV N LI MY+ CG++  AR LFDE P  D VSW++++ GY + G  EEA  
Sbjct: 169 KVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKL 228

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M   +I    VA  SM+ L                                     
Sbjct: 229 IFDQMPQRNI----VASNSMIVLLG----------------------------------- 249

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
             K G +  A +LFN +++  +VSW+ +ISGY +     E + +F EM    +   E+ +
Sbjct: 250 --KMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVV 307

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG----------------- 321
           +S++  C  +  ++ GK +H  ++R G E  + + NAL+ MY                  
Sbjct: 308 VSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHN 367

Query: 322 --------------KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
                         KC  +  AR LFD M  KD++ W+AVIS YAQ  C  +   LF  M
Sbjct: 368 LDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEM 427

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           ++ ++RP+E  +V ++S CT   AL+ GKW+H YI K GL+V+VIL T L+DMY KCG V
Sbjct: 428 QLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCV 487

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             A  +F+    + +  WNA++ G  ++G  E +L  F +M+ +GV PN ITF+G+L AC
Sbjct: 488 ENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGAC 547

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
            H GLV EG+  F  M+   G+ P ++HYGCMVDLLGRAGLL+EA ++I+SMP+ P++  
Sbjct: 548 RHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVAT 607

Query: 548 WGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
           WGALL A K H +  MGE    +++E++P + G++VL+SNI+A    W DV  VR +MK+
Sbjct: 608 WGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQ 667

Query: 608 IRVKKEPGFSSVEVNGLVHKFIRG 631
             V K PG S +E NG+VH+F+ G
Sbjct: 668 QGVVKTPGCSLIEANGVVHEFLAG 691



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 174/348 (50%), Gaps = 35/348 (10%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +++L++ Y +N     AL ++  M  NG  +D   + ++L ACA + +   GK IHG
Sbjct: 269 MVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHG 328

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG---- 151
             I+ G++    + NALI MYS  G ++ A+ LF+   N D +SW++MI G  + G    
Sbjct: 329 LVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEK 388

Query: 152 -------LPE--------------------EALEVMREMRFMDIRPSEVAMISMVSLFAD 184
                  +PE                    E L +  EM+   IRP E  ++S++S    
Sbjct: 389 ARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTH 448

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
           +A +D GK +HA + +N    K+ V + T L+DMY KCG +  A ++FN + +  V SW 
Sbjct: 449 LAALDQGKWVHAYIRKN--GLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWN 506

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYIL-R 303
            +I G      +   + +F+EM    V P+EIT + ++  C  +G +  G+   A ++ +
Sbjct: 507 ALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEK 566

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
           +G E ++     +VD+ G+   +  A  L + M  + DV  W A++ A
Sbjct: 567 HGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGA 614



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 216/489 (44%), Gaps = 78/489 (15%)

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARY---LFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           I  G   D + ++ L++ +S     +   Y   +FD + N +   W+TM+R Y +    E
Sbjct: 65  ILTGFISDTFAASRLLK-FSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAE 123

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           +AL + + M   ++ P       +V   A       GK IH  V++   D    V +   
Sbjct: 124 KALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSD--VYVQNT 181

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LI+MY+ CGN+  A++LF+       VSW  +++GY++  ++ E   +F +M + N+  S
Sbjct: 182 LINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVAS 241

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
                                                  N+++ + GK  ++  A  LF+
Sbjct: 242 ---------------------------------------NSMIVLLGKMGQVMEAWKLFN 262

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M  KD++ W+A+IS Y Q    ++A  +FI M  + +R +EV +V +LS C     ++ 
Sbjct: 263 EMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKT 322

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYA-------------------------------K 423
           GK +H  + + G+E  V L+ AL+ MY+                               K
Sbjct: 323 GKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMK 382

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
           CG V  A  LF     +DI  W+A+++GY  H C  E L  F +M+   ++P+    + +
Sbjct: 383 CGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSV 442

Query: 484 LNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           ++AC+H   + +GK V    +   GL   +     ++D+  + G ++ A E+   M    
Sbjct: 443 ISACTHLAALDQGKWVH-AYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGME-EK 500

Query: 544 NMIVWGALL 552
            +  W AL+
Sbjct: 501 GVSSWNALI 509


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  444 bits (1141), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/604 (38%), Positives = 348/604 (57%), Gaps = 6/604 (0%)

Query: 26  KFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVL 85
           KFS  ++++    +N +++ Y        A N++  M++   E D FT  +IL AC+   
Sbjct: 88  KFSNKSVVS----WNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPA 143

Query: 86  MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIR 145
           + + G+EIH   ++ GL  D  V NALI MY++CGS+  AR +FD M +RD VSW+T+  
Sbjct: 144 VLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTG 203

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
            Y   G  EE+L+    M    +RPS +  ++++S    +A ++ GK IHA +V +  + 
Sbjct: 204 AYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVES--EY 261

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
              V ++TAL  MY KCG    A+++F  L+   V++W  MI G++   ++ E    F  
Sbjct: 262 HSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHR 321

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M+EE V P   T  +++  C   GGL  GK +HA   ++G    +   NAL++MY K   
Sbjct: 322 MLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGS 381

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           ++ AR +FD M  +DV+ W  ++  YA    + ++F  F  M    V+ N++T + +L  
Sbjct: 382 MKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKA 441

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
           C+   AL+ GK +H  + K GL  D+ +  AL+ MY KCG V  A R+F     RD+  W
Sbjct: 442 CSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTW 501

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           N ++ G G +G G EAL  +  M+  G++PN  TF+ +L+AC    LV EG+  F  M  
Sbjct: 502 NTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSK 561

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
             G+VP  +HY CMVD+L RAG L EA ++I ++PL+P+  +WGALLAA ++H N  +GE
Sbjct: 562 DYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIHCNVEIGE 621

Query: 566 IAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLV 625
            AA   L++EPQN G  V +S IYA A  W DVA +R+ MKE  VKKEPG S +E+ G V
Sbjct: 622 RAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSWIEIAGEV 681

Query: 626 HKFI 629
           H F+
Sbjct: 682 HSFV 685



 Score =  274 bits (701), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 146/502 (29%), Positives = 270/502 (53%), Gaps = 16/502 (3%)

Query: 57  NIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMY 116
           ++  ++ + G +VD++    +L++C +     +GK++H   ++ G+  + Y++N L+++Y
Sbjct: 14  DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73

Query: 117 SECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMI 176
           + CGS+  AR LFD+  N+ VVSW+ MI GY   GL +EA  +   M+   + P +   +
Sbjct: 74  AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133

Query: 177 SMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLF 232
           S++S  +  A ++ G+ IH  V+      + G+A    +  ALI MY+KCG++  A+++F
Sbjct: 134 SILSACSSPAVLNWGREIHVRVM------EAGLANDTTVGNALISMYAKCGSVRDARRVF 187

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
           + +     VSWT +   Y       E ++ +  M++E V PS IT ++++  CG +  L+
Sbjct: 188 DAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALE 247

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
            GK +HA+I+ + +   + ++ AL  MY KC   + AR +F+ +  +DV+ WN +I  + 
Sbjct: 248 KGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFV 307

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
            +  +++A   F  M    V P+  T   +LS C   G L  GK +H    K GL  DV 
Sbjct: 308 DSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVR 367

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE--EALIFFVDMER 470
              AL++MY+K G +  A ++F     RD+  W  ++  Y    C +  E+   F  M +
Sbjct: 368 FGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYA--DCDQVVESFTTFKQMLQ 425

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
            GVK N IT++ +L ACS+   +  GK +  ++V   GL+  +     ++ +  + G ++
Sbjct: 426 QGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKA-GLLADLAVTNALMSMYFKCGSVE 484

Query: 531 EAHEMIKSMPLRPNMIVWGALL 552
           +A  + + M +R +++ W  L+
Sbjct: 485 DAIRVFEGMSMR-DVVTWNTLI 505



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 179/374 (47%), Gaps = 31/374 (8%)

Query: 10  LEQTRQCHAHIIKTHFKFSYTNIINPLTR-------------------------YNSLVT 44
           LE+ +Q HAHI+++ +  S   +   LT+                         +N+++ 
Sbjct: 246 LEKGKQIHAHIVESEY-HSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIR 304

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
            ++ + +   A   +  M + G   D  T  T+L ACA+      GKEIH  A K+GL  
Sbjct: 305 GFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVS 364

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           D    NALI MYS+ GS+  AR +FD MP RDVVSW+T++  Y       E+    ++M 
Sbjct: 365 DVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQML 424

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
              ++ +++  + ++   ++   +  GK IHA VV+      L  A+  AL+ MY KCG+
Sbjct: 425 QQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADL--AVTNALMSMYFKCGS 482

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           +  A ++F  ++   VV+W  +I G  +     E ++ +  M  E + P+  T ++++  
Sbjct: 483 VEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSA 542

Query: 285 CGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK-DVM 342
           C     ++ G+   A++ ++ G   +      +VD+  +   +R A  +   +  K    
Sbjct: 543 CRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAA 602

Query: 343 IWNAVISAYAQAHC 356
           +W A+++A  + HC
Sbjct: 603 MWGALLAA-CRIHC 615


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/595 (39%), Positives = 354/595 (59%), Gaps = 6/595 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +NS + SY +  +    L ++  M     E  DNFTIP  LKACA + M  LGK IHGFA
Sbjct: 70  WNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFA 129

Query: 98  IKNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
            KN  +  D +V +AL+++YS+CG +  A  +F+E    D V W++M+ GY +   PEEA
Sbjct: 130 KKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEA 189

Query: 157 LEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           L +  +M  MD +    V ++S+VS  A + +V  G  +H  V+R   D  L   +  +L
Sbjct: 190 LALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDL--PLVNSL 247

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +++Y+K G    A  LF+++ +  V+SW+ MI+ Y      NE + LF EMIE+   P+ 
Sbjct: 248 LNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNS 307

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T++S +  C     L+ GK +H   +  GFE   +++ AL+DMY KC     A  LF  
Sbjct: 308 VTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQR 367

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +  KDV+ W A++S YAQ     K+  +F +M    ++P+ V +V +L+  +E G  +  
Sbjct: 368 LPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQA 427

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             LH Y+ + G   +V +  +L+++Y+KCG +  A +LF   I RD+ +W++M+A YG+H
Sbjct: 428 LCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIH 487

Query: 456 GCGEEALIFFVDM-ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           G G EAL  F  M + S V+PN +TF+ +L+ACSHAGLV EG  +FD+MVH   L P  E
Sbjct: 488 GRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSE 547

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           H+G MVDLLGR G L +A ++I  MP+     VWGALL A ++H N  MGE AA  +  +
Sbjct: 548 HFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWL 607

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +P + GY +L+SNIYAV  +W++VA +R  +KE  +KK  G S VEV G VH F+
Sbjct: 608 DPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFL 662



 Score =  317 bits (812), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 158/407 (38%), Positives = 244/407 (59%), Gaps = 10/407 (2%)

Query: 232  FNRLNQNSVVS----------WTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
            FNR++  S+V           W VMI G+         + L+++M+E+ + P +      
Sbjct: 765  FNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFA 824

Query: 282  IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
            +  C  +  LQ GK +H +++  G    L +  ALVDMY KC +I +AR +FD M  +D+
Sbjct: 825  LKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDL 884

Query: 342  MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
            + W ++IS YA      +    F  M+ S V PN V+++ +L  C   GAL  G+W H+Y
Sbjct: 885  VSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSY 944

Query: 402  IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
            + + G E D+++ TA++DMY+KCG ++ A  LF E   +D+  W+AM+A YG+HG G +A
Sbjct: 945  VIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKA 1004

Query: 462  LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVD 521
            +  F  M ++GV+P+ +TF  +L+ACSH+GL+ EGK  F  M     +  K+ +Y CMVD
Sbjct: 1005 IDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVD 1064

Query: 522  LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGY 581
            LLGRAG L EA ++I++MP+ P+  +WG+LL A ++H N  + E  A  +  ++P + GY
Sbjct: 1065 LLGRAGQLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGY 1124

Query: 582  NVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            +VL+SNIYA  +RWN+V  VR++M      K  GFS VE +  VHKF
Sbjct: 1125 HVLLSNIYAAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKF 1171



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/471 (28%), Positives = 248/471 (52%), Gaps = 9/471 (1%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           ++H    K G+  D + +  L  +Y++C SL +AR +FDE P+ +V  W++ +R Y R  
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81

Query: 152 LPEEALEVMREMRFMDIR-PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG-- 208
             EE L +   M       P    +   +   A +  ++LGK IH    +N   +++G  
Sbjct: 82  QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKN---DEIGSD 138

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI- 267
           + + +AL+++YSKCG +  A ++F    +   V WT M++GY + N+  E + LF++M+ 
Sbjct: 139 MFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVM 198

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
            + V    +T++S++  C  +  ++ G  +H  ++R  F+  L + N+L+++Y K    +
Sbjct: 199 MDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEK 258

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            A  LF  M  KDV+ W+ +I+ YA     ++A  LF  M   +  PN VT+V  L  C 
Sbjct: 259 IAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACA 318

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
            +  LE GK +H     +G E+D  + TAL+DMY KC   + A  LF     +D+  W A
Sbjct: 319 VSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVA 378

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           +++GY  +G   +++  F +M   G++P+ +  + +L A S  G+  +   +   +V   
Sbjct: 379 LLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRS- 437

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           G    +     +++L  + G L +A ++ K M +R ++++W +++AA  +H
Sbjct: 438 GFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVR-DVVIWSSMIAAYGIH 487



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 195/367 (53%), Gaps = 4/367 (1%)

Query: 91   KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
            K+ H      GL  D+ +      MY     + +A  +F+++PN     W+ MIRG+   
Sbjct: 737  KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796

Query: 151  GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
            G    +LE+  +M    ++P + A    +   A ++D+  GK IH  +V  C      + 
Sbjct: 797  GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLV--CCGCSNDLF 854

Query: 211  IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
            +  AL+DMY+KCG++  A+ +F+++    +VSWT MISGY      +E +  F  M    
Sbjct: 855  VDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSG 914

Query: 271  VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
            V P+ ++ILS+++ CG +G L+ G+W H+Y+++ GFEF + +A A++DMY KC  +  AR
Sbjct: 915  VIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLAR 974

Query: 331  TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
             LFD    KD++ W+A+I++Y       KA +LF  M  + VRP+ VT   +LS C+ +G
Sbjct: 975  CLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSG 1034

Query: 391  ALEMGK-WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAM 448
             LE GK +     E+  +   +     +VD+  + G ++ A  L     +  D  +W ++
Sbjct: 1035 LLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSL 1094

Query: 449  MAGYGMH 455
            +    +H
Sbjct: 1095 LGACRIH 1101



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 183/343 (53%), Gaps = 7/343 (2%)

Query: 29   YTNIINPLT-RYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
            + +I NP +  +N ++  +  + +  S+L +Y+ M + G + D F  P  LK+CA +   
Sbjct: 775  FEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDL 834

Query: 88   HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
              GK IH   +  G   D +V  AL+ MY++CG + +AR +FD+M  RD+VSW++MI GY
Sbjct: 835  QRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGY 894

Query: 148  HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
               G   E L     MR   + P+ V+++S++    ++  +  G+  H+ V++     + 
Sbjct: 895  AHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQT--GFEF 952

Query: 208  GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
             + +ATA++DMYSKCG+L  A+ LF+      +V W+ MI+ Y       + + LF +M+
Sbjct: 953  DILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMV 1012

Query: 268  EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN--ALVDMYGKCRE 325
            +  V PS +T   ++  C   G L+ GK ++  ++   F  +  ++N   +VD+ G+  +
Sbjct: 1013 KAGVRPSHVTFTCVLSACSHSGLLEEGK-MYFQLMTEEFVIARKLSNYACMVDLLGRAGQ 1071

Query: 326  IRSARTLFDGMK-SKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
            +  A  L + M    D  IW +++ A    + +D A ++  H+
Sbjct: 1072 LSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHL 1114



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 126/264 (47%), Gaps = 2/264 (0%)

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
           K  HA I   G ++   +      MY     I +A  +F+ + +    +WN +I  +A  
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
                + EL+  M    ++P++      L  C     L+ GK +H ++   G   D+ + 
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
            ALVDMYAKCGD+  A  +F +   RD+  W +M++GY  +G   E L FF  M  SGV 
Sbjct: 857 AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
           PN ++ + +L AC + G + +G+  F   V   G    I     ++D+  + G LD A  
Sbjct: 917 PNRVSILSVLLACGNLGALRKGE-WFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 975

Query: 535 MIKSMPLRPNMIVWGALLAASKLH 558
           +      + +++ W A++A+  +H
Sbjct: 976 LFDETAGK-DLVCWSAMIASYGIH 998


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 229/606 (37%), Positives = 350/606 (57%), Gaps = 6/606 (0%)

Query: 26  KFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVL 85
           KFS  ++++    +N +++ Y        A N++  M++ G E D FT  +IL AC+   
Sbjct: 104 KFSNKSVVS----WNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPA 159

Query: 86  MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIR 145
             + G+E+H   ++ GL  +A V NALI MY++CGS+  AR +FD M +RD VSW+T+  
Sbjct: 160 ALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTG 219

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
            Y   G  +E+L+    M    +RPS +  ++++S    +A ++ GK IHA +V +  + 
Sbjct: 220 AYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVES--EH 277

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
              V ++TAL  MY KCG +  A+++F  L    V++W  MI G +   ++ E   +F  
Sbjct: 278 HSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHR 337

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M++E V P  +T L+++  C   GGL  GK +HA  +++G    +   NAL++MY K   
Sbjct: 338 MLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGS 397

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           ++ AR +FD M  +DV+ W A++  YA    + ++F  F  M    V  N++T + +L  
Sbjct: 398 MKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKA 457

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
           C+   AL+ GK +H  + K G+  D+ +  AL+ MY KCG V  A R+      RD+  W
Sbjct: 458 CSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTW 517

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           N ++ G   +G G EAL  F  M+   ++PN  TF+ +++AC    LV EG+  F  M  
Sbjct: 518 NTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRK 577

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
             G+VP  +HY CMVD+L RAG L EA ++I +MP +P+  +WGALLAA + H N  +GE
Sbjct: 578 DYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGE 637

Query: 566 IAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLV 625
            AA Q L++EPQN G  V +S IYA A  W DVA +R++MKE  VKKEPG S +EV G V
Sbjct: 638 QAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSWIEVAGEV 697

Query: 626 HKFIRG 631
           H F+ G
Sbjct: 698 HSFVAG 703



 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 270/500 (54%), Gaps = 12/500 (2%)

Query: 57  NIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMY 116
           ++  ++ + GS+VD++    +L++C +     +GK++H   ++ G+  + Y+ N L+++Y
Sbjct: 30  DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLY 89

Query: 117 SECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMI 176
             CGS+  AR LFD+  N+ VVSW+ MI GY   GL +EA  +   M+   + P +   +
Sbjct: 90  VHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149

Query: 177 SMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLF 232
           S++S  +  A ++ G+ +H  V+      + G+A    +  ALI MY+KCG++  A+++F
Sbjct: 150 SILSACSSPAALNWGREVHVRVM------EAGLANNATVGNALISMYAKCGSVRDARRVF 203

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
           + +     VSWT +   Y       E ++ +  M++E V PS IT ++++  CG +  L+
Sbjct: 204 DAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALE 263

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
            GK +HA I+ +     + ++ AL  MY KC  ++ AR +F+ + ++DV+ WN +I    
Sbjct: 264 KGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLV 323

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
            +  +++A  +F  M    V P+ VT + +LS C   G L  GK +H    K GL  DV 
Sbjct: 324 DSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVR 383

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
              AL++MY+K G +  A ++F     RD+  W A++ GY   G   E+   F  M + G
Sbjct: 384 FGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQG 443

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
           V+ N IT++ +L ACS+   +  GK +  ++V   G+   +     ++ +  + G +++A
Sbjct: 444 VEANKITYMCVLKACSNPVALKWGKEIHAEVVKA-GIFADLAVANALMSMYFKCGSVEDA 502

Query: 533 HEMIKSMPLRPNMIVWGALL 552
             + + M  R +++ W  L+
Sbjct: 503 IRVSEGMSTR-DVVTWNTLI 521


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  441 bits (1133), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 232/630 (36%), Positives = 370/630 (58%), Gaps = 7/630 (1%)

Query: 9   NLEQTRQCHAHIIKTHFKFS---YTNIINPLTR-YNSLVTSYIKNNKPSSALNIYAFMRK 64
           N E  ++   HI +     +   +  I  P  R YN+L+ +Y       +A+++Y  M  
Sbjct: 33  NKEWQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLY 92

Query: 65  NGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVS 124
                + +T P +LKAC+ +     G+ IH  A   GL  D +VS ALI +Y  C     
Sbjct: 93  FRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGP 152

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVSLFA 183
           A  +F +MP RDVV+W+ M+ GY   G+   A+  + +M+    +RP+   ++S++ L A
Sbjct: 153 AANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLA 212

Query: 184 DVADVDLGKAIHACVVRNCKDE-KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVS 242
               +  G ++HA  +R   D+ +  V I TAL+DMY+KC +L YA ++F+ +   + V+
Sbjct: 213 QHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVT 272

Query: 243 WTVMISGYIRCNEINEGVRLFAEMIEENV-FPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           W+ +I G++ C+ + E   LF +M+ E + F S  ++ S +  C  +  L++G  LHA +
Sbjct: 273 WSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALL 332

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
            ++G    L   N+L+ MY K   I  A  LFD +  KD + + A++S Y Q    ++AF
Sbjct: 333 AKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAF 392

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
            +F  M+   V+P+  TMV L+  C+   AL+ G+  H  +  +GL ++  +  +L+DMY
Sbjct: 393 LVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMY 452

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
           AKCG ++ + ++F +   RDI  WN M+AGYG+HG G+EA   F+ M+  G +P+ +TFI
Sbjct: 453 AKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFI 512

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
            L+ ACSH+GLVTEGK  FD M H  G++P++EHY CMVDLL R G LDEA++ I+SMPL
Sbjct: 513 CLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPL 572

Query: 542 RPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGV 601
           + ++ VWGALL A ++HKN  +G+  +  I ++ P+  G  VL+SNI++ A R+++ A V
Sbjct: 573 KADVRVWGALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEV 632

Query: 602 RRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           R + K    KK PG S +E+NG +H F+ G
Sbjct: 633 RIIQKVKGFKKSPGCSWIEINGSLHAFVGG 662


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 233/633 (36%), Positives = 351/633 (55%), Gaps = 38/633 (6%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  ++S++ +Y  NN P+ A + +  M+    E +  T  +ILKAC    M    +E
Sbjct: 141 LRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKARE 200

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IH     +G++ D  V+ ALI MYS+CG +  A  +F +M  R+VVSW+ +I+   +   
Sbjct: 201 IHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRK 260

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
             EA E+  +M    I P+ V  +S+++       ++ G+ IH+ +    +  +  V +A
Sbjct: 261 LNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISE--RGLETDVVVA 318

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC-----NEINEGVRLFAEMI 267
            ALI MY KC  +  A++ F+R+++  V+SW+ MI+GY +        ++E  +L   M 
Sbjct: 319 NALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMR 378

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI- 326
            E VFP+++T +S++  C   G L+ G+ +HA I + GFE   ++  A+ +MY KC  I 
Sbjct: 379 REGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIY 438

Query: 327 ------------------------------RSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
                                          SA  +F  M +++V+ WN +I+ YAQ+  
Sbjct: 439 EAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGD 498

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
           I K FEL   MKV   +P+ VT++ +L  C    ALE GK +H    K GLE D ++ T+
Sbjct: 499 IAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATS 558

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           L+ MY+KCG+V  A  +F +   RD   WNAM+AGYG HG G EA+  F  M +  V PN
Sbjct: 559 LIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPN 618

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
            ITF  +++AC  AGLV EG+ +F  M     + P  +HYGCMVDLLGRAG L EA E I
Sbjct: 619 EITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFI 678

Query: 537 KSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWN 596
           + MP  P++ VW ALL A K H N  + E AA  IL +EP N    V +SNIYA A RW+
Sbjct: 679 QRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWD 738

Query: 597 DVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           D   VR+VM +  +KK+ G SS+E++G +H F+
Sbjct: 739 DSTKVRKVMDDKGLKKDRGESSIEIDGRIHTFV 771



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 192/357 (53%), Gaps = 11/357 (3%)

Query: 205 EKLGVAI----ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
           ++LG+AI      +LI+ YSK G++A  +Q+F R+    VV+W+ MI+ Y   N   +  
Sbjct: 105 DELGLAIDIYLGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAF 164

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
             F  M + N+ P+ IT LS++  C     L+  + +H  +  +G E  +A+A AL+ MY
Sbjct: 165 DTFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMY 224

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
            KC EI  A  +F  MK ++V+ W A+I A AQ   +++AFEL+  M  + + PN VT V
Sbjct: 225 SKCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFV 284

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
            LL+ C    AL  G+ +H++I ++GLE DV++  AL+ MY KC  +  A   F     R
Sbjct: 285 SLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKR 344

Query: 441 DICMWNAMMAGYGMHGCG-----EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
           D+  W+AM+AGY   G       +E       M R GV PN +TF+ +L ACS  G + +
Sbjct: 345 DVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQ 404

Query: 496 GKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           G+ +  + +  +G          + ++  + G + EA ++   M    N++ W +LL
Sbjct: 405 GRQIHAE-ISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKME-NKNVVAWASLL 459



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 162/325 (49%), Gaps = 7/325 (2%)

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +   + E ++L   + +  +  +  T   +I  C  +   + GK +H  +   G    + 
Sbjct: 55  KAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIY 114

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           + N+L++ Y K  ++ S   +F  M  +DV+ W+++I+AYA  +   KAF+ F  MK + 
Sbjct: 115 LGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDAN 174

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           + PN +T + +L  C     LE  + +HT ++  G+E DV + TAL+ MY+KCG+++ A 
Sbjct: 175 IEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLAC 234

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
            +F +   R++  W A++     H    EA   +  M ++G+ PN +TF+ LLN+C+   
Sbjct: 235 EIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPE 294

Query: 492 LVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
            +  G+ +    +   GL   +     ++ +  +   + +A E    M  R ++I W A+
Sbjct: 295 ALNRGRRIHSH-ISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKR-DVISWSAM 352

Query: 552 LAA---SKLHKNPSMGEIAATQILE 573
           +A    S      S+ E+   Q+LE
Sbjct: 353 IAGYAQSGYQDKESLDEV--FQLLE 375



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 112/214 (52%), Gaps = 5/214 (2%)

Query: 22  KTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC 81
           K   + S  N+++    +N ++  Y ++   +    + + M+  G + D  TI +IL+AC
Sbjct: 473 KVFSEMSTRNVVS----WNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEAC 528

Query: 82  AQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWS 141
             +     GK +H  A+K GL+ D  V+ +LI MYS+CG +  AR +FD++ NRD V+W+
Sbjct: 529 GALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWN 588

Query: 142 TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN 201
            M+ GY + G+  EA+++ + M    + P+E+   +++S       V  G+ I   +  +
Sbjct: 589 AMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQED 648

Query: 202 CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL 235
            +  K G      ++D+  + G L  A++   R+
Sbjct: 649 FR-MKPGKQHYGCMVDLLGRAGRLQEAEEFIQRM 681


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 236/639 (36%), Positives = 372/639 (58%), Gaps = 55/639 (8%)

Query: 32  IINP----LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           I NP    L R +SL T     N  S  LN       N     N    +++  C++   T
Sbjct: 3   IPNPCLVSLPRSHSLPTP----NPNSITLN-------NDRYFANHPTLSLIDQCSE---T 48

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMPNRDVVSWSTMIR 145
              K+IH   ++ GL  D + ++ LI     S   SL  A+ +FD++P+ ++ +W+T+IR
Sbjct: 49  KQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIR 108

Query: 146 GYHRGGLPEEALEV-MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
            Y     P ++L + +R +      P +     ++   +++ ++  GKA H  V++    
Sbjct: 109 AYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLG 168

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
               V I  +LI  Y+KCG L    ++F  + +  VVSW  MI+ +++     E + LF 
Sbjct: 169 SD--VFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQ 226

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           EM  +NV P+ IT++ ++  C      + G+W+H+YI RN    SL ++NA++DMY KC 
Sbjct: 227 EMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCG 286

Query: 325 EIRSARTLFDGMKSKDVM-------------------------------IWNAVISAYAQ 353
            +  A+ LFD M  KD++                                WNA+ISAY Q
Sbjct: 287 SVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQ 346

Query: 354 AHCIDKAFELFIHMKVSKV-RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
                +A ELF  +++SK  +P+EVT+V  LS C + GA+++G W+H YI+KQG++++  
Sbjct: 347 CGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCH 406

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           L T+L+DMY KCGD+  A  +F     +D+ +W+AM+AG  MHG G++A+  F  M+   
Sbjct: 407 LTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDK 466

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
           VKPN +TF  +L ACSH GLV EG++ F++M    G++P ++HY CMVD+LGRAGLL+EA
Sbjct: 467 VKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEA 526

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVA 592
            E+I+ MP+ P   VWGALL A  +H+N  + E A +Q++E+EP N+G  VL+SNIYA A
Sbjct: 527 VELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKA 586

Query: 593 NRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            +W+ V+G+R++M+++ +KKEPG SS+EV+G+VH+F+ G
Sbjct: 587 GKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVG 625


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/640 (34%), Positives = 370/640 (57%), Gaps = 18/640 (2%)

Query: 3   IKNGFLN--LEQTRQCHAHIIKTHFKFSY----TNIINPLTR-----YNSLVTSYIKNNK 51
           IKNGF N  L QT+     +I    KF+       +  P+       Y++++  Y KN+ 
Sbjct: 68  IKNGFYNEHLFQTK-----LISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNST 122

Query: 52  PSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNA 111
              A+  Y  MR +      +    +L+   + L    G+EIHG  I NG   + +   A
Sbjct: 123 LRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTA 182

Query: 112 LIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPS 171
           ++ +Y++C  +  A  +F+ MP RD+VSW+T++ GY + G    A++V+ +M+    +P 
Sbjct: 183 VVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPD 242

Query: 172 EVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQL 231
            + ++S++   AD+  + +G++IH    R     +  V +ATA++D Y KCG++  A+ +
Sbjct: 243 SITLVSVLPAVADLKALRIGRSIHGYAFR--AGFEYMVNVATAMLDTYFKCGSVRSARLV 300

Query: 232 FNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL 291
           F  ++  +VVSW  MI GY +  E  E    F +M++E V P+ ++++  +  C  +G L
Sbjct: 301 FKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDL 360

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
           + G+++H  +      F +++ N+L+ MY KC+ +  A ++F  +K K V+ WNA+I  Y
Sbjct: 361 ERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGY 420

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
           AQ  C+++A  LF  M+   ++P+  T+V +++   +       KW+H    +  ++ +V
Sbjct: 421 AQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIRTLMDKNV 480

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
            + TAL+D +AKCG +  A +LF     R +  WNAM+ GYG +G G EAL  F +M+  
Sbjct: 481 FVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGHGREALDLFNEMQNG 540

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
            VKPN ITF+ ++ ACSH+GLV EG   F+ M    GL P ++HYG MVDLLGRAG LD+
Sbjct: 541 SVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDD 600

Query: 532 AHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAV 591
           A + I+ MP++P + V GA+L A ++HKN  +GE  A ++ +++P + GY+VL++N+YA 
Sbjct: 601 AWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYHVLLANMYAS 660

Query: 592 ANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           A+ W+ VA VR  M++  ++K PG S VE+   VH F  G
Sbjct: 661 ASMWDKVARVRTAMEKKGIQKTPGCSLVELRNEVHTFYSG 700



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 160/345 (46%), Gaps = 25/345 (7%)

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           I++NGF         L+ ++ K   I  A  +F+ ++ K  ++++ ++  YA+   +  A
Sbjct: 67  IIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDA 126

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
              +  M+  +V P       LL L  E   L  G+ +H  +   G + ++   TA+V++
Sbjct: 127 VRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNL 186

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           YAKC  +  AY++F     RD+  WN ++AGY  +G    A+   + M+ +G KP+ IT 
Sbjct: 187 YAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITL 246

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMI 536
           + +L A +    +  G+S     +HG       E+       M+D   + G +  A  + 
Sbjct: 247 VSVLPAVADLKALRIGRS-----IHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVF 301

Query: 537 KSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT--QILE--IEPQNYGYNVLMSNIYAVA 592
           K M  R N++ W  ++      +N    E  AT  ++L+  +EP N     +M  ++A A
Sbjct: 302 KGMSSR-NVVSWNTMIDGYA--QNGESEEAFATFLKMLDEGVEPTNVS---MMGALHACA 355

Query: 593 NRWNDVAG--VRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
           N  +   G  V R++ E    K+ GF    +N L+  + +   V+
Sbjct: 356 NLGDLERGRYVHRLLDE----KKIGFDVSVMNSLISMYSKCKRVD 396


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/607 (37%), Positives = 363/607 (59%), Gaps = 4/607 (0%)

Query: 29  YTNIINPLTR-YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  I  P  R YN+L+ +Y       +A+++Y  M +     + +T P +LKAC+ ++  
Sbjct: 57  FDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDL 116

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
             G+ IH  A   GL  D +VS ALI +Y  C     AR +F +MP RDVV+W+ M+ GY
Sbjct: 117 RAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGY 176

Query: 148 HRGGLPEEALEVMREMR-FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE- 205
              G+   A+  + +M+    +RP+   ++S++ L A    +  G +IHA  +R C ++ 
Sbjct: 177 ANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQN 236

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           +  V I TAL+DMY+KC  L YA ++F+ +   + V+W+ +I G++ C+ + E   LF +
Sbjct: 237 EEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKD 296

Query: 266 MIEENV-FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           M+ E + F S  ++ S +  C  +  L +G  LHA I ++G    L  +N+L+ MY K  
Sbjct: 297 MLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAG 356

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            I  A   FD +  KD + + A++S   Q    ++AF +F  M+   + P+  TMV L+ 
Sbjct: 357 LINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIP 416

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
            C+   AL+ GK  H  +  +GL ++  +  +L+DMYAKCG ++ + ++F +   RD+  
Sbjct: 417 ACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVS 476

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           WN M+AGYG+HG G+EA   F+ M+  G  P+ +TFI L+ ACSH+GLVTEGK  FD M 
Sbjct: 477 WNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMT 536

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
           H  G++P++EHY CMVDLL R GLLDEA++ I+SMPL+ ++ VWGALL A ++HKN  +G
Sbjct: 537 HKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLG 596

Query: 565 EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
           +  +  I ++ P+  G  VL+SNI++ A R+++ A VR + K    KK PG+S +E+NG 
Sbjct: 597 KQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGS 656

Query: 625 VHKFIRG 631
           +H F+ G
Sbjct: 657 LHAFVGG 663



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 228/467 (48%), Gaps = 14/467 (2%)

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV 179
           G L  AR +FD +P  D  +++ +IR Y   G    A+++ R M    + P++     ++
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
              + + D+  G+ IHA          L V  +TALID+Y +C     A+ +F ++    
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFV--STALIDLYIRCARFGPARNVFAKMPMRD 165

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPSEITILSLIIECGFVGGLQLGKWLH 298
           VV+W  M++GY      +  +    +M +   + P+  T++SL+      G L  G  +H
Sbjct: 166 VVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIH 225

Query: 299 AYILRNGFEFS---LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
           AY LR   E +   + +  AL+DMY KC+++  A  +F GM  ++ + W+A+I  +    
Sbjct: 226 AYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCD 285

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVG-LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
            + +AF LF  M V  +     T V   L +C     L MG  LH  I K G+  D+   
Sbjct: 286 RMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTAS 345

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
            +L+ MYAK G +N A   F E   +D   + A+++G   +G  EEA + F  M+   ++
Sbjct: 346 NSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNME 405

Query: 475 PNGITFIGLLNACSHAGLVTEGK-SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
           P+  T + L+ ACSH   +  GK S    ++ GL L   I     ++D+  + G +D + 
Sbjct: 406 PDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSI--CNSLIDMYAKCGKIDLSR 463

Query: 534 EMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYG 580
           ++   MP R +++ W  ++A   +H    +G+ A T  L ++ Q + 
Sbjct: 464 QVFDKMPAR-DVVSWNTMIAGYGIH---GLGKEATTLFLGMKNQGFA 506


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 229/607 (37%), Positives = 363/607 (59%), Gaps = 4/607 (0%)

Query: 29  YTNIINPLTR-YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  I  P  R YN+L+ +Y       +A+++Y  M +     + +T P +LKAC+ ++  
Sbjct: 57  FDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVLKACSALVDL 116

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
             G+ IH  A   GL  D +VS ALI +Y  C     AR +F +MP RDVV+W+ M+ GY
Sbjct: 117 RAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNVFAKMPMRDVVAWNAMLAGY 176

Query: 148 HRGGLPEEALEVMREMR-FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE- 205
              G+   A+  + +M+    +RP+   ++S++ L A    +  G +IHA  +R C ++ 
Sbjct: 177 ANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQN 236

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           +  V I TAL+DMY+KC  L YA ++F+ +   + V+W+ +I G++ C+ + E   LF +
Sbjct: 237 EEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCDRMTEAFNLFKD 296

Query: 266 MIEENV-FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           M+ E + F S  ++ S +  C  +  L +G  LHA I ++G    L  +N+L+ MY K  
Sbjct: 297 MLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTASNSLLSMYAKAG 356

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            I  A   FD +  KD + + A++S   Q    ++AF +F  M+   + P+  TMV L+ 
Sbjct: 357 LINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSLIP 416

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
            C+   AL+ GK  H  +  +GL ++  +  +L+DMYAKCG ++ + ++F +   RD+  
Sbjct: 417 ACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKIDLSRQVFDKMPARDVVS 476

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           WN M+AGYG+HG G+EA   F+ M+  G  P+ +TFI L+ ACSH+GLVTEGK  FD M 
Sbjct: 477 WNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMT 536

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
           H  G++P++EHY CMVDLL R GLLDEA++ I+SMPL+ ++ VWGALL A ++HKN  +G
Sbjct: 537 HKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVWGALLGACRIHKNIDLG 596

Query: 565 EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
           +  +  I ++ P+  G  VL+SNI++ A R+++ A VR + K    KK PG+S +E+NG 
Sbjct: 597 KQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKKSPGYSWIEINGS 656

Query: 625 VHKFIRG 631
           +H F+ G
Sbjct: 657 LHAFVGG 663



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 228/467 (48%), Gaps = 14/467 (2%)

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV 179
           G L  AR +FD +P  D  +++ +IR Y   G    A+++ R M    + P++     ++
Sbjct: 48  GQLALARQVFDRIPAPDARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFVL 107

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
              + + D+  G+ IHA          L V  +TALID+Y +C     A+ +F ++    
Sbjct: 108 KACSALVDLRAGRTIHAHAAAAGLHTDLFV--STALIDLYIRCARFGPARNVFAKMPMRD 165

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPSEITILSLIIECGFVGGLQLGKWLH 298
           VV+W  M++GY      +  +    +M +   + P+  T++SL+      G L  G  +H
Sbjct: 166 VVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIH 225

Query: 299 AYILRNGFEFS---LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
           AY LR   E +   + +  AL+DMY KC+++  A  +F GM  ++ + W+A+I  +    
Sbjct: 226 AYCLRACLEQNEEQVLIGTALLDMYAKCKQLVYACRVFHGMPVRNDVTWSALIGGFVLCD 285

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVG-LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
            + +AF LF  M V  +     T V   L +C     L MG  LH  I K G+  D+   
Sbjct: 286 RMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHADLTAS 345

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
            +L+ MYAK G +N A   F E   +D   + A+++G   +G  EEA + F  M+   ++
Sbjct: 346 NSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNME 405

Query: 475 PNGITFIGLLNACSHAGLVTEGK-SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
           P+  T + L+ ACSH   +  GK S    ++ GL L   I     ++D+  + G +D + 
Sbjct: 406 PDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSI--CNSLIDMYAKCGKIDLSR 463

Query: 534 EMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYG 580
           ++   MP R +++ W  ++A   +H    +G+ A T  L ++ Q + 
Sbjct: 464 QVFDKMPAR-DVVSWNTMIAGYGIH---GLGKEATTLFLGMKNQGFA 506


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 221/595 (37%), Positives = 353/595 (59%), Gaps = 7/595 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + S++T   ++ +   A N++  M + G + D     ++LKAC        GK +H 
Sbjct: 271 LITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHA 330

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              + GLD + YV  AL+ MY++CGS+  A  +F+ +  R+VVSW+ MI G+ + G  EE
Sbjct: 331 RMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEE 390

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIAT 213
           A     +M    I P+ V  +S++   +  + +  G+ IH  +++     D++    + T
Sbjct: 391 AFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDR----VRT 446

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+ MY+KCG+L  A+ +F R+++ +VV+W  MI+ Y++  + +  V  F  +++E + P
Sbjct: 447 ALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKP 506

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T  S++  C     L+LGKW+ + I+R GFE  L + NALV M+  C ++ SA  LF
Sbjct: 507 DSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLF 566

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + M  +D++ WN +I+ + Q      AF+ F  M+ S V+P+++T  GLL+ C    AL 
Sbjct: 567 NDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALT 626

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            G+ LH  I +  L+ DV++ T L+ MY KCG ++ A+ +F     +++  W +M+ GY 
Sbjct: 627 EGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMITGYA 686

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            HG G+EAL  F  M++ GVKP+ ITF+G L+AC+HAGL+ EG   F+ M     + P++
Sbjct: 687 QHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KDFNIEPRM 745

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHYGCMVDL GRAGLL EA E I  M ++P+  +WGALL A ++H +  + E  A + LE
Sbjct: 746 EHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLE 805

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           ++P + G  V++SNIYA A  W +V  +R+VM +  V K+PG S +EV+G VH F
Sbjct: 806 LDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIEVDGRVHIF 860



 Score =  263 bits (673), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 156/526 (29%), Positives = 268/526 (50%), Gaps = 4/526 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I    R N+ +    K  + S A+ +   +     ++   T  ++L+ C +      G+ 
Sbjct: 66  IKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGER 125

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IH     + +  D ++ N LI MY++CG+  SA+ +FDEMP++DV SW+ ++ GY +   
Sbjct: 126 IHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRR 185

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            EEA  +  +M    ++P +   + M++  AD  +VD G  + + ++    D  L V   
Sbjct: 186 YEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVG-- 243

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           TALI+M+ KCG +  A ++FN L +  +++WT MI+G  R  +  +   LF  M EE V 
Sbjct: 244 TALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQ 303

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P ++  +SL+  C     L+ GK +HA +   G +  + +  AL+ MY KC  +  A  +
Sbjct: 304 PDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEV 363

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ +K ++V+ W A+I+ +AQ   +++AF  F  M  S + PN VT + +L  C+   AL
Sbjct: 364 FNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSAL 423

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           + G+ +H  I K G   D  ++TAL+ MYAKCG +  A  +F     +++  WNAM+  Y
Sbjct: 424 KQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAY 483

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             H   + A+  F  + + G+KP+  TF  +LN C     +  GK V   ++   G    
Sbjct: 484 VQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRA-GFESD 542

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +     +V +    G L  A  +   MP R +++ W  ++A    H
Sbjct: 543 LHIRNALVSMFVNCGDLMSAMNLFNDMPER-DLVSWNTIIAGFVQH 587



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 191/345 (55%), Gaps = 2/345 (0%)

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LI MY+KCGN   AKQ+F+ +    V SW +++ GY++     E  RL  +M+++ V P 
Sbjct: 145 LISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPD 204

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           + T + ++  C     +  G  L + IL  G++  L +  AL++M+ KC  +  A  +F+
Sbjct: 205 KYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFN 264

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            +  +D++ W ++I+  A+     +A  LF  M+   V+P++V  V LL  C    ALE 
Sbjct: 265 NLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQ 324

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           GK +H  +++ GL+ ++ + TAL+ MY KCG +  A  +F+    R++  W AM+AG+  
Sbjct: 325 GKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQ 384

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           HG  EEA +FF  M  SG++PN +TF+ +L ACS    + +G+ + D+++   G +    
Sbjct: 385 HGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKA-GYITDDR 443

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK 559
               ++ +  + G L +A  + + +  + N++ W A++ A   H+
Sbjct: 444 VRTALLSMYAKCGSLMDARNVFERIS-KQNVVAWNAMITAYVQHE 487


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 226/608 (37%), Positives = 359/608 (59%), Gaps = 6/608 (0%)

Query: 26  KFSYTNIINPL--TRYNSLVTSYIKNNKPSSALNIY-AFMRKNGSEVDNFTIPTILKACA 82
           K  +  I NPL  T +N L+ +  KN      L ++   +     + D FT P++LKAC+
Sbjct: 250 KLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACS 309

Query: 83  QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
            +     GK +H   IK+G   D  V ++ + MY++C     A  LFDEMP RDV SW+ 
Sbjct: 310 GLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNN 369

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           +I  Y++ G PE+ALE+  EM+    +P  V + +++S  A + D++ GK IH  +VR+ 
Sbjct: 370 VISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRS- 428

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
               L   +++AL+DMY KCG L  AK++F ++ + +VVSW  MI+GY    +    + L
Sbjct: 429 -GFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIEL 487

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F  M EE + P+  T+ S+++ C     LQLGK++H YI+RN  E  + + ++L+D+Y K
Sbjct: 488 FRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFK 547

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C  I SA  +F  M   +V+ WN +IS Y +     +A  +F  M+ + V+P+ +T   +
Sbjct: 548 CGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSV 607

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           L  C++   LE GK +H +I +  LE++ ++  AL+DMYAKCG V+ A  +F++   RD 
Sbjct: 608 LPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDF 667

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             W +M+A YG HG   EAL  F  M++S  KP+ +TF+ +L+ACSHAGLV EG   F++
Sbjct: 668 VSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQ 727

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP-LRPNMIVWGALLAASKLHKNP 561
           M+   G  P +EHY C++DLLGR G L EA+E+++  P +R ++ +   L +A  LHK  
Sbjct: 728 MIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKL 787

Query: 562 SMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
            +GE     ++E +P +    +++SN+YA   +W++V  VR  +KE+ +KK PG S +EV
Sbjct: 788 DLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEV 847

Query: 622 NGLVHKFI 629
              +H F+
Sbjct: 848 GKRIHPFV 855



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 7/165 (4%)

Query: 383 LSLCTEAGALE--MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
           L+  T   ALE  +GK +H  I   GL+ ++ L  +L+++Y  C     A  +F + I  
Sbjct: 200 LARVTAGSALEELLGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF-QTIEN 258

Query: 441 --DICMWNAMMAGYGMHGCGEEAL-IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
             DI +WN +MA    +    E L +F   +    +KP+  T+  +L ACS  G V  GK
Sbjct: 259 PLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGK 318

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
            V   ++   G    +      V +  +  + ++A ++   MP R
Sbjct: 319 MVHTHVIKS-GFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPER 362


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 227/601 (37%), Positives = 344/601 (57%), Gaps = 2/601 (0%)

Query: 29  YTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH 88
           YT     L  +N+++  Y +      A+ +Y  M+  G +    T   +L ACA      
Sbjct: 389 YTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYA 448

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
            GK IH   +++G+  + +++NAL+ MY  CGSL+ A+ +F+    RDV+SW++MI G+ 
Sbjct: 449 DGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHA 508

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           + G  E A ++ +EM+  ++ P  +   S++S   +   ++LGK IH  +  +    +L 
Sbjct: 509 QHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES--GLQLD 566

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V +  ALI+MY +CG+L  A+ +F+ L    V+SWT MI G     E  + + LF +M  
Sbjct: 567 VNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQN 626

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
           E   P + T  S++  C     L  GK + AYIL +G+E    + NAL+  Y K   +  
Sbjct: 627 EGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTD 686

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           AR +FD M S+D++ WN +I+ YAQ      A E    M+   V PN+ + V LL+ C+ 
Sbjct: 687 AREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSS 746

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
             ALE GK +H  I K+ L+ DV +  AL+ MYAKCG    A  +F   I +++  WNAM
Sbjct: 747 FSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAM 806

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +  Y  HG   +AL FF  ME+ G+KP+G TF  +L+AC+HAGLV EG  +F  M    G
Sbjct: 807 INAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYG 866

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
           ++P IEHYGC+V LLGRA    EA  +I  MP  P+  VW  LL A ++H N ++ E AA
Sbjct: 867 VLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAA 926

Query: 569 TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
              L++  +N    +L+SN+YA A RW+DVA +RRVM+   ++KEPG S +EV+ ++H+F
Sbjct: 927 NNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEF 986

Query: 629 I 629
           I
Sbjct: 987 I 987



 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 161/549 (29%), Positives = 284/549 (51%), Gaps = 11/549 (2%)

Query: 33  INP--LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           I+P  +  YN+++  Y +       L ++  M   G   D  T   +L A     M   G
Sbjct: 189 ISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEG 248

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           K IH   ++ GL+ D  V  AL+ M   CG + SA+  F    +RDVV ++ +I    + 
Sbjct: 249 KRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQH 308

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           G   EA E    MR   +  +    +S+++  +    ++ GK IH+ +  +       V 
Sbjct: 309 GHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSD--VQ 366

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           I  ALI MY++CG+L  A++LF  + +  ++SW  +I+GY R  +  E +RL+ +M  E 
Sbjct: 367 IGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEG 426

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           V P  +T L L+  C        GK +H  ILR+G + +  +ANAL++MY +C  +  A+
Sbjct: 427 VKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQ 486

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +F+G +++DV+ WN++I+ +AQ    + A++LF  M+  ++ P+ +T   +LS C    
Sbjct: 487 NVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPE 546

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           ALE+GK +H  I + GL++DV L  AL++MY +CG +  A  +F    +RD+  W AM+ 
Sbjct: 547 ALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIG 606

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGL 509
           G    G   +A+  F  M+  G +P   TF  +L  C+ +  + EGK V   +++ G  L
Sbjct: 607 GCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYEL 666

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
              + +   ++    ++G + +A E+   MP R +++ W  ++A    +    +G+ A  
Sbjct: 667 DTGVGN--ALISAYSKSGSMTDAREVFDKMPSR-DIVSWNKIIAG---YAQNGLGQTAVE 720

Query: 570 QILEIEPQN 578
              +++ Q+
Sbjct: 721 FAYQMQEQD 729



 Score =  274 bits (701), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 156/524 (29%), Positives = 281/524 (53%), Gaps = 10/524 (1%)

Query: 67  SEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSAR 126
           +E +  T   +L+ C +  +    K IH   ++  +  D ++SN LI MY +C S++ A 
Sbjct: 23  TETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAH 82

Query: 127 YLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            +F EMP RDV+SW+++I  Y + G  ++A ++  EM+     P+++  IS+++     A
Sbjct: 83  QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142

Query: 187 DVDLGKAIHACVVRNC--KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
           +++ GK IH+ +++    +D +    +  +L+ MY KCG+L  A+Q+F  ++   VVS+ 
Sbjct: 143 ELENGKKIHSQIIKAGYQRDPR----VQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYN 198

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
            M+  Y +   + E + LF +M  E + P ++T ++L+        L  GK +H   +  
Sbjct: 199 TMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE 258

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
           G    + +  ALV M  +C ++ SA+  F G   +DV+++NA+I+A AQ     +AFE +
Sbjct: 259 GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQY 318

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC 424
             M+   V  N  T + +L+ C+ + ALE GK +H++I + G   DV +  AL+ MYA+C
Sbjct: 319 YRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARC 378

Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
           GD+  A  LF     RD+  WNA++AGY       EA+  +  M+  GVKP  +TF+ LL
Sbjct: 379 GDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLL 438

Query: 485 NACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
           +AC+++    +GK + + ++   G+         ++++  R G L EA  + +    R +
Sbjct: 439 SACANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR-D 496

Query: 545 MIVWGALLAASKLHKN--PSMGEIAATQILEIEPQNYGYNVLMS 586
           +I W +++A    H +   +       Q  E+EP N  +  ++S
Sbjct: 497 VISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS 540



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 161/553 (29%), Positives = 272/553 (49%), Gaps = 9/553 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL++ Y +      A  ++  M+  G   +  T  +IL AC        GK+IH   I
Sbjct: 96  WNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQII 155

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   D  V N+L+ MY +CG L  AR +F  +  RDVVS++TM+  Y +    +E L 
Sbjct: 156 KAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLG 215

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M    I P +V  I+++  F   + +D GK IH   V    +    + + TAL+ M
Sbjct: 216 LFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSD--IRVGTALVTM 273

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
             +CG++  AKQ F       VV +  +I+   +     E    +  M  + V  +  T 
Sbjct: 274 CVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTY 333

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           LS++  C     L+ GK +H++I  +G    + + NAL+ MY +C ++  AR LF  M  
Sbjct: 334 LSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPK 393

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +D++ WNA+I+ YA+     +A  L+  M+   V+P  VT + LLS C  + A   GK +
Sbjct: 394 RDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMI 453

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I + G++ +  L  AL++MY +CG +  A  +F     RD+  WN+M+AG+  HG  
Sbjct: 454 HEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSY 513

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           E A   F +M+   ++P+ ITF  +L+ C +   +  GK +  ++    GL   +     
Sbjct: 514 ETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES-GLQLDVNLGNA 572

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           ++++  R G L +A  +  S+  R +++ W A++           GE      L  + QN
Sbjct: 573 LINMYIRCGSLQDARNVFHSLQHR-DVMSWTAMIGGC-----ADQGEDMKAIELFWQMQN 626

Query: 579 YGYNVLMSNIYAV 591
            G+  + S   ++
Sbjct: 627 EGFRPVKSTFSSI 639


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 226/608 (37%), Positives = 359/608 (59%), Gaps = 6/608 (0%)

Query: 26  KFSYTNIINPL--TRYNSLVTSYIKNNKPSSALNIY-AFMRKNGSEVDNFTIPTILKACA 82
           K  +  I NPL  T +N L+ +  KN      L ++   +     + D FT P++LKAC+
Sbjct: 58  KLVFQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACS 117

Query: 83  QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
            +     GK +H   IK+G   D  V ++ + MY++C     A  LFDEMP RDV SW+ 
Sbjct: 118 GLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNN 177

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           +I  Y++ G PE+ALE+  EM+    +P  V + +++S  A + D++ GK IH  +VR+ 
Sbjct: 178 VISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRS- 236

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
               L   +++AL+DMY KCG L  AK++F ++ + +VVSW  MI+GY    +    + L
Sbjct: 237 -GFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIEL 295

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F  M EE + P+  T+ S+++ C     LQLGK++H YI+RN  E  + + ++L+D+Y K
Sbjct: 296 FRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFK 355

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C  I SA  +F  M   +V+ WN +IS Y +     +A  +F  M+ + V+P+ +T   +
Sbjct: 356 CGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSV 415

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           L  C++   LE GK +H +I +  LE++ ++  AL+DMYAKCG V+ A  +F++   RD 
Sbjct: 416 LPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDF 475

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             W +M+A YG HG   EAL  F  M++S  KP+ +TF+ +L+ACSHAGLV EG   F++
Sbjct: 476 VSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQ 535

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP-LRPNMIVWGALLAASKLHKNP 561
           M+   G  P +EHY C++DLLGR G L EA+E+++  P +R ++ +   L +A  LHK  
Sbjct: 536 MIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKL 595

Query: 562 SMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
            +GE     ++E +P +    +++SN+YA   +W++V  VR  +KE+ +KK PG S +EV
Sbjct: 596 DLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEV 655

Query: 622 NGLVHKFI 629
              +H F+
Sbjct: 656 GKRIHPFV 663



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 5/171 (2%)

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           +   ++ LL  C ++  L+ GK +H  I   GL+ ++ L  +L+++Y  C     A  +F
Sbjct: 2   DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61

Query: 435 SEAIYR--DICMWNAMMAGYGMHGCGEEAL-IFFVDMERSGVKPNGITFIGLLNACSHAG 491
            + I    DI +WN +MA    +    E L +F   +    +KP+  T+  +L ACS  G
Sbjct: 62  -QTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120

Query: 492 LVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
            V  GK V   ++   G    +      V +  +  + ++A ++   MP R
Sbjct: 121 RVGYGKMVHTHVIKS-GFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPER 170


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/633 (36%), Positives = 369/633 (58%), Gaps = 35/633 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++++  +    + AL ++  M+++G + + F + +IL A A +     G+E+HG  +
Sbjct: 345 WNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLV 404

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +N L+ D  + +AL+ MYS+CG +  A  +F  +  R+ VS++ ++ GY + G  EEALE
Sbjct: 405 RNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALE 464

Query: 159 VMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           +  +M+  D I+P +    ++++L A+  + + G+ IHA ++R   +    + + T L+ 
Sbjct: 465 LYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIR--ANITKNIIVETELVH 522

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYS+CG L YAK++FNR+ + +  SW  MI GY +  E  E +RLF +M    + P   +
Sbjct: 523 MYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFS 582

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI----------- 326
           + S++  C  +   Q G+ LH +I+RN  E    +   LVDMY KC  +           
Sbjct: 583 LSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTI 642

Query: 327 --------------------RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
                                 A+ LFD M+ ++  +WN++++ YA      ++F  F+ 
Sbjct: 643 KKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLE 702

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG-LEVDVILKTALVDMYAKCG 425
           M  S +  + +TMV +++LC+   ALE G  LH+ I K+G +   V+L+TALVDMY+KCG
Sbjct: 703 MLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCG 762

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
            +  A  +F     ++I  WNAM++GY  HGC +EALI + +M + G+ PN +TF+ +L+
Sbjct: 763 AITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILS 822

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
           ACSH GLV EG  +F  M     +  K EHY CMVDLLGRAG L++A E ++ MP+ P +
Sbjct: 823 ACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEV 882

Query: 546 IVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVM 605
             WGALL A ++HK+  MG +AA ++ E++PQN G  V+MSNIYA A RW +V  +R++M
Sbjct: 883 STWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMM 942

Query: 606 KEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           K   VKK+PG S +E+N  +  F  G   + K+
Sbjct: 943 KMKGVKKDPGVSWIEINSEIQIFHAGSKTHPKT 975



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 279/552 (50%), Gaps = 35/552 (6%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y+K      A  I+  M K G   DNFT  + L+ C  +     GK++H   I
Sbjct: 244 WNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLI 303

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G  GD +V NALI MY++C    S   +FDEM  R+ V+W+++I    + G   +AL 
Sbjct: 304 ACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALV 363

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M+    + +   + S++   A +AD+  G+ +H  +VRN  +    + + +AL+DM
Sbjct: 364 LFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSD--IILGSALVDM 421

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM-IEENVFPSEIT 277
           YSKCG +  A Q+F  L + + VS+  +++GY++  +  E + L+ +M  E+ + P + T
Sbjct: 422 YSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFT 481

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             +L+  C        G+ +HA+++R     ++ +   LV MY +C  +  A+ +F+ M 
Sbjct: 482 FTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMA 541

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            ++   WN++I  Y Q     +A  LF  M+++ ++P+  ++  +LS C      + G+ 
Sbjct: 542 ERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRE 601

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI--------------- 442
           LH +I +  +E + IL+  LVDMYAKCG ++ A++++ + I +D+               
Sbjct: 602 LHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGR 661

Query: 443 ----------------CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
                            +WN+++AGY   G  +E+   F++M  S ++ + +T + ++N 
Sbjct: 662 ANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNL 721

Query: 487 CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
           CS    +  G  +   ++    +   +     +VD+  + G + +A  +  +M  + N++
Sbjct: 722 CSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGK-NIV 780

Query: 547 VWGALLAASKLH 558
            W A+++    H
Sbjct: 781 SWNAMISGYSKH 792



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 153/563 (27%), Positives = 273/563 (48%), Gaps = 17/563 (3%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           ++  T  +K N P S     +   K  S+V+     ++++ C        GK IH   I 
Sbjct: 41  HTTTTIKLKFNGPDSP-KPTSIHTKPASDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMIS 99

Query: 100 NGLDGDAYVSNALIQMYSECG---SLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
           NG + DAY+   ++ +Y+  G    L  AR LF+EMP R++ +W+TMI  Y R     E 
Sbjct: 100 NGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEV 159

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR---NCKDEKLGVAIAT 213
           L +   MR       +    S++     + D+   + + + VV+   NC      + +  
Sbjct: 160 LRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCN-----LFVGG 214

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+D Y++ G +  A    + +   SVV+W  +I+GY++     E   +F  M++  V P
Sbjct: 215 ALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCP 274

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T  S +  CG +     GK +H+ ++  GF+    + NAL+DMY KC +  S   +F
Sbjct: 275 DNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVF 334

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           D M  ++ + WN++ISA AQ    + A  LF+ M+ S  + N   +  +L        + 
Sbjct: 335 DEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIG 394

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            G+ LH ++ +  L  D+IL +ALVDMY+KCG V  A+++F   + R+   +NA++AGY 
Sbjct: 395 KGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYV 454

Query: 454 MHGCGEEALIFFVDME-RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             G  EEAL  + DM+   G++P+  TF  LL  C++     +G+ +   ++    +   
Sbjct: 455 QEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRA-NITKN 513

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH--KNPSMGEIAATQ 570
           I     +V +    G L+ A E+   M  R N   W +++   + +     ++      Q
Sbjct: 514 IIVETELVHMYSECGRLNYAKEIFNRMAER-NAYSWNSMIEGYQQNGETQEALRLFKQMQ 572

Query: 571 ILEIEPQNYGYNVLMSNIYAVAN 593
           +  I+P  +  + ++S+  ++++
Sbjct: 573 LNGIKPDCFSLSSMLSSCVSLSD 595



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 259/504 (51%), Gaps = 16/504 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG--KEI 93
           LT +N+++ +Y + +     L +Y  MR +G+  D FT P+++KAC  + M  +G  +++
Sbjct: 140 LTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKAC--IAMEDMGGVRQL 197

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
               +K GL+ + +V  AL+  Y+  G +  A    DE+    VV+W+ +I GY +    
Sbjct: 198 QSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSW 257

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           EEA  +   M  + + P      S + +   +   D GK +H+ ++  C   K    +  
Sbjct: 258 EEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIA-C-GFKGDTFVGN 315

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALIDMY+KC +     ++F+ + + + V+W  +IS   +    N+ + LF  M E     
Sbjct: 316 ALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKS 375

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +   + S+++    +  +  G+ LH +++RN     + + +ALVDMY KC  +  A  +F
Sbjct: 376 NRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVF 435

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGAL 392
             +  ++ + +NA+++ Y Q    ++A EL+  M+    ++P++ T   LL+LC      
Sbjct: 436 RSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRND 495

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
             G+ +H ++ +  +  ++I++T LV MY++CG +N A  +F+    R+   WN+M+ GY
Sbjct: 496 NQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGY 555

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             +G  +EAL  F  M+ +G+KP+  +   +L++C     V+   S   + +H   +   
Sbjct: 556 QQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSC-----VSLSDSQKGRELHNFIVRNT 610

Query: 513 IEHYG----CMVDLLGRAGLLDEA 532
           +E  G     +VD+  + G +D A
Sbjct: 611 MEEEGILQVVLVDMYAKCGSMDYA 634



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 193/403 (47%), Gaps = 66/403 (16%)

Query: 9   NLEQTRQCHAHIIKTHF------------------KFSYTN-IINPLTR-----YNSLVT 44
           N  Q RQ HAH+I+ +                   + +Y   I N +       +NS++ 
Sbjct: 494 NDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIE 553

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
            Y +N +   AL ++  M+ NG + D F++ ++L +C  +  +  G+E+H F ++N ++ 
Sbjct: 554 GYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEE 613

Query: 105 DAYVSNALIQMYSECGSLV-------------------------------SARYLFDEMP 133
           +  +   L+ MY++CGS+                                 A+ LFD+M 
Sbjct: 614 EGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQME 673

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
            R+   W++++ GY   GL +E+     EM   DI    + M+++V+L + +  ++ G  
Sbjct: 674 QRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQ 733

Query: 194 IHACVVR----NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
           +H+ +++    NC      V + TAL+DMYSKCG +  A+ +F+ +N  ++VSW  MISG
Sbjct: 734 LHSLIIKKGFVNC-----SVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISG 788

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEF 308
           Y +     E + L+ EM ++ ++P+E+T L+++  C   G ++ G  +   +  +   E 
Sbjct: 789 YSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEA 848

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
                  +VD+ G+   +  A+   + M    +V  W A++ A
Sbjct: 849 KAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGA 891


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 213/586 (36%), Positives = 355/586 (60%), Gaps = 2/586 (0%)

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           V+   K  +   AL I   M   G+ V +     +L+ CA++     G+E+H   +K+G+
Sbjct: 68  VSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 127

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
             + Y+ N L+ MY++CGSL  AR +FD + +R++VSW+ MI  +  G    EA +    
Sbjct: 128 QPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYET 187

Query: 163 MRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC 222
           M+    +P +V  +S+++ F +   + +G+ +H  + +     +L   + T+L+ MY+KC
Sbjct: 188 MKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAK--AGLELEPRVGTSLVGMYAKC 245

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI 282
           G+++ A+ +F++L + +VV+WT++I+GY +  +++  + L  +M +  V P++IT  S++
Sbjct: 246 GDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSIL 305

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
             C     L+ GK +H YI+++G+   + + NAL+ MY KC  ++ AR LF  +  +DV+
Sbjct: 306 QGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVV 365

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
            W A+++ YAQ    D+A +LF  M+   ++P+++T    L+ C+    L+ GK +H  +
Sbjct: 366 TWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQL 425

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
              G  +DV L++ALV MYAKCG ++ A  +F++   R++  W AM+ G   HG   EAL
Sbjct: 426 VHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREAL 485

Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDL 522
            +F  M++ G+KP+ +TF  +L+AC+H GLV EG+  F  M    G+ P +EHY C VDL
Sbjct: 486 EYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDL 545

Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYN 582
           LGRAG L+EA  +I +MP +P   VWGALL+A ++H +   GE AA  +L+++P + G  
Sbjct: 546 LGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAY 605

Query: 583 VLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           V +SNIYA A R+ D   VR+VM++  V KEPG S +EV+G VH F
Sbjct: 606 VALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVF 651



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 224/422 (53%), Gaps = 4/422 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + +++ +++  N+   A   Y  M+  G + D  T  ++L A     +  +G+++H 
Sbjct: 162 IVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHM 221

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              K GL+ +  V  +L+ MY++CG +  A+ +FD++P ++VV+W+ +I GY + G  + 
Sbjct: 222 EIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDV 281

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           ALE++ +M+  ++ P+++   S++        ++ GK +H  ++++    ++ V    AL
Sbjct: 282 ALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWV--VNAL 339

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I MY KCG L  A++LF  L    VV+WT M++GY +    +E + LF  M ++ + P +
Sbjct: 340 ITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDK 399

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T  S +  C     LQ GK +H  ++  G+   + + +ALV MY KC  +  AR +F+ 
Sbjct: 400 MTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQ 459

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M  ++V+ W A+I+  AQ     +A E F  MK   ++P++VT   +LS CT  G +E G
Sbjct: 460 MSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEG 519

Query: 396 -KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD-ICMWNAMMAGYG 453
            K   +     G++  V   +  VD+  + G +  A  +     ++    +W A+++   
Sbjct: 520 RKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACR 579

Query: 454 MH 455
           +H
Sbjct: 580 IH 581



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 120/255 (47%), Gaps = 6/255 (2%)

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
           G +  D +  +  +S   +   + +A  +   M +   R       GLL  C    +LE 
Sbjct: 55  GFRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQ 114

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G+ +H  I K G++ +  L+  L+ MYAKCG +  A R+F     R+I  W AM+  +  
Sbjct: 115 GREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVA 174

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKI 513
                EA   +  M+ +G KP+ +TF+ LLNA ++  L+  G+ V  ++   GL L P++
Sbjct: 175 GNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRV 234

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA--ASKLHKNPSMGEIAATQI 571
                +V +  + G + +A  +   +P + N++ W  L+A  A +   + ++  +   Q 
Sbjct: 235 G--TSLVGMYAKCGDISKAQVIFDKLPEK-NVVTWTLLIAGYAQQGQVDVALELLEKMQQ 291

Query: 572 LEIEPQNYGYNVLMS 586
            E+ P    Y  ++ 
Sbjct: 292 AEVAPNKITYTSILQ 306


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 217/595 (36%), Positives = 355/595 (59%), Gaps = 7/595 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + S++T   ++ +   A N++  M + G + D     ++L+AC        GK++H 
Sbjct: 277 LVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHA 336

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              + G D + YV  A++ MY++CGS+  A  +FD +  R+VVSW+ MI G+ + G  +E
Sbjct: 337 RMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDE 396

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC--KDEKLGVAIAT 213
           A     +M    I P+ V  +S++   +  + +  G+ I   ++      D++    + T
Sbjct: 397 AFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR----VRT 452

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+ MY+KCG+L  A ++F ++++ +VV+W  MI+ Y++  + +  +  F  +++E + P
Sbjct: 453 ALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP 512

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +  T  S++  C     L+LGKW+H  I++ G E  L ++NALV M+  C ++ SA+ LF
Sbjct: 513 NSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLF 572

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + M  +D++ WN +I+ + Q      AF+ F  M+ S ++P+++T  GLL+ C    AL 
Sbjct: 573 NDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALT 632

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            G+ LH  I +   + DV++ T L+ MY KCG +  A+++F +   +++  W +M+AGY 
Sbjct: 633 EGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYA 692

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            HG G+EAL  F  M++ GVKP+ ITF+G L+AC+HAGL+ EG   F  M     + P++
Sbjct: 693 QHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRM 751

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHYGCMVDL GRAGLL+EA E I  M + P+  VWGALL A ++H N  + E AA + LE
Sbjct: 752 EHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLE 811

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           ++P + G  V++SNIYA A  W +VA +R+VM +  V K+PG S +EV+G VH F
Sbjct: 812 LDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTF 866



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 160/526 (30%), Positives = 281/526 (53%), Gaps = 4/526 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I    + N+++    K  + + A+ +   +  +  ++   T   +L+ C +      G+ 
Sbjct: 72  IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           I+    K+G+  D ++ N LI MY++CG+ +SA+ +FD+M  +DV SW+ ++ GY + GL
Sbjct: 132 IYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            EEA ++  +M    ++P +   +SM++  AD  +VD G+ ++  +++   D  L V   
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVG-- 249

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           TALI+M+ KCG++  A ++F+ L    +V+WT MI+G  R     +   LF  M EE V 
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P ++  +SL+  C     L+ GK +HA +   G++  + +  A++ MY KC  +  A  +
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEV 369

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FD +K ++V+ W A+I+ +AQ   ID+AF  F  M  S + PN VT + +L  C+   AL
Sbjct: 370 FDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSAL 429

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           + G+ +  +I + G   D  ++TAL+ MYAKCG +  A+R+F +   +++  WNAM+  Y
Sbjct: 430 KRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAY 489

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             H   + AL  F  + + G+KPN  TF  +LN C  +  +  GK V   ++   GL   
Sbjct: 490 VQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVH-FLIMKAGLESD 548

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +     +V +    G L  A  +   MP R +++ W  ++A    H
Sbjct: 549 LHVSNALVSMFVNCGDLMSAKNLFNDMPKR-DLVSWNTIIAGFVQH 593



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 233/430 (54%), Gaps = 12/430 (2%)

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI---RPSEVAMISMVSLFADVADVDLG 191
           +D    + ++    + G   EA++V+  +    I   R +  A++ +   F ++ D   G
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGD---G 129

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           + I+  + ++    +  + +   LI+MY+KCGN   AKQ+F+ + +  V SW +++ GY+
Sbjct: 130 ERIYNHIKKS--GVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYV 187

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +     E  +L  +M++++V P + T +S++  C     +  G+ L+  IL+ G++  L 
Sbjct: 188 QHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLF 247

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           +  AL++M+ KC +I  A  +FD + ++D++ W ++I+  A+     +A  LF  M+   
Sbjct: 248 VGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEG 307

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           V+P++V  V LL  C    ALE GK +H  +++ G + ++ + TA++ MY KCG +  A 
Sbjct: 308 VQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDAL 367

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
            +F     R++  W AM+AG+  HG  +EA +FF  M  SG++PN +TF+ +L ACS   
Sbjct: 368 EVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPS 427

Query: 492 LVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
            +  G+ + D ++  G G   ++     ++ +  + G L +AH + + +  + N++ W A
Sbjct: 428 ALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNA 484

Query: 551 LLAASKLHKN 560
           ++ A   H+ 
Sbjct: 485 MITAYVQHEQ 494


>gi|296087881|emb|CBI35164.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 216/407 (53%), Positives = 280/407 (68%), Gaps = 21/407 (5%)

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
            W  +I+ Y + N+    + ++A++ + +         S++  CG V   QLGK +H ++
Sbjct: 126 QWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 185

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW----NAVISAYAQAHCI 357
           L+ G +  + + NAL+ MYG+C  +  AR +FD M  +DV+ W     A++  YA+   +
Sbjct: 186 LKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHL 245

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH-------------TYIEK 404
             A +LF  +    V    V+   +++ C  +  LE G  L              T + K
Sbjct: 246 GLARQLFNGLTQKTV----VSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLNK 301

Query: 405 QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIF 464
           + +EVD IL TALVDMYAKCGD+N A RLF EAI RDICMWNA++ G+ MHG GEEAL  
Sbjct: 302 ERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDI 361

Query: 465 FVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLG 524
           F +MER GVKPN ITFIGLL+ACSHAGLVTEGK +F+KMVH  GLVP+IEHYGCMVDLLG
Sbjct: 362 FAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLG 421

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVL 584
           RAGLLDEAHEMIKSMP++PN IVWGAL+AA +LHKNP +GE+AATQ+LEIEP+N GYNVL
Sbjct: 422 RAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVL 481

Query: 585 MSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           MSNIYA ANRW+D AGVR+ MK + +KKEPG S +EVNG VH+F+ G
Sbjct: 482 MSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMG 528



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 128/386 (33%), Positives = 194/386 (50%), Gaps = 68/386 (17%)

Query: 9   NLEQTRQCHAHIIKTHFKFS-------YTNIINPLTRYNSLVTSYIKNNKPSSALNIYAF 61
            LEQT+Q HAHIIKTHF  +       + + ++P  ++N ++TSY K N+P +ALN+YA 
Sbjct: 90  TLEQTKQIHAHIIKTHFHHALQIPLNDFPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQ 149

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           +RK   EVDNF  P++LKAC QV  T LGKEIHGF +K GLD D +V NAL+ MY EC  
Sbjct: 150 LRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECAC 209

Query: 122 LVSARYLFDEMPNRD-----------------------------------VVSWSTMIRG 146
           +  AR +FD+M  RD                                   VVSW+ MI G
Sbjct: 210 VEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAG 269

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
             R    EE  ++   M+  +I P+E+ M++      +  +VD       C++       
Sbjct: 270 CIRSNRLEEGTKLFIRMQEENIFPNEITMLN-----KERVEVD-------CILN------ 311

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
                 TAL+DMY+KCG++  A +LF       +  W  +I+G+       E + +FAEM
Sbjct: 312 ------TALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEM 365

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCRE 325
             + V P++IT + L+  C   G +  GK L   ++   G    +     +VD+ G+   
Sbjct: 366 ERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGL 425

Query: 326 IRSARTLFDGMKSK-DVMIWNAVISA 350
           +  A  +   M  K + ++W A+++A
Sbjct: 426 LDEAHEMIKSMPIKPNTIVWGALVAA 451



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 178/373 (47%), Gaps = 68/373 (18%)

Query: 139 SWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACV 198
            W+ +I  Y +   P  AL V  ++R MD         S++     V+   LGK IH  V
Sbjct: 126 QWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 185

Query: 199 VRNCKDEKLGVAIA---------------------------------TALIDMYSKCGNL 225
           ++   D  + V  A                                 TAL+DMY+KCG+L
Sbjct: 186 LKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWIPTTTALLDMYAKCGHL 245

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
             A+QLFN L Q +VVSWT MI+G IR N + EG +LF  M EEN+FP+EIT+L+     
Sbjct: 246 GLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLN----- 300

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
                            +   E    +  ALVDMY KC +I +A  LF    S+D+ +WN
Sbjct: 301 -----------------KERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWN 343

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL-----HT 400
           A+I+ +A     ++A ++F  M+   V+PN++T +GLL  C+ AG +  GK L     HT
Sbjct: 344 AIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHT 403

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMHG--- 456
           +    GL   +     +VD+  + G ++ A+ +  S  I  +  +W A++A   +H    
Sbjct: 404 F----GLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQ 459

Query: 457 CGEEALIFFVDME 469
            GE A    +++E
Sbjct: 460 LGELAATQLLEIE 472


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/600 (35%), Positives = 356/600 (59%), Gaps = 2/600 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           Y++++  + K +    AL  +  MR +  E   +    +LK C       +GKEIHG  +
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G   D +    L  MY++C  +  AR +FD MP RD+VSW+T++ GY + G+   ALE
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +++ M   +++PS + ++S++   + +  + +GK IH   +R+  D    V I+TAL+DM
Sbjct: 223 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL--VNISTALVDM 280

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG+L  A+QLF+ + + +VVSW  MI  Y++     E + +F +M++E V P+++++
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +  +  C  +G L+ G+++H   +  G + ++++ N+L+ MY KC+E+ +A ++F  ++S
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           + ++ WNA+I  +AQ      A   F  M+   V+P+  T V +++   E       KW+
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + +  L+ +V + TALVDMYAKCG +  A  +F     R +  WNAM+ GYG HG G
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           + AL  F +M++  +KPNG+TF+ +++ACSH+GLV  G   F  M     +   ++HYG 
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLLGRAG L+EA + I  MP++P + V+GA+L A ++HKN +  E AA ++ E+ P +
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDD 640

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
            GY+VL++NIY  A+ W  V  VR  M    ++K PG S VE+   VH F  G   +  S
Sbjct: 641 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDS 700



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 252/472 (53%), Gaps = 12/472 (2%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           ++I     KNGL  + +    L+ ++   GS+  A  +F+ + ++  V + TM++G+ + 
Sbjct: 54  RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
              ++AL+    MR+ D+ P       ++ +  D A++ +GK IH  +V++     L + 
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS--GFSLDLF 171

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
             T L +MY+KC  +  A+++F+R+ +  +VSW  +++GY +       + +   M EEN
Sbjct: 172 AMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN 231

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + PS ITI+S++     +  + +GK +H Y +R+GF+  + ++ ALVDMY KC  + +AR
Sbjct: 232 LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETAR 291

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            LFDGM  ++V+ WN++I AY Q     +A  +F  M    V+P +V+++G L  C + G
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
            LE G+++H    + GL+ +V +  +L+ MY KC +V+ A  +F +   R +  WNAM+ 
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           G+  +G   +AL +F  M    VKP+  T++ ++ A +   +         K +HG+ + 
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA-----KWIHGVVMR 466

Query: 511 PKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             ++        +VD+  + G +  A  +   M  R ++  W A++     H
Sbjct: 467 SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER-HVTTWNAMIDGYGTH 517



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 227/422 (53%), Gaps = 4/422 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N++V  Y +N     AL +   M +   +    TI ++L A + + +  +GKEIHG
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +A+++G D    +S AL+ MY++CGSL +AR LFD M  R+VVSW++MI  Y +   P+E
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+ + ++M    ++P++V+++  +   AD+ D++ G+ IH   V    D    V++  +L
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR--NVSVVNSL 378

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I MY KC  +  A  +F +L   ++VSW  MI G+ +     + +  F++M    V P  
Sbjct: 379 ISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDT 438

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T +S+I     +      KW+H  ++R+  + ++ +  ALVDMY KC  I  AR +FD 
Sbjct: 439 FTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDM 498

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M  + V  WNA+I  Y        A ELF  M+   ++PN VT + ++S C+ +G +E G
Sbjct: 499 MSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 558

Query: 396 -KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYG 453
            K  +   E   +E+ +    A+VD+  + G +N A+    +  +   + ++ AM+    
Sbjct: 559 LKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618

Query: 454 MH 455
           +H
Sbjct: 619 IH 620



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 196/378 (51%), Gaps = 4/378 (1%)

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T L+ ++ + G++  A ++F  ++    V +  M+ G+ + +++++ ++ F  M  ++V 
Sbjct: 73  TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P       L+  CG    L++GK +H  ++++GF   L     L +MY KCR++  AR +
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FD M  +D++ WN +++ Y+Q      A E+   M    ++P+ +T+V +L   +    +
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
            +GK +H Y  + G +  V + TALVDMYAKCG +  A +LF   + R++  WN+M+  Y
Sbjct: 253 SVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             +   +EA++ F  M   GVKP  ++ +G L+AC+  G +  G+ +  K+   LGL   
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI-HKLSVELGLDRN 371

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP--SMGEIAATQ 570
           +     ++ +  +   +D A  M   +  R  ++ W A++     +  P  ++   +  +
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSR-TLVSWNAMILGFAQNGRPIDALNYFSQMR 430

Query: 571 ILEIEPQNYGYNVLMSNI 588
              ++P  + Y  +++ I
Sbjct: 431 SRTVKPDTFTYVSVITAI 448



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 144/295 (48%), Gaps = 7/295 (2%)

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           + +NG          LV ++ +   +  A  +F+ + SK  ++++ ++  +A+   +DKA
Sbjct: 60  VFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKA 119

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
            + F+ M+   V P       LL +C +   L +GK +H  + K G  +D+   T L +M
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           YAKC  VN A ++F     RD+  WN ++AGY  +G    AL     M    +KP+ IT 
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
           + +L A S   L++ GK +    +   G    +     +VD+  + G L+ A ++   M 
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYAKCGSLETARQLFDGM- 297

Query: 541 LRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMSNIYAVAN 593
           L  N++ W +++ A   ++NP    +   ++L+  ++P +     +M  ++A A+
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS---VMGALHACAD 349


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 216/595 (36%), Positives = 354/595 (59%), Gaps = 7/595 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + S++T   ++ +   A N++  M + G + D     ++L+AC        GK++H 
Sbjct: 277 LVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHA 336

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              + G D + YV  A++ MY++CGS+  A  +FD +  R+VVSW+ MI G+ + G  +E
Sbjct: 337 RMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDE 396

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC--KDEKLGVAIAT 213
           A     +M    I P+ V  +S++   +  + +  G+ I   ++      D++    + T
Sbjct: 397 AFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDR----VRT 452

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+ MY+KCG+L  A ++F ++++ +VV+W  MI+ Y++  + +  +  F  +++E + P
Sbjct: 453 ALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP 512

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +  T  S++  C     L+LGKW+H  I++ G E  L ++NALV M+  C ++ SA+ LF
Sbjct: 513 NSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLF 572

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + M  +D++ WN +I+ + Q      AF+ F  M+ S ++P+++T  GLL+ C    AL 
Sbjct: 573 NDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALT 632

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            G+ LH  I +   + DV++ T L+ MY KCG +  A+++F +   +++  W +M+ GY 
Sbjct: 633 EGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYA 692

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            HG G+EAL  F  M++ GVKP+ ITF+G L+AC+HAGL+ EG   F  M     + P++
Sbjct: 693 QHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRM 751

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHYGCMVDL GRAGLL+EA E I  M + P+  VWGALL A ++H N  + E AA + LE
Sbjct: 752 EHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLE 811

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           ++P + G  V++SNIYA A  W +VA +R+VM +  V K+PG S +EV+G VH F
Sbjct: 812 LDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIEVDGKVHTF 866



 Score =  285 bits (730), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 160/526 (30%), Positives = 281/526 (53%), Gaps = 4/526 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I    + N+++    K  + + A+ +   +  +  ++   T   +L+ C +      G+ 
Sbjct: 72  IKDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGER 131

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           I+    K+G+  D ++ N LI MY++CG+ +SA+ +FD+M  +DV SW+ ++ GY + GL
Sbjct: 132 IYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGL 191

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            EEA ++  +M    ++P +   +SM++  AD  +VD G+ ++  +++   D  L V   
Sbjct: 192 YEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVG-- 249

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           TALI+M+ KCG++  A ++F+ L    +V+WT MI+G  R     +   LF  M EE V 
Sbjct: 250 TALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQ 309

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P ++  +SL+  C     L+ GK +HA +   G++  + +  A++ MY KC  +  A  +
Sbjct: 310 PDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEV 369

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FD +K ++V+ W A+I+ +AQ   ID+AF  F  M  S + PN VT + +L  C+   AL
Sbjct: 370 FDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSAL 429

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           + G+ +  +I + G   D  ++TAL+ MYAKCG +  A+R+F +   +++  WNAM+  Y
Sbjct: 430 KRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAY 489

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             H   + AL  F  + + G+KPN  TF  +LN C  +  +  GK V   ++   GL   
Sbjct: 490 VQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVH-FLIMKAGLESD 548

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +     +V +    G L  A  +   MP R +++ W  ++A    H
Sbjct: 549 LHVSNALVSMFVNCGDLMSAKNLFNDMPKR-DLVSWNTIIAGFVQH 593



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 233/430 (54%), Gaps = 12/430 (2%)

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI---RPSEVAMISMVSLFADVADVDLG 191
           +D    + ++    + G   EA++V+  +    I   R +  A++ +   F ++ D   G
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGD---G 129

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           + I+  + ++    +  + +   LI+MY+KCGN   AKQ+F+ + +  V SW +++ GY+
Sbjct: 130 ERIYNHIKKS--GVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYV 187

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +     E  +L  +M++++V P + T +S++  C     +  G+ L+  IL+ G++  L 
Sbjct: 188 QHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLF 247

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           +  AL++M+ KC +I  A  +FD + ++D++ W ++I+  A+     +A  LF  M+   
Sbjct: 248 VGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEG 307

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           V+P++V  V LL  C    ALE GK +H  +++ G + ++ + TA++ MY KCG +  A 
Sbjct: 308 VQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDAL 367

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
            +F     R++  W AM+AG+  HG  +EA +FF  M  SG++PN +TF+ +L ACS   
Sbjct: 368 EVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPS 427

Query: 492 LVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
            +  G+ + D ++  G G   ++     ++ +  + G L +AH + + +  + N++ W A
Sbjct: 428 ALKRGQQIQDHIIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNA 484

Query: 551 LLAASKLHKN 560
           ++ A   H+ 
Sbjct: 485 MITAYVQHEQ 494


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 227/603 (37%), Positives = 359/603 (59%), Gaps = 13/603 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+    K+   S ++ ++  M  +G E+D++T   + K+ + +   + G+++HG+ +
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYIL 222

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G      V N+L+  Y +   + SAR +FDEM  RDV+SW+++I GY   GL E+ L 
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVAD---VDLGKAIHACVVRNC--KDEKLGVAIAT 213
           V  +M F  I   E+ + ++VS+FA  AD   + LG+A+H   V+ C  ++++       
Sbjct: 283 VFVQMLFSGI---EIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRF----CN 335

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
            L+DMYSKCG+L  AK +F  ++  SVVS+T MI+GY R     E V+LF EM EE + P
Sbjct: 336 TLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T+ +++  C     L  GK +H +I  N   F + ++NAL+DMY KC  +R A  +F
Sbjct: 396 DVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVF 455

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGAL 392
             M+ KD++ WN VI  Y++    ++A  LF  + V K   P+E T+  +L  C    A 
Sbjct: 456 SEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAF 515

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           + G+ +H YI + G   D  +  +LVDMYAKCG +  A  LF +   +D+  W  M+AGY
Sbjct: 516 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGY 575

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
           GMHG G+EA+  F  M ++G++P+ I+F+ LL ACSH+GLV EG   F+ M H   + P 
Sbjct: 576 GMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPT 635

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           +EHY C+VD+L R G L +A+  I++MP+ P+  +WGALL   ++H +  + E  A ++ 
Sbjct: 636 VEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVF 695

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
           E+EP+N GY VLM+NIYA A +W +V  +R+ + +  ++K PG S +E+ G V+ F+ G 
Sbjct: 696 ELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGD 755

Query: 633 MVN 635
             N
Sbjct: 756 SSN 758



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 241/492 (48%), Gaps = 5/492 (1%)

Query: 68  EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY 127
           ++D  T+ ++L+ CA       GKE+  F   NG   D+ + + L  MY+ CG L  A  
Sbjct: 91  DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASR 150

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           +FD++     + W+ ++    + G    ++ + ++M    +         +   F+ +  
Sbjct: 151 VFDQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS 210

Query: 188 VDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           V+ G+ +H  ++++   E+   ++  +L+  Y K   +  A+++F+ + +  V+SW  +I
Sbjct: 211 VNGGEQLHGYILKSGFGER--NSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSII 268

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           +GY+      +G+ +F +M+   +     TI+S+   C     + LG+ +H + ++  F 
Sbjct: 269 NGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFS 328

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
                 N L+DMY KC ++ SA+ +F  M  + V+ + ++I+ YA+     +A +LF  M
Sbjct: 329 REDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEM 388

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           +   + P+  T+  +L+ C     L+ GK +H +I++  +  D+ +  AL+DMYAKCG +
Sbjct: 389 EEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSM 448

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL-IFFVDMERSGVKPNGITFIGLLNA 486
             A  +FSE   +DI  WN ++ GY  +    EAL +F + +      P+  T   +L A
Sbjct: 449 REAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPA 508

Query: 487 CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
           C+      +G+ +   ++   G          +VD+  + G L  A  +   +  + +++
Sbjct: 509 CASLSAFDKGREIHGYIMRN-GYFSDRHVANSLVDMYAKCGALLLARLLFDDITSK-DLV 566

Query: 547 VWGALLAASKLH 558
            W  ++A   +H
Sbjct: 567 SWTVMIAGYGMH 578


>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 700

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 225/619 (36%), Positives = 355/619 (57%), Gaps = 13/619 (2%)

Query: 16  CHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNG---SEVDNF 72
           CHAH      K         +  +N+L+ SY    K    L+++  M  +       DN+
Sbjct: 53  CHAH------KLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNY 106

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           T+   LK+C+ +    LGK IHGF  K  +D D +V +ALI++YS+CG +  A  +F E 
Sbjct: 107 TVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEY 166

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLG 191
           P +DVV W+++I GY + G PE AL     M  ++ + P  V ++S  S  A ++D +LG
Sbjct: 167 PKQDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLG 226

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           +++H  V R   D KL   +A +++++Y K G++  A  LF  +    ++SW+ M++ Y 
Sbjct: 227 RSVHGFVKRRGFDTKL--CLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYA 284

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
                   + LF EMI++ +  + +T++S +  C     L+ GK +H   +  GFE  + 
Sbjct: 285 DNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDIT 344

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           ++ AL+DMY KC   ++A  LF+ M  KDV+ W  + S YA+     K+  +F +M    
Sbjct: 345 VSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYG 404

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
            RP+ + +V +L+  +E G ++    LH ++ K G + +  +  +L+++YAKC  ++ A 
Sbjct: 405 TRPDAIALVKILAASSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNAN 464

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME-RSGVKPNGITFIGLLNACSHA 490
           ++F     +D+  W++++A YG HG GEEAL  F  M   S VKPN +TF+ +L+ACSHA
Sbjct: 465 KVFKGMRRKDVVTWSSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHA 524

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           GL+ EG  +F  MV+   L+P  EHYG MVDLLGR G LD+A +MI  MP++    VWGA
Sbjct: 525 GLIEEGIKMFHVMVNEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGA 584

Query: 551 LLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRV 610
           LL A ++H+N  +GE+AA  +  ++P + GY  L+SNIY V   W+D A +R ++KE R 
Sbjct: 585 LLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRF 644

Query: 611 KKEPGFSSVEVNGLVHKFI 629
           KK  G S VE+   VH FI
Sbjct: 645 KKIVGQSMVEIKNEVHSFI 663



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 238/480 (49%), Gaps = 26/480 (5%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           ++H   +K GL  D++V   L  +Y+   SL  A  LF+E P + V  W+ ++R Y   G
Sbjct: 22  QLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLWNALLRSYFLEG 81

Query: 152 LPEEALEVMREMR---FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
              E L +  +M      + RP    +   +   + +  ++LGK IH  + +   D  + 
Sbjct: 82  KWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGKMIHGFLKKKKIDNDMF 141

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V   +ALI++YSKCG +  A ++F    +  VV WT +I+GY +       +  F+ M+ 
Sbjct: 142 V--GSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNGSPELALAFFSRMVV 199

Query: 269 -ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
            E V P  +T++S    C  +    LG+ +H ++ R GF+  L +AN+++++YGK   IR
Sbjct: 200 LEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSILNLYGKTGSIR 259

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           SA  LF  M  KD++ W+++++ YA       A  LF  M   ++  N VT++  L  C 
Sbjct: 260 SAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNRVTVISALRACA 319

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
            +  LE GK +H      G E+D+ + TAL+DMY KC     A  LF+    +D+  W  
Sbjct: 320 SSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDLFNRMPKKDVVSWAV 379

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG--------KSV 499
           + +GY   G   ++L  F +M   G +P+ I  + +L A S  G+V +         KS 
Sbjct: 380 LFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIVQQALCLHAFVSKSG 439

Query: 500 FDKMVHGLGLVPKIEHYGC-MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           FD            E  G  +++L  +   +D A+++ K M  R +++ W +++AA   H
Sbjct: 440 FDNN----------EFIGASLIELYAKCSSIDNANKVFKGMR-RKDVVTWSSIIAAYGFH 488


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 214/591 (36%), Positives = 353/591 (59%), Gaps = 2/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y+KN    +A  ++  MR+  +  ++ T   +L  CA  +M + G ++HG  +
Sbjct: 216 WNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVV 275

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +GL+ D+ V+N L+ MY++CG L  AR LFD MP  D+V+W+ MI GY + G  +EA  
Sbjct: 276 SSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASC 335

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  EM    ++P  +   S + L ++ A +  GK IH  ++RN     L V + +ALID+
Sbjct: 336 LFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRN--GVSLDVFLKSALIDI 393

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC ++  A+++F++     +V  T MISGY+     N  + +F  +++E +  + +T+
Sbjct: 394 YFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTL 453

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  L LGK LH +IL+NG   S  + +A++DMY KC  +  A   F G+  
Sbjct: 454 ASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISD 513

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN++I++ +Q    ++A +LF  M ++  + + V++   LS C    AL  GK +
Sbjct: 514 KDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEI 573

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ +     D+  ++AL+DMY+KCG+++ A R+F     ++   WN+++A YG HG  
Sbjct: 574 HAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRL 633

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +++L  F  M   G++P+ +TF+ +++AC HAG V EG   F  M   LG++ ++EHY C
Sbjct: 634 KDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYAC 693

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDL GRAG L+EA  MI SMP  P+  VWG LL A +LH N  + E+A+  + +++PQN
Sbjct: 694 MVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQN 753

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            GY VL+SN++A A +W  V  +R +MKE  V+K PG S ++VN   H F+
Sbjct: 754 SGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFV 804



 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 163/520 (31%), Positives = 274/520 (52%), Gaps = 4/520 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  +    +   AL  Y  M   G+  D +T P ++KAC  +    LG+ +H    
Sbjct: 115 WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G + D +V ++LI+ YSE G +  ARYLFD MP++D V W+ M+ GY + G  + A  
Sbjct: 175 FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATG 234

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V  EMR  +  P+ V    ++S+ A    ++ G  +H  VV +    ++   +A  L+ M
Sbjct: 235 VFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSS--GLEMDSPVANTLLAM 292

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG+L  A++LF+ + +  +V+W  MISGY++   ++E   LF EMI   + P  IT 
Sbjct: 293 YAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITF 352

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +        L+ GK +H YI+RNG    + + +AL+D+Y KCR++  AR +FD    
Sbjct: 353 SSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTP 412

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D+++  A+IS Y      + A E+F  +   ++R N VT+  +L  C    AL +GK L
Sbjct: 413 VDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKEL 472

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H +I K G      + +A++DMYAKCG ++ A++ F     +D   WN+M+     +G  
Sbjct: 473 HGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKP 532

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           EEA+  F  M  +G K + ++    L+AC++   +  GK +   M+ G      +     
Sbjct: 533 EEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRG-AFRSDLFAESA 591

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           ++D+  + G LD A  +  +M  + N + W +++AA   H
Sbjct: 592 LIDMYSKCGNLDLACRVFDTMEEK-NEVSWNSIIAAYGNH 630



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 241/492 (48%), Gaps = 16/492 (3%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           +IL+ C        G++ H   + NG+  +  +   L+ MY  CG+ + A+ +F ++   
Sbjct: 51  SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
               W+ MIRG+   G  + AL    +M      P +     ++     +  V LG+ +H
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
             +       +L V + ++LI  YS+ G +  A+ LF+R+     V W VM++GY++  +
Sbjct: 171 DKI--QFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
            +    +F EM      P+ +T   ++  C     +  G  LH  ++ +G E    +AN 
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
           L+ MY KC  +  AR LFD M   D++ WN +IS Y Q   +D+A  LF  M  ++++P+
Sbjct: 289 LLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPD 348

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
            +T    L L +E   L  GK +H YI + G+ +DV LK+AL+D+Y KC DV  A ++F 
Sbjct: 349 SITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFD 408

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
           +    DI +  AM++GY ++G    AL  F  + +  ++ N +T   +L AC+    +T 
Sbjct: 409 QRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTL 468

Query: 496 GKSVFDKMVHGLGLVPKIEHYG-CMV-----DLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           GK +        G + K  H G C V     D+  + G LD AH+    +  + + + W 
Sbjct: 469 GKELH-------GHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDK-DAVCWN 520

Query: 550 ALLAASKLHKNP 561
           +++ +   +  P
Sbjct: 521 SMITSCSQNGKP 532



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 223/444 (50%), Gaps = 9/444 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N +++ Y++N     A  ++  M     + D+ T  + L   ++      GKEIH 
Sbjct: 314 LVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHC 373

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + I+NG+  D ++ +ALI +Y +C  +  AR +FD+    D+V  + MI GY   G+   
Sbjct: 374 YIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNN 433

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           ALE+ R +    +R + V + S++   A +A + LGK +H  +++N         + +A+
Sbjct: 434 ALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGS--CYVGSAI 491

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+KCG L  A Q F  ++    V W  MI+   +  +  E + LF +M         
Sbjct: 492 MDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDC 551

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           ++I + +  C  +  L  GK +HA+++R  F   L   +AL+DMY KC  +  A  +FD 
Sbjct: 552 VSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDT 611

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M+ K+ + WN++I+AY     +  +  LF  M    ++P+ VT + ++S C  AG ++ G
Sbjct: 612 MEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEG 671

Query: 396 -KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYG 453
             +     E+ G+   +     +VD++ + G +N A+ + +   +  D  +W  ++    
Sbjct: 672 IHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACR 731

Query: 454 MHGCGEEALI-----FFVDMERSG 472
           +HG  E A +     F +D + SG
Sbjct: 732 LHGNVELAEVASRNLFDLDPQNSG 755



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/306 (24%), Positives = 143/306 (46%), Gaps = 14/306 (4%)

Query: 254 NEINEGVRL-FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
           N +N G  L F+   ++++ P  ++IL     C    GL  G+  HA +L NG  ++  +
Sbjct: 27  NSVNIGKPLQFSIHNDDSLAPQLVSILQ---TCTDPSGLSQGRQAHAQMLVNGIGYNGIL 83

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
              L+ MY  C     A+ +F  ++      WN +I  +      D A   +  M     
Sbjct: 84  GTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGT 143

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR 432
            P++ T   ++  C    ++ +G+ +H  I+  G E+DV + ++L+  Y++ G ++ A  
Sbjct: 144 LPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARY 203

Query: 433 LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL 492
           LF     +D  +WN M+ GY  +G  + A   F++M R+   PN +TF  +L+ C+   +
Sbjct: 204 LFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIM 263

Query: 493 VTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL----GRAGLLDEAHEMIKSMPLRPNMIVW 548
           +      F   +HGL +   +E    + + L     + G L +A  +   MP + +++ W
Sbjct: 264 IN-----FGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMP-KTDLVTW 317

Query: 549 GALLAA 554
             +++ 
Sbjct: 318 NGMISG 323


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  430 bits (1106), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/603 (36%), Positives = 359/603 (59%), Gaps = 13/603 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+    K+   S ++ ++  M  +G E+D++T   + K+ + +   H G+++HGF +
Sbjct: 12  WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 71

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G      V N+L+  Y +   + SAR +FDEM  RDV+SW+++I GY   GL E+ L 
Sbjct: 72  KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 131

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVAD---VDLGKAIHACVVRNC--KDEKLGVAIAT 213
           V  +M    I   E+ + ++VS+FA  AD   + LG+A+H+  V+ C  ++++       
Sbjct: 132 VFVQMLVSGI---EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF----CN 184

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
            L+DMYSKCG+L  AK +F  ++  SVVS+T MI+GY R     E V+LF EM EE + P
Sbjct: 185 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 244

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T+ +++  C     L  GK +H +I  N   F + ++NAL+DMY KC  ++ A  +F
Sbjct: 245 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVF 304

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELF-IHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
             M+ KD++ WN +I  Y++    ++A  LF + ++  +  P+E T+  +L  C    A 
Sbjct: 305 SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF 364

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           + G+ +H YI + G   D  +  +LVDMYAKCG +  A+ LF +   +D+  W  M+AGY
Sbjct: 365 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGY 424

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
           GMHG G+EA+  F  M ++G++ + I+F+ LL ACSH+GLV EG   F+ M H   + P 
Sbjct: 425 GMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPT 484

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           +EHY C+VD+L R G L +A+  I++MP+ P+  +WGALL   ++H +  + E  A ++ 
Sbjct: 485 VEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVF 544

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
           E+EP+N GY VLM+NIYA A +W  V  +R+ + +  ++K PG S +E+ G V+ F+ G 
Sbjct: 545 ELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGD 604

Query: 633 MVN 635
             N
Sbjct: 605 SSN 607



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/431 (23%), Positives = 211/431 (48%), Gaps = 5/431 (1%)

Query: 129 FDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV 188
           FDE+     + W+ ++    + G    ++ + ++M    +         +   F+ +  V
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 189 DLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
             G+ +H  ++++   E+   ++  +L+  Y K   +  A+++F+ + +  V+SW  +I+
Sbjct: 61  HGGEQLHGFILKSGFGER--NSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIIN 118

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
           GY+      +G+ +F +M+   +     TI+S+   C     + LG+ +H+  ++  F  
Sbjct: 119 GYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSR 178

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
                N L+DMY KC ++ SA+ +F  M  + V+ + ++I+ YA+     +A +LF  M+
Sbjct: 179 EDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEME 238

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
              + P+  T+  +L+ C     L+ GK +H +I++  L  D+ +  AL+DMYAKCG + 
Sbjct: 239 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQ 298

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL-IFFVDMERSGVKPNGITFIGLLNAC 487
            A  +FSE   +DI  WN ++ GY  +    EAL +F + +E     P+  T   +L AC
Sbjct: 299 EAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 358

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           +      +G+ +   ++   G          +VD+  + G L  AH +   +  + +++ 
Sbjct: 359 ASLSAFDKGREIHGYIMRN-GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK-DLVS 416

Query: 548 WGALLAASKLH 558
           W  ++A   +H
Sbjct: 417 WTVMIAGYGMH 427


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 220/601 (36%), Positives = 352/601 (58%), Gaps = 12/601 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+ +Y  N     A+++Y  M   G   + FT P +LKAC+ +     G+EIH    
Sbjct: 87  WNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIK 146

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY--HRGGLPEEA 156
           +  L+ + YVS AL+  Y++CG L  A+ +FD+M  RDVV+W++MI G+  H G   E A
Sbjct: 147 RLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVA 206

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIATAL 215
             ++ +M+  D+ P+   ++ ++   A V  +  GK IH  CV R    +   V + T +
Sbjct: 207 -RLLVQMQ-NDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGD---VVVGTGI 261

Query: 216 IDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMI---EENV 271
           +D+Y KC  + YA+++F+ +    + V+W+ M+  Y+ C+ + E + LF +++   ++ +
Sbjct: 262 LDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVI 321

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
             S +T+ ++I  C  +  L  G  LH Y +++GF   L + N L+ MY KC  I  A  
Sbjct: 322 VLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMR 381

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
            F+ M  +D + + A+IS Y Q    ++   +F+ M++S + P + T+  +L  C     
Sbjct: 382 FFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAG 441

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L  G   H Y    G   D ++  AL+DMYAKCG ++ A ++F     R I  WN M+  
Sbjct: 442 LHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIA 501

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           YG+HG G EAL+ F +M+  G+KP+ +TFI L++ACSH+GLV EGK  F+ M    G++P
Sbjct: 502 YGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIP 561

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
           ++EHY CMVDLL RAGL  E H  I+ MPL P++ VWGALL+A +++KN  +GE  + +I
Sbjct: 562 RMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKI 621

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            ++ P++ G  VL+SN+Y+   RW+D A VR   KE   +K PG S +E++G+VH F+ G
Sbjct: 622 QKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVVHTFLGG 681

Query: 632 G 632
           G
Sbjct: 682 G 682



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 164/335 (48%), Gaps = 9/335 (2%)

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQ--NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           L+D+Y  C  L  A+ +F+++     +VV W ++I  Y       E + L+ +M+   + 
Sbjct: 57  LVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGIT 116

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P+  T   ++  C  +     G+ +H  I R   E ++ ++ ALVD Y KC  +  A+ +
Sbjct: 117 PNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEV 176

Query: 333 FDGMKSKDVMIWNAVISAYA-QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           FD M  +DV+ WN++IS ++      D+   L + M+ + V PN  T+VG+L    +  +
Sbjct: 177 FDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQ-NDVSPNSSTIVGVLPAVAQVNS 235

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS-EAIYRDICMWNAMMA 450
           L  GK +H +  ++G   DV++ T ++D+Y KC  ++ A R+F    I ++   W+AM+ 
Sbjct: 236 LRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVG 295

Query: 451 GYGMHGCGEEALIFFVD---MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
            Y +     EAL  F     ++   +  + +T   ++  C++   ++ G  +    +   
Sbjct: 296 AYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKS- 354

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
           G V  +     ++ +  + G+++ A      M LR
Sbjct: 355 GFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLR 389



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 140/276 (50%), Gaps = 22/276 (7%)

Query: 294 GKWLHAYILR--------NGFEFSLAMANALVDMYGKCREIRSARTLFDGM--KSKDVMI 343
           GK +H ++L+        N   F +     LVD+Y  C E++ AR +FD M  + K+V++
Sbjct: 28  GKLIHQHLLKCLHRTHETNLTNFDVPF-EKLVDLYIACSELKIARHVFDKMPHRPKNVVL 86

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           WN +I AYA     ++A +L+  M    + PN  T   +L  C+       G+ +H  I+
Sbjct: 87  WNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIK 146

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH-GCGEEAL 462
           +  LE +V + TALVD YAKCG ++ A  +F +   RD+  WN+M++G+ +H G  +E  
Sbjct: 147 RLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVA 206

Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLVPKIEHYGC 518
              V M+ + V PN  T +G+L A +    +  GK      +HG     G V  +     
Sbjct: 207 RLLVQMQ-NDVSPNSSTIVGVLPAVAQVNSLRHGKE-----IHGFCVRRGFVGDVVVGTG 260

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           ++D+ G+   +D A  +   M +  N + W A++ A
Sbjct: 261 ILDVYGKCQCIDYARRIFDMMGIVKNEVTWSAMVGA 296


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 223/603 (36%), Positives = 359/603 (59%), Gaps = 13/603 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+    K+   S ++ ++  M  +G E+D++T   + K+ + +   H G+++HGF +
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G      V N+L+  Y +   + SAR +FDEM  RDV+SW+++I GY   GL E+ L 
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVAD---VDLGKAIHACVVRNC--KDEKLGVAIAT 213
           V  +M    I   E+ + ++VS+FA  AD   + LG+A+H+  V+ C  ++++       
Sbjct: 283 VFVQMLVSGI---EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF----CN 335

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
            L+DMYSKCG+L  AK +F  ++  SVVS+T MI+GY R     E V+LF EM EE + P
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T+ +++  C     L  GK +H +I  N   F + ++NAL+DMY KC  ++ A  +F
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVF 455

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELF-IHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
             M+ KD++ WN +I  Y++    ++A  LF + ++  +  P+E T+  +L  C    A 
Sbjct: 456 SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF 515

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           + G+ +H YI + G   D  +  +LVDMYAKCG +  A+ LF +   +D+  W  M+AGY
Sbjct: 516 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGY 575

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
           GMHG G+EA+  F  M ++G++ + I+F+ LL ACSH+GLV EG   F+ M H   + P 
Sbjct: 576 GMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPT 635

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           +EHY C+VD+L R G L +A+  I++MP+ P+  +WGALL   ++H +  + E  A ++ 
Sbjct: 636 VEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVF 695

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
           E+EP+N GY VLM+NIYA A +W  V  +R+ + +  ++K PG S +E+ G V+ F+ G 
Sbjct: 696 ELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGD 755

Query: 633 MVN 635
             N
Sbjct: 756 SSN 758



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 128/532 (24%), Positives = 257/532 (48%), Gaps = 7/532 (1%)

Query: 28  SYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           S T     +T  N+ +  + ++    +A+ +     K   ++D  T+ ++L+ CA     
Sbjct: 53  SITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGK--WDIDPRTLCSVLQLCADSKSL 110

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
             GKE+  F   NG   D+ + + L  MY+ CG L  A  +FDE+     + W+ ++   
Sbjct: 111 KDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNEL 170

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
            + G    ++ + ++M    +         +   F+ +  V  G+ +H  ++++   E+ 
Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGER- 229

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
             ++  +L+  Y K   +  A+++F+ + +  V+SW  +I+GY+      +G+ +F +M+
Sbjct: 230 -NSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML 288

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
              +     TI+S+   C     + LG+ +H+  ++  F       N L+DMY KC ++ 
Sbjct: 289 VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLD 348

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           SA+ +F  M  + V+ + ++I+ YA+     +A +LF  M+   + P+  T+  +L+ C 
Sbjct: 349 SAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
               L+ GK +H +I++  L  D+ +  AL+DMYAKCG +  A  +FSE   +DI  WN 
Sbjct: 409 RYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNT 468

Query: 448 MMAGYGMHGCGEEAL-IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           ++ GY  +    EAL +F + +E     P+  T   +L AC+      +G+ +   ++  
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            G          +VD+  + G L  AH +   +  + +++ W  ++A   +H
Sbjct: 529 -GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMIAGYGMH 578


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 215/587 (36%), Positives = 352/587 (59%), Gaps = 3/587 (0%)

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           V+   K  +   AL I   M   G+ V +     +L+ CA++     G+E+H   +K+G+
Sbjct: 19  VSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGI 78

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
             + Y+ N L+ MY++CGSL  AR +FD + +R++VSW+ MI  +  G    EA +    
Sbjct: 79  QPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYET 138

Query: 163 MRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC 222
           M+    +P +V  +S+++ F +   + LG+ +H  +V      +L   + T+L+ MY+KC
Sbjct: 139 MKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVE--AGLELEPRVGTSLVGMYAKC 196

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI 282
           G+++ A+ +F+RL + +VV+WT++I+GY +  +++  + L   M +  V P++IT  S++
Sbjct: 197 GDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASIL 256

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
             C     L+ GK +H YI+++G+   L + N+L+ MY KC  +  AR LF  +  +DV+
Sbjct: 257 QGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVV 316

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
            W A+++ YAQ    D+A  LF  M+   ++P+++T   +L+ C+    L+ GK +H  +
Sbjct: 317 TWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQL 376

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG-YGMHGCGEEA 461
              G  +DV L++ALV MYAKCG ++ A  +F++   R++  W A++ G    HG   EA
Sbjct: 377 VHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREA 436

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVD 521
           L +F  M++ G+KP+ +TF  +L+AC+H GLV EG+  F  M    G+ P +EHY C VD
Sbjct: 437 LEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVD 496

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGY 581
           LLGRAG L+EA  +I SMP  P   VWGALL+A ++H +   GE AA  +L+++P + G 
Sbjct: 497 LLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGA 556

Query: 582 NVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            V +S+IYA A R+ D   VR+VM++  V KEPG S +EV+G VH F
Sbjct: 557 YVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVF 603



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 240/474 (50%), Gaps = 29/474 (6%)

Query: 9   NLEQTRQCHAHIIK-----------------------THFKFSYTNIINP-LTRYNSLVT 44
           +LEQ R+ HA I+K                       T  +  + +I +  +  + +++ 
Sbjct: 62  SLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIE 121

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
           +++  NK   A   Y  M+  G + D  T  ++L A     +  LG+++H   ++ GL+ 
Sbjct: 122 AFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLEL 181

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           +  V  +L+ MY++CG +  AR +FD +P ++VV+W+ +I GY + G  + ALE++  M+
Sbjct: 182 EPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQ 241

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
             ++ P+++   S++      A ++ GK +H  ++++    +L V    +LI MY KCG 
Sbjct: 242 QAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWV--VNSLITMYCKCGG 299

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           L  A++LF+ L    VV+WT M++GY +    +E + LF  M ++ + P ++T  S++  
Sbjct: 300 LEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTS 359

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
           C     LQ GK +H  ++  G+   + + +ALV MY KC  +  A  +F+ M  ++V+ W
Sbjct: 360 CSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAW 419

Query: 345 NAVISAYAQAHC-IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYI 402
            A+I+     H    +A E F  MK   ++P++VT   +LS CT  G +E G K   +  
Sbjct: 420 TAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMY 479

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYR-LFSEAIYRDICMWNAMMAGYGMH 455
              G++  V   +  VD+  + G +  A   + S        +W A+++   +H
Sbjct: 480 LDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVH 533



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 194/374 (51%), Gaps = 20/374 (5%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           L+  Y +  +   AL +   M++     +  T  +IL+ C        GK++H + I++G
Sbjct: 220 LIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSG 279

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
              + +V N+LI MY +CG L  AR LF ++P+RDVV+W+ M+ GY + G  +EA+ + R
Sbjct: 280 YGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFR 339

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
            M+   I+P ++   S+++  +  A +  GK IH  +V    +  L V + +AL+ MY+K
Sbjct: 340 RMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYN--LDVYLQSALVSMYAK 397

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISG----YIRCNEINEGVRLFAEMIEENVFPSEIT 277
           CG++  A  +FN++++ +VV+WT +I+G    + RC    E +  F +M ++ + P ++T
Sbjct: 398 CGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRC---REALEYFDQMKKQGIKPDKVT 454

Query: 278 ILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
             S++  C  VG ++ G K   +  L  G +  +   +  VD+ G+   +  A  +   M
Sbjct: 455 FTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSM 514

Query: 337 KS-KDVMIWNAVISA---YAQAHCIDKAFELFIHMKVSKVRPNEV-TMVGLLSLCTEAGA 391
                  +W A++SA   ++     ++A E      V K+ P++    V L S+   AG 
Sbjct: 515 PFIPGPSVWGALLSACRVHSDVERGERAAE-----NVLKLDPDDDGAYVALSSIYAAAGR 569

Query: 392 LEMGKWLHTYIEKQ 405
            E  + +   +EK+
Sbjct: 570 YEDAEKVRQVMEKR 583


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 221/596 (37%), Positives = 348/596 (58%), Gaps = 5/596 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++ +Y  +     ++ +Y  M + G    NFT P +LKAC+ +    LG+ IH  A 
Sbjct: 75  WNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAH 134

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP--NRDVVSWSTMIRGYHRGGLPEEA 156
             GL  D YVS AL+ MY++CG L  A+ LF+ +   +RD+V+W+ MI  +    L  + 
Sbjct: 135 ILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQT 194

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           +  + +M+   + P+   ++S++        +  GKAIHA  +RN   +   V + TAL+
Sbjct: 195 IHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFD--NVVLQTALL 252

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI-EENVFPSE 275
           DMY+KC  L YA+++FN +N+ + V W+ MI GY+  + I++ + L+ +M+    + P+ 
Sbjct: 253 DMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTP 312

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T+ +++  C  +  L+ GK LH +++++G +    + N+L+ MY KC  + +A    D 
Sbjct: 313 ATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDE 372

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M +KD + ++A+IS   Q    +KA  +F  M+ S + P   TM+ LL  C+   AL+ G
Sbjct: 373 MIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHG 432

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
              H Y   +G   D  +  A++DMY+KCG +  +  +F     RDI  WN M+ GYG+H
Sbjct: 433 TCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIH 492

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G   EAL  F +++  G+KP+ +T I +L+ACSH+GLVTEGK  F  M     + P++ H
Sbjct: 493 GLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAH 552

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y CMVDLL RAG LDEA+  I+ MP  PN+ +WGALLAA + HKN  MGE  + +I  + 
Sbjct: 553 YICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLG 612

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           P+  G  VLMSNIY+   RW+D A +R + +    KK PG S VE++G++H FI G
Sbjct: 613 PEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGG 668



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 222/437 (50%), Gaps = 7/437 (1%)

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           AR++FD++P   VV W+ MIR Y   G  ++++ +   M  + + P+      ++   + 
Sbjct: 60  ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSS 119

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQN--SVVS 242
           +  + LG+ IH     +     + + ++TAL+ MY+KCG+L  A+ LFN ++     +V+
Sbjct: 120 LQALQLGRLIHTHA--HILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVA 177

Query: 243 WTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYIL 302
           W  MI+ +       + +   A+M +  V P+  T++S++   G    L  GK +HAY +
Sbjct: 178 WNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYI 237

Query: 303 RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
           RN F  ++ +  AL+DMY KC  +  AR +F+ +  K+ + W+A+I  Y     I  A  
Sbjct: 238 RNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALA 297

Query: 363 LFIHMK-VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
           L+  M  +  + P   T+  +L  C +   L+ GK LH ++ K G+++D  +  +L+ MY
Sbjct: 298 LYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMY 357

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
           AKCG ++ A     E I +D   ++A+++G   +G  E+AL+ F  M+ SG+ P   T I
Sbjct: 358 AKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMI 417

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
            LL ACSH   +  G       V   G          ++D+  + G +  + E+   M  
Sbjct: 418 ALLPACSHLAALQHGTCCHGYTV-VRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQN 476

Query: 542 RPNMIVWGALLAASKLH 558
           R ++I W  ++    +H
Sbjct: 477 R-DIISWNTMIIGYGIH 492



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 166/327 (50%), Gaps = 6/327 (1%)

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
           A AT L   +     +  A+ +F+++ + SVV W +MI  Y       + + L+  M++ 
Sbjct: 42  AAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQL 101

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            V P+  T   L+  C  +  LQLG+ +H +    G    L ++ AL+ MY KC  +  A
Sbjct: 102 GVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQA 161

Query: 330 RTLFDGM--KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           +TLF+ +  + +D++ WNA+I+A++      +       M+ + V PN  T+V +L    
Sbjct: 162 QTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIG 221

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
           +A AL  GK +H Y  +     +V+L+TAL+DMYAKC  +  A ++F+    ++   W+A
Sbjct: 222 QANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSA 281

Query: 448 MMAGYGMHGCGEEALIFFVDME-RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH- 505
           M+ GY +H    +AL  + DM    G+ P   T   +L AC+    +  GK +   M+  
Sbjct: 282 MIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKS 341

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEA 532
           G+ L   +     ++ +  + G++D A
Sbjct: 342 GMDLDTTVG--NSLISMYAKCGIMDNA 366



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 127/256 (49%), Gaps = 4/256 (1%)

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
           S A A  L   +    EI+ AR +FD +    V++WN +I  YA +    ++  L++HM 
Sbjct: 40  SDAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHML 99

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
              V P   T   LL  C+   AL++G+ +HT+    GL +D+ + TAL+ MYAKCG + 
Sbjct: 100 QLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLY 159

Query: 429 GAYRLFSEAIY--RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
            A  LF+   +  RDI  WNAM+A +  H    + +     M+++GV PN  T + +L  
Sbjct: 160 QAQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPT 219

Query: 487 CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
              A  + +GK++    +        +     ++D+  +  LL  A ++  ++  + N +
Sbjct: 220 IGQANALHQGKAIHAYYIRNF-FFDNVVLQTALLDMYAKCHLLFYARKIFNTVN-KKNDV 277

Query: 547 VWGALLAASKLHKNPS 562
            W A++    LH + S
Sbjct: 278 CWSAMIGGYVLHDSIS 293


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 213/600 (35%), Positives = 353/600 (58%), Gaps = 2/600 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           Y +++  + K +    AL  +  MR +  E   +    +LK C       +GKEIHG  +
Sbjct: 103 YYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G   D +    L  MY++C  +  AR +FD MP RD+VSW+T++ GY + G+   ALE
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++  M   +++PS + ++S++   + +  + +GK IH   +R   D    V IATAL+DM
Sbjct: 223 MVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSL--VNIATALVDM 280

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG+L  A+ LF+ + + +VVSW  MI  Y++     E + +F +M++E V P+++++
Sbjct: 281 YAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSV 340

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +  +  C  +G L+ G+++H   +    + ++++ N+L+ MY KC+E+ +A ++F  ++S
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           + ++ WNA+I  +AQ     +A   F  M+   V+P+  T V +++   E       KW+
Sbjct: 401 RTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWI 460

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + +  L+ +V + TALVDMYAKCG +  A  +F     R +  WNAM+ GYG HG G
Sbjct: 461 HGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIG 520

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           + AL  F +M++  ++PNG+TF+ +++ACSH+GLV  G   F  M     + P ++HYG 
Sbjct: 521 KAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGA 580

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLLGRAG L+EA + I  MP++P + V+GA+L A ++HKN +  E  A ++ E+ P++
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPED 640

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
            GY+VL++NIY  A+ W  V  VR  M    ++K PG S VE+   VH F  G   +  S
Sbjct: 641 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPSS 700



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/423 (32%), Positives = 228/423 (53%), Gaps = 6/423 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N++V  Y +N     AL +   M +   +    TI ++L A + + +  +GKEIHG
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHG 260

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +A++ G D    ++ AL+ MY++CGSL +AR LFD M  R+VVSW++MI  Y +   P+E
Sbjct: 261 YAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKE 320

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+ + ++M    ++P++V+++  +   AD+ D++ G+ IH   V    D    V++  +L
Sbjct: 321 AMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDR--NVSVVNSL 378

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I MY KC  +  A  +F +L   ++VSW  MI G+ +     E +  F++M    V P  
Sbjct: 379 ISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDT 438

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T +S+I     +      KW+H  ++RN  + ++ +  ALVDMY KC  I  AR +FD 
Sbjct: 439 FTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDM 498

Query: 336 MKSKDVMIWNAVISAYAQAHCIDK-AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
           M  + V  WNA+I  Y   H I K A ELF  M+   +RPN VT + ++S C+ +G +E 
Sbjct: 499 MSERHVTTWNAMIDGYG-THGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEA 557

Query: 395 G-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGY 452
           G K  H   E   +E  +    A+VD+  + G +N A+    +  +   + ++ AM+   
Sbjct: 558 GLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGAC 617

Query: 453 GMH 455
            +H
Sbjct: 618 QIH 620



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 249/472 (52%), Gaps = 12/472 (2%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           + I     KNGL  +      L+ ++   GS+  A  +F+ +  +  V + TM++G+ + 
Sbjct: 54  RHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKV 113

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
              ++AL+    MR  ++ P       ++ +  D A++ +GK IH  +V++     L + 
Sbjct: 114 SDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS--GFSLDLF 171

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
             T L +MY+KC  +  A+++F+R+ +  +VSW  +++GY +       + +   M EEN
Sbjct: 172 AMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEEN 231

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + PS ITI+S++     +  +++GK +H Y +R GF+  + +A ALVDMY KC  +++AR
Sbjct: 232 LKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTAR 291

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            LFDGM  ++V+ WN++I AY Q     +A  +F  M    V+P +V+++G L  C + G
Sbjct: 292 LLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLG 351

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
            LE G+++H    +  L+ +V +  +L+ MY KC +V+ A  +F +   R I  WNAM+ 
Sbjct: 352 DLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMIL 411

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           G+  +G   EAL +F  M+   VKP+  T++ ++ A +   +         K +HG+ + 
Sbjct: 412 GFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHA-----KWIHGVVMR 466

Query: 511 PKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             ++        +VD+  + G +  A  +   M  R ++  W A++     H
Sbjct: 467 NCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER-HVTTWNAMIDGYGTH 517



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 197/382 (51%), Gaps = 7/382 (1%)

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T L+ ++ + G++  A ++F  +++   V +  M+ G+ + +++++ ++ F  M ++ V 
Sbjct: 73  TKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKALKFFVRMRDDEVE 132

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P       L+  CG    L++GK +H  ++++GF   L     L +MY KCR++  AR +
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKV 192

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FD M  +D++ WN +++ Y+Q      A E+   M    ++P+ +T+V +L   +    +
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLI 252

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
            +GK +H Y  + G +  V + TALVDMYAKCG +  A  LF   + R++  WN+M+  Y
Sbjct: 253 RIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAY 312

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             +   +EA++ F  M   GVKP  ++ +G L+AC+  G +  G+ +  K+   L L   
Sbjct: 313 VQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI-HKLSVELELDRN 371

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP--SMGEIAATQ 570
           +     ++ +  +   +D A  M   +  R  ++ W A++     +  P  ++   +  Q
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSR-TIVSWNAMILGFAQNGRPIEALNYFSQMQ 430

Query: 571 ILEIEPQNYGYNVLMSNIYAVA 592
              ++P  + Y   +S I A+A
Sbjct: 431 ARTVKPDTFTY---VSVITAIA 449



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 128/237 (54%), Gaps = 5/237 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N+++  + +N +P  ALN ++ M+    + D FT  +++ A A++ +TH  K IHG
Sbjct: 403 IVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHG 462

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             ++N LD + +V+ AL+ MY++CG+++ AR +FD M  R V +W+ MI GY   G+ + 
Sbjct: 463 VVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKA 522

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           ALE+  EM+   IRP+ V  +S++S  +    V+ G      +  N   E   +    A+
Sbjct: 523 ALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEP-SMDHYGAM 581

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           +D+  + G L  A   ++ + Q  V     +    +   +I++ V  FAE + E +F
Sbjct: 582 VDLLGRAGRLNEA---WDFIMQMPVKPAVNVYGAMLGACQIHKNVN-FAEKVAERLF 634



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 156/332 (46%), Gaps = 9/332 (2%)

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           I +NG          LV ++ +   +  A  +F+ +  K  +++  ++  +A+   +DKA
Sbjct: 60  IFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLKGFAKVSDLDKA 119

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
            + F+ M+  +V P       LL +C +   L +GK +H  + K G  +D+   T L +M
Sbjct: 120 LKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           YAKC  V+ A ++F     RD+  WN ++AGY  +G    AL     M    +KP+ IT 
Sbjct: 180 YAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITI 239

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
           + +L A S   L+  GK +    +   G    +     +VD+  + G L  A  +   M 
Sbjct: 240 VSVLPAVSALRLIRIGKEIHGYAMRA-GFDSLVNIATALVDMYAKCGSLKTARLLFDGM- 297

Query: 541 LRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMSNIYAVANRWNDV 598
           L  N++ W +++ A   ++NP    +   ++L+  ++P +     +M  ++A A+  +  
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVS---VMGALHACADLGDLE 354

Query: 599 AGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIR 630
            G  R + ++ V+ E   +   VN L+  + +
Sbjct: 355 RG--RFIHKLSVELELDRNVSVVNSLISMYCK 384


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 227/591 (38%), Positives = 337/591 (57%), Gaps = 17/591 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y  N     A++ Y  M   G   DNFT P ++KAC ++L   +G+++HG  I
Sbjct: 92  WNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLI 151

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G D D YV N LI MY + G +  A  +FDEMP RD+VSW++M+ GY   G    +L 
Sbjct: 152 KIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLM 211

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             +EM  +  +     MIS +   +    +  G  IH  V+R+  + +L + + T+LIDM
Sbjct: 212 CFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRS--ELELDIMVQTSLIDM 269

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCG + YA+++FNR+   ++V+W  MI G                  ++ V P  IT+
Sbjct: 270 YGKCGKVDYAERVFNRIYSKNIVAWNAMIGGMQE---------------DDKVIPDVITM 314

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           ++L+  C   G L  GK +H + +R  F   L +  ALVDMYGKC E++ A  +F+ M  
Sbjct: 315 INLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNE 374

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K+++ WN +++AY Q     +A ++F H+    ++P+ +T+  +L    E  +   GK +
Sbjct: 375 KNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQI 434

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H+YI K GL  +  +  A+V MYAKCGD+  A   F   + +D+  WN M+  Y +HG G
Sbjct: 435 HSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFG 494

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
             ++ FF +M   G KPNG TF+ LL ACS +GL+ EG   F+ M    G+ P IEHYGC
Sbjct: 495 RTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGC 554

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           M+DLLGR G LDEA   I+ MPL P   +WG+LLAAS+ H +  + E+AA  IL ++  N
Sbjct: 555 MLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDN 614

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            G  VL+SN+YA A RW DV  ++ +MKE  + K  G S V++NG    FI
Sbjct: 615 TGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMVDINGRSESFI 665



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 224/425 (52%), Gaps = 19/425 (4%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  +NS+V+ Y  +    S+L  +  M + G++ D F + + L AC+       G E
Sbjct: 187 VRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGME 246

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IH   I++ L+ D  V  +LI MY +CG +  A  +F+ + ++++V+W+ MI     GG+
Sbjct: 247 IHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMI-----GGM 301

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            E+            + P  + MI+++   +    +  GK+IH   +R      L   + 
Sbjct: 302 QEDD----------KVIPDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYL--VLE 349

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           TAL+DMY KCG L  A+ +FN++N+ ++VSW  M++ Y++  +  E +++F  ++ E + 
Sbjct: 350 TALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLK 409

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P  ITI S++     +     GK +H+YI++ G   +  ++NA+V MY KC ++++AR  
Sbjct: 410 PDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREF 469

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FDGM  KDV+ WN +I AYA       + + F  M+    +PN  T V LL+ C+ +G +
Sbjct: 470 FDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLI 529

Query: 393 EMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMA 450
           + G  + ++   + G++  +     ++D+  + G+++ A     E  +     +W +++A
Sbjct: 530 DEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLA 589

Query: 451 GYGMH 455
               H
Sbjct: 590 ASRNH 594



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 133/520 (25%), Positives = 245/520 (47%), Gaps = 39/520 (7%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+   +  + NKP  A        +    +      T  K  A+    ++ +++ GF +
Sbjct: 11  YNAYKNASPEQNKPPKAAQFKRKTTRKSPFIKRAQSKTSFKPLARPNDLNITRDLCGF-V 69

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++GL G+A                     +F++M + D   W+ +IRGY   GL +EA++
Sbjct: 70  ESGLMGNALD-------------------MFEKMNHSDTFIWNVIIRGYTNNGLFQEAID 110

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
               M    IR        ++    ++  + +G+ +H  +++   D  L V +   LIDM
Sbjct: 111 FYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFD--LDVYVCNFLIDM 168

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y K G +  A+++F+ +    +VSW  M+SGY    +    +  F EM+          +
Sbjct: 169 YLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGM 228

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +S +  C     L+ G  +H  ++R+  E  + +  +L+DMYGKC ++  A  +F+ + S
Sbjct: 229 ISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYS 288

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K+++ WNA+I    +                 KV P+ +TM+ LL  C+++GAL  GK +
Sbjct: 289 KNIVAWNAMIGGMQED---------------DKVIPDVITMINLLPSCSQSGALLEGKSI 333

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H +  ++     ++L+TALVDMY KCG++  A  +F++   +++  WN M+A Y  +   
Sbjct: 334 HGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQY 393

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +EAL  F  +    +KP+ IT   +L A +     +EGK +   ++  LGL         
Sbjct: 394 KEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMK-LGLGSNTFISNA 452

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +V +  + G L  A E    M  + +++ W  ++ A  +H
Sbjct: 453 IVYMYAKCGDLQTAREFFDGMVCK-DVVSWNTMIMAYAIH 491


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 236/609 (38%), Positives = 350/609 (57%), Gaps = 15/609 (2%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLM 86
           ++ I NP L  YN L+ ++  NN PSSA+++Y  +RK+   E DNFT   ++   + + +
Sbjct: 65  FSTIPNPDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGL 124

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
             L       +I  G   D +V +A++  Y +   + +AR +FD M  RD V W+TM+ G
Sbjct: 125 GLLLHAH---SIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSG 181

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
             +    +EA+ +  +M    I      + +++   A++ D+ LG  I       C   K
Sbjct: 182 LVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQ------CLAMK 235

Query: 207 LG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
           +G      + T L  +YSKCG +  A+ LF ++ Q  +VS+  MISGY   NE    VRL
Sbjct: 236 VGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRL 295

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F E++      +  +I+ LI      G L L + +H +  ++G   + +++ AL  +Y +
Sbjct: 296 FKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSR 355

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
             EI SAR LFD    K +  WNA+IS YAQ    +KA  LF  M+  +VRPN VT+  +
Sbjct: 356 LNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSI 415

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           LS C + GAL +GKW+H  I ++  E ++ + TAL+DMYAKCG +  A RLFS    ++ 
Sbjct: 416 LSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNA 475

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             WNAM++GYG+HG G EAL  F +M  S V P G+TF+ +L ACSHAGLV EG  +F  
Sbjct: 476 VTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRS 535

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
           MVH  G  P  EHY CMVDLLGRAG LD+A + I+ MP+ P   VWGALL A  +HK+ +
Sbjct: 536 MVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDAN 595

Query: 563 MGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
           +  +A+ ++ E++PQN GY VL+SNIY+    + + A VR V+K  ++ K PG + +EV 
Sbjct: 596 LARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVA 655

Query: 623 GLVHKFIRG 631
             +H F  G
Sbjct: 656 NTLHIFTSG 664



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 228/476 (47%), Gaps = 6/476 (1%)

Query: 83  QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
           +V   H   + H   I NGL  D      L    S   ++  A  LF  +PN D+  ++ 
Sbjct: 19  RVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNPDLFLYNV 78

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           +IR +     P  A+ +   +R       +    + V   A    + L    H+ V    
Sbjct: 79  LIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAHSIVAGFG 138

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
            D    + + +A++  Y K   +A A+++F+ + +   V W  M+SG ++ +  +E + +
Sbjct: 139 SD----LFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILI 194

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F +M++  +     T+ +++     +  L LG  +    ++ GF     +   L  +Y K
Sbjct: 195 FGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSK 254

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C EI +AR LF  +   D++ +NA+IS Y   +  + +  LF  + VS  + N  ++VGL
Sbjct: 255 CGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGL 314

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           + +    G L + + +H +  K G+  +  + TAL  +Y++  ++  A  LF E+  + +
Sbjct: 315 IPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSL 374

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             WNAM++GY  +G  E+A+  F +M++  V+PN +T   +L+AC+  G ++ GK V D 
Sbjct: 375 ASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHD- 433

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +++       I     ++D+  + G + EA  +   MP + N + W A+++   LH
Sbjct: 434 LINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEK-NAVTWNAMISGYGLH 488


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/603 (35%), Positives = 360/603 (59%), Gaps = 2/603 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N+L + Y+++     A+ ++  M ++G   + F+I  IL ACA +    LG++IHG
Sbjct: 148 VVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHG 207

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K GLD D + +NAL+ MYS+ G +  A  +F ++ + DVVSW+ +I G       + 
Sbjct: 208 LMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDL 267

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL ++ EM+    RP+   + S +   A +   +LG+ +H+ +++   D    +  A  L
Sbjct: 268 ALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIK--MDAHSDLFAAVGL 325

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMYSKC  +  A++ ++ + +  +++W  +ISGY +C +  + V LF++M  E++  ++
Sbjct: 326 VDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQ 385

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T+ +++     +  +++ K +H   +++G      + N+L+D YGKC  I  A  +F+ 
Sbjct: 386 TTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEE 445

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
              +D++ + ++I+AY+Q    ++A +L++ M+ + ++P+      LL+ C    A E G
Sbjct: 446 RTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQG 505

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           K LH +  K G   D+    +LV+MYAKCG +  A R FSE   R I  W+AM+ GY  H
Sbjct: 506 KQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQH 565

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G G+EAL  F  M R GV PN IT + +L AC+HAGLV EGK  F+KM    G+ P  EH
Sbjct: 566 GHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEH 625

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y CM+DLLGR+G L+EA E++ S+P   +  VWGALL A+++HKN  +G+ AA  + ++E
Sbjct: 626 YACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLE 685

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
           P+  G +VL++NIYA A  W +VA VR+ MK+ +VKKEPG S +E+   V+ FI G   +
Sbjct: 686 PEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSH 745

Query: 636 WKS 638
            +S
Sbjct: 746 SRS 748



 Score =  271 bits (693), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 160/527 (30%), Positives = 279/527 (52%), Gaps = 12/527 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  ++SL++ Y++N     AL ++  M   G + + FT P++LKAC+     ++G+++HG
Sbjct: 47  VVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHG 106

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+  G + D +V+N L+ MY++CG L  +R LF  +  R+VVSW+ +   Y +  L  E
Sbjct: 107 MAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGE 166

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+ + +EM    I P+E ++  +++  A + + DLG+ IH  +++   D  L    A AL
Sbjct: 167 AVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLD--LDQFSANAL 224

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI--RCNEINEGVRLFAEMIEENVFP 273
           +DMYSK G +  A  +F  +    VVSW  +I+G +   CN++   + L  EM      P
Sbjct: 225 VDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDL--ALMLLDEMKGSGTRP 282

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +  T+ S +  C  +G  +LG+ LH+ +++      L  A  LVDMY KC  +  AR  +
Sbjct: 283 NMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAY 342

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           D M  KD++ WNA+IS Y+Q      A  LF  M    +  N+ T+  +L       A++
Sbjct: 343 DSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIK 402

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           + K +HT   K G+  D  +  +L+D Y KC  ++ A ++F E  + D+  + +M+  Y 
Sbjct: 403 VCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYS 462

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL--GLVP 511
            +G GEEAL  ++ M+ + +KP+      LLNAC++     +GK +    VH +  G + 
Sbjct: 463 QYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLH---VHAIKFGFMC 519

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            I     +V++  + G +++A      +P R  ++ W A++     H
Sbjct: 520 DIFASNSLVNMYAKCGSIEDADRAFSEIPNR-GIVSWSAMIGGYAQH 565



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 230/464 (49%), Gaps = 6/464 (1%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           E+H   IK G   D  + N L+ +YS+C     AR L DE    DVVSWS+++ GY + G
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVA 210
             EEAL V  EM  + ++ +E    S++   +   D+++G+ +H   VV   + +     
Sbjct: 62  FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGF--- 118

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           +A  L+ MY+KCG L  +++LF  + + +VVSW  + S Y++     E V LF EM+   
Sbjct: 119 VANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSG 178

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + P+E +I  ++  C  +    LG+ +H  +L+ G +     ANALVDMY K  EI  A 
Sbjct: 179 IMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAV 238

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +F  +   DV+ WNA+I+      C D A  L   MK S  RPN  T+   L  C   G
Sbjct: 239 AVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMG 298

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
             E+G+ LH+ + K     D+     LVDMY+KC  ++ A R +     +DI  WNA+++
Sbjct: 299 FKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALIS 358

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           GY   G   +A+  F  M    +  N  T   +L + +    +   K +    +   G+ 
Sbjct: 359 GYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKS-GIY 417

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
                   ++D  G+   +DEA ++ +      +++ + +++ A
Sbjct: 418 SDFYVINSLLDTYGKCNHIDEASKIFEERTWE-DLVAYTSMITA 460


>gi|356514087|ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 225/619 (36%), Positives = 357/619 (57%), Gaps = 14/619 (2%)

Query: 16  CHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNG---SEVDNF 72
           CHAH      K         +  +N+L+ SY    K    L+++  M  +       DN+
Sbjct: 53  CHAH------KLFEETPCKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNY 106

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           T+   LK+C+ +    LGK IHGF +K  +D D +V +ALI++YS+CG +  A  +F E 
Sbjct: 107 TVSIALKSCSGLQKLELGKMIHGF-LKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEY 165

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLG 191
           P  DVV W+++I GY + G PE AL     M  ++ + P  V ++S  S  A ++D +LG
Sbjct: 166 PKPDVVLWTSIITGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLG 225

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           +++H  V R   D KL   +A +++++Y K G++  A  LF  +    ++SW+ M++ Y 
Sbjct: 226 RSVHGFVKRRGFDTKL--CLANSILNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYA 283

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
                   + LF EMI++ +  + +T++S +  C     L+ GK +H   +  GFE  + 
Sbjct: 284 DNGAETNALNLFNEMIDKRIELNRVTVISALRACASSSNLEEGKQIHKLAVNYGFELDIT 343

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           ++ AL+DMY KC    +A  LF+ M  KDV+ W  + S YA+     K+  +F +M  + 
Sbjct: 344 VSTALMDMYLKCFSPENAIELFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNG 403

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
            RP+ + +V +L+  +E G ++    LH ++ K G + +  +  +L+++YAKC  ++ A 
Sbjct: 404 TRPDAIALVKILAASSELGIVQQALCLHAFVTKSGFDNNEFIGASLIELYAKCSSIDNAN 463

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME-RSGVKPNGITFIGLLNACSHA 490
           ++F    + D+  W++++A YG HG GEEAL     M   S VKPN +TF+ +L+ACSHA
Sbjct: 464 KVFKGLRHTDVVTWSSIIAAYGFHGQGEEALKLSHQMSNHSDVKPNDVTFVSILSACSHA 523

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           GL+ EG  +F  MV+   L+P IEHYG MVDLLGR G LD+A +MI +MP++    VWGA
Sbjct: 524 GLIEEGIKMFHVMVNEYQLMPNIEHYGIMVDLLGRMGELDKALDMINNMPMQAGPHVWGA 583

Query: 551 LLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRV 610
           LL A ++H+N  +GE+AA  +  ++P + GY  L+SNIY V   W+D A +R ++KE R+
Sbjct: 584 LLGACRIHQNIKIGELAALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRL 643

Query: 611 KKEPGFSSVEVNGLVHKFI 629
           KK  G S VE+   VH FI
Sbjct: 644 KKIVGQSMVEIKNEVHSFI 662



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 241/491 (49%), Gaps = 31/491 (6%)

Query: 81  CAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSW 140
           C+++ +T L    H   +K GL  D++V   L  +Y+   SL  A  LF+E P + V  W
Sbjct: 15  CSKISITQL----HSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETPCKTVYLW 70

Query: 141 STMIRGYHRGGLPEEALEVMREMR---FMDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
           + ++R Y   G   E L +  +M      + RP    +   +   + +  ++LGK IH  
Sbjct: 71  NALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCSGLQKLELGKMIHGF 130

Query: 198 VVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN 257
           + +    +     + +ALI++YSKCG +  A ++F    +  VV WT +I+GY +     
Sbjct: 131 LKKKIDSDMF---VGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGYEQNGSPE 187

Query: 258 EGVRLFAEMIE-ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
             +  F+ M+  E V P  +T++S    C  +    LG+ +H ++ R GF+  L +AN++
Sbjct: 188 LALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLANSI 247

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           +++YGK   IR A  LF  M  KD++ W+++++ YA       A  LF  M   ++  N 
Sbjct: 248 LNLYGKTGSIRIAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIELNR 307

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           VT++  L  C  +  LE GK +H      G E+D+ + TAL+DMY KC     A  LF+ 
Sbjct: 308 VTVISALRACASSSNLEEGKQIHKLAVNYGFELDITVSTALMDMYLKCFSPENAIELFNR 367

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
              +D+  W  + +GY   G   ++L  F +M  +G +P+ I  + +L A S  G+V + 
Sbjct: 368 MPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSNGTRPDAIALVKILAASSELGIVQQA 427

Query: 497 --------KSVFDKMVHGLGLVPKIEHYGC-MVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
                   KS FD            E  G  +++L  +   +D A+++ K +    +++ 
Sbjct: 428 LCLHAFVTKSGFDNN----------EFIGASLIELYAKCSSIDNANKVFKGLR-HTDVVT 476

Query: 548 WGALLAASKLH 558
           W +++AA   H
Sbjct: 477 WSSIIAAYGFH 487



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 17/193 (8%)

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
           +V LL  C    ++     LH+   K GL +D  + T L  +YA+   +  A++LF E  
Sbjct: 7   LVKLLETCCSKISITQ---LHSQCLKVGLALDSFVVTKLNVLYARYASLCHAHKLFEETP 63

Query: 439 YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV---KPNGITFIGLLNACSHAGLVTE 495
            + + +WNA++  Y + G   E L  F  M    V   +P+  T    L +CS  GL   
Sbjct: 64  CKTVYLWNALLRSYFLEGKWVETLSLFHQMNADAVTEERPDNYTVSIALKSCS--GL--- 118

Query: 496 GKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
            K    KM+HG  L  KI+        +++L  + G +++A ++    P +P++++W ++
Sbjct: 119 QKLELGKMIHGF-LKKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYP-KPDVVLWTSI 176

Query: 552 LAASKLHKNPSMG 564
           +   + + +P + 
Sbjct: 177 ITGYEQNGSPELA 189


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/595 (35%), Positives = 352/595 (59%), Gaps = 4/595 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYA-FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           L  ++S+V+ Y +      AL ++    RK+G   + F + ++++AC Q+ +   G ++H
Sbjct: 115 LITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLH 174

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           GF +++G D D YV  +LI  YS+ G++  AR +FD++  +  V+W+T+I GY + G   
Sbjct: 175 GFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSA 234

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
            +LE+  +MR  ++ P    + S++S  + +  ++ GK IHA V+R  +  ++ V++   
Sbjct: 235 VSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLR--RGTEMDVSVVNV 292

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LID Y+KC  +   ++LF+++   +++SWT MISGY++ +   E ++LF EM      P 
Sbjct: 293 LIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPD 352

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
                S++  CG    L+ G+ +HAY ++   E    + N L+DMY K   +  A+ +FD
Sbjct: 353 GFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFD 412

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M  ++V+ +NA+I  Y+    + +A ELF  M+V   +PNE T   L++  +   +L  
Sbjct: 413 VMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRH 472

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G+  H  + K GL+    +  ALVDMYAKCG +  A ++F+ +I+RD+  WN+M++ +  
Sbjct: 473 GQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQ 532

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           HG  EEAL  F +M + G++PN +TF+ +L+ACSHAG V +G + F+ M  G G+ P  E
Sbjct: 533 HGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGTE 591

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HY C+V LLGR+G L EA E I+ MP+ P  IVW +LL+A ++  N  +G+ AA   +  
Sbjct: 592 HYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAIST 651

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +P++ G  +L+SNI+A    W DV  VR  M    V KEPG S +EVN  V+ FI
Sbjct: 652 DPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFI 706



 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 155/470 (32%), Positives = 260/470 (55%), Gaps = 7/470 (1%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           K IHG  I +GL  D +++N LI + S+   + +AR +FD+MP++++++WS+M+  Y + 
Sbjct: 69  KIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQ 128

Query: 151 GLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
           G  EEAL V  ++ R     P+E  + S++     +  V+ G  +H  VVR+  D+   V
Sbjct: 129 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQD--V 186

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            + T+LID YSK GN+  A+ +F++L++ + V+WT +I+GY +C      + LFA+M E 
Sbjct: 187 YVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRET 246

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
           NV P    + S++  C  +  L+ GK +HAY+LR G E  +++ N L+D Y KC  +++ 
Sbjct: 247 NVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAG 306

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           R LFD M  K+++ W  +IS Y Q     +A +LF  M     +P+      +L+ C   
Sbjct: 307 RKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSR 366

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            ALE G+ +H Y  K  LE D  +K  L+DMYAK   +  A ++F     +++  +NAM+
Sbjct: 367 EALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMI 426

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLG 508
            GY       EAL  F +M     KPN  TF  L+ A S+   +  G+   +++V  GL 
Sbjct: 427 EGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLD 486

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             P + +   +VD+  + G ++EA +M  S   R +++ W ++++    H
Sbjct: 487 FCPFVTN--ALVDMYAKCGSIEEARKMFNSSIWR-DVVCWNSMISTHAQH 533



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 171/322 (53%), Gaps = 7/322 (2%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           ++  +  + ++++ Y++N+    A+ ++  M + G + D F   ++L +C        G+
Sbjct: 314 VVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGR 373

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           ++H + IK  L+ D +V N LI MY++   L+ A+ +FD M  ++V+S++ MI GY    
Sbjct: 374 QVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQE 433

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
              EALE+  EMR    +P+E    ++++  +++A +  G+  H  +V+   D      +
Sbjct: 434 KLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLD--FCPFV 491

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
             AL+DMY+KCG++  A+++FN      VV W  MIS + +  E  E + +F EM++E +
Sbjct: 492 TNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGI 551

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN--ALVDMYGKCREIRSA 329
            P+ +T ++++  C   G ++ G  L+ +    GF       +   +V + G+  ++  A
Sbjct: 552 QPNYVTFVAVLSACSHAGRVEDG--LNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEA 609

Query: 330 RTLFDGMK-SKDVMIWNAVISA 350
           +   + M      ++W +++SA
Sbjct: 610 KEFIEKMPIEPAAIVWRSLLSA 631



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 24/206 (11%)

Query: 10  LEQTRQCHAHIIKTHFK------------FSYTNII------------NPLTRYNSLVTS 45
           LEQ RQ HA+ IK + +            ++ +N++              +  YN+++  
Sbjct: 369 LEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEG 428

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
           Y    K S AL ++  MR    + + FT   ++ A + +     G++ H   +K GLD  
Sbjct: 429 YSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFC 488

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
            +V+NAL+ MY++CGS+  AR +F+    RDVV W++MI  + + G  EEAL + REM  
Sbjct: 489 PFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMK 548

Query: 166 MDIRPSEVAMISMVSLFADVADVDLG 191
             I+P+ V  ++++S  +    V+ G
Sbjct: 549 EGIQPNYVTFVAVLSACSHAGRVEDG 574



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 90/188 (47%), Gaps = 3/188 (1%)

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           +++  +RP       LL L      +   K +H  I   GL+ D  L   L+++ +K   
Sbjct: 40  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 99

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER-SGVKPNGITFIGLLN 485
           V+ A  +F +  ++++  W++M++ Y   G  EEAL+ FVD++R SG  PN      ++ 
Sbjct: 100 VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 159

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
           AC+  G+V +G  +   +V   G    +     ++D   + G ++EA  +   +  +   
Sbjct: 160 ACTQLGVVEKGAQLHGFVVRS-GFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK-TA 217

Query: 546 IVWGALLA 553
           + W  ++A
Sbjct: 218 VTWTTIIA 225


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/600 (37%), Positives = 342/600 (57%), Gaps = 46/600 (7%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMP 133
           +++K C    M  L K+IH   I  GL  +  V   +I      E G +  AR +FD MP
Sbjct: 24  SLIKTCKS--MAQL-KQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMP 80

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
             +   W+ MI+GY R G P  A+ +  EM    + P E     ++  F     V  G+ 
Sbjct: 81  GPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRE 140

Query: 194 IHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
           +H  +V      KLG    V +  ALI +YS  G ++ A+ +F+R ++  VV+W VMISG
Sbjct: 141 LHDHIV------KLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISG 194

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
           Y R  + +E ++LF EM    V PS IT++S++  C  +  L +GK +H Y+     E  
Sbjct: 195 YNRSKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPV 254

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA------------------- 350
             + NAL+DMY  C ++ +A  +FD MKS+DV+ W A+++                    
Sbjct: 255 RVLENALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPE 314

Query: 351 ------------YAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
                       Y Q +   +   LF  M+ + ++P+E TMV +L+ C   GALE+G+W+
Sbjct: 315 RDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWI 374

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
             YI+K  +++D  +  AL+DMY  CG+V  A R+F+   +RD   W A++ G  ++G G
Sbjct: 375 KAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYG 434

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           EEAL  F  M ++ + P+ +T IG+L AC+H+G+V +GK  F +M    G+ P + HYGC
Sbjct: 435 EEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGC 494

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLLGRAG L EAHE+IK+MP++PN IVWG+LL A ++H++  M E+AA QILE+EP+N
Sbjct: 495 MVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMAEMAAQQILELEPEN 554

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
               VL+ NIYA  NRW  +  VR++M +  +KK PG S +E+NG VH+F+ G  V+ +S
Sbjct: 555 GAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNGSVHEFVAGDQVHPQS 614



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 236/450 (52%), Gaps = 35/450 (7%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y +   P+SA+++Y  M + G   D +T P +LK   +      G+E+H   +
Sbjct: 87  WNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIV 146

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   + +V NALI +YS  G +  AR +FD     DVV+W+ MI GY+R    +E+++
Sbjct: 147 KLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMK 206

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  EM  M + PS + ++S++S  + + D+++GK +H   V++ K E + V +  ALIDM
Sbjct: 207 LFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHR-YVKDLKIEPVRV-LENALIDM 264

Query: 219 YSKCGNL-------------------------------AYAKQLFNRLNQNSVVSWTVMI 247
           Y+ CG++                                 A+  F+++ +   VSWT MI
Sbjct: 265 YAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMI 324

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
            GY++ N   E + LF EM   N+ P E T++S++  C  +G L+LG+W+ AYI +N  +
Sbjct: 325 DGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIK 384

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
               + NAL+DMY  C  +  A  +F+ M  +D + W AVI   A     ++A ++F  M
Sbjct: 385 IDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQM 444

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGD 426
             + + P+EVT +G+L  CT +G ++ GK     +  Q G+E +V     +VD+  + G 
Sbjct: 445 LKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGH 504

Query: 427 VNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
           +  A+ +     +  +  +W +++    +H
Sbjct: 505 LKEAHEVIKNMPVKPNSIVWGSLLGACRVH 534



 Score = 45.4 bits (106), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 48/237 (20%), Positives = 101/237 (42%), Gaps = 11/237 (4%)

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK--CGDVNGAYRLFSEAIYR 440
           LSL     ++   K +H+     GL  + I+   ++    K   GD+  A  +F      
Sbjct: 23  LSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPGP 82

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           +  +WN M+ GY   GC   A+  + +M   GV P+  T+  LL   +    V  G+ + 
Sbjct: 83  NHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRELH 142

Query: 501 DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK- 559
           D +V  LG    +     ++ L   +G +  A  +      + +++ W  +++     K 
Sbjct: 143 DHIVK-LGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSS-KGDVVTWNVMISGYNRSKQ 200

Query: 560 -NPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR-VKKEP 614
            + SM      + + + P     ++ + ++ +  ++  D+   +RV + ++ +K EP
Sbjct: 201 FDESMKLFDEMERMRVLPS----SITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEP 253


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  424 bits (1091), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/609 (36%), Positives = 355/609 (58%), Gaps = 13/609 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+  Y+++ +    +++++ + + G E++ F   TILK    V    L   +H    
Sbjct: 9   FVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIY 68

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G + +A+V  ALI  Y+ CGS+ SAR  FD +  +D+VSW+ M+  Y      +++L+
Sbjct: 69  KLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQ 128

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  EMR +   P+      ++     +    +GK++H CV++ C +  L V +   L+D+
Sbjct: 129 LFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVG--LLDL 186

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G+     ++F  + ++ V+ W+ MIS Y + N+  E V LF +M    V P++ T 
Sbjct: 187 YTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTF 246

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  LQLGK +H ++L+ G + ++ ++NAL+D+Y KC  + ++  LF  + +
Sbjct: 247 ASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPN 306

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           ++ + WN +I  Y Q+   DKA  L+ +M   +V+ +EVT   +L  C    A+E+G  +
Sbjct: 307 RNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLAAMELGTQI 366

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H+   K   + DV++  AL+DMYAKCG +  A  +F     RD   WNAM++GY MHG  
Sbjct: 367 HSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMISGYSMHGLV 426

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F  M+ +   PN +TF+ +L+ACS+AGL+  G++ F  MV   G+ P +EHY C
Sbjct: 427 GEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYGIEPCMEHYTC 486

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MV LLGR+G LD+A ++I+ +PL PN+ VW ALL A  +H +  +G ++A QIL+I+PQ+
Sbjct: 487 MVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSAQQILQIDPQD 546

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG------- 631
              +VL+SNIYA   RWN VA VR+ MK   VKKEPG S +E  G+VH F  G       
Sbjct: 547 EATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYFSVGDTSHPDM 606

Query: 632 ----GMVNW 636
               GM+ W
Sbjct: 607 KMISGMLEW 615



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 236/422 (55%), Gaps = 4/422 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +  +V  Y +N++   +L ++A MR  G   ++FT   +LKAC  +    +GK +HG
Sbjct: 107 MVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHG 166

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K   + D YV   L+ +Y++ G       +F+EMP  DV+ WS MI  Y +     E
Sbjct: 167 CVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSRE 226

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+E+  +MR   + P++    S++   A + ++ LGK +H  V++   D    V ++ AL
Sbjct: 227 AVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDG--NVFVSNAL 284

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +D+Y+KCG L  + +LF  L   + V+W  MI GY++  + ++ + L+  M+E  V  SE
Sbjct: 285 MDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASE 344

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T  S++  C  +  ++LG  +H+  L+  ++  + + NAL+DMY KC  I++AR +FD 
Sbjct: 345 VTYSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDM 404

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +  +D + WNA+IS Y+    + +A + F  M+ ++  PN++T V +LS C+ AG L++G
Sbjct: 405 LSERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIG 464

Query: 396 K-WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYG 453
           + +  + ++  G+E  +   T +V +  + G ++ A +L  E  +  ++ +W A++    
Sbjct: 465 QNYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACV 524

Query: 454 MH 455
           +H
Sbjct: 525 IH 526



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 220/431 (51%), Gaps = 12/431 (2%)

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           MP+R+ VS+ T+I+GY +    +E +++   +       +     +++ L   V   +L 
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
            ++HAC+ +     +    + TALID Y+ CG++  A+Q F+ +    +VSWT M++ Y 
Sbjct: 61  YSLHACIYK--LGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYA 118

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
             +   + ++LFAEM      P+  T   ++  C  +    +GK +H  +L+  +E  L 
Sbjct: 119 ENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLY 178

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           +   L+D+Y K  +      +F+ M   DV+ W+ +IS YAQ++   +A ELF  M+ + 
Sbjct: 179 VGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAF 238

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           V PN+ T   +L  C     L++GK +H ++ K GL+ +V +  AL+D+YAKCG ++ + 
Sbjct: 239 VLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSM 298

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
           +LF E   R+   WN M+ GY   G G++AL  + +M    V+ + +T+  +L AC+   
Sbjct: 299 KLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLA 358

Query: 492 LVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
            +  G       +H L L    +        ++D+  + G +  A  ++  M    + I 
Sbjct: 359 AMELGTQ-----IHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNA-RLVFDMLSERDEIS 412

Query: 548 WGALLAASKLH 558
           W A+++   +H
Sbjct: 413 WNAMISGYSMH 423


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 211/577 (36%), Positives = 352/577 (61%), Gaps = 38/577 (6%)

Query: 91  KEIHGFAIKNGLDGDAYVSNAL--IQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           K+ H   I+ G+  D Y ++ L  I   S   SL  AR +FDE+P  +  +W+T+IR Y 
Sbjct: 48  KQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTLIRAYA 107

Query: 149 RGGLPEEALEVMREMRFMDIR--PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
            G  P  ++    +M   + +  P++     ++   A+V+ + LG+++H   +++     
Sbjct: 108 SGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSD 167

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
             V +A +LI  Y  CG+L  A ++F  + +  VVSW  MI+G+++    ++ + LF +M
Sbjct: 168 --VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM 225

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
             E+V  S +T++ ++  C  +  L+ G+ + +YI  N    +L +ANA++DMY KC  I
Sbjct: 226 ESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSI 285

Query: 327 RSARTLFDGMKS-------------------------------KDVMIWNAVISAYAQAH 355
             A+ LFD M+                                KD++ WNA+ISAY Q  
Sbjct: 286 EDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNG 345

Query: 356 CIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
             ++A  +F  +++ K ++ N++T+V  LS C + GALE+G+W+H+YI+K G++++  + 
Sbjct: 346 KPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVT 405

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
           +AL+ MY+KCGD+  A  +F+    RD+ +W+AM+ G  MHGCG EA+  F  M+ + VK
Sbjct: 406 SALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVK 465

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
           PNG+TF  +  ACSH GLV E +S+F KM    G+VP+ +HY C+VD+LGR+G L++A +
Sbjct: 466 PNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVK 525

Query: 535 MIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANR 594
            I++MP+ P+  VWGALL A K+H N S+ E+A T++LE+EP+N G +VL+SNIYA + +
Sbjct: 526 FIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGK 585

Query: 595 WNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           W++V+ +R+ M+   +KKEPG SS+E++G++H+F+ G
Sbjct: 586 WDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSG 622



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/513 (28%), Positives = 267/513 (52%), Gaps = 70/513 (13%)

Query: 9   NLEQTRQCHAHIIKT-------------------------HFKFSYTNIINPLT-RYNSL 42
           +L Q +Q HAH+I+T                         + +  +  I  P +  +N+L
Sbjct: 43  SLRQLKQTHAHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIPQPNSFTWNTL 102

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEV----DNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +Y     P    +I+AF+    SE     + +T P ++KA A+V    LG+ +HG AI
Sbjct: 103 IRAYASG--PDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAI 160

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+ +  D +V+N+LI  Y  CG L SA  +F  +  +DVVSW++MI G+ + G P++ALE
Sbjct: 161 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 220

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + ++M   D++ S V M+ ++S  A + D++ G+ + + +  N     + + +A A++DM
Sbjct: 221 LFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEEN--RVNVNLTLANAMLDM 278

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI--------------------------- 251
           Y+KCG++  AK+LF+ + +   V+WT M+ GY                            
Sbjct: 279 YTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALI 338

Query: 252 ----RCNEINEGVRLFAEM-IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
               +  + NE + +F E+ +++N+  ++IT++S +  C  VG L+LG+W+H+YI +NG 
Sbjct: 339 SAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGI 398

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
           + +  + +AL+ MY KC ++  AR +F+ ++ +DV +W+A+I   A   C  +A ++F  
Sbjct: 399 KMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYK 458

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCG 425
           M+ + V+PN VT   +   C+  G ++  + L   +E   G+  +      +VD+  + G
Sbjct: 459 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSG 518

Query: 426 DVNGAYRLFSEA--IYRDICMWNAMMAGYGMHG 456
            +  A + F EA  I     +W A++    +H 
Sbjct: 519 YLEKAVK-FIEAMPIPPSTSVWGALLGACKIHA 550


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/593 (36%), Positives = 346/593 (58%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N +++ Y  +     ++N++  M + G + +++T  +ILK  A V     G+++HG   
Sbjct: 219 WNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLIC 278

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G +    V N+LI  Y     +  A+ LFDE+ +RDV+SW++MI GY + GL +  +E
Sbjct: 279 KLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIE 338

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M    +      M+++    A++  + LGK +H+  ++    ++  V     L+DM
Sbjct: 339 IFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDR-EVRFNNTLLDM 397

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSKCG+L  A ++F R+++ +VVSWT MI+GY+R    +  ++LF EM    V P    +
Sbjct: 398 YSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAV 457

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C   G L+ GK +H YI  N  E +  ++NAL DMY KC  ++ A  +F  MK 
Sbjct: 458 TSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKK 517

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KDV+ WN +I  Y +    ++A  LF  M+  + +P+  T+  +L  C    AL+ G+ +
Sbjct: 518 KDVISWNTMIGGYTKNSLPNEALTLFAEMQ-RESKPDGTTVACILPACASLAALDKGREI 576

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H Y  + G   D  +  A+VDMY KCG +  A  LF     +D+  W  M+AGYGMHG G
Sbjct: 577 HGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYG 636

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EA+  F  M  +G++P+ ++FI +L ACSH+GL+ EG  +F+ M     + P +EHY C
Sbjct: 637 SEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYAC 696

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLL R G L +AH+ IK+MP++P+  +WGALL   ++H +  + E  A +I E+EP+N
Sbjct: 697 MVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPEN 756

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            GY VL++NIYA A +W +V  +R+ + +  +KK PG S +E+ G ++ F+ G
Sbjct: 757 TGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIEIKGKINIFVAG 809



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 154/541 (28%), Positives = 267/541 (49%), Gaps = 30/541 (5%)

Query: 67  SEVDNFTIP---TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLV 123
           S+  NF +    +IL+ CA+      G+ +      +G+  D  +   L+ MY +CG L 
Sbjct: 143 SQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLK 202

Query: 124 SARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFA 183
             R +FD++    +  W+ MI  Y   G   E++ + ++M  + I+P+     S++  FA
Sbjct: 203 EGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFA 262

Query: 184 DVADVDLGKAIHACVVRNCKDEKLGV----AIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
            VA V+ G+ +H  +       KLG      +  +LI  Y     +  A++LF+ L    
Sbjct: 263 AVARVEEGRQVHGLIC------KLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRD 316

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
           V+SW  MISGY++    + G+ +F +M+   V     T++++ + C  +G L LGK LH+
Sbjct: 317 VISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHS 376

Query: 300 YILRNG-FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
           Y ++    +  +   N L+DMY KC ++ SA  +F+ M  K V+ W ++I+ Y +    D
Sbjct: 377 YSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSD 436

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALV 418
            A +LF  MK   V P+   +  +L+ C   G L+ GK +H YI +  LE +  +  AL 
Sbjct: 437 GAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALT 496

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           DMYAKCG +  A+ +FS    +D+  WN M+ GY  +    EAL  F +M+R   KP+G 
Sbjct: 497 DMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGT 555

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH----YGCMVDLLGRAGLLDEAHE 534
           T   +L AC+    + +G+      +HG  L             +VD+  + GLL  A  
Sbjct: 556 TVACILPACASLAALDKGRE-----IHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARS 610

Query: 535 MIKSMPLRPNMIVWGALLAASKLH--KNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVA 592
           +   +P   +++ W  ++A   +H   + ++      ++  IEP    +   +S +YA +
Sbjct: 611 LFDMIP-NKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSF---ISILYACS 666

Query: 593 N 593
           +
Sbjct: 667 H 667


>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera]
 gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  424 bits (1089), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/606 (36%), Positives = 353/606 (58%), Gaps = 8/606 (1%)

Query: 24  HFKFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSE-VDNFTIPTILKAC 81
           H +  +  + NP L  +N+++  Y  +     AL ++  M  +G    DN+T P ++KAC
Sbjct: 74  HARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKAC 133

Query: 82  AQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWS 141
              L+  +G  IH   + +G D DA+V N+L+ MY  CG +  AR +FD M  R +VSW+
Sbjct: 134 GDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWN 193

Query: 142 TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACV-VR 200
           TMI GY + G  +EAL V   M    I P    ++S++ + + + ++++G+ +HA V V+
Sbjct: 194 TMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVK 253

Query: 201 NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
           N  ++   +++  +L+DMY+KCGN+  A+ +F  +++  VVSWT M++GYI   +    +
Sbjct: 254 NLGED---ISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSAL 310

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
            L   M  E+V P+ +T+ S++  C  +  L+ G+ LH + +R   E  + +  AL+DMY
Sbjct: 311 LLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMY 370

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
            KC  +  +  +F     +    WNA+IS         KA ELF  M +  V PN+ T+ 
Sbjct: 371 AKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLN 430

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS--EAI 438
            LL        L+  + +H Y+ + G    + + T L+D+Y+KCG +  A+ +F+     
Sbjct: 431 SLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKK 490

Query: 439 YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKS 498
            +DI  W+A++AGYGMHG GE A+  F  M +SGVKPN ITF  +L+ACSHAGLV EG  
Sbjct: 491 DKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLG 550

Query: 499 VFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +F  M+    +  + +HY C++DLLGRAG L+EA+E+I++M  RPN  VWGALL +  +H
Sbjct: 551 LFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIH 610

Query: 559 KNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSS 618
           +N  +GE+AA  + E+EP N G  VL++NIY+   RW D   VR +M  I ++K P  S 
Sbjct: 611 ENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSL 670

Query: 619 VEVNGL 624
           +EV  +
Sbjct: 671 IEVRNI 676



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/488 (29%), Positives = 252/488 (51%), Gaps = 8/488 (1%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAY---VSNALIQMYSECGSLVSARYLFDEM 132
           ++L+ C         K+IH   I  GL    Y   + ++L   Y+  G    AR LFDE+
Sbjct: 23  SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDEL 82

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR-PSEVAMISMVSLFADVADVDLG 191
            N  + SW+ MIR Y   GL  +AL +  +M     R P       ++    D    ++G
Sbjct: 83  RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMG 142

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
             IHA  V +  D      +  +L+ MY  CG +  A+++F+ + + ++VSW  MI+GY 
Sbjct: 143 ALIHARTVMSGFDSD--AFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYF 200

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +   + E + +F  MI + + P   T++S++  C ++  L++G+ +HA +        ++
Sbjct: 201 KNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDIS 260

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           + N+L+DMY KC  +  A+ +F  M  +DV+ W  +++ Y        A  L   M+   
Sbjct: 261 VWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFES 320

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           V+PN VT+  +LS C    +L+ G+ LH +  +Q LE +VI++TAL+DMYAKC +VN ++
Sbjct: 321 VKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSF 380

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
           R+FS+   +    WNA+++G   +G   +A+  F  M    V PN  T   LL A +   
Sbjct: 381 RVFSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLT 440

Query: 492 LVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR-PNMIVWGA 550
            + + +++   ++   G + +IE    ++D+  + G L+ AH +   +P +  ++I W A
Sbjct: 441 DLQQARNMHGYLIRS-GFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSA 499

Query: 551 LLAASKLH 558
           ++A   +H
Sbjct: 500 IIAGYGMH 507


>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/606 (36%), Positives = 353/606 (58%), Gaps = 8/606 (1%)

Query: 24  HFKFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSE-VDNFTIPTILKAC 81
           H +  +  + NP L  +N+++  Y  +     AL ++  M  +G    DN+T P ++KAC
Sbjct: 74  HARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKAC 133

Query: 82  AQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWS 141
              L+  +G  IH   + +G D DA+V N+L+ MY  CG +  AR +FD M  R +VSW+
Sbjct: 134 GDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWN 193

Query: 142 TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACV-VR 200
           TMI GY + G  +EAL V   M    I P    ++S++ + + + ++++G+ +HA V V+
Sbjct: 194 TMINGYFKNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVK 253

Query: 201 NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
           N  ++   +++  +L+DMY+KCGN+  A+ +F  +++  VVSWT M++GYI   +    +
Sbjct: 254 NLGED---ISVWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSAL 310

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
            L   M  E+V P+ +T+ S++  C  +  L+ G+ LH + +R   E  + +  AL+DMY
Sbjct: 311 LLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMY 370

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
            KC  +  +  +F     +    WNA+IS         KA ELF  M +  V PN+ T+ 
Sbjct: 371 AKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLN 430

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS--EAI 438
            LL        L+  + +H Y+ + G    + + T L+D+Y+KCG +  A+ +F+     
Sbjct: 431 SLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKK 490

Query: 439 YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKS 498
            +DI  W+A++AGYGMHG GE A+  F  M +SGVKPN ITF  +L+ACSHAGLV EG  
Sbjct: 491 DKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLG 550

Query: 499 VFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +F  M+    +  + +HY C++DLLGRAG L+EA+E+I++M  RPN  VWGALL +  +H
Sbjct: 551 LFKFMLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIH 610

Query: 559 KNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSS 618
           +N  +GE+AA  + E+EP N G  VL++NIY+   RW D   VR +M  I ++K P  S 
Sbjct: 611 ENVELGEVAAKWLFELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSL 670

Query: 619 VEVNGL 624
           +EV  +
Sbjct: 671 IEVRNI 676



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 253/488 (51%), Gaps = 8/488 (1%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAY---VSNALIQMYSECGSLVSARYLFDEM 132
           ++L+ C         K+IH   I  GL    Y   + ++L   Y+ CG    AR LFDE+
Sbjct: 23  SLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDEL 82

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR-PSEVAMISMVSLFADVADVDLG 191
            N  + SW+ MIR Y   GL  +AL +  +M     R P       ++    D    ++G
Sbjct: 83  RNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPEMG 142

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
             IHA  V +  D      +  +L+ MY  CG +  A+++F+ + + ++VSW  MI+GY 
Sbjct: 143 ALIHARTVMSGFDSD--AFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYF 200

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +   + E + +F  MI + + P   T++S++  C ++  L++G+ +HA +        ++
Sbjct: 201 KNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDIS 260

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           + N+L+DMY KC  +  A+ +F  M  +DV+ W  +++ Y        A  L   M+   
Sbjct: 261 VWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFES 320

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           V+PN VT+  +LS C    +L+ G+ LH +  +Q LE +VI++TAL+DMYAKC +VN ++
Sbjct: 321 VKPNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSF 380

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
           R+FS+   +    WNA+++G   +G   +A+  F  M    V PN  T   LL A +   
Sbjct: 381 RVFSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLT 440

Query: 492 LVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR-PNMIVWGA 550
            + + +++   ++   G + +IE    ++D+  + G L+ AH +   +P +  ++I W A
Sbjct: 441 DLQQARNMHGYLIRS-GFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSA 499

Query: 551 LLAASKLH 558
           ++A   +H
Sbjct: 500 IIAGYGMH 507


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  423 bits (1087), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 210/531 (39%), Positives = 327/531 (61%), Gaps = 2/531 (0%)

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           GL  D Y+ N +++   +       R+LF ++   ++  W+TMIRG       ++A+E  
Sbjct: 41  GLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFY 100

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
             MR     P+      ++   A + D+ LG  IH  VV+   D    V + T+L+ +Y+
Sbjct: 101 GLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFD--CDVFVKTSLVCLYA 158

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           KCG L  A ++F+ +   +VVSWT +ISGYI   +  E + +F  ++E N+ P   TI+ 
Sbjct: 159 KCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVR 218

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           ++  C  +G L  G+W+H  I+  G   ++ +  +LVDMY KC  +  AR++FDGM  KD
Sbjct: 219 VLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKD 278

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           ++ W A+I  YA      +A +LF+ M+   V+P+  T+VG+LS C   GALE+G+W+  
Sbjct: 279 IVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSG 338

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
            +++     + +L TAL+D+YAKCG ++ A+ +F     +D  +WNA+++G  M+G  + 
Sbjct: 339 LVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKI 398

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           +   F  +E+ G+KP+G TFIGLL  C+HAGLV EG+  F+ M     L P IEHYGCMV
Sbjct: 399 SFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMV 458

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYG 580
           DLLGRAGLLDEAH++I++MP+  N IVWGALL A ++H++  + E+A  Q++E+EP N G
Sbjct: 459 DLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSG 518

Query: 581 YNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             VL+SNIY+   +W++ A VR  M E R++K PG S +EV+G+VH+F+ G
Sbjct: 519 NYVLLSNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVG 569



 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 145/461 (31%), Positives = 251/461 (54%), Gaps = 28/461 (6%)

Query: 16  CHAH-----IIKTHFKFSYTN--------IINP-LTRYNSLVTSYIKNNKPSSALNIYAF 61
           CH +     I++  F FS TN        I  P +  +N+++   + N+    A+  Y  
Sbjct: 43  CHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGL 102

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           MR  G   +NFT P +LKACA++L   LG +IH   +K G D D +V  +L+ +Y++CG 
Sbjct: 103 MRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGY 162

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           L  A  +FD++P+++VVSW+ +I GY   G   EA+++ R +  M++ P    ++ ++S 
Sbjct: 163 LEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSA 222

Query: 182 FADVADVDLGKAIHACV-----VRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLN 236
              + D++ G+ IH C+     VRN       V + T+L+DMY+KCGN+  A+ +F+ + 
Sbjct: 223 CTQLGDLNSGEWIHKCIMEMGMVRN-------VFVGTSLVDMYAKCGNMEKARSVFDGMP 275

Query: 237 QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
           +  +VSW  MI GY       E + LF +M  ENV P   T++ ++  C  +G L+LG+W
Sbjct: 276 EKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEW 335

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           +   + RN F ++  +  AL+D+Y KC  +  A  +F GMK KD ++WNA+IS  A    
Sbjct: 336 VSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGY 395

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKT 415
           +  +F LF  ++   ++P+  T +GLL  CT AG ++ G ++ ++      L   +    
Sbjct: 396 VKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYG 455

Query: 416 ALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
            +VD+  + G ++ A++L     +  +  +W A++    +H
Sbjct: 456 CMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIH 496


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/591 (35%), Positives = 353/591 (59%), Gaps = 2/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y+K    SSA+ ++  MR +G E +  T+   L   A       G ++H  A+
Sbjct: 215 WNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAV 274

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+ +  V+N L+ MY++C  L     LF  MP  D+V+W+ MI G  + G  ++AL 
Sbjct: 275 KYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALL 334

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+   IRP  V ++S++    D+   + GK +H  +VRNC    + V + +AL+D+
Sbjct: 335 LFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCV--HMDVFLVSALVDI 392

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC  +  A+ +++      VV  + MISGY+      E V++F  ++E+ + P+ + I
Sbjct: 393 YFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAI 452

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  ++LG+ LH+Y L+N +E    + +AL+DMY KC  +  +  +F  + +
Sbjct: 453 ASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISA 512

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN++IS++AQ    ++A  LF  M +  V+ + VT+  +LS C    A+  GK +
Sbjct: 513 KDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEI 572

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + K  +  D+  ++AL+DMY KCG++  A+R+F     ++   WN+++A YG +G  
Sbjct: 573 HGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLV 632

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +E++     M+  G K + +TF+ L++AC+HAG V EG  +F  M     + P++EH+ C
Sbjct: 633 KESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFAC 692

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDL  RAG LD+A E+I  MP +P+  +WGALL A ++H+N  + EIA+ ++ +++P N
Sbjct: 693 MVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHN 752

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            GY VLMSNI AVA RW+ V+ VRR+MK+ +V+K PG+S V+VN   H F+
Sbjct: 753 SGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFV 803



 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 171/553 (30%), Positives = 299/553 (54%), Gaps = 15/553 (2%)

Query: 12  QTRQCHAHIIKTHFKFSYTNIINPLTR--------YNSLVTSYIKNNKPSSALNIYAFMR 63
           QTR    +++   F+     + + L R        +N L+          SAL  Y  M 
Sbjct: 78  QTRLVGMYVLARRFR-DAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMW 136

Query: 64  KNGSEV--DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
            + S    D+ T P ++K+CA +    LG+ +H  A   GLDGD +V +ALI+MY+  G 
Sbjct: 137 AHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGL 196

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           L  AR +FD M  RD V W+ M+ GY + G    A+E+  +MR     P+   +   +S+
Sbjct: 197 LWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSV 256

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
            A  +D+  G  +H   V+   + +  VA+A  L+ MY+KC  L    +LF  + ++ +V
Sbjct: 257 SATESDLFFGVQLHTLAVKYGLESE--VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLV 314

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           +W  MISG ++   +++ + LF +M +  + P  +T++SL+     + G   GK LH YI
Sbjct: 315 TWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYI 374

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
           +RN     + + +ALVD+Y KCR +R A++++D  K+ DV+I + +IS Y       +A 
Sbjct: 375 VRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAV 434

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
           ++F ++    +RPN V +  +L  C    A+++G+ LH+Y  K   E    +++AL+DMY
Sbjct: 435 KMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMY 494

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
           AKCG ++ ++ +FS+   +D   WN+M++ +  +G  EEAL  F +M   GVK + +T  
Sbjct: 495 AKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTIS 554

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
            +L+AC+    +  GK +   ++ G  +   +     ++D+ G+ G L+ AH + +SMP 
Sbjct: 555 SVLSACASLPAIYYGKEIHGVVIKG-PIRADLFAESALIDMYGKCGNLEWAHRVFESMPE 613

Query: 542 RPNMIVWGALLAA 554
           + N + W +++A+
Sbjct: 614 K-NEVSWNSIIAS 625



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 241/446 (54%), Gaps = 9/446 (2%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           + L  +N +++  ++N     AL ++  M+K+G   D+ T+ ++L A   +   + GKE+
Sbjct: 311 DDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKEL 370

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG+ ++N +  D ++ +AL+ +Y +C ++  A+ ++D     DVV  STMI GY   G+ 
Sbjct: 371 HGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMS 430

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           +EA+++ R +    IRP+ VA+ S++   A +A + LG+ +H+  ++N  + +    + +
Sbjct: 431 QEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGR--CYVES 488

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMY+KCG L  +  +F++++    V+W  MIS + +  E  E + LF EM  E V  
Sbjct: 489 ALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKY 548

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           S +TI S++  C  +  +  GK +H  +++      L   +AL+DMYGKC  +  A  +F
Sbjct: 549 SNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVF 608

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + M  K+ + WN++I++Y     + ++  L  HM+    + + VT + L+S C  AG ++
Sbjct: 609 ESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQ 668

Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAG 451
            G +      E+  +   +     +VD+Y++ G ++ A  L  +  ++ D  +W A++  
Sbjct: 669 EGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHA 728

Query: 452 YGMHGCGEEALI-----FFVDMERSG 472
             +H   E A I     F +D   SG
Sbjct: 729 CRVHRNVELAEIASQELFKLDPHNSG 754



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 230/498 (46%), Gaps = 22/498 (4%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDG-DAYVSNALIQMYSECGSLVSARYLFDEMPN 134
            +L+ C       LG ++HG A+  GL   D  +   L+ MY        A  +F  +P 
Sbjct: 44  AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPR 103

Query: 135 RDV---VSWSTMIRGYHRGGLPEEALEVMREM--RFMDIRPSEVAMISMVSLFADVADVD 189
                 + W+ +IRG    G    AL    +M        P       +V   A +  + 
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIA 163

Query: 190 LGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           LG+ +H    R  +   L   + + +ALI MY+  G L  A+Q+F+ + +   V W VM+
Sbjct: 164 LGRLVH----RTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMM 219

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
            GY++   ++  V LF +M      P+  T+   +        L  G  LH   ++ G E
Sbjct: 220 DGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLE 279

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             +A+AN LV MY KC+ +     LF  M   D++ WN +IS   Q   +D+A  LF  M
Sbjct: 280 SEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDM 339

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           + S +RP+ VT+V LL   T+      GK LH YI +  + +DV L +ALVD+Y KC  V
Sbjct: 340 QKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAV 399

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             A  ++  +   D+ + + M++GY ++G  +EA+  F  +   G++PN +    +L AC
Sbjct: 400 RMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           +    +  G+      +H   L    E        ++D+  + G LD +H +   +  + 
Sbjct: 460 ASMAAMKLGQE-----LHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAK- 513

Query: 544 NMIVWGALLAASKLHKNP 561
           + + W +++++   +  P
Sbjct: 514 DEVTWNSMISSFAQNGEP 531


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 210/549 (38%), Positives = 341/549 (62%), Gaps = 4/549 (0%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSEC--GSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           EIH   IK  L     V+  L++  +     S+  A  +F ++   D  +++ MIRG+  
Sbjct: 42  EIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTL 101

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
              P EA+ + +EM    ++P E     ++ + + +  +  G+ IHA +++ C     G 
Sbjct: 102 KQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMK-CGFGSHGF 160

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            +   LI MY+ CG +  A+++F+ +++ +V +W  M +GY +     E V+LF EM+E 
Sbjct: 161 -VKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLEL 219

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
           ++   E+T++S++  CG +  L+LG+W++ Y+   G + +  +  +LVDMY KC ++ +A
Sbjct: 220 DIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTA 279

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           R LFD M  +DV+ W+A+IS Y+QA    +A +LF  M+ + + PNE+TMV +LS C   
Sbjct: 280 RRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVL 339

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           GALE GKW+H +I+K+ +++ V L TAL+D YAKCG V  +  +F +   +++  W  ++
Sbjct: 340 GALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLI 399

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
            G   +G G++AL +F  M    V+PN +TFIG+L+ACSHAGLV EG+ +F  M    G+
Sbjct: 400 QGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGI 459

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            P+IEHYGCMVD+LGRAGL++EA + IK+MP++PN ++W  LLA+ K+HKN  +GE +  
Sbjct: 460 EPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLK 519

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           Q++ +EP + G  +L+SNIYA   RW D   VR  MKE  +KK PG S +E++G++H+F 
Sbjct: 520 QLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCSLIELDGVIHEFF 579

Query: 630 RGGMVNWKS 638
               V+ +S
Sbjct: 580 AEDNVHSQS 588



 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 143/436 (32%), Positives = 245/436 (56%), Gaps = 7/436 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN ++  +     P  A+ ++  M +N  + D FT P ILK C+++     G++IH   +
Sbjct: 92  YNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIM 151

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G     +V N LI MY+ CG +  AR +FDEM  R+V +W++M  GY + G  EE ++
Sbjct: 152 KCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVK 211

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  EM  +DIR  EV ++S+++    +AD++LG+ I+  V    K  K    + T+L+DM
Sbjct: 212 LFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEE--KGLKGNPTLITSLVDM 269

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG +  A++LF+++++  VV+W+ MISGY + +   E + LF EM + N+ P+EIT+
Sbjct: 270 YAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITM 329

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +S++  C  +G L+ GKW+H +I +   + ++ +  AL+D Y KC  + S+  +F  M  
Sbjct: 330 VSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPV 389

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K+V+ W  +I   A      KA E F  M    V PN+VT +G+LS C+ AG ++ G+ L
Sbjct: 390 KNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDL 449

Query: 399 HTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
              + +  G+E  +     +VD+  + G +  A++      I  +  +W  ++A   +H 
Sbjct: 450 FVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHK 509

Query: 457 ---CGEEALIFFVDME 469
               GEE+L   + +E
Sbjct: 510 NVEIGEESLKQLIILE 525


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 226/592 (38%), Positives = 339/592 (57%), Gaps = 4/592 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y +      A  ++  M     E    T   +L AC+      LGKE H   I
Sbjct: 130 WNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVI 189

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   D  +  AL+ MY + GS+  AR +FD +  RDV +++ MI GY + G  E+A +
Sbjct: 190 KVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQ 249

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIATALID 217
           +   M+    +P+ ++ +S++   +    +  GKA+HA C+     D+   V +ATALI 
Sbjct: 250 LFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDD---VRVATALIR 306

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY  CG++  A+++F+++    VVSWTVMI GY   + I +   LFA M EE + P  IT
Sbjct: 307 MYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRIT 366

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
            + +I  C     L L + +H+ ++R GF   L +  ALV MY KC  I+ AR +FD M 
Sbjct: 367 YIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMS 426

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +DV+ W+A+I AY +  C ++AFE F  MK + V P+ VT + LL+ C   GAL++G  
Sbjct: 427 RRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGME 486

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           ++T   K  L   + +  AL++M  K G +  A  +F   + RD+  WN M+ GY +HG 
Sbjct: 487 IYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGN 546

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
             EAL  F  M +   +PN +TF+G+L+ACS AG V EG+  F  ++ G G+VP +E YG
Sbjct: 547 AREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYG 606

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLLGRAG LDEA  +I  MPL+PN  +W  LLAA +++ N  + E AA + L  EP 
Sbjct: 607 CMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSEPY 666

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +    V +S++YA A  W +VA VR+VM+   V+KE G + +EV G +H F+
Sbjct: 667 DGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGCTWIEVEGKLHTFV 718



 Score =  285 bits (728), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 156/499 (31%), Positives = 275/499 (55%), Gaps = 8/499 (1%)

Query: 64  KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLV 123
           +  + +D+ T   + + C  +    LGK++    I++G   + Y  N LI+++S CG+++
Sbjct: 54  EGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNML 113

Query: 124 SARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFA 183
            AR  FD + N+ VV+W+ +I GY + G  +EA  + R+M    + PS +  + ++   +
Sbjct: 114 EARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACS 173

Query: 184 DVADVDLGKAIHACVVR--NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
             A + LGK  HA V++     D ++G    TAL+ MY K G++  A+Q+F+ L +  V 
Sbjct: 174 SPAGLKLGKEFHAQVIKVGFVSDFRIG----TALVSMYVKGGSMDGARQVFDGLYKRDVS 229

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           ++ VMI GY +  +  +  +LF  M +E   P+ I+ LS++  C     L  GK +HA  
Sbjct: 230 TFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQC 289

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
           +  G    + +A AL+ MY  C  I  AR +FD MK +DV+ W  +I  YA+   I+ AF
Sbjct: 290 MNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAF 349

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
            LF  M+   ++P+ +T + +++ C  +  L + + +H+ + + G   D+++ TALV MY
Sbjct: 350 GLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMY 409

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
           AKCG +  A ++F     RD+  W+AM+  Y  +GCGEEA   F  M+R+ V+P+ +T+I
Sbjct: 410 AKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYI 469

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
            LLNAC H G +  G  ++ + +    LV  I     ++++  + G ++ A  + ++M  
Sbjct: 470 NLLNACGHLGALDLGMEIYTQAIKA-DLVSHIPVGNALINMNVKHGSIERARYIFENMVQ 528

Query: 542 RPNMIVWGALLAASKLHKN 560
           R +++ W  ++    LH N
Sbjct: 529 R-DVVTWNVMIGGYSLHGN 546



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/423 (31%), Positives = 226/423 (53%), Gaps = 4/423 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           ++ +N ++  Y K+     A  ++  M++ G + +  +  +IL  C+       GK +H 
Sbjct: 228 VSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHA 287

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +  GL  D  V+ ALI+MY  CGS+  AR +FD+M  RDVVSW+ MIRGY      E+
Sbjct: 288 QCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIED 347

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A  +   M+   I+P  +  I +++  A  AD+ L + IH+ VVR      L   + TAL
Sbjct: 348 AFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDL--LVDTAL 405

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           + MY+KCG +  A+Q+F+ +++  VVSW+ MI  Y+      E    F  M   NV P  
Sbjct: 406 VHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDV 465

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T ++L+  CG +G L LG  ++   ++      + + NAL++M  K   I  AR +F+ 
Sbjct: 466 VTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFEN 525

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M  +DV+ WN +I  Y+      +A +LF  M   + RPN VT VG+LS C+ AG +E G
Sbjct: 526 MVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEG 585

Query: 396 KWLHTY-IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYG 453
           +   +Y ++ +G+   + L   +VD+  + G+++ A  L +   +  +  +W+ ++A   
Sbjct: 586 RRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACR 645

Query: 454 MHG 456
           ++G
Sbjct: 646 IYG 648



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 164/320 (51%), Gaps = 4/320 (1%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +  ++  Y +N+    A  ++A M++ G + D  T   I+ ACA      L +E
Sbjct: 326 VRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLARE 385

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IH   ++ G   D  V  AL+ MY++CG++  AR +FD M  RDVVSWS MI  Y   G 
Sbjct: 386 IHSQVVRAGFGTDLLVDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGC 445

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            EEA E    M+  ++ P  V  I++++    +  +DLG  I+   ++   D    + + 
Sbjct: 446 GEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIK--ADLVSHIPVG 503

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            ALI+M  K G++  A+ +F  + Q  VV+W VMI GY       E + LF  M++E   
Sbjct: 504 NALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFR 563

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILR-NGFEFSLAMANALVDMYGKCREIRSART 331
           P+ +T + ++  C   G ++ G+   +Y+L   G   ++ +   +VD+ G+  E+  A  
Sbjct: 564 PNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAEL 623

Query: 332 LFDGMKSK-DVMIWNAVISA 350
           L + M  K +  IW+ +++A
Sbjct: 624 LINRMPLKPNSSIWSTLLAA 643



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 180/360 (50%), Gaps = 9/360 (2%)

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T + L   C  +    LGK +  +I+++G + ++   N L+ ++  C  +  AR  FD +
Sbjct: 63  TYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTFDSV 122

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           ++K V+ WNA+I+ YAQ   + +AF LF  M    + P+ +T + +L  C+    L++GK
Sbjct: 123 ENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGK 182

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
             H  + K G   D  + TALV MY K G ++GA ++F     RD+  +N M+ GY   G
Sbjct: 183 EFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYAKSG 242

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
            GE+A   F  M++ G KPN I+F+ +L+ CS    +  GK+V  + ++  GLV  +   
Sbjct: 243 DGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMN-TGLVDDVRVA 301

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN--PSMGEIAATQILEI 574
             ++ +    G ++ A  +   M +R +++ W  ++     + N   + G  A  Q   I
Sbjct: 302 TALIRMYMGCGSIEGARRVFDKMKVR-DVVSWTVMIRGYAENSNIEDAFGLFATMQEEGI 360

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMV 634
           +P    Y  +++   + A    D++  R +  ++ V+   G   +    LVH + + G +
Sbjct: 361 QPDRITYIHIINACASSA----DLSLAREIHSQV-VRAGFGTDLLVDTALVHMYAKCGAI 415


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 224/570 (39%), Positives = 341/570 (59%), Gaps = 16/570 (2%)

Query: 75  PTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYS--ECGSLVSARYLFDEM 132
           P +L       M+ L K+IH   ++  L  D + ++ ++   +  + GSL  AR +F+++
Sbjct: 42  PCLLSLEKCTTMSQL-KQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQI 100

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           PN    + +++IRGY    LP +A+   + M    + P      +  SLF     +  GK
Sbjct: 101 PNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDR---FTFPSLFKSCGVLCEGK 157

Query: 193 AIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
            +H      C   KLG A    I   L++MYS CG L  A+++F+++   SVVSW  MI 
Sbjct: 158 QLH------CHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIG 211

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
            Y + +  +E ++LF  M   +V P+EIT+++++  C     L+  K +H YI   G  F
Sbjct: 212 AYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGF 271

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
              + +AL+D+Y KC     AR LF+ M  K++  WN +I+ + +    ++A  LF  M+
Sbjct: 272 HTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQ 331

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
           +S V+ ++VTM  LL  CT  GALE+GKWLH YIEK+ +EVDV L TALVDMYAKCG + 
Sbjct: 332 LSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIE 391

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A R+F E   +D+  W A++ G  M G G +AL  F +M+ S VKP+ ITF+G+L ACS
Sbjct: 392 SAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACS 451

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           HAGLV EG + F+ M +  G+ P IEHYGCMVD+LGRAG + EA ++I++MP+ P+  V 
Sbjct: 452 HAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVL 511

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
             LL+A ++H N  + E AA Q++E++P+N G  VL+SNIY+    W     +R +M E 
Sbjct: 512 VGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVER 571

Query: 609 RVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
            +KK PG S++EV G+VH+F++G + + +S
Sbjct: 572 NIKKPPGCSAIEVGGVVHEFVKGDVSHPQS 601



 Score =  284 bits (727), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 159/469 (33%), Positives = 255/469 (54%), Gaps = 21/469 (4%)

Query: 26  KFSYTNIINPLT-RYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV 84
           +  +  I NP T   NS++  Y   N P  A+  Y  M   G + D FT P++ K+C  +
Sbjct: 94  RLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVL 153

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
                GK++H  + K G   DAY+ N L+ MYS CG LVSAR +FD+M N+ VVSW+TMI
Sbjct: 154 CE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMI 210

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
             Y +  LP EA+++ R M    ++P+E+ ++++++  A   D++  K +H  +     D
Sbjct: 211 GAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYI-----D 265

Query: 205 EK---LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVR 261
           E        + +AL+D+Y KCG    A+ LFN++ + ++  W +MI+G++  ++  E + 
Sbjct: 266 ETGIGFHTVLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALS 325

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           LF EM    V   ++T+ SL+I C  +G L+LGKWLH YI +   E  +A+  ALVDMY 
Sbjct: 326 LFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYA 385

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           KC  I SA  +F  M  KDVM W A+I   A      KA ELF  M++S+V+P+ +T VG
Sbjct: 386 KCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVG 445

Query: 382 LLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIY 439
           +L+ C+ AG +  G  + ++   K G++  +     +VDM  + G +  A  L     + 
Sbjct: 446 VLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMA 505

Query: 440 RDICMWNAMMAGYGMHG---CGEEALIFFVDMERSGVKPNGITFIGLLN 485
            D  +   +++   +HG     E A    ++++      NG T++ L N
Sbjct: 506 PDYFVLVGLLSACRIHGNLVVAERAAQQLIELDPK----NGGTYVLLSN 550


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/591 (35%), Positives = 353/591 (59%), Gaps = 2/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y+K    SSA+ ++  MR +G E +  T+   L   A       G ++H  A+
Sbjct: 215 WNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAV 274

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+ +  V+N L+ MY++C  L     LF  MP  D+V+W+ MI G  + G  ++AL 
Sbjct: 275 KYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALL 334

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+   IRP  V ++S++    D+   + GK +H  +VRNC    + V + +AL+D+
Sbjct: 335 LFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCV--HMDVFLVSALVDI 392

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC  +  A+ +++      VV  + MISGY+      E V++F  ++E+ + P+ + I
Sbjct: 393 YFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAI 452

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  ++LG+ LH+Y L+N +E    + +AL+DMY KC  +  +  +F  + +
Sbjct: 453 ASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISA 512

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN++IS++AQ    ++A  LF  M +  V+ + VT+  +LS C    A+  GK +
Sbjct: 513 KDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEI 572

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + K  +  D+  ++AL+DMY KCG++  A+R+F     ++   WN+++A YG +G  
Sbjct: 573 HGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLV 632

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +E++     M+  G K + +TF+ L++AC+HAG V EG  +F  M     + P++EH+ C
Sbjct: 633 KESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFAC 692

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDL  RAG LD+A E+I  MP +P+  +WGALL A ++H+N  + EIA+ ++ +++P N
Sbjct: 693 MVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHN 752

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            GY VLMSNI AVA RW+ V+ VRR+MK+ +V+K PG+S V+VN   H F+
Sbjct: 753 SGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVNNTSHLFV 803



 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 171/553 (30%), Positives = 299/553 (54%), Gaps = 15/553 (2%)

Query: 12  QTRQCHAHIIKTHFKFSYTNIINPLTR--------YNSLVTSYIKNNKPSSALNIYAFMR 63
           QTR    +++   F+     + + L R        +N L+          SAL  Y  M 
Sbjct: 78  QTRLVGMYVLARRFR-DAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMW 136

Query: 64  KNGSEV--DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
            + S    D+ T P ++K+CA +    LG+ +H  A   GLDGD +V +ALI+MY+  G 
Sbjct: 137 AHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGL 196

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           L  AR +FD M  RD V W+ M+ GY + G    A+E+  +MR     P+   +   +S+
Sbjct: 197 LWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSV 256

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
            A  +D+  G  +H   V+   + +  VA+A  L+ MY+KC  L    +LF  + ++ +V
Sbjct: 257 SATESDLFFGVQLHTLAVKYGLESE--VAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLV 314

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           +W  MISG ++   +++ + LF +M +  + P  +T++SL+     + G   GK LH YI
Sbjct: 315 TWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYI 374

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
           +RN     + + +ALVD+Y KCR +R A++++D  K+ DV+I + +IS Y       +A 
Sbjct: 375 VRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAV 434

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
           ++F ++    +RPN V +  +L  C    A+++G+ LH+Y  K   E    +++AL+DMY
Sbjct: 435 KMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMY 494

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
           AKCG ++ ++ +FS+   +D   WN+M++ +  +G  EEAL  F +M   GVK + +T  
Sbjct: 495 AKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTIS 554

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
            +L+AC+    +  GK +   ++ G  +   +     ++D+ G+ G L+ AH + +SMP 
Sbjct: 555 SVLSACASLPAIYYGKEIHGVVIKG-PIRADLFAESALIDMYGKCGNLEWAHRVFESMPE 613

Query: 542 RPNMIVWGALLAA 554
           + N + W +++A+
Sbjct: 614 K-NEVSWNSIIAS 625



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 241/446 (54%), Gaps = 9/446 (2%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           + L  +N +++  ++N     AL ++  M+K+G   D+ T+ ++L A   +   + GKE+
Sbjct: 311 DDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKEL 370

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG+ ++N +  D ++ +AL+ +Y +C ++  A+ ++D     DVV  STMI GY   G+ 
Sbjct: 371 HGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMS 430

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           +EA+++ R +    IRP+ VA+ S++   A +A + LG+ +H+  ++N  + +    + +
Sbjct: 431 QEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGR--CYVES 488

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMY+KCG L  +  +F++++    V+W  MIS + +  E  E + LF EM  E V  
Sbjct: 489 ALMDMYAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKY 548

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           S +TI S++  C  +  +  GK +H  +++      L   +AL+DMYGKC  +  A  +F
Sbjct: 549 SNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVF 608

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + M  K+ + WN++I++Y     + ++  L  HM+    + + VT + L+S C  AG ++
Sbjct: 609 ESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQ 668

Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAG 451
            G +      E+  +   +     +VD+Y++ G ++ A  L  +  ++ D  +W A++  
Sbjct: 669 EGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHA 728

Query: 452 YGMHGCGEEALI-----FFVDMERSG 472
             +H   E A I     F +D   SG
Sbjct: 729 CRVHRNVELAEIASQELFKLDPHNSG 754



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 230/498 (46%), Gaps = 22/498 (4%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDG-DAYVSNALIQMYSECGSLVSARYLFDEMPN 134
            +L+ C       LG ++HG A+  GL   D  +   L+ MY        A  +F  +P 
Sbjct: 44  AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPR 103

Query: 135 RDV---VSWSTMIRGYHRGGLPEEALEVMREM--RFMDIRPSEVAMISMVSLFADVADVD 189
                 + W+ +IRG    G    AL    +M        P       +V   A +  + 
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIA 163

Query: 190 LGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           LG+ +H    R  +   L   + + +ALI MY+  G L  A+Q+F+ + +   V W VM+
Sbjct: 164 LGRLVH----RTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMM 219

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
            GY++   ++  V LF +M      P+  T+   +        L  G  LH   ++ G E
Sbjct: 220 DGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLE 279

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             +A+AN LV MY KC+ +     LF  M   D++ WN +IS   Q   +D+A  LF  M
Sbjct: 280 SEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDM 339

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           + S +RP+ VT+V LL   T+      GK LH YI +  + +DV L +ALVD+Y KC  V
Sbjct: 340 QKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAV 399

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             A  ++  +   D+ + + M++GY ++G  +EA+  F  +   G++PN +    +L AC
Sbjct: 400 RMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           +    +  G+      +H   L    E        ++D+  + G LD +H +   +  + 
Sbjct: 460 ASMAAMKLGQE-----LHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAK- 513

Query: 544 NMIVWGALLAASKLHKNP 561
           + + W +++++   +  P
Sbjct: 514 DEVTWNSMISSFAQNGEP 531


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/591 (35%), Positives = 333/591 (56%), Gaps = 2/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+  Y +    +  L ++  M +   + + FT+ T+LK CA       G+ IH   I
Sbjct: 282 WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII 341

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G +G+ ++   L+ MYS+CG  + A  +F  +   D+V WS +I    + G  EE+++
Sbjct: 342 KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIK 401

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   MR  D  P++  + S++S   +  ++  G++IHACV +     +  VA++ AL+ M
Sbjct: 402 LFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWK--YGFETDVAVSNALVTM 459

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y K G +    +L+  +    ++SW   +SG   C   +  + +F  M+EE   P+  T 
Sbjct: 460 YMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTF 519

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +S++  C  +  +  G+ +HA+I++N  + +  +  AL+DMY KC  +  A   F+ +  
Sbjct: 520 ISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSV 579

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +D+  W  +I+ YAQ +  +KA   F  M+   V+PNE T+ G LS C+   +LE G+ L
Sbjct: 580 RDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQL 639

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H+ + K G   D+ + +ALVDMYAKCG +  A  LF   I RD   WN ++ GY  +G G
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            +AL  F  M   G+ P+G+TF G+L+ACSH GLV EGK  F+ M    G+ P ++H  C
Sbjct: 700 NKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCAC 759

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVD+LGR G  DE  + I+ M L  N ++W  +L ASK+H N  +GE AA ++ E++P+ 
Sbjct: 760 MVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEE 819

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
               +L+SNI+A   RW+DV  VR +M    VKKEPG S VE NG VH F+
Sbjct: 820 ESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFV 870



 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 150/516 (29%), Positives = 267/516 (51%), Gaps = 4/516 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+   +     + ++ ++  M+  G   + FT+ T LKAC+  +   LGK++H  A 
Sbjct: 181 WTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAF 240

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL  D +V +AL+ +Y++CG +  A  +F  MP ++ V+W+ ++ GY + G     L+
Sbjct: 241 KLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLK 300

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M  +D++ +E  + +++   A+  ++  G+ IH+ +++ C  E     I   L+DM
Sbjct: 301 LFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIK-CGYEG-NEFIGCGLVDM 358

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSKCG    A  +F  + +  +V W+ +I+   +  +  E ++LF  M   +  P++ TI
Sbjct: 359 YSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTI 418

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            SL+      G LQ G+ +HA + + GFE  +A++NALV MY K   +     L++ M  
Sbjct: 419 CSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVD 478

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +D++ WNA +S        D+   +F HM      PN  T + +L  C+    +  G+ +
Sbjct: 479 RDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQV 538

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H +I K  L+ +  + TAL+DMYAKC  +  A   F+    RD+  W  ++  Y     G
Sbjct: 539 HAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQG 598

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           E+AL +F  M++ GVKPN  T  G L+ CS    + EG      MV   G V  +     
Sbjct: 599 EKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASL-EGGQQLHSMVFKSGHVSDMFVGSA 657

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +VD+  + G ++EA  + +++ +R + I W  ++  
Sbjct: 658 LVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICG 692



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 262/486 (53%), Gaps = 20/486 (4%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           ++L+ CA      + K IHG  +K+ ++ D+++  +L+ +Y++C     AR +  +MP+R
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR 176

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
           DVVSW+ +I+G    G   +++ + +EM+   I P+E  + + +   +    +DLGK +H
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236

Query: 196 ACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           A      +  KLG+     + +AL+D+Y+KCG +  A ++F  + + + V+W V+++GY 
Sbjct: 237 A------QAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYA 290

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +  ++   ++LF  M+E +V  +E T+ +++  C     L+ G+ +H+ I++ G+E +  
Sbjct: 291 QRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEF 350

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           +   LVDMY KC     A  +F  +K  D+++W+A+I+   Q    +++ +LF  M++  
Sbjct: 351 IGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGD 410

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
             PN+ T+  LLS  T  G L+ G+ +H  + K G E DV +  ALV MY K G V+   
Sbjct: 411 TLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGT 470

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCG--EEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           +L+   + RD+  WNA ++  G+H CG  +  L  F  M   G  PN  TFI +L +CS 
Sbjct: 471 KLYESMVDRDLISWNAYLS--GLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSC 528

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGC--MVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
              V  G+ V     H +       ++ C  ++D+  +   L++A      + +R ++  
Sbjct: 529 LFDVHYGRQVH---AHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVR-DLFT 584

Query: 548 WGALLA 553
           W  ++ 
Sbjct: 585 WTVIIT 590



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 120/263 (45%), Gaps = 35/263 (13%)

Query: 14  RQCHAHIIKTHF---KFSYTNIIN---------------------PLTRYNSLVTSYIKN 49
           RQ HAHIIK       F  T +I+                      L  +  ++T+Y + 
Sbjct: 536 RQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQT 595

Query: 50  NKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVS 109
           N+   ALN +  M++ G + + FT+   L  C+ +     G+++H    K+G   D +V 
Sbjct: 596 NQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVG 655

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
           +AL+ MY++CG +  A  LF+ +  RD ++W+T+I GY + G   +AL   R M    I 
Sbjct: 656 SALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGIS 715

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA----TALIDMYSKCGNL 225
           P  V    ++S  +    V+ GK     + R+      G++        ++D+  + G  
Sbjct: 716 PDGVTFTGILSACSHQGLVEEGKEHFNSMYRD-----FGISPTVDHCACMVDILGRVGKF 770

Query: 226 AYAKQLFNR--LNQNSVVSWTVM 246
              +    +  L+QN+++  TV+
Sbjct: 771 DELEDFIQKMQLSQNALIWETVL 793


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 224/555 (40%), Positives = 333/555 (60%), Gaps = 16/555 (2%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYS--ECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           K+IH   ++ GL  D + ++ ++   S  E GSL  AR +F ++PN    + +++IRG  
Sbjct: 5   KQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIRGCT 64

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
              L +EAL   +EM    + P      +  SLF    +   GK IH      C   KLG
Sbjct: 65  DKNLHQEALLFYQEMMVQGLIPDRY---TFPSLFKSCRNSSEGKQIH------CHSTKLG 115

Query: 209 VAIAT----ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
            A  T     L++MYS CG L  A+++F+++   +VVSW  MI  + + ++ NE VRLF 
Sbjct: 116 FASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFD 175

Query: 265 EMIE-ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
            M++ ENV P+E+T+++++  C     L + K +H YI  +GF   + +   L+D+Y KC
Sbjct: 176 RMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKC 235

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
             ++ AR LFD  + K++  WN +I+ + +    ++A  LF  M+   ++ ++VTM  LL
Sbjct: 236 GCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLL 295

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
             CT  GALE+GKWLH YI+KQ ++VDV L TALVDMYAKCG +  A ++F E   +D+ 
Sbjct: 296 LACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVM 355

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            W A++ G  M G  E AL +F +M   GVKP+ ITF+G+L ACSHAG V EG S F+ M
Sbjct: 356 TWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSM 415

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
               G+ P IEHYG +VD+LGRAG + EA E+IKSMP+ P+  V G LL A ++H N   
Sbjct: 416 SDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEA 475

Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
            E AA Q+LEI+P + G  VL+SNIY  + +W +    R +M E  ++K PG S +EV+G
Sbjct: 476 AERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVHG 535

Query: 624 LVHKFIRGGMVNWKS 638
           +VH+F++G   + +S
Sbjct: 536 VVHEFVKGDSSHRQS 550



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 145/443 (32%), Positives = 239/443 (53%), Gaps = 15/443 (3%)

Query: 26  KFSYTNIINPLTRY--NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQ 83
           +  ++ I NP T Y  NS++      N    AL  Y  M   G   D +T P++ K+C  
Sbjct: 42  RLVFSQIPNP-TSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRN 100

Query: 84  VLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTM 143
              +  GK+IH  + K G   D Y  N L+ MYS CG LVSAR +FD+M ++ VVSW+TM
Sbjct: 101 ---SSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATM 157

Query: 144 IRGYHRGGLPEEALEVM-REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           I  + +   P EA+ +  R M+  +++P+EV ++++++  A   D+ + K IH  +    
Sbjct: 158 IGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYI---- 213

Query: 203 KDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
            +   G  V + T L+D+Y KCG +  A+ LF++  + ++ SW +MI+G++  +   E +
Sbjct: 214 DEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEAL 273

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
            LF EM  + +   ++T+ SL++ C  +G L+LGKWLHAYI +   +  +A+  ALVDMY
Sbjct: 274 LLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMY 333

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
            KC  I +A  +F  M  KDVM W A+I   A     + A + F  M +  V+P+ +T V
Sbjct: 334 AKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFV 393

Query: 381 GLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAI 438
           G+L+ C+ AG ++ G    ++  +  G++  +     LVD+  + G +  A  L  S  +
Sbjct: 394 GVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPM 453

Query: 439 YRDICMWNAMMAGYGMHGCGEEA 461
             D  +   ++    +HG  E A
Sbjct: 454 APDQFVLGGLLGACRIHGNLEAA 476



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 182/373 (48%), Gaps = 40/373 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           + +++  + + ++P+ A+ ++  M K+ + + +  T+  +L ACA+     + K IH + 
Sbjct: 154 WATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYI 213

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
            ++G      ++  L+ +Y +CG +  AR LFD+   +++ SW+ MI G+      EEAL
Sbjct: 214 DEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEAL 273

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            + REM+   I+  +V M S++     +  ++LGK +HA + +   D  + VA+ TAL+D
Sbjct: 274 LLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRID--VDVALGTALVD 331

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+KCG++  A Q+F+ + +  V++WT +I G   C +    ++ F EM  + V P  IT
Sbjct: 332 MYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAIT 391

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
            + ++  C   G +  G               ++  N++ D YG    I           
Sbjct: 392 FVGVLAACSHAGFVDEG---------------ISHFNSMSDTYGIQPTIEH--------- 427

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
                 +  ++    +A  I +A EL   M ++   P++  + GLL  C   G LE  + 
Sbjct: 428 ------YGGLVDILGRAGRIAEAEELIKSMPMA---PDQFVLGGLLGACRIHGNLEAAE- 477

Query: 398 LHTYIEKQGLEVD 410
                 KQ LE+D
Sbjct: 478 ---RAAKQLLEID 487


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 213/593 (35%), Positives = 352/593 (59%), Gaps = 3/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L++ Y K      +++++  M+K G   + +T   +LK  A +      K +HG+ +
Sbjct: 163 WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVL 222

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   +  V N+LI  Y + G + SA  LFDE+   DVVSW++MI G    G     LE
Sbjct: 223 KLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLE 282

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M  + +      ++S++   A++ ++ LG+A+H   V+ C  E+  V  +  L+DM
Sbjct: 283 IFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEE--VVFSNTLLDM 340

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSKCGNL  A ++F ++   ++VSWT +I+ Y+R    ++ + LF EM  + V P   T+
Sbjct: 341 YSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTV 400

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C     L  G+ +H+Y+++NG   +L + NAL++MY KC  +  AR +F  +  
Sbjct: 401 TSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV 460

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD++ WN +I  Y+Q    ++A ELF+ M+  + +P+++TM  +L  C    AL+ G+ +
Sbjct: 461 KDIVSWNTMIGGYSQNLLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREI 519

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H +I ++G   D+ +  ALVDMYAKCG +  A  LF     +D+  W  M+AGYGMHG G
Sbjct: 520 HGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFG 579

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EA+  F +M  +G++P+  +F  +LNACSH+GL+ EG   F+ M +  G+ PK+EHY C
Sbjct: 580 NEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYAC 639

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VDLL R G L +A++ I+SMP++P+  +WG LL+  ++H +  + E  A  I E+EP N
Sbjct: 640 VVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDN 699

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             Y V+++N+YA A +W +V  +R+ M++   K+ PG S +EV G  + F+ G
Sbjct: 700 TRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAG 752



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 162/594 (27%), Positives = 296/594 (49%), Gaps = 22/594 (3%)

Query: 2   KIKNGFLNLEQTRQ-CHAHIIKTHFKFSYTNIINPLTR-YNSLVTSYIKNNKPSSALNIY 59
           K  N F+  +Q R+ C  H        S+TN  + +T+  N+ +  + +     +A+ + 
Sbjct: 26  KSHNRFIFFKQPRRTCLLHST-VCVSPSFTNTTHSVTQNQNAKINKFCEMGDLRNAIEL- 83

Query: 60  AFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSEC 119
              +    E+   +  ++L+ CA+      GK +H   I NG+  D  +   L+ MY  C
Sbjct: 84  -LTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNC 142

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV 179
           G LV  R +FD++ N  V  W+ ++  Y + G   E++ + ++M+ + +  +      ++
Sbjct: 143 GDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVL 202

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRL 235
             FA +  V   K +H  V+      KLG     A+  +LI  Y K G +  A  LF+ L
Sbjct: 203 KCFAALGKVKECKRVHGYVL------KLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDEL 256

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
           ++  VVSW  MI+G +       G+ +F +M+   V     T++S+++ C  +G L LG+
Sbjct: 257 SEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGR 316

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
            LH + ++  F   +  +N L+DMY KC  +  A  +F  M    ++ W ++I+AY +  
Sbjct: 317 ALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREG 376

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
               A  LF  M+   VRP+  T+  ++  C  + +L+ G+ +H+Y+ K G+  ++ +  
Sbjct: 377 LYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTN 436

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           AL++MYAKCG V  A  +FS+   +DI  WN M+ GY  +    EAL  F+DM++   KP
Sbjct: 437 ALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKP 495

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC-MVDLLGRAGLLDEAHE 534
           + IT   +L AC+    + +G+ +   ++   G    + H  C +VD+  + GLL  A  
Sbjct: 496 DDITMACVLPACAGLAALDKGREIHGHILR-RGYFSDL-HVACALVDMYAKCGLLVLAQL 553

Query: 535 MIKSMPLRPNMIVWGALLAASKLH--KNPSMGEIAATQILEIEPQNYGYNVLMS 586
           +   +P + ++I W  ++A   +H   N ++      +I  IEP    ++ +++
Sbjct: 554 LFDMIP-KKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILN 606



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 200/377 (53%), Gaps = 10/377 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + S++ +Y++    S A+ ++  M+  G   D +T+ +I+ ACA       G+++H 
Sbjct: 362 IVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHS 421

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + IKNG+  +  V+NALI MY++CGS+  AR +F ++P +D+VSW+TMI GY +  LP E
Sbjct: 422 YVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNE 481

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           ALE+  +M+    +P ++ M  ++   A +A +D G+ IH  ++R      L V  A AL
Sbjct: 482 ALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHV--ACAL 538

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+KCG L  A+ LF+ + +  ++SWTVMI+GY      NE +  F EM    + P E
Sbjct: 539 VDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDE 598

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRN--GFEFSLAMANALVDMYGKCREIRSARTLF 333
            +  +++  C   G L  G W     +RN  G E  L     +VD+  +   +  A    
Sbjct: 599 SSFSAILNACSHSGLLNEG-WKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFI 657

Query: 334 DGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP-NEVTMVGLLSLCTEAGA 391
           + M  K D  IW  ++S     H +  A ++  H  + ++ P N    V L ++  EA  
Sbjct: 658 ESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEH--IFELEPDNTRYYVVLANVYAEAEK 715

Query: 392 LEMGKWLHTYIEKQGLE 408
            E  K L   ++K+G +
Sbjct: 716 WEEVKKLRKRMQKRGFK 732


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 213/593 (35%), Positives = 352/593 (59%), Gaps = 3/593 (0%)

Query: 39   YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
            +N L++ Y K      +++++  M+K G   + +T   +LK  A +      K +HG+ +
Sbjct: 438  WNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVL 497

Query: 99   KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            K G   +  V N+LI  Y + G + SA  LFDE+   DVVSW++MI G    G     LE
Sbjct: 498  KLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLE 557

Query: 159  VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
            +  +M  + +      ++S++  +A++ ++ LG+A+H   V+ C  E+  V  +  L+DM
Sbjct: 558  IFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEE--VVFSNTLLDM 615

Query: 219  YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
            YSKCGNL  A ++F ++   ++VSWT  I+ Y+R    ++ + LF EM  + V P   T+
Sbjct: 616  YSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTV 675

Query: 279  LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
             S++  C     L  G+ +H+Y+++NG   +L + NAL++MY KC  +  AR +F  +  
Sbjct: 676  TSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPV 735

Query: 339  KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            KD++ WN +I  Y+Q    ++A ELF+ M+  + +P+++TM  +L  C    AL+ G+ +
Sbjct: 736  KDIVSWNTMIGGYSQNSLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREI 794

Query: 399  HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
            H +I ++G   D+ +  ALVDMYAKCG +  A  LF     +D+  W  M+AGYGMHG G
Sbjct: 795  HGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFG 854

Query: 459  EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
             EA+  F +M  +G++P+  +F  +LNACSH+GL+ EG   F+ M +  G+ PK+EHY C
Sbjct: 855  NEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYAC 914

Query: 519  MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
            +VDLL R G L +A++ I+SMP++P+  +WG LL+  ++H +  + E  A  I E+EP N
Sbjct: 915  VVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDN 974

Query: 579  YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
              Y V+++N+YA A +W +V  +R+ M++   K+ PG S +EV G  + F+ G
Sbjct: 975  TRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAG 1027



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 162/594 (27%), Positives = 295/594 (49%), Gaps = 22/594 (3%)

Query: 2   KIKNGFLNLEQTRQ-CHAHIIKTHFKFSYTNIINPLTR-YNSLVTSYIKNNKPSSALNIY 59
           K  N F+  +Q R+ C  H        S+TN  + +T+  N+ +  + +     +A+ + 
Sbjct: 301 KSHNRFIFFKQPRRTCLLHST-VCVSPSFTNTTHSVTQNQNAKINKFCEMGDLRNAIEL- 358

Query: 60  AFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSEC 119
              +    E+   +  ++L+ CA+      GK +H   I NG+  D  +   L+ MY  C
Sbjct: 359 -LTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNC 417

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV 179
           G LV  R +FD++ N  V  W+ ++  Y + G   E++ + ++M+ + +  +      ++
Sbjct: 418 GDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVL 477

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRL 235
             FA +  V   K +H  V+      KLG     A+  +LI  Y K G +  A  LF+ L
Sbjct: 478 KCFAALGKVKECKRVHGYVL------KLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDEL 531

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
           ++  VVSW  MI+G +       G+ +F +M+   V     T++S+++    +G L LG+
Sbjct: 532 SEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGR 591

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
            LH + ++  F   +  +N L+DMY KC  +  A  +F  M    ++ W + I+AY +  
Sbjct: 592 ALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREG 651

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
               A  LF  M+   VRP+  T+  ++  C  + +L+ G+ +H+Y+ K G+  ++ +  
Sbjct: 652 LYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTN 711

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           AL++MYAKCG V  A  +FS+   +DI  WN M+ GY  +    EAL  F+DM++   KP
Sbjct: 712 ALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKP 770

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC-MVDLLGRAGLLDEAHE 534
           + IT   +L AC+    + +G+ +   ++   G    + H  C +VD+  + GLL  A  
Sbjct: 771 DDITMACVLPACAGLAALDKGREIHGHILR-RGYFSDL-HVACALVDMYAKCGLLVLAQL 828

Query: 535 MIKSMPLRPNMIVWGALLAASKLH--KNPSMGEIAATQILEIEPQNYGYNVLMS 586
           +   +P + ++I W  ++A   +H   N ++      +I  IEP    ++V+++
Sbjct: 829 LFDMIP-KKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILN 881



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 198/377 (52%), Gaps = 10/377 (2%)

Query: 36   LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
            +  + S + +Y++    S A+ ++  M+  G   D +T+ +I+ ACA       G+++H 
Sbjct: 637  IVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHS 696

Query: 96   FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            + IKNG+  +  V+NALI MY++CGS+  AR +F ++P +D+VSW+TMI GY +  LP E
Sbjct: 697  YVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNE 756

Query: 156  ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            ALE+  +M+    +P ++ M  ++   A +A +D G+ IH  ++R      L V  A AL
Sbjct: 757  ALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHV--ACAL 813

Query: 216  IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
            +DMY+KCG L  A+ LF+ + +  ++SWTVMI+GY      NE +  F EM    + P E
Sbjct: 814  VDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDE 873

Query: 276  ITILSLIIECGFVGGLQLGKWLHAYILRN--GFEFSLAMANALVDMYGKCREIRSARTLF 333
             +   ++  C   G L  G W     +RN  G E  L     +VD+  +   +  A    
Sbjct: 874  SSFSVILNACSHSGLLNEG-WKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFI 932

Query: 334  DGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP-NEVTMVGLLSLCTEAGA 391
            + M  K D  IW  ++S     H +  A ++  H  + ++ P N    V L ++  EA  
Sbjct: 933  ESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEH--IFELEPDNTRYYVVLANVYAEAEK 990

Query: 392  LEMGKWLHTYIEKQGLE 408
             E  K L   ++K+G +
Sbjct: 991  WEEVKKLRKRMQKRGFK 1007


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 211/591 (35%), Positives = 333/591 (56%), Gaps = 2/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+  Y +    +  L ++  M +   + + FT+ T+LK CA       G+ IH   I
Sbjct: 282 WNVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLII 341

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G +G+ ++   L+ MYS+CG  + A  +F  +   D+V WS +I    + G  EE+++
Sbjct: 342 KCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIK 401

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   MR  D  P++  + S++S   +  ++  G++IHACV +     +  VA++ AL+ M
Sbjct: 402 LFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWK--YGFETDVAVSNALVTM 459

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y K G +    +L+  +    ++SW   +SG   C   +  + +F  M+EE   P+  T 
Sbjct: 460 YMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTF 519

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +S++  C  +  +  G+ +HA+I++N  + +  +  AL+DMY KC  +  A   F+ +  
Sbjct: 520 ISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSV 579

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +D+  W  +I+ YAQ +  +KA   F  M+   V+PNE T+ G LS C+   +LE G+ L
Sbjct: 580 RDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQL 639

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H+ + K G   D+ + +ALVDMYAKCG +  A  LF   I RD   WN ++ GY  +G G
Sbjct: 640 HSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQG 699

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            +AL  F  M   G+ P+G+TF G+L+ACSH GLV EGK  F+ M    G+ P ++H  C
Sbjct: 700 NKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCAC 759

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVD+LGR G  DE  + I+ M L  N ++W  +L ASK+H N  +GE AA ++ E++P+ 
Sbjct: 760 MVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMHNNLVLGEKAANKLFELQPEE 819

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
               +L+SNI+A   RW+DV  VR +M    VKKEPG S VE NG VH F+
Sbjct: 820 ESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSWVEANGQVHTFV 870



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 150/516 (29%), Positives = 267/516 (51%), Gaps = 4/516 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+   +     + ++ ++  M+  G   + FT+ T LKAC+  +   LGK++H  A 
Sbjct: 181 WTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAF 240

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL  D +V +AL+ +Y++CG +  A  +F  MP ++ V+W+ ++ GY + G     L+
Sbjct: 241 KLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLK 300

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M  +D++ +E  + +++   A+  ++  G+ IH+ +++ C  E     I   L+DM
Sbjct: 301 LFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIK-CGYEG-NEFIGCGLVDM 358

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSKCG    A  +F  + +  +V W+ +I+   +  +  E ++LF  M   +  P++ TI
Sbjct: 359 YSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTI 418

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            SL+      G LQ G+ +HA + + GFE  +A++NALV MY K   +     L++ M  
Sbjct: 419 CSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVD 478

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +D++ WNA +S        D+   +F HM      PN  T + +L  C+    +  G+ +
Sbjct: 479 RDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQV 538

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H +I K  L+ +  + TAL+DMYAKC  +  A   F+    RD+  W  ++  Y     G
Sbjct: 539 HAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQG 598

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           E+AL +F  M++ GVKPN  T  G L+ CS    + EG      MV   G V  +     
Sbjct: 599 EKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASL-EGGQQLHSMVFKSGHVSDMFVGSA 657

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +VD+  + G ++EA  + +++ +R + I W  ++  
Sbjct: 658 LVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICG 692



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 262/486 (53%), Gaps = 20/486 (4%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           ++L+ CA      + K IHG  +K+ ++ D+++  +L+ +Y++C     AR +  +MP+R
Sbjct: 117 SMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDR 176

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
           DVVSW+ +I+G    G   +++ + +EM+   I P+E  + + +   +    +DLGK +H
Sbjct: 177 DVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMH 236

Query: 196 ACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           A      +  KLG+     + +AL+D+Y+KCG +  A ++F  + + + V+W V+++GY 
Sbjct: 237 A------QAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYA 290

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +  ++   ++LF  M+E +V  +E T+ +++  C     L+ G+ +H+ I++ G+E +  
Sbjct: 291 QRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEF 350

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           +   LVDMY KC     A  +F  +K  D+++W+A+I+   Q    +++ +LF  M++  
Sbjct: 351 IGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGD 410

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
             PN+ T+  LLS  T  G L+ G+ +H  + K G E DV +  ALV MY K G V+   
Sbjct: 411 TLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGT 470

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCG--EEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           +L+   + RD+  WNA ++  G+H CG  +  L  F  M   G  PN  TFI +L +CS 
Sbjct: 471 KLYESMVDRDLISWNAYLS--GLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSC 528

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGC--MVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
              V  G+ V     H +       ++ C  ++D+  +   L++A      + +R ++  
Sbjct: 529 LFDVHYGRQVH---AHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVR-DLFT 584

Query: 548 WGALLA 553
           W  ++ 
Sbjct: 585 WTVIIT 590



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 120/263 (45%), Gaps = 35/263 (13%)

Query: 14  RQCHAHIIKTHF---KFSYTNIIN---------------------PLTRYNSLVTSYIKN 49
           RQ HAHIIK       F  T +I+                      L  +  ++T+Y + 
Sbjct: 536 RQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQT 595

Query: 50  NKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVS 109
           N+   ALN +  M++ G + + FT+   L  C+ +     G+++H    K+G   D +V 
Sbjct: 596 NQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVG 655

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
           +AL+ MY++CG +  A  LF+ +  RD ++W+T+I GY + G   +AL   R M    I 
Sbjct: 656 SALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGIS 715

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA----TALIDMYSKCGNL 225
           P  V    ++S  +    V+ GK     + R+      G++        ++D+  + G  
Sbjct: 716 PDGVTFTGILSACSHQGLVEEGKEHFNSMYRD-----FGISPTVDHCACMVDILGRVGKF 770

Query: 226 AYAKQLFNR--LNQNSVVSWTVM 246
              +    +  L+QN+++  TV+
Sbjct: 771 DELEDFIQKMQLSQNALIWETVL 793


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 212/581 (36%), Positives = 349/581 (60%), Gaps = 47/581 (8%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           K+ HG  I+ G   D Y ++ L  M   S   SL  AR +FDE+P  +  +W+T+IR Y 
Sbjct: 47  KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106

Query: 149 RGGLPEEALEVMREMRFMDI------RPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
            G  P     V+    F+D+       P++     ++   A+V+ + LG+++H   V++ 
Sbjct: 107 SGPDP-----VLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA 161

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
                 V +A +LI  Y  CG+L  A ++F  + +  VVSW  MI+G+++    ++ + L
Sbjct: 162 VGSD--VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALEL 219

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F +M  E+V  S +T++ ++  C  +  L+ G+ + +YI  N    +L +ANA++DMY K
Sbjct: 220 FKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTK 279

Query: 323 CREIRSARTLFDGMK-------------------------------SKDVMIWNAVISAY 351
           C  I  A+ LFD M+                                KD++ WNA+ISAY
Sbjct: 280 CGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAY 339

Query: 352 AQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
            Q    ++A  +F  +++ K ++ N++T+V  LS C + GALE+G+W+H+YI+K G+ ++
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMN 399

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
             + +AL+ MY+KCGD+  +  +F+    RD+ +W+AM+ G  MHGCG EA+  F  M+ 
Sbjct: 400 FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQE 459

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
           + VKPNG+TF  +  ACSH GLV E +S+F +M    G+VP+ +HY C+VD+LGR+G L+
Sbjct: 460 ANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLE 519

Query: 531 EAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYA 590
           +A + I++MP+ P+  VWGALL A K+H N ++ E+A T++LE+EP+N G +VL+SNIYA
Sbjct: 520 KAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYA 579

Query: 591 VANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
              +W +V+ +R+ M+   +KKEPG SS+E++G++H+F+ G
Sbjct: 580 KLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSG 620



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 268/513 (52%), Gaps = 69/513 (13%)

Query: 8   LNLEQTRQCHAHIIKT-------------------------HFKFSYTNIINPLT-RYNS 41
           ++L Q +Q H H+I+T                         + +  +  I  P +  +N+
Sbjct: 41  VSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNT 100

Query: 42  LVTSYIKNNKPSSALNIYAFM---RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           L+ +Y     P   L+I+AF+    ++    + +T P ++KA A+V    LG+ +HG A+
Sbjct: 101 LIRAYASG--PDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAV 158

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+ +  D +V+N+LI  Y  CG L SA  +F  +  +DVVSW++MI G+ + G P++ALE
Sbjct: 159 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 218

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + ++M   D++ S V M+ ++S  A + +++ G+ + + +  N     + + +A A++DM
Sbjct: 219 LFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEEN--RVNVNLTLANAMLDM 276

Query: 219 YSKCGNLAYAKQLF-------------------------------NRLNQNSVVSWTVMI 247
           Y+KCG++  AK+LF                               N + Q  +V+W  +I
Sbjct: 277 YTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALI 336

Query: 248 SGYIRCNEINEGVRLFAEM-IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           S Y +  + NE + +F E+ +++N+  ++IT++S +  C  VG L+LG+W+H+YI ++G 
Sbjct: 337 SAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGI 396

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
             +  + +AL+ MY KC ++  +R +F+ ++ +DV +W+A+I   A   C ++A ++F  
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYK 456

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCG 425
           M+ + V+PN VT   +   C+  G ++  + L   +E   G+  +      +VD+  + G
Sbjct: 457 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSG 516

Query: 426 DVNGAYRLFSEA--IYRDICMWNAMMAGYGMHG 456
            +  A + F EA  I     +W A++    +H 
Sbjct: 517 YLEKAVK-FIEAMPIPPSTSVWGALLGACKIHA 548


>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
 gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
          Length = 838

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/607 (36%), Positives = 352/607 (57%), Gaps = 9/607 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGS-----EVDNFTIPTILKACAQVLMTHLGKEI 93
           +N+L+ SY    +    L+++  M    S       DN+++   LK+CA +    LGK I
Sbjct: 205 WNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVI 264

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HGF  K  +DGD +V +ALI +Y++CG +  A  +F E P  DVV W+++I GY + G P
Sbjct: 265 HGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSP 324

Query: 154 EEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
           E AL     M   + + P  V ++S+ S  A +++  LG+++H  V R   D KL   +A
Sbjct: 325 ELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKL--CLA 382

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            +L+ +Y K G++  A  LF  ++   ++SW+ M++ Y       + + LF EM+++ + 
Sbjct: 383 NSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIK 442

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P+ +T++S++  C  +  L+ G  +H   +  GFE    ++ AL+DMY KC     A  L
Sbjct: 443 PNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDL 502

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ M  KDV+ W  + S YA    + ++  +F +M  S  RP+ + +V +L+  +E G L
Sbjct: 503 FNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGIL 562

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           +    LH ++ K G E +  +  +L+++YAKC  +  A ++F    Y+D+  W++++A Y
Sbjct: 563 QQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAY 622

Query: 453 GMHGCGEEALIFFVDM-ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           G HG GEEAL  F  M   S  KPN +TFI +L+ACSH+GL+ EG ++FD MV+   L P
Sbjct: 623 GFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKP 682

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
             EHY  MVDLLGR G LD A ++I +MP++    +WGALL A ++H+N  MGE+AA  +
Sbjct: 683 NSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNL 742

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             ++P + GY +L+SNIY+V   W+    +RR++KE R+ K  G S VE+   V  FI G
Sbjct: 743 FSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAG 802

Query: 632 GMVNWKS 638
             ++ +S
Sbjct: 803 DRIHDES 809



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 249/501 (49%), Gaps = 22/501 (4%)

Query: 68  EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY 127
           E  N  +  +   C+++ ++ L    H   +K GL  D+++   L  +Y+   S+  A  
Sbjct: 137 ERRNLLVKLLETCCSKLSISQL----HSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHK 192

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR-----FMDIRPSEVAMISMVSLF 182
           LF E P+R V  W+ ++R Y   G   E L + R+M       ++ RP   ++   +   
Sbjct: 193 LFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSC 252

Query: 183 ADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVS 242
           A +  + LGK IH  + +   D  + V   +ALID+Y+KCG +  A ++F    +  VV 
Sbjct: 253 AGLRKLLLGKVIHGFLKKVRIDGDMFV--GSALIDLYTKCGQMNDAVKVFMEYPKPDVVL 310

Query: 243 WTVMISGYIRCNEINEGVRLFAEM-IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           WT +ISGY +       +  F+ M + E V P  +T++S+   C  +   +LG+ +H ++
Sbjct: 311 WTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFV 370

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
            R G +  L +AN+L+ +YGK   I++A  LF  M  KD++ W+ +++ YA         
Sbjct: 371 KRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVL 430

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
           +LF  M   +++PN VT+V +L  C     LE G  +H      G E++  + TAL+DMY
Sbjct: 431 DLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMY 490

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
            KC     A  LF+    +D+  W  + +GY  +G   E++  F +M  SG +P+ I  +
Sbjct: 491 MKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALV 550

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIK 537
            +L   S  G++ +        +H   +    E+       ++++  +   +++A+++ K
Sbjct: 551 KILTTISELGILQQAVC-----LHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFK 605

Query: 538 SMPLRPNMIVWGALLAASKLH 558
            M  + +++ W +++AA   H
Sbjct: 606 GMTYK-DVVTWSSIIAAYGFH 625



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 95/197 (48%), Gaps = 22/197 (11%)

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
           +V LL  C    ++     LH+   K GL  D  + T L  +YA+   ++ A++LF E  
Sbjct: 142 LVKLLETCCSKLSISQ---LHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETP 198

Query: 439 YRDICMWNAMMAGYGMHGCGEEALIFFVDMER-SGV----KPNGITFIGLLNACSHAGLV 493
           +R + +WNA++  Y   G   E L  F  M   S V    +P+  +    L +C  AGL 
Sbjct: 199 HRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSC--AGL- 255

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCM------VDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
              K +  K++H  G + K+   G M      +DL  + G +++A ++    P +P++++
Sbjct: 256 --RKLLLGKVIH--GFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYP-KPDVVL 310

Query: 548 WGALLAASKLHKNPSMG 564
           W ++++  +   +P + 
Sbjct: 311 WTSIISGYEQSGSPELA 327


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 1005

 Score =  420 bits (1079), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/594 (37%), Positives = 337/594 (56%), Gaps = 8/594 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVD--NFTIPTILKACAQVLMTHLGKEIHGF 96
           +N+L+  + +       LN+  F R  GSE++   FT+ T+LK CA       G+ +H  
Sbjct: 298 WNALLNGFAQMGDAEKVLNL--FCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSL 355

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
           AI+ G + D ++S  L+ MYS+CG    A  +F  + + DVVSWS +I    + G   EA
Sbjct: 356 AIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREA 415

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK-DEKLGVAIATAL 215
            EV + MR   + P++  + S+VS   D+ D+  G++IHACV   CK   +    +  AL
Sbjct: 416 AEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACV---CKYGFEYDNTVCNAL 472

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           + MY K G++    ++F       ++SW  ++SG+      + G+R+F +M+ E   P+ 
Sbjct: 473 VTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNM 532

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T +S++  C  +  + LGK +HA I++N  + +  +  ALVDMY K R +  A T+F+ 
Sbjct: 533 YTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNR 592

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +  +D+  W  +++ YAQ    +KA + FI M+   V+PNE T+   LS C+    L+ G
Sbjct: 593 LIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG 652

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + LH+   K G   D+ + +ALVDMYAKCG V  A  +F   + RD   WN ++ GY  H
Sbjct: 653 RQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQH 712

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G G +AL  F  M   G  P+ +TFIG+L+ACSH GL+ EGK  F+ +    G+ P IEH
Sbjct: 713 GQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEH 772

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y CMVD+LGRAG   E    I+ M L  N+++W  +L A K+H N   GE AA ++ E+E
Sbjct: 773 YACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELE 832

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           P+     +L+SN++A    W+DV  VR +M    VKKEPG S VEVNG VH F+
Sbjct: 833 PEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFL 886



 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 154/521 (29%), Positives = 272/521 (52%), Gaps = 6/521 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+T ++     S A+N++  MR+ G E + FT  T LKAC+  L    GK++H  AI
Sbjct: 197 WTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAI 256

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   D +V +AL+ +Y++CG +V A  +F  MP ++ VSW+ ++ G+ + G  E+ L 
Sbjct: 257 KVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLN 316

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALID 217
           +   M   +I  S+  + +++   A+  ++  G+ +H+  +R  C+ ++    I+  L+D
Sbjct: 317 LFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEF---ISCCLVD 373

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYSKCG    A ++F R+    VVSW+ +I+   +  +  E   +F  M    V P++ T
Sbjct: 374 MYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFT 433

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           + SL+     +G L  G+ +HA + + GFE+   + NALV MY K   ++    +F+   
Sbjct: 434 LASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATT 493

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           ++D++ WNA++S +      D    +F  M      PN  T + +L  C+    +++GK 
Sbjct: 494 NRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQ 553

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H  I K  L+ +  + TALVDMYAK   +  A  +F+  I RD+  W  ++AGY   G 
Sbjct: 554 VHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQ 613

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           GE+A+  F+ M+R GVKPN  T    L+ CS    +  G+ +    +   G    +    
Sbjct: 614 GEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKA-GQSGDMFVAS 672

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            +VD+  + G +++A  +   +  R + + W  ++     H
Sbjct: 673 ALVDMYAKCGCVEDAEVVFDGLVSR-DTVSWNTIICGYSQH 712



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 151/510 (29%), Positives = 262/510 (51%), Gaps = 15/510 (2%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +L+ CA     + GK IHG  IK+G++ D+++ N+L+ +Y++CGS   A  +F E+P RD
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           VVSW+ +I G+   G    A+ +  EMR   +  +E    + +   +   D++ GK +HA
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
             ++      L V   +AL+D+Y+KCG +  A+++F  + + + VSW  +++G+ +  + 
Sbjct: 254 EAIKVGDFSDLFVG--SALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDA 311

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
            + + LF  M    +  S+ T+ +++  C   G L+ G+ +H+  +R G E    ++  L
Sbjct: 312 EKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCL 371

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           VDMY KC     A  +F  ++  DV+ W+A+I+   Q     +A E+F  M+ S V PN+
Sbjct: 372 VDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQ 431

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
            T+  L+S  T+ G L  G+ +H  + K G E D  +  ALV MY K G V    R+F  
Sbjct: 432 FTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEA 491

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
              RD+  WNA+++G+  +   +  L  F  M   G  PN  TFI +L +CS    V  G
Sbjct: 492 TTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG 551

Query: 497 KSVFDKMVH----GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           K V  ++V     G   V        +VD+  +   L++A E I +  ++ ++  W  ++
Sbjct: 552 KQVHAQIVKNSLDGNDFVGTA-----LVDMYAKNRFLEDA-ETIFNRLIKRDLFAWTVIV 605

Query: 553 AASKLHKNPSMGEIAATQILEIEPQNYGYN 582
           A    +     GE A    ++++ +    N
Sbjct: 606 AG---YAQDGQGEKAVKCFIQMQREGVKPN 632



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 173/318 (54%), Gaps = 6/318 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+L++ +  N    + L I+  M   G   + +T  +IL++C+ +    LGK++H 
Sbjct: 497 LISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHA 556

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +KN LDG+ +V  AL+ MY++   L  A  +F+ +  RD+ +W+ ++ GY + G  E+
Sbjct: 557 QIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEK 616

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A++   +M+   ++P+E  + S +S  + +A +D G+ +H+  ++    +   + +A+AL
Sbjct: 617 AVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIK--AGQSGDMFVASAL 674

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+KCG +  A+ +F+ L     VSW  +I GY +  +  + ++ F  M++E   P E
Sbjct: 675 VDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDE 734

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRN--GFEFSLAMANALVDMYGKCREIRSARTLF 333
           +T + ++  C  +G ++ GK  H   L    G   ++     +VD+ G+  +     +  
Sbjct: 735 VTFIGVLSACSHMGLIEEGK-KHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFI 793

Query: 334 DGMK-SKDVMIWNAVISA 350
           + MK + +V+IW  V+ A
Sbjct: 794 EEMKLTSNVLIWETVLGA 811



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 86/172 (50%), Gaps = 2/172 (1%)

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
           G+L  C   G L  GK +H  + K G+  D  L  +LV++YAKCG  N A ++F E   R
Sbjct: 133 GMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPER 192

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           D+  W A++ G+   G G  A+  F +M R GV+ N  T+   L ACS    +  GK V 
Sbjct: 193 DVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVH 252

Query: 501 DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
            + +  +G    +     +VDL  + G +  A  +   MP + N + W ALL
Sbjct: 253 AEAIK-VGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMP-KQNAVSWNALL 302


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/598 (37%), Positives = 341/598 (57%), Gaps = 8/598 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N LV  Y K      ALN+Y  M   G   D +T P +L+ C  +     G+E+H 
Sbjct: 160 LFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHL 219

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             I+ G + D  V NALI MY +CG + SAR +FD MP RD +SW+ MI GY    +  E
Sbjct: 220 HVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLE 279

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            L +   MR   + P  + M S++S    + D  LG+ +H  V++     +  V++  +L
Sbjct: 280 GLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAE--VSVNNSL 337

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I M+S  G    A+ +F+++    +VSWT MISGY +     + V  +  M  E V P E
Sbjct: 338 IQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDE 397

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           ITI S++  C  +G L  G  LH +  R G    + +AN+L+DMY KCR I  A  +F  
Sbjct: 398 ITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHR 457

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFE--LFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + +K+V+ W ++I      +   ++FE   F    +  ++PN VT+V +LS C   GAL 
Sbjct: 458 IPNKNVISWTSIILGLRLNY---RSFEALFFFQQMILSLKPNSVTLVSVLSACARIGALS 514

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            GK +H +  + GL  D  L  AL+DMY +CG +  A+  F+ +  +D+  WN ++ GY 
Sbjct: 515 CGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFN-SCEKDVASWNILLTGYA 573

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
             G G  A+  F  M  S V P+ ITF  LL ACS +G+VT+G   F+ M H   + P +
Sbjct: 574 QQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNL 633

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           +HY  +VDLLGRAG L++A+E IK MP+ P+  +WGALL A ++++N  +GE+AA  I E
Sbjct: 634 KHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFE 693

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           ++ ++ GY +L+ N+YA + +W++VA VR++M+E R+  +PG S VEV G VH F+ G
Sbjct: 694 MDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTG 751



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 161/548 (29%), Positives = 275/548 (50%), Gaps = 18/548 (3%)

Query: 12  QTRQCHAHIIKTHFKFSYTNIINPLT----RYNSLVTSYIKNNKPSSALNIYAFMRKNGS 67
           QTRQ     ++ H + S   ++NP +      NSL+           AL     M++   
Sbjct: 37  QTRQIS---LRKHHEIS---VLNPSSITAQNPNSLILELCLKGDLEKALIHLDSMQELQV 90

Query: 68  EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY 127
            V+  T   +L+ C        G  +H +  K        + NAL+ M+   G LV A Y
Sbjct: 91  SVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWY 150

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           +F +M  RD+ SW+ ++ GY + G  +EAL +   M ++ IRP       ++     + D
Sbjct: 151 VFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPD 210

Query: 188 VDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           +  G+ +H  V+R   +    V +  ALI MY KCG++  A+ +F+R+ +   +SW  MI
Sbjct: 211 LARGREVHLHVIRYGFESD--VDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMI 268

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           SGY   +   EG+RLF  M E  V P  +T+ S+I  C  +G  +LG+ +H Y+++ GF 
Sbjct: 269 SGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFV 328

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             +++ N+L+ M+        A  +F  M+ KD++ W A+IS Y +    +KA E +  M
Sbjct: 329 AEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIM 388

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           +   V P+E+T+  +LS C   G L+ G  LH + ++ GL   VI+  +L+DMY+KC  +
Sbjct: 389 EHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCI 448

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
           + A  +F     +++  W +++ G  ++    EAL FF  M  S +KPN +T + +L+AC
Sbjct: 449 DKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSAC 507

Query: 488 SHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
           +  G ++ GK +    +  GLG    + +   ++D+  R G ++ A     S     ++ 
Sbjct: 508 ARIGALSCGKEIHAHALRTGLGFDGFLPN--ALLDMYVRCGRMEPAWNQFNS--CEKDVA 563

Query: 547 VWGALLAA 554
            W  LL  
Sbjct: 564 SWNILLTG 571



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/483 (27%), Positives = 242/483 (50%), Gaps = 16/483 (3%)

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           E+AL  +  M+ + +   E   I+++ L         G  +H+ V +     +LGV +  
Sbjct: 76  EKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVT--RLGVRLGN 133

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+ M+ + G+L  A  +F ++ +  + SW V++ GY +    +E + L+  M+   + P
Sbjct: 134 ALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRP 193

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T   ++  CG +  L  G+ +H +++R GFE  + + NAL+ MY KC +I SAR +F
Sbjct: 194 DVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVF 253

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           D M  +D + WNA+IS Y +     +   LF  M+   V P+ +TM  ++S C   G   
Sbjct: 254 DRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDER 313

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           +G+ +H Y+ K G   +V +  +L+ M++  G  + A  +FS+  ++D+  W AM++GY 
Sbjct: 314 LGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYE 373

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +G  E+A+  +  ME  GV P+ IT   +L+AC+  GL+ +G  +  +     GL   +
Sbjct: 374 KNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKG-IMLHEFADRTGLTSYV 432

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ-IL 572
                ++D+  +   +D+A E+   +P + N+I W +++   +L+           Q IL
Sbjct: 433 IVANSLIDMYSKCRCIDKALEVFHRIPNK-NVISWTSIILGLRLNYRSFEALFFFQQMIL 491

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR---VKKEPGFSSVEVNGLVHKFI 629
            ++P +     L+S + A A       G     KEI    ++   GF     N L+  ++
Sbjct: 492 SLKPNSV---TLVSVLSACAR-----IGALSCGKEIHAHALRTGLGFDGFLPNALLDMYV 543

Query: 630 RGG 632
           R G
Sbjct: 544 RCG 546


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/591 (37%), Positives = 347/591 (58%), Gaps = 4/591 (0%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           L  S  +++ P+ AL  +  M   G+     T  ++LK CA       G+ +H      G
Sbjct: 31  LRASAARSDLPA-ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARG 89

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
           +D +A  + AL  MY++C     AR +FD MP RD V+W+ ++ GY R GL   A+E++ 
Sbjct: 90  IDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVV 149

Query: 162 EMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
            M+  +  RP  + ++S++   A+   +   +  HA  +R+  +E   V +ATA++D Y 
Sbjct: 150 RMQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEEL--VNVATAILDAYC 207

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           KCG++  A+ +F+ +   + VSW  MI GY +  +  E + LF  M+EE V  +++++L+
Sbjct: 208 KCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLA 267

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
            +  CG +G L  G  +H  ++R G + ++++ NAL+ MY KC+ +  A  +FD +  + 
Sbjct: 268 ALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRT 327

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
            + WNA+I   AQ  C + A  LF  M++  V+P+  T+V ++    +       +W+H 
Sbjct: 328 QVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHG 387

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
           Y  +  L+ DV + TAL+DMYAKCG VN A  LF+ A  R +  WNAM+ GYG HG G+ 
Sbjct: 388 YSIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKA 447

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           A+  F +M+  G+ PN  TF+ +L+ACSHAGLV EG+  F  M    GL P +EHYG MV
Sbjct: 448 AVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMV 507

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYG 580
           DLLGRAG LDEA   I+ MP+ P + V+GA+L A KLHKN  + E +A +I E+ PQ   
Sbjct: 508 DLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGV 567

Query: 581 YNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           Y+VL++NIYA A+ W DVA VR  M++  ++K PG+S +++   +H F  G
Sbjct: 568 YHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSG 618



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 185/373 (49%), Gaps = 7/373 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y +N     AL ++  M + G +V + ++   L+AC ++     G  +H   +
Sbjct: 230 WNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLV 289

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + GLD +  V NALI MYS+C  +  A ++FDE+  R  VSW+ MI G  + G  E+A+ 
Sbjct: 290 RIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVR 349

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M+  +++P    ++S++   AD++D    + IH   +R   D+   V + TALIDM
Sbjct: 350 LFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQD--VYVLTALIDM 407

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG +  A+ LFN   +  V++W  MI GY         V LF EM    + P+E T 
Sbjct: 408 YAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTF 467

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           LS++  C   G +  G+     +  + G E  +     +VD+ G+  ++  A      M 
Sbjct: 468 LSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP 527

Query: 338 -SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE-VTMVGLLSLCTEAGALEMG 395
               + ++ A++ A      ++ A E     K+ ++ P E V  V L ++   A   +  
Sbjct: 528 MDPGLSVYGAMLGACKLHKNVELAEE--SAQKIFELGPQEGVYHVLLANIYANASMWKDV 585

Query: 396 KWLHTYIEKQGLE 408
             + T +EK GL+
Sbjct: 586 ARVRTAMEKNGLQ 598



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 69/141 (48%), Gaps = 1/141 (0%)

Query: 345 NAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK 404
           +A + A A    +  A   F+ M  +   P   T   LL LC   G L  G+ +H  +  
Sbjct: 28  HARLRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAA 87

Query: 405 QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIF 464
           +G++ + +  TAL +MYAKC     A R+F     RD   WNA++AGY  +G    A+  
Sbjct: 88  RGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEM 147

Query: 465 FVDM-ERSGVKPNGITFIGLL 484
            V M E  G +P+ IT + +L
Sbjct: 148 VVRMQEEEGERPDSITLVSVL 168


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/598 (36%), Positives = 347/598 (58%), Gaps = 14/598 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +N LV  +  N+ PSS++++Y  +R+N +   DNFT    + AC+      L   +H  +
Sbjct: 78  FNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLML---LHAHS 134

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           I +G   + +V +AL+ +Y +   +V AR +FD MP RD V W+TMI G  +    ++++
Sbjct: 135 IIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSI 194

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IAT 213
           ++ REM    +R     + +++   A++ ++ +G  I       C   K+G      + T
Sbjct: 195 QLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQ------CLALKIGFGFCDYVLT 248

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
            LI +YSKCG++  A+ LF R+N+  ++++  MISG+         V+LF E++      
Sbjct: 249 GLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERV 308

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           S  TI+ LI      G L L   +H + +++G   +  ++ A   +Y K  EI  AR LF
Sbjct: 309 SSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLF 368

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           D    K V+ WNA+IS Y Q    + A  LF  M  ++  PN VT+  +LS C + G+L 
Sbjct: 369 DESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLS 428

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            GKW+H  I+ + LE ++ + TALVDMYAKCG+++ A++LF     ++   WN M+ GYG
Sbjct: 429 FGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYG 488

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
           +HG G EAL  + +M   G  P+ +TF+ +L ACSHAGLV EG+ +F  MV+   + P I
Sbjct: 489 LHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLI 548

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHY CMVD+LGR+G L++A E IK MP+ P   VWG LL A  +HK+  +  +A+ ++ E
Sbjct: 549 EHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFE 608

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           ++P + GY VL+SNIY+V   +   A +R+V+K+ ++ K PG + +EVNG  H F+ G
Sbjct: 609 LDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSG 666



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 167/319 (52%), Gaps = 8/319 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  YN++++ +  N     ++ ++  +  +G  V + TI  ++   +     HL   IHG
Sbjct: 275 LIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHG 334

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F +K+G+  +  VS A   +Y++   +  AR+LFDE P + VV+W+ MI GY + G  E 
Sbjct: 335 FCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTET 394

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL--GVAIAT 213
           A+ + +EM   +  P+ V + +++S  A +  +  GK +H  +    K E L   + ++T
Sbjct: 395 AISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLI----KSENLEPNIYVST 450

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMY+KCGN++ A QLF+ +++ + V+W  MI GY      +E ++L+ EM+     P
Sbjct: 451 ALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNP 510

Query: 274 SEITILSLIIECGFVGGLQLGKWL-HAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           S +T LS++  C   G +  G+ + H  + +   E  +     +VD+ G+  ++  A   
Sbjct: 511 SAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEF 570

Query: 333 FDGMKSKD-VMIWNAVISA 350
              M  +    +W  ++ A
Sbjct: 571 IKKMPVEPGPAVWGTLLGA 589



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/258 (22%), Positives = 116/258 (44%), Gaps = 8/258 (3%)

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           HA  + NG+ F LA    L          R AR LF  +   D+ ++N ++  ++     
Sbjct: 32  HAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFNVLVRGFSLNDSP 91

Query: 358 DKAFELFIHMKV-SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
             +  L+ H++  + + P+  T    ++ C+    L +   LH +    G   +V + +A
Sbjct: 92  SSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLML---LHAHSIIDGYGSNVFVGSA 148

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           LVD+Y K   V  A ++F     RD  +WN M+ G   + C ++++  F +M   GV+ +
Sbjct: 149 LVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVD 208

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEM 535
             T   +L A +    +  G  +    +  G G    +     ++ L  + G ++ A  +
Sbjct: 209 SSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYV--LTGLISLYSKCGDVNTARLL 266

Query: 536 IKSMPLRPNMIVWGALLA 553
            + +  RP++I + A+++
Sbjct: 267 FRRIN-RPDLIAYNAMIS 283


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 226/598 (37%), Positives = 341/598 (57%), Gaps = 8/598 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N LV  Y K      ALN+Y  M   G   D +T P +L+ C  +     G+E+H 
Sbjct: 160 LFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHL 219

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             I+ G + D  V NALI MY +CG + SAR +FD MP RD +SW+ MI GY    +  E
Sbjct: 220 HVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLE 279

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            L +   MR   + P  + M S++S    + D  LG+ +H  V++     +  V++  +L
Sbjct: 280 GLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAE--VSVNNSL 337

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I M+S  G    A+ +F+++    +VSWT MISGY +     + V  +  M  E V P E
Sbjct: 338 IQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDE 397

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           ITI S++  C  +G L  G  LH +  R G    + +AN+L+DMY KCR I  A  +F  
Sbjct: 398 ITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHR 457

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFE--LFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + +K+V+ W ++I      +   ++FE   F    +  ++PN VT+V +LS C   GAL 
Sbjct: 458 IPNKNVISWTSIILGLRLNY---RSFEALFFFQQMILSLKPNSVTLVSVLSACARIGALS 514

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            GK +H +  + GL  D  L  AL+DMY +CG +  A+  F+ +  +D+  WN ++ GY 
Sbjct: 515 CGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFN-SCEKDVASWNILLTGYA 573

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
             G G  A+  F  M  S V P+ ITF  LL ACS +G+VT+G   F+ M H   + P +
Sbjct: 574 QQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNL 633

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           +HY  +VDLLGRAG L++A+E IK MP+ P+  +WGALL A ++++N  +GE+AA  I E
Sbjct: 634 KHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFE 693

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           ++ ++ GY +L+ N+YA + +W++VA VR++M+E R+  +PG S VEV G VH F+ G
Sbjct: 694 MDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVEVAGQVHAFLTG 751



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 161/548 (29%), Positives = 275/548 (50%), Gaps = 18/548 (3%)

Query: 12  QTRQCHAHIIKTHFKFSYTNIINPLT----RYNSLVTSYIKNNKPSSALNIYAFMRKNGS 67
           QTRQ     ++ H + S   ++NP +      NSL+           AL     M++   
Sbjct: 37  QTRQIS---LRKHHEIS---VLNPSSITAQNPNSLILELCLKGDLEKALIHLDSMQELQV 90

Query: 68  EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY 127
            V+  T   +L+ C        G  +H +  K        + NAL+ M+   G LV A Y
Sbjct: 91  SVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWY 150

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           +F +M  RD+ SW+ ++ GY + G  +EAL +   M ++ IRP       ++     + D
Sbjct: 151 VFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPD 210

Query: 188 VDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           +  G+ +H  V+R   +    V +  ALI MY KCG++  A+ +F+R+ +   +SW  MI
Sbjct: 211 LARGREVHLHVIRYGFESD--VDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMI 268

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           SGY   +   EG+RLF  M E  V P  +T+ S+I  C  +G  +LG+ +H Y+++ GF 
Sbjct: 269 SGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFV 328

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             +++ N+L+ M+        A  +F  M+ KD++ W A+IS Y +    +KA E +  M
Sbjct: 329 AEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIM 388

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           +   V P+E+T+  +LS C   G L+ G  LH + ++ GL   VI+  +L+DMY+KC  +
Sbjct: 389 EHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCI 448

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
           + A  +F     +++  W +++ G  ++    EAL FF  M  S +KPN +T + +L+AC
Sbjct: 449 DKALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQMILS-LKPNSVTLVSVLSAC 507

Query: 488 SHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
           +  G ++ GK +    +  GLG    + +   ++D+  R G ++ A     S     ++ 
Sbjct: 508 ARIGALSCGKEIHAHALRTGLGFDGFLPN--ALLDMYVRCGRMEPAWNQFNS--CEKDVA 563

Query: 547 VWGALLAA 554
            W  LL  
Sbjct: 564 SWNILLTG 571



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/483 (27%), Positives = 242/483 (50%), Gaps = 16/483 (3%)

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           E+AL  +  M+ + +   E   I+++ L         G  +H+ V +     +LGV +  
Sbjct: 76  EKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVT--RLGVRLGN 133

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+ M+ + G+L  A  +F ++ +  + SW V++ GY +    +E + L+  M+   + P
Sbjct: 134 ALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRP 193

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T   ++  CG +  L  G+ +H +++R GFE  + + NAL+ MY KC +I SAR +F
Sbjct: 194 DVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVF 253

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           D M  +D + WNA+IS Y +     +   LF  M+   V P+ +TM  ++S C   G   
Sbjct: 254 DRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDER 313

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           +G+ +H Y+ K G   +V +  +L+ M++  G  + A  +FS+  ++D+  W AM++GY 
Sbjct: 314 LGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYE 373

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +G  E+A+  +  ME  GV P+ IT   +L+AC+  GL+ +G  +  +     GL   +
Sbjct: 374 KNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKG-IMLHEFADRTGLTSYV 432

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ-IL 572
                ++D+  +   +D+A E+   +P + N+I W +++   +L+           Q IL
Sbjct: 433 IVANSLIDMYSKCRCIDKALEVFHRIPNK-NVISWTSIILGLRLNYRSFEALFFFQQMIL 491

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR---VKKEPGFSSVEVNGLVHKFI 629
            ++P +     L+S + A A       G     KEI    ++   GF     N L+  ++
Sbjct: 492 SLKPNSV---TLVSVLSACAR-----IGALSCGKEIHAHALRTGLGFDGFLPNALLDMYV 543

Query: 630 RGG 632
           R G
Sbjct: 544 RCG 546


>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 904

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 234/626 (37%), Positives = 352/626 (56%), Gaps = 35/626 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YNSL+  Y  +     A+ ++  M  +G   D +T P  L  CA+      G +IHG  I
Sbjct: 101 YNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLII 160

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K     D +V N+L+  Y+ECG L  AR +FDEM  R+VVSW++MI GY R    ++A++
Sbjct: 161 KMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVD 220

Query: 159 V-MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           +  R +R  D+ P+ V M+ ++S  A + D++ G+ ++   +R+   E   + I +AL+D
Sbjct: 221 LFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYD-FIRDSGIEVNDLMI-SALVD 278

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY KC  +  AK+LF+    +++     M S Y+R     E + +   M++  + P  I+
Sbjct: 279 MYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRIS 338

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           +LS I  C  +  +  GK  H Y+LRNGFE    + NAL+DMY KC    +A  +FD M 
Sbjct: 339 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 398

Query: 338 SKDVMIWNA-------------------------------VISAYAQAHCIDKAFELFIH 366
           +K V+ WN+                               +ISA  Q +  ++A E+F +
Sbjct: 399 NKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHY 458

Query: 367 MKVSK-VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
           M+  + V  + VTM+ + S C   GAL++ KW++ YIEK  +++DV L T LVDM+++CG
Sbjct: 459 MQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCG 518

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
           D   A  +F+    RD+  W A +    M G  E A+  F +M   G+KP+G+ FIG L 
Sbjct: 519 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALT 578

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
           AC H GLV +GK +F+ M    G+ P+  HYGCMVDLLGRAGLL+EA ++IK MP  PN 
Sbjct: 579 ACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPND 638

Query: 546 IVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVM 605
           ++W +LLAA ++  N  M   AA +I  + P+  G  VL+SN+YA A RWND+A VR  M
Sbjct: 639 VIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSM 698

Query: 606 KEIRVKKEPGFSSVEVNGLVHKFIRG 631
           KE  ++K PG S +++ G  H+F  G
Sbjct: 699 KEKGLRKPPGTSVIQIRGKTHEFTSG 724



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 236/505 (46%), Gaps = 43/505 (8%)

Query: 75  PTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN 134
           P+ LK C  +      K  H    K GLD D      L+    E G+  S  +  +   N
Sbjct: 35  PSSLKNCKTIDEL---KMFHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAKEVFEN 91

Query: 135 RD----VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
            +       ++++IRGY   GL +EA+ +   M    I P +      +S+ A   D   
Sbjct: 92  GESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGN 151

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           G  IH  +++   D    + +  +L+  Y++CG L  A+++F+ +++ +VVSWT MI GY
Sbjct: 152 GIQIHGLIIK--MDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGY 209

Query: 251 IRCNEINEGVRLFAEMI-EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
            R     + V LF  M+ +E+V P+ +T++ +I  C  +  L+ G+ ++ +I  +G E +
Sbjct: 210 ARREFAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVN 269

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
             M +ALVDMY KC  I  A+ LFD   + ++ + NA+ S Y +     +A  +   M  
Sbjct: 270 DLMISALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMD 329

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
           S +RP+ ++M+  +S C++   +  GK  H Y+ + G E    +  AL+DMY KC   + 
Sbjct: 330 SGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDT 389

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHG-------------------------------CG 458
           A+R+F     + +  WN+++AGY  +G                                 
Sbjct: 390 AFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMY 449

Query: 459 EEALIFFVDME-RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           EEA+  F  M+ +  V  +G+T + + +AC H G +   K ++   +    +   +    
Sbjct: 450 EEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIY-YYIEKNRIQLDVRLGT 508

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLR 542
            +VD+  R G  + A  +  S+  R
Sbjct: 509 TLVDMFSRCGDPESAMSIFNSLTNR 533


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/591 (35%), Positives = 353/591 (59%), Gaps = 2/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  YIK      A+ ++  MR +G E +  T+   L  CA       G ++H  A+
Sbjct: 210 WNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAV 269

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+ +  V+N L+ MY++C  L  A  LF+ +P  D+V+W+ MI G  + GL +EAL 
Sbjct: 270 KCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALG 329

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M     RP  V ++S++    D+  +  GK +H  ++RNC    +   + +AL+D+
Sbjct: 330 LFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCV--HMDAFLVSALVDI 387

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC ++  A+ L++      VV  + +ISGY+      + +++F  ++E+ + P+ +T+
Sbjct: 388 YFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTV 447

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  L LG+ +H Y+LRN +E    + +AL+DMY KC  +  +  +F  M  
Sbjct: 448 ASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSL 507

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN++IS+++Q     +A +LF  M +  ++ N VT+   LS C    A+  GK +
Sbjct: 508 KDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEI 567

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I K  ++ D+  ++AL+DMYAKCG++  A R+F     ++   WN++++ YG HG  
Sbjct: 568 HGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLV 627

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +E++ F   M+  G KP+ +TF+ L++AC+HAGLV EG  +F  M     + P++EH+ C
Sbjct: 628 KESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFAC 687

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDL  R+G LD+A + I  MP +P+  +WGALL A ++H+N  + +IA+ ++ +++P N
Sbjct: 688 MVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPGN 747

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            GY VLMSNI AVA RW+ V+ VRR+MK+ ++ K PG+S V+VN   H F+
Sbjct: 748 SGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFV 798



 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 169/522 (32%), Positives = 285/522 (54%), Gaps = 6/522 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFM--RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGF 96
           +N L+  +      S A+  Y  M         D  T+P ++K+CA +    LG+ +H  
Sbjct: 107 WNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRT 166

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
           A   GL  D YV +ALI+MYS+ G L  AR  FD MP RD V W+ M+ GY + G    A
Sbjct: 167 ARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGA 226

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           + + R MR     P+   +   +S+ A  AD+  G  +H+  V+ C  E+  VA+A  L+
Sbjct: 227 VRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVK-CGLEQ-EVAVANTLL 284

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
            MY+KC  L  A +LF  L ++ +V+W  MISG ++   ++E + LF +M+     P  +
Sbjct: 285 SMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSV 344

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T++SL+     + GL+ GK +H YI+RN       + +ALVD+Y KCR++R+AR L+D  
Sbjct: 345 TLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAA 404

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           ++ DV+I + VIS Y      +KA ++F ++    ++PN VT+  +L  C    AL +G+
Sbjct: 405 RAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQ 464

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H Y+ +   E    +++AL+DMYAKCG ++ ++ +FS+   +D   WN+M++ +  +G
Sbjct: 465 EIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNG 524

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             +EAL  F  M   G+K N +T    L+AC+    +  GK +   ++ G  +   I   
Sbjct: 525 EPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKG-PIKADIFAE 583

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             ++D+  + G ++ A  + + MP + N + W ++++A   H
Sbjct: 584 SALIDMYAKCGNMELALRVFEFMPDK-NEVSWNSIISAYGAH 624



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 237/425 (55%), Gaps = 6/425 (1%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           + L  +N +++  ++N     AL ++  M ++G+  D+ T+ ++L A   +     GKE+
Sbjct: 306 DDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEV 365

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG+ I+N +  DA++ +AL+ +Y +C  + +AR L+D     DVV  ST+I GY   G+ 
Sbjct: 366 HGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMS 425

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           E+AL++ R +    I+P+ V + S++   A ++ + LG+ IH  V+RN  + K    + +
Sbjct: 426 EKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGK--CYVES 483

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMY+KCG L  +  +F++++    V+W  MIS + +  E  E + LF +M  E +  
Sbjct: 484 ALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKY 543

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           + +TI S +  C  +  +  GK +H  I++   +  +   +AL+DMY KC  +  A  +F
Sbjct: 544 NNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVF 603

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH-MKVSKVRPNEVTMVGLLSLCTEAGAL 392
           + M  K+ + WN++ISAY  AH + K    F+H M+    +P+ VT + L+S C  AG +
Sbjct: 604 EFMPDKNEVSWNSIISAYG-AHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLV 662

Query: 393 EMGKWLHTYIEKQGLEVDVILKTA-LVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMA 450
           E G  L   + K+ L    +   A +VD+Y++ G ++ A +  ++  ++ D  +W A++ 
Sbjct: 663 EEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLH 722

Query: 451 GYGMH 455
              +H
Sbjct: 723 ACRVH 727



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 146/500 (29%), Positives = 238/500 (47%), Gaps = 24/500 (4%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNG-LDGDAYVS--NALIQMYSECGSLVSARYLFDEM 132
            +L+ C       LG +IH  A+ +G L    +++    L+ MY        A  +F  +
Sbjct: 37  ALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDAVAVFSAL 96

Query: 133 PNR---DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA--MISMVSLFADVAD 187
           P       + W+ +IRG+   G    A+    +M      PS  A  +  +V   A +  
Sbjct: 97  PRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKSCAALGA 156

Query: 188 VDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           V LG+ +H    R  +   L   V + +ALI MYS  G L  A+  F+ +     V W V
Sbjct: 157 VSLGRLVH----RTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNV 212

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
           M+ GYI+  ++   VRLF  M      P+  T+   +  C     L  G  LH+  ++ G
Sbjct: 213 MMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCG 272

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
            E  +A+AN L+ MY KCR +  A  LF+ +   D++ WN +IS   Q   +D+A  LF 
Sbjct: 273 LEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFC 332

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            M  S  RP+ VT+V LL   T+   L+ GK +H YI +  + +D  L +ALVD+Y KC 
Sbjct: 333 DMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCR 392

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
           DV  A  L+  A   D+ + + +++GY ++G  E+AL  F  +    +KPN +T   +L 
Sbjct: 393 DVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLP 452

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIKSMPL 541
           AC+    +  G+      +HG  L    E        ++D+  + G LD +H +   M L
Sbjct: 453 ACASISALPLGQE-----IHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSL 507

Query: 542 RPNMIVWGALLAASKLHKNP 561
           + + + W +++++   +  P
Sbjct: 508 K-DEVTWNSMISSFSQNGEP 526


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 220/579 (37%), Positives = 341/579 (58%), Gaps = 3/579 (0%)

Query: 54  SALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALI 113
           +AL  +  M   G+     T  ++LK CA       G+ +H      G+D +A  + AL 
Sbjct: 42  AALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALA 101

Query: 114 QMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSE 172
            MY++C     AR +FD MP RD V+W+ ++ GY R GL   A+E++  M+  +  RP  
Sbjct: 102 NMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDS 161

Query: 173 VAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLF 232
           + ++S++   A+   +   +  HA  +R+  +E   V +ATA++D Y KCG++  A+ +F
Sbjct: 162 ITLVSVLPACANARALAACREAHAFAIRSGLEEL--VNVATAILDAYCKCGDIRAARVVF 219

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
           + +   + VSW  MI GY +  +  E + LF  M+EE V  +++++L+ +  CG +G L 
Sbjct: 220 DWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLD 279

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
            G  +H  ++R G + ++++ NAL+ MY KC+ +  A  +FD +  +  + WNA+I   A
Sbjct: 280 EGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCA 339

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
           Q  C + A  LF  M++  V+P+  T+V ++    +       +W+H Y  +  L+ DV 
Sbjct: 340 QNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVY 399

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           + TAL+DMYAKCG VN A  LF+ A  R +  WNAM+ GYG HG G+ A+  F +M+  G
Sbjct: 400 VLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIG 459

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
           + PN  TF+ +L+ACSHAGLV EG+  F  M    GL P +EHYG MVDLLGRAG LDEA
Sbjct: 460 IVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEA 519

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVA 592
              I+ MP+ P + V+GA+L A KLHKN  + E +A +I E+ PQ   Y+VL++NIYA A
Sbjct: 520 WAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANA 579

Query: 593 NRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           + W DVA VR  M++  ++K PG+S +++   +H F  G
Sbjct: 580 SMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSG 618



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 185/373 (49%), Gaps = 7/373 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y +N     AL ++  M + G +V + ++   L+AC ++     G  +H   +
Sbjct: 230 WNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLV 289

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + GLD +  V NALI MYS+C  +  A ++FDE+  R  VSW+ MI G  + G  E+A+ 
Sbjct: 290 RIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVR 349

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M+  +++P    ++S++   AD++D    + IH   +R   D+   V + TALIDM
Sbjct: 350 LFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQD--VYVLTALIDM 407

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG +  A+ LFN   +  V++W  MI GY         V LF EM    + P+E T 
Sbjct: 408 YAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTF 467

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           LS++  C   G +  G+     +  + G E  +     +VD+ G+  ++  A      M 
Sbjct: 468 LSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKMP 527

Query: 338 -SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE-VTMVGLLSLCTEAGALEMG 395
               + ++ A++ A      ++ A E     K+ ++ P E V  V L ++   A   +  
Sbjct: 528 MDPGLSVYGAMLGACKLHKNVELAEE--SAQKIFELGPQEGVYHVLLANIYANASMWKDV 585

Query: 396 KWLHTYIEKQGLE 408
             + T +EK GL+
Sbjct: 586 ARVRTAMEKNGLQ 598


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/610 (35%), Positives = 348/610 (57%), Gaps = 5/610 (0%)

Query: 24  HFKFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKAC 81
           H +  +  +  P L  +N L+  +  N  P S++ +Y  +RK  +   DNFT    + A 
Sbjct: 64  HVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAA 123

Query: 82  AQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWS 141
           +++    +G  +H  +I +G+  + +V +A++ +Y +      AR +FD MP RD V W+
Sbjct: 124 SRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWN 183

Query: 142 TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN 201
           TMI G+ R    E+++ V  +M  + +      + ++++  A++ +  LG  I     + 
Sbjct: 184 TMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASK- 242

Query: 202 CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVR 261
            K     V + T LI +YSKCG     + LF++++Q  ++S+  MISGY   +E    V 
Sbjct: 243 -KGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVT 301

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           LF E++      +  T++ LI        LQL + +    L+ G     +++ AL  +Y 
Sbjct: 302 LFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYC 361

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           +  E++ AR LFD    K +  WNA+IS Y Q    D+A  LF  M + ++ PN VT+  
Sbjct: 362 RLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTS 420

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           +LS C + GAL +GKW+H  I+ + LE +V + TALVDMYAKCG +  A +LF   + ++
Sbjct: 421 ILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKN 480

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           +  WNAM+ GYG+HG G+EAL  F +M +SG+ P G+TF+ +L ACSH+GLV+EG  +F 
Sbjct: 481 VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFH 540

Query: 502 KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
            M +  G  P  EHY CMVD+LGRAG L  A E I+ MPL P   VWGALL A  +HKN 
Sbjct: 541 SMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 600

Query: 562 SMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
            M  +A+ ++ +++P+N GY VL+SNIY+    +   A VR+V+K+ ++ K PG + +E+
Sbjct: 601 EMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 660

Query: 622 NGLVHKFIRG 631
           +   + F  G
Sbjct: 661 DDQQYVFTSG 670



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 231/476 (48%), Gaps = 22/476 (4%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           +I    I +G+  D      L   + + G++   R LF+++   D+  ++ +IRG+   G
Sbjct: 32  QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNG 91

Query: 152 LPEEALEVMREMR-FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           LP+ ++ +   +R   ++RP        +S  + + D  +G  +HA  + +      GVA
Sbjct: 92  LPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVD------GVA 145

Query: 211 ----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
               + +A++D+Y K      A+++F+ + +   V W  MISG+ R +   + +R+F +M
Sbjct: 146 SNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDM 205

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
           ++  +     T+ +++     +   +LG  +     + G    + +   L+ +Y KC + 
Sbjct: 206 LDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKS 265

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
              R LFD +   D++ +NA+IS Y   H  + A  LF  +  S  R N  T+VGL+ + 
Sbjct: 266 CKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVY 325

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
                L++ + +     K G+ +   + TAL  +Y +  +V  A +LF E+  + +  WN
Sbjct: 326 LPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWN 385

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           AM++GY  +G  + A+  F +M    + PN +T   +L+AC+  G ++ G     K VHG
Sbjct: 386 AMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALSIG-----KWVHG 439

Query: 507 LGLVPKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           L    ++E        +VD+  + G + EA ++   M +  N++ W A++    LH
Sbjct: 440 LIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNAMITGYGLH 494


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 222/619 (35%), Positives = 350/619 (56%), Gaps = 47/619 (7%)

Query: 51  KPSSALNIYAFMRKNGSEVDNFTIPT-----ILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
           KP     I A      S + +F+ PT     +L+ C    M  L +++H  AIK GL+ +
Sbjct: 18  KPKQMTTIAA----TSSALKSFSPPTHPLISLLETCES--MDQL-QQVHCQAIKKGLNAN 70

Query: 106 AYVSNALIQM--YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
             + N ++      E G    AR LFDE+P  ++  W+TMIRGY R   P+  + +  EM
Sbjct: 71  PVLQNRVMTFCCTHEYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEM 130

Query: 164 RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCG 223
               ++P       +   F     ++ G+ +H  V+++    +  V + TAL+ MY  CG
Sbjct: 131 LRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKH--GLQYNVFVHTALVQMYLLCG 188

Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLII 283
            L  A+ +F+   +  V++W ++IS Y +  +  E  RLF  M ++ V P+ +T++ ++ 
Sbjct: 189 QLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLS 248

Query: 284 ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA-------------- 329
            C  +  L+ GK +H+Y+     E +L + NA++DMY  C E+ SA              
Sbjct: 249 ACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIIS 308

Query: 330 -----------------RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
                            R  FD M  KD + W A+I  Y +++   +A ELF +M+ + V
Sbjct: 309 WTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNV 368

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR 432
           +P+E TMV +L+ C   GALE+G+W+ TYI++  ++ D+ ++ AL+DMY KCGDV+ A  
Sbjct: 369 KPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAES 428

Query: 433 LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL 492
           +F E   RD   W AM+ G  ++G GE+AL  F +M ++ + P+ IT+IG+L+AC+H GL
Sbjct: 429 IFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGL 488

Query: 493 VTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           V +G+  F +M    G+ P I HYGC+VDLL RAG L EA+E+I++MP++ N IVWGALL
Sbjct: 489 VDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALL 548

Query: 553 AASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKK 612
           A  ++++   M E+   QILE+EP N    VL+ NIYA   RWND+  +R++M +  +KK
Sbjct: 549 AGCRVYRESDMAEMVVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKK 608

Query: 613 EPGFSSVEVNGLVHKFIRG 631
            PG S +E+NG VH+F+ G
Sbjct: 609 XPGCSLIEMNGRVHEFVAG 627



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 161/571 (28%), Positives = 282/571 (49%), Gaps = 60/571 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y + + P   +++Y  M + G + D +T P + K   + +    G+++HG  +
Sbjct: 107 WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVL 166

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+GL  + +V  AL+QMY  CG L +AR +FD  P  DV++W+ +I  Y++ G  EE+  
Sbjct: 167 KHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRR 226

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M    + P+ V ++ ++S  + + D+  GK +H+  V+NCK E   + +  A+IDM
Sbjct: 227 LFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHS-YVKNCKVES-NLVLENAMIDM 284

Query: 219 YSKCGNL-------------------------------AYAKQLFNRLNQNSVVSWTVMI 247
           Y+ CG +                                 A+  F+++ +   VSWT MI
Sbjct: 285 YADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMI 344

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
            GYIR N   E + LF  M   NV P E T++S++  C  +G L+LG+W+  YI RN  +
Sbjct: 345 DGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIK 404

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             L + NAL+DMY KC ++  A ++F  M  +D   W A+I   A     +KA ++F +M
Sbjct: 405 NDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNM 464

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
             + + P+E+T +G+LS CT  G ++ G K+      + G+E ++     LVD+ A+ G 
Sbjct: 465 LKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGR 524

Query: 427 VNGAYRLFSE-AIYRDICMWNAMMAG---YGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
           +  AY +     I  +  +W A++AG   Y      E  +   +++E      NG  ++ 
Sbjct: 525 LKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPD----NGAVYVL 580

Query: 483 LLN---ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC-MVDLLGRAGLL---DEAHEM 535
           L N   AC     + E + +   M  G+   P     GC ++++ GR       D +H  
Sbjct: 581 LCNIYAACKRWNDLRELRQMM--MDKGIKKXP-----GCSLIEMNGRVHEFVAGDRSHPQ 633

Query: 536 IKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
            K++  + + +     LA      +P + E+
Sbjct: 634 TKNIDAKLDKMTQDLKLAGY----SPDISEV 660



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 187/401 (46%), Gaps = 65/401 (16%)

Query: 10  LEQTRQCHAHIIKTHFK---FSYTNIIN---------------------PLTRYNSLVTS 45
           LE  RQ H H++K   +   F +T ++                       +  +N ++++
Sbjct: 155 LEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISA 214

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
           Y K  K   +  ++  M          T+  +L AC+++     GK++H +     ++ +
Sbjct: 215 YNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESN 274

Query: 106 AYVSNALIQMYSECGSLVS-------------------------------ARYLFDEMPN 134
             + NA+I MY++CG + S                               AR  FD+MP 
Sbjct: 275 LVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPE 334

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           +D VSW+ MI GY R    +EALE+ R M+  +++P E  M+S+++  A +  ++LG+ I
Sbjct: 335 KDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWI 394

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
              + RN    K  + +  ALIDMY KCG++  A+ +F  ++Q    +WT MI G     
Sbjct: 395 RTYIDRN--KIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNG 452

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR----NGFEFSL 310
              + + +F+ M++ ++ P EIT + ++  C   G +  G+    Y LR    +G E ++
Sbjct: 453 HGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGR---KYFLRMTSQHGIEPNI 509

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISA 350
           A    LVD+  +   ++ A  + + M  K + ++W A+++ 
Sbjct: 510 AHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAG 550


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 210/591 (35%), Positives = 351/591 (59%), Gaps = 2/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++   IK      A+ ++  MR +G E +  T+   L  CA       G ++H  A+
Sbjct: 210 WNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAV 269

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+ +  V+N L+ MY++C  L  A  LF+ MP  D+V+W+ MI G  + GL  EA  
Sbjct: 270 KCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFG 329

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+    RP  + ++S++    D+  +  GK +H  +VRNC +  + V + +AL+D+
Sbjct: 330 LFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVN--MDVFLVSALVDI 387

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC ++  A+ L++      VV  + MISGY+      E +++F  ++E+ + P+ +TI
Sbjct: 388 YFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTI 447

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  L LG+ +H Y+LRN +E    + +AL+DMY KC  +  +  +F  M  
Sbjct: 448 ASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQ 507

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN++IS+++Q     +A +LF  M +  ++ N +T+   LS C    A+  GK +
Sbjct: 508 KDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEI 567

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    K  ++ D+  ++AL+DMYAKCG++  A R+F     ++   WN++++ YG HG  
Sbjct: 568 HGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLV 627

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +E++     M+  G KP+ +TF+ L++AC+HAGLV EG  +F  M     + P++EH+ C
Sbjct: 628 KESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFAC 687

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDL  R+G LD+A + I  MP +P+  +WGALL A ++H+N  + +IA+ ++ +++P N
Sbjct: 688 MVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFKLDPAN 747

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            GY VLMSNI AVA RW+ V+ VRR+MK+ ++ K PG+S V+VN   H F+
Sbjct: 748 SGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVNNSSHLFV 798



 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 158/489 (32%), Positives = 269/489 (55%), Gaps = 4/489 (0%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF 129
           D  T+P ++K+CA +    LG+ +H  A   GL  D YV +AL++MY++ G L +AR  F
Sbjct: 140 DAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAF 199

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           D +P RD V W+ M+ G  + G  + A+ + R MR     P+   +   +S+ A  AD+ 
Sbjct: 200 DGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLL 259

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
            G  +H+  V+ C  E   VA+A  L+ MY+KC  L  A +LF  + Q+ +V+W  MISG
Sbjct: 260 SGAQLHSLAVK-CGLEP-EVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISG 317

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
            ++     E   LF +M      P  IT++SL+     + GL+ GK +H YI+RN     
Sbjct: 318 CVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMD 377

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           + + +ALVD+Y KCR++R A+ L+D  ++ DV+I + +IS Y      ++A ++F ++  
Sbjct: 378 VFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLE 437

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
             ++PN VT+  +L  C    AL +G+ +H Y+ +   E    +++AL+DMYAKCG ++ 
Sbjct: 438 QCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDL 497

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           ++ +F +   +D   WN+M++ +  +G  +EAL  F  M   G+K N IT    L+AC+ 
Sbjct: 498 SHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACAS 557

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
              +  GK +    + G  +   I     ++D+  + G L+ A  + + MP + N + W 
Sbjct: 558 LPAIYYGKEIHGVTIKG-PIKADIFAESALIDMYAKCGNLELALRVFEFMPDK-NEVSWN 615

Query: 550 ALLAASKLH 558
           ++++A   H
Sbjct: 616 SIISAYGAH 624



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 232/424 (54%), Gaps = 4/424 (0%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           + L  +N +++  ++N     A  ++  M+++G+  D+ T+ ++L A   +     GKE+
Sbjct: 306 DDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEV 365

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG+ ++N ++ D ++ +AL+ +Y +C  +  A+ L+D     DVV  STMI GY   G+ 
Sbjct: 366 HGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMS 425

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           EEAL++ R +    I+P+ V + S++   A +A + LG+ IH  V+RN  + K    + +
Sbjct: 426 EEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERK--CYVES 483

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMY+KCG L  +  +F +++Q   V+W  MIS + +  +  E + LF +M  E +  
Sbjct: 484 ALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKY 543

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           + ITI + +  C  +  +  GK +H   ++   +  +   +AL+DMY KC  +  A  +F
Sbjct: 544 NNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVF 603

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + M  K+ + WN++ISAY     + ++  L   M+    +P+ VT + L+S C  AG +E
Sbjct: 604 EFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVE 663

Query: 394 MGKWLHTYIEKQGLEVDVILKTA-LVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAG 451
            G  L   + K+ L    +   A +VD+Y++ G ++ A +  ++  ++ D  +W A++  
Sbjct: 664 EGVQLFQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHA 723

Query: 452 YGMH 455
             +H
Sbjct: 724 CRVH 727



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 236/500 (47%), Gaps = 24/500 (4%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGD---AYVSNALIQMYSECGSLVSARYLFDEM 132
            +L+ C       LG +IH  A+ +G   D     +   L+ MY        A  +F  +
Sbjct: 37  AVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDAVAVFSAL 96

Query: 133 PNRDVVS---WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA--MISMVSLFADVAD 187
           P     S   W+ +IRG+   G    A+    +M      PS  A  +  +V   A +  
Sbjct: 97  PRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKSCAALGA 156

Query: 188 VDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           + LG+ +H    R  +   L   V + +AL+ MY+  G L  A+  F+ + +   V W V
Sbjct: 157 MSLGRLVH----RTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNV 212

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
           M+ G I+  +++  VRLF  M      P+  T+   +  C     L  G  LH+  ++ G
Sbjct: 213 MMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCG 272

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
            E  +A+AN L+ MY KC+ +  A  LF+ M   D++ WN +IS   Q     +AF LF 
Sbjct: 273 LEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFY 332

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            M+ S  RP+ +T+V LL   T+   L+ GK +H YI +  + +DV L +ALVD+Y KC 
Sbjct: 333 DMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCR 392

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
           DV  A  L+  A   D+ + + M++GY ++G  EEAL  F  +    +KPN +T   +L 
Sbjct: 393 DVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLP 452

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIKSMPL 541
            C+    +  G+      +HG  L    E        ++D+  + G LD +H +   M  
Sbjct: 453 GCASMAALPLGQQ-----IHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQ 507

Query: 542 RPNMIVWGALLAASKLHKNP 561
           + + + W +++++   +  P
Sbjct: 508 K-DEVTWNSMISSFSQNGKP 526


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 218/606 (35%), Positives = 354/606 (58%), Gaps = 14/606 (2%)

Query: 36  LTRYNSLVTSYI-----KNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           L  +N+++ +Y       +      L+++  +R +       T+  +LK C         
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           + +HG+AIK GL+ D +VS AL+ +YS+CG +  AR LFD M  RDVV W+ M++GY + 
Sbjct: 203 EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 262

Query: 151 GLPEEALEVMREMRFMDIRPSE--VAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           GL +EA ++  E     +RP E  V +I    L+A   D++LGK +H   V++  D    
Sbjct: 263 GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSD-- 320

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V++A +L++MYSK G   +A+++FN +    ++SW  MIS   + +   E V LF +++ 
Sbjct: 321 VSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLH 380

Query: 269 ENVFPSEITILSLIIE-----CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
           E + P   T+ S+ +      CG +  L  GK +HA+ ++ GF+  L + + ++DMY KC
Sbjct: 381 EGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKC 440

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
            ++ +A  +F+ + + D + W ++IS        D+A  ++  M+ S+V P+E T   L+
Sbjct: 441 GDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLI 500

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
              +   ALE G+ LH  + K     D  + T+LVDMYAKCG++  AYRLF +   R+I 
Sbjct: 501 KASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIA 560

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
           +WNAM+ G   HG  EEA+  F  M+  G++P+ ++FIG+L+ACSHAGL +E       M
Sbjct: 561 LWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSM 620

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
            +  G+ P+IEHY C+VD LGRAGL+ EA ++I++MP + +  +  ALL A ++  +   
Sbjct: 621 PNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVET 680

Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
           G+  A ++  +EP +    VL+SNIYA ANRW+DV   R++MK   VKK+PGFS ++V  
Sbjct: 681 GKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKN 740

Query: 624 LVHKFI 629
           ++H F+
Sbjct: 741 MLHLFV 746



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 261/489 (53%), Gaps = 26/489 (5%)

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY- 147
           LGK  H   + +G  GD ++SN L+ MYS+CGSL SAR +FD  P RD+V+W+ ++  Y 
Sbjct: 95  LGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYA 154

Query: 148 ----HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
                  G  +E L + R +R      + + +  ++ L  +   +   + +H   +    
Sbjct: 155 ASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAI---- 210

Query: 204 DEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
             K+G    V ++ AL+++YSKCG +  A+ LF+ + +  VV W +M+ GY++     E 
Sbjct: 211 --KIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEA 268

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVG--GLQLGKWLHAYILRNGFEFSLAMANALV 317
            +LF+E     + P E ++  ++  C + G   L+LGK +H   +++G +  +++AN+LV
Sbjct: 269 FQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDVSVANSLV 328

Query: 318 DMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEV 377
           +MY K      AR +F+ MK  D++ WN++IS+ AQ+   +++  LFI +    ++P+  
Sbjct: 329 NMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHF 388

Query: 378 TMVGLLSLCTEAGA------LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           T+   ++L T A A      L+ GK +H +  K G + D+ + + ++DMY KCGD+  A 
Sbjct: 389 TLAS-ITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAG 447

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
            +F+     D   W +M++G   +G  ++AL  +  M +S V P+  TF  L+ A S   
Sbjct: 448 IVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVT 507

Query: 492 LVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
            + +G+ +   ++  L  V        +VD+  + G +++A+ + K M +R N+ +W A+
Sbjct: 508 ALEQGRQLHANVIK-LDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVR-NIALWNAM 565

Query: 552 LAASKLHKN 560
           L     H N
Sbjct: 566 LVGLAQHGN 574



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 139/275 (50%), Gaps = 17/275 (6%)

Query: 291 LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
           L LGK  HA I+ +G      ++N L+ MY KC  + SAR +FD    +D++ WNA++ A
Sbjct: 93  LLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGA 152

Query: 351 YAQAHCID-------KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           YA +  +D       +   LF  ++ S      +T+  +L LC  +G L   + +H Y  
Sbjct: 153 YAAS--VDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAI 210

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
           K GLE DV +  ALV++Y+KCG +  A  LF     RD+ +WN M+ GY   G  +EA  
Sbjct: 211 KIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQ 270

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLVPKIEHYGCM 519
            F +  RSG++P+  +   +LN C  AG          K VHG+    GL   +     +
Sbjct: 271 LFSEFHRSGLRPDEFSVQLILNGCLWAG---TDDLELGKQVHGIAVKSGLDSDVSVANSL 327

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           V++  + G    A E+   M    ++I W +++++
Sbjct: 328 VNMYSKMGCAYFAREVFNDMK-HLDLISWNSMISS 361



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 26/196 (13%)

Query: 10  LEQTRQCHAHIIKTHFK-------------------------FSYTNIINPLTRYNSLVT 44
           L+Q +Q HAH IK  F                          F+Y +  + +  + S+++
Sbjct: 408 LDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVA-WTSMIS 466

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
             + N     AL IY  MR++    D +T  T++KA + V     G+++H   IK     
Sbjct: 467 GCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVS 526

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           D +V  +L+ MY++CG++  A  LF +M  R++  W+ M+ G  + G  EEA+ + + M+
Sbjct: 527 DPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMK 586

Query: 165 FMDIRPSEVAMISMVS 180
              I P  V+ I ++S
Sbjct: 587 SHGIEPDRVSFIGILS 602



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 7/176 (3%)

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           LL        L +GK  H  I   G   D  L   L+ MY+KCG ++ A ++F     RD
Sbjct: 83  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142

Query: 442 ICMWNAMMAGYGM-----HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
           +  WNA++  Y        G  +E L  F  +  S      +T   +L  C ++G +   
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 202

Query: 497 KSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           + V    +  +GL   +   G +V++  + G + +A  +   M  R ++++W  +L
Sbjct: 203 EGVHGYAIK-IGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRER-DVVLWNMML 256


>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
           mitochondrial-like [Glycine max]
          Length = 601

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/594 (35%), Positives = 355/594 (59%), Gaps = 6/594 (1%)

Query: 30  TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL 89
           T +    +  ++ + S++        L +++ +   G    +F +P+++KA +       
Sbjct: 10  TTVAPTCSSPSNQIKSFLSKGLYHQTLQLFSELHLCGHSSISFFLPSVIKASSSAQCHTF 69

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G ++H  A+K G   +  VSN++I MY +   + SAR +FD MP+RD ++W+++I GY  
Sbjct: 70  GTQLHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLH 129

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
            G  EEALE + ++  + + P    + S+VS+        +G+ IHA VV N   E++G 
Sbjct: 130 NGYLEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVN---ERIGQ 186

Query: 210 A--IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
           +  ++TAL+D Y +CG+   A ++F+ +   +VVSWT MISG I   + +E    F  M 
Sbjct: 187 SMFLSTALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQ 246

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE-I 326
            E V P+ +T ++L+  C   G ++ GK +H Y  R+GFE   + ++ALV+MY +C E +
Sbjct: 247 AEGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALVNMYCQCGEPM 306

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             A  +F+G   +DV++W+++I ++++     KA +LF  M+  ++ PN VT++ ++S C
Sbjct: 307 HLAELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISAC 366

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
           T   +L+ G  LH YI K G    + +  AL++MYAKCG +NG+ ++F E   RD   W+
Sbjct: 367 TNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVTWS 426

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           ++++ YG+HGCGE+AL  F +M   GVKP+ ITF+ +L+AC+HAGLV EG+ +F ++   
Sbjct: 427 SLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQVRAD 486

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
             +   IEHY C+VDLLGR+G L+ A E+ ++MP++P+  +W +L++A KLH    + E+
Sbjct: 487 CEIPLTIEHYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHGRLDIAEM 546

Query: 567 AATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
            A Q++  EP N G   L++ IYA    W D   VR  MK  ++KK  GFS +E
Sbjct: 547 LAPQLIRSEPNNAGNYTLLNTIYAEHGHWLDTEQVREAMKLQKLKKCYGFSRIE 600


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  418 bits (1074), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 219/610 (35%), Positives = 348/610 (57%), Gaps = 5/610 (0%)

Query: 24  HFKFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKAC 81
           H +  +  +  P L  +N L+  +  N  P S++ +Y  +RK  +   DNFT    + A 
Sbjct: 64  HVRQLFNKVSKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAA 123

Query: 82  AQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWS 141
           +++    +G  +H  +I +G+  + +V +A++ +Y +      AR +FD MP RD V W+
Sbjct: 124 SRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWN 183

Query: 142 TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN 201
           TMI G+ R    E+++ V  +M  + +      + ++++  A++ +  LG  I     + 
Sbjct: 184 TMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASK- 242

Query: 202 CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVR 261
            K     V + T LI +YSKCG     + LF++++Q  ++S+  MISGY   +E    V 
Sbjct: 243 -KGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVT 301

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           LF E++      +  T++ LI        LQL + +    L+ G     +++ AL  +Y 
Sbjct: 302 LFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYC 361

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           +  E++ AR LFD    K +  WNA+IS Y Q    D+A  LF  M + ++ PN VT+  
Sbjct: 362 RLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTS 420

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           +LS C + GAL +GKW+H  I+ + LE +V + TALVDMYAKCG +  A +LF   + ++
Sbjct: 421 ILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKN 480

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           +  WNAM+ GYG+HG G+EAL  F +M +SG+ P G+TF+ +L ACSH+GLV+EG  +F 
Sbjct: 481 VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFH 540

Query: 502 KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
            M +  G  P  EHY CMVD+LGRAG L  A E I+ MPL P   VWGALL A  +HKN 
Sbjct: 541 SMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 600

Query: 562 SMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
            M  +A+ ++ +++P+N GY VL+SNIY+    +   A VR+V+K+ ++ K PG + +E+
Sbjct: 601 EMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 660

Query: 622 NGLVHKFIRG 631
           +   + F  G
Sbjct: 661 DDQQYVFTSG 670



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 231/476 (48%), Gaps = 22/476 (4%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           +I    I +G+  D      L   + + G++   R LF+++   D+  ++ +IRG+   G
Sbjct: 32  QIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDLFLFNVLIRGFSDNG 91

Query: 152 LPEEALEVMREMR-FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           LP+ ++ +   +R   ++RP        +S  + + D  +G  +HA  + +      GVA
Sbjct: 92  LPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAHSIVD------GVA 145

Query: 211 ----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
               + +A++D+Y K      A+++F+ + +   V W  MISG+ R +   + +R+F +M
Sbjct: 146 SNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDM 205

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
           ++  +     T+ +++     +   +LG  +     + G    + +   L+ +Y KC + 
Sbjct: 206 LDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKS 265

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
              R LFD +   D++ +NA+IS Y   H  + A  LF  +  S  R N  T+VGL+ + 
Sbjct: 266 CKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVY 325

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
                L++ + +     K G+ +   + TAL  +Y +  +V  A +LF E+  + +  WN
Sbjct: 326 LPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWN 385

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           AM++GY  +G  + A+  F +M    + PN +T   +L+AC+  G ++ G     K VHG
Sbjct: 386 AMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALSIG-----KWVHG 439

Query: 507 LGLVPKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           L    ++E        +VD+  + G + EA ++   M +  N++ W A++    LH
Sbjct: 440 LIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLM-VDKNVVTWNAMITGYGLH 494


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 218/605 (36%), Positives = 346/605 (57%), Gaps = 43/605 (7%)

Query: 65  NGSEVDNFTIPT-----ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQM--YS 117
             S + +F+ PT     +L+ C    M  L +++H  AIK GL+ +  + N ++      
Sbjct: 7   TSSALKSFSPPTHPLISLLETCES--MDQL-QQVHCQAIKKGLNANPVLQNRVMTFCCTH 63

Query: 118 ECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMIS 177
           E G    AR LFDE+P  ++  W+TMIRGY R   P+  + +  EM    ++P       
Sbjct: 64  EYGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPF 123

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
           +   F     ++ G+ +H  V+++    +  V + TAL+ MY  CG L  A+ +F+   +
Sbjct: 124 LFKGFTRDIALEYGRQLHGHVLKH--GLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPK 181

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
             V++W ++IS Y +  +  E  RLF  M ++ V P+ +T++ ++  C  +  L+ GK +
Sbjct: 182 ADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKV 241

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSA---------------------------- 329
           H+Y+     E +L + NA++DMY  C E+ SA                            
Sbjct: 242 HSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEI 301

Query: 330 ---RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
              R  FD M  KD + W A+I  Y +++   +A ELF +M+ + V+P+E TMV +L+ C
Sbjct: 302 DVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTAC 361

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
              GALE+G+W+ TYI++  ++ D+ ++ AL+DMY KCGDV+ A  +F E   RD   W 
Sbjct: 362 AHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWT 421

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           AM+ G  ++G GE+AL  F +M ++ + P+ IT+IG+L+AC+H GLV +G+  F +M   
Sbjct: 422 AMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQ 481

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
            G+ P I HYGC+VDLL RAG L EA+E+I++MP++ N IVWGALLA  ++++   M E+
Sbjct: 482 HGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEM 541

Query: 567 AATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVH 626
              QILE+EP N    VL+ NIYA   RWND+  +R++M +  +KK PG S +E+NG VH
Sbjct: 542 VVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVH 601

Query: 627 KFIRG 631
           +F+ G
Sbjct: 602 EFVAG 606



 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 161/571 (28%), Positives = 282/571 (49%), Gaps = 60/571 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y + + P   +++Y  M + G + D +T P + K   + +    G+++HG  +
Sbjct: 86  WNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVL 145

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+GL  + +V  AL+QMY  CG L +AR +FD  P  DV++W+ +I  Y++ G  EE+  
Sbjct: 146 KHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRR 205

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M    + P+ V ++ ++S  + + D+  GK +H+  V+NCK E   + +  A+IDM
Sbjct: 206 LFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHS-YVKNCKVES-NLVLENAMIDM 263

Query: 219 YSKCGNL-------------------------------AYAKQLFNRLNQNSVVSWTVMI 247
           Y+ CG +                                 A+  F+++ +   VSWT MI
Sbjct: 264 YADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMI 323

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
            GYIR N   E + LF  M   NV P E T++S++  C  +G L+LG+W+  YI RN  +
Sbjct: 324 DGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIK 383

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             L + NAL+DMY KC ++  A ++F  M  +D   W A+I   A     +KA ++F +M
Sbjct: 384 NDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNM 443

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
             + + P+E+T +G+LS CT  G ++ G K+      + G+E ++     LVD+ A+ G 
Sbjct: 444 LKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGR 503

Query: 427 VNGAYRLFSE-AIYRDICMWNAMMAG---YGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
           +  AY +     I  +  +W A++AG   Y      E  +   +++E      NG  ++ 
Sbjct: 504 LKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELE----PDNGAVYVL 559

Query: 483 LLN---ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC-MVDLLGRAGLL---DEAHEM 535
           L N   AC     + E + +   M  G+   P     GC ++++ GR       D +H  
Sbjct: 560 LCNIYAACKRWNDLRELRQMM--MDKGIKKTP-----GCSLIEMNGRVHEFVAGDRSHPQ 612

Query: 536 IKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
            K++  + + +     LA      +P + E+
Sbjct: 613 TKNIDAKLDKMTQDLKLAGY----SPDISEV 639



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 187/401 (46%), Gaps = 65/401 (16%)

Query: 10  LEQTRQCHAHIIKTHFK---FSYTNIIN---------------------PLTRYNSLVTS 45
           LE  RQ H H++K   +   F +T ++                       +  +N ++++
Sbjct: 134 LEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMIISA 193

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
           Y K  K   +  ++  M          T+  +L AC+++     GK++H +     ++ +
Sbjct: 194 YNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESN 253

Query: 106 AYVSNALIQMYSECGSLVS-------------------------------ARYLFDEMPN 134
             + NA+I MY++CG + S                               AR  FD+MP 
Sbjct: 254 LVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPE 313

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           +D VSW+ MI GY R    +EALE+ R M+  +++P E  M+S+++  A +  ++LG+ I
Sbjct: 314 KDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWI 373

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
              + RN    K  + +  ALIDMY KCG++  A+ +F  ++Q    +WT MI G     
Sbjct: 374 RTYIDRN--KIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNG 431

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR----NGFEFSL 310
              + + +F+ M++ ++ P EIT + ++  C   G +  G+    Y LR    +G E ++
Sbjct: 432 HGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGR---KYFLRMTSQHGIEPNI 488

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISA 350
           A    LVD+  +   ++ A  + + M  K + ++W A+++ 
Sbjct: 489 AHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAG 529


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 221/616 (35%), Positives = 358/616 (58%), Gaps = 42/616 (6%)

Query: 55  ALNIYAFMRKNGSEVDN---FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNA 111
           AL++ +   +N S ++N   F    IL    +   +   KE+H   ++ GL  D + ++ 
Sbjct: 3   ALSVPSISLQNFSTLNNNLLFRNHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASK 62

Query: 112 LI--QMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM--RFMD 167
           L      S   +L  AR LFD++P  ++ +W+T+IR Y     P ++  +  ++  +  D
Sbjct: 63  LFTASALSSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCED 122

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
           + P++     ++   +++    +G A+H   ++      + + I  +L+  Y  CG+L+ 
Sbjct: 123 L-PNKFTFPFVIKAASELKASRVGTAVHGMAIK--LSFGMDLYILNSLVRFYGACGDLSM 179

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A++LF  ++   VVSW  MIS + + N   + + LF +M  ENV P+ +T++ ++  C  
Sbjct: 180 AERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAK 239

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM----- 342
              L+ G+W+ +YI R G +  L + NA++DMY KC  +  A+ LFD M  +DV      
Sbjct: 240 KLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIM 299

Query: 343 --------------------------IWNAVISAYAQAHCIDKAFELFIHMKVSKV-RPN 375
                                      WN +ISAY Q     +A  +F  +++SK+ +P+
Sbjct: 300 LDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPD 359

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
           EVT+V  LS C + GA+++G W+H YI+++G+ ++  L ++LVDMYAKCG +  A  +F 
Sbjct: 360 EVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFY 419

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
               RD+ +W+AM+AG GMHG G+ A+  F +M+ + VKPN +TF  +L ACSHAGLV E
Sbjct: 420 SVEERDVYVWSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDE 479

Query: 496 GKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAAS 555
           G+  F +M    G+VP+++HY CMVD+LGRAG L+EA E+I  M   P+  VWGALL A 
Sbjct: 480 GRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGAC 539

Query: 556 KLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPG 615
            LH N  +GE+A+ Q+L++EP+N+G  VL+SNIYA   RW  V+ +R++M++  +KKEPG
Sbjct: 540 SLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPG 599

Query: 616 FSSVEVNGLVHKFIRG 631
            SS+E NG VH+F+ G
Sbjct: 600 CSSIEANGNVHEFLVG 615



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 168/346 (48%), Gaps = 36/346 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++++ + N P  AL ++  M +     ++ T+  +L ACA+ L    G+ +  +  
Sbjct: 195 WNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIE 254

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG------------ 146
           + G+  D  + NA++ MY++CGS+  A+ LFDEMP RDV SW+ M+ G            
Sbjct: 255 RKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARL 314

Query: 147 -------------------YHRGGLPEEALEVMREMRFMDI-RPSEVAMISMVSLFADVA 186
                              Y + G P+EAL +  E++   I +P EV ++S +S  A + 
Sbjct: 315 VFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLG 374

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
            +DLG  IH  + R  +   L   + ++L+DMY+KCG+L  A ++F  + +  V  W+ M
Sbjct: 375 AIDLGGWIHVYIKR--EGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAM 432

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK-WLHAYILRNG 305
           I+G          + LF EM E  V P+ +T  +++  C   G +  G+ + H      G
Sbjct: 433 IAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYG 492

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
               +     +VD+ G+   +  A  L + M  +    +W A++ A
Sbjct: 493 VVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGA 538


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 213/594 (35%), Positives = 340/594 (57%), Gaps = 2/594 (0%)

Query: 36   LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
            L  +N+++  Y +      A+ +Y  M+  G +    T   +L AC        GK IH 
Sbjct: 451  LISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHE 510

Query: 96   FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              +++G+  + +++NAL+ MY  CGS++ A+ +F+    RD++SW++MI G+ + G  E 
Sbjct: 511  DILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEA 570

Query: 156  ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            A ++  EM+   + P ++   S++    +   ++LG+ IH  ++ +    +L V +  AL
Sbjct: 571  AYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIES--GLQLDVNLGNAL 628

Query: 216  IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
            I+MY +CG+L  A ++F+ L   +V+SWT MI G+    E  +   LF +M  +   P +
Sbjct: 629  INMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVK 688

Query: 276  ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
             T  S++  C     L  GK + A+IL +G+E    + NAL+  Y K   +  AR +FD 
Sbjct: 689  STFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDK 748

Query: 336  MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
            M ++D+M WN +I+ YAQ      A +    M+   V  N+ + V +L+ C+   ALE G
Sbjct: 749  MPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEG 808

Query: 396  KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
            K +H  I K+ ++ DV +  AL+ MYAKCG +  A  +F     +++  WNAM+  Y  H
Sbjct: 809  KRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQH 868

Query: 456  GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
            G   +AL FF  M++ G+KP+G TF  +L+AC+H+GLV EG  +F  +    GL P IEH
Sbjct: 869  GLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEH 928

Query: 516  YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
            YGC+V LLGRAG   EA  +I  MP  P+  VW  LL A ++H N ++ E AA   L++ 
Sbjct: 929  YGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLN 988

Query: 576  PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
             +N    VL+SN+YA A RW+DVA +RRVM+   ++KEPG S +EV+ ++H+FI
Sbjct: 989  ARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFI 1042



 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 155/518 (29%), Positives = 274/518 (52%), Gaps = 10/518 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+++  Y +       + ++  M   G   D  T   +L A     M   GK IH  A+
Sbjct: 252 YNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAV 311

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             GL+ D  V  AL  M+  CG +  A+   +   +RDVV ++ +I    + G  EEA E
Sbjct: 312 NEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFE 371

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACV--VRNCKDEKLGVAIATALI 216
              +MR   +  +    +S+++  +    +  G+ IH+ +  V +  D    V I  +LI
Sbjct: 372 QYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSD----VQIGNSLI 427

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
            MY++CG+L  A++LFN + +  ++SW  +I+GY R  +  E ++L+ +M  E V P  +
Sbjct: 428 SMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRV 487

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T L L+  C        GK +H  ILR+G + +  +ANAL++MY +C  I  A+ +F+G 
Sbjct: 488 TFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGT 547

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           +++D++ WN++I+ +AQ    + A++LF+ MK   + P+++T   +L  C    ALE+G+
Sbjct: 548 RARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGR 607

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H  I + GL++DV L  AL++MY +CG +  AY +F    +R++  W AM+ G+   G
Sbjct: 608 QIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQG 667

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEH 515
              +A   F  M+  G KP   TF  +L AC  +  + EGK V   +++ G  L   + +
Sbjct: 668 EDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGN 727

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
              ++    ++G + +A ++   MP R +++ W  ++A
Sbjct: 728 --ALISAYSKSGSMTDARKVFDKMPNR-DIMSWNKMIA 762



 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 155/514 (30%), Positives = 265/514 (51%), Gaps = 4/514 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL++ Y +      A  ++  M+  G      T  +IL AC        GK+IH   I
Sbjct: 151 WNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKII 210

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G   D  V N+L+ MY +C  L SAR +F  +  RDVVS++TM+  Y +    EE + 
Sbjct: 211 EAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIG 270

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M    I P +V  I+++  F   + +D GK IH   V    +    + + TAL  M
Sbjct: 271 LFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSD--IRVGTALATM 328

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           + +CG++A AKQ         VV +  +I+   +     E    + +M  + V  +  T 
Sbjct: 329 FVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTY 388

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           LS++  C     L  G+ +H++I   G    + + N+L+ MY +C ++  AR LF+ M  
Sbjct: 389 LSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPK 448

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +D++ WNA+I+ YA+     +A +L+  M+   V+P  VT + LLS CT + A   GK +
Sbjct: 449 RDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMI 508

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I + G++ +  L  AL++MY +CG +  A  +F     RDI  WN+M+AG+  HG  
Sbjct: 509 HEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSY 568

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           E A   F++M++ G++P+ ITF  +L  C +   +  G+ +   ++   GL   +     
Sbjct: 569 EAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIES-GLQLDVNLGNA 627

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           ++++  R G L +A+E+  S+  R N++ W A++
Sbjct: 628 LINMYIRCGSLQDAYEVFHSLRHR-NVMSWTAMI 660



 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 140/494 (28%), Positives = 267/494 (54%), Gaps = 8/494 (1%)

Query: 67  SEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSAR 126
           +E +      +++ C +       K IH   ++ G+  D ++SN LI MY +C S+  A 
Sbjct: 78  TETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAH 137

Query: 127 YLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            +F +MP RDV+SW+++I  Y + G  ++A ++  EM+     PS++  IS+++     A
Sbjct: 138 QVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPA 197

Query: 187 DVDLGKAIHACVVRNC--KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
           +++ GK IH+ ++     +D +    +  +L++MY KC +L  A+Q+F+ + +  VVS+ 
Sbjct: 198 ELEYGKKIHSKIIEAGYQRDPR----VQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYN 253

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
            M+  Y +   + E + LF +M  E + P ++T ++L+        L  GK +H   +  
Sbjct: 254 TMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNE 313

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
           G    + +  AL  M+ +C ++  A+   +    +DV+++NA+I+A AQ    ++AFE +
Sbjct: 314 GLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQY 373

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC 424
             M+   V  N  T + +L+ C+ + AL  G+ +H++I + G   DV +  +L+ MYA+C
Sbjct: 374 YQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARC 433

Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
           GD+  A  LF+    RD+  WNA++AGY       EA+  +  M+  GVKP  +TF+ LL
Sbjct: 434 GDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLL 493

Query: 485 NACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
           +AC+++   ++GK + + ++   G+         ++++  R G + EA  + +    R +
Sbjct: 494 SACTNSSAYSDGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR-D 551

Query: 545 MIVWGALLAASKLH 558
           +I W +++A    H
Sbjct: 552 IISWNSMIAGHAQH 565



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 218/423 (51%), Gaps = 17/423 (4%)

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA---DVDLGK 192
           ++VS   M    HRG   E+     +       RP+E    + V L  +      +   K
Sbjct: 49  NLVSVKVMRDEQHRGSEREDLSNAYQP------RPTETNRAAYVDLVQNCTRKRSLAEAK 102

Query: 193 AIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
            IHA +V    +  +G  + ++  LI+MY KC +++ A Q+F ++ +  V+SW  +IS Y
Sbjct: 103 RIHAQMV----EAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCY 158

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
            +     +  +LF EM      PS+IT +S++  C     L+ GK +H+ I+  G++   
Sbjct: 159 AQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDP 218

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
            + N+L++MYGKC ++ SAR +F G+  +DV+ +N ++  YAQ   +++   LF  M   
Sbjct: 219 RVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSE 278

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
            + P++VT + LL   T    L+ GK +H     +GL  D+ + TAL  M+ +CGDV GA
Sbjct: 279 GIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGA 338

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
            +       RD+ ++NA++A    HG  EEA   +  M   GV  N  T++ +LNACS +
Sbjct: 339 KQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTS 398

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
             +  G+ +    +  +G    ++    ++ +  R G L  A E+  +MP R ++I W A
Sbjct: 399 KALGAGE-LIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKR-DLISWNA 456

Query: 551 LLA 553
           ++A
Sbjct: 457 IIA 459


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 218/602 (36%), Positives = 349/602 (57%), Gaps = 6/602 (0%)

Query: 30  TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL 89
           TN I+ +T    L   Y ++++   AL+    + K G EV+ F   T+LK    + + HL
Sbjct: 99  TNTISFVT----LAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHL 154

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
              +H    K G   DA+V  ALI  YS  G++  AR++FD++  +D+VSW+ M+  Y  
Sbjct: 155 CWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAE 214

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
               EE+L++  +MR M  +P+   +   +     +   ++GK++H C ++ C D  L V
Sbjct: 215 NCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFV 274

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            IA  L+++Y+K G +  A++LF  + +  ++ W++MI+ Y + +   E + LF  M + 
Sbjct: 275 GIA--LLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQT 332

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
           +V P+  T  S++  C     L LGK +H+ +L+ G   ++ ++NA++D+Y KC EI ++
Sbjct: 333 SVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENS 392

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             LF+ +  ++ + WN +I  Y Q    ++A  LF HM    ++P EVT   +L      
Sbjct: 393 MKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASL 452

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            ALE G  +H+   K     D ++  +L+DMYAKCG +N A   F +   RD   WNAM+
Sbjct: 453 AALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMI 512

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
            GY MHG   EAL  F  M+ +  KPN +TF+G+L+ACS+AGL+ +G++ F+ M     +
Sbjct: 513 CGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDI 572

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            P IEHY CMV LLGR G  DEA ++I  +  +P+++VW ALL A  +HK   +G + A 
Sbjct: 573 KPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQ 632

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            +LE+EP +   +VL+SN+YA A RW++VA VR+ M++ +V+KEPG S VE  G+VH F 
Sbjct: 633 HVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFS 692

Query: 630 RG 631
            G
Sbjct: 693 VG 694



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 117/264 (44%), Gaps = 10/264 (3%)

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           GK LH +IL+ G    L   N L++ Y +   ++ A  LFD M   + + +  +   Y++
Sbjct: 54  GKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSR 113

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
            H   +A    + +       N      LL L        +   LH  + K G   D  +
Sbjct: 114 DHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFV 173

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
            TAL+D Y+  G+V+ A  +F +   +D+  W  M+A Y  +   EE+L  F  M   G 
Sbjct: 174 GTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGY 233

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG----CMVDLLGRAGLL 529
           KPN  T  G L +C        GKS     VHG  L    +H       +++L  ++G +
Sbjct: 234 KPNNFTISGALKSCLGLEAFNVGKS-----VHGCALKGCYDHDLFVGIALLELYAKSGEI 288

Query: 530 DEAHEMIKSMPLRPNMIVWGALLA 553
            +A  + + MP + ++I W  ++A
Sbjct: 289 IDAQRLFEEMP-KTDLIPWSLMIA 311


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/603 (35%), Positives = 359/603 (59%), Gaps = 2/603 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N+L + Y++ +    A+ ++  M  +G + + F++ +++ AC  +  +  GK IHG
Sbjct: 223 VVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHG 282

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + IK G D D + +NAL+ MY++ G L  A  +F+++   D+VSW+ +I G       E+
Sbjct: 283 YLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQ 342

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           ALE++ +M+   I P+   + S +   A +   +LG+ +H+ +++   +  L V++   L
Sbjct: 343 ALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVG--L 400

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMYSKC  L  A+  FN L +  +++W  +ISGY +  E  E + LF EM +E +  ++
Sbjct: 401 VDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQ 460

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T+ +++     +  + + + +H   +++GF   + + N+L+D YGKC  +  A  +F+ 
Sbjct: 461 TTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEE 520

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
               D++ + ++I+AYAQ    ++A +LF+ M+  +++P+      LL+ C    A E G
Sbjct: 521 CTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQG 580

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           K LH +I K G  +D+    +LV+MYAKCG ++ A R FSE   R I  W+AM+ G   H
Sbjct: 581 KQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQH 640

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G G +AL  F  M + GV PN IT + +L AC+HAGLVTE K  F+ M    G  P  EH
Sbjct: 641 GHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEH 700

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y CM+DLLGRAG ++EA E++  MP   N  VWGALL A+++HK+  +G  AA  +  +E
Sbjct: 701 YACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILE 760

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
           P+  G +VL++NIYA A +W +VA VRR+M++ +VKKEPG S +EV   V+ F+ G   +
Sbjct: 761 PEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVYTFLVGDRSH 820

Query: 636 WKS 638
           ++S
Sbjct: 821 YRS 823



 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 160/525 (30%), Positives = 275/525 (52%), Gaps = 8/525 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +++L++ Y +N     AL  +  M   G + + FT  ++LKAC+ V    +GK++HG
Sbjct: 122 LVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHG 181

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             + +G +GD +V+N L+ MY++C   + ++ LFDE+P R+VVSW+ +   Y +     E
Sbjct: 182 VVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGE 241

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+ +  EM    I+P+E ++ SMV+    + D   GK IH  +++   D       A AL
Sbjct: 242 AVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYD--WDPFSANAL 299

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+K G+LA A  +F ++ Q  +VSW  +I+G +      + + L  +M    + P+ 
Sbjct: 300 VDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNI 359

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T+ S +  C  +G  +LG+ LH+ +++   E  L ++  LVDMY KC  +  AR  F+ 
Sbjct: 360 FTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNL 419

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +  KD++ WNA+IS Y+Q     +A  LF+ M    +  N+ T+  +L        + + 
Sbjct: 420 LPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVC 479

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H    K G   D+ +  +L+D Y KC  V  A R+F E    D+  + +M+  Y  +
Sbjct: 480 RQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQY 539

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL--GLVPKI 513
           G GEEAL  F++M+   +KP+      LLNAC++     +GK +    VH L  G V  I
Sbjct: 540 GQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLH---VHILKYGFVLDI 596

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
                +V++  + G +D+A      +  R  ++ W A++     H
Sbjct: 597 FAGNSLVNMYAKCGSIDDAGRAFSELTER-GIVSWSAMIGGLAQH 640



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 159/549 (28%), Positives = 274/549 (49%), Gaps = 22/549 (4%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
             P  +    V  + ++ + ++ LN+   + K      + +   +L  C        G +
Sbjct: 21  FKPAPKLIQTVPQFSQDPQTTAILNL---IDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQ 77

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IH    K+GL  D  + N LI +YS+C +   AR L DE    D+VSWS +I GY + GL
Sbjct: 78  IHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGL 137

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
              AL    EM  + ++ +E    S++   + V D+ +GK +H  VV +  +    V +A
Sbjct: 138 GGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGD--VFVA 195

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
             L+ MY+KC     +K+LF+ + + +VVSW  + S Y++ +   E V LF EM+   + 
Sbjct: 196 NTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIK 255

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P+E ++ S++  C  +     GK +H Y+++ G+++    ANALVDMY K  ++  A ++
Sbjct: 256 PNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISV 315

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ +K  D++ WNAVI+        ++A EL   MK S + PN  T+   L  C   G  
Sbjct: 316 FEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLK 375

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           E+G+ LH+ + K  +E D+ +   LVDMY+KC  +  A   F+    +D+  WNA+++GY
Sbjct: 376 ELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGY 435

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD--KMVHGL--- 507
             +    EAL  FV+M + G+  N  T   +L +       T G  V    + VHGL   
Sbjct: 436 SQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKS-------TAGLQVVHVCRQVHGLSVK 488

Query: 508 -GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
            G    I     ++D  G+   +++A  + +   +  +++ + +++ A   +     GE 
Sbjct: 489 SGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTI-GDLVSFTSMITA---YAQYGQGEE 544

Query: 567 AATQILEIE 575
           A    LE++
Sbjct: 545 ALKLFLEMQ 553



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 117/246 (47%), Gaps = 23/246 (9%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I  L  + S++T+Y +  +   AL ++  M+    + D F   ++L ACA +     GK+
Sbjct: 523 IGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQ 582

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H   +K G   D +  N+L+ MY++CGS+  A   F E+  R +VSWS MI G  + G 
Sbjct: 583 LHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGH 642

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK------DEK 206
             +AL++  +M    + P+ + ++S+           LG   HA +V   K      +E 
Sbjct: 643 GRQALQLFNQMLKEGVSPNHITLVSV-----------LGACNHAGLVTEAKLYFESMEEL 691

Query: 207 LGVAIA----TALIDMYSKCGNLAYAKQLFNRLNQNSVVS-WTVMISGYIRCNEINEGVR 261
            G          +ID+  + G +  A +L N++   +  S W  ++ G  R ++  E  R
Sbjct: 692 FGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALL-GAARIHKDVELGR 750

Query: 262 LFAEMI 267
             AEM+
Sbjct: 751 RAAEML 756


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 218/592 (36%), Positives = 334/592 (56%), Gaps = 4/592 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+  Y +       L ++  M++  ++   FT+ T+LK CA       GK +H  A+
Sbjct: 19  WNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLHALAL 78

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++G + D ++  +L+ MYS+CG++  A  +F ++ N DVV+WS MI G  + G  +EA E
Sbjct: 79  RSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAAE 138

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALID 217
           +   MR    RP++  + S+VS   ++ D+  G++IH C+ +   + + L   ++  LI 
Sbjct: 139 LFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNL---VSNPLIM 195

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY K   +    ++F  +    +VSW  ++SG+        G R+F +M+ E   P+  T
Sbjct: 196 MYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFT 255

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
            +S++  C  +   + GK +HA+I++N  +    +  ALVDMY K R +  A   FD + 
Sbjct: 256 FISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLV 315

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           ++D+  W  +IS YAQ    +KA + F  M+   ++PNE T+   LS C+    LE G+ 
Sbjct: 316 NRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQ 375

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH    K G   D+ + +ALVD+Y KCG +  A  +F   I RDI  WN +++GY  HG 
Sbjct: 376 LHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQ 435

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           GE+AL  F  M   G+ P+  TFIG+L+ACS  GLV EGK  FD M    G+ P IEHY 
Sbjct: 436 GEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYA 495

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVD+LGRAG  +E    I+ M L P  ++W  +L A KLH N   GE AA ++ E+EP 
Sbjct: 496 CMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEMEPM 555

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
                +L+SNI+A   RW+DV  +R +M    +KKEPG S VEV+G VH F+
Sbjct: 556 MDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPGCSWVEVDGQVHVFL 607



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 229/442 (51%), Gaps = 20/442 (4%)

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           A  LF  MP ++ VSW+ ++ GY + G  ++ L++  +M+  + + S+  + +++   A+
Sbjct: 4   AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63

Query: 185 VADVDLGKAIHACVVRN-CK-DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVS 242
              +  GK +HA  +R+ C+ DE LG     +L+DMYSKCG +  A ++F ++    VV+
Sbjct: 64  TGSLREGKVLHALALRSGCEIDEFLGC----SLVDMYSKCGTVYDALKVFTKIRNPDVVA 119

Query: 243 WTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYIL 302
           W+ MI+G  +     E   LF  M  +   P++ T+ SL+     +G L+ G+ +H  I 
Sbjct: 120 WSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCIC 179

Query: 303 RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
           + GFE    ++N L+ MY K R +     +F+ M + D++ WNA++S +  +    +   
Sbjct: 180 KYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPR 239

Query: 363 LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYA 422
           +F  M +   +PN  T + +L  C+     E GK +H +I K   + D  + TALVDMYA
Sbjct: 240 IFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYA 299

Query: 423 KCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
           K   +  A   F   + RDI  W  +++GY      E+A+ +F  M+R G+KPN  T   
Sbjct: 300 KARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLAS 359

Query: 483 LLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG------CMVDLLGRAGLLDEAHEMI 536
            L+ CSH   +  G+      +H + +  K  H+G       +VDL G+ G ++ A  + 
Sbjct: 360 CLSGCSHMATLENGRQ-----LHAVAV--KAGHFGDIFVGSALVDLYGKCGCMEHAEAIF 412

Query: 537 KSMPLRPNMIVWGALLAASKLH 558
           K +  R +++ W  +++    H
Sbjct: 413 KGLISR-DIVSWNTIISGYSQH 433



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 170/326 (52%), Gaps = 7/326 (2%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  + NP L  +N+L++ +  +        I+  M   G + + FT  ++L++C+ +L  
Sbjct: 210 FEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDP 269

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
             GK++H   IKN  D D +V  AL+ MY++   L  A   FD + NRD+ SW+ +I GY
Sbjct: 270 EFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGY 329

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
            +    E+A++  R+M+   I+P+E  + S +S  + +A ++ G+ +HA  V   K    
Sbjct: 330 AQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAV---KAGHF 386

Query: 208 G-VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
           G + + +AL+D+Y KCG + +A+ +F  L    +VSW  +ISGY +  +  + +  F  M
Sbjct: 387 GDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMM 446

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR-NGFEFSLAMANALVDMYGKCRE 325
           + E + P E T + ++  C F+G ++ GK     + +  G   S+     +VD+ G+  +
Sbjct: 447 LSEGIMPDEATFIGVLSACSFMGLVEEGKKRFDSMSKIYGINPSIEHYACMVDILGRAGK 506

Query: 326 IRSARTLFDGMK-SKDVMIWNAVISA 350
               +   + M  +   +IW  V+ A
Sbjct: 507 FNEVKIFIEEMNLTPYSLIWETVLGA 532


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 222/586 (37%), Positives = 332/586 (56%), Gaps = 44/586 (7%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           K+IH   IK GL    +  + LI+    S  G+L  A  LF+ +   +   W+TMIRG  
Sbjct: 49  KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNS 108

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
               P  A++    M    + P+      ++   A V     GK IH  V+      KLG
Sbjct: 109 LSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVL------KLG 162

Query: 209 VA----IATALIDMYSKCGNLAYA-------------------------------KQLFN 233
           +     + T+LI+MY++ G L YA                               ++LF 
Sbjct: 163 LESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFE 222

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL 293
            +     VSW  MI+GY +     E +  F EM   NV P+E T+++++  C   G L+L
Sbjct: 223 EIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLEL 282

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           G W+ ++I  +G   +L + NAL+DMY KC ++  AR LF+G+  KD++ WN +I  Y+ 
Sbjct: 283 GNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSH 342

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV-DVI 412
            +   +A  LF  M+ S V PN+VT V +L  C   GAL++GKW+H YI+K+ L + +  
Sbjct: 343 MNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTS 402

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           L T+L+DMYAKCG++  A ++F+    + +  WNAM++G  MHG    AL  F  M   G
Sbjct: 403 LWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEG 462

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
            +P+ ITF+G+L+ACSHAGLV  G+  F  MV    + PK++HYGCM+DLLGRAGL DEA
Sbjct: 463 FEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEA 522

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVA 592
             ++K+M ++P+  +WG+LL A ++H N  +GE AA  + E+EP+N G  VL+SNIYA A
Sbjct: 523 EALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATA 582

Query: 593 NRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
            RW+DVA +R  + +  +KK PG SS+EV+ +VH+F+ G  V+ +S
Sbjct: 583 GRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFLVGDKVHEQS 628



 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 155/461 (33%), Positives = 247/461 (53%), Gaps = 46/461 (9%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           I N + R NSL +S      P  A++ Y  M   G E +++T P +LK+CA+V  T  GK
Sbjct: 99  IWNTMIRGNSLSSS------PVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGK 152

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGS------------------------------ 121
           +IHG  +K GL+ D +V  +LI MY++ G                               
Sbjct: 153 QIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRG 212

Query: 122 -LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
            L  AR LF+E+P RD VSW+ MI GY + G  EEAL   +EM+  ++ P+E  M++++S
Sbjct: 213 CLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLS 272

Query: 181 LFADVADVDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
             A    ++LG  + + +    +D  LG  + +  ALIDMYSKCG+L  A+ LF  + + 
Sbjct: 273 ACAQSGSLELGNWVRSWI----EDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEK 328

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
            ++SW VMI GY   N   E + LF +M + NV P+++T +S++  C ++G L LGKW+H
Sbjct: 329 DIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIH 388

Query: 299 AYILRNGFEFS-LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           AYI +     +  ++  +L+DMY KC  I +A+ +F GMK K +  WNA+IS  A     
Sbjct: 389 AYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHA 448

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW-LHTYIEKQGLEVDVILKTA 416
           + A ELF  M+     P+++T VG+LS C+ AG +E+G+    + +E   +   +     
Sbjct: 449 NMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGC 508

Query: 417 LVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
           ++D+  + G  + A  L     +  D  +W +++    +HG
Sbjct: 509 MIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHG 549


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  416 bits (1070), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/579 (38%), Positives = 338/579 (58%), Gaps = 4/579 (0%)

Query: 55  ALNIYAFMRK-NGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALI 113
           AL  +A M   +GS     T  ++LK CA       G+ +H      GL  +A  + AL 
Sbjct: 208 ALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALA 267

Query: 114 QMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSE 172
            MY++C     AR +FD MP RD V+W+ ++ GY R GL E A+ ++  M+  D  RP  
Sbjct: 268 NMYAKCRRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDA 327

Query: 173 VAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLF 232
           V ++S++   AD   +   + +HA  VR   DE+  V ++TA++D+Y KCG +  A+++F
Sbjct: 328 VTLVSVLPACADAQALGACREVHAFAVRGGFDEQ--VNVSTAILDVYCKCGAVDSARKVF 385

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
           + +   + VSW  MI GY    +  E + LF  M+ E V  +++++L+ +  CG +G L 
Sbjct: 386 DGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLD 445

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
            G+ +H  ++R G E ++ + NAL+ MY KC+    A  +FD +  K  + WNA+I    
Sbjct: 446 EGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCT 505

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
           Q    + A  LF  M++  V+P+  T+V ++    +       +W+H Y  +  L+ DV 
Sbjct: 506 QNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVY 565

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           + TAL+DMYAKCG V+ A  LF+ A  R +  WNAM+ GYG HG G+ A+  F +M+ SG
Sbjct: 566 VLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSG 625

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
             PN  TF+ +L+ACSHAGLV EG+  F  M    GL P +EHYG MVDLLGRAG L EA
Sbjct: 626 KVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEA 685

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVA 592
              I+ MP+ P + V+GA+L A KLHKN  + E +A +I E+EP+   Y+VL++NIYA A
Sbjct: 686 WSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANA 745

Query: 593 NRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           + W DVA VR  M++  ++K PG+S V++   +H F  G
Sbjct: 746 SLWKDVARVRTAMEKKGLQKTPGWSIVQLKNEIHTFYSG 784



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/420 (31%), Positives = 221/420 (52%), Gaps = 5/420 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRK-NGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +N+LV  Y +N    +A+ +   M++ +G   D  T+ ++L ACA        +E+H FA
Sbjct: 294 WNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFA 353

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           ++ G D    VS A++ +Y +CG++ SAR +FD M +R+ VSW+ MI+GY   G   EAL
Sbjct: 354 VRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENGDATEAL 413

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            + + M    +  ++V++++ +    ++  +D G+ +H  +VR   +    V +  ALI 
Sbjct: 414 ALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESN--VNVMNALIT 471

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY KC     A Q+F+ L   + VSW  MI G  +     + VRLF+ M  ENV P   T
Sbjct: 472 MYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFT 531

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++S+I     +      +W+H Y +R   +  + +  AL+DMY KC  +  AR+LF+  +
Sbjct: 532 LVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSAR 591

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK- 396
            + V+ WNA+I  Y        A ELF  MK S   PNE T + +LS C+ AG ++ G+ 
Sbjct: 592 DRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQE 651

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
           +  +  E  GLE  +     +VD+  + G ++ A+    +  +   I ++ AM+    +H
Sbjct: 652 YFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLH 711



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 184/373 (49%), Gaps = 7/373 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y +N   + AL ++  M   G +V + ++   L AC ++     G+ +H   +
Sbjct: 396 WNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLV 455

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + GL+ +  V NALI MY +C     A  +FDE+  +  VSW+ MI G  + G  E+A+ 
Sbjct: 456 RIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVR 515

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M+  +++P    ++S++   AD++D    + IH   +R   D+   V + TALIDM
Sbjct: 516 LFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQD--VYVLTALIDM 573

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG ++ A+ LFN      V++W  MI GY         V LF EM      P+E T 
Sbjct: 574 YAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTF 633

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           LS++  C   G +  G+   + +  + G E  +     +VD+ G+  ++  A +    M 
Sbjct: 634 LSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMP 693

Query: 338 -SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE-VTMVGLLSLCTEAGALEMG 395
               + ++ A++ A      ++ A E     ++ ++ P E V  V L ++   A   +  
Sbjct: 694 MEPGISVYGAMLGACKLHKNVELAEE--SAQRIFELEPEEGVYHVLLANIYANASLWKDV 751

Query: 396 KWLHTYIEKQGLE 408
             + T +EK+GL+
Sbjct: 752 ARVRTAMEKKGLQ 764


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 223/592 (37%), Positives = 341/592 (57%), Gaps = 4/592 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+  Y +      A  ++  M   G E    T  ++L AC+     + GKE+H   +
Sbjct: 126 WNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVV 185

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G   D  +  AL+ MY + GS+  AR +FD +  RDV +++ M+ GY + G  E+A E
Sbjct: 186 TAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFE 245

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIATALID 217
           +   M+ + ++P++++ +S++        +  GKA+HA C+     D+   + +AT+LI 
Sbjct: 246 LFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDD---IRVATSLIR 302

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+ CG++  A+++F+ +    VVSWTVMI GY     I +   LFA M EE + P  IT
Sbjct: 303 MYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRIT 362

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
            + ++  C     L   + +H+ +   GF   L ++ ALV MY KC  I+ AR +FD M 
Sbjct: 363 YMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMP 422

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +DV+ W+A+I AY +     +AFE F  MK S + P+ VT + LL+ C   GAL++G  
Sbjct: 423 RRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGME 482

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           ++T   K  L   V L  AL+ M AK G V  A  +F   + RD+  WNAM+ GY +HG 
Sbjct: 483 IYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGN 542

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
             EAL  F  M +   +PN +TF+G+L+ACS AG V EG+  F  ++ G G+VP ++ YG
Sbjct: 543 AREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYG 602

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLLGRAG LDEA  +IKSMP++P   +W +LL A ++H N  + E AA + L I+P 
Sbjct: 603 CMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPY 662

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +    V +S++YA A  W +VA VR+VM+   ++KE G + +EV G VH F+
Sbjct: 663 DGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTWIEVAGKVHTFV 714



 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 161/528 (30%), Positives = 285/528 (53%), Gaps = 14/528 (2%)

Query: 35  PLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           P  R+ S  T  +  N      ++   + + G+ +D+ T   + + C ++    LGK++ 
Sbjct: 27  PSARFRSTFTRRVGAN------DVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVR 80

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
              I+ G   + Y  N LI++YS CG++  AR +FD + N+ VV+W+ +I GY + G  +
Sbjct: 81  DHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVK 140

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIA 212
           EA  + R+M    + PS +  +S++   +  A ++ GK +HA VV      D ++G    
Sbjct: 141 EAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIG---- 196

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           TAL+ MY K G++  A+Q+F+ L+   V ++ VM+ GY +  +  +   LF  M +  + 
Sbjct: 197 TALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLK 256

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P++I+ LS++  C     L  GK +HA  +  G    + +A +L+ MY  C  I  AR +
Sbjct: 257 PNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRV 316

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FD MK +DV+ W  +I  YA+   I+ AF LF  M+   ++P+ +T + +++ C  +  L
Sbjct: 317 FDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANL 376

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
              + +H+ ++  G   D+++ TALV MYAKCG +  A ++F     RD+  W+AM+  Y
Sbjct: 377 NHAREIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAY 436

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             +G G EA   F  M+RS ++P+G+T+I LLNAC H G +  G  ++ + +    LV  
Sbjct: 437 VENGYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKA-DLVSH 495

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
           +     ++ +  + G ++ A  +  +M +R ++I W A++    LH N
Sbjct: 496 VPLGNALIIMNAKHGSVERARYIFDTM-VRRDVITWNAMIGGYSLHGN 542



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 130/426 (30%), Positives = 223/426 (52%), Gaps = 4/426 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I  ++ +N +V  Y K+     A  ++  M++ G + +  +  +IL  C        GK 
Sbjct: 221 IRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKA 280

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H   +  GL  D  V+ +LI+MY+ CGS+  AR +FD M  RDVVSW+ MI GY   G 
Sbjct: 281 VHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGN 340

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            E+A  +   M+   I+P  +  + +++  A  A+++  + IH+ V  +       + ++
Sbjct: 341 IEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQV--DIAGFGTDLLVS 398

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           TAL+ MY+KCG +  A+Q+F+ + +  VVSW+ MI  Y+      E    F  M   N+ 
Sbjct: 399 TALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIE 458

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P  +T ++L+  CG +G L +G  ++   ++      + + NAL+ M  K   +  AR +
Sbjct: 459 PDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYI 518

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FD M  +DV+ WNA+I  Y+      +A  LF  M   + RPN VT VG+LS C+ AG +
Sbjct: 519 FDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFV 578

Query: 393 EMGKWLHTY-IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMA 450
           + G+   TY +E +G+   V L   +VD+  + G+++ A  L  S  +     +W++++ 
Sbjct: 579 DEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLV 638

Query: 451 GYGMHG 456
              +HG
Sbjct: 639 ACRIHG 644



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 159/319 (49%), Gaps = 4/319 (1%)

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T + L   C  +    LGK +  +I++ G + ++   N L+ +Y  C  +  AR +FD +
Sbjct: 59  TYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFDSV 118

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           ++K V+ WNA+I+ YAQ   + +AF LF  M    + P+ +T + +L  C+    L  GK
Sbjct: 119 ENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGK 178

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H  +   G   D  + TALV MY K G ++ A ++F     RD+  +N M+ GY   G
Sbjct: 179 EVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSG 238

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             E+A   F  M++ G+KPN I+F+ +L+ C     +  GK+V  + ++  GLV  I   
Sbjct: 239 DWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNA-GLVDDIRVA 297

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN--PSMGEIAATQILEI 574
             ++ +    G ++ A  +  +M +R +++ W  ++     + N   + G  A  Q   I
Sbjct: 298 TSLIRMYTTCGSIEGARRVFDNMKVR-DVVSWTVMIEGYAENGNIEDAFGLFATMQEEGI 356

Query: 575 EPQNYGYNVLMSNIYAVAN 593
           +P    Y  +M+     AN
Sbjct: 357 QPDRITYMHIMNACAISAN 375


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 215/594 (36%), Positives = 336/594 (56%), Gaps = 3/594 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMR-KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           + +L++ Y+  N  S AL ++  MR ++G  +D F +    KAC      + G+ +HG+A
Sbjct: 83  WTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYA 142

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K GL    +V +AL+ MY++ G +   R +F EMP R+VVSW+ +I G  R G  +EAL
Sbjct: 143 VKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEAL 202

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
               EM    +          +   AD   ++ G+ IHA  ++   D  +   +A  L  
Sbjct: 203 VYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFD--VSSFVANTLAT 260

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+KCG L Y   LF +++   VVSWT +I+  ++  +    V+ F  M E +V P+E T
Sbjct: 261 MYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYT 320

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             ++I  C  +  ++ G+ LHA IL  G   SL++ N+++ MY KC ++ S+  +F  M 
Sbjct: 321 FAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMT 380

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +D++ W+ +I+ Y+Q   + +AFEL   M++   +P E  +  +LS C     LE GK 
Sbjct: 381 RRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQ 440

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH Y+   GLE   ++ +AL++MY KCG +  A R+F  A   DI  W AM+ GY  HG 
Sbjct: 441 LHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGY 500

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
             E +  F  + R G++P+ +TFIG+L+ACSHAGLV  G   F+ M     + P  EHYG
Sbjct: 501 SREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYG 560

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CM+DLL RAG L +A  MI++MP   + +VW  LL A ++H +   G   A +IL++EP 
Sbjct: 561 CMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPN 620

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             G ++ ++NIYA   +W + A +R++MK   V KEPG+S ++V  LV  F+ G
Sbjct: 621 CAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAG 674



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 222/449 (49%), Gaps = 13/449 (2%)

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI 168
           SN  ++   + G L +AR +FD+M  +D +SW+T+I GY       EAL + + MR    
Sbjct: 52  SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 111

Query: 169 RPSEVAMISMVSLFADV-ADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
              +  ++S+      + +DV+ G+ +H   V+        V + +AL+DMY+K G +  
Sbjct: 112 LRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNS--VFVGSALLDMYTKNGKIFE 169

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
            +++F+ +   +VVSWT +I+G +R     E +  F+EM    V     T    +  C  
Sbjct: 170 GRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACAD 229

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
            G L  G+ +HA  ++ GF+ S  +AN L  MY KC ++    TLF+ M  +DV+ W  +
Sbjct: 230 SGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTI 289

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           I+   Q    + A + FI M+ S V PNE T   ++S C     +E G+ LH  I   GL
Sbjct: 290 ITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGL 349

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
              + ++ +++ MYAKCG +  +  +F E   RDI  W+ ++AGY   G   EA      
Sbjct: 350 AASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSW 409

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG----CMVDLL 523
           M   G KP       +L+AC +  ++  GK      +H   L   +EH       ++++ 
Sbjct: 410 MRMEGPKPTEFALASVLSACGNMAILEHGKQ-----LHAYVLSIGLEHTAMVLSALINMY 464

Query: 524 GRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
            + G ++EA  +  +     +++ W A++
Sbjct: 465 CKCGSIEEASRIFDAAE-NDDIVSWTAMI 492



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 168/334 (50%), Gaps = 3/334 (0%)

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           K G+L  A+++F++++Q   +SWT +ISGY+  N+ +E + LF  M  E+    +  ILS
Sbjct: 61  KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120

Query: 281 LIIE-CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           L  + CG    +  G+ LH Y ++ G   S+ + +AL+DMY K  +I   R +F  M  +
Sbjct: 121 LAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR 180

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           +V+ W A+I+   +A    +A   F  M  S+V  +  T    L  C ++GAL  G+ +H
Sbjct: 181 NVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIH 240

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
               K+G +V   +   L  MY KCG +     LF +   RD+  W  ++      G  E
Sbjct: 241 AQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEE 300

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
            A+  F+ M  S V PN  TF  +++ C++   +  G+ +   ++H LGL   +     +
Sbjct: 301 CAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILH-LGLAASLSVENSI 359

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           + +  + G L  +  +   M  R +++ W  ++A
Sbjct: 360 MTMYAKCGQLTSSSVIFHEMT-RRDIVSWSTIIA 392



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 138/289 (47%), Gaps = 27/289 (9%)

Query: 28  SYTNIINPLTR-----YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACA 82
           S + I + +TR     +++++  Y +    S A  + ++MR  G +   F + ++L AC 
Sbjct: 371 SSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACG 430

Query: 83  QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
            + +   GK++H + +  GL+  A V +ALI MY +CGS+  A  +FD   N D+VSW+ 
Sbjct: 431 NMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTA 490

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           MI GY   G   E +++  ++  + +RP  V  I ++S  +    VDLG         N 
Sbjct: 491 MINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYF-----NA 545

Query: 203 KDEKLGVAIAT----ALIDMYSKCGNLAYAKQLFNRL--NQNSVVSWTVMISGYIRCNEI 256
             +K  ++ +      +ID+  + G L+ A+ +   +  +++ VV W+ ++       ++
Sbjct: 546 MSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVV-WSTLLRACRVHGDV 604

Query: 257 NEGVRLFAEM--IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
             G R    +  +E N   + IT+ ++            GKW  A  +R
Sbjct: 605 ERGRRTAERILQLEPNCAGTHITLANIYA--------SKGKWREAADIR 645


>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 210/594 (35%), Positives = 357/594 (60%), Gaps = 3/594 (0%)

Query: 35  PLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           P+  +N+++   +     + A++ Y  M ++G   DN+T P +LKAC+ +    LG+ +H
Sbjct: 97  PIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSLHALQLGRWVH 156

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
              +      + YV  A+I M+++CGS+  AR +F+EMP+RD+ SW+ +I G    G   
Sbjct: 157 E-TMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECL 215

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           EAL + R+MR   + P  V + S++     +  V LG A+  C VR+  +  L V+   A
Sbjct: 216 EALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVS--NA 273

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           +IDMY KCG+   A ++F+ +  + VVSW+ +I+GY +     E  +L+  MI   +  +
Sbjct: 274 VIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATN 333

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            I   S++   G +  L+ GK +H ++L+ G    + + +AL+ MY  C  I+ A ++F+
Sbjct: 334 AIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFE 393

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
               KD+M+WN++I  Y      + AF  F  +  ++ RPN +T+V +L +CT+ GAL  
Sbjct: 394 CTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQ 453

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           GK +H Y+ K GL ++V +  +L+DMY+KCG +    ++F + + R++  +N M++  G 
Sbjct: 454 GKEIHGYVTKSGLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGS 513

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           HG GE+ L F+  M+  G +PN +TFI LL+ACSHAGL+  G  +++ M++  G+ P +E
Sbjct: 514 HGQGEKGLAFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNME 573

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HY CMVDL+GRAG LD A++ I  MP+ P+  V+G+LL A +LH    + E+ A +IL++
Sbjct: 574 HYSCMVDLIGRAGDLDGAYKFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQL 633

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           +  + G+ VL+SN+YA   RW D++ VR ++K+  ++K+PG S ++V   ++ F
Sbjct: 634 KADDSGHYVLLSNLYASGKRWEDMSKVRSMIKDKGLEKKPGSSWIQVGHCIYVF 687



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 137/524 (26%), Positives = 259/524 (49%), Gaps = 17/524 (3%)

Query: 58  IYAFMRKNGSEVDNFTIPTI--LKACAQVLMTHLGKEIHGFAIKNGL-----DGDAYVSN 110
           +  F R+  S   +FT+ +   LK+   +   H  + +H   +  G         +  ++
Sbjct: 15  LITFTRQQHSLPIHFTVTSFHRLKSPPNL---HEARTLHALLLVLGFFQPTCPHSSSFAS 71

Query: 111 ALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRP 170
            L+ +Y   GSL  A   F  +P++ +++W+ ++RG    G   +A+     M    + P
Sbjct: 72  QLVNVYVNFGSLQHAFLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTP 131

Query: 171 SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQ 230
                  ++   + +  + LG+ +H  +       K  V +  A+IDM++KCG++  A++
Sbjct: 132 DNYTYPLVLKACSSLHALQLGRWVHETMH---GKTKANVYVQCAVIDMFAKCGSVEDARR 188

Query: 231 LFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGG 290
           +F  +    + SWT +I G +   E  E + LF +M  E + P  + + S++  CG +  
Sbjct: 189 MFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEA 248

Query: 291 LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
           ++LG  L    +R+GFE  L ++NA++DMY KC +   A  +F  M   DV+ W+ +I+ 
Sbjct: 249 VKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAG 308

Query: 351 YAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
           Y+Q     ++++L+I M    +  N +    +L    +   L+ GK +H ++ K+GL  D
Sbjct: 309 YSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSD 368

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
           V++ +AL+ MYA CG +  A  +F     +DI +WN+M+ GY + G  E A   F  +  
Sbjct: 369 VVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWG 428

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLL 529
           +  +PN IT + +L  C+  G + +GK +   +   GLGL   + +   ++D+  + G L
Sbjct: 429 AEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSVGN--SLIDMYSKCGFL 486

Query: 530 DEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           +   ++ K M +R N+  +  +++A   H     G     Q+ E
Sbjct: 487 ELGEKVFKQMMVR-NVTTYNTMISACGSHGQGEKGLAFYEQMKE 529



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 173/332 (52%), Gaps = 5/332 (1%)

Query: 21  IKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA 80
           ++ H  FS+  + + +  +++L+  Y +N     +  +Y  M   G   +     ++L A
Sbjct: 285 LEAHRVFSHM-VYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPA 343

Query: 81  CAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSW 140
             ++ +   GKE+H F +K GL  D  V +ALI MY+ CGS+  A  +F+   ++D++ W
Sbjct: 344 LGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVW 403

Query: 141 STMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR 200
           ++MI GY+  G  E A    R +   + RP+ + ++S++ +   +  +  GK IH  V +
Sbjct: 404 NSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTK 463

Query: 201 NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
           +     L V++  +LIDMYSKCG L   +++F ++   +V ++  MIS      +  +G+
Sbjct: 464 S--GLGLNVSVGNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGL 521

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDM 319
             + +M EE   P+++T +SL+  C   G L  G  L+  ++ + G E ++   + +VD+
Sbjct: 522 AFYEQMKEEGNRPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDL 581

Query: 320 YGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
            G+  ++  A      M  + D  ++ +++ A
Sbjct: 582 IGRAGDLDGAYKFITRMPMTPDANVFGSLLGA 613


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  415 bits (1067), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 231/619 (37%), Positives = 370/619 (59%), Gaps = 22/619 (3%)

Query: 26  KFSYTNIIN-PLTRYNSLVTSYIKNNKPSSALNIYA-FMRKNGSEVDNFTIPTILKACAQ 83
           ++++ +I N  +  +N +++ Y +    S  +  ++ FM  +G + D  T P++LKAC  
Sbjct: 106 RYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN 165

Query: 84  VLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTM 143
           V     G +IH  A+K G   D YV+ +LI +Y   G++V+AR LFDEMP RD+ SW+ M
Sbjct: 166 VTD---GNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAM 222

Query: 144 IRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
           I GY + G  +EAL +   +R MD     V ++S++S   +  D + G  IH+  +++  
Sbjct: 223 ISGYCQSGNAKEALTLSDGLRAMD----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL 278

Query: 204 DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE----G 259
           + +L V+    LID+Y++ G+L   +++F+R+    ++SW  +I  Y    E+NE     
Sbjct: 279 ESELFVS--NKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAY----ELNEQPLRA 332

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVD 318
           + LF EM    + P  +T++SL      +G ++  + +  + LR G F   + + NA+V 
Sbjct: 333 ILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVV 392

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS--KVRPNE 376
           MY K   + SAR +F+ + +KDV+ WN +IS YAQ     +A E++  M+    ++  N+
Sbjct: 393 MYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQ 452

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
            T V +L  C++AGAL  G  LH  + K GL +DV + T+L DMY KCG ++ A  LF +
Sbjct: 453 GTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQ 512

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
               +   WN ++A +G HG GE+A++ F +M   GVKP+ ITF+ LL+ACSH+GLV EG
Sbjct: 513 IPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEG 572

Query: 497 KSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
           +  F+ M    G+ P ++HYGCMVDL GRAG L+ A   IKSMPL+P+  +WGALL+A +
Sbjct: 573 EWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACR 632

Query: 557 LHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGF 616
           +H N  +G+IA+  + E+EP++ GY+VL+SN+YA A +W  V  +R +     ++K PG+
Sbjct: 633 VHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGW 692

Query: 617 SSVEVNGLVHKFIRGGMVN 635
           SS+EV+  V  F  G   +
Sbjct: 693 SSMEVDNKVEVFYTGNQTH 711



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 145/545 (26%), Positives = 269/545 (49%), Gaps = 29/545 (5%)

Query: 53  SSALNIYAFMRKNGSEVDNFT-IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNA 111
           S++ N      KNG+E      + T+ + C  +      K +H   + +    +  +S  
Sbjct: 35  SASANALQDCWKNGNESKEIDDVHTLFRYCTNL---QSAKCLHARLVVSNAIQNVCISAK 91

Query: 112 LIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE-MRFMDIRP 170
           L+ +Y   G++  ARY FD + NRDV +W+ MI GY R G   E +      M    ++P
Sbjct: 92  LVNLYCYLGNVALARYTFDHIHNRDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQP 151

Query: 171 SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLA 226
                 S++    +V D   G  IH      C   K G    V +A +LI +Y + G + 
Sbjct: 152 DYRTFPSVLKACRNVTD---GNKIH------CLALKFGFMWDVYVAASLIHLYCRYGAVV 202

Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
            A+ LF+ +    + SW  MISGY +     E + L   +   +     +T++SL+  C 
Sbjct: 203 NARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGLRAMD----SVTVVSLLSACT 258

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
             G    G  +H+Y +++G E  L ++N L+D+Y +   ++  + +FD M  +D++ WN+
Sbjct: 259 EAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNS 318

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           +I AY       +A  LF  M++S+++P+ +T++ L S+ ++ G +   + +  +  ++G
Sbjct: 319 IIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKG 378

Query: 407 LEV-DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
             + D+ +  A+V MYAK G V+ A  +F+    +D+  WN +++GY  +G   EA+  +
Sbjct: 379 WFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMY 438

Query: 466 VDMERSG--VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL 523
             ME  G  +  N  T++ +L ACS AG + +G  +  +++   GL   +     + D+ 
Sbjct: 439 NIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVGTSLADMY 497

Query: 524 GRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGY 581
           G+ G LD+A  +   +P R N + W  L+A    H +     +   ++L+  ++P +  +
Sbjct: 498 GKCGRLDDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITF 556

Query: 582 NVLMS 586
             L+S
Sbjct: 557 VTLLS 561


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Vitis vinifera]
          Length = 1005

 Score =  415 bits (1066), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 216/646 (33%), Positives = 354/646 (54%), Gaps = 25/646 (3%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTN-IINPLTR---------------------YNSLVTSY 46
           N+E  R  H ++ +  F  + +N +I+  ++                     + +++  Y
Sbjct: 245 NIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGY 304

Query: 47  IKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDA 106
             N      L ++  M+     ++  +  +   A A+ +    GKEIHG A++  +D D 
Sbjct: 305 AHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDI 364

Query: 107 YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM 166
            V+  L+ MY++CG    A+ LF  +  RD+V+WS +I    + G PEEAL + +EM+  
Sbjct: 365 LVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQ 424

Query: 167 DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLA 226
            ++P+ V ++S++   AD++ + LGK+IH   V+   D  L  +  TAL+ MY+KCG   
Sbjct: 425 KMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDL--STGTALVSMYAKCGFFT 482

Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
            A   FNR++   +V+W  +I+GY +  +    + +F ++    + P   T++ ++  C 
Sbjct: 483 AALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACA 542

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWN 345
            +  L  G  +H  I++ GFE    + NAL+DMY KC  + SA  LF+    +KD + WN
Sbjct: 543 LLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWN 602

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
            +I+AY Q     +A   F  M++    PN VT V +L       A   G   H  I + 
Sbjct: 603 VIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQM 662

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
           G   + ++  +L+DMYAKCG ++ + +LF+E  ++D   WNAM++GY +HG G+ A+  F
Sbjct: 663 GFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALF 722

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
             M+ S V+ + ++F+ +L+AC HAGLV EG+ +F  M     + P +EHY CMVDLLGR
Sbjct: 723 SLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGR 782

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLM 585
           AGL DE    IK MP+ P+  VWGALL + ++H N  +GE+A   ++++EP+N  + V++
Sbjct: 783 AGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVL 842

Query: 586 SNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           S+IYA + RW D    R  M ++ +KK PG S VE+   VH F  G
Sbjct: 843 SSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVG 888



 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 177/606 (29%), Positives = 306/606 (50%), Gaps = 31/606 (5%)

Query: 15  QCHAHIIKTHFKF--SYTNIIN--------PLTR-------------YNSLVTSYIKNNK 51
           Q HA II + FK   S T++IN         L R             +NS++ +Y ++ +
Sbjct: 50  QIHAQIIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQ 109

Query: 52  PSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNA 111
            + AL +Y  M + G E D +T   +LKAC   L    G   HG   + GL+ D ++   
Sbjct: 110 YNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAG 169

Query: 112 LIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPS 171
           L+ MYS+ G L  AR +FD+MP RDVV+W+ MI G  +   P EA++  R M+ + + PS
Sbjct: 170 LVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPS 229

Query: 172 EVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQL 231
            V+++++      +++++L ++IH  V R         A++  LID+YSKCG++  A+++
Sbjct: 230 SVSLLNLFPGICKLSNIELCRSIHGYVFR----RDFSSAVSNGLIDLYSKCGDVDVARRV 285

Query: 232 FNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL 291
           F+++     VSW  M++GY       E + LF +M   NV  ++++ +S  +       L
Sbjct: 286 FDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDL 345

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
           + GK +H   L+   +  + +A  L+ MY KC E   A+ LF G++ +D++ W+A+I+A 
Sbjct: 346 EKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAAL 405

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
            Q    ++A  LF  M+  K++PN VT++ +L  C +   L++GK +H +  K  ++ D+
Sbjct: 406 VQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDL 465

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
              TALV MYAKCG    A   F+    RDI  WN+++ GY   G    A+  F  +  S
Sbjct: 466 STGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLS 525

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
            + P+  T +G++ AC+    + +G  +   +V  LG          ++D+  + G L  
Sbjct: 526 AINPDAGTMVGVVPACALLNDLDQGTCIHGLIVK-LGFESDCHVKNALIDMYAKCGSLPS 584

Query: 532 AHEMIKSMPLRPNMIVWGALLAA--SKLHKNPSMGEIAATQILEIEPQNYGY-NVLMSNI 588
           A  +        + + W  ++AA     H   ++      ++    P +  + +VL +  
Sbjct: 585 AEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAA 644

Query: 589 YAVANR 594
           Y  A R
Sbjct: 645 YLAAFR 650


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 219/596 (36%), Positives = 338/596 (56%), Gaps = 3/596 (0%)

Query: 34   NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
            N +  +N +++ Y K      ++ ++  M+K G   +++T   ILK  A +      K I
Sbjct: 516  NKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVGECKRI 575

Query: 94   HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
            HG   K G      V N+LI  Y + G + SA  LFDE+ +RDVVSW++MI G    G  
Sbjct: 576  HGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCVMNGFS 635

Query: 154  EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
              ALE   +M  + +      +++ V+  A+V  + LG+A+H   V+ C   +  V    
Sbjct: 636  HSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSRE--VMFNN 693

Query: 214  ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
             L+DMYSKCGNL  A Q F ++ Q +VVSWT +I+ Y+R    ++ +RLF EM  + V P
Sbjct: 694  TLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSP 753

Query: 274  SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
               ++ S++  C     L  G+ +H YI +N     L ++NAL+DMY KC  +  A  +F
Sbjct: 754  DVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVF 813

Query: 334  DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
              +  KD++ WN +I  Y++    ++A +LF  M+  + RP+ +TM  LL  C    ALE
Sbjct: 814  SQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQ-KESRPDGITMACLLPACGSLAALE 872

Query: 394  MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            +G+ +H  I + G   ++ +  AL+DMY KCG +  A  LF     +D+  W  M++G G
Sbjct: 873  IGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCG 932

Query: 454  MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            MHG G EA+  F  M  +G+KP+ ITF  +L ACSH+GL+ EG   F+ M+    + PK+
Sbjct: 933  MHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECNMEPKL 992

Query: 514  EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
            EHY CMVDLL R G L +A+ +I++MP++P+  +WGALL   ++H +  + E  A  + E
Sbjct: 993  EHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVAEHVFE 1052

Query: 574  IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            +EP N GY VL++NIYA A +W +V  +R  + +  +KK PG S +EV G    F+
Sbjct: 1053 LEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWIEVQGKFTTFV 1108



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 161/599 (26%), Positives = 280/599 (46%), Gaps = 33/599 (5%)

Query: 2   KIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRY--------NSLVTSYIKNNKPS 53
           K +N F+  +Q         + +F  SY ++    TR         N+ +  + +     
Sbjct: 383 KPRNCFIFFQQPS-------RKYFLSSYLDVPRSSTRVGAFAKLDENTKICKFCEVGDLR 435

Query: 54  SALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALI 113
           +A+ +    +K  SE+D     +IL+ CA+      GK +H     NG+  +  +   L+
Sbjct: 436 NAVELLRMSQK--SELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLV 493

Query: 114 QMYSECGSLVSARYLFDE-MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSE 172
            MY  CG+L   R +FD  + +  V  W+ M+  Y + G   E++ + ++M+ + I  + 
Sbjct: 494 FMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNS 553

Query: 173 VAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYA 228
                ++  FA +  V   K IH CV       KLG      +  +LI  Y K G +  A
Sbjct: 554 YTFSCILKCFATLGRVGECKRIHGCVY------KLGFGSYNTVVNSLIATYFKSGEVDSA 607

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
            +LF+ L    VVSW  MISG +     +  +  F +M+   V     T+++ +  C  V
Sbjct: 608 HKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANV 667

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
           G L LG+ LH   ++  F   +   N L+DMY KC  +  A   F+ M  K V+ W ++I
Sbjct: 668 GSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLI 727

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
           +AY +    D A  LF  M+   V P+  +M  +L  C    +L+ G+ +H YI K  + 
Sbjct: 728 AAYVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMA 787

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
           + + +  AL+DMYAKCG +  AY +FS+   +DI  WN M+ GY  +    EAL  F +M
Sbjct: 788 LCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEM 847

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
           ++   +P+GIT   LL AC     +  G+ +   ++   G   ++     ++D+  + G 
Sbjct: 848 QKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRN-GYSSELHVANALIDMYVKCGS 905

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLH--KNPSMGEIAATQILEIEPQNYGYNVLM 585
           L  A  +   +P + ++I W  +++   +H   N ++      +I  I+P    +  ++
Sbjct: 906 LVHARLLFDMIPEK-DLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSIL 963


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 224/598 (37%), Positives = 337/598 (56%), Gaps = 8/598 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N LV  Y K      AL +Y  +   G   D +T P++L++CA  +    G+E+H 
Sbjct: 100 LFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHA 159

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             ++   D D  V NALI MY +CG +VSAR LFD+MP RD +SW+ MI GY       E
Sbjct: 160 HVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLE 219

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            LE+   MR + I P  + M S++S    + D  LG  +H+ VVR   D    +++  +L
Sbjct: 220 GLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGN--ISVYNSL 277

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I MY   G+   A+ +F+ +    VVSWT +ISG +     ++ +  +  M      P E
Sbjct: 278 IQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDE 337

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +TI S++  C  +G L +G  LH    R G    + +AN+L+DMY KC+ I  A  +F  
Sbjct: 338 VTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQ 397

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFE--LFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           +  KDV+ W +VI+        ++ FE  +F    + K +PN VT++  LS C   GAL 
Sbjct: 398 IPDKDVISWTSVINGL---RINNRCFEALIFFRKMILKSKPNSVTLISALSACARVGALM 454

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            GK +H +  K G+  D  L  A++D+Y +CG +  A   F+    +D+  WN ++ GY 
Sbjct: 455 CGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFNLN-EKDVGAWNILLTGYA 513

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
             G G   +  F  M  S + P+ +TFI LL ACS +G+VTEG   F +M     + P +
Sbjct: 514 QKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNL 573

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           +HY C+VDLLGRAG L+EAHE I+ MP++P+  +WGALL A ++H++  +GE+AA  I +
Sbjct: 574 KHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFK 633

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            + ++ GY +L+ N+YA + +W++VA VRR MKE  +  +PG S VEV G VH F+ G
Sbjct: 634 QDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSG 691



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/392 (33%), Positives = 218/392 (55%), Gaps = 3/392 (0%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           + NAL+ M+   G + +A  +F  M  RD+ SW+ ++ GY + G  +EAL +   + +  
Sbjct: 71  LGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAG 130

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
           IRP      S++   A   D+  G+ +HA VVR   D  + V +  ALI MY KCG++  
Sbjct: 131 IRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRF--DFDMDVDVVNALITMYVKCGDVVS 188

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A+ LF+++     +SW  MISGY   +E  EG+ LF  M E ++ P  +T+ S+I  C  
Sbjct: 189 ARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACEL 248

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
           +G  +LG  LH+Y++R  ++ ++++ N+L+ MY      + A ++F GM+ +DV+ W  +
Sbjct: 249 LGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTI 308

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           IS        DKA E +  M+++   P+EVT+  +LS C   G L+MG  LH   E+ G 
Sbjct: 309 ISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGH 368

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
            + V++  +L+DMY+KC  +  A  +F +   +D+  W +++ G  ++    EALIFF  
Sbjct: 369 ILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRK 428

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           M     KPN +T I  L+AC+  G +  GK +
Sbjct: 429 MILKS-KPNSVTLISALSACARVGALMCGKEI 459



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 142/480 (29%), Positives = 245/480 (51%), Gaps = 38/480 (7%)

Query: 6   GFLNLEQTRQCHAHIIKTHFKFSYTNIINPL---------------------TR----YN 40
           G ++L + R+ HAH+++  F     +++N L                     TR    +N
Sbjct: 147 GAMDLVRGREVHAHVVRFDFDMD-VDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWN 205

Query: 41  SLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
           ++++ Y +N++    L ++  MR+   + D  T+ +++ AC  +    LG ++H + ++ 
Sbjct: 206 AMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRT 265

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
             DG+  V N+LIQMY   G    A  +F  M  RDVVSW+T+I G     LP++ALE  
Sbjct: 266 AYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETY 325

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
           + M      P EV + S++S  A +  +D+G  +H    R      L V +A +LIDMYS
Sbjct: 326 KTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERT--GHILYVVVANSLIDMYS 383

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           KC  +  A ++F+++    V+SWT +I+G    N   E +  F +MI ++  P+ +T++S
Sbjct: 384 KCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKSK-PNSVTLIS 442

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
            +  C  VG L  GK +HA+ L+ G  F   + NA++D+Y +C  +R+A   F+ +  KD
Sbjct: 443 ALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQFN-LNEKD 501

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           V  WN +++ YAQ        ELF  M  S++ P++VT + LL  C+ +G +  G     
Sbjct: 502 VGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGL---E 558

Query: 401 YIEKQGLEVDVI--LK--TALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
           Y ++  +   +   LK    +VD+  + G +N A+       I  D  +W A++    +H
Sbjct: 559 YFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIH 618



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/483 (24%), Positives = 236/483 (48%), Gaps = 15/483 (3%)

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           E+AL+ +  M+ + I   E   ++++ L  +      G+ +   V+ +     L V +  
Sbjct: 15  EQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLSSLV-TLLSVRLGN 73

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+ M+ + G++  A  +F R+ +  + SW V++ GY +    +E + L+  ++   + P
Sbjct: 74  ALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRP 133

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T  S++  C     L  G+ +HA+++R  F+  + + NAL+ MY KC ++ SAR LF
Sbjct: 134 DVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLF 193

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           D M ++D + WNA+IS Y +     +  ELF  M+   + P+ +TM  ++S C   G   
Sbjct: 194 DKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDER 253

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           +G  LH+Y+ +   + ++ +  +L+ MY   G    A  +FS    RD+  W  +++G  
Sbjct: 254 LGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCV 313

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +   ++AL  +  ME +G  P+ +T   +L+AC+  G +  G  + + +    G +  +
Sbjct: 314 DNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHE-LAERTGHILYV 372

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ-IL 572
                ++D+  +   +++A E+   +P + ++I W +++   +++       I   + IL
Sbjct: 373 VVANSLIDMYSKCKRIEKALEIFHQIPDK-DVISWTSVINGLRINNRCFEALIFFRKMIL 431

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR---VKKEPGFSSVEVNGLVHKFI 629
           + +P +     L+S + A A       G     KEI    +K   GF     N ++  ++
Sbjct: 432 KSKPNSV---TLISALSACAR-----VGALMCGKEIHAHALKAGMGFDGFLPNAILDLYV 483

Query: 630 RGG 632
           R G
Sbjct: 484 RCG 486


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 215/594 (36%), Positives = 335/594 (56%), Gaps = 3/594 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMR-KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           + +L++ Y+  N  S AL ++  MR ++G  +D F +    KAC      + G+ +HG+A
Sbjct: 83  WTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYA 142

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K GL    +V +AL+ MY++ G +   R +F EMP R+VVSW+ +I G  R G  +EAL
Sbjct: 143 VKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEAL 202

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
               EM    +          +   AD   ++ G+ IHA  ++   D  +   +A  L  
Sbjct: 203 VYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFD--VSSFVANTLAT 260

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+KCG L Y   LF +++   VVSWT +I+  ++  +    V+ F  M E +V P+E T
Sbjct: 261 MYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYT 320

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             ++I  C  +  ++ G+ LHA IL  G   SL++ N+++ MY KC ++ S+  +F  M 
Sbjct: 321 FAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMT 380

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +D++ W+ +I+ Y Q   + +AFEL   M++   +P E  +  +LS C     LE GK 
Sbjct: 381 RRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQ 440

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH Y+   GLE   ++ +AL++MY KCG +  A R+F  A   DI  W AM+ GY  HG 
Sbjct: 441 LHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGY 500

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
             E +  F  + R G++P+ +TFIG+L+ACSHAGLV  G   F+ M     + P  EHYG
Sbjct: 501 SREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYG 560

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CM+DLL RAG L +A  MI++MP   + +VW  LL A ++H +   G   A +IL++EP 
Sbjct: 561 CMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPN 620

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             G ++ ++NIYA   +W + A +R++MK   V KEPG+S ++V  LV  F+ G
Sbjct: 621 CAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAG 674



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 222/449 (49%), Gaps = 13/449 (2%)

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI 168
           SN  ++   + G L +AR +FD+M  +D +SW+T+I GY       EAL + + MR    
Sbjct: 52  SNKQLKELVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESG 111

Query: 169 RPSEVAMISMVSLFADV-ADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
              +  ++S+      + +DV+ G+ +H   V+        V + +AL+DMY+K G +  
Sbjct: 112 LRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNS--VFVGSALLDMYTKNGKIFE 169

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
            +++F+ +   +VVSWT +I+G +R     E +  F+EM    V     T    +  C  
Sbjct: 170 GRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACAD 229

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
            G L  G+ +HA  ++ GF+ S  +AN L  MY KC ++    TLF+ M  +DV+ W  +
Sbjct: 230 SGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTI 289

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           I+   Q    + A + FI M+ S V PNE T   ++S C     +E G+ LH  I   GL
Sbjct: 290 ITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGL 349

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
              + ++ +++ MYAKCG +  +  +F E   RDI  W+ ++AGY   G   EA      
Sbjct: 350 AASLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSW 409

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG----CMVDLL 523
           M   G KP       +L+AC +  ++  GK      +H   L   +EH       ++++ 
Sbjct: 410 MRMEGPKPTEFALASVLSACGNMAILEHGKQ-----LHAYVLSIGLEHTAMVLSALINMY 464

Query: 524 GRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
            + G ++EA  +  +     +++ W A++
Sbjct: 465 CKCGSIEEASRIFDAAE-NDDIVSWTAMI 492



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 168/334 (50%), Gaps = 3/334 (0%)

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           K G+L  A+++F++++Q   +SWT +ISGY+  N+ +E + LF  M  E+    +  ILS
Sbjct: 61  KTGHLGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILS 120

Query: 281 LIIE-CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           L  + CG    +  G+ LH Y ++ G   S+ + +AL+DMY K  +I   R +F  M  +
Sbjct: 121 LAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMR 180

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           +V+ W A+I+   +A    +A   F  M  S+V  +  T    L  C ++GAL  G+ +H
Sbjct: 181 NVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIH 240

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
               K+G +V   +   L  MY KCG +     LF +   RD+  W  ++      G  E
Sbjct: 241 AQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEE 300

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
            A+  F+ M  S V PN  TF  +++ C++   +  G+ +   ++H LGL   +     +
Sbjct: 301 CAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILH-LGLAASLSVENSI 359

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           + +  + G L  +  +   M  R +++ W  ++A
Sbjct: 360 MTMYAKCGQLTSSSVIFHEMT-RRDIVSWSTIIA 392



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 139/289 (48%), Gaps = 27/289 (9%)

Query: 28  SYTNIINPLTR-----YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACA 82
           S + I + +TR     +++++  Y +    S A  + ++MR  G +   F + ++L AC 
Sbjct: 371 SSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACG 430

Query: 83  QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
            + +   GK++H + +  GL+  A V +ALI MY +CGS+  A  +FD   N D+VSW+ 
Sbjct: 431 NMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTA 490

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           MI GY   G   E +++  ++  + +RP  V  I ++S  +    VDLG   H     N 
Sbjct: 491 MINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLG--FH---YFNA 545

Query: 203 KDEKLGVAIAT----ALIDMYSKCGNLAYAKQLFNRL--NQNSVVSWTVMISGYIRCNEI 256
             +K  ++ +      +ID+  + G L+ A+ +   +  +++ VV W+ ++       ++
Sbjct: 546 MSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVV-WSTLLRACRVHGDV 604

Query: 257 NEGVRLFAEM--IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
             G R    +  +E N   + IT+ ++            GKW  A  +R
Sbjct: 605 ERGRRTAERILQLEPNCAGTHITLANIYA--------SKGKWREAADIR 645


>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 597

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/543 (38%), Positives = 325/543 (59%), Gaps = 7/543 (1%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSEC---GSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
            IH   + NG   +  +S  LI   + C    ++  AR +FD+MP RDV  W+T+IRGY 
Sbjct: 47  RIHALVVTNGCGQNLLLSTKLI--ITACCLAPTMDYARKMFDQMPKRDVFLWNTLIRGYA 104

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
             G  EEAL +   M    + P       +V   A ++ +  GK +H  +V++  D    
Sbjct: 105 DAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFDSD-- 162

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V + ++L+ MYS+ G     + +F  +   ++VSWT +I+GY++     EG+ +F EM+ 
Sbjct: 163 VFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVG 222

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
               P+ +T++S++  C  +  L LGK +H Y ++ G +  +++ NAL+ +YGKC  + +
Sbjct: 223 SGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVET 282

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           AR+LFDGM  ++++ WNA+I+AY Q +    A +LF  M+  KV  + +TMV ++S C  
Sbjct: 283 ARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACAS 342

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
            GAL  G+W+H  ++++GLE++V +  AL+DMYAKCG+++ A  +F     R +  W +M
Sbjct: 343 LGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSM 402

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +     HG GE+AL  F  M+  GVKPN  TF  +  AC H+GLV EG+  F+ M+    
Sbjct: 403 IGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYS 462

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
           ++P +EH  CMVDLLGRAG L EA+E I  MP+ P++ VWGALL + ++H N  + E+ A
Sbjct: 463 IMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVA 522

Query: 569 TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            ++  ++PQ   + VLMSNIYA A RW D A +R++M+E  +KK PG S VEVN   H F
Sbjct: 523 EKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSLVEVNRRFHTF 582

Query: 629 IRG 631
           + G
Sbjct: 583 LSG 585



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 141/454 (31%), Positives = 236/454 (51%), Gaps = 16/454 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+  Y        AL +Y+ M   G   DN+T P ++++CA +     GKE+H   +
Sbjct: 96  WNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIV 155

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G D D +V ++L+ MYS+ G  +    +F EM  R++VSW+ +I GY +    +E L 
Sbjct: 156 KHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLG 215

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V REM     +P+ V ++S++   A +  ++LGK IH   ++   D    V++  ALI +
Sbjct: 216 VFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPD--VSLTNALIAL 273

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCGN+  A+ LF+ +   ++VSW  MI+ Y + N     V+LF  M  E V    IT+
Sbjct: 274 YGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITM 333

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +S+I  C  +G L  G+W+H  + R G E ++++ NAL+DMY KC  I  AR +F+ +  
Sbjct: 334 VSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPC 393

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KW 397
           + V+ W ++I A A     + A +LF  MK   V+PN  T   + + C  +G +E G K 
Sbjct: 394 RSVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKH 453

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
             + +    +   V     +VD+  + G +  AY    +  +  D+ +W A++    +H 
Sbjct: 454 FESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHS 513

Query: 457 CGEEA-----LIFFVDMERSGVKPNGITFIGLLN 485
             E A      +F +D       P  +TF  L++
Sbjct: 514 NLELAELVAEKLFLLD-------PQTVTFYVLMS 540



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 203/384 (52%), Gaps = 15/384 (3%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           ++  +  + +++  Y++N      L ++  M  +G++ +  T+ ++L ACA +   +LGK
Sbjct: 190 VVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGK 249

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            IHG+ IK G+D D  ++NALI +Y +CG++ +AR LFD M  +++VSW+ MI  Y +  
Sbjct: 250 LIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNN 309

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
               A+++ R M+   +    + M+S++S  A +  ++ G+ +H  V R  K  ++ V+I
Sbjct: 310 AGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKR--KGLEINVSI 367

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
             ALIDMY+KCGN+  A+++F RL   SVVSWT MI          + ++LF+ M +E V
Sbjct: 368 TNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGEDALKLFSRMKDEGV 427

Query: 272 FPSEITILSLIIECGFVGGLQLGK-----WLHAYILRNGFEFSLAMANALVDMYGKCREI 326
            P+  T  ++   C   G ++ G+      +  Y +  G E    M    VD+ G+   +
Sbjct: 428 KPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACM----VDLLGRAGSL 483

Query: 327 RSARTLFDGMK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS- 384
             A    D M    DV +W A++ +  + H   +  EL +  K+  + P  VT   L+S 
Sbjct: 484 MEAYEFIDKMPVEPDVSVWGALLGS-CRIHSNLELAEL-VAEKLFLLDPQTVTFYVLMSN 541

Query: 385 LCTEAGALEMGKWLHTYIEKQGLE 408
           +  EAG  E    L   +E++ L+
Sbjct: 542 IYAEAGRWEDAARLRKLMEERELK 565


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 209/598 (34%), Positives = 342/598 (57%), Gaps = 11/598 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMR-KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           + ++++ Y+     + AL++++ M  + G  +D F +   LKAC   +    G+ +HG++
Sbjct: 35  WTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSLALKACGLNMSVSFGESLHGYS 94

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K       +V +AL+ MY + G +     +F EMP R+VVSW+ +I G  R G  +EAL
Sbjct: 95  VKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEAL 154

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IAT 213
               +M    +        S +   AD   ++ G+ IH      C+  K G      +A 
Sbjct: 155 AYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIH------CQTLKKGFTAVSFVAN 208

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
            L  MY+KCG L Y  +LF  + Q  VVSWT +I   ++  +    V+ F  M E +V P
Sbjct: 209 TLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSP 268

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +E T  ++I  C  +G ++ G+ LHA+++R G   SL++AN+++ MY KC ++  A T+F
Sbjct: 269 NEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVF 328

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
            G+  +D++ W+ +IS YAQ  C ++AF+    M+    RPNE     +LS+C     LE
Sbjct: 329 QGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILE 388

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            GK LH ++   GLE + ++++AL++MY+KCG +  A ++F EA Y +I  W AM+ GY 
Sbjct: 389 QGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYA 448

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            HG  +EA+  F  + + G++P+ +TFI +L ACSHAGLV  G   F+ +     + P  
Sbjct: 449 EHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSK 508

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           +HYGCM+DLL RAG L++A  MI+SMP + + +VW  LL A ++H +   G+ AA +IL+
Sbjct: 509 DHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQ 568

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           ++P     ++ ++N+YA   +W + A VR++MK   V KEPG+S ++    V  F+ G
Sbjct: 569 LDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWSWIKFKDRVSAFVSG 626



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 223/453 (49%), Gaps = 11/453 (2%)

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
           N +++   + G L +AR LFD+M  RD +SW+T+I GY  G    EAL +  +M    + 
Sbjct: 5   NLVLKNLVKTGHLNNARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMW---VE 61

Query: 170 PSEVAMISMVSLFADVA----DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
           P       ++SL          V  G+++H   V+   D    V + +AL+DMY K G +
Sbjct: 62  PGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKT--DFVNSVFVGSALVDMYMKIGKV 119

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
                +F  +   +VVSWT +I+G +R     E +  F++M  + V     T  S +  C
Sbjct: 120 DEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKAC 179

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
              G L  G+ +H   L+ GF     +AN L  MY KC ++     LF+ M  +DV+ W 
Sbjct: 180 ADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWT 239

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
            +I +  Q    + A + F  M+ + V PNE T   ++S C   G +E G+ LH ++ ++
Sbjct: 240 TIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRR 299

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
           GL   + +  +++ MY+KC  ++ A  +F     RDI  W+ M++GY   GCGEEA  + 
Sbjct: 300 GLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYL 359

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
             M R G +PN   F  +L+ C +  ++ +GK +   ++  +GL         ++++  +
Sbjct: 360 SWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVL-CVGLEQNTMVQSALINMYSK 418

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            G + EA ++        N++ W A++     H
Sbjct: 419 CGSIKEASKIFDEAEYN-NIVSWTAMINGYAEH 450



 Score = 42.4 bits (98), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 64/167 (38%), Gaps = 34/167 (20%)

Query: 10  LEQTRQCHAHI------------------------IKTHFKFSYTNIINPLTRYNSLVTS 45
           LEQ +Q HAH+                        IK   K       N +  + +++  
Sbjct: 387 LEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMING 446

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL--- 102
           Y ++     A++++  + K G   D+ T   +L AC+   +  LG   H F   + +   
Sbjct: 447 YAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLG--FHYFNSLSKVHQI 504

Query: 103 --DGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMIRG 146
               D Y    +I +    G L  A  +   MP  RD V WST++R 
Sbjct: 505 CPSKDHY--GCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRA 549


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 208/593 (35%), Positives = 351/593 (59%), Gaps = 3/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           Y+ ++  Y KN+    AL  +  M  +   +       +L+ C + L    G+EIHG  I
Sbjct: 113 YHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLII 172

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            NG + + +V  A++ +Y++C  + +A  +F+ M ++D+VSW+T++ GY + G  + AL+
Sbjct: 173 TNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQ 232

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++ +M+    +P  V ++S++   AD+  + +G++IH    R+   E L V +  AL+DM
Sbjct: 233 LVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRS-GFESL-VNVTNALLDM 290

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCG+   A+ +F  +   +VVSW  MI G  +  E  E    F +M++E   P+ +T+
Sbjct: 291 YFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTM 350

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           + +++ C  +G L+ G ++H  + +   + ++++ N+L+ MY KC+ +  A ++F+ ++ 
Sbjct: 351 MGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEK 410

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            +V  WNA+I  YAQ  C+ +A  LF  M+   ++ +  T+VG+++   +       KW+
Sbjct: 411 TNV-TWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWI 469

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    +  ++ +V + TALVDMYAKCG +  A +LF     R +  WNAM+ GYG HG G
Sbjct: 470 HGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGVG 529

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +E L  F +M++  VKPN ITF+ +++ACSH+G V EG  +F  M     L P ++HY  
Sbjct: 530 KETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSA 589

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLLGRAG LD+A   I+ MP++P + V GA+L A K+HKN  +GE AA ++ +++P  
Sbjct: 590 MVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDE 649

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            GY+VL++NIYA  + W+ VA VR  M++  + K PG S VE+   +H F  G
Sbjct: 650 GGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWVELRNEIHTFYSG 702



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/444 (30%), Positives = 232/444 (52%), Gaps = 10/444 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + +LV  Y +N     AL +   M++ G + D+ T+ +IL A A +    +G+ IHG
Sbjct: 211 LVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHG 270

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +A ++G +    V+NAL+ MY +CGS   AR +F  M ++ VVSW+TMI G  + G  EE
Sbjct: 271 YAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEE 330

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A     +M      P+ V M+ ++   A++ D++ G  +H  + +   D    V++  +L
Sbjct: 331 AFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSN--VSVMNSL 388

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I MYSKC  +  A  +FN L + + V+W  MI GY +   + E + LF  M  + +    
Sbjct: 389 ISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDC 447

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T++ +I         +  KW+H   +R   + ++ ++ ALVDMY KC  I++AR LFD 
Sbjct: 448 FTLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDM 507

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M+ + V+ WNA+I  Y       +  +LF  M+   V+PN++T + ++S C+ +G +E G
Sbjct: 508 MQERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEG 567

Query: 396 KWLHTYI-EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYG 453
             L   + E   LE  +   +A+VD+  + G ++ A+    E  I   I +  AM+    
Sbjct: 568 LLLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACK 627

Query: 454 MHG---CGEEAL--IFFVDMERSG 472
           +H     GE+A   +F +D +  G
Sbjct: 628 IHKNVELGEKAAQKLFKLDPDEGG 651



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 92/152 (60%)

Query: 29  YTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH 88
           + N+      +N+++  Y +N     ALN++  M+  G ++D FT+  ++ A A   +  
Sbjct: 405 FNNLEKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNR 464

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
             K IHG A++  +D + +VS AL+ MY++CG++ +AR LFD M  R V++W+ MI GY 
Sbjct: 465 QAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYG 524

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
             G+ +E L++  EM+   ++P+++  +S++S
Sbjct: 525 THGVGKETLDLFNEMQKGAVKPNDITFLSVIS 556



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 41/189 (21%), Positives = 82/189 (43%), Gaps = 13/189 (6%)

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
           ++V  +    V LL  CT    L     +  +I K G   + + +T ++ ++ K G  + 
Sbjct: 41  TRVYSHRHPSVVLLENCTSKKELYQ---ILPFIIKNGFYNEHLFQTKVISLFCKFGSNSE 97

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A R+F     +   +++ M+ GY  +    +AL FF+ M    V+     +  LL  C  
Sbjct: 98  AARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGE 157

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
              + +G+      +HGL +    E        ++ L  +   +D A++M + M  + ++
Sbjct: 158 NLDLKKGRE-----IHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHK-DL 211

Query: 546 IVWGALLAA 554
           + W  L+A 
Sbjct: 212 VSWTTLVAG 220


>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  414 bits (1063), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/649 (34%), Positives = 355/649 (54%), Gaps = 78/649 (12%)

Query: 20  IIKTHFKFS-YTNIINPLT-RYNSLVTSYIK-NNKPSSALNIYAFMRKNGSEVDNFTIPT 76
           ++  H+    + ++ NP T  +N+++ +++   N P  AL  Y     + ++ D++T P 
Sbjct: 51  LVPFHYSLRIFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPI 110

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +L+ CA  +    G+++H  A+ +G DGD YV N L+ +Y+ CGS+ SAR +F+E P  D
Sbjct: 111 LLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLD 170

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           +VSW+T++ GY + G  EEA  V   M       + +A  SM++LF              
Sbjct: 171 LVSWNTLLAGYVQAGEVEEAERVFEGMP----ERNTIASNSMIALFG------------- 213

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFN--RLNQNSVVSWTVMISGYIRCN 254
                                   + G +  A+++FN  R  +  +VSW+ M+S Y +  
Sbjct: 214 ------------------------RKGCVEKARRIFNGVRGRERDMVSWSAMVSCYEQNE 249

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
              E + LF EM    V   E+ ++S +  C  V  +++G+W+H   ++ G E  +++ N
Sbjct: 250 MGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKN 309

Query: 315 ALVDMYGKCREIRSARTLFD--------------------------------GMKSKDVM 342
           AL+ +Y  C EI  AR +FD                                 M  KDV+
Sbjct: 310 ALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVV 369

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
            W+A+IS YAQ  C  +A  LF  M++  VRP+E  +V  +S CT    L++GKW+H YI
Sbjct: 370 SWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLDLGKWIHAYI 429

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
            +  L+V+VIL T L+DMY KCG V  A  +F     + +  WNA++ G  M+G  E++L
Sbjct: 430 SRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVSTWNAVILGLAMNGSVEQSL 489

Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDL 522
             F DM+++G  PN ITF+G+L AC H GLV +G+  F+ M+H   +   I+HYGCMVDL
Sbjct: 490 NMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDL 549

Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYN 582
           LGRAGLL EA E+I SMP+ P++  WGALL A + H++  MGE    ++++++P + G++
Sbjct: 550 LGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKLIQLQPDHDGFH 609

Query: 583 VLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           VL+SNIYA    W +V  +R +M +  V K PG S +E NG VH+F+ G
Sbjct: 610 VLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAG 658


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/592 (34%), Positives = 346/592 (58%), Gaps = 5/592 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++  Y K  +   +L ++A MR+     D + + ++L AC+ +     GK+IH + +
Sbjct: 106 WTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVL 165

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G + D  V N LI  Y++C  + + R LFD+M  ++++SW+TMI GY +     EA++
Sbjct: 166 RRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMK 225

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALID 217
           +  EM  +  +P   A  S+++    +  ++ G+ +HA  ++ N +  +    +   LID
Sbjct: 226 LFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEF---VKNGLID 282

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+K   L  AK++F+ + + +V+S+  MI GY    +++E + LF EM      PS +T
Sbjct: 283 MYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLT 342

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
            +SL+     +  L+L K +H  I++ G    L   +AL+D+Y KC  ++ AR +F+ M 
Sbjct: 343 FVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMN 402

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KD+++WNA+   Y Q    ++A +L+  ++ S+ +PNE T   L++  +   +L  G+ 
Sbjct: 403 EKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQ 462

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
            H  + K GL+    +  ALVDMYAKCG +  A ++F+ +I+RD+  WN+M++ +  HG 
Sbjct: 463 FHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGE 522

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            EEAL  F +M + G++PN +TF+ +L+ACSHAG V +G + F+ M  G G+ P  EHY 
Sbjct: 523 AEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSM-PGFGIKPGTEHYA 581

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           C+V LLGR+G L EA E I+ MP+ P  IVW +LL+A ++  N  +G+ AA   +  +P+
Sbjct: 582 CVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPK 641

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           + G  +L+SNI+A    W DV  VR  M    V KEPG S +EVN  V+ FI
Sbjct: 642 DSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFI 693



 Score =  304 bits (779), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 160/497 (32%), Positives = 281/497 (56%), Gaps = 6/497 (1%)

Query: 63  RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSL 122
           RK+G   + F + ++++AC Q+ +   G ++HGF +++G D D YV  +LI  YS+ G +
Sbjct: 29  RKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBI 88

Query: 123 VSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLF 182
             AR +FD++  +  V+W+T+I GY + G    +LE+  +MR  ++ P    + S++S  
Sbjct: 89  EVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSAC 148

Query: 183 ADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVS 242
           + +  ++ GK IHA V+R  +  ++ V++   LID Y+KC  +   ++LF+++   +++S
Sbjct: 149 SMLEFLEGGKQIHAYVLR--RGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIIS 206

Query: 243 WTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYIL 302
           WT MISGY++ +   E ++LF EM      P      S++  CG +  L+ G+ +HAY +
Sbjct: 207 WTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTI 266

Query: 303 RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
           +   E +  + N L+DMY K   +  A+ +FD M  ++V+ +NA+I  Y+    + +A E
Sbjct: 267 KANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALE 326

Query: 363 LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYA 422
           LF  M+V    P+ +T V LL +     ALE+ K +H  I K G+ +D+   +AL+D+Y+
Sbjct: 327 LFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYS 386

Query: 423 KCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
           KC  V  A  +F E   +DI +WNAM  GY  H   EEAL  +  ++ S  KPN  TF  
Sbjct: 387 KCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAA 446

Query: 483 LLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
           L+ A S+   +  G+   +++V  GL   P + +   +VD+  + G ++EA +M  S   
Sbjct: 447 LITAASNLASLRHGQQFHNQLVKMGLDFCPFVTN--ALVDMYAKCGSIEEARKMFNSSIW 504

Query: 542 RPNMIVWGALLAASKLH 558
           R +++ W ++++    H
Sbjct: 505 R-DVVCWNSMISTHAQH 520



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 243/477 (50%), Gaps = 12/477 (2%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           ++  +  + ++++ Y++N+    A+ ++  M + G + D F   ++L +C  +     G+
Sbjct: 200 VVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGR 259

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           ++H + IK  L+ + +V N LI MY++   L  A+ +FD M  ++V+S++ MI GY    
Sbjct: 260 QVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQE 319

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
              EALE+  EMR     PS +  +S++ + A +  ++L K IH  ++      K GV++
Sbjct: 320 KLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLII------KXGVSL 373

Query: 212 ----ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
                +ALID+YSKC  +  A+ +F  +N+  +V W  M  GY +  E  E ++L++ + 
Sbjct: 374 DLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQ 433

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
                P+E T  +LI     +  L+ G+  H  +++ G +F   + NALVDMY KC  I 
Sbjct: 434 FSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIE 493

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            AR +F+    +DV+ WN++IS +AQ    ++A  +F  M    ++PN VT V +LS C+
Sbjct: 494 EARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACS 553

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWN 446
            AG +E G      +   G++        +V +  + G +  A     +  I     +W 
Sbjct: 554 HAGXVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWR 613

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
           ++++   + G  E    +  +M  S    +  ++I L N  +  G+  + K V D+M
Sbjct: 614 SLLSACRIAGNVELGK-YAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRM 669



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 226/448 (50%), Gaps = 25/448 (5%)

Query: 151 GLPEEALEVMREMRFMDIR------PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
           G  EEAL     M F+D++      P+E  + S++     +  V+ G  +H  VVR+  D
Sbjct: 15  GYSEEAL-----MVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFD 69

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
           +   V + T+LID YSK GB+  A+ +F++L + + V+WT +I+GY +C      + LFA
Sbjct: 70  QD--VYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFA 127

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           +M E NV P    + S++  C  +  L+ GK +HAY+LR G E  +++ N L+D Y KC 
Sbjct: 128 QMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCN 187

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            +++ R LFD M  K+++ W  +IS Y Q     +A +LF  M     +P+      +L+
Sbjct: 188 RVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLT 247

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
            C    ALE G+ +H Y  K  LE +  +K  L+DMYAK   +  A ++F     +++  
Sbjct: 248 SCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVIS 307

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           +NAM+ GY       EAL  F +M      P+ +TF+ LL   +    +        K +
Sbjct: 308 YNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALE-----LSKQI 362

Query: 505 HGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH-K 559
           HGL    G+   +     ++D+  +   + +A  + + M    +++VW A+      H +
Sbjct: 363 HGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMN-EKDIVVWNAMFFGYTQHLE 421

Query: 560 NPSMGEIAAT-QILEIEPQNYGYNVLMS 586
           N    ++ +T Q    +P  + +  L++
Sbjct: 422 NEEALKLYSTLQFSRQKPNEFTFAALIT 449



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 184/368 (50%), Gaps = 31/368 (8%)

Query: 10  LEQTRQCHAHIIKTHFK------------FSYTNIINPLTR------------YNSLVTS 45
           LEQ RQ HA+ IK + +            ++ +N++    +            YN+++  
Sbjct: 255 LEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEG 314

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
           Y    K S AL ++  MR         T  ++L   A +    L K+IHG  IK G+  D
Sbjct: 315 YSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLD 374

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
            +  +ALI +YS+C  +  AR++F+EM  +D+V W+ M  GY +    EEAL++   ++F
Sbjct: 375 LFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQF 434

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
              +P+E    ++++  +++A +  G+  H  +V+   D      +  AL+DMY+KCG++
Sbjct: 435 SRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLD--FCPFVTNALVDMYAKCGSI 492

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
             A+++FN      VV W  MIS + +  E  E + +F EM++E + P+ +T ++++  C
Sbjct: 493 EEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSAC 552

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMAN--ALVDMYGKCREIRSARTLFDGMK-SKDVM 342
              G ++ G  L+ +    GF       +   +V + G+  ++  A+   + M      +
Sbjct: 553 SHAGXVEDG--LNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAI 610

Query: 343 IWNAVISA 350
           +W +++SA
Sbjct: 611 VWRSLLSA 618


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 218/607 (35%), Positives = 345/607 (56%), Gaps = 31/607 (5%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           LT +N+++ +Y + +    A  I+  M K G   DNFT  + L+ C  +     GK++H 
Sbjct: 140 LTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHS 199

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             I  G  GD +V NALI MY++C    S   +FDEM  R+ V+W+++I    + G   +
Sbjct: 200 KLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFND 259

Query: 156 ALEVMREMRFMD--IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           AL +   M+  +  I+P +    ++++L A+  + + G+ IHA ++R   +    + + T
Sbjct: 260 ALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIR--ANITKNIIVET 317

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
            L+ MYS+CG L YAK++FNR+ + +  SW  MI GY +  E  E +RLF +M    + P
Sbjct: 318 ELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKP 377

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              ++ S++  C  +   Q G+ LH +I+RN  E    +   LVDMY KC  +  A  ++
Sbjct: 378 DCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVY 437

Query: 334 DGM--KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           D    K ++  +WN++++ YA      ++F  F+ M  S +  + +TMV +++L      
Sbjct: 438 DQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNL------ 491

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
                              ++L+TALVDMY+KCG +  A  +F     ++I  WNAM++G
Sbjct: 492 -------------------LVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISG 532

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           Y  HGC +EALI + +M + G+ PN +TF+ +L+ACSH GLV EG  +F  M     +  
Sbjct: 533 YSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEA 592

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
           K EHY CMVDLLGRAG L++A E ++ MP+ P +  WGALL A ++HK+  MG +AA ++
Sbjct: 593 KAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRL 652

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            E++PQN G  V+MSNIYA A RW +V  +R++MK   VKK+PG S +E+N  +  F  G
Sbjct: 653 FELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFHAG 712

Query: 632 GMVNWKS 638
              + K+
Sbjct: 713 SKTHPKT 719



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 221/427 (51%), Gaps = 23/427 (5%)

Query: 171 SEVAMISMVSLFADVADVD---LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCG---N 224
           S+V  +   SL  D  D +    GK+IH  ++ N  +      + T ++ +Y++ G   +
Sbjct: 67  SDVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPD--AYLMTKILMLYARSGCLDD 124

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           L YA++LF  + + ++ +W  MI  Y R ++  E   +F  M++  V P   T  S +  
Sbjct: 125 LCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRV 184

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
           CG +     GK +H+ ++  GF+    + NAL+DMY KC +  S   +FD M  ++ + W
Sbjct: 185 CGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTW 244

Query: 345 NAVISAYAQAHCIDKAFELFIHMKVSK--VRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
           N++ISA AQ    + A  LF+ M+ S+  ++P++ T   LL+LC        G+ +H ++
Sbjct: 245 NSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHL 304

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
            +  +  ++I++T LV MY++CG +N A  +F+    R+   WN+M+ GY  +G  +EAL
Sbjct: 305 IRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEAL 364

Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG----C 518
             F  M+ +G+KP+  +   +L++C     V+   S   + +H   +   +E  G     
Sbjct: 365 RLFKQMQLNGIKPDCFSLSSMLSSC-----VSLSDSQKGRELHNFIVRNTMEEEGILQVV 419

Query: 519 MVDLLGRAGLLDEAHEMI-KSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           +VD+  + G +D A ++  +++    N  +W ++LA    + N  + + +    LE+   
Sbjct: 420 LVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAG---YANKGLKKESFNHFLEMLES 476

Query: 578 NYGYNVL 584
           +  Y+VL
Sbjct: 477 DIEYDVL 483



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 179/370 (48%), Gaps = 55/370 (14%)

Query: 9   NLEQTRQCHAHIIKTHF------------------KFSYTN-IINPLTR-----YNSLVT 44
           N  Q RQ HAH+I+ +                   + +Y   I N +       +NS++ 
Sbjct: 293 NDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIE 352

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
            Y +N +   AL ++  M+ NG + D F++ ++L +C  +  +  G+E+H F ++N ++ 
Sbjct: 353 GYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEE 412

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEM--PNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
           +  +   L+ MY++CGS+  A  ++D+    +R+   W++++ GY   GL +E+     E
Sbjct: 413 EGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLE 472

Query: 163 MRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC 222
           M   DI    + M+++V+L                           + + TAL+DMYSKC
Sbjct: 473 MLESDIEYDVLTMVTIVNL---------------------------LVLETALVDMYSKC 505

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI 282
           G +  A+ +F+ +N  ++VSW  MISGY +     E + L+ EM ++ ++P+E+T L+++
Sbjct: 506 GAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAIL 565

Query: 283 IECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKD 340
             C   G ++ G  +   +  +   E        +VD+ G+   +  A+   + M    +
Sbjct: 566 SACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPE 625

Query: 341 VMIWNAVISA 350
           V  W A++ A
Sbjct: 626 VSTWGALLGA 635


>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 674

 Score =  413 bits (1062), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 216/596 (36%), Positives = 339/596 (56%), Gaps = 12/596 (2%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLGK 91
           + L  YN ++  Y+++     A+N++  M   G +   D +T P + KA  ++    LG 
Sbjct: 78  SSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGL 137

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            IHG  +++    D YV NAL+ MY   G +  AR +FD M NRDV+SW+TMI GY+R G
Sbjct: 138 VIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNG 197

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--V 209
              +AL +   M    + P    ++SM+ +   +  +++G+ +H  V    ++++LG  +
Sbjct: 198 YMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLV----EEKRLGDKI 253

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            +  AL++MY KCG +  A+ +F R+ +  V++WT MI+GYI   ++   + L   M  E
Sbjct: 254 EVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFE 313

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            V P+ +TI SL+  CG    L  GK LH + +R      + +  +L+ MY KC+ I   
Sbjct: 314 GVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLC 373

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             +F G        W+A+I+   Q   +  A +LF  M+   V PN  T+  LL      
Sbjct: 374 FRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATL 433

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS----EAIYRDICMW 445
             L     +H Y+ K G    +   T LV +Y+KCG +  A+++F+    +   +D+ +W
Sbjct: 434 ADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLW 493

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
            A+++GYGMHG G  AL  F++M RSGV PN ITF   LNACSH+GLV EG ++F  M+ 
Sbjct: 494 GALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLE 553

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
               + +  HY C+VDLLGRAG LDEA+ +I ++P  P   +WGALLAA   H+N  +GE
Sbjct: 554 HYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGE 613

Query: 566 IAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
           +AA ++ E+EP+N G  VL++NIYA   RW D+  VR +M+ + ++K+PG S++E+
Sbjct: 614 MAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTIEI 669



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 254/503 (50%), Gaps = 9/503 (1%)

Query: 61  FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECG 120
           F+R+  + +      ++L   A        K +H   I  G     ++ + L   Y+ CG
Sbjct: 5   FLRRAKNALSVKQYQSLLNHYAATQSISKTKALHCHVITGG-RVSGHILSTLSVTYALCG 63

Query: 121 SLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR--PSEVAMISM 178
            +  AR LFDEMP   ++S++ +IR Y R GL  +A+ V   M    I+  P       +
Sbjct: 64  HIAYARKLFDEMPQSSLLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFV 123

Query: 179 VSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
                ++  + LG  IH  ++R+     +   +  AL+ MY   G +  A+ +F+ +   
Sbjct: 124 AKAAGELKSISLGLVIHGRILRSWFG--MDKYVQNALLAMYMNFGRVEMARNVFDVMKNR 181

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
            V+SW  MISGY R   +N+ + +F  M+ E V P   TI+S++  CG + GL++G+ +H
Sbjct: 182 DVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVH 241

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
             +        + + NALV+MY KC  +  AR +F  M+ +DV+ W  +I+ Y +   ++
Sbjct: 242 KLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVE 301

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALV 418
            A EL   M+   VRPN VT+  L+S C +A  L  GK LH +  +Q +  D+I++T+L+
Sbjct: 302 NALELCRLMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLI 361

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
            MYAKC  ++  +R+FS A       W+A++AG   +    +AL  F  M R  V+PN  
Sbjct: 362 SMYAKCKHIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIA 421

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEM--- 535
           T   LL A +    + +  ++   +    G +  ++    +V +  + G L+ AH++   
Sbjct: 422 TLNSLLPAYATLADLRQTMNIHCYLTK-TGFMSSLDAATGLVHVYSKCGTLESAHKIFNG 480

Query: 536 IKSMPLRPNMIVWGALLAASKLH 558
           I+      ++++WGAL++   +H
Sbjct: 481 IQEKHKSKDVVLWGALISGYGMH 503


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/587 (35%), Positives = 339/587 (57%), Gaps = 2/587 (0%)

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           +  Y    +  +A  I+  M + G   +  T  ++L A +       GK +H   +  G 
Sbjct: 199 IGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGH 258

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
           + D  V  AL++MY++CGS    R +F+++ NRD+++W+TMI G   GG  EEA EV  +
Sbjct: 259 ESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQ 318

Query: 163 MRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC 222
           M+   + P+++  + +++   + A +  GK IH+ V +      +GV    ALI MYS+C
Sbjct: 319 MQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQ--NALISMYSRC 376

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI 282
           G++  A+ +F+++ +  V+SWT MI G  +     E + ++ EM +  V P+ +T  S++
Sbjct: 377 GSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSIL 436

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
             C     L+ G+ +H  ++  G      + N LV+MY  C  ++ AR +FD M  +D++
Sbjct: 437 NACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIV 496

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
            +NA+I  YA  +   +A +LF  ++   ++P++VT + +L+ C  +G+LE  + +HT +
Sbjct: 497 AYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLV 556

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
            K G   D  +  ALV  YAKCG  + A  +F +   R++  WNA++ G   HG G++AL
Sbjct: 557 RKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDAL 616

Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDL 522
             F  M+  GVKP+ +TF+ LL+ACSHAGL+ EG+  F  M     ++P IEHYGCMVDL
Sbjct: 617 QLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDL 676

Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYN 582
           LGRAG LDEA  +IK+MP + N  +WGALL A ++H N  + E AA   L+++  N    
Sbjct: 677 LGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVY 736

Query: 583 VLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           V +S++YA A  W+  A +R++M++  V KEPG S ++V   +H F+
Sbjct: 737 VALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFV 783



 Score =  315 bits (806), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 173/533 (32%), Positives = 285/533 (53%), Gaps = 6/533 (1%)

Query: 26  KFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVL 85
           K SY      +  +N++V  YI+      AL +   M+++G   D  TI + L +C    
Sbjct: 83  KLSYME--RTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPG 140

Query: 86  MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIR 145
               G+EIH  A++ GL  D  V+N ++ MY++CGS+  AR +FD+M  + VVSW+  I 
Sbjct: 141 ALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIG 200

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           GY   G  E A E+ ++M    + P+ +  IS+++ F+  A +  GKA+H+ ++ N   E
Sbjct: 201 GYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRIL-NAGHE 259

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
               A+ TAL+ MY+KCG+    +Q+F +L    +++W  MI G        E   ++ +
Sbjct: 260 S-DTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQ 318

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M  E V P++IT + L+  C     L  GK +H+ + + GF   + + NAL+ MY +C  
Sbjct: 319 MQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGS 378

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           I+ AR +FD M  KDV+ W A+I   A++    +A  ++  M+ + V PN VT   +L+ 
Sbjct: 379 IKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNA 438

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
           C+   ALE G+ +H  + + GL  D  +   LV+MY+ CG V  A ++F   I RDI  +
Sbjct: 439 CSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAY 498

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           NAM+ GY  H  G+EAL  F  ++  G+KP+ +T+I +LNAC+++G +   + +   +V 
Sbjct: 499 NAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIH-TLVR 557

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             G          +V    + G   +A  + + M  R N+I W A++  S  H
Sbjct: 558 KGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKR-NVISWNAIIGGSAQH 609



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 151/506 (29%), Positives = 281/506 (55%), Gaps = 6/506 (1%)

Query: 55  ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
           A+++  ++++ G++V++     +LK C +V     G+++H   I++    D Y  NALI 
Sbjct: 7   AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66

Query: 115 MYSECGSLVSARYLFDEMP--NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSE 172
           MY +CGS+  AR ++ ++    R V SW+ M+ GY + G  E+AL+++R+M+   + P  
Sbjct: 67  MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126

Query: 173 VAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLF 232
             ++S +S       ++ G+ IH   ++        V +A  +++MY+KCG++  A+++F
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQ--AGLLFDVKVANCILNMYAKCGSIEEAREVF 184

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
           +++ + SVVSWT+ I GY  C        +F +M +E V P+ IT +S++        L+
Sbjct: 185 DKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALK 244

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
            GK +H+ IL  G E   A+  ALV MY KC   +  R +F+ + ++D++ WN +I   A
Sbjct: 245 WGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLA 304

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
           +    ++A E++  M+   V PN++T V LL+ C  + AL  GK +H+ + K G   D+ 
Sbjct: 305 EGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIG 364

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           ++ AL+ MY++CG +  A  +F + + +D+  W AM+ G    G G EAL  + +M+++G
Sbjct: 365 VQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAG 424

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
           V+PN +T+  +LNACS    +  G+ +  ++V   GL         +V++    G + +A
Sbjct: 425 VEPNRVTYTSILNACSSPAALEWGRRIHQQVVEA-GLATDAHVGNTLVNMYSMCGSVKDA 483

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLH 558
            ++   M  R +++ + A++     H
Sbjct: 484 RQVFDRMIQR-DIVAYNAMIGGYAAH 508



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 137/435 (31%), Positives = 226/435 (51%), Gaps = 13/435 (2%)

Query: 29  YTNIIN-PLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  ++N  L  +N+++    +      A  +Y  M++ G   +  T   +L AC      
Sbjct: 285 FEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAAL 344

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
           H GKEIH    K G   D  V NALI MYS CGS+  AR +FD+M  +DV+SW+ MI G 
Sbjct: 345 HWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGL 404

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
            + G   EAL V +EM+   + P+ V   S+++  +  A ++ G+ IH  VV      + 
Sbjct: 405 AKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVV------EA 458

Query: 208 GVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
           G+A    +   L++MYS CG++  A+Q+F+R+ Q  +V++  MI GY   N   E ++LF
Sbjct: 459 GLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLF 518

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
             + EE + P ++T ++++  C   G L+  + +H  + + GF    ++ NALV  Y KC
Sbjct: 519 DRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKC 578

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
                A  +F+ M  ++V+ WNA+I   AQ      A +LF  MK+  V+P+ VT V LL
Sbjct: 579 GSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLL 638

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA-LVDMYAKCGDVNGAYRLFSEAIYR-D 441
           S C+ AG LE G+     + +    +  I     +VD+  + G ++ A  L     ++ +
Sbjct: 639 SACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQAN 698

Query: 442 ICMWNAMMAGYGMHG 456
             +W A++    +HG
Sbjct: 699 TRIWGALLGACRIHG 713



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 98/194 (50%), Gaps = 6/194 (3%)

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
           D A ++  +++    + N    + +L  C E   L  G+ +H +I +     D     AL
Sbjct: 5   DGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNAL 64

Query: 418 VDMYAKCGDVNGAYRLFSEAIY--RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           ++MY +CG +  A +++ +  Y  R +  WNAM+ GY  +G  E+AL     M++ G+ P
Sbjct: 65  INMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAP 124

Query: 476 NGITFIGLLNACSHAGLVTEGKSV-FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
           +  T +  L++C   G +  G+ + F  M  GL    K+ +  C++++  + G ++EA E
Sbjct: 125 DRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVAN--CILNMYAKCGSIEEARE 182

Query: 535 MIKSMPLRPNMIVW 548
           +   M  + +++ W
Sbjct: 183 VFDKME-KKSVVSW 195


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 224/675 (33%), Positives = 361/675 (53%), Gaps = 72/675 (10%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +++L++ Y +N     AL  +  M   G + + FT  ++LKAC+ V    +GK++HG
Sbjct: 122 LVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHG 181

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             + +G +GD +V+N L+ MY++C   + ++ LFDE+P R+VVSW+ +   Y +     E
Sbjct: 182 VVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGE 241

Query: 156 ALEVMREMRFMDIRPSEVAMIS-----------------------------------MVS 180
           A+ +  EM    I+P+E ++ S                                   +V 
Sbjct: 242 AVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVD 301

Query: 181 LFADVAD----------------VDLGKAIHACVVRNCKDEKL----------------- 207
           ++A V D                V     I  CV+    ++ L                 
Sbjct: 302 MYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKM 361

Query: 208 ----GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
                + ++  L+DMYSKC  L  A+  FN L +  +++W  +ISGY +  E  E + LF
Sbjct: 362 DMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLF 421

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
            EM +E +  ++ T+ +++     +  + + + +H   +++GF   + + N+L+D YGKC
Sbjct: 422 VEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKC 481

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
             +  A  +F+     D++ + ++I+AYAQ    ++A +LF+ M+  +++P+      LL
Sbjct: 482 SHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLL 541

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
           + C    A E GK LH +I K G  +D+    +LV+MYAKCG ++ A R FSE   R I 
Sbjct: 542 NACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIV 601

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            W+AM+ G   HG G +AL  F  M + GV PN IT + +L AC+HAGLVTE K  F+ M
Sbjct: 602 SWSAMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESM 661

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
               G  P  EHY CM+DLLGRAG ++EA E++  MP   N  VWGALL A+++HK+  +
Sbjct: 662 EELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVEL 721

Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
           G  AA  +  +EP+  G +VL++NIYA A +W +VA VRR+M++ +VKKEPG S +EV  
Sbjct: 722 GRRAAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKD 781

Query: 624 LVHKFIRGGMVNWKS 638
            V+ F+ G   +++S
Sbjct: 782 KVYTFLVGDRSHYRS 796



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 150/549 (27%), Positives = 261/549 (47%), Gaps = 49/549 (8%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
             P  +    V  + ++ + ++ LN+   + K      + +   +L  C        G +
Sbjct: 21  FKPAPKLIQTVPQFSEDPQTTAILNL---IDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQ 77

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IH    K+GL  D  + N LI +YS+C     AR L DE    D+VSWS +I GY + GL
Sbjct: 78  IHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGL 137

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
              AL    EM  + ++ +E    S++   + V D+ +GK +H  VV +  +    V +A
Sbjct: 138 GGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGD--VFVA 195

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
             L+ MY+KC     +K+LF+ + + +VVSW  + S Y++ +   E V LF EM+   + 
Sbjct: 196 NTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIK 255

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P+E ++ S++  C  +     GK +H Y+++ G+++    ANALVDMY K  ++  A ++
Sbjct: 256 PNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISV 315

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ +K  D++ WNAVI+        ++A EL   MK                        
Sbjct: 316 FEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMK------------------------ 351

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
              + LH+ + K  +E D+ +   LVDMY+KC  +  A   F+    +D+  WNA+++GY
Sbjct: 352 ---RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGY 408

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD--KMVHGL--- 507
             +    EAL  FV+M + G+  N  T   +L +       T G  V    + VHGL   
Sbjct: 409 SQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKS-------TAGLQVVHVCRQVHGLSVK 461

Query: 508 -GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
            G    I     ++D  G+   +++A  + +   +  +++ + +++ A   +     GE 
Sbjct: 462 SGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTI-GDLVSFTSMITA---YAQYGQGEE 517

Query: 567 AATQILEIE 575
           A    LE++
Sbjct: 518 ALKLFLEMQ 526



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 117/246 (47%), Gaps = 23/246 (9%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I  L  + S++T+Y +  +   AL ++  M+    + D F   ++L ACA +     GK+
Sbjct: 496 IGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQ 555

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H   +K G   D +  N+L+ MY++CGS+  A   F E+  R +VSWS MI G  + G 
Sbjct: 556 LHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGH 615

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK------DEK 206
             +AL++  +M    + P+ + ++S+           LG   HA +V   K      +E 
Sbjct: 616 GRQALQLFNQMLKEGVSPNHITLVSV-----------LGACNHAGLVTEAKLYFESMEEL 664

Query: 207 LGVAIA----TALIDMYSKCGNLAYAKQLFNRLNQNSVVS-WTVMISGYIRCNEINEGVR 261
            G          +ID+  + G +  A +L N++   +  S W  ++ G  R ++  E  R
Sbjct: 665 FGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALL-GAARIHKDVELGR 723

Query: 262 LFAEMI 267
             AEM+
Sbjct: 724 RAAEML 729


>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Cucumis sativus]
          Length = 712

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 209/594 (35%), Positives = 345/594 (58%), Gaps = 3/594 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMR-KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           + ++++ Y+ ++  S AL +++ MR ++   +D F +   LK C   L    G  +HGF+
Sbjct: 83  WTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFS 142

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K GL    +V +AL+ MY + G +  +  +FDEMP R+ V+W+ +I G  R G  E  L
Sbjct: 143 VKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGL 202

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
                M    +     A    +   AD   ++ G++IH   ++   DE     +A +L  
Sbjct: 203 AYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDEN--SFVANSLTT 260

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+KCG L Y    F ++    VVSWT +++ YI+  + + G++ F  M   NV P+E T
Sbjct: 261 MYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYT 320

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             ++I  C     L+ G+ LHA++L  GF  +L++AN+++ +Y KC E+ S   +F  MK
Sbjct: 321 FSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMK 380

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +D++ W+ +I+AY+Q    ++AFE    M+    +PNE  +  +LS+C     LE GK 
Sbjct: 381 FRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQ 440

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH ++   GLE   ++ +AL+ MYAKCG +  A ++F ++   DI  W AM++GY  HG 
Sbjct: 441 LHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGH 500

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            +EA+  F ++++ G++P+ +TFIG+L ACSHAG+V  G   F+ M     + P  EHYG
Sbjct: 501 SQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYG 560

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CM+DLL RAG L +A  +I+SMP++ + +VW  LL A ++H +   G+ AA ++L+++P 
Sbjct: 561 CMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPN 620

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             G ++ ++NI+A   +W + A +R +MK   V KEPG+SSV+V   V  F+ G
Sbjct: 621 CAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSG 674



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 217/459 (47%), Gaps = 13/459 (2%)

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           D   +N  +++  +   L  AR LFD++P RD VSW+ +I GY       EAL +  +MR
Sbjct: 48  DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107

Query: 165 FMDIRPSEVAMIS-MVSLFADVADVDL----GKAIHACVVRNCKDEKLGVAIATALIDMY 219
                 SE+ +   ++SL      + L    G  +H   V+        V + +AL+DMY
Sbjct: 108 LQ----SELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNS--VFVGSALLDMY 161

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            K G +  + ++F+ +   + V+WT +I+G +R      G+  F+ M    V        
Sbjct: 162 MKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYA 221

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
             +      G L  G+ +H   L+ GF+ +  +AN+L  MY KC ++      F  M++ 
Sbjct: 222 IALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTL 281

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           DV+ W  +++AY Q    D   + F  M+ S V PNE T   ++S C     L+ G+ LH
Sbjct: 282 DVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLH 341

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
            ++   G    + +  +++ +Y+KCG++    ++F    +RDI  W+ ++A Y   G GE
Sbjct: 342 AHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGE 401

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           EA  +   M   G KPN      +L+ C    ++ +GK +   ++  +GL         +
Sbjct: 402 EAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVL-SVGLEQTSMVCSAL 460

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           + +  + G + EA ++      + ++I W A+++    H
Sbjct: 461 IIMYAKCGSIAEASKIFMD-SWKDDIISWTAMISGYAEH 498



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 175/353 (49%), Gaps = 9/353 (2%)

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           K+ +A A   + +  K  +L  A+ LF++L Q   VSWT +ISGY+  ++ +E +RLF++
Sbjct: 46  KVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSK 105

Query: 266 MIEENVFPSEITILSLIIE-CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           M  ++    +  +LSL ++ CG       G  LH + ++ G   S+ + +AL+DMY K  
Sbjct: 106 MRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIG 165

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
           EI  +  +FD M +++ + W AVI+   +A   +     F  M  SKV  +       L 
Sbjct: 166 EIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALK 225

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
              ++GAL  G+ +HT   K+G + +  +  +L  MY KCG ++     F +    D+  
Sbjct: 226 ASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVS 285

Query: 445 WNAMMAGY---GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           W  ++  Y   G   CG +A   F  M  S V PN  TF  +++ C++   +  G+ +  
Sbjct: 286 WTTIVTAYIQMGKEDCGLQA---FKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHA 342

Query: 502 KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            ++  +G V  +     ++ L  + G L    ++  SM  R ++I W  ++AA
Sbjct: 343 HVL-CVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFR-DIITWSTIIAA 393


>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
 gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
 gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
 gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 857

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 208/594 (35%), Positives = 346/594 (58%), Gaps = 3/594 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y K     S +  ++ MR +    +  T   +L  CA  L+  LG ++HG  +
Sbjct: 207 WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV 266

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +G+D +  + N+L+ MYS+CG    A  LF  M   D V+W+ MI GY + GL EE+L 
Sbjct: 267 VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLT 326

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
              EM    + P  +   S++   +   +++  K IH  ++R+     L + + +ALID 
Sbjct: 327 FFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRH--SISLDIFLTSALIDA 384

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC  ++ A+ +F++ N   VV +T MISGY+      + + +F  +++  + P+EIT+
Sbjct: 385 YFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITL 444

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +S++   G +  L+LG+ LH +I++ GF+    +  A++DMY KC  +  A  +F+ +  
Sbjct: 445 VSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSK 504

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +D++ WN++I+  AQ+     A ++F  M VS +  + V++   LS C    +   GK +
Sbjct: 505 RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAI 564

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ K  L  DV  ++ L+DMYAKCG++  A  +F     ++I  WN+++A  G HG  
Sbjct: 565 HGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKL 624

Query: 459 EEALIFFVDM-ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           +++L  F +M E+SG++P+ ITF+ ++++C H G V EG   F  M    G+ P+ EHY 
Sbjct: 625 KDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYA 684

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           C+VDL GRAG L EA+E +KSMP  P+  VWG LL A +LHKN  + E+A++++++++P 
Sbjct: 685 CVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPS 744

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           N GY VL+SN +A A  W  V  VR +MKE  V+K PG+S +E+N   H F+ G
Sbjct: 745 NSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSG 798



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 162/525 (30%), Positives = 268/525 (51%), Gaps = 14/525 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++S+++N   + AL  Y  M   G   D  T P ++KAC   L    G +     +
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV-ALKNFKGIDFLSDTV 164

Query: 99  KN-GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
            + G+D + +V+++LI+ Y E G +     LFD +  +D V W+ M+ GY + G  +  +
Sbjct: 165 SSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVI 224

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           +    MR   I P+ V    ++S+ A    +DLG  +H  VV +  D     +I  +L+ 
Sbjct: 225 KGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVD--FEGSIKNSLLS 282

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYSKCG    A +LF  +++   V+W  MISGY++   + E +  F EMI   V P  IT
Sbjct: 283 MYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAIT 342

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             SL+        L+  K +H YI+R+     + + +AL+D Y KCR +  A+ +F    
Sbjct: 343 FSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN 402

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           S DV+++ A+IS Y        + E+F  +   K+ PNE+T+V +L +     AL++G+ 
Sbjct: 403 SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRE 462

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH +I K+G +    +  A++DMYAKCG +N AY +F     RDI  WN+M+        
Sbjct: 463 LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDN 522

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLVPKI 513
              A+  F  M  SG+  + ++    L+AC  A L +E    F K +HG      L   +
Sbjct: 523 PSAAIDIFRQMGVSGICYDCVSISAALSAC--ANLPSES---FGKAIHGFMIKHSLASDV 577

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
                ++D+  + G L  A  + K+M  + N++ W +++AA   H
Sbjct: 578 YSESTLIDMYAKCGNLKAAMNVFKTMKEK-NIVSWNSIIAACGNH 621



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/533 (25%), Positives = 259/533 (48%), Gaps = 24/533 (4%)

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPT----ILKACAQVLMTHLGKEIHGFAI 98
           ++S  K   P+ A    +   +N S     TIP     +L+AC+   +   GK++H F I
Sbjct: 3   ISSVAKRFAPAIAPYKKSLPLRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLI 62

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR--DVVSWSTMIRGYHRGGLPEEA 156
            N + GD+Y    ++ MY+ CGS      +F  +  R   +  W+++I  + R GL  +A
Sbjct: 63  VNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQA 122

Query: 157 LEVMREMRFMDIRPSEVAMISMVS---LFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           L    +M    + P       +V       +   +D      + +  +C +      +A+
Sbjct: 123 LAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNE-----FVAS 177

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           +LI  Y + G +    +LF+R+ Q   V W VM++GY +C  ++  ++ F+ M  + + P
Sbjct: 178 SLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISP 237

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           + +T   ++  C     + LG  LH  ++ +G +F  ++ N+L+ MY KC     A  LF
Sbjct: 238 NAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLF 297

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
             M   D + WN +IS Y Q+  ++++   F  M  S V P+ +T   LL   ++   LE
Sbjct: 298 RMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLE 357

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
             K +H YI +  + +D+ L +AL+D Y KC  V+ A  +FS+    D+ ++ AM++GY 
Sbjct: 358 YCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYL 417

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +G   ++L  F  + +  + PN IT + +L      G++   K    + +HG  +    
Sbjct: 418 HNGLYIDSLEMFRWLVKVKISPNEITLVSILPV---IGILLALK--LGRELHGFIIKKGF 472

Query: 514 E---HYGC-MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
           +   + GC ++D+  + G ++ A+E+ + +  R +++ W +++       NPS
Sbjct: 473 DNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKR-DIVSWNSMITRCAQSDNPS 524



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 89/157 (56%), Gaps = 1/157 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +NS++T   +++ PS+A++I+  M  +G   D  +I   L ACA +     GK IHG
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F IK+ L  D Y  + LI MY++CG+L +A  +F  M  +++VSW+++I      G  ++
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKD 626

Query: 156 ALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLG 191
           +L +  EM     IRP ++  + ++S    V DVD G
Sbjct: 627 SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEG 663


>gi|50251760|dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|222623393|gb|EEE57525.1| hypothetical protein OsJ_07836 [Oryza sativa Japonica Group]
          Length = 667

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 231/595 (38%), Positives = 336/595 (56%), Gaps = 15/595 (2%)

Query: 35  PLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           P++  NSL+ SY        AL +Y+ MR      D+ T P   KACA + +   G+ +H
Sbjct: 76  PVSFSNSLLRSYTGLGCHREALAVYSAMRA----FDHLTFPFAAKACAGLRLGRHGRAVH 131

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
             A+  G  GD YV NALI MY  CG + +A  +F  M NR VVSW+ +I G  + G  E
Sbjct: 132 CRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAE 191

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--VAIA 212
            ALEV  EM    +      ++S++   A   D++ G+A+H    R  +D+ LG  VA+ 
Sbjct: 192 RALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVH----RLVEDKGLGDYVAVK 247

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQN-SVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
            ALIDMY KC +L  A+++F+    +  VVSWT MI  Y+  +   E + L  +M+    
Sbjct: 248 NALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGA 307

Query: 272 -FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
            +P+ +T++ L+  C  +   +  K  HA  +R G +  +A+  AL+D Y +C +++  R
Sbjct: 308 AWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMR 367

Query: 331 -TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
            TL  G  S     WNA +S Y  +    KA ELF  M    VRP+  TM  +L    E+
Sbjct: 368 LTLERG--SWRAETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAES 425

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
             L+ GK +H ++   G      + T L+D+Y+K GD++ A+ LF     +D+  W  ++
Sbjct: 426 ADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTII 485

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           AGYG+HG    A++ +  M  SG KPN +T   LL ACSHAG++ EG  VF  M +  GL
Sbjct: 486 AGYGIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGL 545

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
           +P  EHY C+VD+LGRAG ++EAH +I+ MP  P+  VWGALL A  LHKN   GE+AA 
Sbjct: 546 MPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGEVAAK 605

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
           ++ +++P+N G  VL+ NIYA A+RW DV  VRR+M E  + KEPG S VE   +
Sbjct: 606 RLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEARSV 660



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 225/464 (48%), Gaps = 36/464 (7%)

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWS-TMIRGYHRGGLPEEALEVMREMRFMDI 168
           + L  +Y  CG   SA  L  +MP    VS+S +++R Y   G   EAL V   MR  D 
Sbjct: 49  HPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAFD- 107

Query: 169 RPSEVAMISMVSLFADVADVDL-----GKAIHACVVRNCKDEKLGVA----IATALIDMY 219
                    +   FA  A   L     G+A+H      C+    G      +  ALI MY
Sbjct: 108 --------HLTFPFAAKACAGLRLGRHGRAVH------CRALAAGFGGDTYVQNALISMY 153

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
             CG++  A+ +F  +   +VVSW  +I+G ++       + +F EM  + V     T++
Sbjct: 154 MSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVV 213

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-S 338
           S++  C     L  G+ +H  +   G    +A+ NAL+DMYGKCR +  AR +FD  K  
Sbjct: 214 SVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHD 273

Query: 339 KDVMIWNAVISAYAQAHCIDKAFE---LFIHMKVSKVR-PNEVTMVGLLSLCTEAGALEM 394
           KDV+ W A+I AY      D+AFE   L   M +S    PN VTMV LLS C    + + 
Sbjct: 274 KDVVSWTAMIGAYVLN---DRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKH 330

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
            K  H    + GL+ D+ ++TAL+D YA+CG +           +R    WNA ++GY +
Sbjct: 331 AKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAE-TWNAALSGYTV 389

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
            G  ++A+  F  M    V+P+  T   +L A + +  + EGK++   ++  LG +   E
Sbjct: 390 SGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLL-TLGFLRSTE 448

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
               ++D+  +AG LD A  + + +P + +++ W  ++A   +H
Sbjct: 449 IATGLIDVYSKAGDLDAAWALFQWLPEK-DVVAWTTIIAGYGIH 491


>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 849

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 208/591 (35%), Positives = 349/591 (59%), Gaps = 2/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y+K    +SA+ ++  MR +G + +  T+   L  CA       G ++H  A+
Sbjct: 216 WNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAV 275

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+ +  V+N L+ MY++C  L  A  LF  MP  D+V+W+ MI G  + GL ++AL 
Sbjct: 276 KYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALR 335

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+   ++P  V + S++    ++     GK IH  +VRNC    + V + +AL+D+
Sbjct: 336 LFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCA--HVDVFLVSALVDI 393

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC ++  A+ +F+      VV  + MISGY+        V++F  ++   + P+ + +
Sbjct: 394 YFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMV 453

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +  C  +  +++G+ LH Y+L+N +E    + +AL+DMY KC  +  +  +F  M +
Sbjct: 454 ASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSA 513

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN++IS++AQ    ++A +LF  M +  V+ N VT+  +LS C    A+  GK +
Sbjct: 514 KDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEI 573

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I K  +  D+  ++AL+DMY KCG++  A R+F     ++   WN++++ YG HG  
Sbjct: 574 HGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYGAHGLV 633

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +E++     M+  G K + +TF+ L++AC+HAG V EG  +F  M     + P++EH  C
Sbjct: 634 KESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQVEHLSC 693

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDL  RAG LD+A + I  MP +P+  +WGALL A ++H+N  + EIA+ ++ +++P N
Sbjct: 694 MVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHN 753

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            GY VLMSNI AVA RW+ V+ +RR+MK+ +V+K PG+S V+VN   H F+
Sbjct: 754 CGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWVDVNNTSHLFV 804



 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 171/557 (30%), Positives = 296/557 (53%), Gaps = 15/557 (2%)

Query: 12  QTRQCHAHIIKTHFKFSYTNIINPLTR--------YNSLVTSYIKNNKPSSALNIYAFMR 63
           QTR    +++   F+     + + L R        +N L+  +        A+  Y  M 
Sbjct: 79  QTRLVGMYVLARRFR-DAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMW 137

Query: 64  KNGS--EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
            + S    D  T+P ++K+CA +   HLG+ +H      GLD D YV +ALI+MY++ G 
Sbjct: 138 AHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGL 197

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           L  AR +FD M  RD V W+ M+ GY + G    A+ + R MR     P+   +   +S+
Sbjct: 198 LDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSV 257

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
            A  AD+  G  +H   V+   + +  VA+A  L+ MY+KC  L  A +LF  + ++ +V
Sbjct: 258 CAAEADLLSGVQLHTLAVKYGLEPE--VAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLV 315

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           +W  MISG ++   +++ +RLF +M +  + P  +T+ SL+     + G + GK +H YI
Sbjct: 316 TWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYI 375

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
           +RN     + + +ALVD+Y KCR++R A+ +FD  KS DV+I + +IS Y      + A 
Sbjct: 376 VRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAV 435

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
           ++F ++    ++PN V +   L  C    A+ +G+ LH Y+ K   E    +++AL+DMY
Sbjct: 436 KMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMY 495

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
           +KCG ++ ++ +FS+   +D   WN+M++ +  +G  EEAL  F  M   GVK N +T  
Sbjct: 496 SKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTIS 555

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
            +L+AC+    +  GK +   ++ G  +   +     ++D+ G+ G L+ A  + + MP 
Sbjct: 556 SILSACAGLPAIYYGKEIHGIIIKG-PIRADLFAESALIDMYGKCGNLELALRVFEHMPE 614

Query: 542 RPNMIVWGALLAASKLH 558
           + N + W ++++A   H
Sbjct: 615 K-NEVSWNSIISAYGAH 630



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 234/424 (55%), Gaps = 4/424 (0%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           + L  +N +++  ++N     AL ++  M+K+G + D+ T+ ++L A  ++     GKEI
Sbjct: 312 DDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEI 371

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG+ ++N    D ++ +AL+ +Y +C  +  A+ +FD   + DVV  STMI GY    + 
Sbjct: 372 HGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMS 431

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           E A+++ R +  + I+P+ V + S +   A +A + +G+ +H  V++N  + +    + +
Sbjct: 432 EAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGR--CYVES 489

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMYSKCG L  +  +F++++    V+W  MIS + +  E  E + LF +MI E V  
Sbjct: 490 ALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKY 549

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           + +TI S++  C  +  +  GK +H  I++      L   +AL+DMYGKC  +  A  +F
Sbjct: 550 NNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVF 609

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + M  K+ + WN++ISAY     + ++ +L   M+    + + VT + L+S C  AG ++
Sbjct: 610 EHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQ 669

Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAG 451
            G +      E+  +E  V   + +VD+Y++ G ++ A +  ++  ++ D  +W A++  
Sbjct: 670 EGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHA 729

Query: 452 YGMH 455
             +H
Sbjct: 730 CRVH 733



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 240/533 (45%), Gaps = 27/533 (5%)

Query: 48  KNNKPSSALNIYAFMRKNGSEVDN-----FTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           ++ KP     + A   +  S   N     + +  +L+ C       LG  IH  A+ +GL
Sbjct: 8   RSFKPPPRKWLSAAFSETASSATNASPCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGL 67

Query: 103 -----DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV---VSWSTMIRGYHRGGLPE 154
                 G A +   L+ MY        A  +F  +P       + W+ +IRG+   G   
Sbjct: 68  LDAAGPGPAALQTRLVGMYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHR 127

Query: 155 EALEVMREM--RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            A+    +M       RP    +  +V   A +  + LG+ +H        D  + V   
Sbjct: 128 LAVLFYVKMWAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVG-- 185

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           +ALI MY+  G L  A+++F+ +++   V W VM+ GY++  ++   V LF  M      
Sbjct: 186 SALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCD 245

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P+  T+   +  C     L  G  LH   ++ G E  +A+AN LV MY KC+ +  A  L
Sbjct: 246 PNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRL 305

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F  M   D++ WN +IS   Q   +D A  LF  M+ S ++P+ VT+  LL   TE    
Sbjct: 306 FGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGF 365

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           + GK +H YI +    VDV L +ALVD+Y KC DV  A  +F      D+ + + M++GY
Sbjct: 366 KQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGY 425

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
            ++   E A+  F  +   G+KPN +     L AC+    +  G+      +HG  L   
Sbjct: 426 VLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQE-----LHGYVLKNA 480

Query: 513 IEHY----GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
            E        ++D+  + G LD +H M   M  + + + W +++++   +  P
Sbjct: 481 YEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAK-DEVTWNSMISSFAQNGEP 532


>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g47840-like [Cucumis
           sativus]
          Length = 712

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 209/594 (35%), Positives = 345/594 (58%), Gaps = 3/594 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMR-KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           + ++++ Y+ ++  S AL +++ MR ++   +D F +   LK C   L    G  +HGF+
Sbjct: 83  WTNIISGYVNSSDSSEALRLFSKMRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFS 142

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K GL    +V +AL+ MY + G +  +  +FDEMP R+ V+W+ +I G  R G  E  L
Sbjct: 143 VKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGL 202

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
                M    +     A    +   AD   ++ G++IH   ++   DE     +A +L  
Sbjct: 203 AYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDEN--SFVANSLTT 260

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+KCG L Y    F ++    VVSWT +++ YI+  + + G++ F  M   NV P+E T
Sbjct: 261 MYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYT 320

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             ++I  C     L+ G+ LHA++L  GF  +L++AN+++ +Y KC E+ S   +F  MK
Sbjct: 321 FSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMK 380

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +D++ W+ +I+AY+Q    ++AFE    M+    +PNE  +  +LS+C     LE GK 
Sbjct: 381 FRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQ 440

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH ++   GLE   ++ +AL+ MYAKCG +  A ++F ++   DI  W AM++GY  HG 
Sbjct: 441 LHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGH 500

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            +EA+  F ++++ G++P+ +TFIG+L ACSHAG+V  G   F+ M     + P  EHYG
Sbjct: 501 SQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYG 560

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CM+DLL RAG L +A  +I+SMP++ + +VW  LL A ++H +   G+ AA ++L+++P 
Sbjct: 561 CMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPN 620

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             G ++ ++NI+A   +W + A +R +MK   V KEPG+SSV+V   V  F+ G
Sbjct: 621 CAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSVKVKDSVFAFVSG 674



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 217/459 (47%), Gaps = 13/459 (2%)

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           D   +N  +++  +   L  AR LFD++P RD VSW+ +I GY       EAL +  +MR
Sbjct: 48  DLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMR 107

Query: 165 FMDIRPSEVAMIS-MVSLFADVADVDL----GKAIHACVVRNCKDEKLGVAIATALIDMY 219
                 SE+ +   ++SL      + L    G  +H   V+        V + +AL+DMY
Sbjct: 108 LQ----SELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNS--VFVGSALLDMY 161

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            K G +  + ++F+ +   + V+WT +I+G +R      G+  F+ M    V        
Sbjct: 162 MKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYA 221

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
             +      G L  G+ +H   L+ GF+ +  +AN+L  MY KC ++      F  M++ 
Sbjct: 222 IALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTL 281

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           DV+ W  +++AY Q    D   + F  M+ S V PNE T   ++S C     L+ G+ LH
Sbjct: 282 DVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLH 341

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
            ++   G    + +  +++ +Y+KCG++    ++F    +RDI  W+ ++A Y   G GE
Sbjct: 342 AHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGE 401

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           EA  +   M   G KPN      +L+ C    ++ +GK +   ++  +GL         +
Sbjct: 402 EAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVL-SVGLEQTSMVCSAL 460

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           + +  + G + EA ++      + ++I W A+++    H
Sbjct: 461 IIMYAKCGSIAEASKIFMD-SWKDDIISWTAMISGYAEH 498



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 175/353 (49%), Gaps = 9/353 (2%)

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           K+ +A A   + +  K  +L  A+ LF++L Q   VSWT +ISGY+  ++ +E +RLF++
Sbjct: 46  KVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSK 105

Query: 266 MIEENVFPSEITILSLIIE-CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           M  ++    +  +LSL ++ CG       G  LH + ++ G   S+ + +AL+DMY K  
Sbjct: 106 MRLQSELRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIG 165

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
           EI  +  +FD M +++ + W AVI+   +A   +     F  M  SKV  +       L 
Sbjct: 166 EIGRSCKVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALK 225

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
              ++GAL  G+ +HT   K+G + +  +  +L  MY KCG ++     F +    D+  
Sbjct: 226 ASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVS 285

Query: 445 WNAMMAGY---GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           W  ++  Y   G   CG +A   F  M  S V PN  TF  +++ C++   +  G+ +  
Sbjct: 286 WTTIVTAYIQMGKEDCGLQA---FKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHA 342

Query: 502 KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            ++  +G V  +     ++ L  + G L    ++  SM  R ++I W  ++AA
Sbjct: 343 HVL-CVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFR-DIITWSTIIAA 393


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 223/594 (37%), Positives = 339/594 (57%), Gaps = 6/594 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N LV  Y K      ALN+Y  M       + +T P++LK CA V     GKEIH   I
Sbjct: 166 WNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVI 225

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G + D  V NALI MY +CG + +AR LFD+MP RD +SW+ MI GY   G   E LE
Sbjct: 226 RFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLE 285

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG-VAIATALID 217
           +   MR + + P  + M ++ S    + +  LG+ +H  VV   K E  G +++  +LI 
Sbjct: 286 LFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVV---KSEFGGDISMNNSLIQ 342

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYS  G L  A+ +F+R+    VVSWT MI+  +      + V  +  M  E + P EIT
Sbjct: 343 MYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEIT 402

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++S++  C  +G L LG  LH   ++ G    + ++N+L+DMY KC+ + +A  +F  + 
Sbjct: 403 LVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNIS 462

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            K+V+ W ++I      +   +A   F  MK S ++PN VT++ +LS C   GAL  GK 
Sbjct: 463 GKNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKE 521

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H +  + G+  D  L  A++DMY +CG    A   F+    +D+  WN ++ GY   G 
Sbjct: 522 IHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQ-KKDVTAWNILLTGYAQQGQ 580

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            + A+  F  M    + P+ ITFI LL ACS +G+VTEG   F+ M +   L P ++HY 
Sbjct: 581 AKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYA 640

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           C+VD+LGRAG LD+A++ I+ MP+RP+  +WGALL A ++H+N  +GEIAA ++ E + +
Sbjct: 641 CVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNK 700

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           + GY +L+ N+YA    W+ V+ VR +M+E  +  +PG S VE+ G VH F+ G
Sbjct: 701 SVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSG 754



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/475 (32%), Positives = 253/475 (53%), Gaps = 20/475 (4%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           + NAL+ M+   G+L+ A Y+F +M  RDV SW+ ++ GY + G  +EAL +   M + +
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
           IRP+     S++   A V+D+  GK IHA V+R   +    V +  ALI MY KCG+++ 
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESD--VDVGNALITMYVKCGDISN 251

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A+ LF+++ +   +SW  MISGY       EG+ LF+ M E +V P  IT+ ++   C  
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
           +   +LG+ +H Y++++ F   ++M N+L+ MY     +  A T+F  M+SKDV+ W A+
Sbjct: 312 LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAM 371

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           I++        KA E +  M++  + P+E+T+V +LS C   G L++G  LH    K GL
Sbjct: 372 IASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL 431

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
              VI+  +L+DMY+KC  V+ A  +F     +++  W +++ G  ++    EAL+FF  
Sbjct: 432 VSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQ 491

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL-------GLVPKIEHYGCMV 520
           M+ S +KPN +T I +L+AC+  G +  GK +     H L       G +P       ++
Sbjct: 492 MKES-MKPNSVTLISVLSACARIGALMRGKEIH---AHALRTGVGFDGFLPN-----AIL 542

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           D+  R G    A     S   + ++  W  LL          +      ++LE+E
Sbjct: 543 DMYVRCGRKVPALNQFNSQ--KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELE 595



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/401 (28%), Positives = 208/401 (51%), Gaps = 8/401 (1%)

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV--RNCKDEKLGVAI 211
           E+A++ +  M  + I   E A I+++ L       D G  ++  V   ++C    L V +
Sbjct: 79  EQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSC----LCVRL 134

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
             AL+ M+ + GNL  A  +F ++++  V SW V++ GY +    +E + L+  M+   +
Sbjct: 135 GNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEI 194

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P+  T  S++  C  V  +  GK +HA+++R GFE  + + NAL+ MY KC +I +AR 
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARM 254

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           LFD M  +D + WNA+IS Y +     +  ELF  M+   V P+ +TM  + S C     
Sbjct: 255 LFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDN 314

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
             +G+ +H Y+ K     D+ +  +L+ MY+  G +  A  +FS    +D+  W AM+A 
Sbjct: 315 ERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIAS 374

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
              H    +A+  +  ME  G+ P+ IT + +L+AC+  G +  G  + +  +   GLV 
Sbjct: 375 LVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIK-TGLVS 433

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
            +     ++D+  +   +D A E+ +++  + N++ W +L+
Sbjct: 434 HVIVSNSLIDMYSKCKCVDNALEVFRNISGK-NVVSWTSLI 473



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 2/198 (1%)

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
           +++A +    M   ++   E   + LL LC    A + G  ++  +      + V L  A
Sbjct: 78  LEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNA 137

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           L+ M+ + G++  A+ +F +   RD+  WN ++ GY   GC +EAL  +  M  + ++PN
Sbjct: 138 LLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPN 197

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
             TF  +L  C+    +  GK +   ++   G    ++    ++ +  + G +  A  + 
Sbjct: 198 VYTFPSVLKTCAGVSDIARGKEIHAHVIR-FGFESDVDVGNALITMYVKCGDISNARMLF 256

Query: 537 KSMPLRPNMIVWGALLAA 554
             MP R + I W A+++ 
Sbjct: 257 DKMPKR-DRISWNAMISG 273


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 223/594 (37%), Positives = 339/594 (57%), Gaps = 6/594 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N LV  Y K      ALN+Y  M       + +T P++LK CA V     GKEIH   I
Sbjct: 166 WNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVI 225

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G + D  V NALI MY +CG + +AR LFD+MP RD +SW+ MI GY   G   E LE
Sbjct: 226 RFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLE 285

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG-VAIATALID 217
           +   MR + + P  + M ++ S    + +  LG+ +H  VV   K E  G +++  +LI 
Sbjct: 286 LFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVV---KSEFGGDISMNNSLIQ 342

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYS  G L  A+ +F+R+    VVSWT MI+  +      + V  +  M  E + P EIT
Sbjct: 343 MYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEIT 402

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++S++  C  +G L LG  LH   ++ G    + ++N+L+DMY KC+ + +A  +F  + 
Sbjct: 403 LVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNIS 462

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            K+V+ W ++I      +   +A   F  MK S ++PN VT++ +LS C   GAL  GK 
Sbjct: 463 GKNVVSWTSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKE 521

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H +  + G+  D  L  A++DMY +CG    A   F+    +D+  WN ++ GY   G 
Sbjct: 522 IHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNSQ-KKDVTAWNILLTGYAQQGQ 580

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            + A+  F  M    + P+ ITFI LL ACS +G+VTEG   F+ M +   L P ++HY 
Sbjct: 581 AKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYA 640

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           C+VD+LGRAG LD+A++ I+ MP+RP+  +WGALL A ++H+N  +GEIAA ++ E + +
Sbjct: 641 CVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNK 700

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           + GY +L+ N+YA    W+ V+ VR +M+E  +  +PG S VE+ G VH F+ G
Sbjct: 701 SVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWVEIKGKVHAFLSG 754



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/475 (32%), Positives = 253/475 (53%), Gaps = 20/475 (4%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           + NAL+ M+   G+L+ A Y+F +M  RDV SW+ ++ GY + G  +EAL +   M + +
Sbjct: 134 LGNALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAE 193

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
           IRP+     S++   A V+D+  GK IHA V+R   +    V +  ALI MY KCG+++ 
Sbjct: 194 IRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESD--VDVGNALITMYVKCGDISN 251

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A+ LF+++ +   +SW  MISGY       EG+ LF+ M E +V P  IT+ ++   C  
Sbjct: 252 ARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACEL 311

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
           +   +LG+ +H Y++++ F   ++M N+L+ MY     +  A T+F  M+SKDV+ W A+
Sbjct: 312 LDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAM 371

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           I++        KA E +  M++  + P+E+T+V +LS C   G L++G  LH    K GL
Sbjct: 372 IASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGL 431

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
              VI+  +L+DMY+KC  V+ A  +F     +++  W +++ G  ++    EAL+FF  
Sbjct: 432 VSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQ 491

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL-------GLVPKIEHYGCMV 520
           M+ S +KPN +T I +L+AC+  G +  GK +     H L       G +P       ++
Sbjct: 492 MKES-MKPNSVTLISVLSACARIGALMRGKEIH---AHALRTGVGFDGFLPN-----AIL 542

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           D+  R G    A     S   + ++  W  LL          +      ++LE+E
Sbjct: 543 DMYVRCGRKVPALNQFNSQ--KKDVTAWNILLTGYAQQGQAKLAVELFDKMLELE 595



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 206/399 (51%), Gaps = 4/399 (1%)

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           E+A++ +  M  + I   E A I+++ L       D G  ++  V  +     L V +  
Sbjct: 79  EQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELV--SSSKSCLCVRLGN 136

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+ M+ + GNL  A  +F ++++  V SW V++ GY +    +E + L+  M+   + P
Sbjct: 137 ALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRP 196

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +  T  S++  C  V  +  GK +HA+++R GFE  + + NAL+ MY KC +I +AR LF
Sbjct: 197 NVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLF 256

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           D M  +D + WNA+IS Y +     +  ELF  M+   V P+ +TM  + S C       
Sbjct: 257 DKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNER 316

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           +G+ +H Y+ K     D+ +  +L+ MY+  G +  A  +FS    +D+  W AM+A   
Sbjct: 317 LGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLV 376

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            H    +A+  +  ME  G+ P+ IT + +L+AC+  G +  G  + +  +   GLV  +
Sbjct: 377 SHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIK-TGLVSHV 435

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
                ++D+  +   +D A E+ +++  + N++ W +L+
Sbjct: 436 IVSNSLIDMYSKCKCVDNALEVFRNISGK-NVVSWTSLI 473



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 2/198 (1%)

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
           +++A +    M   ++   E   + LL LC    A + G  ++  +      + V L  A
Sbjct: 78  LEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLGNA 137

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           L+ M+ + G++  A+ +F +   RD+  WN ++ GY   GC +EAL  +  M  + ++PN
Sbjct: 138 LLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPN 197

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
             TF  +L  C+    +  GK +   ++   G    ++    ++ +  + G +  A  + 
Sbjct: 198 VYTFPSVLKTCAGVSDIARGKEIHAHVIR-FGFESDVDVGNALITMYVKCGDISNARMLF 256

Query: 537 KSMPLRPNMIVWGALLAA 554
             MP R + I W A+++ 
Sbjct: 257 DKMPKR-DRISWNAMISG 273


>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Vitis vinifera]
          Length = 732

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 208/590 (35%), Positives = 345/590 (58%), Gaps = 5/590 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++  Y +  +   A ++Y  MR+ G +  + T+  +L    +  + HL + +H   I
Sbjct: 117 WTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLE--LVHL-QCLHACVI 173

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G   D  ++N+++ +Y +CG +  A+ LF+ M  RDV+SW++++ GY + G   E L+
Sbjct: 174 QYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQ 233

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++  M+   I P +    S+VS  A  + + +GK +H  ++R   ++     I T+LI M
Sbjct: 234 LLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQD--SHIETSLIGM 291

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCGN+  A ++F  +    V+SWT MISG ++ +  +  V +F  M++  V PS  TI
Sbjct: 292 YLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATI 351

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +G   LG  +H YILR   +  +   N+LV MY KC  +  + ++FD M  
Sbjct: 352 ASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSR 411

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +D++ WNA++S +AQ   + KA  LF  M+ ++ RP+ +T+V LL  C   GAL  GKW+
Sbjct: 412 RDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWI 471

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ K  L   +++ TALVDMY+KCGD+  A + F     +D+  W++++AGYG HG G
Sbjct: 472 HNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKG 531

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           E AL  + D   +G++PN + ++ +L+ACSH GLV +G S F  M    G+ P++EH  C
Sbjct: 532 ETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRAC 591

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VDLL RAG ++EA+   K M  +P+M V G LL A +   N  +G+I A +I+ ++P N
Sbjct: 592 IVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPAN 651

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            G  V +++ YA   RW+ V  V   MK + +KK PG+S +E++G +  F
Sbjct: 652 AGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTF 701



 Score =  299 bits (766), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 169/529 (31%), Positives = 284/529 (53%), Gaps = 8/529 (1%)

Query: 31  NIINPLTR-YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL 89
           + +NP T+ YN+++            L  Y+ M    +  D  T P+++KAC  + +   
Sbjct: 7   SFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSH 66

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G   H   I +G   D+Y++ +LI  YS+ G   SAR +FD M +R+VV W+TMI  Y R
Sbjct: 67  GLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTR 126

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
            G  + A  +   MR   I+PS V M+ ++S   ++  +   + +HACV++        V
Sbjct: 127 AGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHL---QCLHACVIQYGFGSD--V 181

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
           A+A +++++Y KCG +  A+ LF  ++   V+SW  ++SGY +   I E ++L   M  +
Sbjct: 182 ALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTD 241

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            + P + T  SL+        L +GK +H +ILR G E    +  +L+ MY KC  + SA
Sbjct: 242 GIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSA 301

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             +F+GM  KDV+ W A+IS   Q  C D A  +F  M  S+V P+  T+  +L+ C E 
Sbjct: 302 FRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAEL 361

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           G+  +G  +H YI +Q +++D+  + +LV MYAKCG +  +  +F     RDI  WNA++
Sbjct: 362 GSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIV 421

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           +G+  +G   +AL+ F +M ++  +P+ IT + LL AC+  G + +GK + +  V    L
Sbjct: 422 SGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHN-FVTKSCL 480

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            P I     +VD+  + G L  A +    MP + +++ W +++A    H
Sbjct: 481 GPCILIDTALVDMYSKCGDLGSAQKCFDRMP-QQDLVSWSSIIAGYGSH 528



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 106/200 (53%), Gaps = 1/200 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N++V+ + +N     AL ++  MRK     D+ T+ ++L+ACA +   H GK IH 
Sbjct: 414 IVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHN 473

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F  K+ L     +  AL+ MYS+CG L SA+  FD MP +D+VSWS++I GY   G  E 
Sbjct: 474 FVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGET 533

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL +  +     I+P+ V  +S++S  +    VD G +    + ++   E   +     +
Sbjct: 534 ALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPR-LEHRACI 592

Query: 216 IDMYSKCGNLAYAKQLFNRL 235
           +D+ S+ G +  A   + R+
Sbjct: 593 VDLLSRAGRVEEAYSFYKRM 612


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/592 (34%), Positives = 347/592 (58%), Gaps = 5/592 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++  Y K  + + +L ++A MR+     D + + ++L AC+ +     GK+IH + +
Sbjct: 198 WTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVL 257

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G + D  V N LI  Y++C  + + R LFD+M  ++++SW+TMI GY +     EA++
Sbjct: 258 RRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMK 317

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALID 217
           +  EM  +  +P   A  S+++       ++ G+ +HA  ++ N + ++    +   LID
Sbjct: 318 LFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEF---VKNGLID 374

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+K   L  AK++F+ + + +V+S+  MI GY    +++E + LF EM      PS +T
Sbjct: 375 MYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLT 434

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
            +SL+     +  L+L K +H  I++ G    L   +AL+D+Y KC  ++ AR +F+ M 
Sbjct: 435 FVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMN 494

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KD+++WNA+   Y Q    ++A +L+  ++ S+ +PNE T   L++  +   +L  G+ 
Sbjct: 495 EKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQ 554

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
            H  + K GL+    +  ALVDMYAKCG +  A ++F+ +I+RD+  WN+M++ +  HG 
Sbjct: 555 FHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGE 614

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            EEAL  F +M + G++PN +TF+ +L+ACSHAG V +G + F+ M  G G+ P  EHY 
Sbjct: 615 AEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSM-PGFGIKPGTEHYA 673

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           C+V LLGR+G L EA E I+ MP+ P  IVW +LL+A ++  N  +G+ AA   +  +P+
Sbjct: 674 CVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPK 733

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           + G  +L+SNI+A    W DV  VR  M    V KEPG S +EVN  V+ FI
Sbjct: 734 DSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEVNNKVNVFI 785



 Score =  309 bits (792), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 166/525 (31%), Positives = 293/525 (55%), Gaps = 7/525 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYA-FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           L  ++S+V+ Y +      AL ++    RK+G   + F + ++++AC Q+ +   G ++H
Sbjct: 93  LITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLH 152

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           GF +++G D D YV  +LI  YS+ G++  AR +FD++  +  V+W+T+I GY + G   
Sbjct: 153 GFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSA 212

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
            +LE+  +MR  ++ P    + S++S  + +  ++ GK IHA V+R  +  ++ V++   
Sbjct: 213 VSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLR--RGTEMDVSVVNV 270

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LID Y+KC  +   ++LF+++   +++SWT MISGY++ +   E ++LF EM      P 
Sbjct: 271 LIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPD 330

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
                S++  CG    L+ G+ +HAY ++   E    + N L+DMY K   +  A+ +FD
Sbjct: 331 GFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFD 390

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M  ++V+ +NA+I  Y+    + +A ELF  M+V    P+ +T V LL +     ALE+
Sbjct: 391 VMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALEL 450

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
            K +H  I K G+ +D+   +AL+D+Y+KC  V  A  +F E   +DI +WNAM  GY  
Sbjct: 451 SKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQ 510

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKI 513
           H   EEAL  +  ++ S  KPN  TF  L+ A S+   +  G+   +++V  GL   P +
Sbjct: 511 HLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFV 570

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            +   +VD+  + G ++EA +M  S   R +++ W ++++    H
Sbjct: 571 TN--ALVDMYAKCGSIEEARKMFNSSIWR-DVVCWNSMISTHAQH 612



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 161/513 (31%), Positives = 271/513 (52%), Gaps = 35/513 (6%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           K IHG  I +GL  D +++N LI + S+   + +AR +FD+MP++++++WS+M+  Y + 
Sbjct: 47  KIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKNLITWSSMVSMYSQQ 106

Query: 151 GLPEEALEVMREMRFMDIR------PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
           G  EEAL     M F+D++      P+E  + S++     +  V+ G  +H  VVR+  D
Sbjct: 107 GYSEEAL-----MVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFD 161

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
           +   V + T+LID YSK GN+  A+ +F++L++ + V+WT +I+GY +C      + LFA
Sbjct: 162 QD--VYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFA 219

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           +M E NV P    + S++  C  +  L+ GK +HAY+LR G E  +++ N L+D Y KC 
Sbjct: 220 QMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCN 279

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            +++ R LFD M  K+++ W  +IS Y Q     +A +LF  M     +P+      +L+
Sbjct: 280 RVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLT 339

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
            C    ALE G+ +H Y  K  LE D  +K  L+DMYAK   +  A ++F     +++  
Sbjct: 340 SCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVIS 399

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           +NAM+ GY       EAL  F +M      P+ +TF+ LL   S +    E      K +
Sbjct: 400 YNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLL-GVSASLFALE----LSKQI 454

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLD---------EAHEMIKSMPLRPNMIVWGALLAAS 555
           HGL     I  +G  +DL   + L+D         +A  + + M  + +++VW A+    
Sbjct: 455 HGL-----IIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEK-DIVVWNAMFFGY 508

Query: 556 KLH-KNPSMGEIAAT-QILEIEPQNYGYNVLMS 586
             H +N    ++ +T Q    +P  + +  L++
Sbjct: 509 TQHLENEEALKLYSTLQFSRQKPNEFTFAALIT 541



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 243/477 (50%), Gaps = 12/477 (2%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           ++  +  + ++++ Y++N+    A+ ++  M + G + D F   ++L +C        G+
Sbjct: 292 VVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGR 351

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           ++H + IK  L+ D +V N LI MY++   L+ A+ +FD M  ++V+S++ MI GY    
Sbjct: 352 QVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQE 411

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
              EALE+  EMR     PS +  +S++ + A +  ++L K IH  ++      K GV++
Sbjct: 412 KLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLII------KFGVSL 465

Query: 212 ----ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
                +ALID+YSKC  +  A+ +F  +N+  +V W  M  GY +  E  E ++L++ + 
Sbjct: 466 DLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQ 525

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
                P+E T  +LI     +  L+ G+  H  +++ G +F   + NALVDMY KC  I 
Sbjct: 526 FSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIE 585

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            AR +F+    +DV+ WN++IS +AQ    ++A  +F  M    ++PN VT V +LS C+
Sbjct: 586 EARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACS 645

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWN 446
            AG +E G      +   G++        +V +  + G +  A     +  I     +W 
Sbjct: 646 HAGRVEDGLNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWR 705

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
           ++++   + G  E    +  +M  S    +  ++I L N  +  G+  + K V D+M
Sbjct: 706 SLLSACRIAGNVELGK-YAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRM 761



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 184/368 (50%), Gaps = 31/368 (8%)

Query: 10  LEQTRQCHAHIIKTHFK------------FSYTNII------------NPLTRYNSLVTS 45
           LEQ RQ HA+ IK + +            ++ +N++              +  YN+++  
Sbjct: 347 LEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEG 406

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
           Y    K S AL ++  MR         T  ++L   A +    L K+IHG  IK G+  D
Sbjct: 407 YSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLD 466

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
            +  +ALI +YS+C  +  AR++F+EM  +D+V W+ M  GY +    EEAL++   ++F
Sbjct: 467 LFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQF 526

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
              +P+E    ++++  +++A +  G+  H  +V+   D      +  AL+DMY+KCG++
Sbjct: 527 SRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLD--FCPFVTNALVDMYAKCGSI 584

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
             A+++FN      VV W  MIS + +  E  E + +F EM++E + P+ +T ++++  C
Sbjct: 585 EEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSAC 644

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMAN--ALVDMYGKCREIRSARTLFDGMK-SKDVM 342
              G ++ G  L+ +    GF       +   +V + G+  ++  A+   + M      +
Sbjct: 645 SHAGRVEDG--LNHFNSMPGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAI 702

Query: 343 IWNAVISA 350
           +W +++SA
Sbjct: 703 VWRSLLSA 710



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 90/188 (47%), Gaps = 3/188 (1%)

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           +++  +RP       LL L      +   K +H  I   GL+ D  L   L+++ +K   
Sbjct: 18  LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 77

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER-SGVKPNGITFIGLLN 485
           V+ A  +F +  ++++  W++M++ Y   G  EEAL+ FVD++R SG  PN      ++ 
Sbjct: 78  VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 137

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
           AC+  G+V +G  +   +V   G    +     ++D   + G ++EA  +   +  +   
Sbjct: 138 ACTQLGVVEKGAQLHGFVVRS-GFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEK-TA 195

Query: 546 IVWGALLA 553
           + W  ++A
Sbjct: 196 VTWTTIIA 203


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 203/575 (35%), Positives = 336/575 (58%), Gaps = 2/575 (0%)

Query: 55  ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
           A  I+  M++ G   +  T   +L A +       GK +H   +  G + D  V  AL++
Sbjct: 329 AFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVK 388

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           MY++CGS    R +F+++ NRD+++W+TMI G   GG  EEA E+  +M+   + P+++ 
Sbjct: 389 MYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKIT 448

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
            + +++   +   +  G+ IH+ VV++       +++  ALI MY++CG++  A+ LFN+
Sbjct: 449 YVILLNACVNPTALHWGREIHSRVVKD--GFMFDISVQNALISMYARCGSIKDARLLFNK 506

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           + +  ++SWT MI G  +     E + +F +M +  + P+ +T  S++  C     L  G
Sbjct: 507 MVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWG 566

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
           + +H  ++  G      +AN LV+MY  C  ++ AR +FD M  +D++ +NA+I  YA  
Sbjct: 567 RRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAH 626

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
           +   +A +LF  ++   ++P++VT + +L+ C  +G+LE  K +H+ + K G   D  L 
Sbjct: 627 NLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLG 686

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
            ALV  YAKCG  + A  +F + + R++  WNA++ G   HG G++ L  F  M+  G+K
Sbjct: 687 NALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIK 746

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
           P+ +TF+ LL+ACSHAGL+ EG+  F  M    G+ P IEHYGCMVDLLGRAG LDE   
Sbjct: 747 PDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEA 806

Query: 535 MIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANR 594
           +IK+MP + N  +WGALL A ++H N  + E AA   L+++P N    V +S++YA A  
Sbjct: 807 LIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGM 866

Query: 595 WNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           W+  A +R++M++  V KEPG S +EV   +H F+
Sbjct: 867 WDSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFV 901



 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 164/551 (29%), Positives = 297/551 (53%), Gaps = 12/551 (2%)

Query: 15  QCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKP----SSALNIYAFMRKNGSEVD 70
           Q     +K  F  +     N  ++ N L +   K+ +       A+++  ++++ G+ V+
Sbjct: 81  QSRVKFLKRWFNSNGIRYFNGRSKANKLHSHTYKDERTITGKDRAMDVVQYLQQQGARVN 140

Query: 71  NFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFD 130
           +     +LK C +V     G+E+H   I++    D Y  NALI MY +CGS+  AR +++
Sbjct: 141 SCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWN 200

Query: 131 EM--PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV 188
           ++    R V SW+ M+ GY + G  EEAL+++REM+   +       + ++S     + +
Sbjct: 201 KLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSAL 260

Query: 189 DLGKAIHACVVRNCKDEKL-GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           + G+ IH   V   K   L  V +A  +++MY+KCG++  A+++F+++   SVVSWT++I
Sbjct: 261 ECGREIH---VEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIII 317

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
            GY  C        +F +M +E V P+ IT ++++        L+ GK +H++IL  G E
Sbjct: 318 GGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHE 377

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             LA+  ALV MY KC   +  R +F+ + ++D++ WN +I   A+    ++A E++  M
Sbjct: 378 SDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQM 437

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           +   + PN++T V LL+ C    AL  G+ +H+ + K G   D+ ++ AL+ MYA+CG +
Sbjct: 438 QREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSI 497

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             A  LF++ + +DI  W AM+ G    G G EAL  F DM+++G+KPN +T+  +LNAC
Sbjct: 498 KDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNAC 557

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           S    +  G+ +  +++   GL         +V++    G + +A ++   M  R +++ 
Sbjct: 558 SSPAALDWGRRIHQQVIEA-GLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQR-DIVA 615

Query: 548 WGALLAASKLH 558
           + A++     H
Sbjct: 616 YNAMIGGYAAH 626



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 191/377 (50%), Gaps = 17/377 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++    K+   + AL ++  M++ G + +  T  +IL AC+       G+ IH   I
Sbjct: 515 WTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVI 574

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + GL  DA+V+N L+ MYS CGS+  AR +FD M  RD+V+++ MI GY    L +EAL+
Sbjct: 575 EAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALK 634

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALI 216
           +   ++   ++P +V  I+M++  A+   ++  K IH+ V+++    D  LG     AL+
Sbjct: 635 LFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLG----NALV 690

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
             Y+KCG+ + A  +F+++ + +V+SW  +I G  +     + ++LF  M  E + P  +
Sbjct: 691 STYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKPDIV 750

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           T +SL+  C   G L+ G+     + R+ G   ++     +VD+ G+  ++     L   
Sbjct: 751 TFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEALIKT 810

Query: 336 MK-SKDVMIWNAVISA---YAQAHCIDKAFELFIHMKVSKVRP-NEVTMVGLLSLCTEAG 390
           M    +  IW A++ A   +      ++A E  +     K+ P N    V L  +   AG
Sbjct: 811 MPFQANTRIWGALLGACRIHGNVPVAERAAESSL-----KLDPDNAAVYVALSHMYAAAG 865

Query: 391 ALEMGKWLHTYIEKQGL 407
             +    L   +E++G+
Sbjct: 866 MWDSAAKLRKLMEQRGV 882


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/646 (33%), Positives = 352/646 (54%), Gaps = 25/646 (3%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTN-IINPLTR---------------------YNSLVTSY 46
           N+E  R  H ++ +  F  + +N +I+  ++                     + +++  Y
Sbjct: 245 NIELCRSIHGYVFRRDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGY 304

Query: 47  IKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDA 106
             N      L ++  M+     ++  +  +   A A+ +    GKEIHG A++  +D D 
Sbjct: 305 AHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDI 364

Query: 107 YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM 166
            V+  L+ MY++CG    A+ LF  +  RD+V+WS +I    + G PEEAL + +EM+  
Sbjct: 365 LVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQ 424

Query: 167 DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLA 226
            ++P+ V ++S++   AD++ + LGK+IH   V+   D  L  +  TAL+ MY+KCG   
Sbjct: 425 KMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDL--STGTALVSMYAKCGFFT 482

Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
            A   FNR++   +V+W  +I+GY +  +    + +F ++    + P   T++ ++  C 
Sbjct: 483 AALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACA 542

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWN 345
            +  L  G  +H  I++ GFE    + NAL+DMY KC  + SA  LF+    +KD + WN
Sbjct: 543 LLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWN 602

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
            +I+AY Q     +A   F  M++    PN VT V +L       A   G   H  I + 
Sbjct: 603 VIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACIIQM 662

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
           G   + ++  +L+DMYAKCG +  + +LF+E  ++D   WNAM++GY +HG G+ A+  F
Sbjct: 663 GFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALF 722

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
             M+ S V+ + ++F+ +L+AC H GLV EG+ +F  M     + P +EHY CMVDLLGR
Sbjct: 723 SLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGR 782

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLM 585
           AGL DE    IK MP+ P+  VWGALL + ++H N  +GE+A   ++++EP+N  + V++
Sbjct: 783 AGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVL 842

Query: 586 SNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           S+IYA + RW D    R  M ++ +KK PG S VE+   VH F  G
Sbjct: 843 SSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVG 888



 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 177/606 (29%), Positives = 306/606 (50%), Gaps = 31/606 (5%)

Query: 15  QCHAHIIKTHFKF--SYTNIIN--------PLTR-------------YNSLVTSYIKNNK 51
           Q HA II + FK   S T++IN         L R             +NS++ +Y ++ +
Sbjct: 50  QIHAQIIVSGFKHHHSITHLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQ 109

Query: 52  PSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNA 111
            + AL +Y  M + G E D +T   +LKAC   L    G   HG   + GL+ D ++   
Sbjct: 110 YNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAG 169

Query: 112 LIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPS 171
           L+ MYS+ G L  AR +FD+MP RDVV+W+ MI G  +   P EA++  R M+ + + PS
Sbjct: 170 LVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPS 229

Query: 172 EVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQL 231
            V+++++      +++++L ++IH  V R         A++  LID+YSKCG++  A+++
Sbjct: 230 SVSLLNLFPGICKLSNIELCRSIHGYVFR----RDFSSAVSNGLIDLYSKCGDVDVARRV 285

Query: 232 FNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL 291
           F+++     VSW  M++GY       E + LF +M   NV  ++++ +S  +       L
Sbjct: 286 FDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDL 345

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
           + GK +H   L+   +  + +A  L+ MY KC E   A+ LF G++ +D++ W+A+I+A 
Sbjct: 346 EKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAAL 405

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
            Q    ++A  LF  M+  K++PN VT++ +L  C +   L++GK +H +  K  ++ D+
Sbjct: 406 VQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDL 465

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
              TALV MYAKCG    A   F+    RDI  WN+++ GY   G    A+  F  +  S
Sbjct: 466 STGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLS 525

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
            + P+  T +G++ AC+    + +G  +   +V  LG          ++D+  + G L  
Sbjct: 526 AINPDAGTMVGVVPACALLNDLDQGTCIHGLIVK-LGFESDCHVKNALIDMYAKCGSLPS 584

Query: 532 AHEMIKSMPLRPNMIVWGALLAA--SKLHKNPSMGEIAATQILEIEPQNYGY-NVLMSNI 588
           A  +        + + W  ++AA     H   ++      ++    P +  + +VL +  
Sbjct: 585 AEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAA 644

Query: 589 YAVANR 594
           Y  A R
Sbjct: 645 YLAAFR 650


>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 208/591 (35%), Positives = 346/591 (58%), Gaps = 5/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++  Y +  +   A ++Y  MR+ G +  + T+  +L    +++  HL + +H   I
Sbjct: 117 WTTMIGCYTRAGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELV--HL-QCLHACVI 173

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G   D  ++N+++ +Y +CG +  A+ LF+ M  RDV+SW++++ GY + G   E L+
Sbjct: 174 QYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQ 233

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++  M+   I P +    S+VS  A  + + +GK +H  ++R   ++     I T+LI M
Sbjct: 234 LLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQD--SHIETSLIGM 291

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCGN+  A ++F  +    V+SWT MISG ++ +  +  V +F  M++  V PS  TI
Sbjct: 292 YLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATI 351

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +G   LG  +H YILR   +  +   N+LV MY KC  +  + ++FD M  
Sbjct: 352 ASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSR 411

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +D++ WNA++S +AQ   + KA  LF  M+ ++ RP+ +T+V LL  C   GAL  GKW+
Sbjct: 412 RDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWI 471

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ K  L   +++ TALVDMY+KCGD+  A + F     +D+  W++++AGYG HG G
Sbjct: 472 HNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKG 531

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           E AL  + D   +G++PN + ++ +L+ACSH GLV +G S F  M    G+ P++EH  C
Sbjct: 532 ETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRAC 591

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VDLL RAG ++EA+   K M  +P+M V G LL A +   N  +G+I A +I+ ++P N
Sbjct: 592 IVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPAN 651

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            G  V +++ YA   RW+ V  V   MK + +KK PG+S +E++G +  F 
Sbjct: 652 AGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFIELHGTITTFF 702



 Score =  299 bits (765), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 169/529 (31%), Positives = 284/529 (53%), Gaps = 8/529 (1%)

Query: 31  NIINPLTR-YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL 89
           + +NP T+ YN+++            L  Y+ M    +  D  T P+++KAC  + +   
Sbjct: 7   SFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSH 66

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G   H   I +G   D+Y++ +LI  YS+ G   SAR +FD M +R+VV W+TMI  Y R
Sbjct: 67  GLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTR 126

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
            G  + A  +   MR   I+PS V M+ ++S   ++  +   + +HACV++        V
Sbjct: 127 AGEHDVAFSMYNIMRRQGIQPSSVTMLGLLSGVLELVHL---QCLHACVIQYGFGSD--V 181

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
           A+A +++++Y KCG +  A+ LF  ++   V+SW  ++SGY +   I E ++L   M  +
Sbjct: 182 ALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTD 241

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            + P + T  SL+        L +GK +H +ILR G E    +  +L+ MY KC  + SA
Sbjct: 242 GIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSA 301

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             +F+GM  KDV+ W A+IS   Q  C D A  +F  M  S+V P+  T+  +L+ C E 
Sbjct: 302 FRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAEL 361

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           G+  +G  +H YI +Q +++D+  + +LV MYAKCG +  +  +F     RDI  WNA++
Sbjct: 362 GSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIV 421

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           +G+  +G   +AL+ F +M ++  +P+ IT + LL AC+  G + +GK + +  V    L
Sbjct: 422 SGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHN-FVTKSCL 480

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            P I     +VD+  + G L  A +    MP + +++ W +++A    H
Sbjct: 481 GPCILIDTALVDMYSKCGDLGSAQKCFDRMP-QQDLVSWSSIIAGYGSH 528



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 106/200 (53%), Gaps = 1/200 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N++V+ + +N     AL ++  MRK     D+ T+ ++L+ACA +   H GK IH 
Sbjct: 414 IVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHN 473

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F  K+ L     +  AL+ MYS+CG L SA+  FD MP +D+VSWS++I GY   G  E 
Sbjct: 474 FVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGET 533

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL +  +     I+P+ V  +S++S  +    VD G +    + ++   E   +     +
Sbjct: 534 ALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPR-LEHRACI 592

Query: 216 IDMYSKCGNLAYAKQLFNRL 235
           +D+ S+ G +  A   + R+
Sbjct: 593 VDLLSRAGRVEEAYSFYKRM 612


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 219/605 (36%), Positives = 353/605 (58%), Gaps = 6/605 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N+L + Y+ ++    A++++  M  +G   + F++ +++  C  +  +  G++IHG
Sbjct: 76  VVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHG 135

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + IK G D DA+ +NAL+ MY++ G L  A  +FDE+   D+VSW+ +I G         
Sbjct: 136 YLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHR 195

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIAT 213
           ALE++REM    + P+   + S +   A +A  +LG+ +H+ +++     D  LGV    
Sbjct: 196 ALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVG--- 252

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
            LIDMYSKC ++  A+ +F  + +  +++W  +ISG+ +  E  E   LF  M  E +  
Sbjct: 253 -LIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGF 311

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           ++ T+ +++     +    + + +HA  L++GFEF   + N+L+D YGKC  +  A  +F
Sbjct: 312 NQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVF 371

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           +     D++++ ++++AYAQ    ++A  L++ M+   ++P+      LL+ C    A E
Sbjct: 372 EESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYE 431

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            GK +H +I K G   D+    +LV+MYAKCG +  A   FS    R I  W+AM+ G  
Sbjct: 432 QGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLA 491

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            HG G+EAL  F  M + GV PN IT + +L AC+HAGLV E K  F+ M    G+ P  
Sbjct: 492 QHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQ 551

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHY CM+DLLGRAG L+ A E++  MP + N +VWGALL A+++HKN  +GE AA  +L 
Sbjct: 552 EHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEMLLA 611

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGM 633
           +EP+  G +VL++NIYA    W+ VA VRR+MK+ +VKKEPG S +EV   V+ FI G  
Sbjct: 612 LEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIVGDR 671

Query: 634 VNWKS 638
            + +S
Sbjct: 672 SHSRS 676



 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 147/493 (29%), Positives = 256/493 (51%), Gaps = 4/493 (0%)

Query: 66  GSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSA 125
           G + + F  P++LKAC       LGK++HG  +  G D D +V+N+L+ +Y++CG    A
Sbjct: 5   GIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDA 64

Query: 126 RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV 185
           R LFD +P+R VVSW+ +   Y    +  EA+ +  +M    IRP+E ++ SM+++   +
Sbjct: 65  RSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL 124

Query: 186 ADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
            D   G+ IH  +++   D       A AL+DMY+K G L  A  +F+ + +  +VSW  
Sbjct: 125 EDSVQGRKIHGYLIKLGYDSD--AFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNA 182

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
           +I+G +     +  + L  EM +  + P+  T+ S +  C  +   +LG+ LH+ +++  
Sbjct: 183 IIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMD 242

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
                 +   L+DMY KC  +  AR +F  M  +D++ WNAVIS ++Q    ++A  LF 
Sbjct: 243 MGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFP 302

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            M    +  N+ T+  +L       A  M + +H    K G E D  +  +L+D Y KCG
Sbjct: 303 LMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCG 362

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
            V  A R+F E+   D+ ++ +++  Y   G GEEAL  +++M+  G+KP+      LLN
Sbjct: 363 HVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLN 422

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
           AC+      +GK V   ++   G +  I     +V++  + G +++A      +P+R  +
Sbjct: 423 ACASLSAYEQGKQVHVHILK-FGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVR-GI 480

Query: 546 IVWGALLAASKLH 558
           + W A++     H
Sbjct: 481 VSWSAMIGGLAQH 493



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 203/419 (48%), Gaps = 15/419 (3%)

Query: 163 MRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC 222
           M  + I+ +E A  S++       D+ LGK +H  VV    D    VA   +L+ +Y+KC
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVA--NSLVILYAKC 58

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI 282
           G    A+ LF+ +   SVVSW  + S Y+  +   E V LF +M+   + P+E ++ S+I
Sbjct: 59  GGFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMI 118

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
             C  +     G+ +H Y+++ G++     ANALVDMY K   +  A ++FD +   D++
Sbjct: 119 NVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIV 178

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
            WNA+I+         +A EL   M  S + PN  T+   L  C      E+G+ LH+ +
Sbjct: 179 SWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSL 238

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
            K  +  D  L   L+DMY+KC  ++ A  +F     RD+  WNA+++G+  +   EEA 
Sbjct: 239 IKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAA 298

Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH----YGC 518
             F  M   G+  N  T   +L +     +     +   + +H L L    E        
Sbjct: 299 SLFPLMHTEGIGFNQTTLSTVLKS-----IAALQANYMCRQIHALSLKSGFEFDNYVVNS 353

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           ++D  G+ G +++A  + +  P+  +++++ +L+ A   +     GE A    LE++ +
Sbjct: 354 LIDTYGKCGHVEDATRVFEESPI-VDLVLFTSLVTA---YAQDGQGEEALRLYLEMQDR 408


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/646 (35%), Positives = 349/646 (54%), Gaps = 55/646 (8%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+   +K       L  Y  M++ G   D++T P +LKAC ++     G  +H    
Sbjct: 95  WNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVC 154

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR---DVVSWSTMIRGYHRGGLPEE 155
            NGL  + ++ N+++ MY  CG+L  A  +FDE+  R   D+VSW++++  Y +GG    
Sbjct: 155 ANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRT 214

Query: 156 ALEVMREM---RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
           AL +   M     + +RP  + +++++   A V  +  GK +H   VRN   +   V + 
Sbjct: 215 ALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDD--VFVG 272

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN-- 270
            AL+ MY+KC  +  A ++F  + +  VVSW  M++GY +    +  + LF  M EE+  
Sbjct: 273 NALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIK 332

Query: 271 ------------------------VF---------PSEITILSLIIECGFVGGLQLGKWL 297
                                   VF         P+ +T+ SL+  C  VG L  GK  
Sbjct: 333 LDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQT 392

Query: 298 HAYILRNGF-------EFSLAMANALVDMYGKCREIRSARTLFDGMKSKD--VMIWNAVI 348
           HAY+++N         E  L + N L+DMY KC+  R AR++FD ++ KD  V+ W  +I
Sbjct: 393 HAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMI 452

Query: 349 SAYAQAHCIDKAFELF--IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
             YAQ    + A +LF  I  + + ++PN  T+   L  C   G L +G+ LH Y  +  
Sbjct: 453 GGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNE 512

Query: 407 LEVDVI-LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
            E +V+ +   L+DMY+K GD++ A  +F     R++  W ++M GYGMHG GEEAL  F
Sbjct: 513 NESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLF 572

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
             M++ G   +GITF+ +L ACSH+G+V +G   F  MV G G+ P  EHY CMVDLLGR
Sbjct: 573 DQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGR 632

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLM 585
           AG L+EA E+IK+M + P  +VW ALL+AS++H N  +GE AA+++ E+  +N G   L+
Sbjct: 633 AGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEYAASKLTELGAENDGSYTLL 692

Query: 586 SNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           SN+YA A RW DVA +R +MK   ++K PG S ++       F  G
Sbjct: 693 SNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKSTTTFFVG 738



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 246/475 (51%), Gaps = 52/475 (10%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV----DNFTIPTILKACAQVLMTH 88
           I  +  +NS++ +Y++  +  +AL I AF   N   +    D  T+  IL ACA V    
Sbjct: 193 IEDIVSWNSILAAYVQGGQSRTALRI-AFRMGNHYSLKLRPDAITLVNILPACASVFALQ 251

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
            GK++HGF+++NGL  D +V NAL+ MY++C  +  A  +F+ +  +DVVSW+ M+ GY 
Sbjct: 252 HGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYS 311

Query: 149 RGGLPE-----------------------------------EALEVMREMRFMDIRPSEV 173
           + G  +                                   EAL+V R+M+   + P+ V
Sbjct: 312 QIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVV 371

Query: 174 AMISMVSLFADVADVDLGKAIHACVVRNC-----KDEKLGVAIATALIDMYSKCGNLAYA 228
            + S++S  A V  +  GK  HA V++N       D++  + +   LIDMY+KC +   A
Sbjct: 372 TLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVA 431

Query: 229 KQLFNRL--NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE--NVFPSEITILSLIIE 284
           + +F+ +     +VV+WTVMI GY +  E N+ ++LFA++ ++  ++ P+  T+   ++ 
Sbjct: 432 RSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMA 491

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFS-LAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
           C  +G L+LG+ LHAY LRN  E   L + N L+DMY K  +I +AR +FD MK ++V+ 
Sbjct: 492 CARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVS 551

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-WLHTYI 402
           W ++++ Y      ++A  LF  M+      + +T + +L  C+ +G ++ G  + H  +
Sbjct: 552 WTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMV 611

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
           +  G+         +VD+  + G +N A  L    ++     +W A+++   +H 
Sbjct: 612 KGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHA 666



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 173/364 (47%), Gaps = 16/364 (4%)

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++  + F     +    I ++SL      +   K  H  +  +   E    A+       
Sbjct: 14  LITSVHFYSTFTTSPPTIPLISLLRQCKTLINAKLAHQQIFVHGFTEMFSYAVGA----- 68

Query: 219 YSKCGNLAYAKQLFNRL--NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           Y +CG  A A  L  RL  + ++V  W  +I   ++   +++ +  + +M      P   
Sbjct: 69  YIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHY 128

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T   ++  CG +  L+ G  +HA +  NG   ++ + N++V MYG+C  +  A  +FD +
Sbjct: 129 TFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEV 188

Query: 337 ---KSKDVMIWNAVISAYAQA----HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
              K +D++ WN++++AY Q       +  AF +  H  + K+RP+ +T+V +L  C   
Sbjct: 189 LERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSL-KLRPDAITLVNILPACASV 247

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            AL+ GK +H +  + GL  DV +  ALV MYAKC  +N A ++F     +D+  WNAM+
Sbjct: 248 FALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMV 307

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
            GY   G  + AL  F  M+   +K + IT+  ++   +  G   E   VF +M    GL
Sbjct: 308 TGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQM-QLYGL 366

Query: 510 VPKI 513
            P +
Sbjct: 367 EPNV 370



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 16/290 (5%)

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P  I ++SL+ +C  +   +L    H  I  +GF    + A   V  Y +C     A +L
Sbjct: 28  PPTIPLISLLRQCKTLINAKLA---HQQIFVHGFTEMFSYA---VGAYIECGASAEAVSL 81

Query: 333 FDGM--KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
              +      V  WNA+I    +   +D     +  M+     P+  T   +L  C E  
Sbjct: 82  LQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIP 141

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR---DICMWNA 447
           +L  G  +H  +   GL  +V +  ++V MY +CG ++ A+++F E + R   DI  WN+
Sbjct: 142 SLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNS 201

Query: 448 MMAGYGMHGCGEEALIFFVDMERS---GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           ++A Y   G    AL     M       ++P+ IT + +L AC+    +  GK V    V
Sbjct: 202 ILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSV 261

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
              GLV  +     +V +  +   ++EA+++ + +  + +++ W A++  
Sbjct: 262 RN-GLVDDVFVGNALVSMYAKCSKMNEANKVFEGIK-KKDVVSWNAMVTG 309


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 216/580 (37%), Positives = 337/580 (58%), Gaps = 2/580 (0%)

Query: 50  NKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVS 109
           N  S A+ +     + G   D+F    +LK C +       K++H   IK+ ++ +A+V 
Sbjct: 7   NTLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVM 66

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
           N L+ +Y ECG L  AR +FD +  +   SW+ MI GY      E+A+ + REM    ++
Sbjct: 67  NNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQ 126

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           P+    + ++   A ++ +  GK +HAC+     +    V + TAL+ MY KCG++  A+
Sbjct: 127 PNAGTYMIILKACASLSALKWGKEVHACIRHGGLESD--VRVGTALLRMYGKCGSINEAR 184

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           ++F+ L  + ++SWTVMI  Y +     E  RL  +M +E   P+ IT +S++  C   G
Sbjct: 185 RIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEG 244

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
            L+  K +H + L  G E  + +  ALV MY K   I  AR +FD MK +DV+ WN +I 
Sbjct: 245 ALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIG 304

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
           A+A+     +A++LF+ M+    +P+ +  + +L+ C  AGALE  K +H +    GLEV
Sbjct: 305 AFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEV 364

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           DV + TALV MY+K G ++ A  +F     R++  WNAM++G   HG G++AL  F  M 
Sbjct: 365 DVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMT 424

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
             GVKP+ +TF+ +L+ACSHAGLV EG+S +  M    G+ P + H  CMVDLLGRAG L
Sbjct: 425 AHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRL 484

Query: 530 DEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIY 589
            EA   I +M + P+   WGALL + + + N  +GE+ A + L+++P+N    VL+SNIY
Sbjct: 485 MEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIY 544

Query: 590 AVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           A A +W+ V+ VR +M+E  ++KEPG S +EV+  +H F+
Sbjct: 545 AEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFL 584



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 149/459 (32%), Positives = 239/459 (52%), Gaps = 13/459 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y+++     A+ ++  M   G + +  T   ILKACA +     GKE+H    
Sbjct: 97  WNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIR 156

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             GL+ D  V  AL++MY +CGS+  AR +FD + N D++SW+ MI  Y + G  +EA  
Sbjct: 157 HGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYR 216

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE--KLGVAIATALI 216
           +M +M     +P+ +  +S+++  A    +   K +H    R+  D   +L V + TAL+
Sbjct: 217 LMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVH----RHALDAGLELDVRVGTALV 272

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
            MY+K G++  A+ +F+R+    VVSW VMI  +      +E   LF +M  E   P  I
Sbjct: 273 QMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAI 332

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
             LS++  C   G L+  K +H + L +G E  + +  ALV MY K   I  AR +FD M
Sbjct: 333 MFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRM 392

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           K ++V+ WNA+IS  AQ      A E+F  M    V+P+ VT V +LS C+ AG ++ G+
Sbjct: 393 KVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGR 452

Query: 397 WLHTYIEK-QGLEVDVILKTALVDMYAKCGDVNGAYRLFSE--AIYRDICMWNAMMAGYG 453
             +  + +  G+E DV     +VD+  + G +  A +LF +  A+  D   W A++    
Sbjct: 453 SQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEA-KLFIDNMAVDPDEATWGALLGSCR 511

Query: 454 MHGCGEEALIFFVDMERSGVKP-NGITFIGLLNACSHAG 491
            +G  E  L   V  ER  + P N  T++ L N  + AG
Sbjct: 512 TYGNVE--LGELVAKERLKLDPKNAATYVLLSNIYAEAG 548



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 107/203 (52%), Gaps = 1/203 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +N ++ ++ ++ +   A +++  M+  G + D     +IL ACA        K+
Sbjct: 293 VRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKK 352

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IH  A+ +GL+ D  V  AL+ MYS+ GS+  AR +FD M  R+VVSW+ MI G  + GL
Sbjct: 353 IHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGL 412

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            ++ALEV R M    ++P  V  ++++S  +    VD G++ +  + +    E   V+  
Sbjct: 413 GQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEP-DVSHC 471

Query: 213 TALIDMYSKCGNLAYAKQLFNRL 235
             ++D+  + G L  AK   + +
Sbjct: 472 NCMVDLLGRAGRLMEAKLFIDNM 494


>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
 gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 223/613 (36%), Positives = 353/613 (57%), Gaps = 4/613 (0%)

Query: 17  HAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPT 76
           H  I K    F    +  P+T + +++T Y K+ +   +L ++  M ++    D + + +
Sbjct: 190 HGEIDKARLVFDGLVLKTPVT-WTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSS 248

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           IL AC+ +     GK+IH + +++    D    N LI  Y++CG + + + LFD +  ++
Sbjct: 249 ILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKN 308

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           ++SW+TMI GY +     EA+E++ EM  M  +P E A  S+++    V  +  G+ IH+
Sbjct: 309 IISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHS 368

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
            V++ C +    V    ALIDMYSKC  L  AK++F+ +  +SVV +  MI GY R   +
Sbjct: 369 YVIKVCLEHDNFVT--NALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYL 426

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
              + +F EM  ++V PS +T +SL+     +  LQL K +H  I++ GF      ++AL
Sbjct: 427 CGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSAL 486

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           +D+Y KC  IR AR +F+G  +KD+++WN++ S Y      ++AF+L+  +++S+ RPNE
Sbjct: 487 IDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNE 546

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
            T   L +  +   +L  G+  H  + K GLE D  +  ALVDMYAKCG V  A ++FS 
Sbjct: 547 FTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSS 606

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
           ++++D   WN+M++ Y  HG  EEAL  F  M  + + PN +TF+ +L+ACSH G V +G
Sbjct: 607 SVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDG 666

Query: 497 KSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
              ++ M    G+ P IEHY  +V LLGRAG L EA E I+ M +RP  +VW +LL+A +
Sbjct: 667 LQHYNSMAR-YGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSACR 725

Query: 557 LHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGF 616
           +  N  + + AA   + I+P + G  V++SNI+A    W DV  +R  M    V KEPG 
Sbjct: 726 VFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVNGVVKEPGQ 785

Query: 617 SSVEVNGLVHKFI 629
           S +EVNG VH F+
Sbjct: 786 SWIEVNGEVHIFV 798



 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 158/524 (30%), Positives = 277/524 (52%), Gaps = 5/524 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIY-AFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           L  ++S+V+ Y +      AL  +  F R    +++ + + +I++AC Q      G ++H
Sbjct: 106 LVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVH 165

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
            + IK+G   D YV  +L+ +Y++ G +  AR +FD +  +  V+W+ +I GY + G  E
Sbjct: 166 SYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSE 225

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
            +L++   M   ++ P +  + S+++  + +  +  GK IHA V+R+  + K+ V+    
Sbjct: 226 VSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRS--ETKMDVSTYNV 283

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LID Y+KCG +   K LF+RL+  +++SWT MI+GY++ +   E V L  EM      P 
Sbjct: 284 LIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPD 343

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           E    S++  CG V  LQ G+ +H+Y+++   E    + NAL+DMY KC  +  A+ +FD
Sbjct: 344 EYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFD 403

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            +    V+ +NA+I  Y++   +  A E+F  M++  V P+ +T V LL L      L++
Sbjct: 404 VVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQL 463

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
            K +H  I K G  +D    +AL+D+Y+KC  +  A  +F     +DI +WN++ +GY +
Sbjct: 464 SKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNL 523

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
               EEA   + D++ S  +PN  TF  L  A S    +  G+  F   V  +GL     
Sbjct: 524 QLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQ-FHNQVMKMGLESDPF 582

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
               +VD+  + G ++EA E I S  +  +   W ++++    H
Sbjct: 583 ITNALVDMYAKCGSVEEA-EKIFSSSVWKDTACWNSMISMYAQH 625



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/480 (29%), Positives = 248/480 (51%), Gaps = 27/480 (5%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           +++H   +  GL  D ++SN L+  Y + GS+  A  LFD+MPNR++VSWS+++  Y + 
Sbjct: 60  RKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQL 119

Query: 151 GLPEEALEVMREMRFMDI-RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
           G  E+AL    E +   + + +E  + S++         + G  +H+ V+++   E   V
Sbjct: 120 GYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGED--V 177

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            + T+L+ +Y+K G +  A+ +F+ L   + V+WT +I+GY +       ++LF  M+E 
Sbjct: 178 YVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQLFNLMMES 237

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
           NV P +  + S++  C  +G L+ GK +HAY+LR+  +  ++  N L+D Y KC  +++ 
Sbjct: 238 NVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAG 297

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           + LFD +  K+++ W  +I+ Y Q     +A EL   M     +P+E     +L+ C   
Sbjct: 298 KALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSV 357

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            AL+ G+ +H+Y+ K  LE D  +  AL+DMY+KC  ++ A R+F       +  +NAM+
Sbjct: 358 DALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMI 417

Query: 450 AGYGMHG--CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
            GY   G  CG  AL  F +M    V P+ +TF+ LL   +    +        K +HGL
Sbjct: 418 EGYSRQGYLCG--ALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQ-----LSKQIHGL 470

Query: 508 GLVPKIEHYGCMVDLLGRAGLLD---------EAHEMIKSMPLRPNMIVWGALLAASKLH 558
                I  YG  +D    + L+D         +A  + +      +++VW +L +   L 
Sbjct: 471 -----IIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTT-NKDIVVWNSLFSGYNLQ 524


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 221/619 (35%), Positives = 365/619 (58%), Gaps = 9/619 (1%)

Query: 15  QCHAHIIKTHFKFSYTNIINP--LTRYNSLVTSYIKNNKPSSALNIY-AFMRKNGSEVDN 71
            CH +    H K  + N+ NP  ++ +N L+  Y KN     AL ++   +     + D+
Sbjct: 50  SCHLY---DHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDS 106

Query: 72  FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE 131
           +T P++LKAC  +    LGK IH   +K GL  D  V ++L+ MY++C +   A +LF+E
Sbjct: 107 YTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNE 166

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           MP +DV  W+T+I  Y++ G  +EALE    MR     P+ V + + +S  A + D++ G
Sbjct: 167 MPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRG 226

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
             IH  ++ +     L   I++AL+DMY KCG+L  A ++F ++ + +VV+W  MISGY 
Sbjct: 227 MEIHEELINS--GFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYG 284

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
              +    ++LF  M  E V P+  T+ SLI+ C     L  GK++H Y +RN  +  + 
Sbjct: 285 LKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVF 344

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           + ++L+D+Y KC ++  A  +F  +    V+ WN +IS Y     + +A  LF  M+ S 
Sbjct: 345 INSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSY 404

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           V P+ +T   +L+ C++  ALE G+ +H  I ++ L+ + ++  AL+DMYAKCG V+ A+
Sbjct: 405 VEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAF 464

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
            +F     RD+  W +M+  YG HG    AL  F +M +S +KP+ +TF+ +L+AC HAG
Sbjct: 465 SVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAG 524

Query: 492 LVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP-LRPNMIVWGA 550
           LV EG   F++MV+  G++P++EHY C++DLLGRAG L EA+E+++  P +R ++ +   
Sbjct: 525 LVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLST 584

Query: 551 LLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRV 610
           L +A +LH+N  +G   A  +++ +P +    +L+SN+YA A++W++V  VR  MKE+ +
Sbjct: 585 LFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGL 644

Query: 611 KKEPGFSSVEVNGLVHKFI 629
           KK PG S +E+N  +  F 
Sbjct: 645 KKNPGCSWIEINQKILPFF 663



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 12/181 (6%)

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
           ++ LL  C  + +L+ GK +H  +   GL+ D+ L   L+++Y  C   + A  +F    
Sbjct: 6   LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNME 65

Query: 439 YR-DICMWNAMMAGYGMHGCGEEALIFFVD-MERSGVKPNGITFIGLLNACSHAGLVTEG 496
              +I +WN +MAGY  +    EAL  F   +    +KP+  T+  +L AC   GL    
Sbjct: 66  NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKAC--GGLY--- 120

Query: 497 KSVFDKMVHG----LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           K V  KM+H      GL+  I     +V +  +    ++A  +   MP   ++  W  ++
Sbjct: 121 KYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMP-EKDVACWNTVI 179

Query: 553 A 553
           +
Sbjct: 180 S 180


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 207/602 (34%), Positives = 356/602 (59%), Gaps = 3/602 (0%)

Query: 30  TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL 89
           T  I  +  ++S+V ++++N + S  L++++ M     E D+ T+ ++ +AC+++    L
Sbjct: 160 TMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRL 219

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G+ +HG+ ++  ++ +A ++N+LI MY + G L SA  LF+ +P R    W+ MI  Y++
Sbjct: 220 GRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQ 279

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
            G  +EAL V  +M+   + P++V M+ ++   A +  V  G+++H  V+R   D +L  
Sbjct: 280 SGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDF 339

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            +  AL+++Y+  GNL    ++F  + + +++SW  +IS + R  +  E + LF +M  +
Sbjct: 340 -LGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQ 398

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            + P   ++ S +  CG +   QLG  +H YI++ G  F+  + NAL+DMY KC  + SA
Sbjct: 399 GLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSA 457

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             +F+ +K K ++ WN++I  ++Q     +A  LF  M ++ V+ +++T + ++  C+  
Sbjct: 458 NKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHL 517

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           G LE GKW+H  +   GL  D  L TAL DMY+KCG++  A+ +F     R I  W+ M+
Sbjct: 518 GYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMI 577

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           AGYGMHG     +  F  M  SG+KPN ITF+ +L+ACSHAG V EGK  F+ M    G+
Sbjct: 578 AGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSE-FGV 636

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            PK +H+ CMVDLL RAG L+ A+++I S+P   N  +WGALL   ++HK   + +    
Sbjct: 637 EPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEK 696

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            +L+++  + GY  L+SNIYA    W+    VR +MK   ++K PG+S++E++  +++F 
Sbjct: 697 NLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFG 756

Query: 630 RG 631
            G
Sbjct: 757 PG 758



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 156/530 (29%), Positives = 284/530 (53%), Gaps = 12/530 (2%)

Query: 42  LVTSYIKNNKPSSALNIYAFM-RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
           L+  Y+       A+++Y  M  ++ +++ NF  P++LKAC+      +G ++HG  IK 
Sbjct: 70  LIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKC 129

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G + DA V  +L+ MY E   L  A   FD MP RDVV+WS+++  + + G   E L++ 
Sbjct: 130 GFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMF 189

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
            +M    + P  V M+S+    +++  + LG+++H  VVR  ++ +   ++  +LI MY 
Sbjct: 190 SQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVR--REIESNASLNNSLIVMYG 247

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           K G+L  A++LF  +       WT MIS Y +     E + +FA+M E  + P+++T++ 
Sbjct: 248 KLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVG 307

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLA-MANALVDMYGKCREIRSARTLFDGMKSK 339
           ++  C  +G ++ G+ +H +++R   +  L  +  AL+++Y     +R    +F+ +K K
Sbjct: 308 VLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEK 367

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
            ++ WN +IS + +    ++A  LF+ M+   + P+  ++   LS C      ++G  +H
Sbjct: 368 TILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIH 427

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
            YI K G   D + + AL+DMYAKCG V+ A ++F +   + +  WN+M+ G+  +G   
Sbjct: 428 GYIIKTGNFNDFV-QNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSV 486

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           EA+  F  M  + VK + +TF+ ++ ACSH G + +GK V  K++   GL         +
Sbjct: 487 EAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIM-YGLRKDSYLDTAL 545

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            D+  + G L  AH +   M  R +++ W  ++A   +H     G+I AT
Sbjct: 546 TDMYSKCGELQMAHGVFDRMSER-SIVSWSVMIAGYGMH-----GQINAT 589



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 127/483 (26%), Positives = 251/483 (51%), Gaps = 11/483 (2%)

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           +P   +      +T L    H      GL      S  LI+ Y++ G   S++ +FD  P
Sbjct: 5   MPLFRRCATSTTLTQL----HAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFP 60

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGK 192
             D   W  +I+ Y  GG  EEA+ +  EM + D  + S     S++   +   D+ +G 
Sbjct: 61  KPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGG 120

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
            +H  V++ C  E   V + T+L+ MY +   L  A + F+ +    VV+W+ ++  +++
Sbjct: 121 KVHGRVIK-CGFESDAV-VETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQ 178

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
             + +EG+ +F++MI E V P  +T+LS+   C  +G L+LG+ +H Y++R   E + ++
Sbjct: 179 NGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASL 238

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
            N+L+ MYGK  ++ SA  LF+ +  +    W  +IS Y Q+ C  +A  +F  M+  K+
Sbjct: 239 NNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKM 298

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV-ILKTALVDMYAKCGDVNGAY 431
            PN+VTMVG+L  C   G ++ G+ +H ++ ++ ++ ++  L  AL+++YA  G++   +
Sbjct: 299 EPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCH 358

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
           ++F     + I  WN +++ +  +G  EEAL+ FV M+  G+ P+  +    L+AC    
Sbjct: 359 KVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTIS 418

Query: 492 LVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
               G  +   ++        +++   ++D+  + G +  A++M + +  + +++ W ++
Sbjct: 419 FSQLGAQIHGYIIKTGNFNDFVQN--ALIDMYAKCGFVHSANKMFEKIKEK-SLVTWNSM 475

Query: 552 LAA 554
           +  
Sbjct: 476 ICG 478



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 182/356 (51%), Gaps = 12/356 (3%)

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI-EEN 270
           +T LI+ Y++ G    +K++F+   +     W V+I  Y+      E V L+ EM+ ++ 
Sbjct: 36  STKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQ 95

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
              S     S++  C   G L +G  +H  +++ GFE    +  +L+ MYG+   +  A 
Sbjct: 96  TQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDAC 155

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
             FD M  +DV+ W++++  + Q     +  ++F  M    V P+ VTM+ +   C+E G
Sbjct: 156 KAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELG 215

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           +L +G+ +H Y+ ++ +E +  L  +L+ MY K GD+  A RLF     R    W  M++
Sbjct: 216 SLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMIS 275

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL--- 507
            Y   GC +EAL  F  M+   ++PN +T +G+L AC+  G V EG+S     VHG    
Sbjct: 276 CYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRS-----VHGFVIR 330

Query: 508 -GLVPKIEHYG-CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
             + P+++  G  +++L    G L + H++ +++  +  ++ W  L++    +  P
Sbjct: 331 RAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEK-TILSWNTLISIFTRNGQP 385


>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 853

 Score =  410 bits (1054), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/595 (35%), Positives = 350/595 (58%), Gaps = 5/595 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y K     S +  ++ MR +    +  T   +L  CA  L+  LG ++HG  +
Sbjct: 203 WNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV 262

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +GLD +  + N+L+ MYS+CG    A  LF  M   D V+W+ MI GY + GL EE+L 
Sbjct: 263 VSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLI 322

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
              EM    + P  +   S++   +   +++  + IH  ++R+     L + + +ALID 
Sbjct: 323 FFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRH--SISLDIFLTSALIDA 380

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-EGVRLFAEMIEENVFPSEIT 277
           Y KC  ++ A+++F++ N   VV +T MISGY+  N +N + + +F  +++  + P+EIT
Sbjct: 381 YFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLH-NGLNIDALEMFRWLVKVKISPNEIT 439

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++S++   G +  L+LG+ LH +I++ GF+    +  A++DMY KC  +  A  +F  + 
Sbjct: 440 LVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLS 499

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +D++ WN++I+  AQ+     A ++F  M VS +  + V++   LS C    +   GK 
Sbjct: 500 KRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKA 559

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H ++ K  L +DV  ++ L+DMYAKCG++  A  +F     ++I  WN+++A YG HG 
Sbjct: 560 IHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGK 619

Query: 458 GEEALIFFVDM-ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
            +++L  F +M E+SG +P+ ITF+ +++ C H G V EG   F  M    G+ P+ EHY
Sbjct: 620 LKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHY 679

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            C+VDL GRAG L EA+E +KSMP  P+  VWG LL AS+LHKN  + ++A++++++++P
Sbjct: 680 ACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLDP 739

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            N GY VL+SN +A    W  V  VR +MKE  V+K PG+S +E+N + H F+ G
Sbjct: 740 WNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYSWIEINKITHLFVSG 794



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 160/528 (30%), Positives = 272/528 (51%), Gaps = 8/528 (1%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           ++ +  +NS+++S+++    + AL  Y  M   G   D  T P ++KAC   L    G E
Sbjct: 96  LSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV-ALKNFKGIE 154

Query: 93  IHGFAIKN-GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
                + + G+D + +V+++LI+ Y E G +  A  LFD +  +D V W+ M+ GY + G
Sbjct: 155 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCG 214

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
             +  ++    MR   I P+ V    ++S+ A    +DLG  +H  VV +  D     +I
Sbjct: 215 ASDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLD--FEGSI 272

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
             +L+ MYSKCG    A +LF  +++   V+W  MISGY++   + E +  F EMI   V
Sbjct: 273 KNSLLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGV 332

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P  IT  SL+        L+  + +H YI+R+     + + +AL+D Y KCR +  A+ 
Sbjct: 333 LPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQK 392

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +F    S DV+++ A+IS Y        A E+F  +   K+ PNE+T+V +L +     A
Sbjct: 393 IFSQCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLA 452

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L++G+ LH +I K+G +    +  A++DMYAKCG +N AY +F     RDI  WN+M+  
Sbjct: 453 LKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITR 512

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLV 510
                    A+  F  M  SG+  + ++    L+AC++    + GK++   M+ H L L 
Sbjct: 513 CAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLAL- 571

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             +     ++D+  + G L  A  +  +M  + N++ W +++AA   H
Sbjct: 572 -DVYSESTLIDMYAKCGNLKAAMNVFDTMKEK-NIVSWNSIIAAYGNH 617



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/536 (25%), Positives = 259/536 (48%), Gaps = 32/536 (5%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPT----ILKACAQVLMTHLGKEIHG 95
           +S+   ++   K     N Y F+ +        T+P     +L+ C+ + +   GK++H 
Sbjct: 4   SSVAKRFVPYKKSLPLRNSYRFLEE--------TLPRRLSLLLQDCSNLTLLRQGKQVHA 55

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR--DVVSWSTMIRGYHRGGLP 153
           F I N + GD+Y    ++ MY+ CGS  +   +F  + +R   +  W+++I  + R GL 
Sbjct: 56  FVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRLSSIRPWNSIISSFVRMGLL 115

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVS---LFADVADVDLGKAIHACVVRNCKDEKLGVA 210
            +AL    +M    + P       +V       +   ++      + +  +C +      
Sbjct: 116 NQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNE-----F 170

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           +A++LI  Y + G +  A +LF+R+ Q   V W VM++GY +C   +  ++ F+ M  + 
Sbjct: 171 VASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQ 230

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + P+ +T   ++  C     + LG  LH  ++ +G +F  ++ N+L+ MY KC     A 
Sbjct: 231 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAI 290

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            LF  M   D + WN +IS Y Q+  ++++   F  M  S V P+ +T   LL   ++  
Sbjct: 291 KLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFE 350

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
            LE  + +H YI +  + +D+ L +AL+D Y KC  V+ A ++FS+    D+ ++ AM++
Sbjct: 351 NLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMIS 410

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           GY  +G   +AL  F  + +  + PN IT + +L        +  G+      +HG  + 
Sbjct: 411 GYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRE-----LHGFIIK 465

Query: 511 PKIE---HYGC-MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
              +   + GC ++D+  + G ++ A+E+   +  R +++ W +++       NPS
Sbjct: 466 KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKR-DIVSWNSMITRCAQSDNPS 520



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 181/372 (48%), Gaps = 31/372 (8%)

Query: 7   FLNLEQTRQCHAHI---------------IKTHFK----------FSYTNIINPLTRYNS 41
           F NLE  RQ H +I               I  +FK          FS  N ++ +  + +
Sbjct: 349 FENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVV-FTA 407

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           +++ Y+ N     AL ++ ++ K     +  T+ +IL     +L   LG+E+HGF IK G
Sbjct: 408 MISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKG 467

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
            D    +  A+I MY++CG +  A  +F  +  RD+VSW++MI    +   P  A+++ R
Sbjct: 468 FDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFR 527

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
           +M    I    V++ + +S  A++     GKAIH  ++++     L V   + LIDMY+K
Sbjct: 528 QMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKH--SLALDVYSESTLIDMYAK 585

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN-VFPSEITILS 280
           CGNL  A  +F+ + + ++VSW  +I+ Y    ++ + + LF EM+E++   P +IT L 
Sbjct: 586 CGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLE 645

Query: 281 LIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-S 338
           +I  C  VG +  G ++  +     G +        +VD++G+   +  A      M   
Sbjct: 646 IISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFP 705

Query: 339 KDVMIWNAVISA 350
            D  +W  ++ A
Sbjct: 706 PDAGVWGTLLGA 717


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 217/562 (38%), Positives = 325/562 (57%), Gaps = 5/562 (0%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           T   +LK CA       G+ +H      GL  ++  S AL  MY +C     AR +FD M
Sbjct: 18  TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD--IRPSEVAMISMVSLFADVADVDL 190
           P+RD V+W+ ++ GY R GLP  A+E +  M+  +   RP  V ++S++   AD   +  
Sbjct: 78  PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
            + +HA  +R   DE   V ++TA++D Y KCG +  A+ +F+ +   + VSW  MI GY
Sbjct: 138 CREVHAFALRAGLDEL--VNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGY 195

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
                  E + LF  M++E V  ++ ++L+ +  CG +G L   + +H  ++R G   ++
Sbjct: 196 ADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNV 255

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMI-WNAVISAYAQAHCIDKAFELFIHMKV 369
           ++ NAL+  Y KC+    A  +F+ + +K   I WNA+I  + Q  C + A  LF  M++
Sbjct: 256 SVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQL 315

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
             VRP+  T+V ++    +       +W+H Y  +  L+ DV + TAL+DMY+KCG V+ 
Sbjct: 316 ENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSI 375

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A RLF  A  R +  WNAM+ GYG HG G+ A+  F +M+ +G  PN  TF+ +L ACSH
Sbjct: 376 ARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSH 435

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           AGLV EG+  F  M    GL P +EHYG MVDLLGRAG LDEA   IK+MP+ P + V+G
Sbjct: 436 AGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYG 495

Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR 609
           A+L A KLHKN  + E +A  I E+ P+   Y+VL++NIYA A+ W DVA VR  M++  
Sbjct: 496 AMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKG 555

Query: 610 VKKEPGFSSVEVNGLVHKFIRG 631
           ++K PG+S +++   VH F  G
Sbjct: 556 LQKTPGWSIIQLKNEVHTFYSG 577



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 162/315 (51%), Gaps = 5/315 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y  N   + A+ ++  M + G +V + ++   L+AC ++      + +H   +
Sbjct: 188 WNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLV 247

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV-VSWSTMIRGYHRGGLPEEAL 157
           + GL  +  V+NALI  Y++C     A  +F+E+ N+   +SW+ MI G+ +   PE+A 
Sbjct: 248 RVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAE 307

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            +   M+  ++RP    ++S++   AD++D    + IH   +R+  D+   V + TALID
Sbjct: 308 RLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQD--VYVLTALID 365

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYSKCG ++ A++LF+      V++W  MI GY         V LF EM      P+E T
Sbjct: 366 MYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETT 425

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
            LS++  C   G +  G+   A + ++ G E  +     +VD+ G+  ++  A +    M
Sbjct: 426 FLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNM 485

Query: 337 K-SKDVMIWNAVISA 350
                + ++ A++ A
Sbjct: 486 PIEPGISVYGAMLGA 500



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 108/202 (53%), Gaps = 3/202 (1%)

Query: 29  YTNIINPLTR--YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           +  + N  TR  +N+++  + +N  P  A  ++A M+      D+FT+ +++ A A +  
Sbjct: 278 FNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISD 337

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
               + IHG++I++ LD D YV  ALI MYS+CG +  AR LFD   +R V++W+ MI G
Sbjct: 338 PLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHG 397

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           Y   G  + A+E+  EM+     P+E   +S+++  +    VD G+   A + ++   E 
Sbjct: 398 YGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEP 457

Query: 207 LGVAIATALIDMYSKCGNLAYA 228
            G+     ++D+  + G L  A
Sbjct: 458 -GMEHYGTMVDLLGRAGKLDEA 478


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 1047

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 218/593 (36%), Positives = 338/593 (56%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YNSL++   +      AL ++  M  +  + D  T+ ++L AC+ V    +GK+ H +AI
Sbjct: 340 YNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAI 399

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+  D  +  AL+ +Y +C  + +A   F      +VV W+ M+  Y       E+ +
Sbjct: 400 KAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFK 459

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+   I P++    S++   + +  VDLG+ IH  V++     +  V +++ LIDM
Sbjct: 460 IFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKT--GFQFNVYVSSVLIDM 517

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G L +A ++F RL +  VVSWT MI+GY +  +  E + LF EM ++ +    I  
Sbjct: 518 YAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGF 577

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S I  C  +  L  G+ +HA    +G+   L++ NALV +Y +C ++R A   FD + S
Sbjct: 578 ASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFS 637

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN++IS +AQ+   ++A  LF  M  +    N  T    +S       +++GK +
Sbjct: 638 KDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQI 697

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I K G + +  +   L+ +YAKCG+++ A R F E   ++   WNAM+ GY  HG G
Sbjct: 698 HAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHG 757

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            +AL  F DM++ GV PN +TF+G+L+ACSH GLV EG   F  M    GLVPK EHY C
Sbjct: 758 FKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYAC 817

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VDLLGR+GLL  A   ++ MP++P+ +V   LL+A  +HKN  +GE AA+ +LE+EP++
Sbjct: 818 VVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPKD 877

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VL+SN+YAV  +W      R++MK+  VKKEPG S +EVN  VH F  G
Sbjct: 878 SATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIEVNNSVHAFFAG 930



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 144/523 (27%), Positives = 273/523 (52%), Gaps = 5/523 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQ-VLMTHLGK 91
           + PL+ +N ++  ++        L ++  M +   + D  T   +L+ C    +  H  +
Sbjct: 131 VRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVE 190

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           +IH   I +G +   +V N LI +Y + G L SA+ +FD +  RD VSW  M+ G  + G
Sbjct: 191 KIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSG 250

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
             EEA+ +  +M    + P+     S++S    V    +G+ +H  V++  +   L   +
Sbjct: 251 CEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLK--QGFSLETYV 308

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
             AL+ +YS+ GN   A+Q+FN + Q   VS+  +ISG  +    ++ + LF +M  + +
Sbjct: 309 CNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCL 368

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P  +T+ SL+  C  VG L +GK  H+Y ++ G    + +  AL+D+Y KC +I++A  
Sbjct: 369 KPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHE 428

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
            F   ++++V++WN ++ AY     ++++F++F  M++  + PN+ T   +L  C+   A
Sbjct: 429 FFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRA 488

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           +++G+ +HT + K G + +V + + L+DMYAK G ++ A ++F     +D+  W AM+AG
Sbjct: 489 VDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAG 548

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           Y  H    EAL  F +M+  G+  + I F   ++AC+    + +G+ +  +     G   
Sbjct: 549 YAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVS-GYSD 607

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            +     +V L  R G + +A+     +  + N I W +L++ 
Sbjct: 608 DLSVGNALVSLYARCGKVRDAYFAFDKIFSKDN-ISWNSLISG 649



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 153/558 (27%), Positives = 268/558 (48%), Gaps = 28/558 (5%)

Query: 21  IKTHFKFSYTNIINPLTRYNSLVT-----------------SYIKNNKPSSALNIYAFMR 63
           IKT+FK    +I+N + ++  +V+                 +Y  +   ++ +N    M 
Sbjct: 5   IKTYFK----SIVNKIKQFRPVVSIFFFFQKFLEHNTALSYAYSNDEGEANGINFLHLME 60

Query: 64  KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLV 123
           + G   ++ T   +L  C        G ++HG  +K G   +  +   L+ +Y   G L 
Sbjct: 61  ERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLD 120

Query: 124 SARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFA 183
            A  +FDEMP R +  W+ ++  +  G +    L + R M    ++P E     ++    
Sbjct: 121 GAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCG 180

Query: 184 DVADVDLG--KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
              DV     + IHA  + +  +  L V     LID+Y K G L  AK++F+ L +   V
Sbjct: 181 G-GDVPFHCVEKIHARTITHGYENSLFV--CNPLIDLYFKNGFLNSAKKVFDGLQKRDSV 237

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           SW  M+SG  +     E V LF +M    V+P+     S++  C  V   ++G+ LH  +
Sbjct: 238 SWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLV 297

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
           L+ GF     + NALV +Y +      A  +F+ M  +D + +N++IS  +Q    DKA 
Sbjct: 298 LKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKAL 357

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
           ELF  M +  ++P+ VT+  LLS C+  GAL +GK  H+Y  K G+  D+IL+ AL+D+Y
Sbjct: 358 ELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLY 417

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
            KC D+  A+  F      ++ +WN M+  YG+     E+   F  M+  G++PN  T+ 
Sbjct: 418 VKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYP 477

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
            +L  CS    V  G+ +  +++   G    +     ++D+  + G LD A ++ + +  
Sbjct: 478 SILRTCSSLRAVDLGEQIHTQVLK-TGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKE 536

Query: 542 RPNMIVWGALLAASKLHK 559
           + +++ W A++A    H+
Sbjct: 537 K-DVVSWTAMIAGYAQHE 553



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 212/419 (50%), Gaps = 7/419 (1%)

Query: 21  IKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA 80
           IKT  +F  +     +  +N ++ +Y   +  + +  I+  M+  G E + FT P+IL+ 
Sbjct: 423 IKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRT 482

Query: 81  CAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSW 140
           C+ +    LG++IH   +K G   + YVS+ LI MY++ G L  A  +F  +  +DVVSW
Sbjct: 483 CSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSW 542

Query: 141 STMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH--ACV 198
           + MI GY +     EAL + +EM+   I    +   S +S  A +  ++ G+ IH  ACV
Sbjct: 543 TAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACV 602

Query: 199 VRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE 258
                D    +++  AL+ +Y++CG +  A   F+++     +SW  +ISG+ +     E
Sbjct: 603 SGYSDD----LSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEE 658

Query: 259 GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
            + LF++M +     +  T    +     V  ++LGK +HA I++ G +    ++N L+ 
Sbjct: 659 ALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLIT 718

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
           +Y KC  I  A   F  M  K+ + WNA+++ Y+Q     KA  LF  MK   V PN VT
Sbjct: 719 LYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVT 778

Query: 379 MVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
            VG+LS C+  G ++ G K+  +  E  GL         +VD+  + G ++ A R   E
Sbjct: 779 FVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEE 837


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/663 (34%), Positives = 349/663 (52%), Gaps = 53/663 (7%)

Query: 16  CHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIP 75
           C +H +    +F  ++    +  +NSL+ SY  N + +  L+ +  M       DN+T P
Sbjct: 74  CLSHAVSLLRRFPPSDA--GVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFP 131

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
            + KAC ++     G   H  +   G   + +V NAL+ MYS CGSL  AR +FDEMP  
Sbjct: 132 FVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVW 191

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           DVVSW+++I  Y + G P+ ALE+  +M      RP ++ +++++   A V    LGK  
Sbjct: 192 DVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQF 251

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
           H   V +   + + V     L+DMY+K G +  A  +F+ +    VVSW  M++GY +  
Sbjct: 252 HGFAVTSEMIQNMFVG--NCLVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIG 309

Query: 255 EINEGVRLFAEMIEENVF-----------------------------------PSEITIL 279
              + VRLF +M EE +                                    P+E+T++
Sbjct: 310 RFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369

Query: 280 SLIIECGFVGGLQLGKWLHAYILR-------NGFEFSLAMANALVDMYGKCREIRSARTL 332
           S++  C  VG L  GK +H Y ++       NG      + N L+DMY KC+++  AR +
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAM 429

Query: 333 FDGM--KSKDVMIWNAVISAYAQAHCIDKAFELFIHM--KVSKVRPNEVTMVGLLSLCTE 388
           FD +  K +DV+ W  +I  Y+Q    +KA EL   M  +  + RPN  T+   L  C  
Sbjct: 430 FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS 489

Query: 389 AGALEMGKWLHTY-IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
             AL +GK +H Y +  Q   V + +   L+DMYAKCGD+  A  +F   + ++   W +
Sbjct: 490 LAALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTS 549

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           +M GYGMHG GEEAL  F +M R G K +G+T + +L ACSH+G++ +G   F++M    
Sbjct: 550 LMTGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDF 609

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
           G+ P  EHY C+VDLLGRAG L+ A  +I+ MP+ P  +VW ALL+  ++H    +GE A
Sbjct: 610 GVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYA 669

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE-VNGLVH 626
           A +I E+   N G   L+SN+YA A RW DV  +R +M+   +KK PG S VE + G   
Sbjct: 670 AKKITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTT 729

Query: 627 KFI 629
            F+
Sbjct: 730 FFV 732


>gi|357130605|ref|XP_003566938.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 670

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 214/590 (36%), Positives = 347/590 (58%), Gaps = 13/590 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM---THLGKEIHG 95
           +N ++  Y   + P  AL ++  MR++G   DN+T+  + ++ A          G  +H 
Sbjct: 87  WNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFASWKGRATGDAVHA 146

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              + G   D +V + LI  Y    S+  AR +F+EM  RDVVSW+ MI  + + G  + 
Sbjct: 147 LVQRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDVVSWTLMISAFAQCGQWDN 206

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE---KLGVAIA 212
            L  + EM+    +P+++ +IS++S    V  VD G  ++A V     DE   +  V I 
Sbjct: 207 VLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYARV-----DEYGIEADVDIR 261

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            ALI MY KCG ++ A + F  +   +  SW  +I G+++  +  E + +F EM+ + V 
Sbjct: 262 NALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEALTMFEEMLSDGVI 321

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P  IT++S++     +G LQ G++LH YI  +     + + N+L++MY KC ++ +A  +
Sbjct: 322 PDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINMYAKCGDMAAAEII 381

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ M  +D++ W A++  Y +      AF LF  MKV  V  +E+ +V LLS C++ GAL
Sbjct: 382 FENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGAL 441

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           + G+ +H+YI+++ +  D+ L++ALVDMYAKCG ++ A  +FS   ++    WNAM+ G 
Sbjct: 442 DKGREIHSYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGL 501

Query: 453 GMHGCGEEALIFFVDMER-SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
              G G+EA+  F  + +    KP+ IT   +L AC+H G+V EG   F+ M+  LG+VP
Sbjct: 502 ASQGQGKEAVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEGLHYFNLML-TLGIVP 560

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
             EHYGC+VDLLGRAGLLDEA+  I+ MP++PN ++WG+LLAA ++H    +G+I    I
Sbjct: 561 DNEHYGCIVDLLGRAGLLDEAYNFIQKMPIQPNPVIWGSLLAACRVHHRMELGKIIGQHI 620

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
           +++ P + G +VL+SN++A   +W+DV  VR +M   RV+K PG SS++V
Sbjct: 621 IDLAPNDVGAHVLISNLHAEEGQWDDVEQVRGMMGSRRVEKSPGHSSIQV 670



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/492 (29%), Positives = 245/492 (49%), Gaps = 26/492 (5%)

Query: 79  KACAQVLMTHLGK--------EIHGFAIKNGLDGDAYVSNALIQMYSECGS---LVSARY 127
           +AC   L+ HL          E+HG  ++  L  D  V+  L+ + +   S   +  AR 
Sbjct: 15  RACRDSLLAHLDACASRANLAELHGRLVRAHLGSDPCVAGRLVTLLASPVSRHDMPYARK 74

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV---SLFAD 184
           +FD M     + W+ MIRGY+    P +ALE+ R MR   + P    M ++    + FA 
Sbjct: 75  VFDRMAQPTAIVWNCMIRGYNSCHAPMDALELFRAMRRSGVSPDNYTMAAVAQSSAAFAS 134

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
                 G A+HA V      +++G A    + + LI+ Y    ++  A+++F  +++  V
Sbjct: 135 WKGRATGDAVHALV------QRIGFASDLFVMSGLINFYGASKSVEDARKVFEEMHERDV 188

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           VSWT+MIS + +C + +  +R   EM  E   P++ITI+SL+  CG V  +  G W++A 
Sbjct: 189 VSWTLMISAFAQCGQWDNVLRSLDEMQSEGTKPNKITIISLLSACGQVRAVDKGLWVYAR 248

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           +   G E  + + NAL+ MY KC  +  A   F GM  ++   WN +I  + Q     +A
Sbjct: 249 VDEYGIEADVDIRNALIGMYVKCGCMSDAWKTFKGMPIRNTKSWNTLIDGFVQNGKHKEA 308

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
             +F  M    V P+ +T+V +LS   + G L+ G++LH YI+   +  D+IL+ +L++M
Sbjct: 309 LTMFEEMLSDGVIPDVITLVSVLSTYAQLGDLQQGRYLHNYIKDHEIHCDIILQNSLINM 368

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           YAKCGD+  A  +F     RDI  W AM+ GY        A   F DM+   V  + +  
Sbjct: 369 YAKCGDMAAAEIIFENMARRDIVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMAL 428

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
           + LL+ACS  G + +G+ +    +    +   +     +VD+  + G +D A E+   M 
Sbjct: 429 VSLLSACSQLGALDKGREIH-SYIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMR 487

Query: 541 LRPNMIVWGALL 552
            +   + W A++
Sbjct: 488 HK-QTLAWNAMI 498



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 81/157 (51%), Gaps = 1/157 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + ++V  Y+K  +  +A N++  M+          + ++L AC+Q+     G+EIH 
Sbjct: 390 IVSWTAMVCGYVKGLQFRTAFNLFDDMKVRDVMASEMALVSLLSACSQLGALDKGREIHS 449

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +  +  +  D ++ +AL+ MY++CG + +A  +F  M ++  ++W+ MI G    G  +E
Sbjct: 450 YIKEKSVRTDMWLESALVDMYAKCGCIDAAAEIFSRMRHKQTLAWNAMIGGLASQGQGKE 509

Query: 156 ALEVMRE-MRFMDIRPSEVAMISMVSLFADVADVDLG 191
           A+ +  + ++  D +P  + +  ++     V  VD G
Sbjct: 510 AVALFEQLLKLRDPKPDAITLKVVLCACTHVGMVDEG 546


>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
          Length = 825

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/591 (35%), Positives = 341/591 (57%), Gaps = 3/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+  Y ++   +  + ++  + ++G E+  +T+PT+LK C ++ +   G+ +HG  I
Sbjct: 230 WNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVI 289

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+ D  ++N LI+MYS+C S   A  +F  +   DVV  S MI  + R  +  EA +
Sbjct: 290 KRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFD 349

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M  M ++P++   + +  + +   DV+L ++IHA +V++      GV    A++ M
Sbjct: 350 IFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVC--DAIVGM 407

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y K G +  A   F+ +    + SW  ++SG+   N    G+R+F E+I E V  ++ T 
Sbjct: 408 YVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTY 467

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           + ++  C  +  L+ G  +HA +L++GF+    ++  L+DMY +     +AR +FD +K 
Sbjct: 468 VGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKE 527

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +DV  W  V+S YA+    +KA E F  M     RPN+ T+   LS+C++   L  G  L
Sbjct: 528 RDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQL 587

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H+Y  K G    V+  +ALVDMY KCG++  A  LF E+   D+  WN ++ GY  HG G
Sbjct: 588 HSYTIKSGWNSSVV-SSALVDMYVKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHG 646

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            +AL  F +M   G  P+ ITF+G+L+ACSHAGL+ EG+  F  +    G+ P +EHY C
Sbjct: 647 YKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYAC 706

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVD+L +AG L EA  +I  MPL P+  +W  +L A ++H N  + E AA ++ E +P +
Sbjct: 707 MVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQPDD 766

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
               +L+SNIYA   RWNDVA +R ++ +  VKKEPG S +E+NG +H F+
Sbjct: 767 ISSCILLSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWIEINGKLHVFL 817



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 214/439 (48%), Gaps = 4/439 (0%)

Query: 50  NKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVS 109
           + PS +      +R    E+ ++     L+ CA       GK +H   +++G   DA++ 
Sbjct: 41  SAPSPSPRDDERLRLRAEELRSYA--AALQGCAASRALRRGKALHARLLRSGPRPDAFLH 98

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
           ++L+ MY +CG L  AR +FD MP+RDVV+W+ M+      G    AL +  EM    + 
Sbjct: 99  DSLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVV 158

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           P+  A+ + +      +D+     +HA  V+   +      ++++L++ Y  CG +  A+
Sbjct: 159 PNGFALAAALKACTVGSDLGFTPQVHAQAVK--LEGLFDPYVSSSLVEAYVSCGEVDVAE 216

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           +        S VSW  +++ Y R  +  + + +F +++E     S+ T+ +++  C  +G
Sbjct: 217 RALLDSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELG 276

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
             + G+ +H  +++ G E    + N L++MY KC     A  +F  +   DV+  + +IS
Sbjct: 277 LAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMIS 336

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
            + +     +AF++F+ M    V+PN+ T VGL  + +  G + + + +H +I K G   
Sbjct: 337 CFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSR 396

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
              +  A+V MY K G V  A   F      DI  WN +++G+      E  L  F ++ 
Sbjct: 397 TKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELI 456

Query: 470 RSGVKPNGITFIGLLNACS 488
             GV  N  T++G+L  C+
Sbjct: 457 CEGVLANKYTYVGILRCCT 475



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 197/410 (48%), Gaps = 39/410 (9%)

Query: 4   KNGFLNLEQTRQCHAHIIKTHFK-----------------------FSYTNIINP-LTRY 39
           + G +NL   R  HAHI+K+ F                         ++  +  P +  +
Sbjct: 375 RTGDVNL--CRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASW 432

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           N+L++ +   N     L I+  +   G   + +T   IL+ C  ++    G ++H   +K
Sbjct: 433 NTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLK 492

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
           +G  GD  VS  L+ MY + G   +AR +FD +  RDV SW+ ++  Y +    E+A+E 
Sbjct: 493 SGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIEC 552

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
            R M   + RP++  + + +S+ +D+A +  G  +H+  +++  +  +   +++AL+DMY
Sbjct: 553 FRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSSV---VSSALVDMY 609

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            KCGNLA A+ LF+  + + +V W  +I GY +     + +  F EMI+E   P EIT +
Sbjct: 610 VKCGNLADAEMLFDESDTHDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFV 669

Query: 280 SLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK- 337
            ++  C   G L  G ++        G   +L     +VD+  K  ++  A +L + M  
Sbjct: 670 GVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEMPL 729

Query: 338 SKDVMIWNAVISA---YAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
           + D  +W  ++ A   +      ++A E     K+ + +P++++   LLS
Sbjct: 730 TPDASLWKTILGACRMHGNIEIAERAAE-----KLFESQPDDISSCILLS 774



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 159/315 (50%), Gaps = 4/315 (1%)

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           GKA+HA ++R+    +    +  +L++MY KCG LA A+ +F+ +    VV+WT M+S  
Sbjct: 79  GKALHARLLRS--GPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAI 136

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
               +    +RLFAEM EE V P+   + + +  C     L     +HA  ++    F  
Sbjct: 137 TAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDP 196

Query: 311 AMANALVDMYGKCREIRSA-RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
            ++++LV+ Y  C E+  A R L D     DV  WNA+++ YA+     K   +F  +  
Sbjct: 197 YVSSSLVEAYVSCGEVDVAERALLDSPVRSDVS-WNALLNEYARDGDYAKVMLVFDKLVE 255

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
           S    ++ T+  +L  C E G  + G+ +H  + K+GLE D +L   L++MY+KC     
Sbjct: 256 SGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAED 315

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           AY +F+     D+   + M++ +  H    EA   F+ M   GVKPN  TF+GL    S 
Sbjct: 316 AYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASR 375

Query: 490 AGLVTEGKSVFDKMV 504
            G V   +S+   +V
Sbjct: 376 TGDVNLCRSIHAHIV 390



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 161/359 (44%), Gaps = 21/359 (5%)

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
           C     L+ GK LHA +LR+G      + ++L++MY KC  +  AR++FDGM  +DV+ W
Sbjct: 70  CAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVVAW 129

Query: 345 NAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK 404
            A++SA   A     A  LF  M    V PN   +   L  CT    L     +H    K
Sbjct: 130 TAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVK 189

Query: 405 QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIF 464
                D  + ++LV+ Y  CG+V+ A R   ++  R    WNA++  Y   G   + ++ 
Sbjct: 190 LEGLFDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAKVMLV 249

Query: 465 FVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLVPKIEHYGCMV 520
           F  +  SG + +  T   +L  C   GL   G++     VHGL    GL        C++
Sbjct: 250 FDKLVESGDEISKYTLPTVLKCCMELGLAKSGQA-----VHGLVIKRGLETDRVLNNCLI 304

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK-NPSMGEI-AATQILEIEPQN 578
           ++  +    ++A+E+   +   P+++    +++    H   P   +I      + ++P  
Sbjct: 305 EMYSKCLSAEDAYEVFARID-EPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQ 363

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE--VNGLVHKFIRGGMVN 635
           Y +      +  VA+R  DV   R +   I VK   GFS  +   + +V  +++ G V 
Sbjct: 364 YTF----VGLAIVASRTGDVNLCRSIHAHI-VKS--GFSRTKGVCDAIVGMYVKTGAVQ 415


>gi|218191314|gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
          Length = 667

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 230/595 (38%), Positives = 335/595 (56%), Gaps = 15/595 (2%)

Query: 35  PLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           P++  NSL+ SY        AL +Y+ MR      D+ T P   KACA + +   G+ +H
Sbjct: 76  PVSFSNSLLRSYTGLGCHREALAVYSAMRA----FDHLTFPFAAKACAGLRLGRHGRAVH 131

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
             A+  G  GD YV NALI MY  CG + +A  +F  M NR VVSW+ +I G  + G  E
Sbjct: 132 CRALAAGFGGDTYVQNALISMYMSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAE 191

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--VAIA 212
            ALEV  EM    +      ++S++   A   D++ G+A+H    R  +D+ LG  VA+ 
Sbjct: 192 RALEVFGEMAADGVGIDRATVVSVLPACAQAKDLNTGRAVH----RLVEDKGLGDYVAVK 247

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQN-SVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
            ALIDMY KC +L  A+++F+    +  VVSWT MI  Y+  +   E + L  +M+    
Sbjct: 248 NALIDMYGKCRSLEDARRVFDHCKHDKDVVSWTAMIGAYVLNDRAFEAISLGCQMLMSGA 307

Query: 272 -FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
            +P+ +T++ L+  C  +   +  K  HA  +R G +  +A+  AL+D Y +C +++  R
Sbjct: 308 AWPNGVTMVYLLSACASMPSGKHAKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMR 367

Query: 331 -TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
            TL  G  S     WNA +S Y  +    KA ELF  M    VRP+  TM  +L    E+
Sbjct: 368 LTLERG--SWRAETWNAALSGYTVSGREKKAIELFKRMIAESVRPDSATMASILPAYAES 425

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
             L+ GK +H ++   G      + T L+D+Y+K GD++ A+ LF     +D+  W  ++
Sbjct: 426 ADLKEGKNIHCFLLTLGFLRSTEIATGLIDVYSKAGDLDAAWALFQWLPEKDVVAWTTII 485

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           AGY +HG    A++ +  M  SG KPN +T   LL ACSHAG++ EG  VF  M +  GL
Sbjct: 486 AGYSIHGHARTAILLYDRMVESGGKPNTVTIATLLYACSHAGMIDEGIKVFKDMRNVHGL 545

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
           +P  EHY C+VD+LGRAG ++EAH +I+ MP  P+  VWGALL A  LHKN   GE+AA 
Sbjct: 546 MPNGEHYSCLVDMLGRAGRIEEAHRLIQDMPFEPSTSVWGALLGACVLHKNVEFGEVAAK 605

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
           ++ +++P+N G  VL+ NIYA A+RW DV  VRR+M E  + KEPG S VE   +
Sbjct: 606 RLFQLDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEARSV 660



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/464 (30%), Positives = 225/464 (48%), Gaps = 36/464 (7%)

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWS-TMIRGYHRGGLPEEALEVMREMRFMDI 168
           + L  +Y  CG   SA  L  +MP    VS+S +++R Y   G   EAL V   MR  D 
Sbjct: 49  HPLFMVYCACGRPSSAHNLLAQMPQPPPVSFSNSLLRSYTGLGCHREALAVYSAMRAFD- 107

Query: 169 RPSEVAMISMVSLFADVADVDL-----GKAIHACVVRNCKDEKLGVA----IATALIDMY 219
                    +   FA  A   L     G+A+H      C+    G      +  ALI MY
Sbjct: 108 --------HLTFPFAAKACAGLRLGRHGRAVH------CRALAAGFGGDTYVQNALISMY 153

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
             CG++  A+ +F  +   +VVSW  +I+G ++       + +F EM  + V     T++
Sbjct: 154 MSCGDVGAAEAVFGAMRNRTVVSWNAVIAGCVKNGYAERALEVFGEMAADGVGIDRATVV 213

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-S 338
           S++  C     L  G+ +H  +   G    +A+ NAL+DMYGKCR +  AR +FD  K  
Sbjct: 214 SVLPACAQAKDLNTGRAVHRLVEDKGLGDYVAVKNALIDMYGKCRSLEDARRVFDHCKHD 273

Query: 339 KDVMIWNAVISAYAQAHCIDKAFE---LFIHMKVSKVR-PNEVTMVGLLSLCTEAGALEM 394
           KDV+ W A+I AY      D+AFE   L   M +S    PN VTMV LLS C    + + 
Sbjct: 274 KDVVSWTAMIGAYVLN---DRAFEAISLGCQMLMSGAAWPNGVTMVYLLSACASMPSGKH 330

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
            K  H    + GL+ D+ ++TAL+D YA+CG +           +R    WNA ++GY +
Sbjct: 331 AKCTHALCIRLGLKSDIAVETALIDAYARCGKMKLMRLTLERGSWRAE-TWNAALSGYTV 389

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
            G  ++A+  F  M    V+P+  T   +L A + +  + EGK++   ++  LG +   E
Sbjct: 390 SGREKKAIELFKRMIAESVRPDSATMASILPAYAESADLKEGKNIHCFLL-TLGFLRSTE 448

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
               ++D+  +AG LD A  + + +P + +++ W  ++A   +H
Sbjct: 449 IATGLIDVYSKAGDLDAAWALFQWLPEK-DVVAWTTIIAGYSIH 491


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/605 (35%), Positives = 350/605 (57%), Gaps = 14/605 (2%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           N+++  Y+++ +    L ++  MR    EVD+ +    LKACA  L   +G EI   A++
Sbjct: 99  NAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVE 158

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
            G++ + +V +++I    + G +  A+ +FD MPN+DVV W+++I GY + G  + A ++
Sbjct: 159 KGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQL 218

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATAL 215
             EM    I+PS + M S++     + ++ LGK +H  V+       LG+     + T+ 
Sbjct: 219 FFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVL------GLGLGNDILVLTSF 272

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMYSK G++  A+ +F ++   ++VSW  MISG +R   + E   LF  ++  +     
Sbjct: 273 VDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDL 332

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            TI+SL+  C     L  GK LH   +R+ FE +L ++ A+VD+Y KC  ++ A  +F+ 
Sbjct: 333 TTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNR 391

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           MK ++V+ W A++   AQ    + A  LF  M+   +  N VT V L+  C   G+L+ G
Sbjct: 392 MKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRG 451

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGM 454
           + +H ++ + G   D++  TALVDMYAKCG +N A R+FS  +I +D+ +WN+M+ GYGM
Sbjct: 452 RSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGM 511

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           HG G +A+  +  M   G+KPN  TF+ LL+ACSH+ LV +G S+F+ M     + P  +
Sbjct: 512 HGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEK 571

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HY C+VDLL RAG  +EA  +I+ MP +P   V  ALL+  + HKN ++G   + ++L +
Sbjct: 572 HYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLAL 631

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG--G 632
           +  N G  +++SNIYA A RW+ V  +R +M+   +KK PG+S VE    VH F  G   
Sbjct: 632 DAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGNWVHTFFAGDNS 691

Query: 633 MVNWK 637
             NW+
Sbjct: 692 HPNWE 696



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/468 (29%), Positives = 244/468 (52%), Gaps = 4/468 (0%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           K  H   I N L  D +V+  L++ YS+  SL +ARY+FD+      +  + M+ GY + 
Sbjct: 49  KSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQPKGLLCNAMLCGYLQS 108

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           G   E LE+   MR  ++     +    +   A   D ++G  I +  V   K  +    
Sbjct: 109 GRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVE--KGMEKNRF 166

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           + +++I    K G +  A+++F+ +    VV W  +I GY++    +   +LF EM    
Sbjct: 167 VGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSG 226

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + PS IT+ SLI  CG +G L+LGK +H Y+L  G    + +  + VDMY K  +I SAR
Sbjct: 227 IKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESAR 286

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +F  M +++++ WNA+IS   +   + ++F+LF  +  S    +  T+V LL  C++  
Sbjct: 287 WVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTA 346

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           +L  GK LH     +  E ++IL TA+VD+Y+KCG +  A  +F+    R++  W AM+ 
Sbjct: 347 SLATGKILHG-CAIRSFESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLV 405

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           G   +G  E+AL  F  M+  G+  N +TF+ L+++C+H G +  G+S+   +   LG  
Sbjct: 406 GLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFR-LGFA 464

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             I +   +VD+  + G ++ A  +     +  ++++W +++    +H
Sbjct: 465 FDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMH 512



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 231/425 (54%), Gaps = 16/425 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++  Y++      A  ++  M  +G +    T+ ++++AC  +    LGK +HG+ +
Sbjct: 199 WNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVL 258

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             GL  D  V  + + MYS+ G + SAR++F +MP R++VSW+ MI G  R GL  E+ +
Sbjct: 259 GLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFD 318

Query: 159 VMREMRFMDIRPSE----VAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           +   +    +R S       ++S++   +  A +  GK +H C +R+ +     + ++TA
Sbjct: 319 LFHRL----VRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSFESN---LILSTA 371

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           ++D+YSKCG+L  A  +FNR+   +V++WT M+ G  +     + +RLFA+M EE +  +
Sbjct: 372 IVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAAN 431

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            +T +SL+  C  +G L+ G+ +H ++ R GF F +    ALVDMY KC +I  A  +F 
Sbjct: 432 SVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFS 491

Query: 335 -GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
            G  SKDV++WN++I+ Y       +A  ++  M    ++PN+ T + LLS C+ +  +E
Sbjct: 492 HGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVE 551

Query: 394 MGKWLHTYIEKQGLEVDVILK--TALVDMYAKCGDVNGAYRLFSEAIYRD-ICMWNAMMA 450
            G  L   +E+    +  I K    LVD+ ++ G    A  L  +  ++    +  A+++
Sbjct: 552 QGISLFNSMERDH-NIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLS 610

Query: 451 GYGMH 455
           G   H
Sbjct: 611 GCRTH 615



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/255 (30%), Positives = 144/255 (56%), Gaps = 12/255 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N++++  ++N     + +++  + ++    D  TI ++L+ C+Q      GK +HG
Sbjct: 297 LVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHG 356

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            AI++  + +  +S A++ +YS+CGSL  A ++F+ M +R+V++W+ M+ G  + G  E+
Sbjct: 357 CAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAED 415

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI---- 211
           AL +  +M+   I  + V  +S+V   A +  +  G++IH  + R      LG A     
Sbjct: 416 ALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFR------LGFAFDIVN 469

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
            TAL+DMY+KCG +  A+++F+  +    VV W  MI+GY       + V ++ +MIEE 
Sbjct: 470 MTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGYQAVGIYHKMIEEG 529

Query: 271 VFPSEITILSLIIEC 285
           + P++ T LSL+  C
Sbjct: 530 LKPNQTTFLSLLSAC 544


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 214/606 (35%), Positives = 349/606 (57%), Gaps = 5/606 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L+R N L+  + +N++   ALN++  +R++GS  D  ++  +LK C  +    +GK++H 
Sbjct: 57  LSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHC 116

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             IK G   D  V  +L+ MY +  S+     +FDEM  ++VVSW++++ GY + GL E+
Sbjct: 117 QCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQ 176

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL++  +M+   I+P+     +++   A    V+ G  +H  V+++  D    + +  ++
Sbjct: 177 ALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST--IFVGNSM 234

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           ++MYSK   ++ AK +F+ +   + VSW  MI+G++      E   LF  M  E V  ++
Sbjct: 235 VNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQ 294

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
               ++I  C  +  +   K LH  +++NG +F L +  AL+  Y KC EI  A  LF  
Sbjct: 295 TIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCM 354

Query: 336 MKS-KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGA-L 392
           M   ++V+ W A+IS Y Q    D+A  LF  M+  + V PNE T   +L+ C    A +
Sbjct: 355 MHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASV 414

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           E GK  H+   K G    + + +ALV MYAK G++  A  +F   + RD+  WN+M++GY
Sbjct: 415 EQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGY 474

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             HGCG+++L  F +M    ++ +GITFIG+++AC+HAGLV EG+  FD MV    +VP 
Sbjct: 475 AQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPT 534

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           +EHY CMVDL  RAG+L++A ++I  MP      +W  LLAA ++H N  +GE+AA +++
Sbjct: 535 MEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLI 594

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
            ++PQ+    VL+SNIYA A  W + A VR++M   +VKKE G+S +EV      F+ G 
Sbjct: 595 SLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGD 654

Query: 633 MVNWKS 638
           + + +S
Sbjct: 655 LSHPQS 660



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 231/429 (53%), Gaps = 9/429 (2%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  + SL+  Y +N     AL +++ M+  G + + FT   +L   A       G +
Sbjct: 155 VKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQ 214

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H   IK+GLD   +V N+++ MYS+   +  A+ +FD M NR+ VSW++MI G+   GL
Sbjct: 215 VHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGL 274

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
             EA E+   MR   ++ ++    +++ L A++ ++   K +H  V++N  D  L   I 
Sbjct: 275 DLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLN--IK 332

Query: 213 TALIDMYSKCGNLAYAKQLFNRLN--QNSVVSWTVMISGYIRCNEINEGVRLFAEM-IEE 269
           TAL+  YSKC  +  A +LF  ++  QN VVSWT +ISGY++    +  + LF +M  EE
Sbjct: 333 TALMVAYSKCSEIDDAFKLFCMMHGVQN-VVSWTAIISGYVQNGRTDRAMNLFCQMRREE 391

Query: 270 NVFPSEITILSLIIECGF-VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
            V P+E T  S++  C      ++ GK  H+  +++GF  +L +++ALV MY K   I S
Sbjct: 392 GVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIES 451

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           A  +F     +D++ WN++IS YAQ  C  K+ ++F  M+   +  + +T +G++S CT 
Sbjct: 452 ANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTH 511

Query: 389 AGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY-RDICMWN 446
           AG +  G ++    ++   +   +   + +VD+Y++ G +  A  L ++  +     +W 
Sbjct: 512 AGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWR 571

Query: 447 AMMAGYGMH 455
            ++A   +H
Sbjct: 572 TLLAACRVH 580



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/441 (25%), Positives = 230/441 (52%), Gaps = 15/441 (3%)

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           ++ LFDE P + +   + ++  + R    +EAL +   +R         ++  ++ +   
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 185 VADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
           + D  +GK +H      C+  K G    V++ T+L+DMY K  ++   +++F+ +   +V
Sbjct: 105 LFDRIVGKQVH------CQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNV 158

Query: 241 VSWTVMISGYIRCNEINE-GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
           VSWT +++GY R N +NE  ++LF++M  E + P+  T  +++      G ++ G  +H 
Sbjct: 159 VSWTSLLAGY-RQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHT 217

Query: 300 YILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
            ++++G + ++ + N++V+MY K   +  A+ +FD M++++ + WN++I+ +       +
Sbjct: 218 MVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLE 277

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVD 419
           AFELF  M++  V+  +     ++ LC     +   K LH  + K G + D+ +KTAL+ 
Sbjct: 278 AFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMV 337

Query: 420 MYAKCGDVNGAYRLFSEAI-YRDICMWNAMMAGYGMHGCGEEALIFFVDMER-SGVKPNG 477
            Y+KC +++ A++LF      +++  W A+++GY  +G  + A+  F  M R  GV+PN 
Sbjct: 338 AYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNE 397

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK 537
            TF  +LNAC+      E    F       G    +     +V +  + G ++ A+E+ K
Sbjct: 398 FTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFK 457

Query: 538 SMPLRPNMIVWGALLAASKLH 558
               R +++ W ++++    H
Sbjct: 458 RQVDR-DLVSWNSMISGYAQH 477


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 216/609 (35%), Positives = 350/609 (57%), Gaps = 10/609 (1%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  + SL+  Y +N     AL +++ M+  G + + FT   +L   A       G +
Sbjct: 155 VKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQ 214

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H   IK+GLD   +V N+++ MYS+   +  A+ +FD M NR+ VSW++MI G+   GL
Sbjct: 215 VHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGL 274

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
             EA E+   MR   ++ ++    +++ L A++ ++   K +H  V++N  D  L   I 
Sbjct: 275 DLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLN--IK 332

Query: 213 TALIDMYSKCGNLAYAKQLFNRLN--QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           TAL+  YSKC  +  A +LF  ++  QN VVSWT +ISGY++    +  + LF +M  E 
Sbjct: 333 TALMVAYSKCSEIDDAFKLFCMMHGVQN-VVSWTAIISGYVQNGRTDRAMNLFCQMRREG 391

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           V P+  T  +++     V   Q+    HA +++  +E S ++  AL D Y K  +   A 
Sbjct: 392 VRPNHFTYSTILTANAAVSPSQI----HALVVKTNYENSPSVGTALSDSYSKIGDANEAA 447

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +F+ +  KD++ W+A++S YAQ   I+ A ++F+ +    V PNE T   +L+ C    
Sbjct: 448 KIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPT 507

Query: 391 A-LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           A +E GK  H+   K G    + + +ALV MYAK G++  A  +F   + RD+  WN+M+
Sbjct: 508 ASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMI 567

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           +GY  HGCG+++L  F +M    ++ +GITFIG+++AC+HAGLV EG+  FD MV    +
Sbjct: 568 SGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHI 627

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
           VP +EHY CMVDL  RAG+L++A ++I  MP      +W  LLAA ++H N  +GE+AA 
Sbjct: 628 VPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAE 687

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +++ ++PQ+    VL+SNIYA A  W + A VR++M   +VKKE G+S +EV      F+
Sbjct: 688 KLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFM 747

Query: 630 RGGMVNWKS 638
            G + + +S
Sbjct: 748 AGDLSHPQS 756



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 156/524 (29%), Positives = 268/524 (51%), Gaps = 8/524 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L+R N L+  + +N++   ALN++  +R++GS  D  ++  +LK C  +    +GK++H 
Sbjct: 57  LSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHC 116

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             IK G   D  V  +L+ MY +  S+     +FDEM  ++VVSW++++ GY + GL E+
Sbjct: 117 QCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQ 176

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL++  +M+   I+P+     +++   A    V+ G  +H  V+++  D    + +  ++
Sbjct: 177 ALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST--IFVGNSM 234

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           ++MYSK   ++ AK +F+ +   + VSW  MI+G++      E   LF  M  E V  ++
Sbjct: 235 VNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQ 294

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
               ++I  C  +  +   K LH  +++NG +F L +  AL+  Y KC EI  A  LF  
Sbjct: 295 TIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCM 354

Query: 336 MKS-KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
           M   ++V+ W A+IS Y Q    D+A  LF  M+   VRPN  T   +L+    A A   
Sbjct: 355 MHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILT----ANAAVS 410

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
              +H  + K   E    + TAL D Y+K GD N A ++F     +DI  W+AM++GY  
Sbjct: 411 PSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLSGYAQ 470

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
            G  E A+  F+ + + GV+PN  TF  +LNAC+      E    F       G    + 
Sbjct: 471 MGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALC 530

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
               +V +  + G ++ A+E+ K    R +++ W ++++    H
Sbjct: 531 VSSALVTMYAKRGNIESANEVFKRQVDR-DLVSWNSMISGYAQH 573



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 245/479 (51%), Gaps = 39/479 (8%)

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           ++ LFDE P + +   + ++  + R    +EAL +   +R         ++  ++ +   
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 185 VADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
           + D  +GK +H      C+  K G    V++ T+L+DMY K  ++   +++F+ +   +V
Sbjct: 105 LFDRIVGKQVH------CQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNV 158

Query: 241 VSWTVMISGYIRCNEINE-GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
           VSWT +++GY R N +NE  ++LF++M  E + P+  T  +++      G ++ G  +H 
Sbjct: 159 VSWTSLLAGY-RQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHT 217

Query: 300 YILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
            ++++G + ++ + N++V+MY K   +  A+ +FD M++++ + WN++I+ +       +
Sbjct: 218 MVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLE 277

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVD 419
           AFELF  M++  V+  +     ++ LC     +   K LH  + K G + D+ +KTAL+ 
Sbjct: 278 AFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMV 337

Query: 420 MYAKCGDVNGAYRLFSEAI-YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
            Y+KC +++ A++LF      +++  W A+++GY  +G  + A+  F  M R GV+PN  
Sbjct: 338 AYSKCSEIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHF 397

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHE 534
           T+  +L A           +V    +H L +    E+       + D   + G  +EA +
Sbjct: 398 TYSTILTA---------NAAVSPSQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAK 448

Query: 535 MIKSMPLRPNMIVWGALLAASKLHKNPSMGEI-AATQIL------EIEPQNYGYNVLMS 586
           + + +  + +++ W A+L+         MG+I  A +I        +EP  + ++ +++
Sbjct: 449 IFELIDEK-DIVAWSAMLSGY-----AQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLN 501


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/586 (35%), Positives = 342/586 (58%), Gaps = 6/586 (1%)

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
           Y K      A +++  MR  G +   FT+ ++L+ C+ + +   G+ IHGF +KNG +G+
Sbjct: 137 YCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGN 196

Query: 106 AYVSNALIQMYSECGSLVSARYLFD--EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
            +V   L+ MY++C  +  A +LF   E   ++ V W+ M+ GY + G   +A+E  R M
Sbjct: 197 VFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYM 256

Query: 164 RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCG 223
               +  ++    ++++  + V     G+ +H  +V++       V + +AL+DMY+KCG
Sbjct: 257 HAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGS--NVYVQSALVDMYAKCG 314

Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLII 283
           +L  AK +   +  + VVSW  ++ G++R     E +RLF  M   N+   + T  S ++
Sbjct: 315 DLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPS-VL 373

Query: 284 ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
            C  VG +   K +H  I++ GFE    ++NALVDMY K  ++  A T+F+ M  KDV+ 
Sbjct: 374 NCCVVGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVIS 432

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           W ++++ YAQ +  +++ ++F  M+V+ V P++  +  +LS C E   LE GK +H    
Sbjct: 433 WTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFI 492

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
           K GL     +  +LV MYAKCG ++ A  +F     +D+  W A++ GY  +G G  +L 
Sbjct: 493 KSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLK 552

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL 523
           F+  M  SG +P+ ITFIGLL ACSHAGLV EG+  F +M    G+ P  EHY CM+DL 
Sbjct: 553 FYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLF 612

Query: 524 GRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNV 583
           GR+G LDEA +++  M ++P+  VW +LL+A ++H+N  + E AAT + E+EP N    V
Sbjct: 613 GRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYV 672

Query: 584 LMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           ++SN+Y+ + +WNDVA +R++MK   + KEPG S +E+N  V+ FI
Sbjct: 673 MLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTFI 718



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 250/480 (52%), Gaps = 41/480 (8%)

Query: 107 YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIR--------------------- 145
           Y +N L+   S+ G +  AR LFD+MP +D  SW+TMI                      
Sbjct: 66  YQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCK 125

Query: 146 ----------GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
                     GY + G   EA ++ R MR    + S+  + S++ + + +  +  G+ IH
Sbjct: 126 SSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIH 185

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL--NQNSVVSWTVMISGYIRC 253
             VV+N  +    V + T L+DMY+KC  ++ A+ LF  L  ++ + V WT M++GY + 
Sbjct: 186 GFVVKNGFEG--NVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQN 243

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
            +  + V  F  M  + V  ++ T  +++  C  V     G+ +H +I+++GF  ++ + 
Sbjct: 244 GDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQ 303

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           +ALVDMY KC ++++A+ + + M+  DV+ WN+++  + +    ++A  LF +M    ++
Sbjct: 304 SALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMK 363

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
            ++ T   +L+ C   G++   K +H  I K G E   ++  ALVDMYAK GD++ AY +
Sbjct: 364 IDDYTFPSVLNCCV-VGSIN-PKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTV 421

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F + + +D+  W +++ GY  +   EE+L  F DM  +GV P+      +L+AC+   L+
Sbjct: 422 FEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLL 481

Query: 494 TEGKSV-FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
             GK V  D +  GL     +  Y  +V +  + G LD+A  +  SM ++ ++I W A++
Sbjct: 482 EFGKQVHLDFIKSGLRWSQSV--YNSLVAMYAKCGCLDDADAIFVSMQVK-DVITWTAII 538



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 133/287 (46%), Gaps = 43/287 (14%)

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY----------------- 351
           S+   N L++   K  ++  AR LFD M  KD   WN +IS+Y                 
Sbjct: 64  SIYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCS 123

Query: 352 --------------AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
                          +  C  +AF+LF  M++   + ++ T+  +L +C+  G ++ G+ 
Sbjct: 124 CKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEM 183

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS--EAIYRDICMWNAMMAGYGMH 455
           +H ++ K G E +V + T LVDMYAKC  V+ A  LF   E   ++  +W AM+ GY  +
Sbjct: 184 IHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQN 243

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLVP 511
           G G +A+ FF  M   GV+ N  TF  +L ACS     +     F + VHG     G   
Sbjct: 244 GDGYKAVEFFRYMHAQGVECNQYTFPTILTACS-----SVLARCFGEQVHGFIVKSGFGS 298

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            +     +VD+  + G L  A  M+++M    +++ W +L+     H
Sbjct: 299 NVYVQSALVDMYAKCGDLKNAKNMLETME-DDDVVSWNSLMVGFVRH 344



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 13/147 (8%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  + +++  Y +N K  ++L  Y  M  +G+  D  T   +L AC+   +   G++
Sbjct: 528 VKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRK 587

Query: 93  IHG-----FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR-DVVSWSTMI-- 144
                   + IK G +  A     +I ++   G L  A+ L D+M  + D   W +++  
Sbjct: 588 YFQQMNKVYGIKPGPEHYA----CMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSA 643

Query: 145 -RGYHRGGLPEEALEVMREMRFMDIRP 170
            R +    L E A   + E+  M+  P
Sbjct: 644 CRVHENLELAERAATNLFELEPMNAMP 670


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 208/599 (34%), Positives = 355/599 (59%), Gaps = 4/599 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +NSL++ Y  N   + AL IY   R  G   D++T+ ++L+AC  +     G  
Sbjct: 178 LRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDI 237

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IHG   K G+  D  V+N L+ MY +   L+  R +FD+M  RD VSW+TMI GY + GL
Sbjct: 238 IHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGL 297

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            EE++++  EM     +P  + + S++     + D++ GK +H  ++ +    +     +
Sbjct: 298 YEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITS--GYECDTTAS 354

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
             LI+MY+KCGNL  ++++F+ +     VSW  MI+ YI+    +E ++LF +M++ +V 
Sbjct: 355 NILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVK 413

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P  +T + L+     +G L LGK LH  + + GF  ++ ++N LVDMY KC E+  +  +
Sbjct: 414 PDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKV 473

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ MK++D++ WN +I++   +   +    +   M+   V P+  TM+ +L +C+   A 
Sbjct: 474 FENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAK 533

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
             GK +H  I K GLE DV +   L++MY+KCG +  ++++F     +D+  W A+++  
Sbjct: 534 RQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISAC 593

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
           GM+G G++A+  F +ME +G+ P+ + F+ ++ ACSH+GLV EG + F +M     + P+
Sbjct: 594 GMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPR 653

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           IEHY C+VDLL R+ LLD+A + I SMPL+P+  +WGALL+A ++  +  + E  + +I+
Sbjct: 654 IEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERII 713

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           E+ P + GY VL+SNIYA   +W+ V  +R+ +K   +KK+PG S +E+   V+ F  G
Sbjct: 714 ELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTG 772



 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 174/549 (31%), Positives = 290/549 (52%), Gaps = 17/549 (3%)

Query: 17  HAHIIKTHFKFSYTNIINP---LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT 73
           +AH       FS   + +P   +  +NS++ +   N   S AL++Y+  ++   + D +T
Sbjct: 58  YAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYT 117

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
            P+++ ACA +L   + K IH   +  G   D Y+ NALI MY     L  AR +F+EMP
Sbjct: 118 FPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP 177

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
            RDVVSW+++I GY+  G   EALE+    R + + P    M S++     +  V+ G  
Sbjct: 178 LRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDI 237

Query: 194 IHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
           IH  +      EK+G    V +   L+ MY K   L   +++F+++     VSW  MI G
Sbjct: 238 IHGLI------EKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICG 291

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
           Y +     E ++LF EM+ +   P  +TI S++  CG +G L+ GK++H Y++ +G+E  
Sbjct: 292 YSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECD 350

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
              +N L++MY KC  + +++ +F GMK KD + WN++I+ Y Q    D+A +LF  MK 
Sbjct: 351 TTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK- 409

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
           + V+P+ VT V LLS+ T+ G L +GK LH  + K G   ++++   LVDMYAKCG++  
Sbjct: 410 TDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGD 469

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           + ++F     RDI  WN ++A           L     M   GV P+  T + +L  CS 
Sbjct: 470 SLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSL 529

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
                +GK +    +  LGL   +     ++++  + G L  + ++ K M  + +++ W 
Sbjct: 530 LAAKRQGKEIHG-CIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWT 587

Query: 550 ALLAASKLH 558
           AL++A  ++
Sbjct: 588 ALISACGMY 596



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 171/353 (48%), Gaps = 8/353 (2%)

Query: 237 QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
            N+V  W  +I         +E + L++E     + P   T  S+I  C  +   ++ K 
Sbjct: 77  SNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKS 136

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           +H  +L  GF   L + NAL+DMY +  ++  AR +F+ M  +DV+ WN++IS Y     
Sbjct: 137 IHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGY 196

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
            ++A E++   +   V P+  TM  +L  C   G++E G  +H  IEK G++ DVI+   
Sbjct: 197 WNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNG 256

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           L+ MY K   +    R+F + + RD   WN M+ GY   G  EE++  F++M     KP+
Sbjct: 257 LLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPD 315

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
            +T   +L AC H G +  GK V D M+   G          ++++  + G L  + E+ 
Sbjct: 316 LLTITSILQACGHLGDLEFGKYVHDYMITS-GYECDTTASNILINMYAKCGNLLASQEVF 374

Query: 537 KSMPLRPNMIVWGALLAASKLHKNPSMGE---IAATQILEIEPQNYGYNVLMS 586
             M  + + + W +++      +N S  E   +      +++P +  Y +L+S
Sbjct: 375 SGMKCKDS-VSWNSMINV--YIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLS 424


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 214/599 (35%), Positives = 351/599 (58%), Gaps = 6/599 (1%)

Query: 36   LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
            L  +N+++  Y +N   S  + +++ MR  G   D FT  +IL ACA +    +G+++H 
Sbjct: 415  LVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHS 474

Query: 96   FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            F IK+  + + +V N L+ MY++CG+L  AR  F+ + NRD VSW+ +I GY +    +E
Sbjct: 475  FIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDE 534

Query: 156  ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            A  + R M    I P EV++ S++S  A++  ++ G+ +H  +V++    +  +   ++L
Sbjct: 535  AFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKS--GLQTCLYAGSSL 592

Query: 216  IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
            IDMY KCG +  A+ +F+ +   SVVS   +I+GY + N++ E + LF EM  E + PSE
Sbjct: 593  IDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQ-NDLVEAIDLFQEMQNEGLNPSE 651

Query: 276  ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA-MANALVDMYGKCREIRSARTLFD 334
            IT  SL+  C     L LG+ +H  I + G  +    +  +L+ MY   +    A  LF 
Sbjct: 652  ITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFS 711

Query: 335  GMK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
              +  K  ++W A+IS + Q  C ++A +L+  M  +  RP++ T   +L  C+   +L 
Sbjct: 712  EFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLG 771

Query: 394  MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGY 452
             G+ +H+ I   GL+ D +  +A+VDMYAKCGD+  + ++F E     D+  WN+M+ G+
Sbjct: 772  DGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGF 831

Query: 453  GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
              +G  E AL  F +M+ + ++P+ +TF+G+L ACSHAG V+EG+ +FD MVH   +VP+
Sbjct: 832  AKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPR 891

Query: 513  IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
            ++H  CM+DLLGR G L EA E I  +   PN ++W  LL A ++H +   G  AA +++
Sbjct: 892  LDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLI 951

Query: 573  EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            E+EP+N    VL+SNIYA +  W++V  VRR M+E  ++K PG S + V    + F+ G
Sbjct: 952  ELEPENSSPYVLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAG 1010



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 159/530 (30%), Positives = 273/530 (51%), Gaps = 75/530 (14%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++ Y +       +  +  ++  G   + FT   +L +CA+++   LGK++H   I
Sbjct: 150 WNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVI 209

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G + +++   +LI MYS+CGSLV AR +FD + + D VSW+ MI GY + GLPEEAL+
Sbjct: 210 KMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALK 269

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC--------------------- 197
           V  +M+ + + P +VA +++++     A V LG+   AC                     
Sbjct: 270 VFEDMQKLGLVPDQVAFVTVIT-----ACVGLGRLDDACDLFVQMPNTNVVAWNVMISGH 324

Query: 198 VVRNCKDE---------KLGV--------AIATALIDMYS-KCGNLAYAKQLFNRLNQN- 238
           V R C  E         K GV        ++ +A+  + +   G L +A+ +   LN N 
Sbjct: 325 VKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNV 384

Query: 239 -----------------------------SVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
                                        ++V W  M+ GY +    ++ ++LF+EM   
Sbjct: 385 YVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGC 444

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
             +P E T  S++  C  +  L++G+ LH++I+++ FE++L + N LVDMY KC  +  A
Sbjct: 445 GFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEA 504

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           R  F+ ++++D + WNA+I  Y Q    D+AF +F  M +  + P+EV++  +LS C   
Sbjct: 505 RQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANL 564

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            ALE G+ +H ++ K GL+  +   ++L+DMY KCG +  A  +FS    R +   NA++
Sbjct: 565 QALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAII 624

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           AGY  +    EA+  F +M+  G+ P+ ITF  LL+AC+    +  G+ +
Sbjct: 625 AGYAQNDL-VEAIDLFQEMQNEGLNPSEITFASLLDACTGPYKLNLGRQI 673



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 232/471 (49%), Gaps = 49/471 (10%)

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
           +   K IH   +K G      + +A++ +Y++CG++  A   F+++  RD+++W++++  
Sbjct: 97  SRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSM 156

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           Y R G  E+ +     ++   + P++     ++S  A + D+DLGK +H  V+      K
Sbjct: 157 YSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVI------K 210

Query: 207 LGVAIAT----ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
           +G    +    +LIDMYSKCG+L  A+++F+ +     VSWT MI+GY++     E +++
Sbjct: 211 MGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKV 270

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F +M +  + P ++  +++I  C  +G L                               
Sbjct: 271 FEDMQKLGLVPDQVAFVTVITACVGLGRLD------------------------------ 300

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
                 A  LF  M + +V+ WN +IS + +  C  +A + F +M  + V+    T+  +
Sbjct: 301 -----DACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSV 355

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           LS      AL  G  +H    KQGL  +V + ++L++MYAKC  +  A ++F     R++
Sbjct: 356 LSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNL 415

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
            +WNAM+ GY  +G   + +  F +M   G  P+  T+  +L+AC+    +  G+ +   
Sbjct: 416 VLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSF 475

Query: 503 MV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           ++ H       +E+   +VD+  + G L+EA +  + +  R N + W A++
Sbjct: 476 IIKHNFEYNLFVEN--TLVDMYAKCGALEEARQQFEFIRNRDN-VSWNAII 523



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 86/165 (52%), Gaps = 2/165 (1%)

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
           A A    K +H    K G      L +A+VD+YAKCG+V  A + F++   RDI  WN++
Sbjct: 94  AQASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSV 153

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           ++ Y   G  E+ +  F  ++  GV PN  T+  +L++C+    +  GK V   ++  +G
Sbjct: 154 LSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIK-MG 212

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
                   G ++D+  + G L +A ++  ++ + P+ + W A++A
Sbjct: 213 FEFNSFCEGSLIDMYSKCGSLVDARKIFDAV-VDPDTVSWTAMIA 256



 Score = 38.9 bits (89), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 14/119 (11%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           N +  +NS++  + KN    +AL I+  M+      D+ T   +L AC+       G+EI
Sbjct: 819 NDVISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREI 878

Query: 94  -----HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM---PNRDVVSWSTMI 144
                H + I   LD  A     +I +    G L  A    D++   PN   + W+T++
Sbjct: 879 FDIMVHSYKIVPRLDHCA----CMIDLLGRWGFLKEAEEFIDKLNFEPN--AMIWATLL 931


>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 651

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 223/595 (37%), Positives = 335/595 (56%), Gaps = 4/595 (0%)

Query: 31  NIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           N  + L  +NS     +      +AL ++  M+++G   +N T P +LKACA++      
Sbjct: 13  NRFSTLFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNS 72

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           + IH   +K+    + +V  A + MY +CG L  A  +F EMP RD+ SW+ M+ G+ + 
Sbjct: 73  QIIHAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQS 132

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           G  +    ++R MR   IRP  V ++ ++     V  +    A+++  +R      + V+
Sbjct: 133 GFLDRLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIR--IGVHMDVS 190

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQ--NSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           +A  LI  YSKCGNL  A+ LF+ +N    SVVSW  MI+ Y    +  + V  +  M++
Sbjct: 191 VANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLD 250

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
               P   TIL+L+  C     L  G  +H++ ++ G +  + + N L+ MY KC ++ S
Sbjct: 251 GGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHS 310

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           AR LF+GM  K  + W  +ISAYA+   + +A  LF  M+ +  +P+ VT++ L+S C +
Sbjct: 311 ARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQ 370

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
            GALE+GKW+  Y    GL+ +V++  AL+DMYAKCG  N A  LF     R +  W  M
Sbjct: 371 TGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRTVVSWTTM 430

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +    ++G  ++AL  F  M   G+KPN ITF+ +L AC+H GLV  G   F+ M    G
Sbjct: 431 ITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYG 490

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
           + P I+HY CMVDLLGR G L EA E+IKSMP  P+  +W ALL+A KLH    MG+  +
Sbjct: 491 INPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVS 550

Query: 569 TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
            Q+ E+EPQ     V M+NIYA A  W  VA +RR MK ++V+K PG S ++VNG
Sbjct: 551 EQLFELEPQVAVPYVEMANIYASAEMWEGVAAIRRNMKYLQVRKSPGQSIIQVNG 605


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  409 bits (1050), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 223/601 (37%), Positives = 357/601 (59%), Gaps = 6/601 (0%)

Query: 35  PLTRYNSLVT---SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           PLT   S VT    + ++++   A  +   + + G EV+ F   T+LK    + +     
Sbjct: 65  PLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCL 124

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            +H +  K G   DA+V  ALI  YS CG++ +AR +FD +  +D+VSW+ M+  Y    
Sbjct: 125 SVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENY 184

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
             E++L +  +MR M  RP+   + + +     +    +GK++H C ++ C D  L V I
Sbjct: 185 CHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGI 244

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
           A  L+++Y+K G +A A+Q F  + ++ ++ W++MIS Y + ++  E + LF  M + +V
Sbjct: 245 A--LLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSV 302

Query: 272 F-PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
             P+  T  S++  C  +  L LG  +H+ +L+ G + ++ ++NAL+D+Y KC EI ++ 
Sbjct: 303 VVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSV 362

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            LF G   K+ + WN +I  Y Q    +KA  LF +M    ++P EVT   +L       
Sbjct: 363 KLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLV 422

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           ALE G+ +H+   K     D ++  +L+DMYAKCG ++ A   F +   +D   WNA++ 
Sbjct: 423 ALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALIC 482

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           GY +HG G EAL  F  M++S  KPN +TF+G+L+ACS+AGL+ +G++ F  M+   G+ 
Sbjct: 483 GYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIE 542

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           P IEHY CMV LLGR+G  DEA ++I  +P +P+++VW ALL A  +HKN  +G++ A +
Sbjct: 543 PCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQR 602

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIR 630
           +LE+EPQ+   +VL+SN+YA A RW++VA VR+ MK+ +VKKEPG S VE  G+VH F  
Sbjct: 603 VLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQGVVHYFTV 662

Query: 631 G 631
           G
Sbjct: 663 G 663



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 10/264 (3%)

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           GK LH +IL++G    L   N L++ Y     +  A  LFD M   + + +  +   +++
Sbjct: 22  GKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSR 81

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
           +H   +A  L + +       N+     LL L       +    +H Y+ K G + D  +
Sbjct: 82  SHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFV 141

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
            TAL+D Y+ CG+V+ A ++F    ++D+  W  M+A Y  + C E++L+ F  M   G 
Sbjct: 142 GTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGY 201

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL---VPKIEHYG-CMVDLLGRAGLL 529
           +PN  T    L +C+       GKS     VHG  L     +  + G  +++L  ++G +
Sbjct: 202 RPNNFTISAALKSCNGLEAFKVGKS-----VHGCALKVCYDRDLYVGIALLELYTKSGEI 256

Query: 530 DEAHEMIKSMPLRPNMIVWGALLA 553
            EA +  + MP + ++I W  +++
Sbjct: 257 AEAQQFFEEMP-KDDLIPWSLMIS 279


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 208/547 (38%), Positives = 328/547 (59%), Gaps = 5/547 (0%)

Query: 86  MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIR 145
           + HL K IH   ++ GLD D Y+ N +++     G+   +  + D+    ++  ++TMIR
Sbjct: 23  LKHL-KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIR 81

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKD 204
           G       +E++E+   MR   + P       ++   A V D +LG  +H+ VV+  C+ 
Sbjct: 82  GLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEA 141

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
           +     +  +LI++Y+KCG +  A ++F+ +   +  SWT  ISGY+   +  E + +F 
Sbjct: 142 DAF---VKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFR 198

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
            ++E  + P   +++ ++  C   G L+ G+W+  YI  NG   ++ +A ALVD YGKC 
Sbjct: 199 RLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCG 258

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            +  AR++FDGM  K+++ W+++I  YA      +A +LF  M    ++P+   MVG+L 
Sbjct: 259 NMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLC 318

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
            C   GALE+G W    I       + +L TAL+DMYAKCG ++ A+ +F     +D  +
Sbjct: 319 SCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVV 378

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           WNA ++G  M G  ++AL  F  ME+SG+KP+  TF+GLL AC+HAGLV EG+  F+ M 
Sbjct: 379 WNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSME 438

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
               L P+IEHYGCMVDLLGRAG LDEAH++IKSMP+  N IVWGALL   +LH++  + 
Sbjct: 439 CVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLV 498

Query: 565 EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
           E+   +++ +EP + G  VL+SNIYA +++W + A +R +M E  VKK PG+S +EV+G+
Sbjct: 499 EVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPGYSWIEVDGV 558

Query: 625 VHKFIRG 631
           VH+F+ G
Sbjct: 559 VHQFLVG 565



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 143/459 (31%), Positives = 246/459 (53%), Gaps = 13/459 (2%)

Query: 8   LNLEQTRQCHAHIIKTHFKFSYTN----IINPLTR-----YNSLVTSYIKNNKPSSALNI 58
           L L++       +++  F F  TN    I++         +N+++   + N+    ++ I
Sbjct: 36  LGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEI 95

Query: 59  YAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSE 118
           Y  MRK G   D+FT P +LKACA+VL + LG ++H   +K G + DA+V  +LI +Y++
Sbjct: 96  YHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTK 155

Query: 119 CGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISM 178
           CG + +A  +FD++P+++  SW+  I GY   G   EA+++ R +  M +RP   +++ +
Sbjct: 156 CGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEV 215

Query: 179 VSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
           +S      D+  G+ I   +  N       V +ATAL+D Y KCGN+  A+ +F+ + + 
Sbjct: 216 LSACKRTGDLRSGEWIDEYITENGMVRN--VFVATALVDFYGKCGNMERARSVFDGMLEK 273

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
           ++VSW+ MI GY       E + LF +M+ E + P    ++ ++  C  +G L+LG W  
Sbjct: 274 NIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWAS 333

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
             I  N F  +  +  AL+DMY KC  +  A  +F GM+ KD ++WNA IS  A +  + 
Sbjct: 334 NLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVK 393

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVDVILKTAL 417
            A  LF  M+ S ++P+  T VGLL  CT AG +E G+     +E    L  ++     +
Sbjct: 394 DALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCM 453

Query: 418 VDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMH 455
           VD+  + G ++ A++L  S  +  +  +W A++ G  +H
Sbjct: 454 VDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLH 492


>gi|242066256|ref|XP_002454417.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
 gi|241934248|gb|EES07393.1| hypothetical protein SORBIDRAFT_04g030430 [Sorghum bicolor]
          Length = 703

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 217/606 (35%), Positives = 345/606 (56%), Gaps = 8/606 (1%)

Query: 29  YTNIINPLTRY-NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +    +P  R  N+L+ ++I+  +  +A+ +   +R     +D FT   +L+ACA +   
Sbjct: 57  FDEFPSPTPRLANALLRAHIRARQWRAAILLGPRLR---VRLDGFTFSLLLRACAALPSL 113

Query: 88  HLGKEIHGFAIKN-GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
             G+ +H  AI++     DA+V+ A++QMY+ CG +V A   +  +   D+V  ++++ G
Sbjct: 114 AHGRAVHAVAIRSCTASEDAFVATAIVQMYARCGDMVGAINAYGVLEKPDIVLRTSVVTG 173

Query: 147 YHRGGLPEEALEVM-REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           Y + G+ EEALE   R +    +  + V ++S +S  A +  V  G+A HA VVRN    
Sbjct: 174 YEQNGMAEEALEFFARNVVGQGVMLTPVTLVSAMSAAAQLGHVRKGQACHAYVVRNSLGY 233

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
            L  A+   ++  Y K G+   + +LF  +    V++W+ MI GY++  + +EG+R++ E
Sbjct: 234 DL--ALVNTVLSFYVKIGDFQASMRLFEGMTDRDVITWSCMIKGYVQHGDAHEGLRMYRE 291

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M++  V P+ +T++S++  C  V   + GK +H   +  G E  + +A ALVDMY KC  
Sbjct: 292 MVKARVQPNSVTLVSVLQACALVVDAEEGKRVHRVAVSIGCELEVGVATALVDMYMKCSC 351

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
              A  LF  M  KDV+ W AVI    Q     ++  +F  M +    P+ +TMV +L+ 
Sbjct: 352 HEEAMCLFHRMPKKDVVAWAAVIGGLTQNELPGESLHVFKCMLLDDHVPDAITMVKVLAA 411

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
           C+E G   +   LH Y+ + G   +  +  AL+D+Y+KCGD++ A R+F     +DI +W
Sbjct: 412 CSEFGGTRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDIDSAVRVFEGTTEKDIVVW 471

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
            +M+AGYG HG G+EA+  +  M  S ++PN +TF+ +L+ACSH+GLV EG  +FD M  
Sbjct: 472 GSMIAGYGAHGLGQEAVALYQRMIASSIQPNSVTFVSVLSACSHSGLVQEGIQIFDSMTQ 531

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
             G+VP  EH   MVDLLGRAG L EA   I+ M  R     W ALLAA + H N  M +
Sbjct: 532 VFGVVPNAEHQSAMVDLLGRAGELQEAIRFIRGMDGRAVAHTWCALLAACREHNNTKMSK 591

Query: 566 IAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLV 625
           +AA  +L+++P + GY  L++NIYA   +W  V   R +++   ++K PG+SSVEV  LV
Sbjct: 592 VAAKSLLKLDPDHVGYYNLLTNIYAYDEKWESVKDTRDMVRGRDLRKVPGYSSVEVGNLV 651

Query: 626 HKFIRG 631
           H FI G
Sbjct: 652 HTFIAG 657



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 95/204 (46%), Gaps = 8/204 (3%)

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           LHA +LR+G   S     A V  +        AR LFD   S    + NA++ A+ +A  
Sbjct: 24  LHANLLRSGLLHSSHHLTAHVLAW---YPPGLARDLFDEFPSPTPRLANALLRAHIRARQ 80

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY-IEKQGLEVDVILKT 415
              A  L   +   +VR +  T   LL  C    +L  G+ +H   I       D  + T
Sbjct: 81  WRAAILLGPRL---RVRLDGFTFSLLLRACAALPSLAHGRAVHAVAIRSCTASEDAFVAT 137

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV-DMERSGVK 474
           A+V MYA+CGD+ GA   +      DI +  +++ GY  +G  EEAL FF  ++   GV 
Sbjct: 138 AIVQMYARCGDMVGAINAYGVLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVM 197

Query: 475 PNGITFIGLLNACSHAGLVTEGKS 498
              +T +  ++A +  G V +G++
Sbjct: 198 LTPVTLVSAMSAAAQLGHVRKGQA 221


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 218/602 (36%), Positives = 350/602 (58%), Gaps = 40/602 (6%)

Query: 65  NGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQM--YSECGSL 122
           N  + +  T+P ++  CA     HL K++H   ++ GL  D   +  L      S   SL
Sbjct: 24  NEQKSNPSTVPILIDKCAN--KKHL-KQLHAHMLRTGLFFDPPSATKLFTACALSSPSSL 80

Query: 123 VSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR-PSEVAMISMVSL 181
             A  +FD++P  ++ +W+T+IR +     P + L V  +M     R P+      ++  
Sbjct: 81  DYACKVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKA 140

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
             +V+ +  G+AIH  V++      L   I+ +LI  YS  G+L  A  +F+++ +  +V
Sbjct: 141 ATEVSSLLAGQAIHGMVMKASFGSDL--FISNSLIHFYSSLGDLDSAYLVFSKIVEKDIV 198

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           SW  MISG+++     E ++LF  M  EN  P+ +T++ ++  C     L+ G+W   YI
Sbjct: 199 SWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYI 258

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM------------------- 342
            RNG + +L ++NA++DMY KC  +  AR LFD M+ KD++                   
Sbjct: 259 ERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAAR 318

Query: 343 ------------IWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEA 389
                        WNA+IS+Y Q     +A  +F  ++++K  +PNEVT+   L+ C + 
Sbjct: 319 RVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQL 378

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           GA+++G W+H YI+KQG++++  + T+L+DMY+KCG +  A  +F     RD+ +W+AM+
Sbjct: 379 GAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMI 438

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           AG  MHG G  A+  F  M+ + VKPN +TF  LL ACSH+GLV EG+  F++M    G+
Sbjct: 439 AGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGV 498

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
           VP  +HY CMVD+LGRAG L+EA E+I+ MP+ P+  VWGALL A +++ N  + E+A +
Sbjct: 499 VPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACS 558

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           ++LE +  N+G  VL+SNIYA A +W+ V+ +R+ MK   ++KEPG SS+EVNG++H+F+
Sbjct: 559 RLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFL 618

Query: 630 RG 631
            G
Sbjct: 619 VG 620



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/509 (27%), Positives = 247/509 (48%), Gaps = 63/509 (12%)

Query: 9   NLEQTRQCHAHIIKTHFKFS-------------------------YTNIINP-LTRYNSL 42
           N +  +Q HAH+++T   F                          +  I  P L  +N+L
Sbjct: 42  NKKHLKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTL 101

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDN-FTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           + ++  + KP   L ++  M        N +T P ++KA  +V     G+ IHG  +K  
Sbjct: 102 IRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKAS 161

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
              D ++SN+LI  YS  G L SA  +F ++  +D+VSW++MI G+ +GG PEEAL++ +
Sbjct: 162 FGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFK 221

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
            M+  + RP+ V M+ ++S  A   D++ G+     + RN  D  + + ++ A++DMY K
Sbjct: 222 RMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGID--INLILSNAMLDMYVK 279

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE------------ 269
           CG+L  A++LF+++ +  +VSWT MI GY +  + +   R+F  M  E            
Sbjct: 280 CGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSY 339

Query: 270 --------------------NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
                               N  P+E+T+ S +  C  +G + LG W+H YI + G + +
Sbjct: 340 QQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLN 399

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
             +  +L+DMY KC  +  A  +F  ++ +DV +W+A+I+  A       A +LF  M+ 
Sbjct: 400 FHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQE 459

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK-QGLEVDVILKTALVDMYAKCGDVN 428
           +KV+PN VT   LL  C+ +G ++ G+     +    G+         +VD+  + G + 
Sbjct: 460 TKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLE 519

Query: 429 GAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
            A  L  +  I     +W A++    ++G
Sbjct: 520 EAVELIEKMPIVPSASVWGALLGACRIYG 548


>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 221/624 (35%), Positives = 364/624 (58%), Gaps = 9/624 (1%)

Query: 10  LEQTRQCHAHIIKTHFKFSYTNIINP--LTRYNSLVTSYIKNNKPSSALNIY-AFMRKNG 66
           + Q   CH +    H K  + N+ NP  ++ +N L+  Y KN     AL ++   +    
Sbjct: 45  INQYLSCHLY---DHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPY 101

Query: 67  SEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSAR 126
            + D++T P++ KAC  +    LGK IH   IK GL  D  V ++L+ MY +C +   A 
Sbjct: 102 LKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAI 161

Query: 127 YLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
           +LF+EMP +DV  W+T+I  Y++ G  ++ALE    MR     P+ V + + +S  A + 
Sbjct: 162 WLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLL 221

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
           D++ G  IH  ++ +     L   I++AL+DMY KCG+L  A ++F ++ + +VV+W  M
Sbjct: 222 DLNRGMEIHEELINS--GFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSM 279

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           ISGY    +I   ++LF  M  E V P+  T+ SLI+ C     L  GK++H Y +RN  
Sbjct: 280 ISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRI 339

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
           +  + + ++L+D+Y KC ++  A  +F  +    V+ WN +IS Y     + +A  LF  
Sbjct: 340 QPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSE 399

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           M+ S V  + +T   +L+ C++  ALE GK +H  I ++ L+ + ++  AL+DMYAKCG 
Sbjct: 400 MRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGA 459

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           V+ A+ +F     RD+  W +M+  YG HG    AL  F +M +S VKP+ + F+ +L+A
Sbjct: 460 VDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSA 519

Query: 487 CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP-LRPNM 545
           C HAGLV EG   F++M++  G++P++EHY C++DLLGRAG L EA+E+++  P +R ++
Sbjct: 520 CGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDV 579

Query: 546 IVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVM 605
            +   L +A +LH+N  +G   A  +++ +P +    +L+SN+YA A++W++V  VR  M
Sbjct: 580 ELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKM 639

Query: 606 KEIRVKKEPGFSSVEVNGLVHKFI 629
           KE+ +KK PG S +E+N  +  F 
Sbjct: 640 KELGLKKNPGCSWIEINQKILPFF 663



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 12/181 (6%)

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
           ++ LL  C  + +L+ GK +H  +   GL+ D+ L   L++ Y  C   + A  +F    
Sbjct: 6   LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNME 65

Query: 439 YR-DICMWNAMMAGYGMHGCGEEALIFFVD-MERSGVKPNGITFIGLLNACSHAGLVTEG 496
              +I +WN +MAGY  +    EAL  F   +    +KP+  T+  +  AC   GL    
Sbjct: 66  NPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKAC--GGL---H 120

Query: 497 KSVFDKMVHG----LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           + V  KM+H      GL+  I     +V + G+    ++A  +   MP   ++  W  ++
Sbjct: 121 RYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMP-EKDVACWNTVI 179

Query: 553 A 553
           +
Sbjct: 180 S 180


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/581 (37%), Positives = 334/581 (57%), Gaps = 35/581 (6%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           K+IH   IK GL  D      +I      E G ++ AR +FD +P   +  W+TMI+GY 
Sbjct: 24  KQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIKGYS 83

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           R   P+  + +   M   +I+P       ++  F     +  GK +    V++  D  L 
Sbjct: 84  RINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLF 143

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V    A I M+S C  +  A+++F+  +   VV+W +M+SGY R  +  +   LF EM +
Sbjct: 144 VQ--KAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEMEK 201

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
             V P+ +T++ ++  C  +  L+ GK ++ YI     E +L + N L+DM+  C E+  
Sbjct: 202 RGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDE 261

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCID------------------------------ 358
           A+++FD MK++DV+ W ++++ +A    ID                              
Sbjct: 262 AQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRF 321

Query: 359 -KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
            +A  LF  M++S V+P+E TMV +L+ C   GALE+G+W+ TYI+K  ++ D  +  AL
Sbjct: 322 IEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNAL 381

Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
           +DMY KCG+V  A ++F E  ++D   W AM+ G  ++G GEEAL  F +M  + + P+ 
Sbjct: 382 IDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDE 441

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK 537
           IT+IG+L AC+HAG+V +G+S F  M    G+ P + HYGCMVDLLGRAG L+EAHE+I 
Sbjct: 442 ITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIV 501

Query: 538 SMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWND 597
           +MP++PN IVWG+LL A ++HKN  + E+AA QILE+EP+N    VL+ NIYA   RW +
Sbjct: 502 NMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWEN 561

Query: 598 VAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           +  VR++M E  +KK PG S +E+NG V++F+ G   + +S
Sbjct: 562 LRQVRKLMMERGIKKTPGCSLMELNGNVYEFVAGDQSHPQS 602



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 224/450 (49%), Gaps = 35/450 (7%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y + N P + +++Y  M  +  + D FT P +LK   + +    GK +   A+
Sbjct: 75  WNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAV 134

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G D + +V  A I M+S C  +  AR +FD     +VV+W+ M+ GY+R    +++  
Sbjct: 135 KHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKM 194

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  EM    + P+ V ++ M+S  + + D++ GK I+  +     +  L   +   LIDM
Sbjct: 195 LFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNL--ILENVLIDM 252

Query: 219 YSKCGNLAYAKQLFNRLNQNSV-------------------------------VSWTVMI 247
           ++ CG +  A+ +F+ +    V                               VSWT MI
Sbjct: 253 FAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMI 312

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
            GY+R N   E + LF EM   NV P E T++S++  C  +G L+LG+W+  YI +N  +
Sbjct: 313 DGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIK 372

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
               + NAL+DMY KC  +  A+ +F  M  KD   W A+I   A     ++A  +F +M
Sbjct: 373 NDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNM 432

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGD 426
             + + P+E+T +G+L  CT AG +E G+     +  Q G++ +V     +VD+  + G 
Sbjct: 433 IEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGR 492

Query: 427 VNGAYR-LFSEAIYRDICMWNAMMAGYGMH 455
           +  A+  + +  +  +  +W +++    +H
Sbjct: 493 LEEAHEVIVNMPVKPNSIVWGSLLGACRVH 522



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 118/239 (49%), Gaps = 9/239 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++  Y++ N+   AL ++  M+ +  + D FT+ +IL ACA +    LG+ +  +  
Sbjct: 308 WTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYID 367

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KN +  D +V NALI MY +CG++  A+ +F EM ++D  +W+ MI G    G  EEAL 
Sbjct: 368 KNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALA 427

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M    I P E+  I ++        V+ G++    +       K  V     ++D+
Sbjct: 428 MFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQ-HGIKPNVTHYGCMVDL 486

Query: 219 YSKCGNLAYAKQLFNRL--NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
             + G L  A ++   +    NS+V W  ++     C  +++ V+L AEM  + +   E
Sbjct: 487 LGRAGRLEEAHEVIVNMPVKPNSIV-WGSLLGA---C-RVHKNVQL-AEMAAKQILELE 539


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/599 (34%), Positives = 355/599 (59%), Gaps = 4/599 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +NSL++ Y  N   + AL IY   R  G   D++T+ ++L+AC  +     G  
Sbjct: 237 LRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDI 296

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IHG   K G+  D  V+N L+ MY +   L+  R +FD+M  RD VSW+TMI GY + GL
Sbjct: 297 IHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGL 356

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            EE++++  EM     +P  + + S++     + D++ GK +H  ++ +    +     +
Sbjct: 357 YEESIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITS--GYECDTTAS 413

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
             LI+MY+KCGNL  ++++F+ +     VSW  MI+ YI+    +E ++LF +M++ +V 
Sbjct: 414 NILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLF-KMMKTDVK 472

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P  +T + L+     +G L LGK LH  + + GF  ++ ++N LVDMY KC E+  +  +
Sbjct: 473 PDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKV 532

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ MK++D++ WN +I++   +   +    +   M+   V P+  TM+ +L +C+   A 
Sbjct: 533 FENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAK 592

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
             GK +H  I K GLE DV +   L++MY+KCG +  ++++F     +D+  W A+++  
Sbjct: 593 RQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISAC 652

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
           GM+G G++A+  F +ME +G+ P+ + F+ ++ ACSH+GLV EG + F +M     + P+
Sbjct: 653 GMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPR 712

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           IEHY C+VDLL R+ LLD+A + I SMPL+P+  +WGALL+A ++  +  + +  + +I+
Sbjct: 713 IEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERII 772

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           E+ P + GY VL+SN+YA   +W+ V  +R+ +K   +KK+PG S +E+   V+ F  G
Sbjct: 773 ELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTG 831



 Score =  303 bits (776), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 174/549 (31%), Positives = 290/549 (52%), Gaps = 17/549 (3%)

Query: 17  HAHIIKTHFKFSYTNIINP---LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT 73
           +AH       FS   + +P   +  +NS++ +   N   S AL++Y+  ++   + D +T
Sbjct: 117 YAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYT 176

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
            P+++ ACA +L   + K IH   +  G   D Y+ NALI MY     L  AR +F+EMP
Sbjct: 177 FPSVINACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP 236

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
            RDVVSW+++I GY+  G   EALE+    R + + P    M S++     +  V+ G  
Sbjct: 237 LRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDI 296

Query: 194 IHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
           IH  +      EK+G    V +   L+ MY K   L   +++F+++     VSW  MI G
Sbjct: 297 IHGLI------EKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICG 350

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
           Y +     E ++LF EM+ +   P  +TI S++  CG +G L+ GK++H Y++ +G+E  
Sbjct: 351 YSQVGLYEESIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECD 409

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
              +N L++MY KC  + +++ +F GMK KD + WN++I+ Y Q    D+A +LF  MK 
Sbjct: 410 TTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFKMMK- 468

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
           + V+P+ VT V LLS+ T+ G L +GK LH  + K G   ++++   LVDMYAKCG++  
Sbjct: 469 TDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGD 528

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           + ++F     RDI  WN ++A           L     M   GV P+  T + +L  CS 
Sbjct: 529 SLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSL 588

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
                +GK +    +  LGL   +     ++++  + G L  + ++ K M  + +++ W 
Sbjct: 589 LAAKRQGKEIHG-CIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTK-DVVTWT 646

Query: 550 ALLAASKLH 558
           AL++A  ++
Sbjct: 647 ALISACGMY 655



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 171/353 (48%), Gaps = 8/353 (2%)

Query: 237 QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
            N+V  W  +I         +E + L++E     + P   T  S+I  C  +   ++ K 
Sbjct: 136 SNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKS 195

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           +H  +L  GF   L + NAL+DMY +  ++  AR +F+ M  +DV+ WN++IS Y     
Sbjct: 196 IHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGY 255

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
            ++A E++   +   V P+  TM  +L  C   G++E G  +H  IEK G++ DVI+   
Sbjct: 256 WNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNG 315

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           L+ MY K   +    R+F + + RD   WN M+ GY   G  EE++  F++M     KP+
Sbjct: 316 LLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQ-FKPD 374

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
            +T   +L AC H G +  GK V D M+   G          ++++  + G L  + E+ 
Sbjct: 375 LLTITSILQACGHLGDLEFGKYVHDYMITS-GYECDTTASNILINMYAKCGNLLASQEVF 433

Query: 537 KSMPLRPNMIVWGALLAASKLHKNPSMGE---IAATQILEIEPQNYGYNVLMS 586
             M  + + + W +++      +N S  E   +      +++P +  Y +L+S
Sbjct: 434 SGMKCK-DSVSWNSMINV--YIQNGSFDEAMKLFKMMKTDVKPDSVTYVMLLS 483


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 219/608 (36%), Positives = 335/608 (55%), Gaps = 52/608 (8%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLV--------- 123
           T  ++L+ CA +     G+ IH     N ++ D  + + L+ MY  CG L          
Sbjct: 103 TYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKV 162

Query: 124 ----------------------------------------SARYLFDEMPNRDVVSWSTM 143
                                                   SAR LFDE+ +RDV+SW++M
Sbjct: 163 ANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSM 222

Query: 144 IRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
           I GY   GL E+ L++  +M  + I      M+S+V+  ++   + LG+A+H   ++   
Sbjct: 223 ISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASF 282

Query: 204 DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
            ++L   +   L+DMYSK GNL  A Q+F  + + SVVSWT MI+GY R    +  VRLF
Sbjct: 283 GKEL--TLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLF 340

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
            EM +E + P   TI +++  C   G L+ GK +H YI  N  +  L ++NAL+DMY KC
Sbjct: 341 HEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKC 400

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
             +  A ++F  M+ KD++ WN +I  Y++    ++A  LF+ M+ +  +PN +TM  +L
Sbjct: 401 GSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACIL 459

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
             C    ALE G+ +H +I + G  +D  +  ALVDMY KCG +  A  LF     +D+ 
Sbjct: 460 PACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLV 519

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            W  M+AGYGMHG G EA+  F +M  SG++P+ ++FI +L ACSH+GL+ EG   F+ M
Sbjct: 520 SWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMM 579

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
            +   + PK EHY C+VDLL RAG L +A++ IK MP+ P+  +WGALL   +++ +  +
Sbjct: 580 RNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKL 639

Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
            E  A  + E+EP+N GY VL++NIYA A +W +V  +R  +    ++K PG S +E+ G
Sbjct: 640 AEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIEIKG 699

Query: 624 LVHKFIRG 631
            VH F+ G
Sbjct: 700 KVHIFVTG 707



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 133/415 (32%), Positives = 222/415 (53%), Gaps = 5/415 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++ Y+ N      L+++  M   G   D  T+ +++  C+   M  LG+ +HG+AI
Sbjct: 219 WNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAI 278

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K     +  ++N L+ MYS+ G+L SA  +F+ M  R VVSW++MI GY R GL + ++ 
Sbjct: 279 KASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVR 338

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  EM    I P    + +++   A    ++ GK +H  +  N     L V  + AL+DM
Sbjct: 339 LFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFV--SNALMDM 396

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG++  A  +F+ +    +VSW  MI GY + +  NE + LF EM + N  P+ IT+
Sbjct: 397 YAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEM-QYNSKPNSITM 455

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
             ++  C  +  L+ G+ +H +ILRNGF     +ANALVDMY KC  +  AR LFD +  
Sbjct: 456 ACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPE 515

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD++ W  +I+ Y       +A   F  M+ S + P+EV+ + +L  C+ +G L+ G   
Sbjct: 516 KDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGF 575

Query: 399 HTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFS-EAIYRDICMWNAMMAG 451
              +     +E        +VD+ A+ G+++ AY+      I  D  +W A++ G
Sbjct: 576 FNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCG 630



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 121/373 (32%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + S++  Y +      ++ ++  M K G   D FTI TIL ACA   +   GK++H +  
Sbjct: 320 WTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIK 379

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +N +  D +VSNAL+ MY++CGS+  A  +F EM  +D+VSW+TMI GY +  LP EAL 
Sbjct: 380 ENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALN 439

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  EM++ + +P+ + M  ++   A +A ++ G+ IH  ++RN     L   +A AL+DM
Sbjct: 440 LFVEMQY-NSKPNSITMACILPACASLAALERGQEIHGHILRN--GFSLDRHVANALVDM 496

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCG L  A+ LF+ + +  +VSWTVMI+GY      +E +  F EM    + P E++ 
Sbjct: 497 YLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSF 556

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNG--FEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           +S++  C   G L  G W    ++RN    E        +VD+  +   +  A      M
Sbjct: 557 ISILYACSHSGLLDEG-WGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMM 615

Query: 337 K-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP-NEVTMVGLLSLCTEAGALEM 394
               D  IW A++      H +  A ++  H  V ++ P N    V L ++  EA   E 
Sbjct: 616 PIEPDATIWGALLCGCRIYHDVKLAEKVAEH--VFELEPENTGYYVLLANIYAEAEKWEE 673

Query: 395 GKWLHTYIEKQGL 407
            K L   I ++GL
Sbjct: 674 VKKLRERIGRRGL 686



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/244 (34%), Positives = 132/244 (54%), Gaps = 8/244 (3%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +N+++  Y KN+ P+ ALN++  M+ N S+ ++ T+  IL ACA +     G+E
Sbjct: 415 VKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYN-SKPNSITMACILPACASLAALERGQE 473

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IHG  ++NG   D +V+NAL+ MY +CG+L  AR LFD +P +D+VSW+ MI GY   G 
Sbjct: 474 IHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGY 533

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
             EA+    EMR   I P EV+ IS++   +    +D G      +  NC  E      A
Sbjct: 534 GSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYA 593

Query: 213 TALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
             ++D+ ++ GNL+ A +    +  +     W  ++ G   C  I   V+L AE + E+V
Sbjct: 594 -CIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCG---C-RIYHDVKL-AEKVAEHV 647

Query: 272 FPSE 275
           F  E
Sbjct: 648 FELE 651


>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 638

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 210/598 (35%), Positives = 344/598 (57%), Gaps = 6/598 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L ++N+L+ S  ++      +  ++ M ++  + DNFT+P  LKAC ++     G+ IHG
Sbjct: 6   LYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYGEMIHG 65

Query: 96  FAIKN-GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           F  KN  L  D YV ++LI MY +CG +  A  +F+E+   D+V+WS+M+ G+ + G P 
Sbjct: 66  FLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNGSPY 125

Query: 155 EALEVMREMRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           +A+E  R M    D+ P  V +I++VS    +++  LG+ +H  V+R      L  ++  
Sbjct: 126 QAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDL--SLVN 183

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           +L++ Y+K      A  LF  + +  V+SW+ +I+ Y++     E +R+F EMI++   P
Sbjct: 184 SLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTEP 243

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +  T+L ++  C     L+ G+  H   +R G E  + ++ ALVDMY KC     A  +F
Sbjct: 244 NVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVF 303

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELF-IHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
             +  KDV+ W A+IS +       ++ E F I +  +  RP+ + M+ +L  C+E G L
Sbjct: 304 SRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGFL 363

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           +  +  H+Y+ K G + +  +  +LV++Y++CG +  A ++F+E   +D  +W +++ GY
Sbjct: 364 KQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITGY 423

Query: 453 GMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           G+HG G +AL  F  M RS  VKPN +TF+ +L+ACSHAGL+ EG  +F+ MV+   L P
Sbjct: 424 GIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLAP 483

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
            +EHY  +VDLLGR G LD A E+ K MP  P   + G LL A ++H+N  M E  A Q+
Sbjct: 484 NLEHYAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKQL 543

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            E+E  + GY +LMSN+Y V   W +V  +R  +K+  +KK    S +E+   VHKF+
Sbjct: 544 FELESNHAGYYMLMSNMYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHKFV 601



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 165/326 (50%), Gaps = 4/326 (1%)

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           + + ++  W  ++    R     + +  F++M  +   P   T+   +  CG +  ++ G
Sbjct: 1   MTKRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGELREVKYG 60

Query: 295 KWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           + +H ++ +N      L + ++L+ MY KC  +  A  +F+ ++  D++ W++++S + +
Sbjct: 61  EMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEK 120

Query: 354 AHCIDKAFELFIHMKV-SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
                +A E F  M   S V P+ VT++ L+S CT+     +G+ +H ++ ++G   D+ 
Sbjct: 121 NGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLS 180

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           L  +L++ YAK      A  LF     +D+  W+ ++A Y  +G   EAL  F +M   G
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDG 240

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
            +PN  T + +L AC+ A  + +G+   +  +   GL  +++    +VD+  +    +EA
Sbjct: 241 TEPNVATVLCVLQACAAANDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEEA 299

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLH 558
           + +   +P + +++ W AL++   L+
Sbjct: 300 YAVFSRIP-KKDVVSWVALISGFTLN 324



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 156/331 (47%), Gaps = 38/331 (11%)

Query: 34  NPLTRYNSLVTS-------------------------------YIKNNKPSSALNIYAFM 62
           N L+  NSL+                                 Y++N   + AL ++  M
Sbjct: 177 NDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEM 236

Query: 63  RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSL 122
             +G+E +  T+  +L+ACA       G++ H  AI+ GL+ +  VS AL+ MY +C S 
Sbjct: 237 IDDGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSP 296

Query: 123 VSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM-DIRPSEVAMISMVSL 181
             A  +F  +P +DVVSW  +I G+   G+   ++E    M    + RP  + M+ ++  
Sbjct: 297 EEAYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGS 356

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
            +++  +   +  H+ V++   D      I  +L+++YS+CG+L  A ++FN +     V
Sbjct: 357 CSELGFLKQAECFHSYVIKYGFDS--NPFIGASLVELYSRCGSLGNASKVFNEIALKDTV 414

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEEN-VFPSEITILSLIIECGFVGGLQLGKWLHAY 300
            WT +I+GY    +  + +  F  M+  + V P+E+T LS++  C   G +  G  +   
Sbjct: 415 VWTSLITGYGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFE- 473

Query: 301 ILRNGFEFS--LAMANALVDMYGKCREIRSA 329
           ++ N +  +  L     LVD+ G+  E+ +A
Sbjct: 474 LMVNDYRLAPNLEHYAVLVDLLGRVGELDTA 504


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/548 (38%), Positives = 332/548 (60%), Gaps = 18/548 (3%)

Query: 92  EIHGFAIKNG-LDGDAYVSNALIQMYSECGSLVS---ARYLFDEMPNRDVVSWSTMIRGY 147
           ++H   IK+G L G A   ++L++  +   +L+    + +     P      ++ ++R +
Sbjct: 34  QLHAALIKSGELTGSAKSFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAF 93

Query: 148 HRGGLPEEALEVMREMRFM------DIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVR 200
              G PE+AL +  EM         D   +  A+ S   + A    +D+G+ + A  V R
Sbjct: 94  LHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCA----LDVGRGVQAYAVKR 149

Query: 201 NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
               ++    + ++LI MY+ CG++A A+ +F+   ++ VV W  +++ Y++  +  E V
Sbjct: 150 GLVADRF---VLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVV 206

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
            +F  M+E  V   E+T++S++  CG +G  +LGKW+  ++   G   +  +  AL+DMY
Sbjct: 207 EMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMY 266

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
            KC EI  AR LFDGM+S+DV+ W+A+IS Y QA    +A  LF  M++++V PN+VTMV
Sbjct: 267 AKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMV 326

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
            +LS C   GALE GKW+H+Y+ ++ L +  IL TALVD YAKCG ++ A   F     +
Sbjct: 327 SVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVK 386

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           +   W A++ G   +G G EAL  F  M  +G++P  +TFIG+L ACSH+ LV EG+  F
Sbjct: 387 NSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHF 446

Query: 501 DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
           D M    G+ P++EHYGCMVDLLGRAGL+DEA++ I++MP+ PN ++W ALL++  +H+N
Sbjct: 447 DSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRN 506

Query: 561 PSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
             +GE A  QI+ + P + G  VL+SNIYA A +W D A VR+ MK+  ++K PG S +E
Sbjct: 507 VGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIE 566

Query: 621 VNGLVHKF 628
           ++G+V +F
Sbjct: 567 LDGVVFEF 574



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/445 (30%), Positives = 234/445 (52%), Gaps = 19/445 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGS--EVDNFTIPTILKACAQVLMTHLGKEIHGF 96
           YN L+ +++    P  AL+++  M    S    D  T    LK+C+++    +G+ +  +
Sbjct: 86  YNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAY 145

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
           A+K GL  D +V ++LI MY+ CG + +AR +FD      VV W+ ++  Y + G   E 
Sbjct: 146 AVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEV 205

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACV-----VRNCKDEKLGVAI 211
           +E+ + M  + +   EV ++S+V+    + D  LGK +   V      RN K       +
Sbjct: 206 VEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPK-------L 258

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
            TAL+DMY+KCG +  A++LF+ +    VV+W+ MISGY + ++  E + LF+EM    V
Sbjct: 259 VTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARV 318

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P+++T++S++  C  +G L+ GKW+H+Y+ R     +  +  ALVD Y KC  I  A  
Sbjct: 319 EPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVE 378

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
            F+ M  K+   W A+I   A      +A ELF  M+ + + P +VT +G+L  C+ +  
Sbjct: 379 AFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCL 438

Query: 392 LEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMM 449
           +E G +   +     G++  V     +VD+  + G V+ AY+   +  I  +  +W A++
Sbjct: 439 VEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALL 498

Query: 450 AGYGMH---GCGEEALIFFVDMERS 471
           +   +H   G GEEAL   + +  S
Sbjct: 499 SSCAVHRNVGIGEEALKQIISLNPS 523


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/591 (35%), Positives = 343/591 (58%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  +    +   AL  Y  M   G+  D +T P ++KAC  +    LG+ +H    
Sbjct: 115 WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G + D +V ++LI+ YSE G +  ARYLFD MP++D V W+ M+ GY + G  + A  
Sbjct: 175 FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATG 234

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V  EMR  +  P+ V    ++S+ A    ++ G  +H  VV +  +    VA   ALID+
Sbjct: 235 VFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDI 294

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC ++  A+++F++     +V  T MISGY+     N  + +F  +++E +  + +T+
Sbjct: 295 YFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTL 354

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  L LGK LH +IL+NG   S  + +A++DMY KC  +  A   F G+  
Sbjct: 355 ASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISD 414

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN++I++ +Q    ++A +LF  M ++  + + V++   LS C    AL  GK +
Sbjct: 415 KDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEI 474

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ +     D+  ++AL+DMY+KCG+++ A R+F     ++   WN+++A YG HG  
Sbjct: 475 HAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRL 534

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +++L  F  M   G++P+ +TF+ +++AC HAG V EG   F  M   LG++ ++EHY C
Sbjct: 535 KDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYAC 594

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDL GRAG L+EA  MI SMP  P+  VWG LL A +LH N  + E+A+  + +++PQN
Sbjct: 595 MVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQN 654

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            GY VL+SN++A A +W  V  +R +MKE  V+K PG S ++VN   H F+
Sbjct: 655 SGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTHMFV 705



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 236/485 (48%), Gaps = 6/485 (1%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           +IL+ C        G++ H   + NG+  +  +   L+ MY  CG+ + A+ +F ++   
Sbjct: 51  SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
               W+ MIRG+   G  + AL    +M      P +     ++     +  V LG+ +H
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
             +       +L V + ++LI  YS+ G +  A+ LF+R+     V W VM++GY++  +
Sbjct: 171 DKI--QFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN- 314
            +    +F EM      P+ +T   ++  C     +  G  LH  ++ +G E    +AN 
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288

Query: 315 -ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
            AL+D+Y KCR++  AR +FD     D+++  A+IS Y      + A E+F  +   ++R
Sbjct: 289 FALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMR 348

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
            N VT+  +L  C    AL +GK LH +I K G      + +A++DMYAKCG ++ A++ 
Sbjct: 349 ANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQT 408

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F     +D   WN+M+     +G  EEA+  F  M  +G K + ++    L+AC++   +
Sbjct: 409 FIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPAL 468

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
             GK +   M+ G      +     ++D+  + G LD A  +  +M  + N + W +++A
Sbjct: 469 HYGKEIHAFMMRG-AFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEK-NEVSWNSIIA 526

Query: 554 ASKLH 558
           A   H
Sbjct: 527 AYGNH 531



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 191/399 (47%), Gaps = 26/399 (6%)

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQ 230
           ++S++    D + +  G+  HA ++ N      G+     + T L+ MY  CG    AK 
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVN------GIGYNGILGTKLLGMYVLCGAFLDAKN 102

Query: 231 LFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGG 290
           +F +L       W  MI G+    + +  +  + +M+     P + T   +I  CG +  
Sbjct: 103 IFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNS 162

Query: 291 LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
           + LG+ +H  I   GFE  + + ++L+  Y +   I  AR LFD M SKD ++WN +++ 
Sbjct: 163 VALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNG 222

Query: 351 YAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
           Y +    D A  +F+ M+ ++  PN VT   +LS+C     +  G  LH  +   GLE+D
Sbjct: 223 YVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMD 282

Query: 411 --VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
             V    AL+D+Y KC DV  A ++F +    DI +  AM++GY ++G    AL  F  +
Sbjct: 283 SPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWL 342

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG-CMV-----DL 522
            +  ++ N +T   +L AC+    +T GK +        G + K  H G C V     D+
Sbjct: 343 LQERMRANSVTLASVLPACAGLAALTLGKELH-------GHILKNGHGGSCYVGSAIMDM 395

Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
             + G LD AH+    +  + + + W +++ +   +  P
Sbjct: 396 YAKCGRLDLAHQTFIGISDK-DAVCWNSMITSCSQNGKP 433


>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 218/600 (36%), Positives = 348/600 (58%), Gaps = 25/600 (4%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           L++ Y+   KP S  N         +  D F   ++L+ C  +      K+IH   + N 
Sbjct: 10  LISRYLNLQKPHSKPN-----PNRQALSDKFN--SLLQQCLSIKQL---KQIHAQLLTNS 59

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG----YHRGGLPEEAL 157
           +    +  N+ +   ++      A   F  + +    S++ MIRG    +++  L   AL
Sbjct: 60  I----HKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSL---AL 112

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           E    M+F+ ++P+ +    +    +++  V+ G+  H  V+R   DE   V+   +LI 
Sbjct: 113 EFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVS--HSLIT 170

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY++CG +  A+++F+ ++Q  +VSW  MISGY +     E V LF EM+E    P+E++
Sbjct: 171 MYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMS 230

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++S++  CG +G L+LG W+  +++ N    +  M +AL+ MYGKC ++ SAR +FD MK
Sbjct: 231 LVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMK 290

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KD + WNA+I+ YAQ    ++A +LF  M++S   P+++T++G+LS C   GAL++GK 
Sbjct: 291 KKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQ 350

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +  Y  ++G + DV + TALVDMYAKCG ++ A+R+F     ++   WNAM++    HG 
Sbjct: 351 VEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQ 410

Query: 458 GEEALIFFVDMERSG--VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
            +EAL  F  M   G  V PN ITF+G+L+AC HAGLV EG+ +F  M    GLVPKIEH
Sbjct: 411 AQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEH 470

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y CMVDL  RAG L+EA + + +MP +P+ ++ GALL A +  KN  + E     +LE+E
Sbjct: 471 YSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELE 530

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
           P N G  V+ S +YA   RW+D A +R +MK+  V K PG S +++N  +H+F  G +++
Sbjct: 531 PSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLH 590



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 174/328 (53%), Gaps = 8/328 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NS+++ Y K      A+ ++  M + G + +  ++ ++L AC ++    LG  +  
Sbjct: 193 LVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEE 252

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F ++N +  + ++ +ALI MY +CG LVSAR +FD M  +D V+W+ MI GY + G+ EE
Sbjct: 253 FVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEE 312

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV-RNCKDEKLGVAIATA 214
           A+++ ++MR     P ++ +I ++S  A +  +DLGK +      R  +D+   V + TA
Sbjct: 313 AIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDD---VYVGTA 369

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE--NVF 272
           L+DMY+KCG+L  A ++F  + + + VSW  MIS      +  E + LF  M+ E   V 
Sbjct: 370 LVDMYAKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVS 429

Query: 273 PSEITILSLIIECGFVGGLQLGKWL-HAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
           P++IT + ++  C   G +  G+ L H      G    +   + +VD++ +   +  A  
Sbjct: 430 PNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWD 489

Query: 332 LFDGMKSK-DVMIWNAVISAYAQAHCID 358
               M  K D +I  A++ A  +   ID
Sbjct: 490 FVMTMPEKPDEVILGALLGACQKRKNID 517


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/591 (35%), Positives = 339/591 (57%), Gaps = 2/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y+KN    +A+ I+  MR +  + ++ T   +L  CA   M  LG ++HG A+
Sbjct: 127 WNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAV 186

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             GL+ D+ V+N L+ MYS+C  L +AR LFD  P  D+VSW+ +I GY + GL  EA  
Sbjct: 187 SCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEH 246

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R M    I+P  +   S +    ++  +   K IH  ++R+     L V + +ALID+
Sbjct: 247 LFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAV--VLDVFLKSALIDI 304

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC ++  A+++  + +    V  T MISGY+   +  E +  F  +++E + P+ +T 
Sbjct: 305 YFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTF 364

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S+      +  L LGK LH  I++   +    + +A++DMY KC  +  A  +F+ +  
Sbjct: 365 SSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITE 424

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN++I++ +Q     +A  LF  M +   R + V++ G LS C    AL  GK +
Sbjct: 425 KDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEI 484

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + K  L  D+  +++L+DMYAKCG++N + R+F     R+   WN++++ YG HG  
Sbjct: 485 HGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDL 544

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +E L  F +M R+G++P+ +TF+G+++AC HAG V EG   +  M    G+  ++EHY C
Sbjct: 545 KECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYAC 604

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           + D+ GRAG LDEA E I SMP  P+  VWG LL A  +H N  + E+A+  + +++P N
Sbjct: 605 VADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLN 664

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            GY VL++N+ A A +W  V  VR +MKE  V+K PG+S +EVN   H F+
Sbjct: 665 SGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFV 715



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 272/532 (51%), Gaps = 4/532 (0%)

Query: 29  YTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH 88
           YT  +   + +N ++  +    + + AL  Y  M   G   D +T P ++KAC  +    
Sbjct: 16  YTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVK 75

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           +GK +H      GL  D +V ++LI++Y+E G L  A+YLFD +P +D V W+ M+ GY 
Sbjct: 76  MGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYV 135

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           + G    A+++  EMR  +I+P+ V    ++S+ A  A +DLG  +H   V +C  E L 
Sbjct: 136 KNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAV-SCGLE-LD 193

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
             +A  L+ MYSKC  L  A++LF+   Q+ +VSW  +ISGY++   + E   LF  MI 
Sbjct: 194 SPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMIS 253

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
             + P  IT  S +     +  L+  K +H YI+R+     + + +AL+D+Y KCR++  
Sbjct: 254 AGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEM 313

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           A+ +     S D ++   +IS Y       +A E F  +   +++P  VT   +      
Sbjct: 314 AQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAG 373

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
             AL +GK LH  I K  L+    + +A++DMYAKCG ++ A R+F+    +D   WN+M
Sbjct: 374 LAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSM 433

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +     +G   EA+  F  M   G + + ++  G L+AC++   +  GK +   M+ G  
Sbjct: 434 ITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKG-P 492

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
           L   +     ++D+  + G L+ +  +   M  R N + W ++++A   H +
Sbjct: 493 LRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQER-NEVSWNSIISAYGNHGD 543



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 225/451 (49%), Gaps = 12/451 (2%)

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           MY   GSL  A+ LF  +      +W+ MIRG+   G    AL    +M    + P +  
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
              +V     +  V +GK +H  V  N    K  V + ++LI +Y++ G+L+ A+ LF+ 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETV--NLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDN 118

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           + Q   V W VM++GY++  +    +++F EM    + P+ +T   ++  C     L LG
Sbjct: 119 IPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG 178

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
             LH   +  G E    +AN L+ MY KC+ +++AR LFD     D++ WN +IS Y Q 
Sbjct: 179 TQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQN 238

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
             + +A  LF  M  + ++P+ +T    L    E  +L+  K +H YI +  + +DV LK
Sbjct: 239 GLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLK 298

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
           +AL+D+Y KC DV  A ++  ++   D  +   M++GY ++G  +EAL  F  + +  +K
Sbjct: 299 SALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMK 358

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE---HYG-CMVDLLGRAGLLD 530
           P  +TF  +  A +    +  GK      +HG  +  K++   H G  ++D+  + G LD
Sbjct: 359 PTSVTFSSIFPAFAGLAALNLGKE-----LHGSIIKTKLDEKCHVGSAILDMYAKCGRLD 413

Query: 531 EAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
            A  +   +  + + I W +++ +   +  P
Sbjct: 414 LACRVFNRITEK-DAICWNSMITSCSQNGRP 443


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 225/604 (37%), Positives = 358/604 (59%), Gaps = 20/604 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYA-FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +N +++ Y +    S  +  ++ FM  +G   D  T P++LKAC  V+    G +IH  A
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLA 176

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K G   D YV+ +LI +YS   ++ +AR LFDEMP RD+ SW+ MI GY + G  +EAL
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            +   +R MD     V ++S++S   +  D + G  IH+  +++  + +L V+    LID
Sbjct: 237 TLSNGLRAMD----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVS--NKLID 290

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE----GVRLFAEMIEENVFP 273
           +Y++ G L   +++F+R+    ++SW  +I  Y    E+NE     + LF EM    + P
Sbjct: 291 LYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY----ELNEQPLRAISLFQEMRLSRIQP 346

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTL 332
             +T++SL      +G ++  + +  + LR G F   + + NA+V MY K   + SAR +
Sbjct: 347 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 406

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELF-IHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           F+ + + DV+ WN +IS YAQ     +A E++ I  +  ++  N+ T V +L  C++AGA
Sbjct: 407 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 466

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L  G  LH  + K GL +DV + T+L DMY KCG +  A  LF +    +   WN ++A 
Sbjct: 467 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIAC 526

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           +G HG GE+A++ F +M   GVKP+ ITF+ LL+ACSH+GLV EG+  F+ M    G+ P
Sbjct: 527 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP 586

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
            ++HYGCMVD+ GRAG L+ A + IKSM L+P+  +WGALL+A ++H N  +G+IA+  +
Sbjct: 587 SLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHL 646

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            E+EP++ GY+VL+SN+YA A +W  V  +R +     ++K PG+SS+EV+  V  F  G
Sbjct: 647 FEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTG 706

Query: 632 GMVN 635
              +
Sbjct: 707 NQTH 710



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 263/534 (49%), Gaps = 30/534 (5%)

Query: 64  KNGSEVDNFT-IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSL 122
           KNG+E      + T+ + C  +      K +H   + +    +  +S  L+ +Y   G++
Sbjct: 46  KNGNESKEIDDVHTLFRYCTNL---QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNV 102

Query: 123 VSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE-MRFMDIRPSEVAMISMVSL 181
             AR+ FD + NRDV +W+ MI GY R G   E +      M    + P      S++  
Sbjct: 103 ALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA 162

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
              V D   G  IH      C   K G    V +A +LI +YS+   +  A+ LF+ +  
Sbjct: 163 CRTVID---GNKIH------CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPV 213

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
             + SW  MISGY +     E + L   +   +     +T++SL+  C   G    G  +
Sbjct: 214 RDMGSWNAMISGYCQSGNAKEALTLSNGLRAMD----SVTVVSLLSACTEAGDFNRGVTI 269

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           H+Y +++G E  L ++N L+D+Y +   +R  + +FD M  +D++ WN++I AY      
Sbjct: 270 HSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQP 329

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG--LEVDVILKT 415
            +A  LF  M++S+++P+ +T++ L S+ ++ G +   + +  +  ++G  LE D+ +  
Sbjct: 330 LRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE-DITIGN 388

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG-VK 474
           A+V MYAK G V+ A  +F+     D+  WN +++GY  +G   EA+  +  ME  G + 
Sbjct: 389 AVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIA 448

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
            N  T++ +L ACS AG + +G  +  +++   GL   +     + D+ G+ G L++A  
Sbjct: 449 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALS 507

Query: 535 MIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMS 586
           +   +P R N + W  L+A    H +     +   ++L+  ++P +  +  L+S
Sbjct: 508 LFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560


>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Cucumis sativus]
          Length = 619

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 218/600 (36%), Positives = 348/600 (58%), Gaps = 25/600 (4%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           L++ Y+   KP S  N         +  D F   ++L+ C  +      K+IH   + N 
Sbjct: 10  LISRYLNLQKPHSKPN-----PNRQALSDKFN--SLLQQCLSIKQL---KQIHAQLLTNS 59

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG----YHRGGLPEEAL 157
           +    +  N+ +   ++      A   F  + +    S++ MIRG    +++  L   AL
Sbjct: 60  I----HKPNSFLYKIADLKDFAYASVFFSNILDPTEYSFNVMIRGLSTAWNKSSL---AL 112

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           E    M+F+ ++P+ +    +    +++  V+ G+  H  V+R   DE   V+   +LI 
Sbjct: 113 EFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLDEDGHVS--HSLIT 170

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY++CG +  A+++F+ ++Q  +VSW  MISGY +     E V LF EM+E    P+E++
Sbjct: 171 MYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMS 230

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++S++  CG +G L+LG W+  +++ N    +  M +AL+ MYGKC ++ SAR +FD MK
Sbjct: 231 LVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMK 290

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KD + WNA+I+ YAQ    ++A +LF  M++S   P+++T++G+LS C   GAL++GK 
Sbjct: 291 KKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQ 350

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +  Y  ++G + DV + TALVDMYAKCG ++ A+R+F     ++   WNAM++    HG 
Sbjct: 351 VEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQ 410

Query: 458 GEEALIFFVDMERSG--VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
            +EAL  F  M   G  V PN ITF+G+L+AC HAGLV EG+ +F  M    GLVPKIEH
Sbjct: 411 AQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEH 470

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y CMVDL  RAG L+EA + + +MP +P+ ++ GALL A +  KN  + E     +LE+E
Sbjct: 471 YSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDISERVMKLLLELE 530

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
           P N G  V+ S +YA   RW+D A +R +MK+  V K PG S +++N  +H+F  G +++
Sbjct: 531 PSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQLHEFHAGDVLH 590



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 173/328 (52%), Gaps = 8/328 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NS+++ Y K      A+ ++  M + G + +  ++ ++L AC ++    LG  +  
Sbjct: 193 LVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELGDLKLGTWVEE 252

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F ++N +  + ++ +ALI MY +CG LVSAR +FD M  +D V+W+ MI GY + G+ EE
Sbjct: 253 FVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEE 312

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV-RNCKDEKLGVAIATA 214
           A+++ ++MR     P ++ +I ++S  A +  +DLGK +      R  +D+   V + TA
Sbjct: 313 AIKLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDD---VYVGTA 369

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE--NVF 272
           L+DMY+KCG+L  A ++F  +   + VSW  MIS      +  E + LF  M+ E   V 
Sbjct: 370 LVDMYAKCGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQEALALFKSMMNEGGTVS 429

Query: 273 PSEITILSLIIECGFVGGLQLGKWL-HAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
           P++IT + ++  C   G +  G+ L H      G    +   + +VD++ +   +  A  
Sbjct: 430 PNDITFVGVLSACVHAGLVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWD 489

Query: 332 LFDGMKSK-DVMIWNAVISAYAQAHCID 358
               M  K D +I  A++ A  +   ID
Sbjct: 490 FVMTMPEKPDEVILGALLGACQKRKNID 517


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 210/592 (35%), Positives = 334/592 (56%), Gaps = 3/592 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+++  Y +       L ++  M   G   D  T   +L A     M   GK IH   +
Sbjct: 197 YNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTV 256

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + GL+ D  V  AL+ M   CG + SA+  F  + +RDVV ++ +I    + G   EA E
Sbjct: 257 EEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFE 316

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
               MR   +  +    +S+++  +    ++ GK IH+ +  +       V I  ALI M
Sbjct: 317 QYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSD--VQIGNALISM 374

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y++CG+L  A++LF  + +  ++SW  +I+GY R  +  E +RL+ +M  E V P  +T 
Sbjct: 375 YARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTF 434

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           L L+  C        GK +H  ILR+G + +  +ANAL++MY +C  +  A+ +F+G ++
Sbjct: 435 LHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQA 494

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +DV+ WN++I+ +AQ    + A++LF  M+  ++ P+ +T   +LS C    ALE+GK +
Sbjct: 495 RDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQI 554

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I + GL++DV L  AL++MY +CG +  A  +F    +RD+  W AM+ G    G  
Sbjct: 555 HGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGED 614

Query: 459 EEALIFFVDMERSGVK-PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            +A+  F  M+  G + P+G TF  +L+AC+HAGLV EG  +F  M    G++P IEHYG
Sbjct: 615 MKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYG 674

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           C+V LLGRA    EA  +I  MP  P+  VW  LL A ++H N ++ E AA   L++  +
Sbjct: 675 CLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNAR 734

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           N    +L+SN+YA A RW+DVA +RRVM+   ++KEPG S +EV+ ++H+FI
Sbjct: 735 NPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFI 786



 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 157/522 (30%), Positives = 281/522 (53%), Gaps = 6/522 (1%)

Query: 67  SEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSAR 126
           +E D  T   +L+ C +  +    K IH   ++ G+  D ++SN LI MY +C S++ A 
Sbjct: 23  TETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAH 82

Query: 127 YLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            +F EMP RDV+SW+++I  Y + G  ++A ++  EM+     P+++  IS+++     A
Sbjct: 83  QVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPA 142

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
           +++ GK IH+ +++     +    +  +L+ MY KCG+L  A+Q+F  ++   VVS+  M
Sbjct: 143 ELENGKKIHSQIIK--AGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTM 200

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           +  Y +   + E + LF +M  E + P ++T ++L+        L  GK +H   +  G 
Sbjct: 201 LGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGL 260

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
              + +  ALV M  +C ++ SA+  F G+  +DV+++NA+I+A AQ     +AFE +  
Sbjct: 261 NSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYR 320

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           M+   V  N  T + +L+ C+ + ALE GK +H++I + G   DV +  AL+ MYA+CGD
Sbjct: 321 MRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGD 380

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           +  A  LF     RD+  WNA++AGY       EA+  +  M+  GVKP  +TF+ LL+A
Sbjct: 381 LPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSA 440

Query: 487 CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
           C+++    +GK + + ++   G+         ++++  R G L EA  + +    R ++I
Sbjct: 441 CANSSAYADGKMIHEDILRS-GIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR-DVI 498

Query: 547 VWGALLAASKLHKN--PSMGEIAATQILEIEPQNYGYNVLMS 586
            W +++A    H +   +       Q  E+EP N  +  ++S
Sbjct: 499 SWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLS 540



 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 154/514 (29%), Positives = 261/514 (50%), Gaps = 4/514 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL++ Y +      A  ++  M+  G   +  T  +IL AC        GK+IH   I
Sbjct: 96  WNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQII 155

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   D  V N+L+ MY +CG L  AR +F  +  RDVVS++TM+  Y +    +E L 
Sbjct: 156 KAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLG 215

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M    I P +V  I+++  F   + +D GK IH   V    +    + + TAL+ M
Sbjct: 216 LFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSD--IRVGTALVTM 273

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
             +CG++  AKQ F  +    VV +  +I+   +     E    +  M  + V  +  T 
Sbjct: 274 CVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTY 333

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           LS++  C     L+ GK +H++I  +G    + + NAL+ MY +C ++  AR LF  M  
Sbjct: 334 LSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPK 393

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +D++ WNA+I+ YA+     +A  L+  M+   V+P  VT + LLS C  + A   GK +
Sbjct: 394 RDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMI 453

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I + G++ +  L  AL++MY +CG +  A  +F     RD+  WN+M+AG+  HG  
Sbjct: 454 HEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSY 513

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           E A   F +M+   ++P+ ITF  +L+ C +   +  GK +  ++    GL   +     
Sbjct: 514 ETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES-GLQLDVNLGNA 572

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           ++++  R G L +A  +  S+  R +++ W A++
Sbjct: 573 LINMYIRCGSLQDARNVFHSLQHR-DVMSWTAMI 605



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 164/325 (50%), Gaps = 5/325 (1%)

Query: 29  YTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH 88
           YT     L  +N+++  Y +      A+ +Y  M+  G +    T   +L ACA      
Sbjct: 389 YTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYA 448

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
            GK IH   +++G+  + +++NAL+ MY  CGSL+ A+ +F+    RDV+SW++MI G+ 
Sbjct: 449 DGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHA 508

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           + G  E A ++ +EM+  ++ P  +   S++S   +   ++LGK IH  +  +    +L 
Sbjct: 509 QHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES--GLQLD 566

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V +  ALI+MY +CG+L  A+ +F+ L    V+SWT MI G     E  + + LF +M  
Sbjct: 567 VNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQN 626

Query: 269 ENVFPSE-ITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREI 326
           E   P +  T  S++  C   G +  G  + + +    G   ++     LV + G+ R  
Sbjct: 627 EGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRF 686

Query: 327 RSARTLFDGMK-SKDVMIWNAVISA 350
           + A TL + M    D  +W  ++ A
Sbjct: 687 QEAETLINQMPFPPDAAVWETLLGA 711


>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
          Length = 669

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 217/587 (36%), Positives = 344/587 (58%), Gaps = 7/587 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL---GKEIHG 95
           +N ++  Y     P  AL ++  MR+ G   DN+T+  ++ A A          G  IH 
Sbjct: 86  WNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHA 145

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              + G   D +V + L+  Y    S+  A  +F+EM  RDVVSW++MI    + G  ++
Sbjct: 146 LVRRIGFTSDVFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACAQCGHWDK 205

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            L+++ EM+   I P++V +IS++S       VD G+ ++  V +   +    V I  AL
Sbjct: 206 VLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEAD--VDIRNAL 263

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I MY+KCG L+ A + F  +      SW  +I G+++ +E  E +R+F EM+   V P  
Sbjct: 264 ISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDG 323

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           IT++S++  C  +G L+ G  +H+YI  NG      + N+L++MY KC ++ +A  +F  
Sbjct: 324 ITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQT 383

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M  KDV+ W  ++  Y + H    AF LF  MK+++V  +E+ +V LLS C++ GAL+ G
Sbjct: 384 MTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKG 443

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H+YIE+  +  D+ L++ALVDMYAKCG ++ A  +F +  ++    WNAM+ G   +
Sbjct: 444 REIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASN 503

Query: 456 GCGEEALIFFVDM-ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           G G+EA+  F  M E    KP+GIT   +L AC+H G+V EG   F  ++  LG+VP  E
Sbjct: 504 GYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYF-YLMSSLGVVPDTE 562

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HYGC+VDLLGRAG+LDEA   IK MP+ PN ++WG+LLAA ++H    +G++    I+ +
Sbjct: 563 HYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNV 622

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
            P + G +VL+SN++A  ++W+DV  VR +M    ++K PG SSV+V
Sbjct: 623 APNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSVQV 669



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 244/481 (50%), Gaps = 13/481 (2%)

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY---LFDEMPN 134
           L ACA     HL  E+HG  ++  L  D++V+  LI + +   +    RY   +FD M  
Sbjct: 24  LDACAS--RAHLA-ELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQ 80

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL---G 191
            +   W+ MIRGY     P +AL V REMR   + P    M ++VS  A  A +     G
Sbjct: 81  PNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNG 140

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
            AIHA V R        V + + L++ Y    ++  A ++F  + +  VVSWT MIS   
Sbjct: 141 DAIHALVRRIGFTSD--VFVMSGLVNYYGAFRSVKEASKVFEEMYERDVVSWTSMISACA 198

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +C   ++ +++ +EM  E + P+++TI+SL+  CG    +  G+W++  + + G E  + 
Sbjct: 199 QCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVD 258

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           + NAL+ MY KC  +  A   F  M ++    WN +I  + Q H   +A  +F  M +  
Sbjct: 259 IRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHG 318

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           V P+ +T+V +LS C + G L  G  +H+YI+  G+  D IL  +L++MYAKCGD+  A 
Sbjct: 319 VTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAE 378

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
           R+F     +D+  W  M+ GY        A   F +M+ + V  + +  + LL+ACS  G
Sbjct: 379 RVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLG 438

Query: 492 LVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
            + +G+ +    +  + +   +     +VD+  + G +D A E+ + M  +  +  W A+
Sbjct: 439 ALDKGREIH-SYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTL-SWNAM 496

Query: 552 L 552
           +
Sbjct: 497 I 497


>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
 gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 677

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 212/596 (35%), Positives = 337/596 (56%), Gaps = 12/596 (2%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLGK 91
           + L  YN ++  Y++      A++++  M   G +   D +T P + KA  ++    LG 
Sbjct: 78  SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            +HG  +++    D YV NAL+ MY   G +  AR +FD M NRDV+SW+TMI GY+R G
Sbjct: 138 VVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNG 197

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--V 209
              +AL +   M    +      ++SM+ +   + D+++G+ +H  V    ++++LG  +
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV----EEKRLGDKI 253

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            +  AL++MY KCG +  A+ +F+R+ +  V++WT MI+GY    ++   + L   M  E
Sbjct: 254 EVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFE 313

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            V P+ +TI SL+  CG    +  GK LH + +R      + +  +L+ MY KC+ +   
Sbjct: 314 GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLC 373

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             +F G        W+A+I+   Q   +  A  LF  M+   V PN  T+  LL      
Sbjct: 374 FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAAL 433

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS----EAIYRDICMW 445
             L     +H Y+ K G    +   T LV +Y+KCG +  A+++F+    +   +D+ +W
Sbjct: 434 ADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLW 493

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
            A+++GYGMHG G  AL  F++M RSGV PN ITF   LNACSH+GLV EG ++F  M+ 
Sbjct: 494 GALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLE 553

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
               + +  HY C+VDLLGRAG LDEA+ +I ++P  P   VWGALLAA   H+N  +GE
Sbjct: 554 HYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGE 613

Query: 566 IAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
           +AA ++ E+EP+N G  VL++NIYA   RW D+  VR +M+ + ++K+PG S++E+
Sbjct: 614 MAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 247/475 (52%), Gaps = 13/475 (2%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           K +H   I  G     ++ + L   Y+ CG +  AR LF+EMP   ++S++ +IR Y R 
Sbjct: 35  KALHCHVITGG-RVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVRE 93

Query: 151 GLPEEALEVMREMRFMDIR--PSEVAMISMVSLFADVADVDLGKAIHACVVRNC--KDEK 206
           GL  +A+ V   M    ++  P       +     ++  + LG  +H  ++R+   +D+ 
Sbjct: 94  GLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDK- 152

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
               +  AL+ MY   G +  A+ +F+ +    V+SW  MISGY R   +N+ + +F  M
Sbjct: 153 ---YVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM 209

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
           + E+V     TI+S++  CG +  L++G+ +H  +        + + NALV+MY KC  +
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             AR +FD M+ +DV+ W  +I+ Y +   ++ A EL   M+   VRPN VT+  L+S+C
Sbjct: 270 DEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVC 329

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
            +A  +  GK LH +  +Q +  D+I++T+L+ MYAKC  V+  +R+FS A       W+
Sbjct: 330 GDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWS 389

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           A++AG   +    +AL  F  M R  V+PN  T   LL A +    + +  ++   +   
Sbjct: 390 AIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTK- 448

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEM---IKSMPLRPNMIVWGALLAASKLH 558
            G +  ++    +V +  + G L+ AH++   I+      ++++WGAL++   +H
Sbjct: 449 TGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 171/323 (52%), Gaps = 5/323 (1%)

Query: 177 SMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLN 236
           S+++ FA    +   KA+H  V+      ++   I + L   Y+ CG++ YA++LF  + 
Sbjct: 20  SLLNHFAATQSISKTKALHCHVITG---GRVSGHILSTLSVTYALCGHITYARKLFEEMP 76

Query: 237 QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV--FPSEITILSLIIECGFVGGLQLG 294
           Q+S++S+ ++I  Y+R    ++ + +F  M+ E V   P   T   +    G +  ++LG
Sbjct: 77  QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
             +H  ILR+ F     + NAL+ MY    ++  AR +FD MK++DV+ WN +IS Y + 
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
             ++ A  +F  M    V  +  T+V +L +C     LEMG+ +H  +E++ L   + +K
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK 256

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
            ALV+MY KCG ++ A  +F     RD+  W  M+ GY   G  E AL     M+  GV+
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316

Query: 475 PNGITFIGLLNACSHAGLVTEGK 497
           PN +T   L++ C  A  V +GK
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGK 339


>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
          Length = 669

 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 217/587 (36%), Positives = 344/587 (58%), Gaps = 7/587 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL---GKEIHG 95
           +N ++  Y     P  AL ++  MR+ G   DN+T+  ++ A A          G  IH 
Sbjct: 86  WNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHA 145

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              + G   D +V + L+  Y    S+  A  +F+EM  RDVVSW++MI    + G  ++
Sbjct: 146 LVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACAQCGHWDK 205

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            L+++ EM+   I P++V +IS++S       VD G+ ++  V +   +    V I  AL
Sbjct: 206 VLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEAD--VDIRNAL 263

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I MY+KCG L+ A + F  +      SW  +I G+++ +E  E +R+F EM+   V P  
Sbjct: 264 ISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHGVTPDG 323

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           IT++S++  C  +G L+ G  +H+YI  NG      + N+L++MY KC ++ +A  +F  
Sbjct: 324 ITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQT 383

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M  KDV+ W  ++  Y + H    AF LF  MK+++V  +E+ +V LLS C++ GAL+ G
Sbjct: 384 MTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKG 443

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H+YIE+  +  D+ L++ALVDMYAKCG ++ A  +F +  ++    WNAM+ G   +
Sbjct: 444 REIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASN 503

Query: 456 GCGEEALIFFVDM-ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           G G+EA+  F  M E    KP+GIT   +L AC+H G+V EG   F  ++  LG+VP  E
Sbjct: 504 GYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMVDEGLRYF-YLMSSLGVVPDTE 562

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HYGC+VDLLGRAG+LDEA   IK MP+ PN ++WG+LLAA ++H    +G++    I+ +
Sbjct: 563 HYGCIVDLLGRAGMLDEAFHFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNV 622

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
            P + G +VL+SN++A  ++W+DV  VR +M    ++K PG SSV+V
Sbjct: 623 APNDVGVHVLVSNLHAEESQWDDVEHVRGLMGSRGIEKTPGHSSVQV 669



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 145/481 (30%), Positives = 244/481 (50%), Gaps = 13/481 (2%)

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY---LFDEMPN 134
           L ACA     HL  E+HG  ++  L  D++V+  LI + +   +    RY   +FD M  
Sbjct: 24  LDACAS--RAHLA-ELHGRLVRAHLTSDSFVAGRLIALLASPAARHDMRYARKVFDGMAQ 80

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL---G 191
            +   W+ MIRGY     P +AL V REMR   + P    M ++VS  A  A +     G
Sbjct: 81  PNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNG 140

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
            AIHA V R        V + + L++ Y    ++  A ++F  + +  VVSWT MIS   
Sbjct: 141 DAIHALVRRIGFTSD--VFVMSGLVNYYGAFRSVEEASKVFEEMYERDVVSWTSMISACA 198

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +C   ++ +++ +EM  E + P+++TI+SL+  CG    +  G+W++  + + G E  + 
Sbjct: 199 QCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVD 258

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           + NAL+ MY KC  +  A   F  M ++    WN +I  + Q H   +A  +F  M +  
Sbjct: 259 IRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEMLLHG 318

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           V P+ +T+V +LS C + G L  G  +H+YI+  G+  D IL  +L++MYAKCGD+  A 
Sbjct: 319 VTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMAAAE 378

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
           R+F     +D+  W  M+ GY        A   F +M+ + V  + +  + LL+ACS  G
Sbjct: 379 RVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLG 438

Query: 492 LVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
            + +G+ +    +  + +   +     +VD+  + G +D A E+ + M  +  +  W A+
Sbjct: 439 ALDKGREIH-SYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIFRKMQHKQTL-SWNAM 496

Query: 552 L 552
           +
Sbjct: 497 I 497


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 216/609 (35%), Positives = 342/609 (56%), Gaps = 13/609 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+  Y +  + S A+ +++ ++  G E++ F   T+LK         LG  +H    
Sbjct: 113 FVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVY 172

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G D DA+V  ALI  YS CG    AR +FD +  +D+VSW+ M+  Y      EE+L+
Sbjct: 173 KLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLK 232

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   MR +  +P+     S++     +   ++GKA+H C  +    E+L V +   LID+
Sbjct: 233 LFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVE--LIDL 290

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y K G++  A Q+F  + ++ V+ W+ MI+ Y +  +  E + +F  M    V P++ T+
Sbjct: 291 YIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTL 350

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            SL+  C  +  LQLG  +H ++++ G + ++ ++NAL+DMY KC  + ++  LF    +
Sbjct: 351 ASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPN 410

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
              + WN VI  Y QA   +KA  LF  M   +V+  EVT   +L  C    ALE G  +
Sbjct: 411 CTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQI 470

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H+   K   + + ++  AL+DMYAKCG++  A  +F      D   WNAM++GY +HG  
Sbjct: 471 HSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLY 530

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F  M  +  KP+ +TF+G+L+ACS+AGL+  G++ F  MV    + P  EHY C
Sbjct: 531 GEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTC 590

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MV LLGR+G LD+A +++  +P  P+++VW ALL+A  +H +  +G I+A ++LEIEP++
Sbjct: 591 MVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPED 650

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG------- 631
              +VL+SNIYA A RW +VA +R  MK   ++KEPG S +E  G VH F  G       
Sbjct: 651 EATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDT 710

Query: 632 ----GMVNW 636
               GM+ W
Sbjct: 711 KLINGMLEW 719



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 235/422 (55%), Gaps = 4/422 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +  +V  Y++N     +L +++ MR  G + +NFT  ++LKAC  + + ++GK +HG
Sbjct: 211 MVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHG 270

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A K     + +V   LI +Y + G +  A  +F+EMP  DV+ WS MI  Y +    EE
Sbjct: 271 CAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEE 330

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+E+   MR   + P++  + S++   A + D+ LG  IH  VV+   D  + V ++ AL
Sbjct: 331 AIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHCHVVKVGLD--MNVFVSNAL 388

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+KCG +  + QLF+     + VSW  +I GY++     + + LF +M+E  V  +E
Sbjct: 389 MDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTE 448

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T  S++  C  +  L+ G  +H+  ++  ++ +  + NAL+DMY KC  I+ AR +FD 
Sbjct: 449 VTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDM 508

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++  D + WNA+IS Y+      +A + F  M  ++ +P++VT VG+LS C+ AG L+ G
Sbjct: 509 LREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRG 568

Query: 396 K-WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYG 453
           + +  + +E+  +E      T +V +  + G ++ A +L  E  +   + +W A+++   
Sbjct: 569 QAYFKSMVEEYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACV 628

Query: 454 MH 455
           +H
Sbjct: 629 IH 630



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 150/527 (28%), Positives = 263/527 (49%), Gaps = 26/527 (4%)

Query: 45  SYIKNNKPSSALNIYAFMRKNGS----EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
           ++ K+N     +   +F+ +  S    E + +   ++L++C +      GK +H   IK 
Sbjct: 14  NHCKSNTALCIITQRSFLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGKYLHCEIIKK 73

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G   D + +N L+  Y +  SL  A  LFDEMP+R+ VS+ T+I+GY +     EA+ + 
Sbjct: 74  GNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLF 133

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
             ++      +     +++ L        LG ++HACV +   D      + TALID YS
Sbjct: 134 SRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLGFDSD--AFVGTALIDCYS 191

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
            CG    A+Q+F+ +    +VSWT M++ Y+      E ++LF+ M      P+  T  S
Sbjct: 192 VCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFAS 251

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           ++  C  +    +GK +H    +  +   L +   L+D+Y K  ++  A  +F+ M   D
Sbjct: 252 VLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDD 311

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           V+ W+ +I+ YAQ+   ++A E+F  M+   V PN+ T+  LL  C     L++G  +H 
Sbjct: 312 VIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVDLQLGNQIHC 371

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
           ++ K GL+++V +  AL+DMYAKCG +  + +LFSE+       WN ++ GY   G GE+
Sbjct: 372 HVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVGYVQAGNGEK 431

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG--------KSVFDK-MVHGLGLVP 511
           ALI F DM    V+   +T+  +L AC+    +  G        K+++DK  V G  L  
Sbjct: 432 ALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVKTIYDKNTVVGNAL-- 489

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
                   +D+  + G + +A  ++  M    + + W A+++   +H
Sbjct: 490 --------IDMYAKCGNIKDA-RLVFDMLREHDQVSWNAMISGYSVH 527


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 224/596 (37%), Positives = 356/596 (59%), Gaps = 9/596 (1%)

Query: 39  YNSLVTSYIKNNKPSSALN-IYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +NS++++Y++N     A++  Y  +     + D +T P +LKAC Q L+   G++IH + 
Sbjct: 142 WNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKAC-QTLVD--GRKIHCWV 198

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
            K G   D +V+ +LI MYS  G +  AR LFD+MP RD+ SW+ MI G  + G   +AL
Sbjct: 199 FKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 258

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           +V+ EMR   I    V + S++ + A + D+     IH  V+++  + +L V+   ALI+
Sbjct: 259 DVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVS--NALIN 316

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+K GNL  A+++F ++    VVSW  +I+ Y + ++       F +M    + P  +T
Sbjct: 317 MYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLT 376

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEF-SLAMANALVDMYGKCREIRSARTLFDGM 336
           ++SL          +  + +H +I+R G+   ++ + NA++DMY K   I SA  +F+ +
Sbjct: 377 LVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLI 436

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMK-VSKVRPNEVTMVGLLSLCTEAGALEMG 395
             KDV+ WN +IS Y Q     +A E++  M+   +++ N+ T V +L+     GAL+ G
Sbjct: 437 PVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQG 496

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H ++ K  L +DV + T L+D+Y KCG +  A  LF +        WNA+++ +G+H
Sbjct: 497 MRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIH 556

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G GE+AL  F +M+  GVKP+ +TFI LL+ACSH+GLV EGK  F  ++   G+ P ++H
Sbjct: 557 GHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFF-HLMQEYGIKPSLKH 615

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           YGCMVDLLGRAG L+ A++ IK MPL P+  +WGALL A ++H N  +G+ A+ ++ E++
Sbjct: 616 YGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVD 675

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            +N GY VL+SNIYA   +W  V  VR + +E  +KK PG+SS+EVN  V  F  G
Sbjct: 676 SENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSSIEVNRRVDIFYTG 731



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 271/523 (51%), Gaps = 22/523 (4%)

Query: 61  FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECG 120
           F  +  ++ +     ++  +C + L   L K +H   + +G     ++S  L+ +Y+  G
Sbjct: 66  FHWRQPAKNEEIDFNSLFDSCTKTL---LAKRLHALLVVSGKIQSNFISIRLVNLYASLG 122

Query: 121 SLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
            +  +R  FD++  +DV +W++MI  Y R G   EA++   ++  +    ++      V 
Sbjct: 123 DVSLSRGTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPV- 181

Query: 181 LFADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLN 236
           L A    VD G+ IH  V       KLG    V +A +LI MYS+ G +  A+ LF+ + 
Sbjct: 182 LKACQTLVD-GRKIHCWVF------KLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMP 234

Query: 237 QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
              + SW  MISG I+     + + +  EM  E +    +T+ S++  C  +G +     
Sbjct: 235 FRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATL 294

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           +H Y++++G EF L ++NAL++MY K   +  A+ +F  M  +DV+ WN++I+AY Q   
Sbjct: 295 IHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDD 354

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD-VILKT 415
              A   F  M+++ + P+ +T+V L S+  ++   +  + +H +I ++G  ++ V++  
Sbjct: 355 PVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGN 414

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER-SGVK 474
           A++DMYAK G ++ A+++F+    +D+  WN +++GY  +G   EA+  +  ME    +K
Sbjct: 415 AVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIK 474

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
            N  T++ +L A +H G + +G  +   ++    L   +    C++DL G+ G L +A  
Sbjct: 475 LNQGTWVSILAAYAHVGALQQGMRIHGHLIK-TNLHLDVFVGTCLIDLYGKCGRLVDAMC 533

Query: 535 MIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           +   +P R + + W A+++   +H +   GE A     E++ +
Sbjct: 534 LFYQVP-RESSVPWNAIISCHGIHGH---GEKALKLFREMQDE 572



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 169/322 (52%), Gaps = 5/322 (1%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
            +  +  +NS++ +Y +N+ P +A   +  M+ NG E D  T+ ++    AQ       +
Sbjct: 335 FLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSR 394

Query: 92  EIHGFAIKNGLDGDAYV-SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
            +HGF ++ G   +A V  NA++ MY++ G + SA  +F+ +P +DVVSW+T+I GY + 
Sbjct: 395 SVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQN 454

Query: 151 GLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
           GL  EA+EV R M    +I+ ++   +S+++ +A V  +  G  IH  +++   +  L V
Sbjct: 455 GLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKT--NLHLDV 512

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            + T LID+Y KCG L  A  LF ++ + S V W  +IS +       + ++LF EM +E
Sbjct: 513 FVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDE 572

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            V P  +T +SL+  C   G +  GKW    +   G + SL     +VD+ G+   +  A
Sbjct: 573 GVKPDHVTFISLLSACSHSGLVDEGKWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMA 632

Query: 330 RTLFDGMK-SKDVMIWNAVISA 350
                 M    D  IW A++ A
Sbjct: 633 YDFIKDMPLHPDASIWGALLGA 654


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 209/593 (35%), Positives = 346/593 (58%), Gaps = 3/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L++ Y K      ++ ++  M++ G   D++T   +LK  A        K +HG+ +
Sbjct: 126 WNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVL 185

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G      V N+LI  Y +CG + SAR LFDE+ +RDVVSW++MI G    G     LE
Sbjct: 186 KLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTMNGFSRNGLE 245

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
              +M  + +      +++++   A+V ++ LG+A+HA  V+       GV     L+DM
Sbjct: 246 FFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVK--AGFSGGVMFNNTLLDM 303

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSKCGNL  A ++F ++ + ++VSWT +I+ ++R     E + LF EM  + + P    +
Sbjct: 304 YSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAV 363

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C     L  G+ +H +I +N    +L ++NAL++MY KC  +  A  +F  +  
Sbjct: 364 TSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPV 423

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K+++ WN +I  Y+Q    ++A +LF+ M+  +++P++VTM  +L  C    ALE G+ +
Sbjct: 424 KNIVSWNTMIGGYSQNSLPNEALQLFLDMQ-KQLKPDDVTMACVLPACAGLAALEKGREI 482

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H +I ++G   D+ +  ALVDMY KCG +  A +LF     +D+ +W  M+AGYGMHG G
Sbjct: 483 HGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFG 542

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +EA+  F  M  +G++P   +F  +L AC+H+GL+ EG  +FD M     + PK+EHY C
Sbjct: 543 KEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYAC 602

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLL R+G L  A++ I++MP++P+  +WGALL+  ++H +  + E  A  I E+EP+N
Sbjct: 603 MVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDVELAEKVAEHIFELEPEN 662

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             Y VL++N+YA A +W +V  ++R + +  +K + G S +EV G  + F  G
Sbjct: 663 TRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEVQGKFNIFFAG 715



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 150/530 (28%), Positives = 269/530 (50%), Gaps = 17/530 (3%)

Query: 63  RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSL 122
           R   SE++  T  ++L+ CA++     GK +H     NG+  D  +   L+ MY  CG L
Sbjct: 49  RSQRSELELNTYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDL 108

Query: 123 VSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLF 182
           V  R +FD + N  +  W+ ++  Y + G   E++ +  +M+ + IR        ++  F
Sbjct: 109 VKGRRIFDGILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGF 168

Query: 183 ADVADVDLGKAIHACVVRNCKDEKLGV----AIATALIDMYSKCGNLAYAKQLFNRLNQN 238
           A  A V   K +H  V+      KLG     A+  +LI  Y KCG +  A+ LF+ L+  
Sbjct: 169 AASAKVRECKRVHGYVL------KLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDR 222

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
            VVSW  MISG         G+  F +M+   V     T++++++ C  VG L LG+ LH
Sbjct: 223 DVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALH 282

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
           AY ++ GF   +   N L+DMY KC  +  A  +F  M    ++ W ++I+A+ +     
Sbjct: 283 AYGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHY 342

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALV 418
           +A  LF  M+   +RP+   +  ++  C  + +L+ G+ +H +I+K  +  ++ +  AL+
Sbjct: 343 EAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALM 402

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           +MYAKCG +  A  +FS+   ++I  WN M+ GY  +    EAL  F+DM++  +KP+ +
Sbjct: 403 NMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQ-LKPDDV 461

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC-MVDLLGRAGLLDEAHEMIK 537
           T   +L AC+    + +G+ +   ++   G    + H  C +VD+  + GLL  A ++  
Sbjct: 462 TMACVLPACAGLAALEKGREIHGHILRK-GYFSDL-HVACALVDMYVKCGLLVLAQQLFD 519

Query: 538 SMPLRPNMIVWGALLAASKLH--KNPSMGEIAATQILEIEPQNYGYNVLM 585
            +P + +MI+W  ++A   +H     ++      ++  IEP+   +  ++
Sbjct: 520 MIP-KKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSIL 568



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 194/378 (51%), Gaps = 8/378 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + S++ ++++      A+ ++  M+  G   D + + +++ ACA       G+E+H 
Sbjct: 325 IVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHN 384

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              KN +  +  VSNAL+ MY++CGS+  A  +F ++P +++VSW+TMI GY +  LP E
Sbjct: 385 HIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNE 444

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL++  +M+   ++P +V M  ++   A +A ++ G+ IH  ++R  K     + +A AL
Sbjct: 445 ALQLFLDMQ-KQLKPDDVTMACVLPACAGLAALEKGREIHGHILR--KGYFSDLHVACAL 501

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY KCG L  A+QLF+ + +  ++ WTVMI+GY       E +  F +M    + P E
Sbjct: 502 VDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEE 561

Query: 276 ITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            +  S++  C   G L+ G K   +       E  L     +VD+  +   +  A    +
Sbjct: 562 SSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIE 621

Query: 335 GMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP-NEVTMVGLLSLCTEAGAL 392
            M  K D  IW A++S     H ++ A ++  H  + ++ P N    V L ++  EA   
Sbjct: 622 TMPIKPDAAIWGALLSGCRIHHDVELAEKVAEH--IFELEPENTRYYVLLANVYAEAEKW 679

Query: 393 EMGKWLHTYIEKQGLEVD 410
           E  K +   I K GL+ D
Sbjct: 680 EEVKKIQRRISKGGLKND 697


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/593 (35%), Positives = 343/593 (57%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YNSL++  ++      AL ++  M+++  + D  T+ ++L ACA V   H G ++H  AI
Sbjct: 330 YNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAI 389

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+  D  +  +L+ +YS+C  + +A   F      ++V W+ M+  Y +     ++ E
Sbjct: 390 KAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFE 449

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R+M+   + P++    S++     +  + LG+ IH  V++     +L V + + LIDM
Sbjct: 450 IFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT--GFQLNVYVCSVLIDM 507

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G LA A ++  RL ++ VVSWT MI+GY++ +  +E ++LF EM    +    I  
Sbjct: 508 YAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGF 567

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S I  C  +  L+ G+ +HA     GF   L++ NAL+ +Y +C  I+ A   F+ +  
Sbjct: 568 ASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGD 627

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K+ + WN+++S  AQ+   ++A ++F+ M  ++   N  T    +S       ++ G+ +
Sbjct: 628 KNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQI 687

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H+ + K G + +  +  +L+ +YAK G ++ A+R F++   R++  WNAM+ GY  HGCG
Sbjct: 688 HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCG 747

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F +M+  G+ PN +TF+G+L+ACSH GLV EG   F+ M     LVPK EHY C
Sbjct: 748 MEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVC 807

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VDLLGRAG LD A E IK MP+  + ++W  LL+A  +HKN  +GE AA  +LE+EP++
Sbjct: 808 VVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPED 867

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VL+SNIYAV+ +W      R++MK+  VKKEPG S +EV   VH F  G
Sbjct: 868 SATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVHAFYAG 920



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 140/518 (27%), Positives = 270/518 (52%), Gaps = 7/518 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC--AQVLMTHLGKEIHGF 96
           +N ++  ++          ++  M   G   + +T   +LKAC    +   ++ K++H  
Sbjct: 127 WNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYV-KQVHSR 185

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
               G D    V+N LI +YS+ G + SA+ +F+ +  +D+V+W  MI G  + GL EEA
Sbjct: 186 TFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEA 245

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           + +  +M   +I P+   + S++S    +   +LG+ +H  V++     +    +   L+
Sbjct: 246 ILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSE--TYVCNGLV 303

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
            +YS+   L  A+++F+ +N    VS+  +ISG ++    +  + LF +M  + + P  I
Sbjct: 304 ALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCI 363

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T+ SL+  C  VG L  G  LH++ ++ G    + +  +L+D+Y KC ++ +A   F   
Sbjct: 364 TVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXT 423

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           +++++++WN ++ AY Q   +  +FE+F  M++  + PN+ T   +L  CT  GAL +G+
Sbjct: 424 ETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE 483

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +HT++ K G +++V + + L+DMYAK G +  A R+       D+  W AM+AGY  H 
Sbjct: 484 QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHD 543

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
              EAL  F +ME  G++ + I F   ++AC+    + +G+ +  +  +  G    +   
Sbjct: 544 MFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQ-SYAAGFGADLSIN 602

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
             ++ L  R G + EA+   + +  + N I W +L++ 
Sbjct: 603 NALISLYARCGRIQEAYLAFEKIGDKNN-ISWNSLVSG 639



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/508 (27%), Positives = 244/508 (48%), Gaps = 7/508 (1%)

Query: 53  SSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNAL 112
           S  + +  FM + G   +      +L+ C           +H    K+G DG+  + ++L
Sbjct: 40  SKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSL 99

Query: 113 IQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPS- 171
           +  Y   G    A  +FDE  NR V SW+ MI  +       +   + R M    I P+ 
Sbjct: 100 VDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNG 159

Query: 172 -EVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQ 230
              A +    +  D+A  +  K +H+       D      +A  LID+YSK G +  AK+
Sbjct: 160 YTFAGVLKACVGGDIA-FNYVKQVHSRTFYYGFDSS--PLVANLLIDLYSKNGYIESAKK 216

Query: 231 LFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGG 290
           +FN +    +V+W  MISG  +     E + LF +M    +FP+   + S++     +  
Sbjct: 217 VFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQL 276

Query: 291 LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
            +LG+ LH  +++ GF     + N LV +Y + R++ SA  +F  M S+D + +N++IS 
Sbjct: 277 FELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISG 336

Query: 351 YAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
             Q    D+A ELF  M+   ++P+ +T+  LLS C   GAL  G  LH++  K G+  D
Sbjct: 337 LVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSAD 396

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
           +IL+ +L+D+Y+KC DV  A++ F      +I +WN M+  YG      ++   F  M+ 
Sbjct: 397 IILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQM 456

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
            G+ PN  T+  +L  C+  G +  G+ +   ++   G    +     ++D+  + G L 
Sbjct: 457 EGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIK-TGFQLNVYVCSVLIDMYAKYGQLA 515

Query: 531 EAHEMIKSMPLRPNMIVWGALLAASKLH 558
            A  +++ +P   +++ W A++A    H
Sbjct: 516 LALRILRRLP-EDDVVSWTAMIAGYVQH 542



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 226/457 (49%), Gaps = 13/457 (2%)

Query: 21  IKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA 80
           ++T  KF        +  +N ++ +Y + +  S +  I+  M+  G   + FT P+IL+ 
Sbjct: 413 VETAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRT 472

Query: 81  CAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSW 140
           C  +   +LG++IH   IK G   + YV + LI MY++ G L  A  +   +P  DVVSW
Sbjct: 473 CTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSW 532

Query: 141 STMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR 200
           + MI GY +  +  EAL++  EM +  I+   +   S +S  A +  +  G+ IHA    
Sbjct: 533 TAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYA 592

Query: 201 NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
                 L  +I  ALI +Y++CG +  A   F ++   + +SW  ++SG  +     E +
Sbjct: 593 AGFGADL--SINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEAL 650

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
           ++F  M+      +  T  S I     +  ++ G+ +H+ +L+ G++    ++N+L+ +Y
Sbjct: 651 QVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLY 710

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
            K   I  A   F+ M  ++V+ WNA+I+ Y+Q  C  +A  LF  MKV  + PN VT V
Sbjct: 711 AKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFV 770

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT----ALVDMYAKCGDVNGAYRLFSE 436
           G+LS C+  G ++ G     Y E      D++ K+     +VD+  + G ++ A     E
Sbjct: 771 GVLSACSHIGLVKEGL---DYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKE 827

Query: 437 -AIYRDICMWNAMMAGYGMHG---CGEEALIFFVDME 469
             I  D  +W  +++   +H     GE A    +++E
Sbjct: 828 MPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELE 864



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 179/373 (47%), Gaps = 50/373 (13%)

Query: 15  QCHAHIIKTHFKFSY---TNIINPLTRYNSL---------------------VTSYIKNN 50
           Q H H+IKT F+ +    + +I+   +Y  L                     +  Y++++
Sbjct: 484 QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHD 543

Query: 51  KPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSN 110
             S AL ++  M   G + DN    + + ACA +     G++IH  +   G   D  ++N
Sbjct: 544 MFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINN 603

Query: 111 ALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRP 170
           ALI +Y+ CG +  A   F+++ +++ +SW++++ G  + G  EEAL+V   M   +   
Sbjct: 604 ALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEV 663

Query: 171 SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQ 230
           +     S +S  A +A++  G+ IH+ V++   D +  V  + +LI +Y+K G+++ A +
Sbjct: 664 NMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREV--SNSLISLYAKSGSISDAWR 721

Query: 231 LFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGG 290
            FN +++ +V+SW  MI+GY +     E +RLF EM    + P+ +T + ++  C  +G 
Sbjct: 722 EFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIG- 780

Query: 291 LQLGKWLHAYILRNGFEFSLAMAN------------ALVDMYGKCREIRSARTLFDGMK- 337
                     +++ G ++  +M               +VD+ G+  ++  A      M  
Sbjct: 781 ----------LVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPI 830

Query: 338 SKDVMIWNAVISA 350
             D MIW  ++SA
Sbjct: 831 PADAMIWRTLLSA 843


>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 215/597 (36%), Positives = 343/597 (57%), Gaps = 43/597 (7%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           ++L+    +   H   +IH   + +GL    ++   LI ++S    +  AR++ D+ P+ 
Sbjct: 4   SLLRTATSLTQIH---QIHAQTLIHGLPLQTHLIPKLIDLHS----IDYARFVLDQTPSP 56

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
              SW+++IR Y   G P+ +L +  +M     +PS      ++   + +  V  G+ IH
Sbjct: 57  TDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIH 116

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
             V+R      L V    +LIDMY KC  L  A+  ++ +     VSW  +ISGY++  +
Sbjct: 117 THVLRLGFGSDLFVC--NSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQ 174

Query: 256 INEGVRLFAEM----------------------IE------------ENVFPSEITILSL 281
           + +   LF EM                      +E            + V P+  T++ L
Sbjct: 175 VEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCL 234

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +  C  +   ++G++L  +I  N    +  +  AL+DMY KC ++  A  +FDG+  K++
Sbjct: 235 LSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNL 294

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
             WNA+I+   Q   +++A +L+ HMK   V+PNE+T+V +LS C   GALE+G+ +H Y
Sbjct: 295 PSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLY 354

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
           + + GL+++VIL TALVDMYAKCG ++ A  +F +   +D+ +WNAM+ G   HG G ++
Sbjct: 355 LGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDS 414

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVD 521
           L  F  M R+GV+PN +TFIG+L+AC+H+GLV EG+  F  M    GL PK+EHY CMVD
Sbjct: 415 LAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVD 474

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGY 581
           LLGRAG L EA+E++++M + P+ I+WGALL+A ++H+N  + +  +  I+  +  N G+
Sbjct: 475 LLGRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPNIGF 534

Query: 582 NVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
            +L+SNIYA + RW DVA VRR +KE R+KK  G S VEV+G+VH+F+     + KS
Sbjct: 535 CILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVEVDGVVHRFVVEDTTHLKS 591



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 243/453 (53%), Gaps = 38/453 (8%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL+ +Y  +  P ++L +Y  M ++ ++  NFT P +LKAC+ +     G++IH   +
Sbjct: 61  WNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIHTHVL 120

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G   D +V N+LI MY +C  L SAR  +D+M  RD VSW+++I GY + G  E+A +
Sbjct: 121 RLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARD 180

Query: 159 VMREM-----------------------------RFM-----DIRPSEVAMISMVSLFAD 184
           +  EM                             R M     +++P+   M+ ++S  + 
Sbjct: 181 LFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACST 240

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
           + + ++G+ +   V  +     L   + TALIDMYSKCG++  A ++F+ ++  ++ SW 
Sbjct: 241 LCNYEVGRFLS--VFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWN 298

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
            +I+G ++   + E + L+  M  ++V P+EIT+++++  C  +G L+LG+ +H Y+ RN
Sbjct: 299 AIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRN 358

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
           G + ++ +A ALVDMY KC +I  A  +F     KDV +WNA+I   A       +  +F
Sbjct: 359 GLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLAVF 418

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-WLHTYIEKQGLEVDVILKTALVDMYAK 423
             M  + V+PN+VT +G+LS C  +G +E G+    +  +K GL   +     +VD+  +
Sbjct: 419 SQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGR 478

Query: 424 CGDVNGAYRLFSEA-IYRDICMWNAMMAGYGMH 455
            G +  AY L     I  D  +W A+++   +H
Sbjct: 479 AGHLKEAYELVQNMLIPPDSIIWGALLSACRIH 511



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 121/245 (49%), Gaps = 15/245 (6%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++T  ++      A+++Y  M+    + +  T+  +L ACA +    LG+E+H 
Sbjct: 294 LPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHL 353

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +  +NGLD +  ++ AL+ MY++CG +  A  +F +   +DV  W+ MI G    G   +
Sbjct: 354 YLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRD 413

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA--- 212
           +L V  +M    ++P++V  I ++S       V+ G+   + +      +K G++     
Sbjct: 414 SLAVFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMA-----DKHGLSPKLEH 468

Query: 213 -TALIDMYSKCGNLAYAKQLF-NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
              ++D+  + G+L  A +L  N L     + W  ++S    C  I+  + L A+ I E 
Sbjct: 469 YACMVDLLGRAGHLKEAYELVQNMLIPPDSIIWGALLSA---C-RIHRNLEL-ADKISET 523

Query: 271 VFPSE 275
           +  S+
Sbjct: 524 IMASQ 528


>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Brachypodium distachyon]
          Length = 773

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 217/563 (38%), Positives = 341/563 (60%), Gaps = 8/563 (1%)

Query: 65  NGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVS 124
           +G+  ++ T+ + L+AC  +     G+ +HG+A+K G+   A V +AL  MYS+C     
Sbjct: 215 SGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTED 274

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           A  LF E+  +DVVSW+ +I  Y R GL  EA+E+ +EM    ++P EV +  ++S    
Sbjct: 275 ACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSGLGS 334

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
            A+V+ GKA HA ++R  ++    V IA +LI MY K   +  A  +F  L+Q    SW+
Sbjct: 335 SANVNRGKAFHAVIIR--RNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWS 392

Query: 245 VMISGYIRCNEINEGVRLFAEMI--EENVFPSEIT-ILSLIIECGFVGGLQLGKWLHAYI 301
           +M++GY +     + + L+ +M   + + F  +IT ++S I  C  +G L+LG+ +H Y 
Sbjct: 393 LMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYS 452

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISAYAQAHCIDKA 360
           ++   + + ++ N+L+ MYG+C     A  +F   K  +DV+ WNA+IS+Y+     + A
Sbjct: 453 IKCLLDEN-SITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDA 511

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
             L+  M    V+PN  T++ ++S C    ALE G+ LH+Y++  GLE DV + TALVDM
Sbjct: 512 LSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTALVDM 571

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           Y KCG +  A  +F   + RD+  WN M++GYGMHG   +AL  F +ME   +KPN +TF
Sbjct: 572 YTKCGQLGTARGIFDSMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTF 631

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
           + +L+AC HAGLV EG+ +F +M  G  L P ++HY CMVDLLG++GLL EA +++ +MP
Sbjct: 632 LAILSACCHAGLVDEGRKLFIRM-GGYRLEPNLKHYACMVDLLGKSGLLQEAEDLVLAMP 690

Query: 541 LRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAG 600
           ++P+  VWG LL+A K+H N  MG   A +    +P+N GY +LMSN Y  A +W+++  
Sbjct: 691 IKPDGGVWGTLLSACKVHDNFEMGLRVAKKAFSSDPRNDGYYILMSNSYGSAEKWDEIEK 750

Query: 601 VRRVMKEIRVKKEPGFSSVEVNG 623
           +R  MK   V+K  G+S+V+V G
Sbjct: 751 LRDTMKNYGVEKGVGWSAVDVWG 773



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 164/562 (29%), Positives = 284/562 (50%), Gaps = 20/562 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL+ S+   +   SAL+ +  MR +G+    FT P    A A++    +G  +H +++
Sbjct: 81  WNSLLRSHHCASDFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSV 140

Query: 99  KNGL---DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           K GL   DG   VS++L+ MY+ CGSL  A  LFDEM  RDVV+W+ ++ G  R G   +
Sbjct: 141 KFGLLAGDGSVAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGK 200

Query: 156 AL----EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVA 210
            +    +++R       RP+   M S +     + ++  G+ +H   V+   +D  L   
Sbjct: 201 GICYLVQMIRLAGDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCAL--- 257

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           + +AL  MYSKC     A  LF  L +  VVSWT +I  Y R     E V LF EM +  
Sbjct: 258 VVSALFSMYSKCDMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSG 317

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + P E+ +  ++   G    +  GK  HA I+R  F  S+ +AN+L+ MYGK   +  A 
Sbjct: 318 LQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAG 377

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV---SKVRPNEVTMVGLLSLCT 387
           T+F  +  +D   W+ +++ Y +A    K  EL+  M+     +   +  ++V  +S C+
Sbjct: 378 TVFGMLHQRDDESWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCS 437

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA-IYRDICMWN 446
             G L +G+ +H Y  K  L+ + I   +L+ MY +CG+   A ++F+ A + RD+  WN
Sbjct: 438 RLGRLRLGQSVHCYSIKCLLDENSI-TNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWN 496

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           A+++ Y   G   +AL  +  M    VKPN  T I +++AC++   +  G+ +    V  
Sbjct: 497 ALISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGE-LLHSYVKN 555

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH--KNPSMG 564
           +GL   +     +VD+  + G L  A  +  SM L+ +++ W  +++   +H   N ++ 
Sbjct: 556 MGLESDVSISTALVDMYTKCGQLGTARGIFDSM-LQRDVVTWNVMISGYGMHGEANQALK 614

Query: 565 EIAATQILEIEPQNYGYNVLMS 586
             +  +   I+P +  +  ++S
Sbjct: 615 LFSEMEAGSIKPNSLTFLAILS 636



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 216/422 (51%), Gaps = 8/422 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +  L+ +Y +      A+ ++  M ++G + D   +  +L         + GK  H   I
Sbjct: 290 WTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSGLGSSANVNRGKAFHAVII 349

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +        ++N+LI MY +   +  A  +F  +  RD  SWS M+ GY + GL  + LE
Sbjct: 350 RRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVAGYCKAGLDVKCLE 409

Query: 159 VMREMRFMD---IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           + R+M+  D         +++S +S  + +  + LG+++H   ++   DE    +I  +L
Sbjct: 410 LYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKCLLDEN---SITNSL 466

Query: 216 IDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           I MY +CGN   A ++F     +  VV+W  +IS Y      N+ + L+ +M+ E+V P+
Sbjct: 467 IGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQMLTEDVKPN 526

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
             T++++I  C  +  L+ G+ LH+Y+   G E  ++++ ALVDMY KC ++ +AR +FD
Sbjct: 527 SSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQLGTARGIFD 586

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M  +DV+ WN +IS Y      ++A +LF  M+   ++PN +T + +LS C  AG ++ 
Sbjct: 587 SMLQRDVVTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSACCHAGLVDE 646

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL-FSEAIYRDICMWNAMMAGYG 453
           G+ L   +    LE ++     +VD+  K G +  A  L  +  I  D  +W  +++   
Sbjct: 647 GRKLFIRMGGYRLEPNLKHYACMVDLLGKSGLLQEAEDLVLAMPIKPDGGVWGTLLSACK 706

Query: 454 MH 455
           +H
Sbjct: 707 VH 708



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 139/510 (27%), Positives = 239/510 (46%), Gaps = 11/510 (2%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            +H  A  +GL      +  L+  YS  G    A   F   P  D   W++++R +H   
Sbjct: 33  RLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCAS 92

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG-VA 210
             + AL   R MR    RPS        S  A++A + +G ++H+  V+       G VA
Sbjct: 93  DFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGSVA 152

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI--- 267
           ++++L+ MY++CG+L  A +LF+ + +  VV+WT ++SG +R  E  +G+    +MI   
Sbjct: 153 VSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLA 212

Query: 268 -EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
            +    P+  T+ S +  CG +G L  G+ LH Y ++ G      + +AL  MY KC   
Sbjct: 213 GDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMT 272

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             A  LF  +  KDV+ W  +I AY +     +A ELF  M+ S ++P+EV +  +LS  
Sbjct: 273 EDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSGL 332

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
             +  +  GK  H  I ++     V++  +L+ MY K   V+ A  +F     RD   W+
Sbjct: 333 GSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWS 392

Query: 447 AMMAGYGMHGCGEEALIFFVDME---RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            M+AGY   G   + L  +  M+         +  + +  +++CS  G +  G+SV    
Sbjct: 393 LMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYS 452

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
           +  L     I +   ++ + GR G  + A ++     LR +++ W AL+ +S  H   S 
Sbjct: 453 IKCLLDENSITNS--LIGMYGRCGNFELACKIFAVAKLRRDVVTWNALI-SSYSHVGRSN 509

Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVAN 593
             ++    +  E      + L++ I A AN
Sbjct: 510 DALSLYGQMLTEDVKPNSSTLITVISACAN 539



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 94/168 (55%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           F+   +   +  +N+L++SY    + + AL++Y  M     + ++ T+ T++ ACA +  
Sbjct: 483 FAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISACANLAA 542

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
              G+ +H +    GL+ D  +S AL+ MY++CG L +AR +FD M  RDVV+W+ MI G
Sbjct: 543 LEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQLGTARGIFDSMLQRDVVTWNVMISG 602

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           Y   G   +AL++  EM    I+P+ +  ++++S       VD G+ +
Sbjct: 603 YGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSACCHAGLVDEGRKL 650


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  404 bits (1037), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 211/593 (35%), Positives = 343/593 (57%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YNSL++  ++      AL ++  M+++  + D  T+ ++L ACA V   H G ++H  AI
Sbjct: 330 YNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAI 389

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+  D  +  +L+ +YS+C  + +A   F      ++V W+ M+  Y +     ++ E
Sbjct: 390 KAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFE 449

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R+M+   + P++    S++     +  + LG+ IH  V++     +L V + + LIDM
Sbjct: 450 IFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKT--GFQLNVYVCSVLIDM 507

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G LA A ++  RL ++ VVSWT MI+GY++ +  +E ++LF EM    +    I  
Sbjct: 508 YAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGF 567

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S I  C  +  L+ G+ +HA     GF   L++ NAL+ +Y +C  I+ A   F+ +  
Sbjct: 568 ASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGD 627

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K+ + WN+++S  AQ+   ++A ++F+ M  ++   N  T    +S       ++ G+ +
Sbjct: 628 KNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQI 687

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H+ + K G + +  +  +L+ +YAK G ++ A+R F++   R++  WNAM+ GY  HGCG
Sbjct: 688 HSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCG 747

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F +M+  G+ PN +TF+G+L+ACSH GLV EG   F+ M     LVPK EHY C
Sbjct: 748 MEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVC 807

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VDLLGRAG LD A E IK MP+  + ++W  LL+A  +HKN  +GE AA  +LE+EP++
Sbjct: 808 VVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPED 867

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VL+SNIYAV+ +W      R++MK+  VKKEPG S +EV   VH F  G
Sbjct: 868 SATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVHAFYAG 920



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 140/518 (27%), Positives = 270/518 (52%), Gaps = 7/518 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC--AQVLMTHLGKEIHGF 96
           +N ++  ++          ++  M   G   + +T   +LKAC    +   ++ K++H  
Sbjct: 127 WNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYV-KQVHSR 185

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
               G D    V+N LI +YS+ G + SA+ +F+ +  +D+V+W  MI G  + GL EEA
Sbjct: 186 TFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEA 245

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           + +  +M   +I P+   + S++S    +   +LG+ +H  V++     +    +   L+
Sbjct: 246 ILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSE--TYVCNGLV 303

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
            +YS+   L  A+++F+ +N    VS+  +ISG ++    +  + LF +M  + + P  I
Sbjct: 304 ALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCI 363

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T+ SL+  C  VG L  G  LH++ ++ G    + +  +L+D+Y KC ++ +A   F   
Sbjct: 364 TVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTT 423

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           +++++++WN ++ AY Q   +  +FE+F  M++  + PN+ T   +L  CT  GAL +G+
Sbjct: 424 ETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE 483

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +HT++ K G +++V + + L+DMYAK G +  A R+       D+  W AM+AGY  H 
Sbjct: 484 QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHD 543

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
              EAL  F +ME  G++ + I F   ++AC+    + +G+ +  +  +  G    +   
Sbjct: 544 MFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQ-SYAAGFGADLSIN 602

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
             ++ L  R G + EA+   + +  + N I W +L++ 
Sbjct: 603 NALISLYARCGRIQEAYLAFEKIGDKNN-ISWNSLVSG 639



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/508 (27%), Positives = 244/508 (48%), Gaps = 7/508 (1%)

Query: 53  SSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNAL 112
           S  + +  FM + G   +      +L+ C           +H    K+G DG+  + ++L
Sbjct: 40  SKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSL 99

Query: 113 IQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPS- 171
           +  Y   G    A  +FDE  NR V SW+ MI  +       +   + R M    I P+ 
Sbjct: 100 VDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNG 159

Query: 172 -EVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQ 230
              A +    +  D+A  +  K +H+       D      +A  LID+YSK G +  AK+
Sbjct: 160 YTFAGVLKACVGGDIA-FNYVKQVHSRTFYYGFDSS--PLVANLLIDLYSKNGYIESAKK 216

Query: 231 LFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGG 290
           +FN +    +V+W  MISG  +     E + LF +M    +FP+   + S++     +  
Sbjct: 217 VFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQL 276

Query: 291 LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
            +LG+ LH  +++ GF     + N LV +Y + R++ SA  +F  M S+D + +N++IS 
Sbjct: 277 FELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRDGVSYNSLISG 336

Query: 351 YAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
             Q    D+A ELF  M+   ++P+ +T+  LLS C   GAL  G  LH++  K G+  D
Sbjct: 337 LVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHSHAIKAGMSAD 396

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
           +IL+ +L+D+Y+KC DV  A++ F      +I +WN M+  YG      ++   F  M+ 
Sbjct: 397 IILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQM 456

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
            G+ PN  T+  +L  C+  G +  G+ +   ++   G    +     ++D+  + G L 
Sbjct: 457 EGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIK-TGFQLNVYVCSVLIDMYAKYGQLA 515

Query: 531 EAHEMIKSMPLRPNMIVWGALLAASKLH 558
            A  +++ +P   +++ W A++A    H
Sbjct: 516 LALRILRRLP-EDDVVSWTAMIAGYVQH 542



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 227/457 (49%), Gaps = 13/457 (2%)

Query: 21  IKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA 80
           ++T  KF  T     +  +N ++ +Y + +  S +  I+  M+  G   + FT P+IL+ 
Sbjct: 413 VETAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRT 472

Query: 81  CAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSW 140
           C  +   +LG++IH   IK G   + YV + LI MY++ G L  A  +   +P  DVVSW
Sbjct: 473 CTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSW 532

Query: 141 STMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR 200
           + MI GY +  +  EAL++  EM +  I+   +   S +S  A +  +  G+ IHA    
Sbjct: 533 TAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYA 592

Query: 201 NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
                 L  +I  ALI +Y++CG +  A   F ++   + +SW  ++SG  +     E +
Sbjct: 593 AGFGADL--SINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEAL 650

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
           ++F  M+      +  T  S I     +  ++ G+ +H+ +L+ G++    ++N+L+ +Y
Sbjct: 651 QVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLY 710

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
            K   I  A   F+ M  ++V+ WNA+I+ Y+Q  C  +A  LF  MKV  + PN VT V
Sbjct: 711 AKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFV 770

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT----ALVDMYAKCGDVNGAYRLFSE 436
           G+LS C+  G ++ G     Y E      D++ K+     +VD+  + G ++ A     E
Sbjct: 771 GVLSACSHIGLVKEGL---DYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKE 827

Query: 437 -AIYRDICMWNAMMAGYGMHG---CGEEALIFFVDME 469
             I  D  +W  +++   +H     GE A    +++E
Sbjct: 828 MPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELE 864



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 179/373 (47%), Gaps = 50/373 (13%)

Query: 15  QCHAHIIKTHFKFSY---TNIINPLTRYNSL---------------------VTSYIKNN 50
           Q H H+IKT F+ +    + +I+   +Y  L                     +  Y++++
Sbjct: 484 QIHTHVIKTGFQLNVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHD 543

Query: 51  KPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSN 110
             S AL ++  M   G + DN    + + ACA +     G++IH  +   G   D  ++N
Sbjct: 544 MFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINN 603

Query: 111 ALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRP 170
           ALI +Y+ CG +  A   F+++ +++ +SW++++ G  + G  EEAL+V   M   +   
Sbjct: 604 ALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEV 663

Query: 171 SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQ 230
           +     S +S  A +A++  G+ IH+ V++   D +  V  + +LI +Y+K G+++ A +
Sbjct: 664 NMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREV--SNSLISLYAKSGSISDAWR 721

Query: 231 LFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGG 290
            FN +++ +V+SW  MI+GY +     E +RLF EM    + P+ +T + ++  C  +G 
Sbjct: 722 EFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIG- 780

Query: 291 LQLGKWLHAYILRNGFEFSLAMAN------------ALVDMYGKCREIRSARTLFDGMK- 337
                     +++ G ++  +M               +VD+ G+  ++  A      M  
Sbjct: 781 ----------LVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPI 830

Query: 338 SKDVMIWNAVISA 350
             D MIW  ++SA
Sbjct: 831 PADAMIWRTLLSA 843


>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 767

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/624 (35%), Positives = 353/624 (56%), Gaps = 40/624 (6%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL+      N P +AL  +  M+ +    +NFT P +LKACA +       ++H +  
Sbjct: 21  WNSLIAKNATQN-PQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLT 79

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP--NRDVVSWSTMIRGYHRGGLPEEA 156
           + GL  D + + AL+  Y +CG    A  +FDEMP  + DVVSW+ +I  Y   G  +EA
Sbjct: 80  RLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEA 139

Query: 157 LEVMREMRFM-DIRPSEVAMISMVSLFADVADVDLG---------KAIHACVVRNCKDEK 206
            +    MR+M     SE   + +VSL A V+   +G          A+H  VV      K
Sbjct: 140 FKAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVV------K 193

Query: 207 LGVAIAT----ALIDMYSKCGNLAYAKQLFN--RLNQNSVVSWTVMISGYIRCNEINEGV 260
            G  ++T    +++ MYS C ++  A ++FN   + Q  VVSW  +ISG+    E    +
Sbjct: 194 YGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFTLNGEAERAL 253

Query: 261 RLFAEMIEEN---VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA----MA 313
           R F +M+ E    V P+ +T+++L+  C  +G ++   W+H YI        +A    + 
Sbjct: 254 RTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVL 313

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS--- 370
            AL+DM+ +C  +  AR +FDG++ K+V+ W+A+I+ Y Q  C ++A  LF  M +    
Sbjct: 314 TALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNM 373

Query: 371 ---KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
              +V+PN VT+V +++ C+  GA      +H Y    GL+ D  + +AL+DM AKCGD+
Sbjct: 374 VGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDI 433

Query: 428 NGAYRLFSE--AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
               ++FSE     R +  W++M+   G+HG G+ AL  F +M   G +PN IT+I +L+
Sbjct: 434 EHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLS 493

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
           ACSHAGLV +GKS F+ M    G+ P  +HY C+VDLLGRAG LDEAH +I +MP++ ++
Sbjct: 494 ACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADL 553

Query: 546 IVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVM 605
            +WG+LLAA  LH N  +GEI   +IL ++  + G++VL++N+Y  A RW+DV  +R  +
Sbjct: 554 ALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVEL 613

Query: 606 KEIRVKKEPGFSSVEVNGLVHKFI 629
           +   ++K PG S +E+   V+ F+
Sbjct: 614 RRSGLRKIPGQSFIEIGNEVYSFM 637


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 231/657 (35%), Positives = 344/657 (52%), Gaps = 85/657 (12%)

Query: 7   FLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRY-NSLVTSYIKNNKPSSALNIYAFMRKN 65
           F+N+ Q+ Q  +HI             NP     N+++  Y++ N P  A+ +Y FM ++
Sbjct: 73  FININQSYQIFSHIE------------NPNGFICNTMMKGYMQRNSPCKAIWVYKFMLES 120

Query: 66  GSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSA 125
               DN+T P + ++C+  L    GK I    +K G D D Y+ N LI MY+ CG+L  A
Sbjct: 121 NVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDA 180

Query: 126 RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV 185
           R +FD     D+VSW++M+ GY   G  EEA +V   M      P               
Sbjct: 181 RKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRM------PE-------------- 220

Query: 186 ADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
                         RN       V  + ++I ++ K GN+  A +LFN + Q  +VSW+ 
Sbjct: 221 --------------RN-------VIASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSA 259

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
           +IS Y +     E + LF EM    +   E+ +LS++  C  +  +  GK +H  +++ G
Sbjct: 260 LISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVG 319

Query: 306 FEFSLAMANALVDMYG-------------------------------KCREIRSARTLFD 334
            E  + + NAL+ MY                                KC EI  AR LFD
Sbjct: 320 IETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFD 379

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M  KD + W+A+IS YAQ     +   LF  M++   +P+E  +V ++S CT   AL+ 
Sbjct: 380 SMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQ 439

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           GKW+H YI K GL++++IL T L++MY K G V  A  +F     + +  WNA++ G  M
Sbjct: 440 GKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAM 499

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           +G  +++L  F +M+  GV PN ITF+ +L AC H GLV EG   F+ M+    + P I+
Sbjct: 500 NGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIK 559

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HYGCMVDLLGRAG+L EA E+I+SMP+ P++  WGALL A K + +   GE    +++E+
Sbjct: 560 HYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVEL 619

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            P + G+NVL+SNIYA    W DV  VR +M++  V K PG S +E +G VH+F+ G
Sbjct: 620 HPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAG 676


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  403 bits (1036), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 210/593 (35%), Positives = 335/593 (56%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YNSL++   +      AL ++  M+ +  + D  T+ ++L ACA V   + GK++H + I
Sbjct: 282 YNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVI 341

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+  D  +  +L+ +Y +C  + +A   F      +VV W+ M+  Y + G   E+  
Sbjct: 342 KMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYW 401

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+   + P++    S++     +  +DLG+ IH  V+++    +  V + + LIDM
Sbjct: 402 IFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKS--GFQFNVYVCSVLIDM 459

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G L  A+ +  RL +  VVSWT MI+GY + +   E ++LF EM  + +    I  
Sbjct: 460 YAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGF 519

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S I  C  +  L  G+ +HA    +G+   L++ NALV +Y +C   + A   F+ + +
Sbjct: 520 SSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDA 579

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WNA+IS +AQ+   ++A ++F  M  + V  N  T    +S       ++ GK +
Sbjct: 580 KDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQI 639

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + K G + +      L+ +Y+KCG +  A R F E   +++  WNAM+ GY  HG G
Sbjct: 640 HAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYG 699

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EA+  F +M++ G+ PN +TF+G+L+ACSH GLV EG S F  M    GLVPK EHY C
Sbjct: 700 SEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVC 759

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VDLLGRA LL  A E I+ MP+ P+ ++W  LL+A  +HKN  +GE AA  +LE+EP++
Sbjct: 760 VVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPED 819

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VL+SN+YAV+ +W+     R++MK+  VKKEPG S +EV   +H F  G
Sbjct: 820 SATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIHAFFVG 872



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 271/517 (52%), Gaps = 7/517 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT-HLGKEIHGFA 97
           +N +++  +     S  L +++ M       D  T  ++L+AC+       + ++IH   
Sbjct: 79  WNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKI 138

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           I +G      V N LI +YS+ G +  A+ +F+ +  +D VSW  MI G  + G  +EA+
Sbjct: 139 IHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAI 198

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALI 216
            +  +M    + P+     S++S    +    LG+ +H  +V+     E     +  AL+
Sbjct: 199 LLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETF---VCNALV 255

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
            +YS+ GNL  A+Q+F+++++   +S+  +ISG  +    +  ++LF +M  + + P  +
Sbjct: 256 TLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCV 315

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T+ SL+  C  VG    GK LH+Y+++ G    L +  +L+D+Y KC +I +A   F   
Sbjct: 316 TVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTT 375

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           ++++V++WN ++ AY Q   + +++ +F+ M++  + PN+ T   +L  CT  GAL++G+
Sbjct: 376 ETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGE 435

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +HT + K G + +V + + L+DMYAK G+++ A  +       D+  W AM+AGY  H 
Sbjct: 436 QIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHD 495

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
              EAL  F +ME  G++ + I F   ++AC+    + +G+ +  +  +  G    +   
Sbjct: 496 LFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQS-YISGYSEDLSIG 554

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
             +V L  R G   +A+   + +  + N I W AL++
Sbjct: 555 NALVSLYARCGRAQDAYLAFEKIDAKDN-ISWNALIS 590



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 243/472 (51%), Gaps = 9/472 (1%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
            K++H    K+G DG+  + + LI +Y   G + +A  LFD++P+ +V  W+ +I G   
Sbjct: 29  AKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLA 88

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMV-SLFADVADVDLGKAIHACVVRNCKDEKLG 208
             L  + L +   M   ++ P E    S++ +     A   + + IHA ++ +      G
Sbjct: 89  KKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHH----GFG 144

Query: 209 VA--IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
            +  +   LID+YSK G++  AK +F RL     VSW  MISG  +    +E + LF +M
Sbjct: 145 SSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQM 204

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
            +  V P+     S++  C  +   +LG+ LH +I++ G      + NALV +Y +   +
Sbjct: 205 HKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNL 264

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
            +A  +F  M  +D + +N++IS  AQ    D+A +LF  M++  ++P+ VT+  LLS C
Sbjct: 265 IAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSAC 324

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
              GA   GK LH+Y+ K G+  D+I++ +L+D+Y KC D+  A+  F      ++ +WN
Sbjct: 325 ASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWN 384

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
            M+  YG  G   E+   F+ M+  G+ PN  T+  +L  C+  G +  G+ +  +++  
Sbjct: 385 VMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKS 444

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            G    +     ++D+  + G LD A  +++ +    +++ W A++A    H
Sbjct: 445 -GFQFNVYVCSVLIDMYAKHGELDTARGILQRLR-EEDVVSWTAMIAGYTQH 494



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/437 (28%), Positives = 218/437 (49%), Gaps = 4/437 (0%)

Query: 21  IKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA 80
           I+T  ++  T     +  +N ++ +Y +    S +  I+  M+  G   + +T P+IL+ 
Sbjct: 365 IETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRT 424

Query: 81  CAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSW 140
           C  +    LG++IH   IK+G   + YV + LI MY++ G L +AR +   +   DVVSW
Sbjct: 425 CTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSW 484

Query: 141 STMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR 200
           + MI GY +  L  EAL++ +EM    IR   +   S +S  A +  ++ G+ IHA    
Sbjct: 485 TAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYI 544

Query: 201 NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
           +   E L  +I  AL+ +Y++CG    A   F +++    +SW  +ISG+ +     E +
Sbjct: 545 SGYSEDL--SIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEAL 602

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
           ++F++M +  V  +  T  S +        ++ GK +HA +++ G++     +N L+ +Y
Sbjct: 603 QVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLY 662

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
            KC  I  A+  F  M  K+V+ WNA+I+ Y+Q     +A  LF  MK   + PN VT V
Sbjct: 663 SKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFV 722

Query: 381 GLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AI 438
           G+LS C+  G +  G  +  +  ++ GL         +VD+  +   +  A     E  I
Sbjct: 723 GVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPI 782

Query: 439 YRDICMWNAMMAGYGMH 455
             D  +W  +++   +H
Sbjct: 783 EPDAMIWRTLLSACTVH 799



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 134/289 (46%), Gaps = 3/289 (1%)

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M E  +  +  T L L   C   G L   K LHA I ++GF+    + + L+D+Y    E
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           + +A  LFD + S +V  WN VIS         +   LF  M    V P+E T   +L  
Sbjct: 61  VDNAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRA 120

Query: 386 CTEAGA-LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
           C+   A  ++ + +H  I   G     ++   L+D+Y+K G V+ A  +F     +D   
Sbjct: 121 CSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVS 180

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           W AM++G   +G  +EA++ F  M +S V P    F  +L+AC+   L   G+ +   +V
Sbjct: 181 WVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIV 240

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
              GL  +      +V L  R G L  A ++   M  R + I + +L++
Sbjct: 241 K-WGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMH-RRDRISYNSLIS 287


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 213/603 (35%), Positives = 345/603 (57%), Gaps = 3/603 (0%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           F    + N +  +NS++++Y  N   + AL +++ M K G   + +T    L+AC     
Sbjct: 116 FDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSF 175

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
             LG +IH   +K+G   D YV+NAL+ MY   G +  A  +F  +  +D+V+W++M+ G
Sbjct: 176 IKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTG 235

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           + + GL  EALE   +++  D++P +V++IS++     +  +  GK IHA  ++N  D  
Sbjct: 236 FIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSN 295

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
             + +   LIDMY+KC  ++Y  + F+ +    ++SWT   +GY +     + + L  ++
Sbjct: 296 --ILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQL 353

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
             E +      I S+++ C  +  L   K +H Y +R G      + N ++D+YG+C  I
Sbjct: 354 QMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVLQNTIIDVYGECGII 412

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             A  +F+ ++ KDV+ W ++IS Y      +KA E+F  MK + + P+ VT+V +LS  
Sbjct: 413 DYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAV 472

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
                L+ GK +H +I ++G  ++  +   LVDMYA+CG V  AY++F+    R++ +W 
Sbjct: 473 CSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWT 532

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           AM++ YGMHG GE A+  F+ M+   + P+ ITF+ LL ACSH+GLV EGKS  + M   
Sbjct: 533 AMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCE 592

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
             L P  EHY C+VDLLGR   L+EA++++KSM   P   VW ALL A ++H N  +GE+
Sbjct: 593 YQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEV 652

Query: 567 AATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVH 626
           AA ++LE++  N G  VL+SN++A   RW DV  VR  MK   + K PG S +EV   +H
Sbjct: 653 AAEKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIEVGNKIH 712

Query: 627 KFI 629
            F+
Sbjct: 713 AFL 715



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 157/521 (30%), Positives = 282/521 (54%), Gaps = 6/521 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y+ N +   AL +Y  MR  G   D++T P +LKAC  V     G EIHG AI
Sbjct: 26  WNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAI 85

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR-DVVSWSTMIRGYHRGGLPEEAL 157
           K G D   +V N+L+ +Y++C  +  AR LFD M  R DVVSW+++I  Y   G+  EAL
Sbjct: 86  KYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEAL 145

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            +  EM    +  +     + +    D + + LG  IHA ++++ +   L V +A AL+ 
Sbjct: 146 CLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGR--VLDVYVANALVA 203

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY + G +  A  +F  L    +V+W  M++G+I+    +E +  F ++   ++ P +++
Sbjct: 204 MYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVS 263

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           I+S+I+  G +G L  GK +HAY ++NGF+ ++ + N L+DMY KC  +      FD M 
Sbjct: 264 IISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRAFDLMA 323

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KD++ W    + YAQ  C  +A EL   +++  +  +   +  +L  C     L   K 
Sbjct: 324 HKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKE 383

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H Y  + GL  D +L+  ++D+Y +CG ++ A R+F     +D+  W +M++ Y  +G 
Sbjct: 384 IHGYTIRGGLS-DPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGL 442

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
             +AL  F  M+ +G++P+ +T + +L+A      + +GK +   ++   G + +     
Sbjct: 443 ANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRK-GFILEGSISN 501

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            +VD+  R G +++A+++      R N+I+W A+++A  +H
Sbjct: 502 TLVDMYARCGSVEDAYKIFTCTKNR-NLILWTAMISAYGMH 541



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 230/440 (52%), Gaps = 6/440 (1%)

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           MY +CGS++ A  +FD+M  R + +W+ M+ GY   G    ALE+ REMR + +      
Sbjct: 1   MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
              ++     V D+  G  IH   ++   D    V +  +L+ +Y+KC ++  A++LF+R
Sbjct: 61  FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSF--VFVVNSLVALYAKCNDINGARKLFDR 118

Query: 235 LN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL 293
           +  +N VVSW  +IS Y       E + LF+EM++  V  +  T  + +  C     ++L
Sbjct: 119 MYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKL 178

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           G  +HA IL++G    + +ANALV MY +  ++  A  +F  ++ KD++ WN++++ + Q
Sbjct: 179 GMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQ 238

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
                +A E F  ++ + ++P++V+++ ++      G L  GK +H Y  K G + ++++
Sbjct: 239 NGLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILV 298

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
              L+DMYAKC  ++   R F    ++D+  W    AGY  + C  +AL     ++  G+
Sbjct: 299 GNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGM 358

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
             +      +L AC     + + K +    + G    P +++   ++D+ G  G++D A 
Sbjct: 359 DVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLSDPVLQN--TIIDVYGECGIIDYAV 416

Query: 534 EMIKSMPLRPNMIVWGALLA 553
            + +S+  + +++ W ++++
Sbjct: 417 RIFESIECK-DVVSWTSMIS 435


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  403 bits (1035), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 206/543 (37%), Positives = 328/543 (60%), Gaps = 9/543 (1%)

Query: 92  EIHGFAIKNG-LDGDAYVSNALIQMYSECGSLVS---ARYLFDEMPNRDVVSWSTMIRGY 147
           ++H   IK+G L G     ++L++  +   +L+    + +     P      ++ ++R  
Sbjct: 34  QLHAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAL 93

Query: 148 HRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDE 205
              G PE+AL +  EM     + P +  +   +   + +  +D+G+ I A  V R    +
Sbjct: 94  LHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMAD 153

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           +    + ++LI MY+ C ++A A+ LF+ + +N VV W  +I+ Y++     E V +F  
Sbjct: 154 RF---VLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKG 210

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M+E  V   EIT++S++  CG +G  +LGKW+  Y+   G   +  +  AL+DMY KC E
Sbjct: 211 MLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGE 270

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           +  AR LFDGM+S+DV+ W+A+IS Y QA    +A  LF  M++++V PN+VTMV +LS 
Sbjct: 271 LGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSA 330

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
           C   GALE GKW+H+YI ++ L + +IL TALVD YAKCG ++ A   F     ++   W
Sbjct: 331 CAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTW 390

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
            A++ G   +G G EAL  F  M ++ ++P  +TFIG+L ACSH+ LV EG+  FD M  
Sbjct: 391 TALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQ 450

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
             G+ P+ EHYGC+VDLLGRAGL+DEA++ I++MP+ PN ++W ALL++  +HKN  +GE
Sbjct: 451 DYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGE 510

Query: 566 IAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLV 625
            A  QI+ + P + G  +L+SNIYA   +W + A +R+ MK+  ++K PG S +E++G+V
Sbjct: 511 EALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIELDGVV 570

Query: 626 HKF 628
            +F
Sbjct: 571 VEF 573



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 138/442 (31%), Positives = 235/442 (53%), Gaps = 14/442 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTHLGKEIHGFA 97
           YN L+ + +    P  AL+++  M    S   D  T+   LK+C+++    +G+ I  +A
Sbjct: 86  YNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYA 145

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K GL  D +V ++LI MY+ C  + +A+ LFD +    VV W+ +I  Y + G   E +
Sbjct: 146 VKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVV 205

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA---IATA 214
           E+ + M  + +   E+ ++S+V+    + D  LGK +   V     DEK  V    + TA
Sbjct: 206 EMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYV-----DEKGLVRNRNLMTA 260

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LIDMY+KCG L  A++LF+ +    VV+W+ MISGY + ++  E + LF+EM    V P+
Sbjct: 261 LIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPN 320

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           ++T++S++  C  +G L+ GKW+H+YI R     ++ +  ALVD Y KC  I  A   F+
Sbjct: 321 DVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFE 380

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M  K+   W A+I   A      +A ELF  M+ + + P +VT +G+L  C+ +  +E 
Sbjct: 381 SMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEE 440

Query: 395 G-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGY 452
           G +   +  +  G++        +VD+  + G ++ AY+   +  I  +  +W A+++  
Sbjct: 441 GRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSC 500

Query: 453 GMHG---CGEEALIFFVDMERS 471
            +H     GEEAL   V +  S
Sbjct: 501 AVHKNVEIGEEALKQIVSLNPS 522



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 171/321 (53%), Gaps = 4/321 (1%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           N +  +N+++T+Y+KN      + ++  M + G   D  T+ +++ AC ++    LGK +
Sbjct: 183 NGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWV 242

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
             +  + GL  +  +  ALI MY++CG L  AR LFD M +RDVV+WS MI GY +    
Sbjct: 243 AEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQC 302

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            EAL +  EM+  ++ P++V M+S++S  A +  ++ GK +H+ + R  K   L + + T
Sbjct: 303 REALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRR--KRLSLTIILGT 360

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+D Y+KCG +  A + F  +   +  +WT +I G        E + LF+ M + ++ P
Sbjct: 361 ALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEP 420

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTL 332
           +++T + +++ C     ++ G+     + ++ G +        +VD+ G+   I  A   
Sbjct: 421 TDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQF 480

Query: 333 FDGMK-SKDVMIWNAVISAYA 352
              M    + +IW A++S+ A
Sbjct: 481 IRTMPIEPNAVIWRALLSSCA 501


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 226/663 (34%), Positives = 349/663 (52%), Gaps = 53/663 (7%)

Query: 16  CHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIP 75
           C +H +    +F  ++    +  +NSL+ SY  N   +  L ++  M       DN+T P
Sbjct: 74  CLSHAVSLLRRFPPSDA--GVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFP 131

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
            + KAC ++     G+  H  ++  G   + +V NAL+ MYS C SL  AR +FDEM   
Sbjct: 132 FVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVW 191

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           DVVSW+++I  Y + G P+ ALE+   M      RP  + +++++   A +    LGK +
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQL 251

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
           H   V +   + + V     L+DMY+KCG +  A  +F+ ++   VVSW  M++GY +  
Sbjct: 252 HCFAVTSEMIQNMFVG--NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIG 309

Query: 255 EINEGVRLFAEMIEENVF-----------------------------------PSEITIL 279
              + VRLF +M EE +                                    P+E+T++
Sbjct: 310 RFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369

Query: 280 SLIIECGFVGGLQLGKWLHAYILR-------NGFEFSLAMANALVDMYGKCREIRSARTL 332
           S++  C  VG L  GK +H Y ++       NG      + N L+DMY KC+++ +AR +
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAM 429

Query: 333 FDGM--KSKDVMIWNAVISAYAQAHCIDKAFELFIHM--KVSKVRPNEVTMVGLLSLCTE 388
           FD +  K +DV+ W  +I  Y+Q    +KA EL   M  +  + RPN  T+   L  C  
Sbjct: 430 FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS 489

Query: 389 AGALEMGKWLHTY-IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
             AL +GK +H Y +  Q   V + +   L+DMYAKCG ++ A  +F   + ++   W +
Sbjct: 490 LAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTS 549

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           +M GYGMHG GEEAL  F +M R G K +G+T + +L ACSH+G++ +G   F++M    
Sbjct: 550 LMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVF 609

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
           G+ P  EHY C+VDLLGRAG L+ A  +I+ MP+ P  +VW A L+  ++H    +GE A
Sbjct: 610 GVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYA 669

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE-VNGLVH 626
           A +I E+   + G   L+SN+YA A RW DV  +R +M+   VKK PG S VE + G   
Sbjct: 670 AEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTT 729

Query: 627 KFI 629
            F+
Sbjct: 730 FFV 732



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 222/500 (44%), Gaps = 52/500 (10%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRD--VVSWSTMIRGYHRGGLPEEALEVMREMRF 165
           +++ LI  Y   G L  A  L    P  D  V  W+++IR Y   G   + L +   M  
Sbjct: 61  LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
           +   P       +     +++ V  G++ HA  +         V +  AL+ MYS+C +L
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSL--VTGFISNVFVGNALVAMYSRCRSL 178

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPSEITILSLIIE 284
           + A+++F+ ++   VVSW  +I  Y +  +    + +F+ M  E    P  IT+++++  
Sbjct: 179 SDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPP 238

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
           C  +G   LGK LH + + +    ++ + N LVDMY KC  +  A T+F  M  KDV+ W
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298

Query: 345 NAVISAYAQAHCIDKAFELFIHMKVSK--------------------------------- 371
           NA+++ Y+Q    + A  LF  M+  K                                 
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358

Query: 372 --VRPNEVTMVGLLSLCTEAGALEMGKWLHTY-------IEKQGLEVDVILKTALVDMYA 422
             ++PNEVT++ +LS C   GAL  GK +H Y       + K G   + ++   L+DMYA
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418

Query: 423 KCGDVNGAYRLFS--EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM--ERSGVKPNGI 478
           KC  V+ A  +F       RD+  W  M+ GY  HG   +AL    +M  E    +PN  
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           T    L AC+    +  GK +    +        +    C++D+  + G + +A  +  +
Sbjct: 479 TISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538

Query: 539 MPLRPNMIVWGALLAASKLH 558
           M +  N + W +L+    +H
Sbjct: 539 M-MAKNEVTWTSLMTGYGMH 557



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 196/456 (42%), Gaps = 58/456 (12%)

Query: 179 VSLFADVADVDLGKAIHAC----VVRNCKDEKLGVAIATA-----LIDMYSKCGNLAYAK 229
           VSLF+  A       IH C     V+    + L   I T      LI  Y   G L++A 
Sbjct: 20  VSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAV 79

Query: 230 QLFNRL--NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
            L  R   +   V  W  +I  Y      N+ + LF  M   +  P   T   +   CG 
Sbjct: 80  SLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGE 139

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
           +  ++ G+  HA  L  GF  ++ + NALV MY +CR +  AR +FD M   DV+ WN++
Sbjct: 140 ISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSI 199

Query: 348 ISAYAQAHCIDKAFELFIHMKVS-KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           I +YA+      A E+F  M      RP+ +T+V +L  C   G   +GK LH +     
Sbjct: 200 IESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSE 259

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
           +  ++ +   LVDMYAKCG ++ A  +FS    +D+  WNAM+AGY   G  E+A+  F 
Sbjct: 260 MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFE 319

Query: 467 DMER-----------------------------------SGVKPNGITFIGLLNACSHAG 491
            M+                                    SG+KPN +T I +L+ C+  G
Sbjct: 320 KMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVG 379

Query: 492 LVTEGKSV--------FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM-PLR 542
            +  GK +         D   +G G    + +   ++D+  +   +D A  M  S+ P  
Sbjct: 380 ALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ--LIDMYAKCKKVDTARAMFDSLSPKE 437

Query: 543 PNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
            +++ W  ++     H + +      +++ E + Q 
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT 473


>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
          Length = 767

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 223/624 (35%), Positives = 352/624 (56%), Gaps = 40/624 (6%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL+      N P +AL  +  M+ +    +NFT P +LKACA +       ++H +  
Sbjct: 21  WNSLIAKNATQN-PQTALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLPTLQVHAYLT 79

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP--NRDVVSWSTMIRGYHRGGLPEEA 156
           + GL  D + + AL+  Y +CG    A  +FDEMP  + DVVSW+ +I  Y   G  +EA
Sbjct: 80  RLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAYSSNGCVDEA 139

Query: 157 LEVMREMRFM-DIRPSEVAMISMVSLFADVADVDLG---------KAIHACVVRNCKDEK 206
                 MR+M     SE   + +VSL A V+   +G          A+H  VV      K
Sbjct: 140 FXAFGRMRWMRGWDGSECCGVDVVSLGALVSACAVGCGSNCLRRGSAVHGLVV------K 193

Query: 207 LGVAIAT----ALIDMYSKCGNLAYAKQLFN--RLNQNSVVSWTVMISGYIRCNEINEGV 260
            G  ++T    +++ MYS C ++  A ++FN   + Q  VVSW  +ISG+    E    +
Sbjct: 194 YGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQRDVVSWNSLISGFXLNGEAERAL 253

Query: 261 RLFAEMIEEN---VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA----MA 313
           R F +M+ E    V P+ +T+++L+  C  +G ++   W+H YI        +A    + 
Sbjct: 254 RTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSSWVHEYISSRHSSLLVAKDVVVL 313

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS--- 370
            AL+DM+ +C  +  AR +FDG++ K+V+ W+A+I+ Y Q  C ++A  LF  M +    
Sbjct: 314 TALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAGYEQGSCPEEALRLFRQMLMEGNM 373

Query: 371 ---KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
              +V+PN VT+V +++ C+  GA      +H Y    GL+ D  + +AL+DM AKCGD+
Sbjct: 374 VGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVATGLDQDARIASALIDMCAKCGDI 433

Query: 428 NGAYRLFSE--AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
               ++FSE     R +  W++M+   G+HG G+ AL  F +M   G +PN IT+I +L+
Sbjct: 434 EHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRALELFSEMRTGGYEPNEITYISVLS 493

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
           ACSHAGLV +GKS F+ M    G+ P  +HY C+VDLLGRAG LDEAH +I +MP++ ++
Sbjct: 494 ACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDLLGRAGHLDEAHNVILNMPIKADL 553

Query: 546 IVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVM 605
            +WG+LLAA  LH N  +GEI   +IL ++  + G++VL++N+Y  A RW+DV  +R  +
Sbjct: 554 ALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHHVLLANMYEDAGRWDDVVRMRVEL 613

Query: 606 KEIRVKKEPGFSSVEVNGLVHKFI 629
           +   ++K PG S +E+   V+ F+
Sbjct: 614 RRSGLRKIPGQSFIEIGNEVYSFM 637


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 212/595 (35%), Positives = 333/595 (55%), Gaps = 8/595 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + S++  Y +N +  +AL  Y  M ++G   D FT  +I+KAC+ +    LG+++H   +
Sbjct: 132 WTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVL 191

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+         NALI MY++   ++ A  +F  M  RD++SW +MI G+ + G   EAL 
Sbjct: 192 KSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALC 251

Query: 159 VMREMRFMDIR-PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--VAIATAL 215
             +EM    +  P+E    S+ S  + +   + G+ +H   ++      LG  V    +L
Sbjct: 252 YFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKF----GLGRDVFAGCSL 307

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
            DMY+KCG L+ A+ +F ++ +  +V+W  +I+G+    +  E +  F++M  + + P E
Sbjct: 308 CDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDE 367

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           IT+ SL+  C     L  G  +H YI + G +  + + N L+ MY KC E+R A   F+ 
Sbjct: 368 ITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEE 427

Query: 336 MK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
           M+ + D++ WNA+++A  +    ++ F L   M +S+ RP+ +T+  +L    E  ++E+
Sbjct: 428 MRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEI 487

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G  +H Y  K GL  D  +   L+D+YAKCG +  A+++F   I  D+  W++++ GY  
Sbjct: 488 GNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQ 547

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
            G GEEAL  F  M R  VKPN +TF+G+L ACSH GLV EG  ++  M    G+ P  E
Sbjct: 548 FGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTRE 607

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           H  CMVDLL RAG L+EA   I  M   P+++VW  LLAA K H N  +G+ AA  IL+I
Sbjct: 608 HCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKI 667

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +P N   +VL+ NIYA    W DVA +R +MK+  V+K PG S +EV   +H F 
Sbjct: 668 DPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFF 722



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 151/518 (29%), Positives = 254/518 (49%), Gaps = 11/518 (2%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFM-RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           N  +TS  K    + A+  + F+ +K G  +   T   ++ AC+ +     GK+IH   +
Sbjct: 31  NEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHML 90

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+    D  + N ++ MY +C SL  A+ +FD MP R+VVSW+++I GY + G    ALE
Sbjct: 91  KSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALE 150

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI--ATALI 216
              +M    + P +    S++   + + D+ LG+ +HA V+++    + G  I    ALI
Sbjct: 151 FYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKS----EFGAHIIAQNALI 206

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF-PSE 275
            MY+K   +  A  +F+R+    ++SW  MI+G+ +     E +  F EM+ + V+ P+E
Sbjct: 207 SMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNE 266

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
               S+   C  +   + G+ LH   ++ G    +    +L DMY KC  +  AR +F  
Sbjct: 267 FIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQ 326

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +   D++ WNA+I+ +A      +A   F  M+   + P+E+T+  LL  CT    L  G
Sbjct: 327 IGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQG 386

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGM 454
             +H YI K GL++DV +   L+ MYAKC ++  A   F E     D+  WNA++     
Sbjct: 387 MQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMR 446

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           H   EE       M  S  +P+ IT   +L A +    +  G  V    +   GL     
Sbjct: 447 HDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALK-TGLNCDTS 505

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
               ++DL  + G L  AH++  SM + P+++ W +L+
Sbjct: 506 VTNGLIDLYAKCGSLKTAHKIFDSM-INPDVVSWSSLI 542



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 196/382 (51%), Gaps = 4/382 (1%)

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
           ++S  + +  ++ GK IH  ++++     L   +   +++MY KC +L  A+++F+ + +
Sbjct: 69  LISACSYLRSLEHGKKIHDHMLKSKSHPDL--TLQNHILNMYGKCKSLKDAQKVFDAMPE 126

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
            +VVSWT +I+GY +  +    +  + +M++  V P + T  S+I  C  +G + LG+ L
Sbjct: 127 RNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQL 186

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           HA++L++ F   +   NAL+ MY K   I  A  +F  M ++D++ W ++I+ ++Q    
Sbjct: 187 HAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYE 246

Query: 358 DKAFELFIHMKVSKVR-PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
            +A   F  M    V  PNE     + S C+     E G+ LH    K GL  DV    +
Sbjct: 247 LEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCS 306

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           L DMYAKCG ++ A  +F +    D+  WNA++AG+   G  +EA+ FF  M   G+ P+
Sbjct: 307 LCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPD 366

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
            IT   LL AC+    + +G  V    ++ +GL   +     ++ +  +   L +A    
Sbjct: 367 EITVRSLLCACTSPSELYQGMQV-HGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFF 425

Query: 537 KSMPLRPNMIVWGALLAASKLH 558
           + M    +++ W A+L A   H
Sbjct: 426 EEMRCNADLVSWNAILTACMRH 447



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 159/305 (52%), Gaps = 12/305 (3%)

Query: 256 INEGVRLFAEMIEENVFPSEITILS-LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
            NE ++ F  + ++  F   ++  + LI  C ++  L+ GK +H ++L++     L + N
Sbjct: 43  FNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHMLKSKSHPDLTLQN 102

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
            +++MYGKC+ ++ A+ +FD M  ++V+ W +VI+ Y+Q      A E +  M  S V P
Sbjct: 103 HILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMP 162

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           ++ T   ++  C+  G + +G+ LH ++ K      +I + AL+ MY K   +  A  +F
Sbjct: 163 DQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVF 222

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK-PNGITFIGLLNACSHAGLV 493
           S    RD+  W +M+AG+   G   EAL +F +M   GV  PN   F  + +ACS     
Sbjct: 223 SRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACS----- 277

Query: 494 TEGKSVFDKMVHGLGL---VPKIEHYGC-MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           +  +  + + +HG+ +   + +    GC + D+  + GLL  A  +   +  RP+++ W 
Sbjct: 278 SLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIG-RPDLVAWN 336

Query: 550 ALLAA 554
           A++A 
Sbjct: 337 AIIAG 341



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 161/324 (49%), Gaps = 17/324 (5%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++  +        A+  ++ MR  G   D  T+ ++L AC      + G ++HG
Sbjct: 332 LVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHG 391

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMIRGYHRGGLPE 154
           +  K GLD D  V N L+ MY++C  L  A + F+EM  N D+VSW+ ++    R    E
Sbjct: 392 YINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMRHDQAE 451

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR---NCKDEKLGVAI 211
           E   +++ M     RP  + + +++   A+   +++G  +H   ++   NC       ++
Sbjct: 452 EVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCD-----TSV 506

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
              LID+Y+KCG+L  A ++F+ +    VVSW+ +I GY +     E ++LF  M   +V
Sbjct: 507 TNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDV 566

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA----MANALVDMYGKCREIR 327
            P+ +T + ++  C  VG ++ G  L+  + +   EF +A      + +VD+  +   + 
Sbjct: 567 KPNHVTFVGVLTACSHVGLVEEGWKLYGTMEK---EFGIAPTREHCSCMVDLLARAGCLN 623

Query: 328 SARTLFDGMK-SKDVMIWNAVISA 350
            A      M    D+++W  +++A
Sbjct: 624 EAEGFIHQMAFDPDIVVWKTLLAA 647



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 130/231 (56%), Gaps = 10/231 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++T+ +++++      +   M  +    D  T+  +L A A+ +   +G ++H 
Sbjct: 434 LVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHC 493

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +A+K GL+ D  V+N LI +Y++CGSL +A  +FD M N DVVSWS++I GY + G  EE
Sbjct: 494 YALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEE 553

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA--- 212
           AL++ + MR +D++P+ V  + +++  + V  V+ G  ++  +     +++ G+A     
Sbjct: 554 ALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTM-----EKEFGIAPTREH 608

Query: 213 -TALIDMYSKCGNLAYAKQLFNRLNQN-SVVSWTVMISGYIRCNEINEGVR 261
            + ++D+ ++ G L  A+   +++  +  +V W  +++       ++ G R
Sbjct: 609 CSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKR 659



 Score = 40.4 bits (93), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 71/145 (48%), Gaps = 8/145 (5%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAF 61
           + NG ++L    +C +  +KT  K  + ++INP +  ++SL+  Y +      AL ++  
Sbjct: 506 VTNGLIDL--YAKCGS--LKTAHKI-FDSMINPDVVSWSSLILGYAQFGYGEEALKLFKT 560

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN-GLDGDAYVSNALIQMYSECG 120
           MR+   + ++ T   +L AC+ V +   G +++G   K  G+       + ++ + +  G
Sbjct: 561 MRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLARAG 620

Query: 121 SLVSARYLFDEMP-NRDVVSWSTMI 144
            L  A     +M  + D+V W T++
Sbjct: 621 CLNEAEGFIHQMAFDPDIVVWKTLL 645


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 220/628 (35%), Positives = 347/628 (55%), Gaps = 21/628 (3%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFM 62
           +KN     E  RQC   I                  +N ++  ++ N     A++ Y  M
Sbjct: 76  MKNALDLFENMRQCDTFI------------------WNVMIRGFVDNGLFWDAVDFYHRM 117

Query: 63  RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSL 122
              G   DNFT P ++KAC  +     G+ +HG  IK+GLD D Y+ N+LI MY++ G +
Sbjct: 118 EFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCI 177

Query: 123 VSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLF 182
            SA  +F EMP RD+VSW++MI GY   G    +L   REM+   I+    ++I ++   
Sbjct: 178 ESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGAC 237

Query: 183 ADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVS 242
           +    +  GK IH  ++R+    +L V + T+L+DMY+KCG + YA++LF+++   S+V+
Sbjct: 238 SLEGFLRNGKEIHCQMMRS--RLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVA 295

Query: 243 WTVMISGYIRCNEINEGVRLFAEMIEE-NVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           W  MI GY    +  E      +M E   + P  IT+++L+  C  +  + LGK +H + 
Sbjct: 296 WNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFA 355

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
           +RNGF   L +  ALVDMYG+C +++ A  LF  M  ++++ WNA+I++Y +     KA 
Sbjct: 356 IRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAM 415

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
            LF  +    ++P+  T+  +L    E  +L   + +H Y+ K  L+ +  +  ++V MY
Sbjct: 416 TLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMY 475

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
            KCG++  A  +F    ++D+  WN ++  Y +HG G  ++  F +M   G +PNG TF+
Sbjct: 476 GKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFV 535

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
            LL +CS AGLV EG   F+ M     + P IEHYGC++DL+GR G LD A   I+ MPL
Sbjct: 536 SLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPL 595

Query: 542 RPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGV 601
            P   +WG+LL AS+   +  + EIAA  IL +E  N G  VL+SN+YA A RW DV  +
Sbjct: 596 APTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERI 655

Query: 602 RRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +  MK+  ++K  G S V+++    +F+
Sbjct: 656 KFHMKKEGLEKSVGCSVVDLSSKTFRFV 683



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 232/474 (48%), Gaps = 14/474 (2%)

Query: 113 IQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSE 172
           +  Y E G + +A  LF+ M   D   W+ MIRG+   GL  +A++    M F  +R   
Sbjct: 67  LSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYHRMEFGGVRGDN 126

Query: 173 VAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLF 232
                ++     + D+  G+ +H  V+++  D  L + I  +LI MY+K G +  A+ +F
Sbjct: 127 FTYPFVIKACGGLYDLAEGERVHGKVIKSGLD--LDIYIGNSLIIMYAKIGCIESAEMVF 184

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
             +    +VSW  MISGY+   +    +  F EM    +     +++ ++  C   G L+
Sbjct: 185 REMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLR 244

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
            GK +H  ++R+  E  + +  +LVDMY KC  +  A  LFD +  K ++ WNA+I  Y+
Sbjct: 245 NGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYS 304

Query: 353 QAHCIDKAFELFIHMKV----SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
                 ++FE F +++      K+ P+ +TM+ LL  C +  A+ +GK +H +  + G  
Sbjct: 305 LNA---QSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFL 361

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
             ++L+TALVDMY +CG +  A  LF +   R++  WNAM+A Y  +G   +A+  F D+
Sbjct: 362 PHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDL 421

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
               +KP+  T   +L A +    + E + +    V  L L         +V + G+ G 
Sbjct: 422 CNKTLKPDATTIASILPAYAELASLREAEQIHG-YVTKLKLDSNTFVSNSIVFMYGKCGN 480

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYN 582
           L  A E+   M  + ++I W  ++ A  +H     G I+     E+  + +  N
Sbjct: 481 LLRAREIFDRMTFK-DVISWNTVIMAYAIH---GFGRISIELFSEMREKGFEPN 530



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 180/355 (50%), Gaps = 12/355 (3%)

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
           E+  V++  AL   Y + G +  A  LF  + Q     W VMI G++      + V  + 
Sbjct: 57  ERNSVSLTRAL-SSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYH 115

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
            M    V     T   +I  CG +  L  G+ +H  ++++G +  + + N+L+ MY K  
Sbjct: 116 RMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIG 175

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            I SA  +F  M  +D++ WN++IS Y       ++   F  M+ S ++ +  +++G+L 
Sbjct: 176 CIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGILG 235

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
            C+  G L  GK +H  + +  LE+DV+++T+LVDMYAKCG ++ A RLF +   + I  
Sbjct: 236 ACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVA 295

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
           WNAM+ GY ++    E+  +   M+  G + P+ IT I LL  C+    +  GKS     
Sbjct: 296 WNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKS----- 350

Query: 504 VHGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           VHG     G +P +     +VD+ G  G L  A  +   M  R N+I W A++A+
Sbjct: 351 VHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNER-NLISWNAMIAS 404



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 73/148 (49%), Gaps = 2/148 (1%)

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
           +E + +  T  +  Y + G +  A  LF      D  +WN M+ G+  +G   +A+ F+ 
Sbjct: 56  VERNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWDAVDFYH 115

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRA 526
            ME  GV+ +  T+  ++ AC     + EG+ V  K++   GL   I     ++ +  + 
Sbjct: 116 RMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKS-GLDLDIYIGNSLIIMYAKI 174

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           G ++ A  + + MP+R +++ W ++++ 
Sbjct: 175 GCIESAEMVFREMPVR-DLVSWNSMISG 201


>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 209/603 (34%), Positives = 345/603 (57%), Gaps = 6/603 (0%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           ++  +  +N++++ Y        AL ++  M  +  + D  T+   ++ACA++    LGK
Sbjct: 216 VVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGK 275

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           +IH  AIK     D Y+ NAL+ MYS  GSL S+  LF+ +PNRD   W++MI  Y   G
Sbjct: 276 QIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFG 335

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL-GKAIHACVVRNCKDEKLGVA 210
             EEA+++   M+   ++  E  ++ M+S+  ++A   L GK++HA V+++    ++  +
Sbjct: 336 CHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKS--GMRIDAS 393

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           +  AL+ MY++   +   +++F+R+    ++SW  MI    R     +   LF  M E  
Sbjct: 394 LGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESE 453

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + P+  TI+S++  C  V  L  G+ +H Y++++  E +  +  AL DMY  C +  +AR
Sbjct: 454 IKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATAR 513

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            LF+G   +D++ WNA+I++Y + +   KA  LF H  +S+  PN VT++ +LS  T   
Sbjct: 514 DLFEGCPDRDLISWNAMIASYVKNNQAHKALLLF-HRMISEAEPNSVTIINVLSSFTHLA 572

Query: 391 ALEMGKWLHTYIEKQG--LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
            L  G+ LH Y+ ++G  L +D+ L  A + MYA+CG +  A  +F     R+I  WNAM
Sbjct: 573 TLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAM 632

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +AGYGM+G G +A++ F  M   G +PNG+TF+ +L+ACSH+G +  G  +F  MV    
Sbjct: 633 IAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFN 692

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
           + P++ HY C+VDLL R G +DEA E I SMP+ P+  VW ALL++ + + +    +   
Sbjct: 693 VTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIF 752

Query: 569 TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            ++ ++EP N G  VL+SN+YA A  W +V  +R  +KE  ++K PG S + V   VH F
Sbjct: 753 EKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCF 812

Query: 629 IRG 631
             G
Sbjct: 813 SAG 815



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 162/521 (31%), Positives = 265/521 (50%), Gaps = 13/521 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++          + L+ Y  M   G   +N T+P +LKACA       GK IH    
Sbjct: 21  WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 80

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
              L  D  V  A++  Y +CG +  AR +FD M +RDVV W+ M+ GY   G  EEA+ 
Sbjct: 81  GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 140

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++REM   ++RP+   M++++      +++ LG+ +H   +RN   +     +ATALI  
Sbjct: 141 LVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDS-NPHVATALIGF 199

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y +  ++     LF+ +   ++VSW  MISGY    +  + + LF +M+ + V    +T+
Sbjct: 200 YLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTM 258

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           L  +  C  +G L+LGK +H   ++  F   L + NAL++MY     + S+  LF+ + +
Sbjct: 259 LVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPN 318

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE-AGALEMGKW 397
           +D  +WN++ISAYA   C ++A +LFI M+   V+ +E T+V +LS+C E A  L  GK 
Sbjct: 319 RDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKS 378

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH ++ K G+ +D  L  AL+ MY +   V    ++F      DI  WN M+     +  
Sbjct: 379 LHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTL 438

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE--- 514
             +A   F  M  S +KPN  T I +L AC     +  G+S     +HG  +   IE   
Sbjct: 439 RAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRS-----IHGYVMKHSIEINQ 493

Query: 515 -HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
                + D+    G    A ++ +  P R ++I W A++A+
Sbjct: 494 PLRTALADMYMNCGDEATARDLFEGCPDR-DLISWNAMIAS 533



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 200/369 (54%), Gaps = 9/369 (2%)

Query: 135 RDVVSWSTMIRGYHRGGLPEEA--LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           +D   W+++I+  H+  L  +   L    +M  + + P+   +  ++   A    V+ GK
Sbjct: 16  KDPKHWNSVIK--HQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGK 73

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
           +IH  +     D    V + TA++D Y KCG +  A+ +F+ ++   VV W  M+ GY+ 
Sbjct: 74  SIHRSI--QGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 131

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLA 311
                E + L  EM  EN+ P+  T+++L++ C     L+LG+ +H Y LRNG F+ +  
Sbjct: 132 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPH 191

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           +A AL+  Y +  ++R    LFD M  ++++ WNA+IS Y       KA ELF+ M V +
Sbjct: 192 VATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDE 250

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           V+ + VTM+  +  C E G+L++GK +H    K     D+ +  AL++MY+  G +  ++
Sbjct: 251 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSH 310

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH-A 490
           +LF     RD  +WN+M++ Y   GC EEA+  F+ M+  GVK +  T + +L+ C   A
Sbjct: 311 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA 370

Query: 491 GLVTEGKSV 499
             + +GKS+
Sbjct: 371 SGLLKGKSL 379


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 207/591 (35%), Positives = 344/591 (58%), Gaps = 2/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  ++K  +P+SA+ ++  MR   ++ ++ T  ++L  CA   ++  G ++HG  I
Sbjct: 41  WNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVI 100

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G   D  V+NAL+ MYS+ G L  A  LF+ MP+ +VV+W+ MI G+ + G  +EA  
Sbjct: 101 SCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASL 160

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  EM    + P  +   S +    + A +  GK IH  ++R+     L V + +ALID+
Sbjct: 161 LFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHGYILRH--GIALDVFLKSALIDI 218

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC ++  A ++F +     +V  T +ISGY+     N+ + +F  ++EE + P+ +T+
Sbjct: 219 YFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTL 278

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  L LGK LHA IL++G +    + +A++DMY KC  +  A  +F  M  
Sbjct: 279 ASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPE 338

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WNA+I+  +Q     +A +LF  M    +  + V++   LS C    AL  GK +
Sbjct: 339 KDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAI 398

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H+++ K   + +V  ++AL+DMY KCG+++ A  +F     ++   WN+++A YG HG  
Sbjct: 399 HSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHL 458

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           E +L  F  M   G++P+ +TF+ +L+AC HAG V +G   F  M    G+  ++EHY C
Sbjct: 459 EVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYAC 518

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VDL GRAG L+EA E IK+MP  P+  VWG LL A ++H N  + E+A+  +L+++P+N
Sbjct: 519 IVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVHGNVELAEVASRCLLDLDPEN 578

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            G  VL+SN++A A +W  V  +R +MK+  V+K PG+S +EVN   H F+
Sbjct: 579 SGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSWIEVNKTTHMFV 629



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 153/488 (31%), Positives = 264/488 (54%), Gaps = 6/488 (1%)

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G + D +V ++LI++Y+E G +  AR LFD+MPN+D V W+ M+ G+ + G P  A++V 
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
            +MR    +P+ +   S++S+ A  A  + G  +H  V+ +C        +A AL+ MYS
Sbjct: 62  EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVI-SCGFH-FDPLVANALVAMYS 119

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           K G L+ A +LFN +   +VV+W  MI+G+++   ++E   LF+EMI   V P  IT  S
Sbjct: 120 KFGQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFAS 179

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
            +        L+ GK +H YILR+G    + + +AL+D+Y KCR++  A  +F    + D
Sbjct: 180 FLPSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVD 239

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           +++  A+IS Y      + A E+F  +   K+ PN VT+  +L  C     L +GK LH 
Sbjct: 240 IVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHA 299

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
            I K GL+    + +A++DMYAKCG ++ AY++F     +D   WNA++     +G  +E
Sbjct: 300 NILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQE 359

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           A+  F  M R G+  + ++    L+AC++   +  GK++   M+ G     ++     ++
Sbjct: 360 AIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKG-AFDSEVFAESALI 418

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQN 578
           D+ G+ G L  A   +  M    N + W +++AA   H +  +      ++LE  I+P +
Sbjct: 419 DMYGKCGNLSVA-RCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDH 477

Query: 579 YGYNVLMS 586
             +  ++S
Sbjct: 478 VTFLTILS 485


>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g01580
 gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 207/598 (34%), Positives = 343/598 (57%), Gaps = 6/598 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L ++N+L+ S  +  +    L  ++ M ++  + DNFT+P  LKAC ++   + G+ IHG
Sbjct: 25  LYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHG 84

Query: 96  FAIKN-GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           F  K+  L  D YV ++LI MY +CG ++ A  +FDE+   D+V+WS+M+ G+ + G P 
Sbjct: 85  FVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPY 144

Query: 155 EALEVMREMRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           +A+E  R M    D+ P  V +I++VS    +++  LG+ +H  V+R      L  ++  
Sbjct: 145 QAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL--SLVN 202

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           +L++ Y+K      A  LF  + +  V+SW+ +I+ Y++     E + +F +M+++   P
Sbjct: 203 SLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEP 262

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +  T+L ++  C     L+ G+  H   +R G E  + ++ ALVDMY KC     A  +F
Sbjct: 263 NVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVF 322

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELF-IHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
             +  KDV+ W A+IS +       ++ E F I +  +  RP+ + MV +L  C+E G L
Sbjct: 323 SRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFL 382

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           E  K  H+Y+ K G + +  +  +LV++Y++CG +  A ++F+    +D  +W +++ GY
Sbjct: 383 EQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGY 442

Query: 453 GMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           G+HG G +AL  F  M +S  VKPN +TF+ +L+ACSHAGL+ EG  +F  MV+   L P
Sbjct: 443 GIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAP 502

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
            +EHY  +VDLLGR G LD A E+ K MP  P   + G LL A ++H+N  M E  A ++
Sbjct: 503 NLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKL 562

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            E+E  + GY +LMSN+Y V   W +V  +R  +K+  +KK    S +E+   VH+F+
Sbjct: 563 FELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFV 620



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 170/333 (51%), Gaps = 4/333 (1%)

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A+Q+F  + + S+  W  ++    R  +  E +  F+ M  +   P   T+   +  CG 
Sbjct: 13  ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72

Query: 288 VGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
           +  +  G+ +H ++ ++      L + ++L+ MY KC  +  A  +FD ++  D++ W++
Sbjct: 73  LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132

Query: 347 VISAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
           ++S + +     +A E F  M   S V P+ VT++ L+S CT+     +G+ +H ++ ++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
           G   D+ L  +L++ YAK      A  LF     +D+  W+ ++A Y  +G   EAL+ F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
            DM   G +PN  T + +L AC+ A  + +G+   +  +   GL  +++    +VD+  +
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMK 311

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
               +EA+ +   +P R +++ W AL++   L+
Sbjct: 312 CFSPEEAYAVFSRIP-RKDVVSWVALISGFTLN 343



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 164/351 (46%), Gaps = 45/351 (12%)

Query: 14  RQCHAHIIKTHFKFSYTNIINPLTRYNSLVTS---------------------------- 45
           R  H  +I+  F        N L+  NSL+                              
Sbjct: 183 RCVHGFVIRRGFS-------NDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTV 235

Query: 46  ---YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
              Y++N   + AL ++  M  +G+E +  T+  +L+ACA       G++ H  AI+ GL
Sbjct: 236 IACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGL 295

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
           + +  VS AL+ MY +C S   A  +F  +P +DVVSW  +I G+   G+   ++E    
Sbjct: 296 ETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSI 355

Query: 163 MRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
           M    + RP  + M+ ++   +++  ++  K  H+ V++   D      I  +L+++YS+
Sbjct: 356 MLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS--NPFIGASLVELYSR 413

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN-VFPSEITILS 280
           CG+L  A ++FN +     V WT +I+GY    +  + +  F  M++ + V P+E+T LS
Sbjct: 414 CGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLS 473

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFS--LAMANALVDMYGKCREIRSA 329
           ++  C   G +  G  +   ++ N +  +  L     LVD+ G+  ++ +A
Sbjct: 474 ILSACSHAGLIHEGLRIFK-LMVNDYRLAPNLEHYAVLVDLLGRVGDLDTA 523



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 116/242 (47%), Gaps = 15/242 (6%)

Query: 321 GKCREIRS---ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEV 377
           G CR+  S   AR +F  M  + +  WN ++ + ++    ++    F HM   + +P+  
Sbjct: 2   GFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNF 61

Query: 378 TMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           T+   L  C E   +  G+ +H +++K   L  D+ + ++L+ MY KCG +  A R+F E
Sbjct: 62  TLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDE 121

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDM-ERSGVKPNGITFIGLLNACSHAGLVTE 495
               DI  W++M++G+  +G   +A+ FF  M   S V P+ +T I L++AC+       
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKL----- 176

Query: 496 GKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
             S   + VHG     G    +     +++   ++    EA  + K M    ++I W  +
Sbjct: 177 SNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTV 235

Query: 552 LA 553
           +A
Sbjct: 236 IA 237


>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
          Length = 641

 Score =  401 bits (1031), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 207/598 (34%), Positives = 343/598 (57%), Gaps = 6/598 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L ++N+L+ S  +  +    L  ++ M ++  + DNFT+P  LKAC ++   + G+ IHG
Sbjct: 6   LYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHG 65

Query: 96  FAIKN-GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           F  K+  L  D YV ++LI MY +CG ++ A  +FDE+   D+V+WS+M+ G+ + G P 
Sbjct: 66  FVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPY 125

Query: 155 EALEVMREMRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           +A+E  R M    D+ P  V +I++VS    +++  LG+ +H  V+R      L  ++  
Sbjct: 126 QAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL--SLVN 183

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           +L++ Y+K      A  LF  + +  V+SW+ +I+ Y++     E + +F +M+++   P
Sbjct: 184 SLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEP 243

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +  T+L ++  C     L+ G+  H   +R G E  + ++ ALVDMY KC     A  +F
Sbjct: 244 NVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVF 303

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELF-IHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
             +  KDV+ W A+IS +       ++ E F I +  +  RP+ + MV +L  C+E G L
Sbjct: 304 SRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFL 363

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           E  K  H+Y+ K G + +  +  +LV++Y++CG +  A ++F+    +D  +W +++ GY
Sbjct: 364 EQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGY 423

Query: 453 GMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           G+HG G +AL  F  M +S  VKPN +TF+ +L+ACSHAGL+ EG  +F  MV+   L P
Sbjct: 424 GIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAP 483

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
            +EHY  +VDLLGR G LD A E+ K MP  P   + G LL A ++H+N  M E  A ++
Sbjct: 484 NLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKL 543

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            E+E  + GY +LMSN+Y V   W +V  +R  +K+  +KK    S +E+   VH+F+
Sbjct: 544 FELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFV 601



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 165/326 (50%), Gaps = 4/326 (1%)

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           + + S+  W  ++    R  +  E +  F+ M  +   P   T+   +  CG +  +  G
Sbjct: 1   MTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYG 60

Query: 295 KWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           + +H ++ ++      L + ++L+ MY KC  +  A  +FD ++  D++ W++++S + +
Sbjct: 61  EMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEK 120

Query: 354 AHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
                +A E F  M   S V P+ VT++ L+S CT+     +G+ +H ++ ++G   D+ 
Sbjct: 121 NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLS 180

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           L  +L++ YAK      A  LF     +D+  W+ ++A Y  +G   EAL+ F DM   G
Sbjct: 181 LVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDG 240

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
            +PN  T + +L AC+ A  + +G+   +  +   GL  +++    +VD+  +    +EA
Sbjct: 241 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMKCFSPEEA 299

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLH 558
           + +   +P R +++ W AL++   L+
Sbjct: 300 YAVFSRIP-RKDVVSWVALISGFTLN 324



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 164/351 (46%), Gaps = 45/351 (12%)

Query: 14  RQCHAHIIKTHFKFSYTNIINPLTRYNSLVTS---------------------------- 45
           R  H  +I+  F        N L+  NSL+                              
Sbjct: 164 RCVHGFVIRRGFS-------NDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTV 216

Query: 46  ---YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
              Y++N   + AL ++  M  +G+E +  T+  +L+ACA       G++ H  AI+ GL
Sbjct: 217 IACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGL 276

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
           + +  VS AL+ MY +C S   A  +F  +P +DVVSW  +I G+   G+   ++E    
Sbjct: 277 ETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSI 336

Query: 163 MRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
           M    + RP  + M+ ++   +++  ++  K  H+ V++   D      I  +L+++YS+
Sbjct: 337 MLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS--NPFIGASLVELYSR 394

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN-VFPSEITILS 280
           CG+L  A ++FN +     V WT +I+GY    +  + +  F  M++ + V P+E+T LS
Sbjct: 395 CGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLS 454

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFS--LAMANALVDMYGKCREIRSA 329
           ++  C   G +  G  +   ++ N +  +  L     LVD+ G+  ++ +A
Sbjct: 455 ILSACSHAGLIHEGLRIFK-LMVNDYRLAPNLEHYAVLVDLLGRVGDLDTA 504


>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
 gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Cucumis sativus]
          Length = 693

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 211/593 (35%), Positives = 341/593 (57%), Gaps = 4/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +N+L+++Y  N +   AL ++  +  N     D +T P +LKAC  +     G+ IH   
Sbjct: 73  WNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIHNHL 132

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K GL  D +V ++L+ MY++C   V A  LFDE P RDV  W+ +I  Y + G  E AL
Sbjct: 133 LKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAEMAL 192

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           +   +M+ +   P+ V    +VS    + +++ GK +H  ++   +   L   + +AL+D
Sbjct: 193 KTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIE--RRILLDAFVLSALVD 250

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY KCG L  AK++F ++ + + ++W  MI+GY    +    + L   M +E   P+ +T
Sbjct: 251 MYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLMT 310

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           + S+I        L+ GK++H YILRN  +  + +  +L+D Y KC  + SA T+F  + 
Sbjct: 311 LTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTIS 370

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
             +V+ WN +IS +       +A  ++ +MK   V+P+ +T    LS C++  AL+ G+ 
Sbjct: 371 KNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRE 430

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH  I    LE + I+  AL+DMYAKCGDV+ A +LF +   RD+  W +M+  YG HG 
Sbjct: 431 LHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQ 490

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
             EAL  F +M++  V+ + +TF+ +L+ACSHAGLV EG   F++MV    + P IEHY 
Sbjct: 491 ASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYS 550

Query: 518 CMVDLLGRAGLLDEAHEMI-KSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
           C++DLLGRAG L EA+E++ +S   R ++ +   L +A  LH N  +G      ++E++P
Sbjct: 551 CLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKMLIEVDP 610

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            +    +L+SN+YA  N+W++V  VRR MKE+ +KK PG S +E+N  +H F 
Sbjct: 611 DDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIEINQRIHPFF 663



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 148/284 (52%), Gaps = 4/284 (1%)

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T+LS +  C     L+ GK +H  I   GF+ ++ ++ +L+  Y  C +  SA  +F  
Sbjct: 4   VTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQT 63

Query: 336 MKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKV-SKVRPNEVTMVGLLSLCTEAGALE 393
                DV +WNA++SAY       +A +LF  +   S VRP+  T   +L  C   G + 
Sbjct: 64  NDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVI 123

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            G+ +H ++ K GL  DV + ++L++MYAKC     A +LF E   RD+  WNA+++ Y 
Sbjct: 124 YGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYF 183

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
             G  E AL  F  M+  G +PN +TF  ++++C+    +  GK V  +++    L+   
Sbjct: 184 KDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAF 243

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
                +VD+ G+ G L+ A E+ + +P R N I W A++    L
Sbjct: 244 V-LSALVDMYGKCGCLEMAKEVFEKIP-RKNAITWNAMITGYSL 285



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 130/251 (51%), Gaps = 6/251 (2%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           N +  +N +++ ++       AL+IY  M+++  + D  T  + L AC+Q+     G+E+
Sbjct: 372 NEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGREL 431

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           H   I + L+ +  V  AL+ MY++CG +  AR LF ++P RD+VSW++MI  Y   G  
Sbjct: 432 HYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQA 491

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA-IHACVVRNCKDEKLGVAIA 212
            EAL +  EM+ +++R   V  ++++S  +    VD G    +  VV+   D K G+   
Sbjct: 492 SEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQ--YDIKPGIEHY 549

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQ--NSVVSWTVMISGYIRCNEINEGVRLFAEMIE-E 269
           + LID+  + G L  A ++  R  +  + +   + + S  +  N    G+++   +IE +
Sbjct: 550 SCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKMLIEVD 609

Query: 270 NVFPSEITILS 280
              PS   +LS
Sbjct: 610 PDDPSTYILLS 620



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 104/221 (47%), Gaps = 6/221 (2%)

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-S 435
           VT++  L  CT +  L+ GK +H  I   G + +++L  +L+  Y  C D   A  +F +
Sbjct: 4   VTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQT 63

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME-RSGVKPNGITFIGLLNACSHAGLVT 494
                D+ +WNA+++ Y  +    EAL  F  +   S V+P+  T+  +L AC   G V 
Sbjct: 64  NDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVI 123

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            G+ + + ++   GL+  +     ++++  +     +A ++    P R ++  W A+++ 
Sbjct: 124 YGRRIHNHLLKT-GLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQR-DVGCWNAVISC 181

Query: 555 SKLHKNPSMGEIAATQILEI--EPQNYGYNVLMSNIYAVAN 593
                   M      ++ E+  EP +  + V++S+   + N
Sbjct: 182 YFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLN 222


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 225/638 (35%), Positives = 360/638 (56%), Gaps = 18/638 (2%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSS---ALNIY 59
           + N FLNL       +H + T F     N  + ++ +NSL+ ++ +N+  SS   A++++
Sbjct: 48  VTNTFLNLYAKTNHLSHAL-TLFDSINDNDKDDVS-WNSLINAFSQNHSSSSSSFAISLF 105

Query: 60  A-FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSE 118
              MR N    +  T+  +  A + +     GK+ H  A+K G  GD YV ++L+ MY +
Sbjct: 106 RRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCK 165

Query: 119 CGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISM 178
            G +  AR LFD MP R+ VSW+TMI GY    + ++A+EV   MR  +   +E A+ S+
Sbjct: 166 TGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSV 225

Query: 179 VSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNR 234
           +S       V  G+ +H+  ++N      G    V++A AL+ MY+KCG+L  A + F  
Sbjct: 226 LSALTSDVFVYTGRQVHSLAIKN------GLLAIVSVANALVTMYAKCGSLDDAVRTFEF 279

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
               + ++W+ M++GY +  + ++ ++LF +M    V PSE T++ +I  C  +  +  G
Sbjct: 280 SGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEG 339

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
           K +H++  + GF   L + +A+VDMY KC  +  AR  F+ ++  DV++W ++I+ Y Q 
Sbjct: 340 KQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQN 399

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
              +    L+  M++ +V PNE+TM  +L  C+   AL+ GK +H  I K G +++V + 
Sbjct: 400 GDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIG 459

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
           +AL  MY KCG ++  Y +F     RD+  WNAM++G   +G G +AL  F  M   G+K
Sbjct: 460 SALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIK 519

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
           P+ +TF+ LL+ACSH GLV  G   F  M     + P +EHY CMVD+L RAG L+EA E
Sbjct: 520 PDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKE 579

Query: 535 MIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI-EPQNYGYNVLMSNIYAVAN 593
            I+S  +   + +W  LL A K H+N  +G  A  +++E+  P++  Y VL+S+IY    
Sbjct: 580 FIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAY-VLLSSIYTALG 638

Query: 594 RWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
              +V  VRR+MK   V KEPG S +E+ GLVH F+ G
Sbjct: 639 DRENVERVRRIMKARGVNKEPGCSWIELKGLVHVFVVG 676



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 267/507 (52%), Gaps = 16/507 (3%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM--PNRDVVSWSTMIRGY 147
           G+ +H   +K G     YV+N  + +Y++   L  A  LFD +   ++D VSW+++I  +
Sbjct: 30  GRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAF 89

Query: 148 ---HRGGLPEEALEVMRE-MRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN-C 202
              H       A+ + R  MR  ++ P+   +  + S  ++++DV  GK  H+  V+  C
Sbjct: 90  SQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGC 149

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
             +   V + ++L++MY K G +  A++LF+R+ + + VSW  MISGY   +  ++ V +
Sbjct: 150 SGD---VYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEV 206

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F  M  E    +E  + S++        +  G+ +H+  ++NG    +++ANALV MY K
Sbjct: 207 FELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAK 266

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C  +  A   F+    K+ + W+A+++ YAQ    DKA +LF  M  S V P+E T+VG+
Sbjct: 267 CGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGV 326

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           ++ C++  A+  GK +H++  K G  + + + +A+VDMYAKCG +  A + F      D+
Sbjct: 327 INACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDV 386

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
            +W +++ GY  +G  E  L  +  M+   V PN +T   +L ACS    + +GK +  +
Sbjct: 387 VLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQMHAR 446

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA--ASKLHKN 560
           ++   G   ++     +  +  + G LD+ + +   MP R ++I W A+++  +   H N
Sbjct: 447 IIK-YGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSR-DVISWNAMISGLSQNGHGN 504

Query: 561 PSMGEIAATQILE-IEPQNYGYNVLMS 586
            ++ E+    +LE I+P    +  L+S
Sbjct: 505 KAL-ELFEKMLLEGIKPDPVTFVNLLS 530



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 132/288 (45%), Gaps = 8/288 (2%)

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P    +L  +IEC     +  G+ LHA IL+ G   S+ + N  +++Y K   +  A TL
Sbjct: 9   PQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTL 68

Query: 333 FDGM--KSKDVMIWNAVISAYAQAHCIDK---AFELFIH-MKVSKVRPNEVTMVGLLSLC 386
           FD +    KD + WN++I+A++Q H       A  LF   M+ + V PN  T+ G+ S  
Sbjct: 69  FDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAA 128

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
           +    +  GK  H+   K G   DV + ++L++MY K G V  A +LF     R+   W 
Sbjct: 129 SNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWA 188

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
            M++GY      ++A+  F  M R     N      +L+A +    V  G+ V    +  
Sbjct: 189 TMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKN 248

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            GL+  +     +V +  + G LD+A    +      N I W A++  
Sbjct: 249 -GLLAIVSVANALVTMYAKCGSLDDAVRTFE-FSGDKNSITWSAMVTG 294


>gi|449436034|ref|XP_004135799.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/586 (36%), Positives = 341/586 (58%), Gaps = 7/586 (1%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           N++V  Y++N + +  + +   M +   E D++T    LKAC  +L   +G E+ G A+ 
Sbjct: 124 NAMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVC 183

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
            GL G  ++ ++++    + G ++ A++ F +M  +DVV W+ MI G+ + GL  E   +
Sbjct: 184 KGLAGGRFLGSSILNFLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNL 243

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR--NCKDEKLGVAIATALID 217
             +M +  I PS V MIS++    ++ ++  GK +H  V+     +D +    + T LID
Sbjct: 244 FLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTR----VLTTLID 299

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY K G++  A+ +F  +   ++VSW VMISGY++   + E +RLF ++I ++V     T
Sbjct: 300 MYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGT 359

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++SLI  C     L  GK LH +I R G + +L +  A+VD+Y KC  +  A ++F+ MK
Sbjct: 360 VVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMK 419

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           +K+V+ W A++   AQ      A +LF  M+  +V  N +T+V L+  CT  G L  G+ 
Sbjct: 420 NKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRS 479

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY-RDICMWNAMMAGYGMHG 456
           +H  + +     +V++ TAL+DMYAKC  +N A  +F   +  +D+ ++N+M++GYGMHG
Sbjct: 480 VHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHG 539

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
            G +AL  +  M R G++PN  TF+ LL+ACSH+GLV EG ++F  MV      P  + Y
Sbjct: 540 LGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLY 599

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            C+VDLL RAG L +A E+I  MP  P   +   LL    LHK+  +G   A ++L +E 
Sbjct: 600 ACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLES 659

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
           +N    + +SNIYA A+RW+ V  VR +M E  +KK PG+SS+EVN
Sbjct: 660 RNPSIYITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIEVN 705



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 222/400 (55%), Gaps = 4/400 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  +++        N++  M  N  E    T+ +++++C ++     GK +HGF +
Sbjct: 224 WNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVL 283

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G+  D  V   LI MY + G + SAR++F+ MP+R++VSW+ MI GY + GL  E L 
Sbjct: 284 GFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLR 343

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + +++   D+      ++S++ L +  AD+D GK +H  + R   D  L + + TA++D+
Sbjct: 344 LFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHGFIYRRGLD--LNLVLPTAIVDL 401

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG+LAYA  +F R+   +V+SWT M+ G  +     + ++LF +M  E V  + +T+
Sbjct: 402 YAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTL 461

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD-GMK 337
           +SL+  C  +G L+ G+ +HA + R  F   + +  AL+DMY KC +I SA  +F  G+ 
Sbjct: 462 VSLVYCCTLLGLLREGRSVHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLT 521

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KDV+++N++IS Y       KA  ++  M    ++PNE T V LLS C+ +G +E G  
Sbjct: 522 PKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIA 581

Query: 398 L-HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           L    ++         L   +VD+ ++ G +  A  L ++
Sbjct: 582 LFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELINQ 621



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 241/462 (52%), Gaps = 5/462 (1%)

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           I N + GD ++   L+  YS  G L +AR +FDE+P    V  + M+ GY +     + +
Sbjct: 81  ITNPIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCI 140

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           E+++ M    +          +     + D ++G  +    V  CK    G  + +++++
Sbjct: 141 ELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAV--CKGLAGGRFLGSSILN 198

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
              K G++  A+  F+++ +  VV W VMI G+++     EG  LF +M+   + PS +T
Sbjct: 199 FLVKTGDIMCAQFFFHQMVEKDVVCWNVMIGGFMQEGLFREGYNLFLDMLYNKIEPSAVT 258

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++SLI  CG +  L  GK +H ++L  G      +   L+DMY K  ++ SAR +F+ M 
Sbjct: 259 MISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMP 318

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           S++++ WN +IS Y Q   + +   LF  + +  V  +  T+V L+ LC+    L+ GK 
Sbjct: 319 SRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKI 378

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH +I ++GL+++++L TA+VD+YAKCG +  A  +F     +++  W AM+ G   +G 
Sbjct: 379 LHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGH 438

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
             +AL  F  M+   V  N +T + L+  C+  GL+ EG+SV   +        ++    
Sbjct: 439 ARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTR-FHFASEVVVMT 497

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRP-NMIVWGALLAASKLH 558
            ++D+  +   ++ A EM+    L P ++I++ ++++   +H
Sbjct: 498 ALIDMYAKCSKINSA-EMVFKYGLTPKDVILYNSMISGYGMH 538



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 159/303 (52%), Gaps = 4/303 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N +++ Y++N      L ++  +  +    D+ T+ ++++ C++      GK +HG
Sbjct: 322 LVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHG 381

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F  + GLD +  +  A++ +Y++CGSL  A  +F+ M N++V+SW+ M+ G  + G   +
Sbjct: 382 FIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARD 441

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL++  +M+   +  + + ++S+V     +  +  G+++HA + R     +  V + TAL
Sbjct: 442 ALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASE--VVVMTAL 499

Query: 216 IDMYSKCGNLAYAKQLFNR-LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           IDMY+KC  +  A+ +F   L    V+ +  MISGY      ++ + ++  M  E + P+
Sbjct: 500 IDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPN 559

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLF 333
           E T +SL+  C   G ++ G  L   ++++     +  +   +VD+  +   +R A  L 
Sbjct: 560 ESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELI 619

Query: 334 DGM 336
           + M
Sbjct: 620 NQM 622


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  400 bits (1028), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/596 (36%), Positives = 344/596 (57%), Gaps = 6/596 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y++N   +  + ++  M+  G   D+FT  +IL ACA +    LG ++H   I
Sbjct: 396 WNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVII 455

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KN    + +V NAL+ MY++ G+L  AR  F+ + NRD VSW+ +I GY +     EA  
Sbjct: 456 KNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFH 515

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R M  + I P EV++ S++S  A V  ++ GK +H   V+  ++ KL     ++LIDM
Sbjct: 516 LFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKL--YSGSSLIDM 573

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG +  A ++   + + SVVS   +I+GY + N + + V LF +M+ E +  +EIT 
Sbjct: 574 YAKCGAIDSAHKILACMPERSVVSMNALIAGYAQIN-LEQAVNLFRDMLVEGINSTEITF 632

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA-MANALVDMYGKCREIRSARTLFDGMK 337
            SL+  C     L LG+ +H+ IL+ G +     +  +L+ MY        A  LF    
Sbjct: 633 ASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFS 692

Query: 338 S-KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           + K  ++W A+IS  +Q  C   A +L+  M+   V P++ T V  L  C    +++ G 
Sbjct: 693 NPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGT 752

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
             H+ I   G + D +  +ALVDMYAKCGDV  + ++F E +  +D+  WN+M+ G+  +
Sbjct: 753 ETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKN 812

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  E+AL  F +M++S V P+ +TF+G+L ACSH+G V+EG+ +FD MV+  G+ P+ +H
Sbjct: 813 GYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADH 872

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
             CMVDLLGR G L EA E I  +   P+  VW  +L A ++H +   G+ AA +++E+E
Sbjct: 873 CACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELE 932

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           PQN    VL+SNIYA +  W++V  +RR M+E  VKK PG S + V    + F+ G
Sbjct: 933 PQNSSPYVLLSNIYAASGNWDEVNTLRREMREKGVKKLPGCSWIVVGQETNMFVAG 988



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 165/544 (30%), Positives = 277/544 (50%), Gaps = 22/544 (4%)

Query: 14  RQCHAHIIKTHFK-FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNF 72
           RQ H +++K  F+  SY           +L+  Y K N  + A +I+        E+D  
Sbjct: 180 RQVHCNVVKMGFESISYCE--------GALIGMYAKCNFLTDARSIF----DGAVELDKV 227

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           +  +++    +V +     ++     K G + D      +I  Y + G L +A  LF  M
Sbjct: 228 SWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPDQVAFVTVINAYVDLGRLDNASDLFSRM 287

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           PNR+VV+W+ MI G+ +GG   EA+E  + MR   I+ +   + S++S  A +A +D G 
Sbjct: 288 PNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGL 347

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
            +HA  ++  +     V + ++L+ MY+KCG +  AK++F+ LN+ +VV W  M+ GY++
Sbjct: 348 LVHAEALK--QGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLWNAMLGGYVQ 405

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
               NE + LF  M     +P + T  S++  C  +  L LG  LH+ I++N F  +L +
Sbjct: 406 NGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIKNKFASNLFV 465

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
            NALVDMY K   +  AR  F+ ++++D + WN +I  Y Q     +AF LF  M +  +
Sbjct: 466 GNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGI 525

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR 432
            P+EV++  +LS C     LE GK +H    K G E  +   ++L+DMYAKCG ++ A++
Sbjct: 526 LPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHK 585

Query: 433 LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL 492
           + +    R +   NA++AGY      E+A+  F DM   G+    ITF  LL+AC     
Sbjct: 586 ILACMPERSVVSMNALIAGYAQINL-EQAVNLFRDMLVEGINSTEITFASLLDACHEQQK 644

Query: 493 VTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLG---RAGLLDEAHEMIKSMPLRPNMIVWG 549
           +  G+ +   ++  +GL    E  G  V LLG    +    +A  +        + +VW 
Sbjct: 645 LNLGRQIH-SLILKMGLQLDDEFLG--VSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWT 701

Query: 550 ALLA 553
           A+++
Sbjct: 702 AMIS 705



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 146/515 (28%), Positives = 256/515 (49%), Gaps = 39/515 (7%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++ + K   P   +  +  +  +G   + FT   +L +CA++ M   G+++H   +
Sbjct: 128 WNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVV 187

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G +  +Y   ALI MY++C  L  AR +FD     D VSW++MI GY + GLPEEA++
Sbjct: 188 KMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVK 247

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V +EM  +   P +VA +++++ + D+                                 
Sbjct: 248 VFQEMEKVGQEPDQVAFVTVINAYVDL--------------------------------- 274

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
               G L  A  LF+R+   +VV+W +MISG+ +     E +  F  M +  +  +  T+
Sbjct: 275 ----GRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTL 330

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++     +  L  G  +HA  L+ G   ++ + ++LV MY KC ++ +A+ +FD +  
Sbjct: 331 GSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNE 390

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           ++V++WNA++  Y Q    ++  ELF +MK     P++ T   +LS C     L++G  L
Sbjct: 391 QNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQL 450

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H+ I K     ++ +  ALVDMYAK G +  A + F     RD   WN ++ GY      
Sbjct: 451 HSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDE 510

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EA   F  M   G+ P+ ++   +L+AC+    + +GK V    V   G   K+     
Sbjct: 511 VEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVK-TGQETKLYSGSS 569

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           ++D+  + G +D AH+++  MP R +++   AL+A
Sbjct: 570 LIDMYAKCGAIDSAHKILACMPER-SVVSMNALIA 603



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 131/527 (24%), Positives = 247/527 (46%), Gaps = 58/527 (11%)

Query: 39  YNSLVTSYIKN--NKPSSALN--IYAFMRKN----GSEVDNFTI-PTILKACAQVLMTHL 89
           ++ L  S I N  N PS  L   IY  + +N      +V   ++   I +  +Q   T+ 
Sbjct: 20  HHQLTFSAIPNGSNHPSHTLKPRIYTHILQNCLQKSKQVKTHSLFDEIPQRLSQFSTTN- 78

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
            K IH  ++K G      + N ++ +Y++C  +  A   F ++ ++D+++W++++  + +
Sbjct: 79  -KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSK 137

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
            G P   ++    +    + P+E     ++S  A +  V  G+ +H  VV      K+G 
Sbjct: 138 QGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVV------KMGF 191

Query: 210 AIAT----ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
              +    ALI MY+KC  L  A+ +F+   +   VSWT MI GYI+     E V++F E
Sbjct: 192 ESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQE 251

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M +    P ++  +++I                               NA VD+      
Sbjct: 252 MEKVGQEPDQVAFVTVI-------------------------------NAYVDL----GR 276

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           + +A  LF  M +++V+ WN +IS +A+     +A E F +M+ + ++    T+  +LS 
Sbjct: 277 LDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSA 336

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
                AL+ G  +H    KQGL  +V + ++LV MYAKCG +  A ++F     +++ +W
Sbjct: 337 IASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLW 396

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           NAM+ GY  +G   E +  F +M+  G  P+  T+  +L+AC+    +  G  +   ++ 
Sbjct: 397 NAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIK 456

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
                  +     +VD+  ++G L++A +  + +  R N + W  ++
Sbjct: 457 N-KFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDN-VSWNVII 501


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 208/591 (35%), Positives = 338/591 (57%), Gaps = 2/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y+KN    +A+ I+  MR +  + ++ T   +L  CA   M  LG ++HG A+
Sbjct: 127 WNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAV 186

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             GL+ D+ V+N L+ MYS+C  L +AR LFD +P  D+VSW+ +I GY + GL  EA  
Sbjct: 187 GCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEH 246

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R M    I+P  +   S +    ++  +   K IH  ++R+     L V + +ALID+
Sbjct: 247 LFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAV--VLDVFLKSALIDI 304

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC ++  A++   + +    V  T MISGY+   +  E +  F  +++E + P+ +T 
Sbjct: 305 YFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTF 364

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S+      +  L LGK LH  I++   +    + +A++DMY KC  +  A  +F+ +  
Sbjct: 365 SSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITE 424

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN++I++ +Q     +A  LF  M +   R + V++ G LS C    AL  GK +
Sbjct: 425 KDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEI 484

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + K  L  D+  +++L+DMYAKCG++N + R+F     ++   WN++++ YG HG  
Sbjct: 485 HGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDL 544

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +E L  F +M R+G++P+ +TF+G+++AC HAG V EG   +  M    G+  ++EHY C
Sbjct: 545 KECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYAC 604

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           + D+ GRAG L EA E I SMP  P+  VWG LL A  +H N  + E+A+  + +++P N
Sbjct: 605 VADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLN 664

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            GY VL++N+ A A +W  V  VR +MKE  V+K PG+S +EVN   H F+
Sbjct: 665 SGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSWIEVNNATHMFV 715



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 271/532 (50%), Gaps = 4/532 (0%)

Query: 29  YTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH 88
           YT  +   + +N ++  +    + + AL  Y  M   G   D +T P ++KAC  +    
Sbjct: 16  YTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVK 75

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           +GK +H      GL  D +V ++LI++Y+E G L  A+YLFD +P +D V W+ M+ GY 
Sbjct: 76  MGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVMLNGYV 135

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           + G    A+++  EMR  +I+P+ V    ++S+ A  A +DLG  +H   V  C  E L 
Sbjct: 136 KNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAV-GCGLE-LD 193

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
             +A  L+ MYSKC  L  A++LF+ L Q+ +VSW  +ISGY++   + E   LF  MI 
Sbjct: 194 SPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMIS 253

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
             + P  IT  S +     +  L+  K +H YI+R+     + + +AL+D+Y KCR++  
Sbjct: 254 AGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEM 313

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           A+       S D ++   +IS Y       +A E F  +   +++P  VT   +      
Sbjct: 314 AQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAG 373

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
             AL +GK LH  I K  L+    + +A++DMYAKCG ++ A R+F+    +D   WN+M
Sbjct: 374 LAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSM 433

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +     +G   EA+  F  M   G + + ++  G L+AC++   +  GK +   M+ G  
Sbjct: 434 ITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKG-P 492

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
           L   +     ++D+  + G L+ +  +   M  + N + W ++++A   H +
Sbjct: 493 LRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEK-NEVSWNSIISAYGNHGD 543



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 225/451 (49%), Gaps = 12/451 (2%)

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           MY   GSL  A+ LF  +      +W+ MIRG+   G    AL    +M    + P +  
Sbjct: 1   MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
              +V     +  V +GK +H  V  N    K  V + ++LI +Y++ G+L+ A+ LF+ 
Sbjct: 61  FPYVVKACCGLKSVKMGKIVHETV--NLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDN 118

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           + Q   V W VM++GY++  +    +++F EM    + P+ +T   ++  C     L LG
Sbjct: 119 IPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLG 178

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
             LH   +  G E    +AN L+ MY KC+ +++AR LFD +   D++ WN +IS Y Q 
Sbjct: 179 TQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQN 238

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
             + +A  LF  M  + ++P+ +T    L    E  +L+  K +H YI +  + +DV LK
Sbjct: 239 GLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLK 298

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
           +AL+D+Y KC DV  A +   ++   D  +   M++GY ++G  +EAL  F  + +  +K
Sbjct: 299 SALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMK 358

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE---HYG-CMVDLLGRAGLLD 530
           P  +TF  +  A +    +  GK      +HG  +  K++   H G  ++D+  + G LD
Sbjct: 359 PTSVTFSSIFPAFAGLAALNLGKE-----LHGSIIKTKLDEKCHVGSAILDMYAKCGRLD 413

Query: 531 EAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
            A  +   +  + + I W +++ +   +  P
Sbjct: 414 LACRVFNRITEK-DAICWNSMITSCSQNGRP 443


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/499 (40%), Positives = 302/499 (60%), Gaps = 7/499 (1%)

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD---IRPSEVAMISMVSLFADVADVD 189
           P R   S++ +IR + R G PE+AL +  EM  +D   + P +  + + V   + + D+ 
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEM--LDDTAVSPDQHTVANTVKSCSRMCDLS 188

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
           +G+ + A   +  +   +   +  +LI MY+ CG++  A  LF+ +    V++W  MI+G
Sbjct: 189 VGRGVQAYAFK--RGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAG 246

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
           Y++  +  E V +F  M+E      E+T+LS+   CG +G   LG+W+  Y    G   S
Sbjct: 247 YVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRS 306

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
             +A ALVDMY KC E+  AR LFD M S+DV+ W+A+IS Y Q+    +A  +F  M+ 
Sbjct: 307 RNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQG 366

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
           ++V PN+VTMV +LS C   GALE GKW+H+YI ++ L + VIL TALVD YAKCG +  
Sbjct: 367 TEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKD 426

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A + F     R+   W A++ G   +G   EAL  F  M  + ++P  +TFIG+L ACSH
Sbjct: 427 AVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSH 486

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
             LV EG+  F  M    G+ P+IEHYGCMVDLLGRAGL+DEA++ I++MP+ PN +VW 
Sbjct: 487 GCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWR 546

Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR 609
           ALL+A  +HKN  +GE A  QI+ ++P + G  +L+SN YA   +W + A VR+ MKE  
Sbjct: 547 ALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKG 606

Query: 610 VKKEPGFSSVEVNGLVHKF 628
           V+K PG S +E+ G + +F
Sbjct: 607 VEKIPGCSLIELEGTIFEF 625



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 238/441 (53%), Gaps = 16/441 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           YN L+ S+++   P  AL+++  M  + +   D  T+   +K+C+++    +G+ +  +A
Sbjct: 138 YNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYA 197

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
            K G   D +V N+LI MY+ CG +V+A  LF  +  + V++W+ MI GY + G  +E +
Sbjct: 198 FKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVV 257

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IAT 213
           E+ + M  +     EV ++S+ +    + D +LG+ I          E+ G+     +AT
Sbjct: 258 EMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYA------EEKGMLRSRNLAT 311

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMY+KCG L  A++LF+R++   VV+W+ MISGY + +   E + +F EM    V P
Sbjct: 312 ALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNP 371

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +++T++S++  C  +G L+ GKW+H+YI R     ++ +  ALVD Y KC  I+ A   F
Sbjct: 372 NDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAF 431

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + M  ++   W A+I   A      +A ELF  M  + + P +VT +G+L  C+    +E
Sbjct: 432 ESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGCLVE 491

Query: 394 MGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAG 451
            G+   T + +  G+   +     +VD+  + G ++ AY+      I  +  +W A+++ 
Sbjct: 492 EGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSA 551

Query: 452 YGMHG---CGEEALIFFVDME 469
             +H     GEEAL   V ++
Sbjct: 552 CTVHKNVEIGEEALKQIVPLD 572



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 187/377 (49%), Gaps = 36/377 (9%)

Query: 20  IIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILK 79
           ++  H  F +T  +  +  +N+++  Y+KN      + ++  M +  +  D  T+ ++  
Sbjct: 222 VVAAHVLF-HTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVAT 280

Query: 80  ACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVS 139
           AC ++   +LG+ I  +A + G+     ++ AL+ MY++CG L  AR LFD M +RDVV+
Sbjct: 281 ACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVA 340

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           WS MI GY +     EAL +  EM+  ++ P++V M+S++S  A +  ++ GK +H+ + 
Sbjct: 341 WSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIR 400

Query: 200 RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
           R  KD  L V + TAL+D Y+KCG +  A + F  +   +  +WT +I G        E 
Sbjct: 401 R--KDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIKGMASNGRSREA 458

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
           + LF+ M+E N+ P+++T + +++ C            H  ++  G     +M       
Sbjct: 459 LELFSSMLEANIEPTDVTFIGVLLACS-----------HGCLVEEGRRHFTSMTQD---- 503

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
           YG C  I                 +  ++    +A  ID+A++   +M +    PN V  
Sbjct: 504 YGICPRIEH---------------YGCMVDLLGRAGLIDEAYQFIRNMPIE---PNAVVW 545

Query: 380 VGLLSLCTEAGALEMGK 396
             LLS CT    +E+G+
Sbjct: 546 RALLSACTVHKNVEIGE 562


>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
 gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 228/655 (34%), Positives = 352/655 (53%), Gaps = 30/655 (4%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTNIINPLTR-------------------------YNSLV 43
           +L++ +  HAHIIK  +  S   + N L +                         YN L+
Sbjct: 22  SLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLI 81

Query: 44  TSYIKNNKPSS--ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL-GKEIHGFAIKN 100
                N    S   L ++  M  N    D  T P +  A A  L  +   +++H   IK 
Sbjct: 82  HGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKT 141

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
               D +V ++L+  Y + G +  AR LFD MP R++VSW+TMI GY    + +EAL V 
Sbjct: 142 ASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVF 201

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
             MR ++   +E    S++S       VD GK +H  VV+N   E   V++  AL+ MY+
Sbjct: 202 GLMRLVEGNLNEFVFTSVLSALVCPEFVDSGKQVHCVVVKNGVLE--FVSVLNALVTMYA 259

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           KCGNL Y+  LF   +  + ++W+ +I+GY +  + ++ ++LF++M      PSE T++ 
Sbjct: 260 KCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVG 319

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           ++  C  V  ++ GK  H Y+L++G+E  +  A ALVDMY K      AR  FD +   D
Sbjct: 320 VLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPD 379

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           +++W ++I+ Y Q    ++A  ++  M++ K+ PNE+TM  +L  C+   ALE GK +H 
Sbjct: 380 LVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHA 439

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
              K GL  ++ +++AL  MYAKCG +     +F   + RDI  WNAM++G   +G G E
Sbjct: 440 RTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGRE 499

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           AL  F +M   G KP+ ITF+ +L+ACSH G+V  G + F+ M     LVP++EHY CMV
Sbjct: 500 ALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHYACMV 559

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYG 580
           D+L RAG L+EA E I+S  +   M +W  LL A + H N  +G  A  +++E+  +   
Sbjct: 560 DVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKLMELGSRESS 619

Query: 581 YNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
             VL+S+IY    R  DV  VRR+MK   V+KE G S +E+   VH F+ G  ++
Sbjct: 620 AYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGCSWIELKSHVHVFVVGDQIH 674


>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Cucumis sativus]
 gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 208/598 (34%), Positives = 333/598 (55%), Gaps = 4/598 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           ++ LT +NS +   +     S AL ++  ++ NG + +NFT P + KACA++      + 
Sbjct: 14  LSTLTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQI 73

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IH   +K+    D YV  A++ MY +CG +  A  LFD+MP R++ SW+ MI G+ + G 
Sbjct: 74  IHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGS 133

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            +    +   MR +  RP    +I +         +   KA+HA  +    D     +++
Sbjct: 134 LDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDAD--TSVS 191

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQN--SVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
              I  YSKCG L  AK +F+ + +   S VSW  +I+ Y    +  + V+ +  ++ + 
Sbjct: 192 NTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDG 251

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
             P   TI+SL+  C     L  G  +H +  + G +  +++ N L+ MY +C +I SA 
Sbjct: 252 FKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSAT 311

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            LFDGM  +  + W A+IS Y++   +D A  LF  M+ +  +P+ VT++ L+S C + G
Sbjct: 312 ILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTG 371

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           AL +G W+  Y     L+ DV++  AL+DMYAKCG +N A  +F     R +  W AM+A
Sbjct: 372 ALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIA 431

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
              ++G   EAL  F  +  SG++PN ITF+ +L AC H G + +G+  F  M    G+ 
Sbjct: 432 ACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGRECFMMMTERYGIN 491

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           P ++HY CM+DLLGR G L EA E+I+ MP++P+  +WGALL A K+H N  +GE  +  
Sbjct: 492 PGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHNNMEIGEYVSRY 551

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           + E++P+     V M+NIYA   RW++VA +R+ M+  +++K PG S V+VNG+ H F
Sbjct: 552 LFELQPRVAVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVVQVNGMSHVF 609


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  400 bits (1027), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/539 (37%), Positives = 316/539 (58%), Gaps = 35/539 (6%)

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           +F+ +   +++ W+TM+RG+     P  ALE+   M  +   P+  +   ++   A    
Sbjct: 20  VFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKA 79

Query: 188 VDLGKAIHACVVR-NCKDEKL----------------------------GVAIATALIDM 218
            + G+ IHA V++  C  ++                              V   TALI  
Sbjct: 80  FEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITG 139

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+  G+   A+++F+ + +  VVSW  MI+GY+      E + LF EM+  NV P E T+
Sbjct: 140 YASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTL 199

Query: 279 LSLIIECGFVGGLQLGKWLHAYILR----NGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           +S++  C   G ++LG+ +H+++      +GF  SL + NAL+D+Y KC ++ +A  LF+
Sbjct: 200 VSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFE 259

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
           G+  KDV+ WN +I  Y   +   +A  LF  M  S   PN+VT++ +L  C   GA+++
Sbjct: 260 GLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDI 319

Query: 395 GKWLHTYIEKQ--GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           G+W+H YI+K+  G+  +  L+T+L+DMYAKCGD+  A+++F+  +YR +  WNAM+ G+
Sbjct: 320 GRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGF 379

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
            MHG    A   F  M  + V+P+ ITF+GLL+ACSH+GL+  G+ +F  M     L PK
Sbjct: 380 AMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPK 439

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           +EHYGCM+DLLG +GL  EA EMI +MP+ P+ ++W +LL A K H N  + E  A +++
Sbjct: 440 LEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLI 499

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +IEP+N G  VL+SNIYA A RW DVA VR V+    +KK PG SS+EV+ +VH+FI G
Sbjct: 500 KIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVVHEFIIG 558



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 160/512 (31%), Positives = 259/512 (50%), Gaps = 69/512 (13%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  I  P L  +N+++  +  ++ P SAL +Y  M   G   ++++ P +LK+CA+    
Sbjct: 21  FETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKSCAKSKAF 80

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSE---------------------CGSLV--- 123
             G++IH   +K G   D YV  +LI MY+                      C +L+   
Sbjct: 81  EEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSCTALITGY 140

Query: 124 -------SARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMI 176
                  SAR +FDE+  RDVVSW+ MI GY   G  EEALE+ +EM   ++RP E  ++
Sbjct: 141 ASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLV 200

Query: 177 SMVSLFADVADVDLGKAIHACVVRNCKDEKL--GVAIATALIDMYSKCGNLAYAKQLFNR 234
           S+VS  A    ++LG+ +H+ V  +  D      + I  ALID+YSKCG++  A  LF  
Sbjct: 201 SVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEG 260

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           L+   VVSW  +I GY   N   E + LF EM+     P+++T+LS++  C  +G + +G
Sbjct: 261 LSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIG 320

Query: 295 KWLHAYILR--NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
           +W+H YI +   G     ++  +L+DMY KC +I +A  +F+ M  + +  WNA+I  +A
Sbjct: 321 RWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFA 380

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
                + AF+LF  M+ ++V P+++T VGLLS C+ +G L++G+ +      + +  D  
Sbjct: 381 MHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIF-----KSMTQDYN 435

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           L T  ++ Y    D+ G   LF EA                      E +I  + ME   
Sbjct: 436 L-TPKLEHYGCMIDLLGHSGLFKEA----------------------EEMIHTMPME--- 469

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
             P+G+ +  LL AC   G +   +S   K++
Sbjct: 470 --PDGVIWCSLLKACKKHGNLELAESFAQKLI 499



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 198/402 (49%), Gaps = 43/402 (10%)

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           L YA  +F  + + +++ W  M+ G+   ++    + ++  M+     P+  +   L+  
Sbjct: 14  LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK---------------------C 323
           C      + G+ +HA +L+ G      +  +L+ MY +                     C
Sbjct: 74  CAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSC 133

Query: 324 R----------EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
                      + RSAR +FD +  +DV+ WNA+I+ Y +    ++A ELF  M  + VR
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVR 193

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYI----EKQGLEVDVILKTALVDMYAKCGDVNG 429
           P+E T+V ++S C ++G++E+G+ +H+++    +  G    + +  AL+D+Y+KCGDV  
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVET 253

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A+ LF     +D+  WN ++ GY      +EAL+ F +M RSG  PN +T + +L AC+H
Sbjct: 254 AFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAH 313

Query: 490 AGLVTEGKSV---FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
            G +  G+ +    DK +   G+  +      ++D+  + G ++ AH++  SM  R ++ 
Sbjct: 314 LGAIDIGRWIHVYIDKKLK--GVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYR-SLS 370

Query: 547 VWGALLAASKLH--KNPSMGEIAATQILEIEPQNYGYNVLMS 586
            W A++    +H   N +    +  +   +EP +  +  L+S
Sbjct: 371 SWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLS 412



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 186/362 (51%), Gaps = 9/362 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++T Y++N +   AL ++  M +     D  T+ +++ ACAQ     LG+++H +  
Sbjct: 164 WNAMITGYVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVD 223

Query: 99  K----NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
                +G      + NALI +YS+CG + +A  LF+ +  +DVVSW+T+I GY    L +
Sbjct: 224 DDDDDHGFSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYK 283

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           EAL + +EM      P++V ++S++   A +  +D+G+ IH  + +  K      ++ T+
Sbjct: 284 EALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTS 343

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LIDMY+KCG++  A Q+FN +   S+ SW  MI G+      N    LF+ M    V P 
Sbjct: 344 LIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPD 403

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLF 333
           +IT + L+  C   G L LG+ +   + ++      L     ++D+ G     + A  + 
Sbjct: 404 DITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMI 463

Query: 334 DGMK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP-NEVTMVGLLSLCTEAGA 391
             M    D +IW +++ A  +   ++ A E F   K+ K+ P N  + V L ++   AG 
Sbjct: 464 HTMPMEPDGVIWCSLLKACKKHGNLELA-ESFAQ-KLIKIEPENSGSYVLLSNIYATAGR 521

Query: 392 LE 393
            E
Sbjct: 522 WE 523


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/593 (34%), Positives = 328/593 (55%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL++   +      AL ++  M+++  + D  T+ ++L ACA       G+++H + I
Sbjct: 282 FNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVI 341

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+  D  V  AL+ +Y  C  + +A  +F      +VV W+ M+  + +     E+  
Sbjct: 342 KAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFR 401

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R+M+   + P++    S++     V  +DLG+ IH  V++     +  V + + LIDM
Sbjct: 402 IFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKT--GFQFNVYVCSVLIDM 459

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G L  A  +   L ++ VVSWT +ISGY + N   E ++ F EM+   +    I  
Sbjct: 460 YAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGF 519

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S I  C  +  L  G+ +HA    +G+   L++ NALV +Y +C  I+ A   F+ + +
Sbjct: 520 SSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDA 579

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN +IS +AQ+   + A ++F  M  +K+  +  T    +S       ++ GK +
Sbjct: 580 KDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQI 639

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I K+G + D+ +  AL+  YAKCG +  A R F E   ++   WNAM+ GY  HG G
Sbjct: 640 HAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYG 699

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EA+  F  M++ G  PN +TF+G+L+ACSH GLVT+G   F+ M    GLVPK  HY C
Sbjct: 700 NEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYAC 759

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VDL+ RAG L  A + I+ MP+ P+  +W  LL+A  +HKN  +GE AA  +LE+EP++
Sbjct: 760 VVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPED 819

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VL+SN+YAV+ +W+     R++M+   VKKEPG S +EV   VH F  G
Sbjct: 820 SATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVHAFYVG 872



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 274/516 (53%), Gaps = 5/516 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACA-QVLMTHLGKEIHGFA 97
           ++ +++ +++    +  L++++ M +        +  ++L+AC+   +     ++IH   
Sbjct: 79  WDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARI 138

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           I +GL     +SN LI +Y++ G ++SAR +FD +  +D VSW  MI G+ + G  EEA+
Sbjct: 139 ICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAI 198

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            +  EM    I P+     S++S    +   D+G+ +HA V +      L   +  AL+ 
Sbjct: 199 HLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFK--YGSSLETYVCNALVT 256

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           +YS+  N   A+++F+++     VS+  +ISG  +    +  + LF +M  + + P  +T
Sbjct: 257 LYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVT 316

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           + SL+  C   G L  G+ LH+Y+++ G    + +  AL+D+Y  C +I++A  +F   +
Sbjct: 317 VASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQ 376

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           +++V++WN ++ A+ +   + ++F +F  M++  + PN+ T   +L  CT  GAL++G+ 
Sbjct: 377 TENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQ 436

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +HT + K G + +V + + L+DMYAK G ++ A+ +       D+  W A+++GY  H  
Sbjct: 437 IHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNL 496

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
             EAL  F +M   G++ + I F   ++AC+    + +G+ +  +  +  G    +    
Sbjct: 497 FAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQS-YVSGYSEDLSIGN 555

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            +V L  R G + EA+   + +  + + I W  L++
Sbjct: 556 ALVSLYARCGRIKEAYLEFEKIDAK-DSISWNGLIS 590



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 136/469 (28%), Positives = 241/469 (51%), Gaps = 5/469 (1%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           K++HG  +K G   ++ + N L+ +Y   G L     +F++MPNR V SW  +I G+   
Sbjct: 30  KKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEK 89

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMV-SLFADVADVDLGKAIHACVVRNCKDEKLGV 209
            +    L++   M   ++ P+E++  S++ +       +   + IHA ++  C       
Sbjct: 90  KMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARII--CHGLLCSP 147

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            I+  LI +Y+K G +  A+++F+ L     VSW  MISG+ +     E + LF EM   
Sbjct: 148 IISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTA 207

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            +FP+     S++  C  +    +G+ LHA + + G      + NALV +Y +     SA
Sbjct: 208 GIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSA 267

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             +F  M+SKD + +N++IS  AQ    D A ELF  MK   ++P+ VT+  LLS C   
Sbjct: 268 EKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASN 327

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           GAL  G+ LH+Y+ K G+  D+I++ AL+D+Y  C D+  A+ +F  A   ++ +WN M+
Sbjct: 328 GALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVML 387

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
             +G      E+   F  M+  G+ PN  T+  +L  C+  G +  G+ +  +++   G 
Sbjct: 388 VAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIK-TGF 446

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
              +     ++D+  + G LD AH +++++    +++ W AL++    H
Sbjct: 447 QFNVYVCSVLIDMYAKHGKLDTAHVILRTLT-EDDVVSWTALISGYAQH 494



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 221/437 (50%), Gaps = 4/437 (0%)

Query: 21  IKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA 80
           IKT  +   T     +  +N ++ ++ K +  S +  I+  M+  G   + FT P+IL+ 
Sbjct: 365 IKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRT 424

Query: 81  CAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSW 140
           C  V    LG++IH   IK G   + YV + LI MY++ G L +A  +   +   DVVSW
Sbjct: 425 CTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSW 484

Query: 141 STMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR 200
           + +I GY +  L  EAL+  +EM    I+   +   S +S  A +  ++ G+ IHA    
Sbjct: 485 TALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYV 544

Query: 201 NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
           +   E L  +I  AL+ +Y++CG +  A   F +++    +SW  +ISG+ +     + +
Sbjct: 545 SGYSEDL--SIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDAL 602

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
           ++FA+M    +  S  T  S +     +  ++ GK +HA I++ GF+  + ++NAL+  Y
Sbjct: 603 KVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFY 662

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
            KC  I  AR  F  M  K+ + WNA+I+ Y+Q    ++A  LF  MK     PN VT V
Sbjct: 663 AKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFV 722

Query: 381 GLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AI 438
           G+LS C+  G +  G  +  +  ++ GL         +VD+ ++ G ++ A +   E  I
Sbjct: 723 GVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPI 782

Query: 439 YRDICMWNAMMAGYGMH 455
             D  +W  +++   +H
Sbjct: 783 EPDATIWRTLLSACTVH 799



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 178/367 (48%), Gaps = 28/367 (7%)

Query: 10  LEQTRQCHAHIIKTHFKFS----------YTN---------IINPLTR-----YNSLVTS 45
           L+   Q H  +IKT F+F+          Y           I+  LT      + +L++ 
Sbjct: 431 LDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISG 490

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
           Y ++N  + AL  +  M   G + DN    + + ACA +   + G++IH  +  +G   D
Sbjct: 491 YAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSED 550

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
             + NAL+ +Y+ CG +  A   F+++  +D +SW+ +I G+ + G  E+AL+V  +M  
Sbjct: 551 LSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNR 610

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
             +  S     S VS  A++A++  GK IHA +++   D    + ++ ALI  Y+KCG++
Sbjct: 611 AKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSD--IEVSNALITFYAKCGSI 668

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
             A++ F  + + + VSW  MI+GY +    NE V LF +M +    P+ +T + ++  C
Sbjct: 669 EDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSAC 728

Query: 286 GFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMI 343
             VG +  G  +  +    +G     A    +VD+  +   +  AR   + M    D  I
Sbjct: 729 SHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATI 788

Query: 344 WNAVISA 350
           W  ++SA
Sbjct: 789 WRTLLSA 795



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 1/224 (0%)

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T + L+  C   G L   K LH  IL+ GF     + N LVD+Y    ++     +F+ M
Sbjct: 12  TYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDM 71

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT-EAGALEMG 395
            ++ V  W+ +IS + +    ++  +LF  M    V P E++   +L  C+     +   
Sbjct: 72  PNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYA 131

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H  I   GL    I+   L+ +YAK G +  A ++F     +D   W AM++G+  +
Sbjct: 132 EQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQN 191

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           G  EEA+  F +M  +G+ P    F  +L+ C+   L   G+ +
Sbjct: 192 GYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQL 235



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 89/181 (49%), Gaps = 5/181 (2%)

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           N  T + LL LC  +G+L   K LH  I K G   + +L   LVD+Y   GD++G  ++F
Sbjct: 9   NCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVF 68

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS-HAGLV 493
            +   R +  W+ +++G+         L  F  M    V P  I+F  +L ACS H   +
Sbjct: 69  EDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGI 128

Query: 494 TEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
              + +  +++ HGL   P I +   ++ L  + GL+  A ++  ++  + + + W A++
Sbjct: 129 RYAEQIHARIICHGLLCSPIISNP--LIGLYAKNGLIISARKVFDNLCTK-DSVSWVAMI 185

Query: 553 A 553
           +
Sbjct: 186 S 186



 Score = 43.1 bits (100), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 28/163 (17%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTNIINPLTRY-------------------------NSLV 43
           N++Q +Q HA IIK  F  S   + N L  +                         N+++
Sbjct: 632 NIKQGKQIHAMIIKRGFD-SDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMI 690

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV-LMTHLGKEIHGFAIKNGL 102
           T Y ++   + A+N++  M++ G   ++ T   +L AC+ V L+T         + ++GL
Sbjct: 691 TGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGL 750

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMI 144
                    ++ + S  G L  AR   +EMP   D   W T++
Sbjct: 751 VPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLL 793


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 218/603 (36%), Positives = 345/603 (57%), Gaps = 3/603 (0%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           F   N  N +  +NS++++Y  N +   AL ++  M+K G   + +T+   L+AC     
Sbjct: 68  FDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSF 127

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
             LG EIH   +K+    D YV+NAL+ M+   G +  A  +FDE+  +D ++W++MI G
Sbjct: 128 KKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDNITWNSMIAG 187

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           + + GL  EAL+    ++  +++P EV++IS+++    +  +  GK IHA  ++N  D  
Sbjct: 188 FTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSN 247

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
           L   I   LIDMYSKC  +AYA  +F+++    ++SWT +I+ Y + N   E ++L  ++
Sbjct: 248 L--RIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKV 305

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
             + +    + I S ++ C  +  L   K +H Y L+ G    L M N ++D+Y  C  I
Sbjct: 306 QTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNI 364

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             A  +F+ +K KDV+ W ++IS Y      ++A  +F  MK + V P+ +T+V +LS  
Sbjct: 365 NYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAA 424

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
               AL  GK +H +I ++G  ++     +LVDMYA CG +  AY++F     + + +W 
Sbjct: 425 ASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWT 484

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
            M+  YGMHG G+ A+  F  ME   + P+ ITF+ LL ACSH+GL+ EGK + + M   
Sbjct: 485 TMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCK 544

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
             L P  EHY C+VDLLGRA  L+EA+  +KSM + P   VW A L A ++H N  +GEI
Sbjct: 545 YQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEI 604

Query: 567 AATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVH 626
           AA ++L+++P + G  VL+SN++A + RW DV  VR  MK   +KK PG S +EV   VH
Sbjct: 605 AAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVH 664

Query: 627 KFI 629
            F+
Sbjct: 665 TFL 667



 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 158/502 (31%), Positives = 282/502 (56%), Gaps = 14/502 (2%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           MR  G   D+FT P +LKAC  V   H G EIHG  IK G D   +V+N+L+ MY++C  
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60

Query: 122 LVSARYLFDEMPNR-DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
           ++ AR LFD M  R DVVSW+++I  Y   G   EAL + REM+   +  +   +++ + 
Sbjct: 61  ILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQ 120

Query: 181 LFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
              D +   LG  IHA ++++  ++ L V +A AL+ M+ + G ++YA ++F+ L++   
Sbjct: 121 ACEDSSFKKLGMEIHAAILKS--NQVLDVYVANALVAMHVRFGKMSYAARIFDELDEKDN 178

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           ++W  MI+G+ +    NE ++ F  + + N+ P E++++S++   G +G L  GK +HAY
Sbjct: 179 ITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAY 238

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
            ++N  + +L + N L+DMY KC  +  A  +FD M +KD++ W  VI+AYAQ +C  +A
Sbjct: 239 AMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEA 298

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
            +L   ++   +  + + +   L  C+    L   K +H Y  K+GL  D++++  ++D+
Sbjct: 299 LKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDV 357

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           YA CG++N A R+F     +D+  W +M++ Y  +G   EAL  F  M+ + V+P+ IT 
Sbjct: 358 YADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITL 417

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
           + +L+A +    + +GK      +HG     G + +      +VD+    G L+ A+++ 
Sbjct: 418 VSILSAAASLSALNKGKE-----IHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVF 472

Query: 537 KSMPLRPNMIVWGALLAASKLH 558
                + ++++W  ++ A  +H
Sbjct: 473 ICTRSK-SLVLWTTMINAYGMH 493


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/558 (38%), Positives = 334/558 (59%), Gaps = 19/558 (3%)

Query: 84  VLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR-DVVSWST 142
           +   H   +  GF+ +  +   A     L + YS   +L +   LF++  ++ +V SW++
Sbjct: 70  IFPEHTAFQFSGFSKRRSICAGA----VLRRRYSNNPNLTT---LFNKYVDKTNVFSWNS 122

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           +I    R G   EAL     MR + ++P+       +   + + D+  G+  H   +   
Sbjct: 123 VIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFG 182

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
            +  L V+  +AL+DMYSKCG L  A+ LF+ ++  ++VSWT MI+GY++ ++ +  + L
Sbjct: 183 FEPDLFVS--SALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLL 240

Query: 263 FAE-MIEEN-------VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
           F E ++EE+       V    I ++S++  C  V    + + +H ++++ GFE  L + N
Sbjct: 241 FKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVEN 300

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM-KVSKVR 373
            L+D Y KC E+  +R +FDGM  +DV+ WN++I+ YAQ     ++ E+F  M K  ++ 
Sbjct: 301 TLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEIN 360

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
            N VT+  +L  C  +G+  +GK +H  + K GLE +V + T+++DMY KCG V  A + 
Sbjct: 361 YNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKA 420

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F     +++  W+AM+AGYGMHG  +EAL  F +M  +GVKPN ITF+ +L ACSHAGL+
Sbjct: 421 FDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLL 480

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            EG   F  M H   + P +EHYGCMVDLLGRAG L EA ++IK M LRP+ +VWGALL 
Sbjct: 481 EEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLG 540

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           A ++HKN  +GEI+A ++ E++P+N GY VL+SNIYA A RW DV  +R +MK   + K 
Sbjct: 541 ACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKP 600

Query: 614 PGFSSVEVNGLVHKFIRG 631
           PGFS V++ G VH F+ G
Sbjct: 601 PGFSLVDIKGRVHVFLVG 618



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 240/439 (54%), Gaps = 16/439 (3%)

Query: 29  YTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH 88
           Y +  N  + +NS++    ++     AL  ++ MRK   + +  T P  +K+C+ +L  H
Sbjct: 111 YVDKTNVFS-WNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLH 169

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
            G++ H  A+  G + D +VS+AL+ MYS+CG L  AR LFDE+ +R++VSW++MI GY 
Sbjct: 170 SGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYV 229

Query: 149 RGGLPEEALEVMREMRFMDIRPSE---------VAMISMVSLFADVADVDLGKAIHACVV 199
           +      AL + +E   ++   SE         +AM+S++S  + V++  + + +H  ++
Sbjct: 230 QNDDAHRALLLFKEF-LVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLI 288

Query: 200 RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
           +   +  LGV     L+D Y+KCG L  ++++F+ + +  V+SW  +I+ Y +     E 
Sbjct: 289 KRGFEGDLGV--ENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTES 346

Query: 260 VRLFAEMIEE-NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
           + +F  M+++  +  + +T+ ++++ C   G  +LGK +H  +++ G E ++ +  +++D
Sbjct: 347 MEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIID 406

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
           MY KC ++  AR  FD M+ K+V  W+A+++ Y       +A E+F  M ++ V+PN +T
Sbjct: 407 MYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYIT 466

Query: 379 MVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
            V +L+ C+ AG LE G  W      +  +E  V     +VD+  + G +  A+ L    
Sbjct: 467 FVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGM 526

Query: 438 IYR-DICMWNAMMAGYGMH 455
             R D  +W A++    MH
Sbjct: 527 KLRPDFVVWGALLGACRMH 545


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 227/644 (35%), Positives = 347/644 (53%), Gaps = 53/644 (8%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+   +        L +Y  M++ G   D++T P +LKAC ++     G  +H    
Sbjct: 94  WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 153

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR---DVVSWSTMIRGYHRGGLPEE 155
            +G + + +V N L+ MY  CG+  +AR +FDEM  R   D+VSW++++  Y +GG    
Sbjct: 154 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 213

Query: 156 ALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           A+++   M   + IRP  V++++++   A V     GK +H   +R+   E   V +  A
Sbjct: 214 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFED--VFVGNA 271

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE----- 269
           ++DMY+KCG +  A ++F R+    VVSW  M++GY +    ++ + LF ++ EE     
Sbjct: 272 VVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELN 331

Query: 270 ---------------------NVF---------PSEITILSLIIECGFVGGLQLGKWLHA 299
                                +VF         P+ +T++SL+  C   G L  GK  H 
Sbjct: 332 VVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHC 391

Query: 300 YILR-------NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD--VMIWNAVISA 350
           + ++       N     L + NAL+DMY KC+  ++AR +FD +  KD  V+ W  +I  
Sbjct: 392 HAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGG 451

Query: 351 YAQAHCIDKAFELFIHMKVSK--VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
            AQ    ++A ELF  M      V PN  T+   L  C   GAL  G+ +H Y+ +   E
Sbjct: 452 NAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFE 511

Query: 409 VDVI-LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
             ++ +   L+DMY+K GDV+ A  +F     R+   W ++M GYGMHG GEEAL  F +
Sbjct: 512 SAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYE 571

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           M++ G+ P+G+TF+ +L ACSH+G+V +G + F+ M    G+VP  EHY CMVDLL RAG
Sbjct: 572 MQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAG 631

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSN 587
            LDEA E+I+ MP++P   VW ALL+A +++ N  +GE AA Q+LE+E  N G   L+SN
Sbjct: 632 RLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSN 691

Query: 588 IYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           IYA A  W DVA +R +MK   +KK PG S V+       F  G
Sbjct: 692 IYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAG 735



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/448 (29%), Positives = 234/448 (52%), Gaps = 47/448 (10%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKN-GSEVDNFTIPTILKACAQVLMTHLGK 91
           +  L  +NS+V +Y++      A+ ++  M ++ G   D  ++  +L ACA V     GK
Sbjct: 192 VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGK 251

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTM-------- 143
           ++HG+A+++GL  D +V NA++ MY++CG +  A  +F+ M  +DVVSW+ M        
Sbjct: 252 QVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIG 311

Query: 144 ---------------------------IRGYHRGGLPEEALEVMREMRFMDIRPSEVAMI 176
                                      I GY + GL  EAL+V R+MR     P+ V ++
Sbjct: 312 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLV 371

Query: 177 SMVSLFADVADVDLGKAIHACVVR-----NCKDEKLGVAIATALIDMYSKCGNLAYAKQL 231
           S++S  A    +  GK  H   ++     +  D    + +  ALIDMYSKC +   A+ +
Sbjct: 372 SLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 431

Query: 232 FNRL--NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN--VFPSEITILSLIIECGF 287
           F+ +     SVV+WTV+I G  +  E NE + LF++M++ +  V P+  TI   ++ C  
Sbjct: 432 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 491

Query: 288 VGGLQLGKWLHAYILRNGFEFS-LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
           +G L+ G+ +HAY+LRN FE + L +AN L+DMY K  ++ +AR +FD M  ++ + W +
Sbjct: 492 LGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTS 551

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQ 405
           +++ Y      ++A ++F  M+   + P+ VT V +L  C+ +G ++ G  + +   +  
Sbjct: 552 LMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDF 611

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRL 433
           G+         +VD+ ++ G ++ A  L
Sbjct: 612 GVVPGAEHYACMVDLLSRAGRLDEAMEL 639



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 195/431 (45%), Gaps = 60/431 (13%)

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNS--VVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           T +I MY    + A A  +  RL+ +S  V  W  +I   +    + + ++L+  M    
Sbjct: 62  THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLG 121

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
             P   T   ++  CG +   + G  +HA +  +GFE+++ + N LV MYG+C    +AR
Sbjct: 122 WRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 181

Query: 331 TLFDGMKSK---DVMIWNAVISAYAQAHCIDKAFELFIHMKVS-KVRPNEVTMVGLLSLC 386
            +FD M+ +   D++ WN++++AY Q     +A ++F  M     +RP+ V++V +L  C
Sbjct: 182 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 241

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
              GA   GK +H Y  + GL  DV +  A+VDMYAKCG +  A ++F     +D+  WN
Sbjct: 242 ASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWN 301

Query: 447 AM-----------------------------------MAGYGMHGCGEEALIFFVDMERS 471
           AM                                   +AGY   G G EAL  F  M   
Sbjct: 302 AMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLC 361

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD- 530
           G +PN +T + LL+ C+ AG +  GK   +   H +  +  ++      DL+    L+D 
Sbjct: 362 GSEPNVVTLVSLLSGCALAGTLLHGK---ETHCHAIKWILNLDENDPGDDLMVINALIDM 418

Query: 531 --------EAHEMIKSMPLRPNMIV-WGALLAASKLHKNPSMGEIAATQILEIEPQNYGY 581
                    A  M   +P +   +V W  L+  +  H   +      +Q+L  +P N+  
Sbjct: 419 YSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQML--QPDNF-- 474

Query: 582 NVLMSNIYAVA 592
             +M N + ++
Sbjct: 475 --VMPNAFTIS 483



 Score = 39.7 bits (91), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 58/204 (28%)

Query: 14  RQCHAHIIKTHFKFSYTNIINPL-------------------------TRYNSLVTSYIK 48
           RQ HA++++  F+ +   + N L                           + SL+T Y  
Sbjct: 499 RQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGM 558

Query: 49  NNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYV 108
           + +   AL I+  M+K G   D  T   +L AC     +H G    G    NG++ D   
Sbjct: 559 HGRGEEALQIFYEMQKVGLVPDGVTFVVVLYAC-----SHSGMVDQGINYFNGMNKD--- 610

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI 168
                               F  +P  +   ++ M+    R G  +EA+E++R    M +
Sbjct: 611 --------------------FGVVPGAE--HYACMVDLLSRAGRLDEAMELIRG---MPM 645

Query: 169 RPSEVAMISMVSLFADVADVDLGK 192
           +P+    ++++S     A+V+LG+
Sbjct: 646 KPTPAVWVALLSACRVYANVELGE 669


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 213/585 (36%), Positives = 336/585 (57%), Gaps = 16/585 (2%)

Query: 53  SSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNA 111
           +S+++ Y  + KN +   DNFT    + A       +LG  +H  A+ +G D + +V++A
Sbjct: 87  ASSISFYTHLLKNTTLSPDNFTYAFAISASPD---DNLGMCLHAHAVVDGFDSNLFVASA 143

Query: 112 LIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPS 171
           L+ +Y +   +  AR +FD+MP+RD V W+TMI G  R    +++++V ++M    +R  
Sbjct: 144 LVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLD 203

Query: 172 EVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAY 227
              + +++   A++ +V +G  I       C   KLG      + T LI ++SKC ++  
Sbjct: 204 STTVATVLPAVAEMQEVKVGMGIQ------CLALKLGFHFDDYVLTGLISVFSKCEDVDT 257

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCN-EINEGVRLFAEMIEENVFPSEITILSLIIECG 286
           A+ LF  + +  +VS+  +ISG+  CN E    V+ F E++      S  T++ LI    
Sbjct: 258 ARLLFGMIRKPDLVSYNALISGF-SCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSS 316

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
             G L L   +  + +++G     +++ AL  +Y +  EI  AR LFD    K V  WNA
Sbjct: 317 PFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNA 376

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           +IS YAQ+   + A  LF  M  ++  PN VT+  +LS C + GAL  GK +H  I+ + 
Sbjct: 377 MISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKN 436

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
           LE ++ + TAL+DMYAKCG+++ A +LF     ++   WN M+ GYG+HG G+EAL  F 
Sbjct: 437 LEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFN 496

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRA 526
           +M   G +P+ +TF+ +L ACSHAGLV EG  +F  MV+   + P  EHY CMVD+LGRA
Sbjct: 497 EMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRA 556

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMS 586
           G L++A E I+ MP+ P   VWG LL A  +HK+ ++  +A+ ++ E++P N GY VL+S
Sbjct: 557 GQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFELDPGNVGYYVLLS 616

Query: 587 NIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           NIY+V   +   A VR  +K+  + K PG + +EVNG  H F+ G
Sbjct: 617 NIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHVFVCG 661



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 127/488 (26%), Positives = 236/488 (48%), Gaps = 11/488 (2%)

Query: 71  NFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFD 130
           N  +  I KAC      HL  E H   I+NG   D      L Q   + G+   AR LF 
Sbjct: 9   NTLLALISKACT---FPHLA-ETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFF 64

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
            +P  D+  ++ +I+G+               ++   + P        +S      D +L
Sbjct: 65  SVPKPDIFLFNVLIKGFSFSPDASSISFYTHLLKNTTLSPDNFTYAFAISA---SPDDNL 121

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           G  +HA  V +  D  L V  A+AL+D+Y K   +AYA+++F+++     V W  MI+G 
Sbjct: 122 GMCLHAHAVVDGFDSNLFV--ASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGL 179

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
           +R    ++ V++F +M+ + V     T+ +++     +  +++G  +    L+ GF F  
Sbjct: 180 VRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDD 239

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
            +   L+ ++ KC ++ +AR LF  ++  D++ +NA+IS ++     + A + F  + VS
Sbjct: 240 YVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVS 299

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
             R +  TMVGL+ + +  G L +   +  +  K G  +   + TAL  +Y++  +++ A
Sbjct: 300 GQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLA 359

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
            +LF E+  + +  WNAM++GY   G  E A+  F +M  +   PN +T   +L+AC+  
Sbjct: 360 RQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQL 419

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           G ++ GKSV  +++    L   I     ++D+  + G + EA ++   +    N + W  
Sbjct: 420 GALSFGKSV-HQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLF-DLTSEKNTVTWNT 477

Query: 551 LLAASKLH 558
           ++    LH
Sbjct: 478 MIFGYGLH 485



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 205/419 (48%), Gaps = 4/419 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++T  ++N     ++ ++  M   G  +D+ T+ T+L A A++    +G  I   A+
Sbjct: 172 WNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLAL 231

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   D YV   LI ++S+C  + +AR LF  +   D+VS++ +I G+   G  E A++
Sbjct: 232 KLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVK 291

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             RE+     R S   M+ ++ + +    + L   I    V++     L  +++TAL  +
Sbjct: 292 YFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKS--GTILQPSVSTALTTI 349

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YS+   +  A+QLF+  ++ +V +W  MISGY +       + LF EM+     P+ +TI
Sbjct: 350 YSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTI 409

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +G L  GK +H  I     E ++ ++ AL+DMY KC  I  A  LFD    
Sbjct: 410 TSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSE 469

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KW 397
           K+ + WN +I  Y      D+A +LF  M     +P+ VT + +L  C+ AG +  G + 
Sbjct: 470 KNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEI 529

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
            H  + K  +E        +VD+  + G +  A     +  +     +W  ++    +H
Sbjct: 530 FHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIH 588



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 162/317 (51%), Gaps = 4/317 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  YN+L++ +  N +   A+  +  +  +G  V + T+  ++   +     HL   I G
Sbjct: 270 LVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFGHLHLACCIQG 329

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F +K+G      VS AL  +YS    +  AR LFDE   + V +W+ MI GY + GL E 
Sbjct: 330 FCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGLTEM 389

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+ + +EM   +  P+ V + S++S  A +  +  GK++H  +    K+ +  + ++TAL
Sbjct: 390 AISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLI--KSKNLEQNIYVSTAL 447

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           IDMY+KCGN++ A QLF+  ++ + V+W  MI GY      +E ++LF EM+     PS 
Sbjct: 448 IDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGFQPSS 507

Query: 276 ITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           +T LS++  C   G ++ G +  HA + +   E        +VD+ G+  ++  A     
Sbjct: 508 VTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAGQLEKALEFIR 567

Query: 335 GMKSKD-VMIWNAVISA 350
            M  +    +W  ++ A
Sbjct: 568 KMPVEPGPAVWGTLLGA 584


>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
           [Vitis vinifera]
 gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
          Length = 618

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/571 (37%), Positives = 340/571 (59%), Gaps = 22/571 (3%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           ++LK C     T   ++IH   I N +    +  N L+  + +     +A  LF ++P  
Sbjct: 36  SLLKQCTS---TKSLQQIHTQMIINAI----HKPNFLLHRFIDLKDFNNASLLFSQIPYP 88

Query: 136 DVVSWSTMIRG----YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           +  +++ MIRG    + +  L    +E   +M+   IRP+      +    A++  ++ G
Sbjct: 89  NEYAFNIMIRGLTTTWQKFNL---TIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHG 145

Query: 192 KAIHACVVRN--CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
           +  H+ V+++  C D      +  +LI MYS+CG L  A+++F+ +++  +VSW  MISG
Sbjct: 146 QCAHSGVLKSGLCADGH----VRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISG 201

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
           Y R     + V LF EM +    P E+T++S++  CG +G L LG W+  +++ N  + +
Sbjct: 202 YSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLN 261

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
             + +AL+ MYGKC ++ SAR +FD M  KDV+ WNA+I+ YAQ    D+A  LF  M+ 
Sbjct: 262 SFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRE 321

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
           S V P+++T+VG+LS C   GAL+ GKWL TY  ++GL+ D+ + TAL+DMYAKCG ++ 
Sbjct: 322 SGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDD 381

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG--VKPNGITFIGLLNAC 487
           A R+F +   ++   WNAM++    HG  +E+L  F  M + G  V+PN I+FIG+L+AC
Sbjct: 382 ALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSAC 441

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
            HAGLV EG+ +FD M    GLVPKIEH+ CMVDLL RAG + EA + I+ MP +P+ +V
Sbjct: 442 VHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVV 501

Query: 548 WGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
            GALL A +  +N  + E     +LE+EP N G  ++ S I+A   RW+D A +R +M++
Sbjct: 502 LGALLGACQKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQ 561

Query: 608 IRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
             V K PG S +E+   VH+F  G ++++ S
Sbjct: 562 RGVTKTPGCSWIEIENQVHEFHAGDVLHFIS 592



 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/393 (35%), Positives = 222/393 (56%), Gaps = 8/393 (2%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           L T++ K N     +  Y  M+  G   +NFT P +  ACA +L+ + G+  H   +K+G
Sbjct: 100 LTTTWQKFNL---TIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSG 156

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
           L  D +V ++LI MYS CG L  AR +FDE+  +D+VSW++MI GY R G   +A+ +  
Sbjct: 157 LCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFG 216

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
           EMR     P E+ ++S++    D+ D+ LG  I   VV N  D  L   + +ALI MY K
Sbjct: 217 EMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMD--LNSFVGSALIGMYGK 274

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
           CG+L+ A+++F+R+ +  VV+W  MI+GY +    +E + LF+ M E  V P +IT++ +
Sbjct: 275 CGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGV 334

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +  C  +G L  GKWL  Y    G +  + ++ AL+DMY KC  +  A  +F+ M  K+ 
Sbjct: 335 LSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNE 394

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVS--KVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           + WNA+ISA A      ++  LF  M      VRPN+++ +G+LS C  AG ++ G+ L 
Sbjct: 395 VSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDEGRQLF 454

Query: 400 TYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAY 431
             +    GL   +   + +VD+ A+ G V+ A+
Sbjct: 455 DLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAW 487



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 179/337 (53%), Gaps = 9/337 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NS+++ Y +      A+ ++  MR  G E D  T+ +IL AC  +    LG  I G
Sbjct: 192 LVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEG 251

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F ++N +D +++V +ALI MY +CG L SAR +FD M  +DVV+W+ MI GY + G+ +E
Sbjct: 252 FVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDE 311

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV-RNCKDEKLGVAIATA 214
           A+ +   MR   + P ++ ++ ++S  A +  +D GK +      R  +++   + ++TA
Sbjct: 312 AIILFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQND---IYVSTA 368

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN--VF 272
           LIDMY+KCG+L  A ++F  + Q + VSW  MIS         E + LF  M +E   V 
Sbjct: 369 LIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVR 428

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSART 331
           P++I+ + ++  C   G +  G+ L   +  + G    +   + +VD+  +   +  A  
Sbjct: 429 PNDISFIGVLSACVHAGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWD 488

Query: 332 LFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHM 367
             + M  K D ++  A++ A  +   +D + E  +HM
Sbjct: 489 FIEKMPEKPDEVVLGALLGACQKRRNVDVS-ERVMHM 524


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 205/597 (34%), Positives = 338/597 (56%), Gaps = 2/597 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + +LV  Y        A  ++  +++ G EV++F + TILK    +    L   IH 
Sbjct: 115 MVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPGLTCCIHA 174

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A K G D +A+V ++LI  YS CG++  AR +FD +  +D V+W+ M+  Y    +PE+
Sbjct: 175 CACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDIPED 234

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL    +MR    +P+   + S++     ++   LGK IH C V+   D +  V    AL
Sbjct: 235 ALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVG--GAL 292

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+KCG +  A+ +F  +  + V+ W+ +IS Y +  +  +   +F  M+  +V P+E
Sbjct: 293 LDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNE 352

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            ++  ++  C  V  L LG+ +H  +++ G+E  L + NAL+D+Y KCR + ++  +F  
Sbjct: 353 FSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRS 412

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++  + + WN +I  Y Q+   + A  +F  M+ + V   +VT   +L  C    +++  
Sbjct: 413 LRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHT 472

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H+ IEK     D I+  +L+D YAKCG +  A ++F   I  D+  WNA+++GY +H
Sbjct: 473 VQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALH 532

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G   +AL  F  M +S  KPN +TF+ LL+ C   GLV +G S+F+ M     + P ++H
Sbjct: 533 GRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMDH 592

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y C+V LLGRAG L++A + I  +P  P+ +VW ALL++  +HKN ++G+ +A ++LEIE
Sbjct: 593 YTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEIE 652

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
           PQ+    VL+SN+YA A   + VA +R+ M+ I VKKE G S VE+ G VH F  G 
Sbjct: 653 PQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKGEVHAFSVGS 709



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/494 (26%), Positives = 255/494 (51%), Gaps = 8/494 (1%)

Query: 68  EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG--LDGDAYVSNALIQMYSECGSLVSA 125
           ++D++    +L+ C        G+ +H   ++ G     D + +N L+ +Y++ G L +A
Sbjct: 44  KLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAA 103

Query: 126 RYLFDEMPNRDVVSWSTMIRGYH-RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           R LFD MP R++VS+ T+++GY  RGG  EEA  + R ++      +   + +++ +   
Sbjct: 104 RRLFDGMPERNMVSFVTLVQGYALRGGF-EEAAGLFRRLQREGHEVNHFVLTTILKVLVA 162

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
           +    L   IHAC  +   D      + ++LID YS CG +++A+ +F+ +     V+WT
Sbjct: 163 MDAPGLTCCIHACACKLGHDRN--AFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWT 220

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
            M+S Y   +   + +  F++M      P+   + S++     +    LGK +H   ++ 
Sbjct: 221 AMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKT 280

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
             +    +  AL+DMY KC  I  ART+F+ +   DV++W+ +IS YAQ++  ++AFE+F
Sbjct: 281 LCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMF 340

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC 424
           + M  S V PNE ++ G+L  C     L++G+ +H  + K G E ++ +  AL+D+YAKC
Sbjct: 341 LRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKC 400

Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
            ++  +  +F      +   WN ++ GY   G  E+AL  F +M  + V    +TF  +L
Sbjct: 401 RNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVL 460

Query: 485 NACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
            AC++   +     +   ++              ++D   + G + +A ++ +S+ ++ +
Sbjct: 461 RACANTASIKHTVQIH-SLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESI-IQCD 518

Query: 545 MIVWGALLAASKLH 558
           ++ W A+++   LH
Sbjct: 519 VVSWNAIISGYALH 532


>gi|357446017|ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482334|gb|AES63537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 622

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 195/553 (35%), Positives = 337/553 (60%), Gaps = 4/553 (0%)

Query: 72  FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE 131
           F +P+++KAC+       G ++H  A   G   D  VSN++I MY++   + SAR +FD 
Sbjct: 67  FVLPSVIKACSFTHFHAFGTQLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDT 126

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV--D 189
           MP+RD ++W++MI  Y + GL  EAL+++++  F+   P    + SMVS+     D+   
Sbjct: 127 MPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGWR 186

Query: 190 LGKAIHACVVRNCKDE-KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
           +G+ IH  VV + +   +  V ++TA +D Y +CG+   A+ +F+ +   + VSWT +IS
Sbjct: 187 IGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVIS 246

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
           G     + +  +  + EM  E V P+ +T+++L+  C   G ++ GK +H Y  R GF+ 
Sbjct: 247 GCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDS 306

Query: 309 SLAMANALVDMYGKC-REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             + + AL+ +Y +C + +  A  +F+G   +DV++W+++I +YA+    DKA +LF  M
Sbjct: 307 CHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKM 366

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           +  +  PN VT++ ++S CT   + + G  +H YI K G+   + +  AL++MYAKCG +
Sbjct: 367 RTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSL 426

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
           + + ++F E   RD   WN+M++ YG+HG GE+AL  F +M+  GVK + +TF+ +L+AC
Sbjct: 427 DDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSAC 486

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           +HAGLVTEG+ +F+++     +   IEHY C++DL GR+G L++A E++++MP++P+  +
Sbjct: 487 NHAGLVTEGQQLFEQVNADCEIPITIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARI 546

Query: 548 WGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
           W +L+++ KLH    + E  ++Q++  EP N     L+S I+A   RW D+  VR  MK 
Sbjct: 547 WSSLVSSCKLHGRLDIAESLSSQLIRSEPNNAASYTLLSMIHAEKGRWLDIEQVRETMKL 606

Query: 608 IRVKKEPGFSSVE 620
            R++K  GFS +E
Sbjct: 607 QRLRKCYGFSRIE 619



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 178/367 (48%), Gaps = 19/367 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + ++++    N     AL  Y  M+  G   +  T+  +L ACA+      GKEIHG+A 
Sbjct: 241 WTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAF 300

Query: 99  KNGLDGDAYVSNALIQMYSECG-SLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           + G D     S ALI +Y ECG SL  A  +F+    RDVV WS++I  Y R G  ++AL
Sbjct: 301 RRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKAL 360

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IAT 213
           ++  +MR  +  P+ V +++++S   +++    G  IH  ++      K G+     +  
Sbjct: 361 KLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYIL------KFGIGFSIFVCN 414

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALI+MY+KCG+L  ++++F  +     V+W  MIS Y       + ++ F EM E  V  
Sbjct: 415 ALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKL 474

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTL 332
             +T L+++  C   G +  G+ L   +  +     ++     L+D++G+  ++  A  +
Sbjct: 475 DAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIPITIEHYACLIDLHGRSGKLEDALEI 534

Query: 333 FDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
              M  K    IW++++S+      +D A  L    ++ +  PN      LLS+      
Sbjct: 535 LRTMPMKPSARIWSSLVSSCKLHGRLDIAESL--SSQLIRSEPNNAASYTLLSMIHA--- 589

Query: 392 LEMGKWL 398
            E G+WL
Sbjct: 590 -EKGRWL 595



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 82/204 (40%), Gaps = 13/204 (6%)

Query: 359 KAFELFIHMKVSKVRPNEVTMV--GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
           +  + F  +  S    N +  V   ++  C+       G  LH      G   D I+  +
Sbjct: 47  QTLQFFTQLHFSAHHFNSIPFVLPSVIKACSFTHFHAFGTQLHCLAFITGSYTDPIVSNS 106

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           ++ MYAK  D+  A ++F    +RD   WN+M+  Y  +G   EAL    D    G  P 
Sbjct: 107 IISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPK 166

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP---KIEH----YGCMVDLLGRAGLL 529
                 +++ C   G   +      + +HGL +V    +I+H        VD   R G  
Sbjct: 167 PELLASMVSMC---GREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDS 223

Query: 530 DEAHEMIKSMPLRPNMIVWGALLA 553
             A  +   M ++ N + W A+++
Sbjct: 224 LMARSVFDEMEVK-NEVSWTAVIS 246


>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  399 bits (1024), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 206/573 (35%), Positives = 329/573 (57%), Gaps = 34/573 (5%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQ---MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           IH   IK GL    Y  + LI+   +      L  A  +F+ +   +++ W+TM RG+  
Sbjct: 9   IHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 68

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
              P  AL++   M  + + P+      ++   A       G+ IH  V++   D  L V
Sbjct: 69  SSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 128

Query: 210 AIA-----------------------------TALIDMYSKCGNLAYAKQLFNRLNQNSV 240
             +                             TALI  Y+  G +  A+++F+ +    V
Sbjct: 129 HTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDEIPVKDV 188

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           VSW  MISGY       E + LF +M++ NV P E T+++++  C   G ++LG+ +H++
Sbjct: 189 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHSW 248

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           I  +GF  +L + NAL+D+Y KC E+ +A  LF+G+  KDV+ WN +I  Y   +   +A
Sbjct: 249 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYTHMNLYKEA 308

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK--QGLEVDVILKTALV 418
             LF  M  S   PN+VTM+ +L  C   GA+++G+W+H YI+K  +G+     L+T+L+
Sbjct: 309 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLI 368

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           DMYAKCGD+  A+++F+  +++ +  WNAM+ G+ MHG  + +   F  M ++G++P+ I
Sbjct: 369 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDI 428

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           TF+GLL+ACSH+G++  G+ +F  M     + PK+EHYGCM+DLLG +GL  EA EMI +
Sbjct: 429 TFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINT 488

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDV 598
           M + P+ ++W +LL A K+H N  +GE  A  +++IEP+N G  VL+SNIYA A RWN+V
Sbjct: 489 MEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGRWNEV 548

Query: 599 AGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           A  R ++ +  +KK PG SS+E++ +VH+FI G
Sbjct: 549 ANTRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 581



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 159/512 (31%), Positives = 257/512 (50%), Gaps = 73/512 (14%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  I  P L  +N++   +  ++ P SAL +Y  M   G   +++T P +LK+CA+    
Sbjct: 48  FETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAF 107

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR------------ 135
             G++IHG  +K G D D YV  +LI MY + G L  A  +FDE P+R            
Sbjct: 108 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGY 167

Query: 136 -------------------DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMI 176
                              DVVSW+ MI GY   G  +EALE+ ++M   ++RP E  M+
Sbjct: 168 ASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 227

Query: 177 SMVSLFADVADVDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNR 234
           ++VS  A    ++LG+ +H+ +     D   G  + I  ALID+YSKCG L  A  LF  
Sbjct: 228 TVVSACAQSGSIELGRQVHSWI----DDHGFGSNLKIVNALIDLYSKCGELETACGLFEG 283

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           L    V+SW  +I GY   N   E + LF EM+     P+++T+LS++  C  +G + +G
Sbjct: 284 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 343

Query: 295 KWLHAYILR--NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
           +W+H YI +   G   + ++  +L+DMY KC +I +A  +F+ +  K +  WNA+I  +A
Sbjct: 344 RWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFA 403

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
                D +F++F  M+ + + P+++T VGLLS C+ +G L++G+  H +   + +  D  
Sbjct: 404 MHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGR--HIF---RSMTQDYK 458

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           + T  ++ Y    D+ G   LF EA                      E +I  ++ME   
Sbjct: 459 M-TPKLEHYGCMIDLLGHSGLFKEA----------------------EEMINTMEME--- 492

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
             P+G+ +  LL AC   G V  G+S    ++
Sbjct: 493 --PDGVIWCSLLKACKMHGNVELGESFAQNLI 522



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 146/299 (48%), Gaps = 38/299 (12%)

Query: 291 LQLGKWLHAYILRNGFEFSLAMANALVD---MYGKCREIRSARTLFDGMKSKDVMIWNAV 347
           LQ  + +HA +++ G   +    + L++   +      +  A ++F+ ++  +++IWN +
Sbjct: 3   LQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWNTM 62

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
              +A +     A +L++ M    + PN  T   LL  C ++ A + G+ +H ++ K G 
Sbjct: 63  FRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGC 122

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM----------------------- 444
           ++D+ + T+L+ MY + G +  A+++F E+ +RD+                         
Sbjct: 123 DLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMFDE 182

Query: 445 --------WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
                   WNAM++GY   G  +EAL  F DM ++ V+P+  T + +++AC+ +G +  G
Sbjct: 183 IPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELG 242

Query: 497 KSVFDKM-VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           + V   +  HG G   KI     ++DL  + G L+ A  + + +P + ++I W  L+  
Sbjct: 243 RQVHSWIDDHGFGSNLKI--VNALIDLYSKCGELETACGLFEGLPYK-DVISWNTLIGG 298


>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/649 (34%), Positives = 338/649 (52%), Gaps = 81/649 (12%)

Query: 23  THFKF---SYTNIINPLTR------YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT 73
           THF F    YT  I           +N ++ +YI+ N P  A  +Y  M  N    DN+T
Sbjct: 21  THFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYT 80

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
            P +++AC+        K++H   +K G D D YV N LI  +S C ++  A  +F+E  
Sbjct: 81  YPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESS 140

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
             D VSW++++ GY   G  EEA  +  +M       S +A  SM+ LF           
Sbjct: 141 VLDSVSWNSILAGYIEIGNVEEAKHIYHQMP----ERSIIASNSMIVLFG---------- 186

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           +   VV  CK                           LF+ + +  +V+W+ +I+ + + 
Sbjct: 187 MRGLVVEACK---------------------------LFDEMLEKDMVTWSALIACFQQN 219

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
               E +R F  M +  V   E+  +S +  C  +  + +GK +H+  L+ G E  + + 
Sbjct: 220 EMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQ 279

Query: 314 NALVDMYGKCREIRSARTLFD-------------------------------GMKSKDVM 342
           NAL+ MY KC +I  AR LFD                                M  KDV+
Sbjct: 280 NALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVV 339

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
            W+++IS YAQ    D+   LF  M++S  +P+E T+V ++S C    ALE GKW+H YI
Sbjct: 340 SWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYI 399

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
           ++ GL ++VIL T L+DMY KCG V  A  +F   I + I  WNA++ G  M+G  E +L
Sbjct: 400 KRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSL 459

Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDL 522
             F +M++  V PN ITF+G+L AC H GLV EG+  F  M+H   + P ++HYGCMVDL
Sbjct: 460 DMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDL 519

Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYN 582
           LGRAG L EA E++  MP+ P++  WGALL A K H +  MG     +++E++P + G++
Sbjct: 520 LGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFH 579

Query: 583 VLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           VL+SNIYA   +W+DV  +R +M + RV K PG S +E NG++H+F+ G
Sbjct: 580 VLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAG 628


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  398 bits (1023), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 217/662 (32%), Positives = 350/662 (52%), Gaps = 40/662 (6%)

Query: 4   KNGFLNLEQTRQCHAHIIKTHFKF---SYTNIINPLTR---------------------- 38
           KN FL+L +     +H+ +TH +     + N I+ LT+                      
Sbjct: 20  KNNFLDLFKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQ 79

Query: 39  ------YNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGK 91
                 +N L+  +  N  P S+L ++A +RK+   + ++ T    + A +       G 
Sbjct: 80  RPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGC 139

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            IHG AI +G D +  + + +++MY +   +  AR +FD MP +D + W+TMI GY +  
Sbjct: 140 VIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNE 199

Query: 152 LPEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRN-CKDEKLGV 209
           +  E+++V R++      R     ++ ++   A++ ++ LG  IH+   +  C       
Sbjct: 200 MYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY-- 257

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            + T  I +YSKCG +  A  LF    +  +V++  MI GY    E    + LF E++  
Sbjct: 258 -VLTGFISLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
                  T++SL+      G L L   +H Y L++ F    +++ AL  +Y K  EI SA
Sbjct: 317 GAKLKSSTLVSLV---PVSGHLMLIYAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESA 373

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           R LFD    K +  WNA+IS Y Q    + A  LF  M+ S+  PN VT+  +LS C + 
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQL 433

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           GAL +GKW+H  +     E  + + TAL+ MYAKCG +  A RLF     ++   WN M+
Sbjct: 434 GALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMI 493

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           +GYG+HG G+EAL  F +M  SG+ P  +TF+ +L ACSHAGLV EG  +F+ M+H  G 
Sbjct: 494 SGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGF 553

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            P ++HY C+VD+LGRAG L  A + I++MP++P   VW  LL A ++HK+ ++    + 
Sbjct: 554 EPSVKHYACVVDILGRAGHLQRALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSE 613

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           ++ E++P N GY+VL+SNI++    +   A VR+  K+ ++ K PG++ +E+    H F 
Sbjct: 614 KLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFT 673

Query: 630 RG 631
            G
Sbjct: 674 SG 675


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/608 (35%), Positives = 351/608 (57%), Gaps = 6/608 (0%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMR--KNGSEVDNFTIPTILKACAQV 84
           F Y  + N L  +NS+++ + +N       ++   M   + G   D  T+ T+L  CA+ 
Sbjct: 89  FHYMPVRN-LVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCARE 147

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
           +   +G  IHG A+K GL  D  V+N+L+ MYS+CG L  A+ LFD+   ++ VSW+TMI
Sbjct: 148 VDVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMI 207

Query: 145 RGYHRGGLPEEALEVMREMRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
            G    G   EA  + REM+   DI  +EV +++++    +++ +   K +H   +R+  
Sbjct: 208 GGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRH-- 265

Query: 204 DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
             +    +A   +  Y+KCG L  A+++F  +   +V SW  +I G  +  +  + + L+
Sbjct: 266 GFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLY 325

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
            +M    + P   TI SL++    +  L+ GK +H ++LR+G E    +  +L+ +Y  C
Sbjct: 326 IQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHC 385

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
            E  SAR LFDGM+ K  + WNA+IS Y+Q    + A  LF  +     +P+++ +V +L
Sbjct: 386 GESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVL 445

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
             C++  AL +GK  H Y  K  L  DV +  + +DMYAK G +  +  +F     +D+ 
Sbjct: 446 GACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLA 505

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            WNA++A YG+HG GEE++  F  M + G  P+G TFIG+L  CSHAGLV EG   F++M
Sbjct: 506 SWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEM 565

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
            +  G+ PK+EHY C++D+LGRAG LD+A  ++  MP +P+  VW +LL+  +      +
Sbjct: 566 QNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEI 625

Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
           G+I A ++LE+EP+N    V +SN+YA + RW+DV  VR+++K+I ++K+ G S +E+ G
Sbjct: 626 GQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIELGG 685

Query: 624 LVHKFIRG 631
            VH F+ G
Sbjct: 686 KVHSFVAG 693



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 164/517 (31%), Positives = 273/517 (52%), Gaps = 8/517 (1%)

Query: 48  KNNKPSSALNIYA-FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDA 106
           +N   S A++++   +       DNFT P ++KAC   L   LG+ IHG  IK GL  D 
Sbjct: 7   RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66

Query: 107 YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM 166
           +V NALI MY + G + +A  +F  MP R++VSW+++I G+   G  ++  +++ EM   
Sbjct: 67  FVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAG 126

Query: 167 D--IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
           +  + P    +++++ + A   DV +G  IH   V+    E   V +  +L+DMYSKCG 
Sbjct: 127 EEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSED--VRVNNSLVDMYSKCGY 184

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM-IEENVFPSEITILSLII 283
           L  A+ LF++ N+ + VSW  MI G      I E   LF EM ++E++  +E+T+L+++ 
Sbjct: 185 LTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILP 244

Query: 284 ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
            C  +  L+  K LH Y +R+GF++   +AN  V  Y KC  +  A  +F  M++K V  
Sbjct: 245 ACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNS 304

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           WNA+I   AQ     KA  L+I M  S + P+  T+  LL       +L  GK +H ++ 
Sbjct: 305 WNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVL 364

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
           + GLE+D  +  +L+ +Y  CG+ + A  LF     +    WNAM++GY  +G  E+ALI
Sbjct: 365 RHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALI 424

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL 523
            F  +   G +P+ I  + +L ACS    +  GK      +  L L+  +      +D+ 
Sbjct: 425 LFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKAL-LMEDVFVACSTIDMY 483

Query: 524 GRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
            ++G + E+  +   +    ++  W A++AA  +H +
Sbjct: 484 AKSGCIKESRSVFDGLK-NKDLASWNAIIAAYGVHGD 519


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 220/658 (33%), Positives = 343/658 (52%), Gaps = 62/658 (9%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           +P   +N L+  +IK  +  SA+N+   M + G+  D+FT+P +LKAC ++     G   
Sbjct: 118 SPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAF 177

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR---DVVSWSTMIRGYHRG 150
           HG    NG + + ++ NAL+ MYS CGSL  A  +FDE+  R   DV+SW++++  + + 
Sbjct: 178 HGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKS 237

Query: 151 GLPEEALEVMREMRFM------DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
                AL++  +M  +      + R   +++++++     +  V   K +H   +RN   
Sbjct: 238 SNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTF 297

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
               V +  ALID Y+KCG +  A ++FN +    VVSW  M++GY +         LF 
Sbjct: 298 PD--VFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFK 355

Query: 265 EMIEENV-----------------------------------FPSEITILSLIIECGFVG 289
            M +EN+                                    P+ +TI+S++  C  +G
Sbjct: 356 NMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLG 415

Query: 290 GLQLGKWLHAYILRN----------GFEFSLAMANALVDMYGKCREIRSARTLFDG--MK 337
               G  +HAY L+N          G +  L + NAL+DMY KCR  ++AR++FD   ++
Sbjct: 416 AFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLE 475

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHM--KVSKVRPNEVTMVGLLSLCTEAGALEMG 395
            ++V+ W  +I  +AQ    + A +LF+ M  +   V PN  T+  +L  C    A+ +G
Sbjct: 476 ERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIG 535

Query: 396 KWLHTYIEKQGL--EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           K +H Y+ +          +   L+DMY+KCGDV+ A  +F     +    W +MM GYG
Sbjct: 536 KQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYG 595

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
           MHG G EAL  F  M ++G  P+ ITF+ +L ACSH G+V +G S FD M    GL P+ 
Sbjct: 596 MHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRA 655

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHY C +DLL R+G LD+A   +K MP+ P  +VW ALL+A ++H N  + E A  +++E
Sbjct: 656 EHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVE 715

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +  +N G   L+SNIYA A RW DVA +R +MK+  +KK PG S V+       F  G
Sbjct: 716 MNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVG 773



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 230/510 (45%), Gaps = 62/510 (12%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           +   ++  Y  CG+   A  + + +     V W+ +IR + + G  + A+ V   M    
Sbjct: 91  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 150

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
            RP    +  ++    ++     G A H  +   C   +  V I  AL+ MYS+CG+L  
Sbjct: 151 TRPDHFTLPHVLKACGELPSYRCGSAFHGLIC--CNGFESNVFICNALVAMYSRCGSLEE 208

Query: 228 AKQLFNRLNQ---NSVVSWTVMISGYIRCNEINEGVRLFAEMI------EENVFPSEITI 278
           A  +F+ + Q   + V+SW  ++S +++ +     + LF++M         N     I+I
Sbjct: 209 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISI 268

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           ++++  CG +  +   K +H   +RNG    + + NAL+D Y KC  + +A  +F+ M+ 
Sbjct: 269 VNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEF 328

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR------------------------- 373
           KDV+ WNA+++ Y+Q+   + AFELF +M+   +                          
Sbjct: 329 KDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNL 388

Query: 374 ----------PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ----------GLEVDVIL 413
                     PN VT++ +LS C   GA   G  +H Y  K           G + D+++
Sbjct: 389 FRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMV 448

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIY--RDICMWNAMMAGYGMHGCGEEALIFFVDM--E 469
             AL+DMY+KC     A  +F +     R++  W  M+ G+  +G   +AL  FV+M  E
Sbjct: 449 YNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 508

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGL 528
             GV PN  T   +L AC+H   +  GK +   ++ H            C++D+  + G 
Sbjct: 509 PYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGD 568

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +D A  +  SM  + + I W +++    +H
Sbjct: 569 VDTARHVFDSMSQK-SAISWTSMMTGYGMH 597



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 173/336 (51%), Gaps = 16/336 (4%)

Query: 31  NIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           NI   +  + +++  Y +      ALN++  M  +GS  +  TI ++L ACA +     G
Sbjct: 361 NIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 420

Query: 91  KEIHGFAIKN----------GLDGDAYVSNALIQMYSECGSLVSARYLFDEMP--NRDVV 138
            EIH +++KN          G D D  V NALI MYS+C S  +AR +FD++P   R+VV
Sbjct: 421 TEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 480

Query: 139 SWSTMIRGYHRGGLPEEALEVMREM--RFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           +W+ MI G+ + G   +AL++  EM      + P+   +  ++   A +A + +GK IHA
Sbjct: 481 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 540

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
            V+R+ + E     +A  LIDMYSKCG++  A+ +F+ ++Q S +SWT M++GY      
Sbjct: 541 YVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRG 600

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANA 315
           +E + +F +M +    P +IT L ++  C   G +  G  +  +     G          
Sbjct: 601 SEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAC 660

Query: 316 LVDMYGKCREIRSA-RTLFDGMKSKDVMIWNAVISA 350
            +D+  +   +  A RT+ D       ++W A++SA
Sbjct: 661 AIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSA 696



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 174/397 (43%), Gaps = 54/397 (13%)

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
           ++ T ++  Y  CG   YA  +  R+  +  V W ++I  +I+   ++  + +   M+  
Sbjct: 90  SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 149

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
              P   T+  ++  CG +   + G   H  I  NGFE ++ + NALV MY +C  +  A
Sbjct: 150 GTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 209

Query: 330 RTLFDGMKSK---DVMIWNAVISAYAQAHCIDKAFELF------IHMKVSKVRPNEVTMV 380
             +FD +  +   DV+ WN+++SA+ ++     A +LF      +H K +  R + +++V
Sbjct: 210 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 269

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
            +L  C    A+   K +H    + G   DV +  AL+D YAKCG +  A ++F+   ++
Sbjct: 270 NILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 329

Query: 441 DICMWNAM-----------------------------------MAGYGMHGCGEEALIFF 465
           D+  WNAM                                   +AGY   GC  EAL  F
Sbjct: 330 DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLF 389

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV---------PKIEHY 516
             M  SG  PN +T I +L+AC+  G  ++G  +    +    L            +  Y
Sbjct: 390 RQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVY 449

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRP-NMIVWGALL 552
             ++D+  +      A  +   +PL   N++ W  ++
Sbjct: 450 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMI 486


>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like, partial [Cucumis sativus]
          Length = 735

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 226/629 (35%), Positives = 351/629 (55%), Gaps = 47/629 (7%)

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVL-----MTHLGKEIHGFAIK 99
           S+I ++K    +  + F +   S      + T  K+C + L     M  L K+I     +
Sbjct: 65  SFINHSKSPVYIPSF-FFKPPFSSSSASNLQTNKKSCIECLRNCKSMDQL-KQIQSQIFR 122

Query: 100 NGLDGDAYVSNALIQMY--SECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
            GL+GD    N L+     S  G+L  A  +F+ + +  +  ++ M++ Y + G+  + L
Sbjct: 123 IGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKIYAKRGILRKVL 182

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            + +++R   + P       ++     + DV  G+ +   +V+   D  L   +  +LID
Sbjct: 183 LLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMD--LDNYVYNSLID 240

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPSEI 276
           MY +  N+  AK+LF+ +     VSW VMISGY+RC    + +  F EM +E N  P E 
Sbjct: 241 MYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEA 300

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR------------ 324
           T++S +  C  +  L+LG  +H Y+ R    F+  + NAL+DMY KC             
Sbjct: 301 TVVSTLSACTALKNLELGDEIHNYV-RKELGFTTRIDNALLDMYAKCGCLNIARNIFDEM 359

Query: 325 -------------------EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
                              ++R AR LFD    +DV++W A+I+ Y Q H  D A  LF 
Sbjct: 360 SMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFR 419

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            M++ K++P++ T+V LL+ C + GALE GKW+H Y+++  + +DV++ TAL++MY+KCG
Sbjct: 420 EMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCG 479

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
            V+ +  +F E   +D   W +++ G  M+G   EAL  F +MER G KP+ ITFIG+L+
Sbjct: 480 CVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLS 539

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
           ACSH GLV EG+  F+ M     + PK+EHYGC++DLLGRAGLLDEA E+I+ +P+    
Sbjct: 540 ACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCE 599

Query: 546 IV---WGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVR 602
           IV   +GALL+A ++H N  MGE  A ++  IE  +   + L++NIYA  +RW D   VR
Sbjct: 600 IVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVR 659

Query: 603 RVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           R MKE+ VKK PG S +EV+G+VH+F+ G
Sbjct: 660 RKMKELGVKKMPGCSLIEVDGIVHEFLVG 688



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/431 (31%), Positives = 219/431 (50%), Gaps = 36/431 (8%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN +V  Y K       L ++  +R++G   D FT P +LKA   +     G+++ GF +
Sbjct: 165 YNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIV 224

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+D D YV N+LI MY E  ++ +A+ LFDEM  RD VSW+ MI GY R    E+A+ 
Sbjct: 225 KTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAIN 284

Query: 159 VMREMRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
             REM+   + +P E  ++S +S    + +++LG  IH  V    K+      I  AL+D
Sbjct: 285 TFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVR---KELGFTTRIDNALLD 341

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE------------------- 258
           MY+KCG L  A+ +F+ ++  +V+ WT MISGYI C ++ E                   
Sbjct: 342 MYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAM 401

Query: 259 ------------GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
                        V LF EM  + + P + T+++L+  C  +G L+ GKW+H Y+  N  
Sbjct: 402 INGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRI 461

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
              + +  AL++MY KC  +  +  +F  ++ KD   W ++I   A      +A  LF  
Sbjct: 462 TMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSE 521

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK-QGLEVDVILKTALVDMYAKCG 425
           M+    +P+++T +G+LS C+  G +E G+     ++K   +E  V     ++D+  + G
Sbjct: 522 MERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAG 581

Query: 426 DVNGAYRLFSE 436
            ++ A  L  E
Sbjct: 582 LLDEAEELIQE 592



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 125/248 (50%), Gaps = 7/248 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++  Y++ +    A+ ++  M+    + D FT+ T+L  CAQ+     GK IHG+  
Sbjct: 398 WTAMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLD 457

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +N +  D  V  ALI+MYS+CG +  +  +F E+ ++D  SW+++I G    G   EAL 
Sbjct: 458 ENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALR 517

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  EM  +  +P ++  I ++S  +    V+ G+     + +  + E   V     +ID+
Sbjct: 518 LFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEP-KVEHYGCVIDL 576

Query: 219 YSKCGNLAYAKQLFNRL---NQNSVVS-WTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
             + G L  A++L   +   N   VV  +  ++S     N ++ G RL  ++  EN+   
Sbjct: 577 LGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKL--ENIESC 634

Query: 275 EITILSLI 282
           + +I +L+
Sbjct: 635 DSSIHTLL 642


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 209/516 (40%), Positives = 313/516 (60%), Gaps = 11/516 (2%)

Query: 125  ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
            A + +  +   +V SW+++I    RGG   EAL     +R + + P+  +    +   + 
Sbjct: 1095 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 1154

Query: 185  VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
            + D+  G+  H        +  L V+  +ALIDMYSKCG L  A+ LF+ +   +VVSWT
Sbjct: 1155 LCDLVSGRMSHQQAFVFGFETDLFVS--SALIDMYSKCGQLKDARALFDEIPLRNVVSWT 1212

Query: 245  VMISGYIRCNEINEGVRLFAEMIEE--------NVFPSEITILSLIIECGFVGGLQLGKW 296
             MI+GY++  + +  + LF + +EE        NV    + ++S++  C  V G  + + 
Sbjct: 1213 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 1272

Query: 297  LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
            +H ++++ GF+ S+ + N L+D Y KC +   ++ +FD M+ KD + WN++I+ YAQ+  
Sbjct: 1273 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 1332

Query: 357  IDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
              +A E+F  M +   VR N VT+  +L  C  AGAL  GK +H  + K  LE +V + T
Sbjct: 1333 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT 1392

Query: 416  ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
            +++DMY KCG V  A + F     +++  W AM+AGYGMHG  +EAL  F  M R+GVKP
Sbjct: 1393 SIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKP 1452

Query: 476  NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEM 535
            N ITF+ +L ACSHAGLV EG   F+ M H   + P IEHYGCMVDL GRAG L+EA+ +
Sbjct: 1453 NYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNL 1512

Query: 536  IKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRW 595
            IK M ++P+ +VWG+LL A ++HKN  +GEIAA ++ E++P N GY VL+SN+YA A RW
Sbjct: 1513 IKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRW 1572

Query: 596  NDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             DV  +R +MK  ++ K PGFS VE+ G VH F+ G
Sbjct: 1573 ADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVG 1608



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/384 (33%), Positives = 198/384 (51%), Gaps = 43/384 (11%)

Query: 192 KAIHACVVRN-CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           + IHA ++R+   +++L   +   LI +YS  G +AYA  LF ++      +W ++I   
Sbjct: 44  RQIHAKIIRSGLSNDQL---LTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLII--- 97

Query: 251 IRCNEIN----EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
            R N IN    + + L+  M+ + +   + T   +I  C     + LGK +H  +++ GF
Sbjct: 98  -RANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGF 156

Query: 307 EFSLAMANALVDMYGKCREIR-------------------------------SARTLFDG 335
              + + N L+D Y KC   R                                AR +FD 
Sbjct: 157 SGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDE 216

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           + SK+V+ W A+I+ Y +    ++A ELF  M+   + PNE TMV L+  CTE G L +G
Sbjct: 217 IPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG 276

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H Y  K  +E+ V L TAL+DMY+KCG +  A  +F     + +  WN+M+   G+H
Sbjct: 277 RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVH 336

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G G+EAL  F +MER  VKP+ ITFIG+L AC H   V EG + F +M    G+ P  EH
Sbjct: 337 GLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEH 396

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSM 539
           Y CM +L  R+  LDEA +  K +
Sbjct: 397 YECMTELYARSNNLDEAFKSTKEV 420



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 225/430 (52%), Gaps = 17/430 (3%)

Query: 39   YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
            +NS++    +      AL  ++ +RK G      + P  +K+C+ +     G+  H  A 
Sbjct: 1110 WNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAF 1169

Query: 99   KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
              G + D +VS+ALI MYS+CG L  AR LFDE+P R+VVSW++MI GY +    + AL 
Sbjct: 1170 VFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALL 1229

Query: 159  VMREMRFMD----------IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
            + ++  F++          +    V M+S++S  + V+   + + +H  VV+   D  +G
Sbjct: 1230 LFKD--FLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIG 1287

Query: 209  VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
            V     L+D Y+KCG    +K++F+ + +   +SW  MI+ Y +     E + +F  M+ 
Sbjct: 1288 V--GNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVR 1345

Query: 269  E-NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
               V  + +T+ ++++ C   G L+ GK +H  +++   E+++ +  +++DMY KC  + 
Sbjct: 1346 HVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVE 1405

Query: 328  SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
             A+  FD MK K+V  W A+++ Y       +A ++F  M  + V+PN +T V +L+ C+
Sbjct: 1406 MAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACS 1465

Query: 388  EAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMW 445
             AG +E G  W +    K  +E  +     +VD++ + G +N AY L     +  D  +W
Sbjct: 1466 HAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVW 1525

Query: 446  NAMMAGYGMH 455
             +++    +H
Sbjct: 1526 GSLLGACRIH 1535



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 189/390 (48%), Gaps = 33/390 (8%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +L+ C      HL ++IH   I++GL  D  ++  LI +YS  G +  A  LF ++ N  
Sbjct: 33  LLQNCKN--FKHL-RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
             +W+ +IR     GL E+AL + + M    I   +     ++    +   +DLGK +H 
Sbjct: 90  TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149

Query: 197 CVVR------------------NCKDEKLGVAIA-----------TALIDMYSKCGNLAY 227
            +++                   C   +  + +            T +I     CG+L  
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A+++F+ +   +VVSWT MI+GYIR  +  E + LF  M  EN+FP+E T++SLI  C  
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
           +G L LG+ +H Y ++N  E  + +  AL+DMY KC  I+ A  +F+ M  K +  WN++
Sbjct: 270 MGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSM 329

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-G 406
           I++        +A  LF  M+   V+P+ +T +G+L  C     ++ G    T + +  G
Sbjct: 330 ITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYG 389

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           +         + ++YA+  +++ A++   E
Sbjct: 390 IAPIPEHYECMTELYARSNNLDEAFKSTKE 419



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 162/329 (49%), Gaps = 39/329 (11%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHFKFSYT-----NIINPLT-RYNSLVTSYIKNNKPSSAL 56
           I++G  N +   +   H+  TH + +Y       I NP T  +N ++ +   N     AL
Sbjct: 51  IRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQAL 110

Query: 57  NIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMY 116
            +Y  M   G   D FT P ++KAC   L   LGK +HG  IK G  GD +V N LI  Y
Sbjct: 111 MLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFY 170

Query: 117 SECGSLVSARYLFDEMPNRDVVSWST-------------------------------MIR 145
            +CG    A  +F++M  R+VVSW+T                               MI 
Sbjct: 171 FKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMIN 230

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           GY R   PEEALE+ + M+  +I P+E  M+S++    ++  + LG+ IH   ++NC + 
Sbjct: 231 GYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIE- 289

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
            +GV + TALIDMYSKCG++  A ++F  + + S+ +W  MI+         E + LF+E
Sbjct: 290 -IGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSE 348

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLG 294
           M   NV P  IT + ++  C  +  ++ G
Sbjct: 349 MERVNVKPDAITFIGVLCACVHIKNVKEG 377



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 143/317 (45%), Gaps = 40/317 (12%)

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
           + +HA I+R+G      +   L+ +Y     I  A  LF  +++     WN +I A    
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
              ++A  L+ +M    +  ++ T   ++  CT   ++++GK +H  + K G   DV ++
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 415 TALVDMYAKCG-------------------------------DVNGAYRLFSEAIYRDIC 443
             L+D Y KCG                               D+  A R+F E   +++ 
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            W AM+ GY  +   EEAL  F  M+   + PN  T + L+ AC+  G++T G+ + D  
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD-- 281

Query: 504 VHGLGLVPKIEHY--GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
            + +    +I  Y    ++D+  + G + +A E+ ++MP R ++  W +++ +  +H   
Sbjct: 282 -YAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVH--- 336

Query: 562 SMGEIAATQILEIEPQN 578
            +G+ A     E+E  N
Sbjct: 337 GLGQEALNLFSEMERVN 353



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 91/155 (58%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++  YI+N +P  AL ++  M+      + +T+ +++KAC ++ +  LG+ IH +AI
Sbjct: 225 WTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAI 284

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KN ++   Y+  ALI MYS+CGS+  A  +F+ MP + + +W++MI      GL +EAL 
Sbjct: 285 KNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALN 344

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
           +  EM  ++++P  +  I ++     + +V  G A
Sbjct: 345 LFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCA 379


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 215/595 (36%), Positives = 333/595 (55%), Gaps = 6/595 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N LV  Y K      AL++Y  M   G + D +T P +L+ C  +     G+EIH 
Sbjct: 172 LFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHV 231

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             I+ G + D  V NALI MY +CG + +AR +FD+MPNRD +SW+ MI GY   G+  E
Sbjct: 232 HVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLE 291

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            L +   M    + P  + M S+++    + D  LG+ IH  V+R   +     +I  +L
Sbjct: 292 GLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRT--EFGRDPSIHNSL 349

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I MYS  G +  A+ +F+R     +VSWT MISGY  C    + +  +  M  E + P E
Sbjct: 350 IPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDE 409

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           ITI  ++  C  +  L +G  LH    + G      +AN+L+DMY KC+ I  A  +F  
Sbjct: 410 ITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAKCKCIDKALEIFHS 469

Query: 336 MKSKDVMIWNAVISAYA-QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
              K+++ W ++I        C +  F  F    + +++PN VT+V +LS C   GAL  
Sbjct: 470 TLEKNIVSWTSIILGLRINNRCFEALF--FFREMIRRLKPNSVTLVCVLSACARIGALTC 527

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           GK +H +  + G+  D  +  A++DMY +CG +  A++ F  ++  ++  WN ++ GY  
Sbjct: 528 GKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFF-SVDHEVTSWNILLTGYAE 586

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
            G G  A   F  M  S V PN +TFI +L ACS +G+V EG   F+ M +   ++P ++
Sbjct: 587 RGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLEYFNSMKYKYSIMPNLK 646

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HY C+VDLLGR+G L+EA+E I+ MP++P+  VWGALL + ++H +  +GE+AA  I + 
Sbjct: 647 HYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIHHHVELGELAAENIFQD 706

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +  + GY +L+SN+YA   +W+ VA VR++M++  +  +PG S VEV G VH F+
Sbjct: 707 DTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSWVEVKGTVHAFL 761



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 129/392 (32%), Positives = 219/392 (55%), Gaps = 3/392 (0%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           + NAL+ M+   G+LV A Y+F  M  R++ SW+ ++ GY + GL +EAL++   M ++ 
Sbjct: 143 LGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVG 202

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
           ++P       ++     + ++  G+ IH  V+R   +    V +  ALI MY KCG++  
Sbjct: 203 VKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESD--VDVVNALITMYVKCGDVNT 260

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A+ +F+++     +SW  MISGY       EG+RLF  MI+  V P  +T+ S+I  C  
Sbjct: 261 ARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACEL 320

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
           +G  +LG+ +H Y+LR  F    ++ N+L+ MY     I  A T+F   + +D++ W A+
Sbjct: 321 LGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAM 380

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           IS Y       KA E +  M+   + P+E+T+  +LS C+    L+MG  LH   +++GL
Sbjct: 381 ISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGL 440

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
               I+  +L+DMYAKC  ++ A  +F   + ++I  W +++ G  ++    EAL FF +
Sbjct: 441 VSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFRE 500

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           M R  +KPN +T + +L+AC+  G +T GK +
Sbjct: 501 MIRR-LKPNSVTLVCVLSACARIGALTCGKEI 531



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 237/482 (49%), Gaps = 32/482 (6%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPL------------------------ 36
           ++   G  NL + R+ H H+I+  F+ S  +++N L                        
Sbjct: 214 LRTCGGMPNLVRGREIHVHVIRYGFE-SDVDVVNALITMYVKCGDVNTARLVFDKMPNRD 272

Query: 37  -TRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
              +N++++ Y +N      L ++  M K   + D  T+ +++ AC  +    LG++IHG
Sbjct: 273 RISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHG 332

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + ++     D  + N+LI MYS  G +  A  +F     RD+VSW+ MI GY    +P++
Sbjct: 333 YVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQK 392

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           ALE  + M    I P E+ +  ++S  + + ++D+G  +H   V   K       +A +L
Sbjct: 393 ALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHE--VAKQKGLVSYSIVANSL 450

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           IDMY+KC  +  A ++F+   + ++VSWT +I G    N   E +  F EMI   + P+ 
Sbjct: 451 IDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR-LKPNS 509

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T++ ++  C  +G L  GK +HA+ LR G  F   M NA++DMY +C  +  A   F  
Sbjct: 510 VTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFS 569

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +   +V  WN +++ YA+      A ELF  M  S V PNEVT + +L  C+ +G +  G
Sbjct: 570 V-DHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEG 628

Query: 396 -KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYG 453
            ++ ++   K  +  ++     +VD+  + G +  AY    +  +  D  +W A++    
Sbjct: 629 LEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCR 688

Query: 454 MH 455
           +H
Sbjct: 689 IH 690



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 181/346 (52%), Gaps = 2/346 (0%)

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
           L + +  AL+ M+ + GNL  A  +F R+ + ++ SW V++ GY +    +E + L+  M
Sbjct: 139 LSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRM 198

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
           +   V P   T   ++  CG +  L  G+ +H +++R GFE  + + NAL+ MY KC ++
Sbjct: 199 LWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDV 258

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
            +AR +FD M ++D + WNA+IS Y +     +   LF  M    V P+ +TM  +++ C
Sbjct: 259 NTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITAC 318

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
              G   +G+ +H Y+ +     D  +  +L+ MY+  G +  A  +FS    RD+  W 
Sbjct: 319 ELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWT 378

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           AM++GY      ++AL  +  ME  G+ P+ IT   +L+ACS    +  G ++ + +   
Sbjct: 379 AMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHE-VAKQ 437

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
            GLV        ++D+  +   +D+A E+  S  L  N++ W +++
Sbjct: 438 KGLVSYSIVANSLIDMYAKCKCIDKALEIFHST-LEKNIVSWTSII 482



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 139/277 (50%), Gaps = 4/277 (1%)

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           ++LI  C +    + G  +++Y+  +    SL + NAL+ M+ +   +  A  +F  M+ 
Sbjct: 110 VALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEK 169

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +++  WN ++  YA+A   D+A +L+  M    V+P+  T   +L  C     L  G+ +
Sbjct: 170 RNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREI 229

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ + G E DV +  AL+ MY KCGDVN A  +F +   RD   WNAM++GY  +G  
Sbjct: 230 HVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVC 289

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG-LGLVPKIEHYG 517
            E L  F  M +  V P+ +T   ++ AC   G    G+ +   ++    G  P I  + 
Sbjct: 290 LEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLRTEFGRDPSI--HN 347

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            ++ +    GL++EA  +      R +++ W A+++ 
Sbjct: 348 SLIPMYSSVGLIEEAETVFSRTECR-DLVSWTAMISG 383



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 2/198 (1%)

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
           +D+A      M   ++   +   V L+ LC    A + G  +++Y+      + + L  A
Sbjct: 87  LDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLGNA 146

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           L+ M+ + G++  A+ +F     R++  WN ++ GY   G  +EAL  +  M   GVKP+
Sbjct: 147 LLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPD 206

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
             TF  +L  C     +  G+ +   ++   G    ++    ++ +  + G ++ A  + 
Sbjct: 207 VYTFPCVLRTCGGMPNLVRGREIHVHVIR-YGFESDVDVVNALITMYVKCGDVNTARLVF 265

Query: 537 KSMPLRPNMIVWGALLAA 554
             MP R + I W A+++ 
Sbjct: 266 DKMPNR-DRISWNAMISG 282


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 211/573 (36%), Positives = 322/573 (56%), Gaps = 34/573 (5%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQ---MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           IH   IK GL    Y  + LI+   +      L  A  +FD +   +++ W+TM RG+  
Sbjct: 21  IHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHAL 80

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACV----------- 198
              P  AL +   M  + + P+      ++   A       G+ IH  V           
Sbjct: 81  SSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYV 140

Query: 199 --------VRNCKDEKL----------GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
                   V+N + E             V   TALI  Y+  G +  A+++F+ +    V
Sbjct: 141 HTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDV 200

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           VSW  +ISGY       E + LF EM++ NV P E T+++++  C     ++LG+ +H++
Sbjct: 201 VSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSW 260

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           I  +GF  +L + NAL+D+Y KC E+ +A  LF+G+  KDV+ WN +I  Y   +   +A
Sbjct: 261 IDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 320

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK--QGLEVDVILKTALV 418
             LF  M  S   PNEVTM+ +L  C   GA+++G+W+H YI+K  +G+     L+T+L+
Sbjct: 321 LLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLI 380

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           DMYAKCGD+  A ++F   + R +  WNAM+ G+ MHG    A   F  M + G++P+ I
Sbjct: 381 DMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDI 440

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           TF+GLL+ACSH+G++  G+ +F  M     + PK+EHYGCM+DLLG +GL  EA EMI S
Sbjct: 441 TFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINS 500

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDV 598
           M + P+ ++W +LL A K+H N  +GE  A  +++IEP+N G  VL+SNIYA A RWN+V
Sbjct: 501 MEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEV 560

Query: 599 AGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           A  R ++ +  +KK PG SS+E++ +VH+FI G
Sbjct: 561 AKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 593



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 157/512 (30%), Positives = 261/512 (50%), Gaps = 73/512 (14%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           + +I  P L  +N++   +  ++ P SAL +Y  M   G   +++T P +LKACA+    
Sbjct: 60  FDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAF 119

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQM-------------------------------Y 116
             G++IHG  +K G D D YV  +LI M                               Y
Sbjct: 120 REGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGY 179

Query: 117 SECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMI 176
           +  G + SA+ +FDE+P +DVVSW+ +I GY   G  +EALE+ +EM   +++P E  M+
Sbjct: 180 ASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMV 239

Query: 177 SMVSLFADVADVDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNR 234
           +++S  A  A ++LG+ +H+ +     D   G  + I  ALID+Y KCG +  A  LF  
Sbjct: 240 TVLSACAQSASIELGRQVHSWI----DDHGFGSNLKIVNALIDLYIKCGEVETASGLFEG 295

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           L+   V+SW  +I GY   N   E + LF EM+     P+E+T+LS++  C  +G + +G
Sbjct: 296 LSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIG 355

Query: 295 KWLHAYILR--NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
           +W+H YI +   G     ++  +L+DMY KC +I +A+ +FD M ++ +  WNA+I  +A
Sbjct: 356 RWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFA 415

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
                + AF++F  M+   + P+++T VGLLS C+ +G L++G+  H +   + +  D  
Sbjct: 416 MHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGR--HIF---RSMTEDYK 470

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           + T  ++ Y    D+ G   LF EA                      E +I  ++M+   
Sbjct: 471 I-TPKLEHYGCMIDLLGHSGLFKEA----------------------EEMINSMEMD--- 504

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
             P+G+ +  LL AC   G V  G+S    ++
Sbjct: 505 --PDGVIWCSLLKACKMHGNVELGESFAQNLI 534


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 217/607 (35%), Positives = 334/607 (55%), Gaps = 5/607 (0%)

Query: 26  KFSYTNIINP-LTRYNSLVTSYIKNNKPSSA--LNIYAFMRKNGSEVDNFTIPTILKACA 82
           KF +  I N  +  +N ++  Y ++    S+  + ++  MR   +  +  T   +  A +
Sbjct: 60  KFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAS 119

Query: 83  QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
            ++    G+  H  AIK     D +V ++L+ MY + G    AR +FD MP R+ VSW+T
Sbjct: 120 TLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWAT 179

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           MI GY    L  EAL + R MR  +   +E    S++S       V+ GK IH   V+N 
Sbjct: 180 MISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNG 239

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
                 V++  AL+ MY+KCG+L  A Q F   +  + ++W+ MI+GY +  + ++ ++L
Sbjct: 240 LLSI--VSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKL 297

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F+ M    + PSE T + +I  C  +G    GK +H Y+L+ GFE  + +  ALVDMY K
Sbjct: 298 FSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAK 357

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C  I  AR  FD ++  D+++W ++I  Y Q    + A  L+  M++  + PNE+TM  +
Sbjct: 358 CSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASV 417

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           L  C+   ALE GK +H    K G  ++V + +AL  MYAKCG +     +F     RD+
Sbjct: 418 LKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDV 477

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             WNAM++G   +GCG+EAL  F +M+  G KP+ +TF+ +L+ACSH GLV  G   F  
Sbjct: 478 ISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRM 537

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
           M    G+ P++EHY CMVD+L RAG L EA E  +S  +   M +W  +L A + ++N  
Sbjct: 538 MFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYE 597

Query: 563 MGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
           +G  A  +++E+  Q     VL+S+IY+   RW DV  VRR+MK   V KEPG S +E+ 
Sbjct: 598 LGAYAGEKLMELGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELK 657

Query: 623 GLVHKFI 629
             VH F+
Sbjct: 658 SGVHVFV 664



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 148/469 (31%), Positives = 251/469 (53%), Gaps = 13/469 (2%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           GK +H   IK+      Y++N+L+ +Y++C  L  A+++F+ + N+DVVSW+ +I GY +
Sbjct: 25  GKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGYSQ 83

Query: 150 GGL--PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR--NCKDE 205
            G       +E+ + MR  +  P+      + +  + + D   G+  HA  ++  +C+D 
Sbjct: 84  HGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRD- 142

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
              V + ++L++MY K G    A+++F+ + + + VSW  MISGY       E + LF  
Sbjct: 143 ---VFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRL 199

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M  E    +E    S++        +  GK +H   ++NG    +++ NALV MY KC  
Sbjct: 200 MRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGS 259

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           +  A   F+    K+ + W+A+I+ YAQ+   DKA +LF  M +S +RP+E T VG+++ 
Sbjct: 260 LDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSEFTFVGVINA 319

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
           C++ GA   GK +H Y+ K G E  + + TALVDMYAKC  +  A + F      DI +W
Sbjct: 320 CSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLW 379

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV- 504
            +M+ GY  +G  E+AL  +  ME  G+ PN +T   +L ACS    + +GK +  + V 
Sbjct: 380 TSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVK 439

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           +G GL   I     +  +  + G L +   + + MP R ++I W A+++
Sbjct: 440 YGFGLEVPIG--SALSTMYAKCGCLKDGTLVFRRMPAR-DVISWNAMIS 485



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 146/315 (46%), Gaps = 7/315 (2%)

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
             PS  +  + +++      LQ GK LHA I+++     + +AN+LV++Y KC+ +R A+
Sbjct: 2   TLPSNRSFFTALLQYTHNRSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAK 60

Query: 331 TLFDGMKSKDVMIWNAVISAYAQ--AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
            +F+ +++KDV+ WN +I+ Y+Q          ELF  M+     PN  T  G+ +  + 
Sbjct: 61  FVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAST 120

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
                 G+  H    K     DV + ++L++MY K G    A ++F     R+   W  M
Sbjct: 121 LVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATM 180

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           ++GY       EAL  F  M R     N   F  +L+A +   LV  GK +    V   G
Sbjct: 181 ISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKN-G 239

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA--ASKLHKNPSMGEI 566
           L+  +     +V +  + G LD+A +  ++   + N I W A++   A     + ++   
Sbjct: 240 LLSIVSVGNALVTMYAKCGSLDDALQTFETSSDK-NSITWSAMITGYAQSGDSDKALKLF 298

Query: 567 AATQILEIEPQNYGY 581
           ++  +  I P  + +
Sbjct: 299 SSMHLSGIRPSEFTF 313


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 220/658 (33%), Positives = 343/658 (52%), Gaps = 62/658 (9%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           +P   +N L+  +IK  +  SA+N+   M + G+  D+FT+P +LKAC ++     G   
Sbjct: 125 SPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAF 184

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR---DVVSWSTMIRGYHRG 150
           HG    NG + + ++ NAL+ MYS CGSL  A  +FDE+  R   DV+SW++++  + + 
Sbjct: 185 HGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKS 244

Query: 151 GLPEEALEVMREMRFM------DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
                AL++  +M  +      + R   +++++++     +  V   K +H   +RN   
Sbjct: 245 SNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTF 304

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
               V +  ALID Y+KCG +  A ++FN +    VVSW  M++GY +         LF 
Sbjct: 305 PD--VFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFK 362

Query: 265 EMIEENV-----------------------------------FPSEITILSLIIECGFVG 289
            M +EN+                                    P+ +TI+S++  C  +G
Sbjct: 363 NMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLG 422

Query: 290 GLQLGKWLHAYILRN----------GFEFSLAMANALVDMYGKCREIRSARTLFDG--MK 337
               G  +HAY L+N          G +  L + NAL+DMY KCR  ++AR++FD   ++
Sbjct: 423 AFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLE 482

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHM--KVSKVRPNEVTMVGLLSLCTEAGALEMG 395
            ++V+ W  +I  +AQ    + A +LF+ M  +   V PN  T+  +L  C    A+ +G
Sbjct: 483 ERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIG 542

Query: 396 KWLHTYIEKQGL--EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           K +H Y+ +          +   L+DMY+KCGDV+ A  +F     +    W +MM GYG
Sbjct: 543 KQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYG 602

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
           MHG G EAL  F  M ++G  P+ ITF+ +L ACSH G+V +G S FD M    GL P+ 
Sbjct: 603 MHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRA 662

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHY C +DLL R+G LD+A   +K MP+ P  +VW ALL+A ++H N  + E A  +++E
Sbjct: 663 EHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVE 722

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +  +N G   L+SNIYA A RW DVA +R +MK+  +KK PG S V+       F  G
Sbjct: 723 MNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVG 780



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 129/510 (25%), Positives = 230/510 (45%), Gaps = 62/510 (12%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           +   ++  Y  CG+   A  + + +     V W+ +IR + + G  + A+ V   M    
Sbjct: 98  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 157

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
            RP    +  ++    ++     G A H  +   C   +  V I  AL+ MYS+CG+L  
Sbjct: 158 TRPDHFTLPHVLKACGELPSYRCGSAFHGLIC--CNGFESNVFICNALVAMYSRCGSLEE 215

Query: 228 AKQLFNRLNQ---NSVVSWTVMISGYIRCNEINEGVRLFAEMI------EENVFPSEITI 278
           A  +F+ + Q   + V+SW  ++S +++ +     + LF++M         N     I+I
Sbjct: 216 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISI 275

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           ++++  CG +  +   K +H   +RNG    + + NAL+D Y KC  + +A  +F+ M+ 
Sbjct: 276 VNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEF 335

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR------------------------- 373
           KDV+ WNA+++ Y+Q+   + AFELF +M+   +                          
Sbjct: 336 KDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNL 395

Query: 374 ----------PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ----------GLEVDVIL 413
                     PN VT++ +LS C   GA   G  +H Y  K           G + D+++
Sbjct: 396 FRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMV 455

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIY--RDICMWNAMMAGYGMHGCGEEALIFFVDM--E 469
             AL+DMY+KC     A  +F +     R++  W  M+ G+  +G   +AL  FV+M  E
Sbjct: 456 YNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 515

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGL 528
             GV PN  T   +L AC+H   +  GK +   ++ H            C++D+  + G 
Sbjct: 516 PYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGD 575

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +D A  +  SM  + + I W +++    +H
Sbjct: 576 VDTARHVFDSMSQK-SAISWTSMMTGYGMH 604



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 173/336 (51%), Gaps = 16/336 (4%)

Query: 31  NIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           NI   +  + +++  Y +      ALN++  M  +GS  +  TI ++L ACA +     G
Sbjct: 368 NIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 427

Query: 91  KEIHGFAIKN----------GLDGDAYVSNALIQMYSECGSLVSARYLFDEMP--NRDVV 138
            EIH +++KN          G D D  V NALI MYS+C S  +AR +FD++P   R+VV
Sbjct: 428 TEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 487

Query: 139 SWSTMIRGYHRGGLPEEALEVMREM--RFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           +W+ MI G+ + G   +AL++  EM      + P+   +  ++   A +A + +GK IHA
Sbjct: 488 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 547

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
            V+R+ + E     +A  LIDMYSKCG++  A+ +F+ ++Q S +SWT M++GY      
Sbjct: 548 YVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRG 607

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANA 315
           +E + +F +M +    P +IT L ++  C   G +  G  +  +     G          
Sbjct: 608 SEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAC 667

Query: 316 LVDMYGKCREIRSA-RTLFDGMKSKDVMIWNAVISA 350
            +D+  +   +  A RT+ D       ++W A++SA
Sbjct: 668 AIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSA 703



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 174/397 (43%), Gaps = 54/397 (13%)

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
           ++ T ++  Y  CG   YA  +  R+  +  V W ++I  +I+   ++  + +   M+  
Sbjct: 97  SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 156

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
              P   T+  ++  CG +   + G   H  I  NGFE ++ + NALV MY +C  +  A
Sbjct: 157 GTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 216

Query: 330 RTLFDGMKSK---DVMIWNAVISAYAQAHCIDKAFELF------IHMKVSKVRPNEVTMV 380
             +FD +  +   DV+ WN+++SA+ ++     A +LF      +H K +  R + +++V
Sbjct: 217 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 276

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
            +L  C    A+   K +H    + G   DV +  AL+D YAKCG +  A ++F+   ++
Sbjct: 277 NILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 336

Query: 441 DICMWNAM-----------------------------------MAGYGMHGCGEEALIFF 465
           D+  WNAM                                   +AGY   GC  EAL  F
Sbjct: 337 DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLF 396

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV---------PKIEHY 516
             M  SG  PN +T I +L+AC+  G  ++G  +    +    L            +  Y
Sbjct: 397 RQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVY 456

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRP-NMIVWGALL 552
             ++D+  +      A  +   +PL   N++ W  ++
Sbjct: 457 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMI 493


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 210/593 (35%), Positives = 330/593 (55%), Gaps = 30/593 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YNSL++   +    + AL ++  M  +  + D  T+ ++L ACA V     GK+ H +AI
Sbjct: 320 YNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAI 379

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+  D  V  +L+ +Y +C  + +A   F      D ++               ++ +
Sbjct: 380 KAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLN---------------KSFQ 424

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+   I P++    S++     +   DLG+ IH  V++     +  V +++ LIDM
Sbjct: 425 IFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKT--GFQFNVYVSSVLIDM 482

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G L +A ++F RL +N VVSWT MI+GY + ++  E + LF EM ++ +    I  
Sbjct: 483 YAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGF 542

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S I  C  +  L  G+ +HA    +G+   L++ NALV +Y +C ++R A   FD + +
Sbjct: 543 ASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYA 602

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN+++S +AQ+   ++A  +F  M  + +  N  T    +S       + +GK +
Sbjct: 603 KDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQI 662

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I K G + +  +  AL+ +YAKCG +             D   WN+M+ GY  HGCG
Sbjct: 663 HGMIRKTGYDSETEVSNALITLYAKCGTI-------------DDISWNSMITGYSQHGCG 709

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F DM++  V PN +TF+G+L+ACSH GLV EG S F  M     LVPK EHY C
Sbjct: 710 FEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYAC 769

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VDLLGR+GLL  A   ++ MP++P+ +VW  LL+A  +HKN  +GE AA+ +LE+EP++
Sbjct: 770 VVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKD 829

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VL+SN+YAV+ +W+     R++MK+  VKKEPG S VEV+  VH F  G
Sbjct: 830 SATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVHAFFAG 882



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 149/534 (27%), Positives = 261/534 (48%), Gaps = 42/534 (7%)

Query: 15  QCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMR----------- 63
           Q HA  I + F+ S T I NPL      +  Y KN   SSA  ++  ++           
Sbjct: 185 QIHAKTITSGFE-SSTFICNPL------IDLYFKNGFLSSAKKVFENLKARDSVSWVAMI 237

Query: 64  ----KNGSEVDNFTI--PTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYS 117
               +NG E +   +    +L AC +V     GK++HG  +K G   + YV NAL+ +YS
Sbjct: 238 SGLSQNGYEEEAMLLFCQIVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYS 297

Query: 118 ECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMIS 177
             G+L SA  +F  M  RD VS++++I G  + G    AL + ++M     +P  V + S
Sbjct: 298 RSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVAS 357

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
           ++S  A V  +  GK  H+  ++        + +  +L+D+Y KC ++  A + F     
Sbjct: 358 LLSACASVGALPNGKQFHSYAIKAGMTSD--IVVEGSLLDLYVKCSDIKTAHEFF----- 410

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
                       Y + + +N+  ++F +M  E + P++ T  S++  C  +G   LG+ +
Sbjct: 411 ----------LCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQI 460

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           H  +L+ GF+F++ +++ L+DMY K  ++  A  +F  +K  DV+ W A+I+ Y Q    
Sbjct: 461 HTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKF 520

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
            +A  LF  M+   ++ + +     +S C    AL+ G+ +H      G   D+ +  AL
Sbjct: 521 TEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNAL 580

Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
           V +YA+CG V  AY  F +   +D   WN++++G+   G  EEAL  F  M ++G++ N 
Sbjct: 581 VSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINS 640

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
            TF   ++A ++   V  GK +   M+   G   + E    ++ L  + G +D+
Sbjct: 641 FTFGSAVSAAANIANVRIGKQI-HGMIRKTGYDSETEVSNALITLYAKCGTIDD 693



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 162/615 (26%), Positives = 293/615 (47%), Gaps = 50/615 (8%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACA-QVLMTHLGK 91
           I  L+ +N +  ++I          ++  M     E D      +L+ C+   +     +
Sbjct: 125 IRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNAVSFRFVE 184

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           +IH   I +G +   ++ N LI +Y + G L SA+ +F+ +  RD VSW  MI G  + G
Sbjct: 185 QIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNG 244

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
             EEA+ +  ++              ++S    V   + GK +H  V++     +    +
Sbjct: 245 YEEEAMLLFCQI--------------VLSACTKVEFFEFGKQLHGLVLKQGFSSE--TYV 288

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
             AL+ +YS+ GNL+ A+Q+F+ ++Q   VS+  +ISG  +   IN  + LF +M  +  
Sbjct: 289 CNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQ 348

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P  +T+ SL+  C  VG L  GK  H+Y ++ G    + +  +L+D+Y KC +I++A  
Sbjct: 349 KPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHE 408

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
            F                 Y Q   ++K+F++F  M++  + PN+ T   +L  CT  GA
Sbjct: 409 FF---------------LCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGA 453

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
            ++G+ +HT + K G + +V + + L+DMYAK G ++ A ++F      D+  W AM+AG
Sbjct: 454 TDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAG 513

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           Y  H    EAL  F +M+  G+K + I F   ++AC+    + +G+ +  +     G   
Sbjct: 514 YTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLS-GYSD 572

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA--ASKLHKNPSMGEIAAT 569
            +     +V L  R G + EA+     +  + N + W +L++  A   +   ++   A  
Sbjct: 573 DLSIGNALVSLYARCGKVREAYAAFDQIYAKDN-VSWNSLVSGFAQSGYFEEALNIFAQM 631

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR--VKKEPGFSSVEV-NGLVH 626
               +E  ++ +    S + A AN    +A V R+ K+I   ++K    S  EV N L+ 
Sbjct: 632 NKAGLEINSFTFG---SAVSAAAN----IANV-RIGKQIHGMIRKTGYDSETEVSNALIT 683

Query: 627 KFIRGGMVN---WKS 638
            + + G ++   W S
Sbjct: 684 LYAKCGTIDDISWNS 698



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 202/448 (45%), Gaps = 34/448 (7%)

Query: 112 LIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPS 171
           LI  Y   G L  A  +FDEMP R +  W+ +   +    L      + R M   ++   
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFD 162

Query: 172 E-VAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQ 230
           E +  + +     +       + IHA  + +  +      I   LID+Y K G L+ AK+
Sbjct: 163 ERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFES--STFICNPLIDLYFKNGFLSSAKK 220

Query: 231 LFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGG 290
           +F  L     VSW  MISG  +     E + LF +++              +  C  V  
Sbjct: 221 VFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIV--------------LSACTKVEF 266

Query: 291 LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
            + GK LH  +L+ GF     + NALV +Y +   + SA  +F  M  +D + +N++IS 
Sbjct: 267 FEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISG 326

Query: 351 YAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
            AQ   I++A  LF  M +   +P+ VT+  LLS C   GAL  GK  H+Y  K G+  D
Sbjct: 327 LAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSD 386

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
           ++++ +L+D+Y KC D+  A+  F       +C        YG      ++   F  M+ 
Sbjct: 387 IVVEGSLLDLYVKCSDIKTAHEFF-------LC--------YGQLDNLNKSFQIFTQMQI 431

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
            G+ PN  T+  +L  C+  G    G+ +  +++   G    +     ++D+  + G LD
Sbjct: 432 EGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLK-TGFQFNVYVSSVLIDMYAKHGKLD 490

Query: 531 EAHEMIKSMPLRPNMIVWGALLAASKLH 558
            A ++ + +    +++ W A++A    H
Sbjct: 491 HALKIFRRLK-ENDVVSWTAMIAGYTQH 517



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 175/373 (46%), Gaps = 63/373 (16%)

Query: 15  QCHAHIIKTHFKFS-YTNII-----------------------NPLTRYNSLVTSYIKNN 50
           Q H  ++KT F+F+ Y + +                       N +  + +++  Y +++
Sbjct: 459 QIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHD 518

Query: 51  KPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSN 110
           K + ALN++  M+  G + DN    + + ACA +     G++IH  +  +G   D  + N
Sbjct: 519 KFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGN 578

Query: 111 ALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRP 170
           AL+ +Y+ CG +  A   FD++  +D VSW++++ G+ + G  EEAL +  +M    +  
Sbjct: 579 ALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEI 638

Query: 171 SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQ 230
           +     S VS  A++A+V +GK IH  + +   D +    ++ ALI +Y+KCG +     
Sbjct: 639 NSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSE--TEVSNALITLYAKCGTI----- 691

Query: 231 LFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGG 290
                     +SW  MI+GY +     E ++LF +M + +V P+ +T + ++  C  VG 
Sbjct: 692 --------DDISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVG- 742

Query: 291 LQLGKWLHAYILRNGFEFSLAMANA------------LVDMYGKCREIRSARTLFDGMK- 337
                     ++  G  +  +M+ A            +VD+ G+   +  A+   + M  
Sbjct: 743 ----------LVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPI 792

Query: 338 SKDVMIWNAVISA 350
             D M+W  ++SA
Sbjct: 793 QPDAMVWRTLLSA 805


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 209/516 (40%), Positives = 313/516 (60%), Gaps = 11/516 (2%)

Query: 125  ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
            A + +  +   +V SW+++I    RGG   EAL     +R + + P+  +    +   + 
Sbjct: 1968 ATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSA 2027

Query: 185  VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
            + D+  G+  H        +  L V+  +ALIDMYSKCG L  A+ LF+ +   +VVSWT
Sbjct: 2028 LCDLVSGRMSHQQAFVFGFETDLFVS--SALIDMYSKCGQLKDARALFDEIPLRNVVSWT 2085

Query: 245  VMISGYIRCNEINEGVRLFAEMIEE--------NVFPSEITILSLIIECGFVGGLQLGKW 296
             MI+GY++  + +  + LF + +EE        NV    + ++S++  C  V G  + + 
Sbjct: 2086 SMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEG 2145

Query: 297  LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
            +H ++++ GF+ S+ + N L+D Y KC +   ++ +FD M+ KD + WN++I+ YAQ+  
Sbjct: 2146 VHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGL 2205

Query: 357  IDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
              +A E+F  M +   VR N VT+  +L  C  AGAL  GK +H  + K  LE +V + T
Sbjct: 2206 SGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGT 2265

Query: 416  ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
            +++DMY KCG V  A + F     +++  W AM+AGYGMHG  +EAL  F  M R+GVKP
Sbjct: 2266 SIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKP 2325

Query: 476  NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEM 535
            N ITF+ +L ACSHAGLV EG   F+ M H   + P IEHYGCMVDL GRAG L+EA+ +
Sbjct: 2326 NYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNL 2385

Query: 536  IKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRW 595
            IK M ++P+ +VWG+LL A ++HKN  +GEIAA ++ E++P N GY VL+SN+YA A RW
Sbjct: 2386 IKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRW 2445

Query: 596  NDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             DV  +R +MK  ++ K PGFS VE+ G VH F+ G
Sbjct: 2446 ADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVG 2481



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 136/417 (32%), Positives = 211/417 (50%), Gaps = 52/417 (12%)

Query: 192 KAIHACVVRN-CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           + IHA ++R+   +++L   +   LI +YS  G +AYA  LF ++      +W ++I   
Sbjct: 44  RQIHAKIIRSGLSNDQL---LTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLII--- 97

Query: 251 IRCNEIN----EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
            R N IN    + + L+  M+ + +   + T   +I  C     + LGK +H  +++ GF
Sbjct: 98  -RANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGF 156

Query: 307 EFSLAMANALVDMYGKCREIR-------------------------------SARTLFDG 335
              + + N L+D Y KC   R                                AR +FD 
Sbjct: 157 SGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDE 216

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           + SK+V+ W A+I+ Y +    ++A ELF  M+   + PNE TMV L+  CTE G L +G
Sbjct: 217 IPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG 276

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H Y  K  +E+ V L TAL+DMY+KCG +  A  +F     + +  WN+M+   G+H
Sbjct: 277 RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVH 336

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G G+EAL  F +MER  VKP+ ITFIG+L AC H   V EG + F +M    G+ P  EH
Sbjct: 337 GLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEH 396

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           Y CM +L  R+  LDEA +  K +         G+L  +  +  +    ++A TQ+L
Sbjct: 397 YECMTELYARSNNLDEAFKSTKEV---------GSLANSPSICFDARAKQVAWTQLL 444



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 237/455 (52%), Gaps = 20/455 (4%)

Query: 14   RQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT 73
            R+ H+++    +K+   + ++    +NS++    +      AL  ++ +RK G      +
Sbjct: 1961 REDHSNLATWFYKYVDKSNVHS---WNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSS 2017

Query: 74   IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
             P  +K+C+ +     G+  H  A   G + D +VS+ALI MYS+CG L  AR LFDE+P
Sbjct: 2018 FPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIP 2077

Query: 134  NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD----------IRPSEVAMISMVSLFA 183
             R+VVSW++MI GY +    + AL + ++  F++          +    V M+S++S  +
Sbjct: 2078 LRNVVSWTSMITGYVQNEQADNALLLFKD--FLEEETEVEDGNNVPLDSVVMVSVLSACS 2135

Query: 184  DVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSW 243
             V+   + + +H  VV+   D  +GV     L+D Y+KCG    +K++F+ + +   +SW
Sbjct: 2136 RVSGKGITEGVHGFVVKKGFDGSIGV--GNTLMDAYAKCGQPLVSKKVFDWMEEKDDISW 2193

Query: 244  TVMISGYIRCNEINEGVRLFAEMIEE-NVFPSEITILSLIIECGFVGGLQLGKWLHAYIL 302
              MI+ Y +     E + +F  M+    V  + +T+ ++++ C   G L+ GK +H  ++
Sbjct: 2194 NSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVI 2253

Query: 303  RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
            +   E+++ +  +++DMY KC  +  A+  FD MK K+V  W A+++ Y       +A +
Sbjct: 2254 KMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALD 2313

Query: 363  LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMY 421
            +F  M  + V+PN +T V +L+ C+ AG +E G  W +    K  +E  +     +VD++
Sbjct: 2314 IFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLF 2373

Query: 422  AKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
             + G +N AY L     +  D  +W +++    +H
Sbjct: 2374 GRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIH 2408



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 189/396 (47%), Gaps = 45/396 (11%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +L+ C      HL ++IH   I++GL  D  ++  LI +YS  G +  A  LF ++ N  
Sbjct: 33  LLQNCKN--FKHL-RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
             +W+ +IR     GL E+AL + + M    I   +     ++    +   +DLGK +H 
Sbjct: 90  TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149

Query: 197 CVVRNCKDEKLG----VAIATALIDMYSK------------------------------- 221
            ++      K G    V +   LID Y K                               
Sbjct: 150 SLI------KYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLIS 203

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
           CG+L  A+++F+ +   +VVSWT MI+GYIR  +  E + LF  M  EN+FP+E T++SL
Sbjct: 204 CGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSL 263

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           I  C  +G L LG+ +H Y ++N  E  + +  AL+DMY KC  I+ A  +F+ M  K +
Sbjct: 264 IKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSL 323

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHT 400
             WN++I++        +A  LF  M+   V+P+ +T +G+L  C     ++ G  +   
Sbjct: 324 PTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTR 383

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
             +  G+         + ++YA+  +++ A++   E
Sbjct: 384 MTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKE 419



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 162/329 (49%), Gaps = 39/329 (11%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHFKFSYT-----NIINPLT-RYNSLVTSYIKNNKPSSAL 56
           I++G  N +   +   H+  TH + +Y       I NP T  +N ++ +   N     AL
Sbjct: 51  IRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGLSEQAL 110

Query: 57  NIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMY 116
            +Y  M   G   D FT P ++KAC   L   LGK +HG  IK G  GD +V N LI  Y
Sbjct: 111 MLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFY 170

Query: 117 SECGSLVSARYLFDEMPNRDVVSWST-------------------------------MIR 145
            +CG    A  +F++M  R+VVSW+T                               MI 
Sbjct: 171 FKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMIN 230

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           GY R   PEEALE+ + M+  +I P+E  M+S++    ++  + LG+ IH   ++NC + 
Sbjct: 231 GYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIE- 289

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
            +GV + TALIDMYSKCG++  A ++F  + + S+ +W  MI+         E + LF+E
Sbjct: 290 -IGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSE 348

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLG 294
           M   NV P  IT + ++  C  +  ++ G
Sbjct: 349 MERVNVKPDAITFIGVLCACVHIKNVKEG 377



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 117/225 (52%), Gaps = 21/225 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++  YI+N +P  AL ++  M+      + +T+ +++KAC ++ +  LG+ IH +AI
Sbjct: 225 WTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAI 284

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KN ++   Y+  ALI MYS+CGS+  A  +F+ MP + + +W++MI      GL +EAL 
Sbjct: 285 KNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALN 344

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT----A 214
           +  EM  ++++P  +  I ++     + +V  G     C       +  G+A        
Sbjct: 345 LFSEMERVNVKPDAITFIGVLCACVHIKNVKEG-----CAYFTRMTQHYGIAPIPEHYEC 399

Query: 215 LIDMYSKCGNLAYA----KQLFNRLNQNSV--------VSWTVMI 247
           + ++Y++  NL  A    K++ +  N  S+        V+WT ++
Sbjct: 400 MTELYARSNNLDEAFKSTKEVGSLANSPSICFDARAKQVAWTQLL 444


>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 787

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 206/573 (35%), Positives = 329/573 (57%), Gaps = 6/573 (1%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLM 86
           + ++ +P L  +N+++  Y+       AL ++  M  +G    D +T P ++KAC+ + M
Sbjct: 140 FDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSM 199

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
            ++G  IHG A+ +G   + +V N+L+ MY  CG +  AR +F+ M  R VVSW+TMI G
Sbjct: 200 LNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISG 259

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           + + G PEEAL V   M    + P    ++S +     + +++LG  +H  V +N   EK
Sbjct: 260 WFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEK 319

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
             + +  AL+DMYS+CG +  A  +F    +  V++WT MI+GYI        + L   M
Sbjct: 320 --IEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAM 377

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
             + V P+ +T+ SL+  C  +  L+ GK LHA+++R   +  + +  AL+DMY KC  +
Sbjct: 378 QLDGVVPNAVTLASLLSACASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAV 437

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             +  +F     K  + WNA++S         +A  LF  M + +V  N  T   ++   
Sbjct: 438 SYSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAY 497

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI--YRDICM 444
                L+    LH+Y+ + G    + + T L+DMY+KCG ++ A+++F E     +DI +
Sbjct: 498 AILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIV 557

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           W+ ++AGYGMHG GE A++ F  M  SG++PN ITF  +L+ACSH GLV +G ++F  M+
Sbjct: 558 WSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMI 617

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
                 P   HY C+VDLLGRAG LDEA+++IKSMP + N  +WGALL A  +H+N  +G
Sbjct: 618 ENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELG 677

Query: 565 EIAATQILEIEPQNYGYNVLMSNIYAVANRWND 597
           E+AA ++ E+EP++ G  +L++NIYA   RW D
Sbjct: 678 EVAAERLFELEPESTGNYILLANIYAAVGRWKD 710



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 243/473 (51%), Gaps = 8/473 (1%)

Query: 91  KEIHGFAIKNGLDGDA---YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
           K +HG  I +GL       ++ + L   Y+ CG +  AR LFD++ +  +  W+ +I+ Y
Sbjct: 99  KILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMY 158

Query: 148 HRGGLPEEALEVMREMRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
              G   +AL V   M       P +     ++   + ++ +++G  IH   + +     
Sbjct: 159 VDKGFHFDALRVFDSMICSGKCWPDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSN 218

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
           + V    +L+ MY  CG +  A+Q+FN + + SVVSW  MISG+ +     E + +F  M
Sbjct: 219 MFVQ--NSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSM 276

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
           ++  V P   TI+S +  CG +  L+LG  +H  + +N  +  + + NALVDMY +C  +
Sbjct: 277 MDARVEPDSATIVSALPSCGHLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGM 336

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             A  +F   K KDV+ W ++I+ Y        A  L   M++  V PN VT+  LLS C
Sbjct: 337 DEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSAC 396

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
                L+ GK LH ++ ++ L+ DV++ TAL+DMYAKC  V+ ++++F++   +    WN
Sbjct: 397 ASLCCLKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWN 456

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           A+++G   +    EA+  F  M    V+ N  TF  ++ A +    + +  ++   +V  
Sbjct: 457 ALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYLVRS 516

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR-PNMIVWGALLAASKLH 558
            G + KI     ++D+  + G LD AH++   +P +  ++IVW  L+A   +H
Sbjct: 517 -GFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMH 568


>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Cucumis sativus]
          Length = 781

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/629 (35%), Positives = 351/629 (55%), Gaps = 54/629 (8%)

Query: 52  PSSALNIYAFMRKNGSEVDNFTIPTIL-------KACAQVL-----MTHLGKEIHGFAIK 99
           P S +    F+ ++ S   +  +P +L       K+C + L     M  L K+I     +
Sbjct: 111 PLSIIRRVQFISRHFSSSPHL-VPVLLRISKLTKKSCIECLRNCKSMDQL-KQIQSQIFR 168

Query: 100 NGLDGDAYVSNALIQMY--SECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
            GL+GD    N L+     S  G+L  A  +F+ + +  +  ++ M++ Y + G+  + L
Sbjct: 169 IGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVL 228

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            + +++R   + P       ++     + DV  G+ +   +V+   D  L   +  +LID
Sbjct: 229 LLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMD--LDNYVYNSLID 286

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPSEI 276
           MY +  N+  AK+LF+ +     VSW VMISGY+RC    + +  F EM +E N  P E 
Sbjct: 287 MYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEA 346

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR------------ 324
           T++S +  C  +  L+LG  +H Y+ R    F+  + NAL+DMY KC             
Sbjct: 347 TVVSTLSACTALKNLELGDEIHNYV-RKELGFTTRIDNALLDMYAKCGCLNIARNIFDEM 405

Query: 325 -------------------EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
                              ++R AR LFD    +DV++W A+I+ Y Q H  D A  LF 
Sbjct: 406 SMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFR 465

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            M++ +V+P++ T+V LL+ C + GALE GKW+H Y+++  + +DV++ TAL++MY+KCG
Sbjct: 466 EMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCG 525

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
            V+ +  +F E   +D   W +++ G  M+G   EAL  F +MER G KP+ ITFIG+L+
Sbjct: 526 CVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLS 585

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
           ACSH GLV EG+  F+ M     + PK+EHYGC++DLLGRAGLLDEA E+I+ +P+    
Sbjct: 586 ACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCE 645

Query: 546 IV---WGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVR 602
           IV   +GALL+A ++H N  MGE  A ++  IE  +   + L++NIYA  +RW D   VR
Sbjct: 646 IVVPLYGALLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVR 705

Query: 603 RVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           R MKE+ VKK PG S +EV+G+VH+F+ G
Sbjct: 706 RKMKELGVKKMPGCSLIEVDGIVHEFLVG 734



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 135/431 (31%), Positives = 219/431 (50%), Gaps = 36/431 (8%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN +V  Y K       L ++  +R++G   D FT P +LKA   +     G+++ GF +
Sbjct: 211 YNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIV 270

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+D D YV N+LI MY E  ++ +A+ LFDEM  RD VSW+ MI GY R    E+A+ 
Sbjct: 271 KTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFEDAIN 330

Query: 159 VMREMRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
             REM+   + +P E  ++S +S    + +++LG  IH  V    K+      I  AL+D
Sbjct: 331 TFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVR---KELGFTTRIDNALLD 387

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE------------------- 258
           MY+KCG L  A+ +F+ ++  +V+ WT MISGYI C ++ E                   
Sbjct: 388 MYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAM 447

Query: 259 ------------GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
                        V LF EM  + V P + T+++L+  C  +G L+ GKW+H Y+  N  
Sbjct: 448 INGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRI 507

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
              + +  AL++MY KC  +  +  +F  ++ KD   W ++I   A      +A  LF  
Sbjct: 508 TMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLFSE 567

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK-QGLEVDVILKTALVDMYAKCG 425
           M+    +P+++T +G+LS C+  G +E G+     ++K   +E  V     ++D+  + G
Sbjct: 568 MERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAG 627

Query: 426 DVNGAYRLFSE 436
            ++ A  L  E
Sbjct: 628 LLDEAEELIQE 638



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 125/248 (50%), Gaps = 7/248 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++  Y++ +    A+ ++  M+    + D FT+ T+L  CAQ+     GK IHG+  
Sbjct: 444 WTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLD 503

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +N +  D  V  ALI+MYS+CG +  +  +F E+ ++D  SW+++I G    G   EAL 
Sbjct: 504 ENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALR 563

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  EM  +  +P ++  I ++S  +    V+ G+     + +  + E   V     +ID+
Sbjct: 564 LFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEP-KVEHYGCVIDL 622

Query: 219 YSKCGNLAYAKQLFNRL---NQNSVVS-WTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
             + G L  A++L   +   N   VV  +  ++S     N ++ G RL  ++  EN+   
Sbjct: 623 LGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKL--ENIESC 680

Query: 275 EITILSLI 282
           + +I +L+
Sbjct: 681 DSSIHTLL 688


>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
 gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 217/656 (33%), Positives = 358/656 (54%), Gaps = 43/656 (6%)

Query: 9   NLEQTRQCHAHIIK--------------THFKFSYTN----IINPLTR-----YNSLVTS 45
           +L  T+Q HAH+I               T+    Y +    + + L +     YN ++  
Sbjct: 36  SLTSTKQLHAHLITSGLLSIDIRSVLVATYAHCGYVHNARKLFDELRQRGTLLYNFMIKM 95

Query: 46  YIKNNKPSSALNIYAFMRKNGSE---VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           YI       A+ +  F+   GS+    DN+T P ++KAC+++L+   G+ +HG  + +  
Sbjct: 96  YIAKGDYFEAMKV--FLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKF 153

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
               +V N+L+ MY  CG +  AR +FD M  + VVSW+TMI GY + G    AL V  +
Sbjct: 154 GSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQ 213

Query: 163 MRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC 222
           M    +     +++S++     + ++++G+ +H  V      +K+   ++ AL+DMY+KC
Sbjct: 214 MVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKI---VSNALVDMYAKC 270

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI 282
           G++  A+ +F+ + +  VVSWT MI+GYI   +    + LF  M  E + P+ +TI  ++
Sbjct: 271 GSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALIL 330

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
           + C  +  L+ G+ LH ++++      +A+  +L+DMY KC  +  + ++F     K  +
Sbjct: 331 LACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTV 390

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
            WNA++S         +A  LF  M +  V  N  T   LL        L+    +++Y+
Sbjct: 391 PWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYL 450

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE--AIYRDICMWNAMMAGYGMHGCGEE 460
            + G   ++ + T+L+D+Y+KCG +  A+++F+      +DI +W+ ++AGYGMHG GE 
Sbjct: 451 MRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGET 510

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           A+  F  M +SGVKPN +TF  +L +CSHAG+V +G  +F  M+     +P  +HY CMV
Sbjct: 511 AVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYTCMV 570

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYG 580
           DLLGRAG +DEA+++IK+MP  P   VWGALL A  +H+N  +GE+AA  + E+EP N G
Sbjct: 571 DLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARWLFELEPGNTG 630

Query: 581 YNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNW 636
             VL++ +YA   RW D   VR+ M +I ++K P           H  I  G VNW
Sbjct: 631 NYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPA----------HSLIEAGTVNW 676



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/501 (28%), Positives = 259/501 (51%), Gaps = 26/501 (5%)

Query: 83  QVLMTHLG--------KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN 134
           Q L+ H G        K++H   I +GL     + + L+  Y+ CG + +AR LFDE+  
Sbjct: 25  QSLLKHYGAAQSLTSTKQLHAHLITSGLL-SIDIRSVLVATYAHCGYVHNARKLFDELRQ 83

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMR-FMDIRPSEVAMISMVSLFADVADVDLGKA 193
           R  + ++ MI+ Y   G   EA++V  EM    D  P       ++   +++  V+ G+ 
Sbjct: 84  RGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRV 143

Query: 194 IHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           +H   + +    K G  + +  +L+ MY  CG +  A+++F+ + + SVVSW  MI+GY 
Sbjct: 144 LHGLTLVS----KFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYF 199

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +    N  + +F +M++  V     +++S++  CG++  L++G+ +H  +        + 
Sbjct: 200 KNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGKKI- 258

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           ++NALVDMY KC  +  AR +FD M  +DV+ W ++I+ Y        A  LF  M++  
Sbjct: 259 VSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEG 318

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           +RPN VT+  +L  C     L+ G+ LH ++ KQ L  +V ++T+L+DMYAKC  +  ++
Sbjct: 319 LRPNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSF 378

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
            +F+    +    WNA+++G   +    EA+  F  M   GV+ N  T   LL A    G
Sbjct: 379 SVFTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPA---YG 435

Query: 492 LVTEGKSV--FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR-PNMIVW 548
           ++ + + V   +  +   G V  I+    ++D+  + G L+ AH++  ++P+   ++ VW
Sbjct: 436 ILADLQPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVW 495

Query: 549 GALLAASKLHKNPSMGEIAAT 569
             ++A   +H +   GE A +
Sbjct: 496 SIIIAGYGMHGH---GETAVS 513



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 191/388 (49%), Gaps = 7/388 (1%)

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
           + P      S++  +     +   K +HA ++ +     L + I + L+  Y+ CG +  
Sbjct: 17  LAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITS---GLLSIDIRSVLVATYAHCGYVHN 73

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI-EENVFPSEITILSLIIECG 286
           A++LF+ L Q   + +  MI  YI   +  E +++F EM+  ++  P   T   +I  C 
Sbjct: 74  ARKLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACS 133

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
            +  ++ G+ LH   L + F   L + N+L+ MY  C E+  AR +FD MK K V+ WN 
Sbjct: 134 ELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNT 193

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           +I+ Y +    + A  +F  M  S V  +  ++V +L  C     LE+G+ +H  +E++ 
Sbjct: 194 MINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKV 253

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
           L   ++   ALVDMYAKCG ++ A  +F   + RD+  W +M+ GY ++G  + AL  F 
Sbjct: 254 LGKKIV-SNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFK 312

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRA 526
            M+  G++PN +T   +L AC+    + +G+ +    V    L  ++     ++D+  + 
Sbjct: 313 IMQIEGLRPNSVTIALILLACASLNNLKDGRCLHG-WVMKQRLYSEVAVETSLIDMYAKC 371

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAA 554
             L  +  +      R   + W ALL+ 
Sbjct: 372 NCLGLSFSVFTRTS-RKKTVPWNALLSG 398


>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
 gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
          Length = 535

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 201/532 (37%), Positives = 310/532 (58%), Gaps = 5/532 (0%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G EIH FA + G+D D  V+  ++ MY+ CG + +A+ LF E+  RD+V+WS +I  + +
Sbjct: 7   GTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIAAFVQ 66

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
            G P+EAL + R M+   ++ ++V ++S +   A+V+ + LGK++H C V+   D  L +
Sbjct: 67  SGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVD--LDI 124

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
           ++ TAL+ MY+KCG  A A  LFNR+    VV+W  MI+GY +  E    + +F ++   
Sbjct: 125 SVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKLQLS 184

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            + P+  T++ L+     +  L  G  +H  I++ GFE    +  AL+DMY KC  +  A
Sbjct: 185 ELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSLSGA 244

Query: 330 RTLFDGMKS-KDVMIWNAVISAYAQA-HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
             LF      KD + WN +I+ Y  + H ID AF  F  MK+  ++PN VT+V +L    
Sbjct: 245 EFLFHRTGCRKDEVSWNVMIAGYMHSGHAID-AFSAFCQMKLENIQPNIVTIVTVLPAVA 303

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
              AL  G  LH Y+ + G +    +   L+DMYAKCG ++ + ++F E   +D   WN 
Sbjct: 304 HLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNV 363

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           M+AGY +HG G  A+  F  M+ S ++ +  +FI +L+AC HAGL+ EG+ +FD M    
Sbjct: 364 MLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQH 423

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
            L P +EHY CM DLLGRAGL +E  ++IKSMP+ P+  VWGALL AS +H N  + E A
Sbjct: 424 QLEPDLEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQLAEFA 483

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
              + ++E +N  +   +SN YA + RW DV   R  + +  ++K PG+S V
Sbjct: 484 LHHLDKLEHKNLTHYAALSNTYARSGRWADVGNTRSKITKTGLRKSPGYSWV 535



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 138/423 (32%), Positives = 235/423 (55%), Gaps = 5/423 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +++++ +++++  P  AL+++  M+  G + +   + + L ACA+V    LGK +H 
Sbjct: 54  LVAWSAIIAAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHC 113

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+K  +D D  V  AL+ MY++CG    A  LF+ MP +DVV+W+ MI GY + G P  
Sbjct: 114 CAVKANVDLDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFP 173

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           ALE+  +++  ++ P+   M+ ++  FA + D+D G  IH  +++ C  E     + TAL
Sbjct: 174 ALEMFHKLQLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIK-CGFES-ECHVKTAL 231

Query: 216 IDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           IDMY+KCG+L+ A+ LF+R   +   VSW VMI+GY+      +    F +M  EN+ P+
Sbjct: 232 IDMYAKCGSLSGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPN 291

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            +TI++++     +  L+ G  LHAY++R GF+    + N L+DMY KC  +  +  +F 
Sbjct: 292 IVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFH 351

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            MK+KD + WN +++ YA       A ELF  M+ S++R +  + + +LS C  AG +  
Sbjct: 352 EMKNKDTVSWNVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGE 411

Query: 395 GKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGY 452
           G+ +   + KQ  LE D+     + D+  + G  N    L  S  +  D  +W A++   
Sbjct: 412 GRKIFDSMSKQHQLEPDLEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALLGAS 471

Query: 453 GMH 455
            MH
Sbjct: 472 TMH 474



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 5/205 (2%)

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           AL  G  +H +  +QG++ DV + T ++ MYA+CG+V+ A +LF E   RD+  W+A++A
Sbjct: 3   ALGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAIIA 62

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
            +   G  +EAL  F  M+  G++ N +  +  L AC+    +  GKS+    V    + 
Sbjct: 63  AFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKA-NVD 121

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA--ASKLHKNPSMGEIAA 568
             I     +V +  + G    A  +   MP + +++ W A++   A      P++     
Sbjct: 122 LDISVGTALVSMYAKCGFFALALTLFNRMPCK-DVVTWNAMINGYAQIGEPFPALEMFHK 180

Query: 569 TQILEIEPQNYGYNVLMSNIYAVAN 593
            Q+ E+ P N G  V +   +A+ N
Sbjct: 181 LQLSELNP-NSGTMVGLLPAFALLN 204



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 75/156 (48%)

Query: 25  FKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV 84
           F F  T        +N ++  Y+ +     A + +  M+    + +  TI T+L A A +
Sbjct: 246 FLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHL 305

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
                G  +H + I+ G      V N LI MY++CG L  +  +F EM N+D VSW+ M+
Sbjct: 306 SALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSWNVML 365

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
            GY   G    A+E+   M+  +IR    + I+++S
Sbjct: 366 AGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLS 401


>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial-like [Glycine max]
          Length = 615

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 207/600 (34%), Positives = 333/600 (55%), Gaps = 5/600 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N ++     N   +  LNIY+ M  +G   +N T P +LKACA +     G  +HG
Sbjct: 11  LYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTMLHG 70

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K G   D +V  AL+ MYS+C  + SAR +FDEMP R VVSW+ M+  Y R    ++
Sbjct: 71  HVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSMDQ 130

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVD---LGKAIHACVVRNCKDEKLGVAIA 212
           AL +++EM  +   P+    +S++S ++++   +   LGK+IH C+++      L V++A
Sbjct: 131 ALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIK-LGIVYLEVSLA 189

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            +L+ MY +   +  A+++F+ +++ S++SWT MI GY++     E   LF +M  ++V 
Sbjct: 190 NSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVG 249

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
              +  L+LI  C  V  L L   +H+ +L+ G      + N L+ MY KC  + SAR +
Sbjct: 250 IDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRI 309

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FD +  K ++ W ++I+ Y       +A +LF  M  + +RPN  T+  ++S C + G+L
Sbjct: 310 FDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGSL 369

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
            +G+ +  YI   GLE D  ++T+L+ MY+KCG +  A  +F     +D+ +W +M+  Y
Sbjct: 370 SIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMINSY 429

Query: 453 GMHGCGEEALIFFVDMERS-GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
            +HG G EA+  F  M  + G+ P+ I +  +  ACSH+GLV EG   F  M    G+ P
Sbjct: 430 AIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGITP 489

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
            +EH  C++DLLGR G LD A   I+ MP      VWG LL+A ++H N  +GE+A  ++
Sbjct: 490 TVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVELGELATVRL 549

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           L+  P + G  VLM+N+Y    +W +   +R  M    + KE G+S VEV    H F  G
Sbjct: 550 LDSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSMDGKGLVKESGWSQVEVTDTYHTFAVG 609



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 220/432 (50%), Gaps = 16/432 (3%)

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           R + +W+ MIR     G   + L +   M    +  + +    ++   A++  +  G  +
Sbjct: 9   RSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTML 68

Query: 195 HACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           H  V+      KLG      + TAL+DMYSKC ++A A+Q+F+ + Q SVVSW  M+S Y
Sbjct: 69  HGHVL------KLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAY 122

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ---LGKWLHAYILRNGFE 307
            R + +++ + L  EM      P+  T +S++     +   +   LGK +H  +++ G  
Sbjct: 123 SRRSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIV 182

Query: 308 F-SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
           +  +++AN+L+ MY +   +  AR +FD M  K ++ W  +I  Y +     +A+ LF  
Sbjct: 183 YLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQ 242

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           M+   V  + V  + L+S C +   L +   +H+ + K G      ++  L+ MYAKCG+
Sbjct: 243 MQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGN 302

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           +  A R+F   I + +  W +M+AGY   G   EAL  F  M R+ ++PNG T   +++A
Sbjct: 303 LTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSA 362

Query: 487 CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
           C+  G ++ G+ + ++ +   GL    +    ++ +  + G + +A E+ + +  + ++ 
Sbjct: 363 CADLGSLSIGQEI-EEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDK-DLT 420

Query: 547 VWGALLAASKLH 558
           VW +++ +  +H
Sbjct: 421 VWTSMINSYAIH 432



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 152/322 (47%), Gaps = 6/322 (1%)

Query: 237 QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
           + S+ +W +MI          + + +++ M    V  + +T   L+  C  +  +Q G  
Sbjct: 8   RRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTM 67

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           LH ++L+ GF+    +  ALVDMY KC  + SAR +FD M  + V+ WNA++SAY++   
Sbjct: 68  LHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSS 127

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE---MGKWLHTYIEKQGL-EVDVI 412
           +D+A  L   M V    P   T V +LS  +   + E   +GK +H  + K G+  ++V 
Sbjct: 128 MDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVS 187

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           L  +L+ MY +   ++ A ++F     + I  W  M+ GY   G   EA   F  M+   
Sbjct: 188 LANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQS 247

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
           V  + + F+ L++ C     +    SV   +V   G   K      ++ +  + G L  A
Sbjct: 248 VGIDFVVFLNLISGCIQVRDLLLASSV-HSLVLKCGCNEKDPVENLLITMYAKCGNLTSA 306

Query: 533 HEMIKSMPLRPNMIVWGALLAA 554
              I  + +  +M+ W +++A 
Sbjct: 307 RR-IFDLIIEKSMLSWTSMIAG 327


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 209/596 (35%), Positives = 334/596 (56%), Gaps = 2/596 (0%)

Query: 36   LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
            +  + +LV  +    +   A  ++  +R  G EV+ F + T+LK    +    L   +H 
Sbjct: 496  MVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHA 555

Query: 96   FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             A K G D +A+V +ALI  YS CG +  AR +FD +  +D V+W+ M+  Y     PE 
Sbjct: 556  CACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSCYSENDCPEN 615

Query: 156  ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
             L++  +MR    + +  A+ S++     ++ V LGK IHAC V+   D +  V    AL
Sbjct: 616  TLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTERHVY--GAL 673

Query: 216  IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
            +DMY+KCGN+  A+  F  +  + V+ W++MIS Y +CN+  +   LF  M+  +V P+E
Sbjct: 674  LDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNE 733

Query: 276  ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
             ++ S++  C  +  L LGK +H + ++ G E  L + NAL+D+Y KC ++ S+  +F  
Sbjct: 734  FSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSDMESSLEIFSS 793

Query: 336  MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
            ++  + + WN +I  Y+++   + A  +F  M+ + V   +VT   +L  C    ++   
Sbjct: 794  LRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHV 853

Query: 396  KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
              +H  IEK     D I+  +L+D YAKCG +  A  +F      D+  WNA+++GY +H
Sbjct: 854  GQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVH 913

Query: 456  GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
            G    A   F  M ++ +K N ITF+ LL+ C   GLV++G S+FD M    G+ P +EH
Sbjct: 914  GQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEH 973

Query: 516  YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
            Y C+V LLGRAG L++A   I  +P  P+ +VW ALL++  +HKN  +G  +A ++LEIE
Sbjct: 974  YTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVHKNVELGRFSAEKVLEIE 1033

Query: 576  PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            PQ+    VL+SN+Y+ A   + VA  R+ M+ I V+KEPG S VE+ G VH F  G
Sbjct: 1034 PQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSWVEIKGEVHAFSVG 1089



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 143/511 (27%), Positives = 263/511 (51%), Gaps = 30/511 (5%)

Query: 69  VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG--LDGDAYVSNALIQMYSECGSLVSAR 126
           VD++    +L+ C        G+ +HG  +++G     D + +N L+ MY++ G   SA 
Sbjct: 426 VDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAH 485

Query: 127 YLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            +FD +P R++VS+ T+++G+   G  EEA  + + +R+     ++  + +++ L   + 
Sbjct: 486 RVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMD 545

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
            + L   +HAC  +   D      + +ALID YS CG ++ A+++F+ +     V+WT M
Sbjct: 546 TLGLAWGVHACACKLGHDRN--AFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAM 603

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           +S Y   +     +++F++M       +   + S++     +  + LGK +HA  ++  +
Sbjct: 604 VSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLY 663

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
           +    +  AL+DMY KC  I  AR  F+ + + DV++W+ +IS YAQ +  ++AFELFI 
Sbjct: 664 DTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIR 723

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           M  S V PNE ++  +L  C     L++GK +H +  K G E ++ +  AL+D+YAKC D
Sbjct: 724 MMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCSD 783

Query: 427 VNGAYRLFSEAIYRDI--CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
           +  +  +FS    RD+    WN ++ GY   G GE AL  F +M  + V    +T+  +L
Sbjct: 784 MESSLEIFSS--LRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVTYSSVL 841

Query: 485 NACS------HAGLV--TEGKSVF--DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
            AC+      H G V     KS F  D +V              ++D   + G + +A E
Sbjct: 842 RACASTASINHVGQVHCLIEKSTFNSDTIVS-----------NSLIDSYAKCGCIRDARE 890

Query: 535 MIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
           + +++    +++ W A+++   +H   +M +
Sbjct: 891 IFETLK-ECDLVSWNAIISGYAVHGQAAMAQ 920


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 203/596 (34%), Positives = 328/596 (55%), Gaps = 9/596 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +N L+  +  N  P S+L+++A +RK+   + ++ T    + A +       G+ IHG A
Sbjct: 86  FNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQA 145

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           + +G D +  + + +++MY +   +  AR +FD MP +D + W+TMI GY +  +  E++
Sbjct: 146 VVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESI 205

Query: 158 EVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRN-CKDEKLGVAIATAL 215
           +V R++      R     ++ ++   A++ ++ LG  IH+   +  C        + T  
Sbjct: 206 QVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY---VLTGF 262

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I +YSKCG +     LF    +  +V++  MI GY    E    + LF E++        
Sbjct: 263 ISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS 322

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T++SL+      G L L   +H Y L++ F    +++ AL  +Y K  EI SAR LFD 
Sbjct: 323 STLVSLV---PVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE 379

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
              K +  WNA+IS Y Q    + A  LF  M+ S+  PN VT+  +LS C + GAL +G
Sbjct: 380 SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG 439

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           KW+H  +     E  + + TAL+ MYAKCG +  A RLF     ++   WN M++GYG+H
Sbjct: 440 KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLH 499

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G G+EAL  F +M  SG+ P  +TF+ +L ACSHAGLV EG  +F+ M+H  G  P ++H
Sbjct: 500 GQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKH 559

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y CMVD+LGRAG L  A + I++M + P   VW  LL A ++HK+ ++    + ++ E++
Sbjct: 560 YACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELD 619

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           P N GY+VL+SNI++    +   A VR+  K+ ++ K PG++ +E+    H F  G
Sbjct: 620 PDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSG 675



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 133/287 (46%), Gaps = 2/287 (0%)

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           +++ T L    S  G + YA+ +F  + +  V  + V++ G+      +  + +FA + +
Sbjct: 52  ISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRK 111

Query: 269 E-NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
             ++ P+  T    I         + G+ +H   + +G +  L + + +V MY K   + 
Sbjct: 112 STDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVE 171

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLC 386
            AR +FD M  KD ++WN +IS Y +     ++ ++F  +   S  R +  T++ +L   
Sbjct: 172 DARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAV 231

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
            E   L +G  +H+   K G      + T  + +Y+KCG +     LF E    DI  +N
Sbjct: 232 AELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYN 291

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           AM+ GY  +G  E +L  F ++  SG +    T + L+    H  L+
Sbjct: 292 AMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 1/201 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N++++ Y +N     A++++  M+K+    +  TI  IL ACAQ+    LGK +H 
Sbjct: 385 LPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD 444

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
                  +   YVS ALI MY++CGS+  AR LFD M  ++ V+W+TMI GY   G  +E
Sbjct: 445 LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQE 504

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL +  EM    I P+ V  + ++   +    V  G  I   ++     E   V     +
Sbjct: 505 ALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEP-SVKHYACM 563

Query: 216 IDMYSKCGNLAYAKQLFNRLN 236
           +D+  + G+L  A Q    ++
Sbjct: 564 VDILGRAGHLQRALQFIEAMS 584



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 89/193 (46%), Gaps = 2/193 (1%)

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           HA I+ +GF   +++   L         I  AR +F  ++  DV ++N ++  ++     
Sbjct: 40  HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99

Query: 358 DKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
             +  +F H+ K + ++PN  T    +S  +       G+ +H      G + +++L + 
Sbjct: 100 HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSN 159

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM-ERSGVKP 475
           +V MY K   V  A ++F     +D  +WN M++GY  +    E++  F D+   S  + 
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219

Query: 476 NGITFIGLLNACS 488
           +  T + +L A +
Sbjct: 220 DTTTLLDILPAVA 232


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 222/649 (34%), Positives = 349/649 (53%), Gaps = 64/649 (9%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           +P   +N LV  +IK      A+ +   M + G++ D+FT+P  LKAC ++     G+ +
Sbjct: 112 SPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRAL 171

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR---DVVSWSTMIRGYHRG 150
           HG    NG + + +V NAL+ MYS CGSL  A  +FDE+  +   DV+SW++++  + +G
Sbjct: 172 HGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKG 231

Query: 151 GLPEEALEVMREMRFM------DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
             P  ALE+  EM  +      + R   +++++++   A +  +   K IH+  +RN   
Sbjct: 232 SNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRN--G 289

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
                 +  ALID Y+KCG++  A ++FN +    VVSW  M++GY +         LF 
Sbjct: 290 TFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFE 349

Query: 265 EMIEENVF-----------------------------------PSEITILSLIIECGFVG 289
            M +EN+                                    P+ +TI+SL+  C  +G
Sbjct: 350 NMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLG 409

Query: 290 GLQLGKWLHAYILRNGF------------EFSLAMANALVDMYGKCREIRSARTLFDGM- 336
            L  G  +HAY L+                  L + NAL+DMY KCR  ++AR++FD + 
Sbjct: 410 ALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIP 469

Query: 337 -KSKDVMIWNAVISAYAQAHCIDKAFELFIHM--KVSKVRPNEVTMVGLLSLCTEAGALE 393
            + ++V+ W  +I  YAQ    + A ++F  M  K   V PN  T+  +L  C    AL 
Sbjct: 470 RRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALR 529

Query: 394 MGKWLHTYIEKQG-LEVDV-ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           MGK +H Y+ +    E  V  +   L+DMY+KCGDV+ A  +F     R+   W +MM+G
Sbjct: 530 MGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSG 589

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           YGMHG G+EAL  F  M+++G  P+ I+F+ LL ACSH+G+V +G + FD M     +V 
Sbjct: 590 YGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVA 649

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
             EHY C++DLL R G LD+A + I+ MP+ P+ ++W ALL+A ++H N  + E A  ++
Sbjct: 650 SAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKL 709

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
           + ++ +N G   L+SNIYA A RW DVA +R++MK+  +KK PG S V+
Sbjct: 710 VNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQ 758



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/502 (28%), Positives = 260/502 (51%), Gaps = 68/502 (13%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFM------RKNGSEVDNFTIPTILKACAQVLM 86
           I+ +  +NS+V +++K + P +AL +++ M      +      D  +I  IL ACA +  
Sbjct: 215 IDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKA 274

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
               KEIH +AI+NG   DA+V NALI  Y++CGS+  A  +F+ M  +DVVSW+ M+ G
Sbjct: 275 LPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTG 334

Query: 147 YHRGG----------------LP-------------------EEALEVMREMRFMDIRPS 171
           Y + G                +P                   +EAL+  ++M      P+
Sbjct: 335 YTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPN 394

Query: 172 EVAMISMVSLFADVADVDLGKAIHACVVRNC----------KDEKLGVAIATALIDMYSK 221
            V +IS++S  A +  +  G  IHA  ++ C            +   + +  ALIDMYSK
Sbjct: 395 SVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSK 454

Query: 222 CGNLAYAKQLFNRL--NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN--VFPSEIT 277
           C +   A+ +F+ +   + +VV+WTVMI GY +  + N+ +++F+EMI +   V P+  T
Sbjct: 455 CRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYT 514

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLA-MANALVDMYGKCREIRSARTLFDG 335
           I  +++ C  +  L++GK +HAY+ R+  +E S+  +AN L+DMY KC ++ +AR +FD 
Sbjct: 515 ISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDS 574

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M  ++ + W +++S Y       +A ++F  M+ +   P++++ + LL  C+ +G ++ G
Sbjct: 575 MPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG 634

Query: 396 KWLHTYIEKQGLEVDVILK----TALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMA 450
                Y +    + DV+        ++D+ A+CG ++ A++   E  +     +W A+++
Sbjct: 635 L---NYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLS 691

Query: 451 GYGMHG---CGEEALIFFVDME 469
              +H      E AL   V+M+
Sbjct: 692 ACRVHSNVELAEYALNKLVNMK 713



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 143/574 (24%), Positives = 250/574 (43%), Gaps = 87/574 (15%)

Query: 66  GSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG---------------LDGDAYVS- 109
           G +V      ++LK C  V   +  ++IH   I  G               L   +YVS 
Sbjct: 26  GRDVSPTHFASLLKECRSV---NTVRQIHQKIIACGLLSYPSSLLSVPLAPLPSHSYVSP 82

Query: 110 ----NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
                 ++  Y  CG+   A  + + +     V W+ ++R + + G  + A+ V   M  
Sbjct: 83  KSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLR 142

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
              +P    +   +    ++     G+A+H  +   C   +  V +  AL+ MYS+CG+L
Sbjct: 143 AGTKPDHFTLPYALKACGELPSYCCGRALHGLIC--CNGFESNVFVCNALVAMYSRCGSL 200

Query: 226 AYAKQLFNRLNQ---NSVVSWTVMISGYIRCNEINEGVRLFAEM---IEE---NVFPSEI 276
             A  +F+ + +   + V+SW  +++ +++ +     + LF+EM   + E   N     I
Sbjct: 201 EDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDII 260

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           +I++++  C  +  L   K +H+Y +RNG      + NAL+D Y KC  +  A  +F+ M
Sbjct: 261 SIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVM 320

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV------------------------ 372
           + KDV+ WNA+++ Y Q+     AFELF +M+   +                        
Sbjct: 321 EFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEAL 380

Query: 373 -----------RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL------------EV 409
                       PN VT++ LLS C   GAL  G  +H Y  K+ L              
Sbjct: 381 DAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGE 440

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRD--ICMWNAMMAGYGMHGCGEEALIFFVD 467
           D+++  AL+DMY+KC     A  +F     R+  +  W  M+ GY  +G   +AL  F +
Sbjct: 441 DLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSE 500

Query: 468 M--ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG-CMVDLLG 524
           M  +   V PN  T   +L AC+H   +  GK +   +       P +     C++D+  
Sbjct: 501 MISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYS 560

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           + G +D A  +  SMP R N + W ++++   +H
Sbjct: 561 KCGDVDTARNVFDSMPKR-NEVSWTSMMSGYGMH 593



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/340 (30%), Positives = 178/340 (52%), Gaps = 22/340 (6%)

Query: 31  NIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           NI   +  +++++  Y +      AL+ +  M  +GSE ++ TI ++L ACA +     G
Sbjct: 355 NIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQG 414

Query: 91  KEIHGFAIKNGL------------DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD-- 136
            EIH +++K  L              D  V NALI MYS+C S  +AR +FD +P R+  
Sbjct: 415 MEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERN 474

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREM--RFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           VV+W+ MI GY + G   +AL++  EM  +   + P+   +  ++   A +A + +GK I
Sbjct: 475 VVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQI 534

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
           HA V R+ + E     +A  LIDMYSKCG++  A+ +F+ + + + VSWT M+SGY    
Sbjct: 535 HAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHG 594

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY-ILRNGFEF--SLA 311
              E + +F +M +    P +I+ L L+  C   G +  G  L+ + I+R  ++   S  
Sbjct: 595 RGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQG--LNYFDIMRRDYDVVASAE 652

Query: 312 MANALVDMYGKCREIRSA-RTLFDGMKSKDVMIWNAVISA 350
               ++D+  +C  +  A +T+ +       +IW A++SA
Sbjct: 653 HYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSA 692


>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
           sativa Japonica Group]
 gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 702

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 205/600 (34%), Positives = 333/600 (55%), Gaps = 7/600 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + S+++ Y +N +P +AL ++A M ++G   ++F     L ACA +     G+++H  A+
Sbjct: 82  WTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAV 141

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G  GDA++ + LI+MYS CGSL +A+ +FD M + DVV ++++I  + R G  E A E
Sbjct: 142 RAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAE 201

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
            + +M    ++P+E  M ++++    V    LG+ IH  +++        V  +TALID 
Sbjct: 202 ALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDF 257

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YS+ G    AK +F+ L+  +VVSW  M+  YIR   + E +++F +MI E V P+E  +
Sbjct: 258 YSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFAL 317

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
             ++  CG +G   LG+ LH   +++     + ++NAL+ MYG+   +     + + +++
Sbjct: 318 SIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIEN 374

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D++ W   ISA  Q    +KA  L   M      PN      +LS C +  +L+ G   
Sbjct: 375 PDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQF 434

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    K G + ++    AL++MY+KCG +  A   F      D+  WN+++ G+  HG  
Sbjct: 435 HCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDA 494

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            +AL  F  M  +G+KP+  TF+G+L  C+H+G+V EG+  F  M+      P   HY C
Sbjct: 495 NKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYAC 554

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           M+D+LGR G  DEA  MI  MP  P+ ++W  LLA+ KLH+N  +G++AA +++E+  ++
Sbjct: 555 MIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRD 614

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
               VLMSNIYA+   W D   VRR M E  VKK+ G S +E+N  VH F    M +  S
Sbjct: 615 SASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNS 674



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 224/447 (50%), Gaps = 21/447 (4%)

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV 179
           G L  A  LFD MP ++VV+W++++ GY R G PE AL +  +M    + P++ A  + +
Sbjct: 62  GRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAAL 121

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRL 235
              AD+  +  G+ +H+  VR       G A    I + LI+MYS+CG+L  AK++F+R+
Sbjct: 122 VACADLGALRAGEQVHSLAVR------AGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRM 175

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
           +   VV +T +IS + R  E         +M+++ + P+E T+ +++  C  V    LG+
Sbjct: 176 DSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQ 231

Query: 296 WLHAYILRN-GFEF-SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
            +H Y+++  G    S+  + AL+D Y +  E + A+ +FD +  K+V+ W +++  Y +
Sbjct: 232 QIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIR 291

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
              +++A ++F  M    V PNE  +  +L  C   G++ +G+ LH    K  L  D+ +
Sbjct: 292 DGRLEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRV 348

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
             AL+ MY + G V     + ++    D+  W   ++    +G GE+A+     M   G 
Sbjct: 349 SNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGF 408

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
            PNG  F  +L++C+    + +G   F  +   LG   +I     ++++  + G +  A 
Sbjct: 409 TPNGYAFSSVLSSCADVASLDQGMQ-FHCLALKLGCDSEICTGNALINMYSKCGQMGSAR 467

Query: 534 EMIKSMPLRPNMIVWGALLAASKLHKN 560
                M    ++  W +L+     H +
Sbjct: 468 LAFDVMHTH-DVTSWNSLIHGHAQHGD 493



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 200/396 (50%), Gaps = 19/396 (4%)

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
           E   V +    ++   K G LA A  LF+R+ + +VV+WT ++SGY R       + +FA
Sbjct: 44  ESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFA 103

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           +M+E  V P++    + ++ C  +G L+ G+ +H+  +R GF     + + L++MY +C 
Sbjct: 104 DMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCG 163

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            + +A+ +FD M S DV+ + ++ISA+ +    + A E  I M    ++PNE TM  +L+
Sbjct: 164 SLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILT 223

Query: 385 LCTEAGALEMGKWLHTY-IEKQGLEVD-VILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
            C       +G+ +H Y I+K GL    V   TAL+D Y++ G+   A  +F     +++
Sbjct: 224 ACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNV 279

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             W +MM  Y   G  EEAL  F DM   GV PN      +L AC   GL   G+ +   
Sbjct: 280 VSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL---GRQLHCS 336

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
            +    L+  I     ++ + GR GL++E   M+  +   P+++ W   ++A+  +    
Sbjct: 337 AIKH-DLITDIRVSNALLSMYGRTGLVEELEAMLNKIE-NPDLVSWTTAISANFQN---G 391

Query: 563 MGEIAATQILEIE-----PQNYGYNVLMSNIYAVAN 593
            GE A   + ++      P  Y ++ ++S+   VA+
Sbjct: 392 FGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVAS 427



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 1/149 (0%)

Query: 32  IINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           I NP L  + + +++  +N     A+ +   M   G   + +   ++L +CA V     G
Sbjct: 372 IENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQG 431

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
            + H  A+K G D +    NALI MYS+CG + SAR  FD M   DV SW+++I G+ + 
Sbjct: 432 MQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQH 491

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMV 179
           G   +ALEV  +MR   I+P +   + ++
Sbjct: 492 GDANKALEVFSKMRSNGIKPDDSTFLGVL 520


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 205/599 (34%), Positives = 347/599 (57%), Gaps = 3/599 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  +NSL++ Y  +     AL IY  +R +    D+FT+ ++L A A +L+   G+ 
Sbjct: 169 VRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQG 228

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HGF +K+G++  + V+N L+ MY +      AR +FDEM  RD V+++TMI GY +  +
Sbjct: 229 LHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEM 288

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            EE++++  E      +P  + + S++     + D+ L K I+  ++R      L   + 
Sbjct: 289 VEESVKMFLE-NLDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLR--AGFVLESTVK 345

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
             LID+Y+KCG++  A+ +FN +     VSW  +ISGYI+  ++ E ++LF  M+     
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
              IT L LI     +  L+ GK LH+  +++G    L+++NAL+DMY KC E+  +  +
Sbjct: 406 ADHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKI 465

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ M + D + WN VISA  +        ++   M+ +KV P+  T +  L +C    A 
Sbjct: 466 FNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAK 525

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
            +GK +H  + + G E ++ +  AL++MY+KCG +  ++R+F     RD+  W  M+  Y
Sbjct: 526 RLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAY 585

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
           GM+G GE+AL  FVDME+SG+ P+ + FI L+ ACSH+GLV +G + F+KM     + P 
Sbjct: 586 GMYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPM 645

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           IEHY C+VDLL R+  + +A E I++MP+ P+  +W ++L A +   +    E  + +I+
Sbjct: 646 IEHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRII 705

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           E+ P + GY++L SN YA   +W+ V+ +R+ +++  +KK PG+S +E+   VH F  G
Sbjct: 706 ELNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSG 764



 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 169/596 (28%), Positives = 310/596 (52%), Gaps = 41/596 (6%)

Query: 9   NLEQTRQCHAHIIK-----------------THFKFSYTNI-----INPLTR---YNSLV 43
           NL + R+ HA +I                  +HF+   +++     ++P      +NS++
Sbjct: 19  NLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSII 78

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD 103
            ++ KN     AL  Y  +R++    D +T P+++KACA +    +G  ++   ++ G +
Sbjct: 79  RAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGFE 138

Query: 104 GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
            D YV NAL+ MYS  G L  AR +FDEMP RD+VSW+++I GY   G  EEALE+  E+
Sbjct: 139 SDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198

Query: 164 RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV----AIATALIDMY 219
           R   I P    + S++  FA++  V  G+ +H   +++      GV     +   L+ MY
Sbjct: 199 RNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFTLKS------GVNSVSVVNNGLLAMY 252

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            K      A+++F+ +     V++  MI GY++   + E V++F E +++   P  +T+ 
Sbjct: 253 LKFSRPTDARRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLENLDQ-FKPDILTVT 311

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           S++  CG +  L L K+++ Y+LR GF     + N L+D+Y KC ++ +AR +F+ M+ K
Sbjct: 312 SVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECK 371

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           D + WN++IS Y Q+  + +A +LF  M + + + + +T + L+SL T    L+ GK LH
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLSTRLADLKFGKGLH 431

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
           +   K G+ +D+ +  AL+DMYAKCG+V  + ++F+     D   WN +++     G   
Sbjct: 432 SNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFA 491

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
             L     M ++ V P+  TF+  L  C+       GK +   ++   G   +++    +
Sbjct: 492 TGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNAL 550

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           +++  + G L+ +  + + M  R +++ W  ++ A  ++     GE A    +++E
Sbjct: 551 IEMYSKCGCLESSFRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALESFVDME 602


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 226/644 (35%), Positives = 346/644 (53%), Gaps = 53/644 (8%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+   +        L +Y  M++ G   D++T P +LKAC ++     G  +H    
Sbjct: 113 WNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVF 172

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR---DVVSWSTMIRGYHRGGLPEE 155
            +G + + +V N L+ MY  CG+  +AR +FDEM  R   D+VSW++++  Y +GG    
Sbjct: 173 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 232

Query: 156 ALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           A+++   M   + IRP  V++++++   A V     GK +H   +R+   E   V +  A
Sbjct: 233 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFED--VFVGNA 290

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE----- 269
           ++DMY+KCG +  A ++F R+    VVSW  M++GY +    ++ + LF ++ EE     
Sbjct: 291 VVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELN 350

Query: 270 ---------------------NVF---------PSEITILSLIIECGFVGGLQLGKWLHA 299
                                +VF         P+ +T++SL+  C   G L  GK  H 
Sbjct: 351 VVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHC 410

Query: 300 YILR-------NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD--VMIWNAVISA 350
           + ++       N     L + NAL+DMY KC+  ++AR +FD +  KD  V+ W  +I  
Sbjct: 411 HAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGG 470

Query: 351 YAQAHCIDKAFELFIHMKVSK--VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
            AQ    ++A ELF  M      V PN  T+   L  C   GAL  G+ +H Y+ +   E
Sbjct: 471 NAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFE 530

Query: 409 VDVI-LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
             ++ +   L+DMY+K GDV+ A  +F     R+   W ++M GYGMHG GEEAL  F +
Sbjct: 531 SAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYE 590

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           M++  + P+G+TF+ +L ACSH+G+V +G + F+ M    G+VP  EHY CMVDLL RAG
Sbjct: 591 MQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAG 650

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSN 587
            LDEA E+I+ MP++P   VW ALL+A +++ N  +GE AA Q+LE+E  N G   L+SN
Sbjct: 651 RLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYTLLSN 710

Query: 588 IYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           IYA A  W DVA +R +MK   +KK PG S V+       F  G
Sbjct: 711 IYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAG 754



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 233/448 (52%), Gaps = 47/448 (10%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKN-GSEVDNFTIPTILKACAQVLMTHLGK 91
           +  L  +NS+V +Y++      A+ ++  M ++ G   D  ++  +L ACA V     GK
Sbjct: 211 VGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGK 270

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTM-------- 143
           ++HG+A+++GL  D +V NA++ MY++CG +  A  +F+ M  +DVVSW+ M        
Sbjct: 271 QVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIG 330

Query: 144 ---------------------------IRGYHRGGLPEEALEVMREMRFMDIRPSEVAMI 176
                                      I GY + GL  EAL+V R+M      P+ V ++
Sbjct: 331 RFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLV 390

Query: 177 SMVSLFADVADVDLGKAIHACVVR-----NCKDEKLGVAIATALIDMYSKCGNLAYAKQL 231
           S++S  A    +  GK  H   ++     +  D    + +  ALIDMYSKC +   A+ +
Sbjct: 391 SLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAM 450

Query: 232 FNRL--NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN--VFPSEITILSLIIECGF 287
           F+ +     SVV+WTV+I G  +  E NE + LF++M++ +  V P+  TI   ++ C  
Sbjct: 451 FDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACAR 510

Query: 288 VGGLQLGKWLHAYILRNGFEFS-LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
           +G L+ G+ +HAY+LRN FE + L +AN L+DMY K  ++ +AR +FD M  ++ + W +
Sbjct: 511 LGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTS 570

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQ 405
           +++ Y      ++A ++F  M+   + P+ VT V +L  C+ +G ++ G  + +   +  
Sbjct: 571 LMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDF 630

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRL 433
           G+         +VD+ ++ G ++ A  L
Sbjct: 631 GVVPGAEHYACMVDLLSRAGRLDEAMEL 658



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 195/431 (45%), Gaps = 60/431 (13%)

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNS--VVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           T +I MY    + A A  +  RL+ +S  V  W  +I   +    + + ++L+  M    
Sbjct: 81  THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLG 140

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
             P   T   ++  CG +   + G  +HA +  +GFE+++ + N LV MYG+C    +AR
Sbjct: 141 WRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENAR 200

Query: 331 TLFDGMKSK---DVMIWNAVISAYAQAHCIDKAFELFIHMKVS-KVRPNEVTMVGLLSLC 386
            +FD M+ +   D++ WN++++AY Q     +A ++F  M     +RP+ V++V +L  C
Sbjct: 201 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 260

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
              GA   GK +H Y  + GL  DV +  A+VDMYAKCG +  A ++F     +D+  WN
Sbjct: 261 ASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWN 320

Query: 447 AM-----------------------------------MAGYGMHGCGEEALIFFVDMERS 471
           AM                                   +AGY   G G EAL  F  M   
Sbjct: 321 AMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLC 380

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD- 530
           G +PN +T + LL+ C+ AG +  GK   +   H +  +  ++      DL+    L+D 
Sbjct: 381 GSEPNVVTLVSLLSGCASAGTLLHGK---ETHCHAIKWILNLDENDPGDDLMVINALIDM 437

Query: 531 --------EAHEMIKSMPLRPNMIV-WGALLAASKLHKNPSMGEIAATQILEIEPQNYGY 581
                    A  M   +P +   +V W  L+  +  H   +      +Q+L  +P N+  
Sbjct: 438 YSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQML--QPDNF-- 493

Query: 582 NVLMSNIYAVA 592
             +M N + ++
Sbjct: 494 --VMPNAFTIS 502


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  395 bits (1016), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 206/590 (34%), Positives = 331/590 (56%), Gaps = 2/590 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+  Y ++NK   A  ++A +   G E++ F   T+LK    +    LG+ +HG  +
Sbjct: 14  FVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAELGRIVHGCVL 73

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   + ++  ALI  YS  G +  AR +FDE+ ++D+VSW+ MI  Y       EALE
Sbjct: 74  KVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIASYAENDCFSEALE 133

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
              +MR    +P+      ++     + + D GK +H  V++   +  L V +   L+++
Sbjct: 134 FFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVG--LLEL 191

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y++CG+   A + F  + +N V+ W+ MIS + +  +  + + +F +M    V P++ T 
Sbjct: 192 YTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTF 251

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++     +  L L K +H + L+ G    + ++NAL+  Y KC  I  +  LF+ +  
Sbjct: 252 SSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSD 311

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           ++ + WN +I +Y Q    ++A  LF +M   +V+  EVT   +L  C    ALE+G  +
Sbjct: 312 RNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQV 371

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    K     DV +  AL+DMYAKCG +  A  +F     RD   WNA++ GY MHG G
Sbjct: 372 HCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLG 431

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EA+  F  M+ +  KP+ +TF+G+L+ACS+ G + EGK  F  M    G+ P +EHY C
Sbjct: 432 VEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTC 491

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MV L+GR+G LD+A + I+ +P  P++++W ALL A  +H +  +G I+A ++LE+EP++
Sbjct: 492 MVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRISAQRVLELEPRD 551

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
              +VL+SNIYA A RW +VA VR+ MK   VKKEPG S +E  G VH F
Sbjct: 552 EASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHCF 601



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 226/422 (53%), Gaps = 4/422 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +  ++ SY +N+  S AL  ++ MR  G + +NFT   +LKAC  +     GK +H 
Sbjct: 112 MVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHC 171

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K   + D YV   L+++Y+ CG    A   F +MP  DV+ WS MI  + + G  E+
Sbjct: 172 SVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEK 231

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           ALE+  +MR   + P++    S++   AD+  +DL K IH   ++        V ++ AL
Sbjct: 232 ALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALK--AGLSTDVFVSNAL 289

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +  Y+KCG +  + +LF  L+  + VSW  +I  Y++  +    + LF+ M+   V  +E
Sbjct: 290 MACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATE 349

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T  S++  C  +  L+LG  +H    +  +   +A+ NAL+DMY KC  I+ AR +FD 
Sbjct: 350 VTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDM 409

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +  +D + WNA+I  Y+      +A ++F  MK +K +P+E+T VG+LS C+  G L+ G
Sbjct: 410 LDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEG 469

Query: 396 KWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYG 453
           K   T +++  G+E  +   T +V +  + G+++ A +   +  +   + +W A++    
Sbjct: 470 KQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACV 529

Query: 454 MH 455
           +H
Sbjct: 530 IH 531



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 215/438 (49%), Gaps = 18/438 (4%)

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           +FDEMP R+ VS+ T+I GY +     EA E+   +       +     +++ L   +  
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 188 VDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSW 243
            +LG+ +H CV+      K+G      I TALID YS  G ++ A+++F+ ++   +VSW
Sbjct: 62  AELGRIVHGCVL------KVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSW 115

Query: 244 TVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
           T MI+ Y   +  +E +  F++M      P+  T   ++  C  +     GK +H  +L+
Sbjct: 116 TGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLK 175

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
             +E  L +   L+++Y +C +   A   F  M   DV+ W+ +IS +AQ+   +KA E+
Sbjct: 176 TNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEI 235

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F  M+ + V PN+ T   +L    +  +L++ K +H +  K GL  DV +  AL+  YAK
Sbjct: 236 FCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAK 295

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
           CG +  +  LF     R+   WN ++  Y   G GE AL  F +M R  V+   +T+  +
Sbjct: 296 CGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSI 355

Query: 484 LNACSHAGLVTEGKSVF---DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
           L AC+    +  G  V     K ++G      +     ++D+  + G + +A  M   + 
Sbjct: 356 LRACATLAALELGLQVHCLTAKTIYG----QDVAVGNALIDMYAKCGSIKDARFMFDMLD 411

Query: 541 LRPNMIVWGALLAASKLH 558
           LR + + W A++    +H
Sbjct: 412 LR-DKVSWNAIICGYSMH 428



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 165/319 (51%), Gaps = 4/319 (1%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           N +  ++ +++ + ++ +   AL I+  MR+     + FT  ++L+A A +    L K I
Sbjct: 211 NDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTI 270

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG A+K GL  D +VSNAL+  Y++CG +  +  LF+ + +R+ VSW+T+I  Y + G  
Sbjct: 271 HGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDG 330

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           E AL +   M    ++ +EV   S++   A +A ++LG  +H    +    +   VA+  
Sbjct: 331 ERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQD--VAVGN 388

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALIDMY+KCG++  A+ +F+ L+    VSW  +I GY       E +++F  M E    P
Sbjct: 389 ALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKP 448

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTL 332
            E+T + ++  C   G L  GK     + ++ G E  +     +V + G+   +  A   
Sbjct: 449 DELTFVGVLSACSNTGRLDEGKQYFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKF 508

Query: 333 FDGMK-SKDVMIWNAVISA 350
            + +     VMIW A++ A
Sbjct: 509 IEDIPFEPSVMIWRALLGA 527


>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1221

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 203/590 (34%), Positives = 330/590 (55%), Gaps = 7/590 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + S+++ Y +N +P +AL ++A M ++G   ++F     L ACA +     G+++H  A+
Sbjct: 9   WTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAV 68

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G  GDA++ + LI+MYS CGSL +A+ +FD M + DVV ++++I  + R G  E A E
Sbjct: 69  RAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAE 128

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
            + +M    ++P+E  M ++++    V    LG+ IH  +++        V  +TALID 
Sbjct: 129 ALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDF 184

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YS+ G    AK +F+ L+  +VVSW  M+  YIR   + E +++F +MI E V P+E  +
Sbjct: 185 YSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFAL 244

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
             ++  CG +G   LG+ LH   +++     + ++NAL+ MYG+   +     + + +++
Sbjct: 245 SIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIEN 301

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D++ W   ISA  Q    +KA  L   M      PN      +LS C +  +L+ G   
Sbjct: 302 PDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQF 361

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    K G + ++    AL++MY+KCG +  A   F      D+  WN+++ G+  HG  
Sbjct: 362 HCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDA 421

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            +AL  F  M  +G+KP+  TF+G+L  C+H+G+V EG+  F  M+      P   HY C
Sbjct: 422 NKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYAC 481

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           M+D+LGR G  DEA  MI  MP  P+ ++W  LLA+ KLH+N  +G++AA +++E+  ++
Sbjct: 482 MIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRD 541

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
               VLMSNIYA+   W D   VRR M E  VKK+ G S +E+N  VH F
Sbjct: 542 SASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTF 591



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 218/435 (50%), Gaps = 21/435 (4%)

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           MP ++VV+W++++ GY R G PE AL +  +M    + P++ A  + +   AD+  +  G
Sbjct: 1   MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60

Query: 192 KAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           + +H+  VR       G A    I + LI+MYS+CG+L  AK++F+R++   VV +T +I
Sbjct: 61  EQVHSLAVR------AGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLI 114

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GF 306
           S + R  E         +M+++ + P+E T+ +++  C  V    LG+ +H Y+++  G 
Sbjct: 115 SAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGL 170

Query: 307 EF-SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
              S+  + AL+D Y +  E + A+ +FD +  K+V+ W +++  Y +   +++A ++F 
Sbjct: 171 RSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFG 230

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            M    V PNE  +  +L  C   G++ +G+ LH    K  L  D+ +  AL+ MY + G
Sbjct: 231 DMISEGVDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTG 287

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
            V     + ++    D+  W   ++    +G GE+A+     M   G  PNG  F  +L+
Sbjct: 288 LVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLS 347

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
           +C+    + +G   F  +   LG   +I     ++++  + G +  A      M    ++
Sbjct: 348 SCADVASLDQGMQ-FHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTH-DV 405

Query: 546 IVWGALLAASKLHKN 560
             W +L+     H +
Sbjct: 406 TSWNSLIHGHAQHGD 420



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 186/366 (50%), Gaps = 19/366 (5%)

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           + + +VV+WT ++SGY R       + +FA+M+E  V P++    + ++ C  +G L+ G
Sbjct: 1   MPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAG 60

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
           + +H+  +R GF     + + L++MY +C  + +A+ +FD M S DV+ + ++ISA+ + 
Sbjct: 61  EQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRN 120

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY-IEKQGLEVD-VI 412
              + A E  I M    ++PNE TM  +L+ C       +G+ +H Y I+K GL    V 
Sbjct: 121 GEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVY 176

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
             TAL+D Y++ G+   A  +F     +++  W +MM  Y   G  EEAL  F DM   G
Sbjct: 177 SSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEG 236

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
           V PN      +L AC   GL   G+ +    +    L+  I     ++ + GR GL++E 
Sbjct: 237 VDPNEFALSIVLGACGSIGL---GRQLHCSAIKH-DLITDIRVSNALLSMYGRTGLVEEL 292

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE-----PQNYGYNVLMSN 587
             M+  +   P+++ W   ++A+  +     GE A   + ++      P  Y ++ ++S+
Sbjct: 293 EAMLNKIE-NPDLVSWTTAISANFQN---GFGEKAIALLCQMHSEGFTPNGYAFSSVLSS 348

Query: 588 IYAVAN 593
              VA+
Sbjct: 349 CADVAS 354



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 1/149 (0%)

Query: 32  IINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           I NP L  + + +++  +N     A+ +   M   G   + +   ++L +CA V     G
Sbjct: 299 IENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQG 358

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
            + H  A+K G D +    NALI MYS+CG + SAR  FD M   DV SW+++I G+ + 
Sbjct: 359 MQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQH 418

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMV 179
           G   +ALEV  +MR   I+P +   + ++
Sbjct: 419 GDANKALEVFSKMRSNGIKPDDSTFLGVL 447


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 206/595 (34%), Positives = 343/595 (57%), Gaps = 8/595 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + ++++  +K  +   +L ++  + +     D + + T+L AC+ +     GK+IH   +
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL 276

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G + DA + N LI  Y +CG + +A  LFD MPN++++SW+T++ GY +  L +EA+E
Sbjct: 277 RYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAME 336

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALID 217
           +   M    ++P   A  S+++  A +  ++ G  +HA  ++ N  ++     +  +LID
Sbjct: 337 LFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSY---VTNSLID 393

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN---EINEGVRLFAEMIEENVFPS 274
           MY+KC  L  A+++F+    + VV +  MI GY R     E+++ + +F +M    + PS
Sbjct: 394 MYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPS 453

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            +T +SL+     +  L L K +H  + + G    +   +AL+ +Y  C  ++ +R +FD
Sbjct: 454 LLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFD 513

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            MK KD++IWN++ S Y Q    ++A  LF+ +++S+ RP+E T V +++      +L++
Sbjct: 514 EMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQL 573

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G+  H  + K+GLE +  +  AL+DMYAKCG    A++ F  A  RD+  WN++++ Y  
Sbjct: 574 GQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYAN 633

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           HG G +AL     M   G++PN ITF+G+L+ACSHAGLV +G   F+ M+   G+ P+ E
Sbjct: 634 HGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETE 692

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HY CMV LLGRAG L+EA E+I+ MP +P  IVW +LL+      N  + E AA   +  
Sbjct: 693 HYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILS 752

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +P++ G   L+SNIYA    W D   VR  MK   V KEPG S +E+N  VH F+
Sbjct: 753 DPKDSGSFTLLSNIYASKGMWTDAKKVRERMKFEGVVKEPGRSWIEINKEVHIFL 807



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 161/508 (31%), Positives = 266/508 (52%), Gaps = 23/508 (4%)

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
           L+A    L+ H    +HG  I +GL+ D Y+SN L+ +YS  G +V AR +F++MP R++
Sbjct: 53  LRALDDPLLYH--NVVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNL 110

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFA--DVADVDLGKAI 194
           V+WSTM+   +  G  EE+L V  +  R     P+E  + S +   +  D +   +   +
Sbjct: 111 VTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQL 170

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
            + +V++  D    V + T LID Y K GN+ YA+ +F+ L + S V+WT MISG ++  
Sbjct: 171 QSFLVKSRFDRD--VYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
                ++LF +++E NV P    + +++  C  +  L+ GK +HA+ILR G E   ++ N
Sbjct: 229 RSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMN 288

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
            L+D Y KC  +R+A  LFDGM +K+++ W  ++S Y Q     +A ELF  M    ++P
Sbjct: 289 VLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKP 348

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           +      +L+ C    ALE G  +H Y  K  L  D  +  +L+DMYAKC  +  A ++F
Sbjct: 349 DMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVF 408

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEE---ALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
                 D+ ++NAM+ GY   G   E   AL  F DM    ++P+ +TF+ LL A   A 
Sbjct: 409 DIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRAS--AS 466

Query: 492 LVTEGKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           L + G S   K +HGL    GL   I     ++ +      L ++  +   M ++ ++++
Sbjct: 467 LTSLGLS---KQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVK-DLVI 522

Query: 548 WGALLAASKLHKNPSMGEIAATQILEIE 575
           W ++ +    +   S  E A    LE++
Sbjct: 523 WNSMFSG---YVQQSENEEALNLFLELQ 547



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 113/222 (50%), Gaps = 11/222 (4%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  +NS+ + Y++ ++   ALN++  ++ +    D FT   ++ A   +    LG+E
Sbjct: 517 VKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQE 576

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
            H   +K GL+ + Y++NAL+ MY++CGS   A   FD   +RDVV W+++I  Y   G 
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
             +AL+++ +M    I P+ +  + ++S  +    V+ G      ++R       G+   
Sbjct: 637 GRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR------FGIEPE 690

Query: 213 T----ALIDMYSKCGNLAYAKQLFNRL-NQNSVVSWTVMISG 249
           T     ++ +  + G L  A++L  ++  + + + W  ++SG
Sbjct: 691 TEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSG 732


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 210/629 (33%), Positives = 345/629 (54%), Gaps = 41/629 (6%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++ +Y +N   + AL +Y  M   G   D+ T  ++L AC+ +     G+EIH    
Sbjct: 78  WNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSLAQ---GREIHNRVF 134

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +GLD    ++NAL+ MY+  GS+  A+ +F  +  RD  SW+ +I  + + G    AL 
Sbjct: 135 YSGLDSFQSLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALR 194

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + +EM+  D++P+    I+++S F+    +  G+ IHA +V N  D  L   +ATALI+M
Sbjct: 195 IFKEMK-CDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDL--VVATALINM 251

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCG+   A+++F+++ +  +VSW VMI  Y+   + +E + L+ ++  E    ++ T 
Sbjct: 252 YGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATF 311

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC--------------- 323
           +S++  C  V  L  G+ +H++IL  G +  +A+A ALV+MY KC               
Sbjct: 312 VSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKN 371

Query: 324 -------------------REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
                              ++ R AR +FD + S+D + WNA+I+ Y Q  C   A ++F
Sbjct: 372 RDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIF 431

Query: 365 IHMK-VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
             M   + ++P+ VT + +L  C   G L   K LH  I +  LE +V++   L++MYA+
Sbjct: 432 REMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYAR 491

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
           CG +  A RLF+ A  + +  W AM+A +  +G   EAL  F +M+  GVKP+ +T+  +
Sbjct: 492 CGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSI 551

Query: 484 LNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           L  C+H G + +G   F  M     L P  +H+  MVDLLGR+G L +A E+++SMP  P
Sbjct: 552 LFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEP 611

Query: 544 NMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRR 603
           + + W   L A ++H    +GE AA ++ E++P +    + MSNIYA    W  VA VR+
Sbjct: 612 DPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRK 671

Query: 604 VMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
            M+E  +KK PG S +EV+G +H+F  GG
Sbjct: 672 KMEERGLKKLPGLSFIEVDGKLHEFSSGG 700



 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 156/524 (29%), Positives = 262/524 (50%), Gaps = 45/524 (8%)

Query: 68  EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY 127
           + DN T  T+L +C+       G+ +H     +  + D  V NALI MY +C SLV AR 
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 128 LFDEMP--NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV 185
           +F+ M    R+VVSW+ MI  Y + G   EAL +   M    +    V  +S++   + +
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123

Query: 186 ADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           A    G+ IH  V  +  D     ++A AL+ MY++ G++  AK++F  L      SW  
Sbjct: 124 AQ---GREIHNRVFYSGLDSFQ--SLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNA 178

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
           +I  + +  + +  +R+F EM + +V P+  T +++I        L  G+ +HA I+ NG
Sbjct: 179 VILAHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANG 237

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
           F+  L +A AL++MYGKC     AR +FD MK +D++ WN +I  Y       +A EL+ 
Sbjct: 238 FDTDLVVATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQ 297

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            + +   +  + T V +L  C+   AL  G+ +H++I ++GL+ +V + TALV+MYAKCG
Sbjct: 298 KLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNMYAKCG 357

Query: 426 ----------------------------------DVNGAYRLFSEAIYRDICMWNAMMAG 451
                                             D   A ++F     RD   WNAM+  
Sbjct: 358 SLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMITT 417

Query: 452 YGMHGCGEEALIFFVDME-RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           Y  +GC   A+  F +M   +G+KP+ +TFI +L AC+  G ++E K++  ++     L 
Sbjct: 418 YVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISES-ELE 476

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
             +     ++++  R G L+EA  +  +   +  ++ W A++AA
Sbjct: 477 SNVVVTNTLINMYARCGSLEEAERLFAAAKEK-TVVSWTAMVAA 519



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 166/352 (47%), Gaps = 39/352 (11%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N ++  Y+ N     AL +Y  +   G +    T  +IL AC+ V     G+ +H 
Sbjct: 273 MVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHS 332

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             ++ GLD +  V+ AL+ MY++CGSL  AR +F+ M NRD V+WST+I  Y   G  ++
Sbjct: 333 HILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKD 392

Query: 156 ----------------------------------ALEVMREMR-FMDIRPSEVAMISMVS 180
                                             A+++ REM     ++P  V  I+++ 
Sbjct: 393 ARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLE 452

Query: 181 LFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
             A +  +   KA+HA +  +  + +  V +   LI+MY++CG+L  A++LF    + +V
Sbjct: 453 ACASLGRLSEVKALHAQISES--ELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTV 510

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG-KWLHA 299
           VSWT M++ + +     E + LF EM  E V P ++T  S++  C   G L+ G ++   
Sbjct: 511 VSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTD 570

Query: 300 YILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
               +    +     A+VD+ G+   +  A+ L + M    D + W   ++A
Sbjct: 571 MAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTA 622


>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 666

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 220/614 (35%), Positives = 346/614 (56%), Gaps = 9/614 (1%)

Query: 15  QCHAHIIKTHFKFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNF 72
           QCH     +H    +  +  P L  +N+++  Y++  +P  ALN++  M  +G  + D F
Sbjct: 58  QCHHASYASHL---FDKLSQPCLFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKF 114

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           T P ++KAC  + +  +G  IHG   K G D D +V N L+ MY   G   +A+ +FD M
Sbjct: 115 TYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKEAAQLVFDPM 174

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
             R V+SW+TMI GY R    E+A+ V   M  + + P    ++S++     + +V+LG+
Sbjct: 175 QERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEPDCATVVSVLPACGLLKNVELGR 234

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
            +H  V    K     + +  AL+DMY KCG +  A  L   ++   VV+WT +I+GYI 
Sbjct: 235 EVHTLVQE--KGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYIL 292

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
             +    + L   M  E V P+ ++I SL+  CG +  L  GK LHA+ +R   E  + +
Sbjct: 293 NGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIV 352

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
             AL++MY KC     +  +F G   K    WNA++S + Q     +A ELF  M V  V
Sbjct: 353 ETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSGFIQNRLAREAIELFKQMLVKDV 412

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR 432
           +P+  T   LL        L+    +H Y+ + G    + + + LVD+Y+KCG +  A++
Sbjct: 413 QPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQ 472

Query: 433 LFS--EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
           +F+      +DI +W+A++A YG HG G+ A+  F  M +SGVKPN +TF  +L+ACSHA
Sbjct: 473 IFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHA 532

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           GLV EG S+F+ M+    ++  ++HY CM+DLLGRAG L++A+ +I++MP+ PN  VWGA
Sbjct: 533 GLVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRAGRLNDAYNLIRTMPITPNHAVWGA 592

Query: 551 LLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRV 610
           LL A  +H+N  +GE+AA    ++EP+N G  VL++ +YA   RW D   VR ++ E+ +
Sbjct: 593 LLGACVIHENVELGEVAARWTFKLEPENTGNYVLLAKLYAAVGRWGDAERVRDMVNEVGL 652

Query: 611 KKEPGFSSVEVNGL 624
           +K P  S +EV  +
Sbjct: 653 RKLPAHSLIEVRDM 666



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 230/453 (50%), Gaps = 4/453 (0%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           K +H   +  G+   + + + L   Y++C     A +LFD++    + SW+ M+R Y + 
Sbjct: 31  KRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYVQI 90

Query: 151 GLPEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
           G P +AL +  EM       P +     ++    D++ +D+G  IH    +   D     
Sbjct: 91  GRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSD--T 148

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            +   L+ MY   G    A+ +F+ + + +V+SW  MI+GY R N   + V ++  M++ 
Sbjct: 149 FVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDV 208

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            V P   T++S++  CG +  ++LG+ +H  +   GF  ++ + NALVDMY KC +++ A
Sbjct: 209 GVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEA 268

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             L  GM  KDV+ W  +I+ Y        A  L   M+   V+PN V++  LLS C   
Sbjct: 269 WLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSL 328

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
             L  GK LH +  +Q +E +VI++TAL++MYAKC   N +Y++F     +    WNA++
Sbjct: 329 VYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALL 388

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           +G+  +    EA+  F  M    V+P+  TF  LL A +    + +  ++   ++   G 
Sbjct: 389 SGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRS-GF 447

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
           + ++E    +VD+  + G L  AH++   + L+
Sbjct: 448 LYRLEVASILVDIYSKCGSLGYAHQIFNIISLK 480


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 207/616 (33%), Positives = 351/616 (56%), Gaps = 17/616 (2%)

Query: 25  FKFSYTNIINPLTRYNSLV--TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACA 82
           F+F  + +    T Y+S +  T++  NNK     + +   +   S +D+           
Sbjct: 36  FRFPASTLKFLETHYSSSLNLTTHFNNNKDDCNESTFKPDKFYASLIDD----------- 84

Query: 83  QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
            +  THL  +I+   +  GL    ++   L+   S  G +  AR LFD+ P+ DV  W+ 
Sbjct: 85  SIHKTHLN-QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNA 143

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           ++R Y R G    A+E+   M+   + P   +   ++   + +  +++G+ +H  + R+ 
Sbjct: 144 IVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHG 203

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
            +    V +   L+ +Y+KCG +  A  +F RL   ++VSWT +ISGY +  +  E +R+
Sbjct: 204 FESD--VFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRI 261

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F+EM + NV P  I ++S++     V  L+ GK +H  +++ G E    +  +L  +Y K
Sbjct: 262 FSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAK 321

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C  +  AR  F+ +++  ++ WNA+IS Y +    ++A ELF  MK   +RP+ +T+   
Sbjct: 322 CGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSS 381

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           ++ C + G+LE+ +W+  YI       DVI+ T+L+D YAKCG V+ A  +F     +D+
Sbjct: 382 IAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDV 441

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
            +W+AMM GYG+HG G E++I F  M ++GV PN +TF+GLL AC ++GLV EG  +F +
Sbjct: 442 VVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHR 501

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
           M    G+ P+ +HY C+VDLLGRAG LD A+  + +MP+ P + VWGALL+A K+H++ +
Sbjct: 502 M-RDYGIEPRHQHYACVVDLLGRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIHRHVT 560

Query: 563 MGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
           +GE AA ++  ++P N G+ V +SN+YA +  W+ VA VR +M+E  + K  G+S +E+N
Sbjct: 561 LGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIEIN 620

Query: 623 GLVHKFIRGGMVNWKS 638
           G +  F  G   + +S
Sbjct: 621 GKLQAFQAGDKTHPRS 636


>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
           mitochondrial [Vitis vinifera]
 gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/595 (35%), Positives = 341/595 (57%), Gaps = 4/595 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           + ++NS +T  +       AL ++  M++NG E +N T P++ KAC+++L     + +H 
Sbjct: 19  VAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHT 78

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K+    D +V  +++ MY +C  L  A  LF  MP RDV SW++MI G+ + G  + 
Sbjct: 79  HVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMILGFAQLGFVDR 138

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            + +  EM    IR   V +I +      + D+ + ++IH+  ++   D    V+++   
Sbjct: 139 VVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTD--VSVSNTW 196

Query: 216 IDMYSKCGNLAYAKQLFNRLNQ--NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           I  Y+KCG    A+ +F+ +++   + VSW  MI+GY    + ++ V  F +M+      
Sbjct: 197 IAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFFKKMLCGGFRA 256

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              TILSL+  C     L  GK +HA+ ++ G +  + + N L+ MY KC +I SAR LF
Sbjct: 257 DLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLF 316

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           D M  K  + W A+I+ YA+   +D+A  LF  M+    +P+ VT++ L+S C + GALE
Sbjct: 317 DNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALE 376

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           +GKW+ TY    GL+ ++++  AL+D+YAKCG ++ A  LF     + +  W  ++AG  
Sbjct: 377 LGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCA 436

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
           ++G  +EAL  F  M   G+KPN ITF+ +L AC+HAG + +G   F+ M     + P +
Sbjct: 437 LNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGL 496

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           +HY CM DLLGR G L EA E I++MP +P++ +W  LL+A K+H+N  +GE  A  + E
Sbjct: 497 DHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFE 556

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           +EPQ     V M+NIYA A +W+ VA +R +MK  +  K PG S V+VNG  H+F
Sbjct: 557 LEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAMKSPGKSLVQVNGKTHEF 611



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 233/481 (48%), Gaps = 38/481 (7%)

Query: 7   FLNLEQTRQCHAHIIKTHFK---FSYTNIIN---------------------PLTRYNSL 42
            LNL+ ++  H H++K+ F+   F  T++++                      +  +NS+
Sbjct: 67  LLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSM 126

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           +  + +       ++++  M   G   D+ T+  +  +   +    + + IH F IK G+
Sbjct: 127 ILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGI 186

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPN--RDVVSWSTMIRGYHRGGLPEEALEVM 160
           D D  VSN  I  Y++CG    A  +FD +    +  VSW++MI GY       +A+   
Sbjct: 187 DTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGFF 246

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALIDMY 219
           ++M     R     ++S++S       +  GK IHA  ++  C  +   + +   LI MY
Sbjct: 247 KKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSD---IQVINTLISMY 303

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
           SKCG++  A+ LF+ +   + VSWT MI+GY    +++E + LF+ M      P  +TI+
Sbjct: 304 SKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTII 363

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           SL+  CG  G L+LGKW+  Y   NG + +L + NAL+D+Y KC  + +AR LF  M  K
Sbjct: 364 SLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEK 423

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW-- 397
            ++ W  +I+  A      +A  LF  M    ++PN +T + +L  C  AG LE G W  
Sbjct: 424 SLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKG-WEC 482

Query: 398 --LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGM 454
             L T + K    +D    + + D+  + G +  A+       ++ D+ +W+ +++   +
Sbjct: 483 FNLMTKVYKINPGLDHY--SCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKI 540

Query: 455 H 455
           H
Sbjct: 541 H 541



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 177/366 (48%), Gaps = 11/366 (3%)

Query: 228 AKQLFNRL-NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
           A Q FNR  N  +V  W   I+  +     ++ + LF +M +  + P+ +T  S+   C 
Sbjct: 6   ATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACS 65

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
            +  L+  + +H +++++ F+  L +  ++VDMY KC ++  A  LF  M  +DV  WN+
Sbjct: 66  KLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNS 125

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           +I  +AQ   +D+   LF  M +  +R + VT++GL         L+M + +H++  K G
Sbjct: 126 MILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIG 185

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFS--EAIYRDICMWNAMMAGYGMHGCGEEALIF 464
           ++ DV +    +  YAKCG+   A  +F   +   +    WN+M+AGY       +A+ F
Sbjct: 186 IDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSKAVGF 245

Query: 465 FVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL--GLVPKIEHYGCMVDL 522
           F  M   G + +  T + LL++C    ++  GK +     HG+  G    I+    ++ +
Sbjct: 246 FKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIH---AHGIQVGCDSDIQVINTLISM 302

Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALLA--ASKLHKNPSMGEIAATQILEIEPQNYG 580
             + G +  A  +  +M L    + W A++A  A K   + +M   +A + +  +P    
Sbjct: 303 YSKCGDIGSARYLFDNM-LGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVT 361

Query: 581 YNVLMS 586
              LMS
Sbjct: 362 IISLMS 367


>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
          Length = 897

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 217/607 (35%), Positives = 352/607 (57%), Gaps = 16/607 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKN----GSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           + ++++  + N +    L+    M ++    G+  ++ T+ + L+AC  +    +G  +H
Sbjct: 179 WTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLH 238

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           GF +K G+     V ++L  MY++C S   AR LF E+P +D+VSW+++I  Y R G  E
Sbjct: 239 GFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAE 298

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIAT 213
           +A+E+   M    ++P EV +  +++   + A V  GK  HA +VR N  D    V I  
Sbjct: 299 KAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDS---VLIGN 355

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI--EENV 271
           ALI MY+KC  +  A  +F  L+Q    SW+ M+  Y +     + + L+ EM   +++ 
Sbjct: 356 ALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDE 415

Query: 272 FPSEITILSLIIECGF-VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           F  +   L  II     +G L+LG+  H Y +++    + ++ANAL+ MYG+C     AR
Sbjct: 416 FEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVAR 475

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +F  +K+KDV+ W+A+IS+Y+       A  L+  M    V+PN  T+V ++S C    
Sbjct: 476 KIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLA 535

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           ALE G+ +H++++  GLE D+ + TALVDMY KCG +  A ++F   + RD+  WN M++
Sbjct: 536 ALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMIS 595

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           GYGMHG   +AL  F  MER  VKPN +TF+ +L+AC HAGLV +G+ +F +M     L 
Sbjct: 596 GYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEE-YSLE 654

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           P ++HY CMVDLLG++G L EA +++ +MP+ P+  +WG LL A K+H N  MG   A +
Sbjct: 655 PNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKK 714

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIR 630
               +P+N GY +LMSN Y  A +WN++  +R +MK   V+K  G+S++++ G    F++
Sbjct: 715 AFASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTIDICG----FMK 770

Query: 631 GGMVNWK 637
             +  W+
Sbjct: 771 NQLTQWQ 777



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 155/534 (29%), Positives = 273/534 (51%), Gaps = 22/534 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL+ S  + +  +S L+ +  MR +G+    FT P +  A A++    +G  +H +++
Sbjct: 75  WNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSV 134

Query: 99  KNGL---DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + GL   DG   V+++L+ MY+ CGS+  A  LFDEMP RDVV+W+ +I G    G   E
Sbjct: 135 RFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGE 194

Query: 156 AL----EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV-- 209
            L     ++R       RP+   M S +     + ++ +G  +H   V      K GV  
Sbjct: 195 GLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGV------KAGVGH 248

Query: 210 --AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
             ++ ++L  MY+KC +   A+ LF  L +  +VSWT +I  Y R     + V LF  M 
Sbjct: 249 CPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGME 308

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
           E  + P E+ I  L+   G    ++ GK  HA I+R  F  S+ + NAL+ MY KC+++ 
Sbjct: 309 ESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVD 368

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEV---TMVGLLS 384
            A T+F  +  +D   W++++ AY +A    K  EL+  M+       E    +++ ++S
Sbjct: 369 IAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIIS 428

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
            C+  G L +G+  H Y  K     +  +  AL+ MY +CG+ + A ++F     +D+  
Sbjct: 429 SCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVT 488

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           W+A+++ Y   G  ++AL+ +  M   GVKPN  T + ++++C++   +  G+ +    V
Sbjct: 489 WSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGE-LIHSHV 547

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             +GL   +     +VD+  + G L  A +M  SM L  +++ W  +++   +H
Sbjct: 548 KDVGLECDLSICTALVDMYMKCGQLGIARKMFDSM-LERDVVTWNVMISGYGMH 600



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 220/424 (51%), Gaps = 6/424 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + SL+ +Y +      A+ ++  M ++G + D   I  +L           GK  H 
Sbjct: 281 LVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHA 340

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             ++        + NALI MY++C  +  A  +F  +  RD  SWS+M+  Y + GL  +
Sbjct: 341 AIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLK 400

Query: 156 ALEVMREMRFMDIRPSEV---AMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            LE+ REM+F D    E    ++IS++S  + +  + LG++ H   +++   E    ++A
Sbjct: 401 CLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGEN--SSVA 458

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            ALI MY +CGN   A+++F  +    VV+W+ +IS Y       + + L+ +M+ E V 
Sbjct: 459 NALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVK 518

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P+  T++S+I  C  +  L+ G+ +H+++   G E  L++  ALVDMY KC ++  AR +
Sbjct: 519 PNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKM 578

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FD M  +DV+ WN +IS Y       +A +LF  M+   V+PN +T + +LS C  AG +
Sbjct: 579 FDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLV 638

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAG 451
           + G+ L T +E+  LE ++     +VD+  K G +  A  + S   I  D  +W  ++  
Sbjct: 639 DKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGA 698

Query: 452 YGMH 455
             MH
Sbjct: 699 CKMH 702



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 190/382 (49%), Gaps = 5/382 (1%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H  A+ +GL      +  L+  YS  G    A   F   P  D   W++++R  HR   
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG-VAI 211
               L   R MR    RPS      + S  A++  + +G A+HA  VR    E  G VA+
Sbjct: 88  FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-- 269
           A++L+ MY++CG++  A +LF+ + +  VV+WT +ISG +   +  EG+     M+    
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207

Query: 270 --NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
                P+  T+ S +  CG +G L +G  LH + ++ G     ++ ++L  MY KC    
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            AR LF  +  KD++ W ++I AY +A   +KA ELF+ M+ S ++P+EV +  LL+   
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
               +  GK  H  I ++     V++  AL+ MYAKC  V+ A  +F     RD   W++
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSS 387

Query: 448 MMAGYGMHGCGEEALIFFVDME 469
           M+  Y   G   + L  + +M+
Sbjct: 388 MVVAYCKAGLDLKCLELYREMQ 409


>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
          Length = 1135

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 204/595 (34%), Positives = 331/595 (55%), Gaps = 7/595 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + S+++ Y +N +P +AL ++A M ++G   ++F     L ACA +     G+++H  A+
Sbjct: 82  WTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAV 141

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G  GDA++ + LI+MYS CGSL +A+ +FD M + DVV ++++I  + R G  E A E
Sbjct: 142 RAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAE 201

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
            + +M    ++P+E  M ++++    V    LG+ IH  +++        V  +TALID 
Sbjct: 202 ALIQMLKQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDF 257

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YS+ G    AK +F+ L+  +VVSW  M+  YIR   + E +++F +MI E V P+E  +
Sbjct: 258 YSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFAL 317

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
             ++  CG +G   LG+ LH   +++     + ++NAL+ MYG+   +     + + +++
Sbjct: 318 SIVLGACGSIG---LGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIEN 374

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D++ W   ISA  Q    +KA  L   M      PN      +LS C +  +L+ G   
Sbjct: 375 PDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQF 434

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    K G + ++    AL++MY+KCG +  A   F      D+  WN+++ G+  HG  
Sbjct: 435 HCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDA 494

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            +AL  F  M  +G+KP+  TF+G+L  C+H+G+V EG+  F  M+      P   HY C
Sbjct: 495 NKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYAC 554

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           M+D+LGR G  DEA  MI  MP  P+ ++W  LLA+ KLH+N  +G++AA +++E+  ++
Sbjct: 555 MIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRD 614

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGM 633
               VLMSNIYA+   W D   VRR M E  VKK+ G S +E+N  VH F    M
Sbjct: 615 SASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDM 669



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 224/447 (50%), Gaps = 21/447 (4%)

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV 179
           G L  A  LFD MP ++VV+W++++ GY R G PE AL +  +M    + P++ A  + +
Sbjct: 62  GRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAAL 121

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRL 235
              AD+  +  G+ +H+  VR       G A    I + LI+MYS+CG+L  AK++F+R+
Sbjct: 122 VACADLGALRAGEQVHSLAVR------AGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRM 175

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
           +   VV +T +IS + R  E         +M+++ + P+E T+ +++  C  V    LG+
Sbjct: 176 DSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV----LGQ 231

Query: 296 WLHAYILRN-GFEF-SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
            +H Y+++  G    S+  + AL+D Y +  E + A+ +FD +  K+V+ W +++  Y +
Sbjct: 232 QIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSMMQLYIR 291

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
              +++A ++F  M    V PNE  +  +L  C   G++ +G+ LH    K  L  D+ +
Sbjct: 292 DGRLEEALQVFGDMISEGVDPNEFALSIVLGAC---GSIGLGRQLHCSAIKHDLITDIRV 348

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
             AL+ MY + G V     + ++    D+  W   ++    +G GE+A+     M   G 
Sbjct: 349 SNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGF 408

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
            PNG  F  +L++C+    + +G   F  +   LG   +I     ++++  + G +  A 
Sbjct: 409 TPNGYAFSSVLSSCADVASLDQGMQ-FHCLALKLGCDSEICTGNALINMYSKCGQMGSAR 467

Query: 534 EMIKSMPLRPNMIVWGALLAASKLHKN 560
                M    ++  W +L+     H +
Sbjct: 468 LAFDVMHTH-DVTSWNSLIHGHAQHGD 493



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 200/396 (50%), Gaps = 19/396 (4%)

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
           E   V +    ++   K G LA A  LF+R+ + +VV+WT ++SGY R       + +FA
Sbjct: 44  ESPDVVLECKRLNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFA 103

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           +M+E  V P++    + ++ C  +G L+ G+ +H+  +R GF     + + L++MY +C 
Sbjct: 104 DMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCG 163

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            + +A+ +FD M S DV+ + ++ISA+ +    + A E  I M    ++PNE TM  +L+
Sbjct: 164 SLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILT 223

Query: 385 LCTEAGALEMGKWLHTY-IEKQGLEVD-VILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
            C       +G+ +H Y I+K GL    V   TAL+D Y++ G+   A  +F     +++
Sbjct: 224 ACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNV 279

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             W +MM  Y   G  EEAL  F DM   GV PN      +L AC   GL   G+ +   
Sbjct: 280 VSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL---GRQLHCS 336

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
            +    L+  I     ++ + GR GL++E   M+  +   P+++ W   ++A+  +    
Sbjct: 337 AIKH-DLITDIRVSNALLSMYGRTGLVEELEAMLNKIE-NPDLVSWTTAISANFQN---G 391

Query: 563 MGEIAATQILEIE-----PQNYGYNVLMSNIYAVAN 593
            GE A   + ++      P  Y ++ ++S+   VA+
Sbjct: 392 FGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVAS 427



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 1/149 (0%)

Query: 32  IINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           I NP L  + + +++  +N     A+ +   M   G   + +   ++L +CA V     G
Sbjct: 372 IENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQG 431

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
            + H  A+K G D +    NALI MYS+CG + SAR  FD M   DV SW+++I G+ + 
Sbjct: 432 MQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQH 491

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMV 179
           G   +ALEV  +MR   I+P +   + ++
Sbjct: 492 GDANKALEVFSKMRSNGIKPDDSTFLGVL 520


>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
          Length = 918

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 215/606 (35%), Positives = 352/606 (58%), Gaps = 14/606 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKN----GSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           + ++++  + N +    L+    M ++    G+  ++ T+ + L+AC  +    +G  +H
Sbjct: 179 WTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLH 238

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           GF +K G+     V ++L  MY++C S   AR LF E+P +D+VSW+++I  Y R G  E
Sbjct: 239 GFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAE 298

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           +A+E+   M    ++P EV +  +++   + A V  GK  HA +VR  ++    V I  A
Sbjct: 299 KAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVR--RNFGDSVLIGNA 356

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI--EENVF 272
           LI MY+KC  +  A  +F  L+Q    SW+ M+  Y +     + + L+ EM   +++ F
Sbjct: 357 LISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEF 416

Query: 273 PSEITILSLIIECGF-VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
             +   L  II     +G L+LG+  H Y +++    + ++ANAL+ MYG+C     AR 
Sbjct: 417 EYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARK 476

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +F  +K+KDV+ W+A+IS+Y+       A  L+  M    V+PN  T+V ++S C    A
Sbjct: 477 IFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAA 536

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           LE G+ +H++++  GLE D+ + TALVDMY KCG +  A ++F   + RD+  WN M++G
Sbjct: 537 LEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISG 596

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           YGMHG   +AL  F  MER  VKPN +TF+ +L+AC HAGLV +G+ +F +M     L P
Sbjct: 597 YGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRM-EEYSLEP 655

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
            ++HY CMVDLLG++G L EA +++ +MP+ P+  +WG LL A K+H N  MG   A + 
Sbjct: 656 NLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKA 715

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
              +P+N GY +LMSN Y  A +WN++  +R +MK   V+K  G+S++++ G    F++ 
Sbjct: 716 FASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTIDICG----FMKN 771

Query: 632 GMVNWK 637
            +  W+
Sbjct: 772 QLTQWQ 777



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 155/534 (29%), Positives = 273/534 (51%), Gaps = 22/534 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL+ S  + +  +S L+ +  MR +G+    FT P +  A A++    +G  +H +++
Sbjct: 75  WNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSV 134

Query: 99  KNGL---DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + GL   DG   V+++L+ MY+ CGS+  A  LFDEMP RDVV+W+ +I G    G   E
Sbjct: 135 RFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGE 194

Query: 156 AL----EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV-- 209
            L     ++R       RP+   M S +     + ++ +G  +H   V      K GV  
Sbjct: 195 GLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGV------KAGVGH 248

Query: 210 --AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
             ++ ++L  MY+KC +   A+ LF  L +  +VSWT +I  Y R     + V LF  M 
Sbjct: 249 CPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGME 308

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
           E  + P E+ I  L+   G    ++ GK  HA I+R  F  S+ + NAL+ MY KC+++ 
Sbjct: 309 ESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVD 368

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEV---TMVGLLS 384
            A T+F  +  +D   W++++ AY +A    K  EL+  M+       E    +++ ++S
Sbjct: 369 IAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIIS 428

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
            C+  G L +G+  H Y  K     +  +  AL+ MY +CG+ + A ++F     +D+  
Sbjct: 429 SCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVT 488

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           W+A+++ Y   G  ++AL+ +  M   GVKPN  T + ++++C++   +  G+ +    V
Sbjct: 489 WSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGE-LIHSHV 547

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             +GL   +     +VD+  + G L  A +M  SM L  +++ W  +++   +H
Sbjct: 548 KDVGLECDLSICTALVDMYMKCGQLGIARKMFDSM-LERDVVTWNVMISGYGMH 600



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 220/424 (51%), Gaps = 6/424 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + SL+ +Y +      A+ ++  M ++G + D   I  +L           GK  H 
Sbjct: 281 LVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHA 340

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             ++        + NALI MY++C  +  A  +F  +  RD  SWS+M+  Y + GL  +
Sbjct: 341 AIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLK 400

Query: 156 ALEVMREMRFMDIRPSEV---AMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            LE+ REM+F D    E    ++IS++S  + +  + LG++ H   +++   E    ++A
Sbjct: 401 CLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGEN--SSVA 458

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            ALI MY +CGN   A+++F  +    VV+W+ +IS Y       + + L+ +M+ E V 
Sbjct: 459 NALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVK 518

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P+  T++S+I  C  +  L+ G+ +H+++   G E  L++  ALVDMY KC ++  AR +
Sbjct: 519 PNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKM 578

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FD M  +DV+ WN +IS Y       +A +LF  M+   V+PN +T + +LS C  AG +
Sbjct: 579 FDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLV 638

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAG 451
           + G+ L T +E+  LE ++     +VD+  K G +  A  + S   I  D  +W  ++  
Sbjct: 639 DKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGA 698

Query: 452 YGMH 455
             MH
Sbjct: 699 CKMH 702



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 190/382 (49%), Gaps = 5/382 (1%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H  A+ +GL      +  L+  YS  G    A   F   P  D   W++++R  HR   
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG-VAI 211
               L   R MR    RPS      + S  A++  + +G A+HA  VR    E  G VA+
Sbjct: 88  FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-- 269
           A++L+ MY++CG++  A +LF+ + +  VV+WT +ISG +   +  EG+     M+    
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207

Query: 270 --NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
                P+  T+ S +  CG +G L +G  LH + ++ G     ++ ++L  MY KC    
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            AR LF  +  KD++ W ++I AY +A   +KA ELF+ M+ S ++P+EV +  LL+   
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
               +  GK  H  I ++     V++  AL+ MYAKC  V+ A  +F     RD   W++
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSS 387

Query: 448 MMAGYGMHGCGEEALIFFVDME 469
           M+  Y   G   + L  + +M+
Sbjct: 388 MVVAYCKAGLDLKCLELYREMQ 409


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/548 (35%), Positives = 317/548 (57%), Gaps = 2/548 (0%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           K IH   ++  LD D Y+ N ++    + GS   ++ +F ++   ++  W+TMIRG    
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
              ++A+ +   MR     P+   +  ++   A   DV LG  IH+ +V+   D    V 
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHD--VF 150

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           + T+L+ +Y KC N   A ++F+ +   +VVSWT +I+GYI      E +  F +++E  
Sbjct: 151 VKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMG 210

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + P   +++ ++  C  +G    G+W+  YI  +G   ++ +A +L+DMY KC  +  A 
Sbjct: 211 LKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERAN 270

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +F  M  KD++ W+ +I  YA      +A +LF  M+   ++P+  TMVG+LS C   G
Sbjct: 271 LIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLG 330

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           AL++G W  + +++     + +L TAL+DMY+KCG V  A+ +F+    +D  +WNAMM 
Sbjct: 331 ALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMV 390

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           G  M+G  +     F  +E+ G++P+  TFIGLL  C+H G V EG+  F+ M     L 
Sbjct: 391 GLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLT 450

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           P IEHYGCMVDLLGRAGLL+EAH++I +MP++PN +VWGALL   KLHK+  + E    +
Sbjct: 451 PSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKK 510

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIR 630
           ++E+EP N G  V +SNIY+  +RW +   +R  MKE +++K    S +E++G+VH+F+ 
Sbjct: 511 LIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLV 570

Query: 631 GGMVNWKS 638
           G   +W S
Sbjct: 571 GDKSHWLS 578



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 251/498 (50%), Gaps = 35/498 (7%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHF-----------------------KFSYTNIINP-LTR 38
           + NG     Q +  HA +++ H                        K  ++ +  P +  
Sbjct: 22  LSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFL 81

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++   +  +    A+++Y  MR  G   +NFTIP +LKACA+ L   LG +IH   +
Sbjct: 82  WNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLV 141

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G D D +V  +L+ +Y +C +   A  +FD++P+++VVSW+ +I GY   G   EA+ 
Sbjct: 142 KAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIG 201

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--VAIATALI 216
             +++  M ++P   +++ +++  A + D   G+ I     R   D  +G  V +AT+L+
Sbjct: 202 AFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWID----RYISDSGMGRNVFVATSLL 257

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           DMY KCGNL  A  +F+ + +  +VSW+ MI GY       + + LF +M  EN+ P   
Sbjct: 258 DMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCY 317

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T++ ++  C  +G L LG W  + + RN F  +  +  AL+DMY KC  +  A  +F  M
Sbjct: 318 TMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAM 377

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           K KD ++WNA++   +        F LF  ++   +RP+E T +GLL  CT  G +  G+
Sbjct: 378 KRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGR 437

Query: 397 WLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGM 454
                +++   L   +     +VD+  + G +N A++L +    + +  +W A++ G  +
Sbjct: 438 QFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKL 497

Query: 455 HG---CGEEALIFFVDME 469
           H      E+ L   +++E
Sbjct: 498 HKDTHLAEQVLKKLIELE 515


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 196/548 (35%), Positives = 317/548 (57%), Gaps = 2/548 (0%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           K IH   ++  LD D Y+ N ++    + GS   ++ +F ++   ++  W+TMIRG    
Sbjct: 33  KHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNTMIRGLVSK 92

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
              ++A+ +   MR     P+   +  ++   A   DV LG  IH+ +V+   D    V 
Sbjct: 93  DCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHD--VF 150

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           + T+L+ +Y KC N   A ++F+ +   +VVSWT +I+GYI      E +  F +++E  
Sbjct: 151 VKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMG 210

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + P   +++ ++  C  +G    G+W+  YI  +G   ++ +A +L+DMY KC  +  A 
Sbjct: 211 LKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERAN 270

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +F  M  KD++ W+ +I  YA      +A +LF  M+   ++P+  TMVG+LS C   G
Sbjct: 271 LIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLG 330

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           AL++G W  + +++     + +L TAL+DMY+KCG V  A+ +F+    +D  +WNAMM 
Sbjct: 331 ALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMV 390

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           G  M+G  +     F  +E+ G++P+  TFIGLL  C+H G V EG+  F+ M     L 
Sbjct: 391 GLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLT 450

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           P IEHYGCMVDLLGRAGLL+EAH++I +MP++PN +VWGALL   KLHK+  + E    +
Sbjct: 451 PSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKK 510

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIR 630
           ++E+EP N G  V +SNIY+  +RW +   +R  MKE +++K    S +E++G+VH+F+ 
Sbjct: 511 LIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWIEIDGIVHEFLV 570

Query: 631 GGMVNWKS 638
           G   +W S
Sbjct: 571 GDKSHWLS 578



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 251/498 (50%), Gaps = 35/498 (7%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHF-----------------------KFSYTNIINP-LTR 38
           + NG     Q +  HA +++ H                        K  ++ +  P +  
Sbjct: 22  LSNGLNFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFL 81

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++   +  +    A+++Y  MR  G   +NFTIP +LKACA+ L   LG +IH   +
Sbjct: 82  WNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLV 141

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G D D +V  +L+ +Y +C +   A  +FD++P+++VVSW+ +I GY   G   EA+ 
Sbjct: 142 KAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIG 201

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--VAIATALI 216
             +++  M ++P   +++ +++  A + D   G+ I     R   D  +G  V +AT+L+
Sbjct: 202 AFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWID----RYISDSGMGRNVFVATSLL 257

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           DMY KCGNL  A  +F+ + +  +VSW+ MI GY       + + LF +M  EN+ P   
Sbjct: 258 DMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCY 317

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T++ ++  C  +G L LG W  + + RN F  +  +  AL+DMY KC  +  A  +F  M
Sbjct: 318 TMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAM 377

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           K KD ++WNA++   +        F LF  ++   +RP+E T +GLL  CT  G +  G+
Sbjct: 378 KKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGR 437

Query: 397 WLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGM 454
                +++   L   +     +VD+  + G +N A++L +    + +  +W A++ G  +
Sbjct: 438 QFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKL 497

Query: 455 HG---CGEEALIFFVDME 469
           H      E+ L   +++E
Sbjct: 498 HKDTHLAEQVLKKLIELE 515


>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 218/618 (35%), Positives = 327/618 (52%), Gaps = 72/618 (11%)

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
           +YI+ N P  A  +Y  M  N    DN+T P +++AC+        K++H   +K G D 
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           D YV N LI  +S C ++  A  +F+E    D VSW++++ GY   G  EEA  +  +M 
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP 306

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
              I    +A  SM+ LF           +   VV  CK                     
Sbjct: 307 ERSI----IASNSMIVLFG----------MRGLVVEACK--------------------- 331

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
                 LF+ + +  +V+W+ +I+ + +     E +R F  M +  V   E+  +S +  
Sbjct: 332 ------LFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSA 385

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD---------- 334
           C  +  + +GK +H+  L+ G E  + + NAL+ MY KC +I  AR LFD          
Sbjct: 386 CANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISW 445

Query: 335 ---------------------GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
                                 M  KDV+ W+++IS YAQ    D+   LF  M++S  +
Sbjct: 446 NSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFK 505

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           P+E T+V ++S C    ALE GKW+H YI++ GL ++VIL T L+DMY KCG V  A  +
Sbjct: 506 PDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEV 565

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F   I + I  WNA++ G  M+G  E +L  F +M++  V PN ITF+G+L AC H GLV
Sbjct: 566 FYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLV 625

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            EG+  F  M+H   + P ++HYGCMVDLLGRAG L EA E++  MP+ P++  WGALL 
Sbjct: 626 DEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLG 685

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           A K H +  MG     +++E++P + G++VL+SNIYA   +W+DV  +R +M + RV K 
Sbjct: 686 ACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKI 745

Query: 614 PGFSSVEVNGLVHKFIRG 631
           PG S +E NG++H+F+ G
Sbjct: 746 PGCSMIEANGVIHEFLAG 763



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 177/348 (50%), Gaps = 35/348 (10%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +++L+  + +N     A+  +  M K G  VD     + L ACA +L+ ++GK IH 
Sbjct: 341 MVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHS 400

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE------------------------ 131
            ++K G +    + NALI MYS+CG ++ AR LFDE                        
Sbjct: 401 LSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDN 460

Query: 132 -------MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
                  MP +DVVSWS+MI GY +  L +E L + +EM+    +P E  ++S++S  A 
Sbjct: 461 AKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACAR 520

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
           +A ++ GK +HA + RN     + V + T LIDMY KCG +  A ++F  + +  + +W 
Sbjct: 521 LAALEQGKWVHAYIKRN--GLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWN 578

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK-WLHAYILR 303
            +I G      +   + +F+ M + +V P+EIT + ++  C  +G +  G+   ++ I  
Sbjct: 579 ALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHD 638

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
           +  + ++     +VD+ G+  +++ A  L + M  + DV  W A++ A
Sbjct: 639 HKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGA 686


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 218/647 (33%), Positives = 343/647 (53%), Gaps = 62/647 (9%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           +P   +N L+  +IK  +  SA+N+   M + G+ +D+FT+P +LKAC ++     G   
Sbjct: 80  SPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAF 139

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR---DVVSWSTMIRGYHRG 150
           HG    NG + + ++ NAL+ MYS CGSL  A  +FDE+  R   DV+SW++++  + + 
Sbjct: 140 HGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKS 199

Query: 151 GLPEEALEVMREMRFM------DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
                AL++  +M  +      + R   +++++++     +  V   K +H   +RN   
Sbjct: 200 SNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRN--G 257

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
             L V +  ALID Y+KCG +  A ++FN +    VVSW  M++GY +         LF 
Sbjct: 258 TFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFK 317

Query: 265 EMIEENV-----------------------------------FPSEITILSLIIECGFVG 289
            M +EN+                                    P+ +TI+S++  C  +G
Sbjct: 318 NMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLG 377

Query: 290 GLQLGKWLHAYILRN----------GFEFSLAMANALVDMYGKCREIRSARTLFDG--MK 337
               G  +HAY L+N          G +  L + NAL+DMY KCR  ++AR++FD   ++
Sbjct: 378 AFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLE 437

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHM--KVSKVRPNEVTMVGLLSLCTEAGALEMG 395
            ++V+ W  +I  +AQ    + A +LF+ M  +   V PN  T+  +L  C    A+ +G
Sbjct: 438 ERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIG 497

Query: 396 KWLHTYIEK--QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           K +H Y+ +  Q       +   L++MY+KCGDV+ A  +F     +    W +MM GYG
Sbjct: 498 KQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYG 557

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
           MHG G EAL  F  M ++G  P+ ITF+ +L ACSH G+V +G S FD M    GL P+ 
Sbjct: 558 MHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRA 617

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHY   +DLL R G LD+A + +K MP+ P  +VW ALL+A ++H N  + E A  +++E
Sbjct: 618 EHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVE 677

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
           +  +N G   L+SNIYA A RW DVA +R +MK+  +KK PG S V+
Sbjct: 678 MNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQ 724



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 253/498 (50%), Gaps = 64/498 (12%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFM------RKNGSEVDNFTIPTILKACAQVLM 86
           I+ +  +NS+V++++K++   +AL++++ M      +      D  +I  IL AC  +  
Sbjct: 183 IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKA 242

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
               KE+HG AI+NG   D +V NALI  Y++CG + +A  +F+ M  +DVVSW+ M+ G
Sbjct: 243 VPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAG 302

Query: 147 YHRGG----------------LP-------------------EEALEVMREMRFMDIRPS 171
           Y + G                +P                    EAL V R+M F    P+
Sbjct: 303 YSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPN 362

Query: 172 EVAMISMVSLFADVADVDLGKAIHACVVRNC----------KDEKLGVAIATALIDMYSK 221
            V +IS++S  A +     G  IHA  ++NC          +DE L   +  ALIDMYSK
Sbjct: 363 CVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDL--MVYNALIDMYSK 420

Query: 222 CGNLAYAKQLFNR--LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE--NVFPSEIT 277
           C +   A+ +F+   L + +VV+WTVMI G+ +  + N+ ++LF EMI E   V P+  T
Sbjct: 421 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 480

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA--MANALVDMYGKCREIRSARTLFDG 335
           I  +++ C  +  +++GK +HAY+LR+    S A  +AN L++MY KC ++ +AR +FD 
Sbjct: 481 ISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDS 540

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M  K  + W ++++ Y       +A ++F  M+ +   P+++T + +L  C+  G ++ G
Sbjct: 541 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 600

Query: 396 -KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYG 453
             +  +     GL          +D+ A+ G ++ A++   +  +     +W A+++   
Sbjct: 601 LSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACR 660

Query: 454 MHG---CGEEALIFFVDM 468
           +H      E AL   V+M
Sbjct: 661 VHSNVELAEHALNKLVEM 678



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 127/510 (24%), Positives = 228/510 (44%), Gaps = 62/510 (12%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           +   ++  Y  CG+   A  + + +     V W+ +IR + + G  + A+ V   M    
Sbjct: 53  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
            R     +  ++    ++     G A H  +   C   +  V I  AL+ MYS+CG+L  
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLIC--CNGFESNVFICNALVAMYSRCGSLEE 170

Query: 228 AKQLFNRLNQ---NSVVSWTVMISGYIRCNEINEGVRLFAEMI------EENVFPSEITI 278
           A  +F+ + Q   + V+SW  ++S +++ +     + LF++M         N     I+I
Sbjct: 171 ASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISI 230

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           ++++  CG +  +   K +H   +RNG    + + NAL+D Y KC  + +A  +F+ M+ 
Sbjct: 231 VNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEF 290

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR------------------------- 373
           KDV+ WNA+++ Y+Q+     AFELF +M+   +                          
Sbjct: 291 KDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNV 350

Query: 374 ----------PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ----------GLEVDVIL 413
                     PN VT++ +LS C   GA   G  +H Y  K           G + D+++
Sbjct: 351 FRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMV 410

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIY--RDICMWNAMMAGYGMHGCGEEALIFFVDM--E 469
             AL+DMY+KC     A  +F +     R++  W  M+ G+  +G   +AL  FV+M  E
Sbjct: 411 YNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 470

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGL 528
             GV PN  T   +L AC+H   +  GK +   ++ H            C++++  + G 
Sbjct: 471 PYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGD 530

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +D A  +  SM  + + I W +++    +H
Sbjct: 531 VDTARHVFDSMSQK-SAISWTSMMTGYGMH 559



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 178/341 (52%), Gaps = 26/341 (7%)

Query: 31  NIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           NI   +  + +++  Y +      ALN++  M  +GS  +  TI ++L ACA +     G
Sbjct: 323 NIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 382

Query: 91  KEIHGFAIKN----------GLDGDAYVSNALIQMYSECGSLVSARYLFDEMP--NRDVV 138
            EIH +++KN          G D D  V NALI MYS+C S  +AR +FD++P   R+VV
Sbjct: 383 MEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 442

Query: 139 SWSTMIRGYHRGGLPEEALEVMREM--RFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           +W+ MI G+ + G   +AL++  EM      + P+   +  ++   A +A + +GK IHA
Sbjct: 443 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 502

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
            V+R+ + +     +A  LI+MYSKCG++  A+ +F+ ++Q S +SWT M++GY      
Sbjct: 503 YVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRG 562

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL------ 310
           +E + +F +M +    P +IT L ++  C   G +  G    +Y      ++ L      
Sbjct: 563 SEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGL---SYFDSMSADYGLTPRAEH 619

Query: 311 -AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
            A A  L+  +G  R  ++ +T+ D       ++W A++SA
Sbjct: 620 YAYAIDLLARFG--RLDKAWKTVKDMPMEPTAVVWVALLSA 658



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 174/397 (43%), Gaps = 54/397 (13%)

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
           ++ T ++  Y  CG   YA  +  R+  +  V W ++I  +I+   ++  + +   M+  
Sbjct: 52  SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 111

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
                  T+  ++  CG +   + G   H  I  NGFE ++ + NALV MY +C  +  A
Sbjct: 112 GTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 171

Query: 330 RTLFDGMKSK---DVMIWNAVISAYAQAHCIDKAFELF------IHMKVSKVRPNEVTMV 380
             +FD +  +   DV+ WN+++SA+ ++     A +LF      +H K +  R + +++V
Sbjct: 172 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 231

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
            +L  C    A+   K +H    + G  +DV +  AL+D YAKCG +  A ++F+   ++
Sbjct: 232 NILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 291

Query: 441 DICMWNAM-----------------------------------MAGYGMHGCGEEALIFF 465
           D+  WNAM                                   +AGY   GC  EAL  F
Sbjct: 292 DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVF 351

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV---------PKIEHY 516
             M  SG  PN +T I +L+AC+  G  ++G  +    +    L            +  Y
Sbjct: 352 RQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVY 411

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRP-NMIVWGALL 552
             ++D+  +      A  +   +PL   N++ W  ++
Sbjct: 412 NALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMI 448


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 211/594 (35%), Positives = 343/594 (57%), Gaps = 3/594 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +NS++++Y  N +   AL ++  M+K     + +T    L+AC        G  IH 
Sbjct: 247 VVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHA 306

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K+    + +V+NALI MY+  G +  A  +F  M + D +SW++M+ G+ + GL  E
Sbjct: 307 TVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHE 366

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL+   EMR    +P  VA+IS+++  A   +   G  IHA  ++N  D  L V    +L
Sbjct: 367 ALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVG--NSL 424

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+K  ++ Y   +F+++    VVSWT +I+G+ +    +  + LF E+  E +    
Sbjct: 425 VDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDV 484

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           + I S+++ C  +  +   K +H+YI+R G    L + N +VD+YG+C  +  A  +F+ 
Sbjct: 485 MMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFEL 543

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++ KDV+ W ++IS Y      ++A ELF  MK + V P+ +++V +LS      AL+ G
Sbjct: 544 IEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKG 603

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           K +H ++ ++G  ++  L + LVDMYA+CG +  +  +F+    +D+ +W +M+  YGMH
Sbjct: 604 KEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMH 663

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           GCG  A+  F  ME   + P+ I F+ +L ACSH+GL+ EG+   + M +   L P  EH
Sbjct: 664 GCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEH 723

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y C+VDLLGRA  L+EA++ +K M + P   VW ALL A ++H N  +GEIAA ++LE++
Sbjct: 724 YACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMD 783

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           P+N G  VL+SN+Y+   RW DV  VR  MK   +KK PG S +EV   VH F+
Sbjct: 784 PENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGNKVHTFM 837



 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 156/521 (29%), Positives = 288/521 (55%), Gaps = 6/521 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++ +Y+ N +P  +L +Y  MR +G  +D  T P ILKAC  +     G E+HG AI
Sbjct: 148 WNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAI 207

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR-DVVSWSTMIRGYHRGGLPEEAL 157
           K G     +V+N+++ MY++C  L  AR LFD MP + DVVSW++MI  Y   G   EAL
Sbjct: 208 KEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEAL 267

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            +  EM+   + P+    ++ +    D + +  G  IHA V+++     + V +A ALI 
Sbjct: 268 RLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS--SYYINVFVANALIA 325

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY++ G +  A  +F  ++    +SW  M+SG+++    +E ++ + EM +    P  + 
Sbjct: 326 MYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVA 385

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++S+I      G    G  +HAY ++NG +  L + N+LVDMY K   ++    +FD M 
Sbjct: 386 VISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP 445

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KDV+ W  +I+ +AQ     +A ELF  +++  +  + + +  +L  C+    +   K 
Sbjct: 446 DKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKE 505

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H+YI ++GL  D++L+  +VD+Y +CG+V+ A R+F    ++D+  W +M++ Y  +G 
Sbjct: 506 IHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGL 564

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
             EAL  F  M+ +GV+P+ I+ + +L+A +    + +GK +   ++   G V +     
Sbjct: 565 ANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRK-GFVLEGSLAS 623

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            +VD+  R G L+++  +   +  + ++++W +++ A  +H
Sbjct: 624 TLVDMYARCGTLEKSRNVFNFIRNK-DLVLWTSMINAYGMH 663



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 246/480 (51%), Gaps = 7/480 (1%)

Query: 76  TILKACAQVLMTHLGKEIHGFAI-KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN 134
           ++L+ C        G+++H   I  N L    ++S  L+ MY +CG LV A  LFD MP+
Sbjct: 83  SVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPH 142

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           + + +W+ MI  Y   G P  +LE+ REMR   I         ++     + D   G  +
Sbjct: 143 KTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEV 202

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL-NQNSVVSWTVMISGYIRC 253
           H   ++        V +A +++ MY+KC +L  A+QLF+R+  +  VVSW  MIS Y   
Sbjct: 203 HGLAIKEGYVSI--VFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSN 260

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
            +  E +RLF EM + ++ P+  T ++ +  C     ++ G ++HA +L++ +  ++ +A
Sbjct: 261 GQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVA 320

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           NAL+ MY +  ++  A  +F  M   D + WN+++S + Q     +A + +  M+ +  +
Sbjct: 321 NALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQK 380

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           P+ V ++ +++    +G    G  +H Y  K GL+ D+ +  +LVDMYAK   +     +
Sbjct: 381 PDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCI 440

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F +   +D+  W  ++AG+  +G    AL  F +++  G+  + +    +L ACS   L+
Sbjct: 441 FDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLI 500

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           +  K +   ++   GL   +   G +VD+ G  G +D A  M + +  + +++ W ++++
Sbjct: 501 SSVKEIHSYIIRK-GLSDLVLQNG-IVDVYGECGNVDYAARMFELIEFK-DVVSWTSMIS 557


>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
          Length = 748

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 210/560 (37%), Positives = 313/560 (55%), Gaps = 44/560 (7%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           K+IH   IK GL    +  + LI+    S  G+L  A  LF+ +   +   W+TMIRG  
Sbjct: 49  KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGNS 108

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
               P  A++    M    + P+      ++   A V     GK IH  V+      KLG
Sbjct: 109 LSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVL------KLG 162

Query: 209 VA----IATALIDMYSKCGNLAYA-------------------------------KQLFN 233
           +     + T+LI+MY++ G L YA                               ++LF 
Sbjct: 163 LESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFE 222

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL 293
            +     VSW  MI+GY +     E +  F EM   NV P+E T+++++  C   G L+L
Sbjct: 223 EIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLEL 282

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           G W+ ++I  +G   +L + NAL+DMY KC ++  AR LF+G+  KD++ WN +I  Y+ 
Sbjct: 283 GNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVMIGGYSH 342

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV-DVI 412
            +   +A  LF  M+ S V PN+VT V +L  C   GAL++GKW+H YI+K+ L + +  
Sbjct: 343 MNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTS 402

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           L T+L+DMYAKCG++  A ++F+    + +  WNAM++G  MHG    AL  F  M   G
Sbjct: 403 LWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEG 462

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
            +P+ ITF+G+L+ACSHAGLV  G+  F  MV    + PK++HYGCM+DLLGRAGL DEA
Sbjct: 463 FEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEA 522

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVA 592
             ++K+M ++P+  +WG+LL A ++H N  +GE AA  + E+EP+N G  VL+SNIYA A
Sbjct: 523 EALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATA 582

Query: 593 NRWNDVAGVRRVMKEIRVKK 612
            RW+DVA +R  + +  +KK
Sbjct: 583 GRWDDVARIRTKLNDKGMKK 602



 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 155/461 (33%), Positives = 247/461 (53%), Gaps = 46/461 (9%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           I N + R NSL +S      P  A++ Y  M   G E +++T P +LK+CA+V  T  GK
Sbjct: 99  IWNTMIRGNSLSSS------PVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGK 152

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGS------------------------------ 121
           +IHG  +K GL+ D +V  +LI MY++ G                               
Sbjct: 153 QIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRG 212

Query: 122 -LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
            L  AR LF+E+P RD VSW+ MI GY + G  EEAL   +EM+  ++ P+E  M++++S
Sbjct: 213 CLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLS 272

Query: 181 LFADVADVDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
             A    ++LG  + + +    +D  LG  + +  ALIDMYSKCG+L  A+ LF  + + 
Sbjct: 273 ACAQSGSLELGNWVRSWI----EDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEK 328

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
            ++SW VMI GY   N   E + LF +M + NV P+++T +S++  C ++G L LGKW+H
Sbjct: 329 DIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIH 388

Query: 299 AYILRNGFEFS-LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           AYI +     +  ++  +L+DMY KC  I +A+ +F GMK K +  WNA+IS  A     
Sbjct: 389 AYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHA 448

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW-LHTYIEKQGLEVDVILKTA 416
           + A ELF  M+     P+++T VG+LS C+ AG +E+G+    + +E   +   +     
Sbjct: 449 NMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGC 508

Query: 417 LVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
           ++D+  + G  + A  L     +  D  +W +++    +HG
Sbjct: 509 MIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHG 549


>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 216/602 (35%), Positives = 348/602 (57%), Gaps = 6/602 (0%)

Query: 32  IINP--LTRYNSLVTSYIKNNKPSSALNIY-AFMRKNGSEVDNFTIPTILKACAQVLMTH 88
           I NP  ++  N L+  Y +N     AL ++   M     + D++T P++LKAC  +    
Sbjct: 64  IENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVV 123

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           LG+ IH   +K GL  D  V ++L+ MY++C     A  LFDEMP++DV  W+T+I  Y+
Sbjct: 124 LGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYY 183

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           + G  EEAL     MR     P  V + + +S  A + D+D G+ IH  +V +    ++ 
Sbjct: 184 QSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNS--GFRMD 241

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
             ++ AL+DMY KCG L  A ++F ++   +VV+W  MI+GY    +    ++LF  M  
Sbjct: 242 SFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYS 301

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
           E V P+  T+ S ++ C     L  GK++H YI+RN  +  + + ++L+D+Y KC ++ S
Sbjct: 302 EGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVES 361

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           A T+F  M     + WN +IS Y     +  A  LF  M  S V P+ +T   +L+ C++
Sbjct: 362 AETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQ 421

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
             ALE G+ +H  I ++ L  + ++  AL+DMYAKCG V  A+ +F     RD+  W +M
Sbjct: 422 LAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSM 481

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +  YG HG   EAL  F +M +S VKP+ +TF+ +L+ACSHAGLV +G   F++M++  G
Sbjct: 482 ITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYG 541

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP-LRPNMIVWGALLAASKLHKNPSMGEIA 567
           ++P+IEHY C++ LLGRAG L EA+E+++S P +  +  +   L +A +LHKN  +G   
Sbjct: 542 IIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEI 601

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHK 627
           A  +++ +P +    +++SN+YA   +W++V  VR  MK++ +KK PG S +E+N  +  
Sbjct: 602 AENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIEINEKIVP 661

Query: 628 FI 629
           F 
Sbjct: 662 FF 663



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/488 (29%), Positives = 246/488 (50%), Gaps = 9/488 (1%)

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           IP +L+A         GK +H   +  GL  D YV   LI +Y  C     A+ +FD + 
Sbjct: 7   IP-LLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIE 65

Query: 134 NRDVVSWST-MIRGYHRGGLPEEALEVMRE-MRFMDIRPSEVAMISMVSLFADVADVDLG 191
           N   +S    ++ GY R  + +EAL +  + M +  ++P      S++     +  V LG
Sbjct: 66  NPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLG 125

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           + IH C+V+  +   + + + ++L+ MY+KC     A +LF+ +    V  W  +IS Y 
Sbjct: 126 QMIHTCLVK--EGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYY 183

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +  +  E +R F  M      P  +TI + I  C  +  L  G+ +H  ++ +GF     
Sbjct: 184 QSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSF 243

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           ++ ALVDMYGKC ++  A  +F+ M +K V+ WN++I+ Y          +LF  M    
Sbjct: 244 VSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEG 303

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           V+P   T+   L  C+++  L  GK++H YI +  ++ D+ L ++L+D+Y KCG V  A 
Sbjct: 304 VKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAE 363

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
            +F          WN M++GY   G   +AL  F +M +S V+P+ ITF  +L ACS   
Sbjct: 364 TIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLA 423

Query: 492 LVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
            + +G+ + + +V   LG    +   G ++D+  + G ++EA  + K +P R +++ W +
Sbjct: 424 ALEKGREIHNLIVERNLGNNEVV--MGALLDMYAKCGAVEEAFGVFKCLPER-DLVSWTS 480

Query: 551 LLAASKLH 558
           ++ A   H
Sbjct: 481 MITAYGSH 488



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 6/179 (3%)

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS--E 436
           ++ LL     + +L+ GK LH  +   GL+ DV +   L+ +Y  C   + A  +F   E
Sbjct: 6   LIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIE 65

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVD-MERSGVKPNGITFIGLLNACSHAGLVTE 495
             + +I + N +MAGY  +   +EAL  F   M    +KP+  T+  +L AC     V  
Sbjct: 66  NPF-EISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVL 124

Query: 496 GKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           G+ +   +V   GL+  I     +V +  +    + A ++   MP + ++  W  +++ 
Sbjct: 125 GQMIHTCLVKE-GLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDK-DVACWNTVISC 181


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  394 bits (1011), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 210/599 (35%), Positives = 340/599 (56%), Gaps = 3/599 (0%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           + +T +N  ++SY++  +   A++ +  M K+    D+ T   IL   A +    LGK+I
Sbjct: 260 SDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQI 319

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG  ++ G D    V+N+ I MY + GS+  AR +F +M   D++SW+T+I G  R GL 
Sbjct: 320 HGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLE 379

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD-LGKAIHACVVRNCKDEKLGVAIA 212
           E +L +  ++    + P +  + S++   + + +   +G+ +H C ++      L   ++
Sbjct: 380 ECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALK--AGIVLDSFVS 437

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           TALID+YSK G +  A+ LF+  +   + SW  M+ G+   +   E +RLF+ M E    
Sbjct: 438 TALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEK 497

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
             +IT  +     G +  LQ GK +HA +++  F + L + + ++DMY KC E++SAR +
Sbjct: 498 ADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKV 557

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ + S D + W  VIS   +    ++A   +  M+++ V+P+E T   L+  C+   AL
Sbjct: 558 FNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTAL 617

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           E GK +H  I K     D  + T+LVDMYAKCG++  AY LF     R + +WNAM+ G 
Sbjct: 618 EQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGL 677

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             HG  EEAL FF +M+  GV P+ +TFIG+L+ACSH+GL ++    FD M    G+ P+
Sbjct: 678 AQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPE 737

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           IEHY C+VD L RAG + EA +++ SMP   +  ++  LL A ++  +   GE  A ++ 
Sbjct: 738 IEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLF 797

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            ++P +    VL+SNIYA AN+W +    R +MK + VKKEPGFS +++   VH F+ G
Sbjct: 798 TMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAG 856



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 146/567 (25%), Positives = 262/567 (46%), Gaps = 56/567 (9%)

Query: 36  LTRYNSLVTSYIKN------NKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL 89
           L  YN+++ +Y          K   A +I+  +R++       T+  + K C        
Sbjct: 81  LVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSA 140

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
            + + G+A+K GL  D +V+ AL+ +Y++   +  AR LFD MP RDVV W+ M++ Y  
Sbjct: 141 SEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVE 200

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
            G  +E L +        +RP  V++ +++                           +GV
Sbjct: 201 MGAGDEVLGLFSAFHRSGLRPDCVSVRTIL---------------------------MGV 233

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
              T       +    AYA +LF   + + V  W   +S Y++  E  E V  F +MI+ 
Sbjct: 234 GKKTVFERELEQVR--AYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKS 291

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            V    +T + ++     +  L+LGK +H  ++R G++  +++AN+ ++MY K   +  A
Sbjct: 292 RVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYA 351

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           R +F  MK  D++ WN VIS  A++   + +  LFI +  S + P++ T+  +L  C+  
Sbjct: 352 RRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACS-- 409

Query: 390 GALE----MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
            +LE    +G+ +HT   K G+ +D  + TAL+D+Y+K G +  A  LF      D+  W
Sbjct: 410 -SLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASW 468

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           NAMM G+ +     EAL  F  M   G K + ITF    NA   AG +   +    K +H
Sbjct: 469 NAMMHGFTVSDNYREALRLFSLMHERGEKADQITFA---NAAKAAGCLVRLQQ--GKQIH 523

Query: 506 GLGLVPKIEHYGCMV-----DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA--SKLH 558
            + +  +  HY   V     D+  + G +  A ++   +P  P+ + W  +++       
Sbjct: 524 AVVIKMRF-HYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGCVENGE 581

Query: 559 KNPSMGEIAATQILEIEPQNYGYNVLM 585
           +  ++      ++  ++P  Y +  L+
Sbjct: 582 EEQALFTYHQMRLAGVQPDEYTFATLV 608



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 214/460 (46%), Gaps = 53/460 (11%)

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP--NRDVVSWSTMIRG 146
           LGK  H   + +GL+ D YV+N LI MY++CGSL SAR LFD  P  +RD+V+++ ++  
Sbjct: 31  LGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAA 90

Query: 147 Y-HRGGLPE-----EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR 200
           Y H G L +     EA  + R +R   +  +   +  +  L          +A+    V 
Sbjct: 91  YAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAV- 149

Query: 201 NCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
                K+G    V +A AL+++Y+K   +  A+ LF+R+    VV W VM+  Y+     
Sbjct: 150 -----KIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAG 204

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
           +E + LF+      + P  +++ ++++  G                +  FE  L    A 
Sbjct: 205 DEVLGLFSAFHRSGLRPDCVSVRTILMGVG---------------KKTVFERELEQVRAY 249

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
                       A  LF      DV +WN  +S+Y QA    +A + F  M  S+V  + 
Sbjct: 250 ------------ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDS 297

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           +T + +LS+      LE+GK +H  + + G +  V +  + ++MY K G VN A R+F +
Sbjct: 298 LTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQ 357

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
               D+  WN +++G    G  E +L  F+D+ RSG+ P+  T   +L ACS      E 
Sbjct: 358 MKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSS----LEE 413

Query: 497 KSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDEA 532
                + VH      G+V        ++D+  + G ++EA
Sbjct: 414 SYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEA 453



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 105/202 (51%), Gaps = 8/202 (3%)

Query: 291 LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD--GMKSKDVMIWNAVI 348
           L LGK  HA I+ +G      + N L+ MY KC  + SAR LFD      +D++ +NA++
Sbjct: 29  LILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAIL 88

Query: 349 SAYAQA---HCIDK---AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
           +AYA     H ++K   AF +F  ++ S +     T+  L  LC   G+    + L  Y 
Sbjct: 89  AAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYA 148

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
            K GL+ DV +  ALV++YAK   +  A  LF     RD+ +WN MM  Y   G G+E L
Sbjct: 149 VKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVL 208

Query: 463 IFFVDMERSGVKPNGITFIGLL 484
             F    RSG++P+ ++   +L
Sbjct: 209 GLFSAFHRSGLRPDCVSVRTIL 230



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 24/198 (12%)

Query: 7   FLNLEQTRQCHAHIIKTHFKFS-----------------------YTNIINP-LTRYNSL 42
            + L+Q +Q HA +IK  F +                        +  I +P    + ++
Sbjct: 513 LVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTV 572

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           ++  ++N +   AL  Y  MR  G + D +T  T++KAC+ +     GK+IH   +K   
Sbjct: 573 ISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNC 632

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
             D +V  +L+ MY++CG++  A  LF  M  R V  W+ MI G  + G  EEAL    E
Sbjct: 633 AFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNE 692

Query: 163 MRFMDIRPSEVAMISMVS 180
           M+   + P  V  I ++S
Sbjct: 693 MKSRGVTPDRVTFIGVLS 710


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/575 (36%), Positives = 326/575 (56%), Gaps = 38/575 (6%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQ---MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           IH   IK GL    Y  + L++   +      L  A  +FD +    ++ W+TM RG+  
Sbjct: 21  IHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGHAL 80

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
              P  AL++   M  + + P+      ++   A       G+ +H  V++   D  L +
Sbjct: 81  SSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFD--LDL 138

Query: 210 AIATALIDMYSKCGNLAYAKQ-------------------------------LFNRLNQN 238
            I T+LI MY + G L  A++                               +F+ +   
Sbjct: 139 YIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIPVK 198

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
            VVSW   ISGY       E + LF +M++ NV P E T+++++  C   G ++LG+ +H
Sbjct: 199 DVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVH 258

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
           ++I  +GF  +L + NAL+D+Y KC E+ +A  LF G+ +KDV+ WN +I  Y   +   
Sbjct: 259 SWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNLYK 318

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK--QGLEVDVILKTA 416
           +A  LF  M  S  +PN+VTM+ +LS C   GA+++G+W+H YI+K  +G+     L+T+
Sbjct: 319 EALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 378

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           L+DMYAKCGD+  A ++F   + R +  WNAM+ G+ MHG    A   F  M ++G++P+
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPD 438

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
            ITF+GLL+ACSH+G++  G+ +F  M     L+PK+EHYGCM+DL G +GL  EA +MI
Sbjct: 439 DITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMI 498

Query: 537 KSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWN 596
            +M + P+ ++W +LL A K+H N  +GE  A  +++IEP+N G  VL+SNIYA A RWN
Sbjct: 499 NTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAERWN 558

Query: 597 DVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +VA  R ++ +  +KK PG SS+E++ +VH+FI G
Sbjct: 559 EVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 593



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 171/320 (53%), Gaps = 2/320 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +N+ ++ Y +      AL ++  M K     D  T+ T+L ACAQ     LG++
Sbjct: 197 VKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQ 256

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H +   +G   +  + NALI +YS+CG L +A  LF  + N+DV+SW+T+I GY    L
Sbjct: 257 VHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNL 316

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            +EAL + ++M     +P++V M+S++S  A +  +D+G+ IH  + +  K      ++ 
Sbjct: 317 YKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 376

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T+LIDMY+KCG++  A+Q+F+ +   S+ SW  MI G+      N    +F+ M +  + 
Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIE 436

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSART 331
           P +IT + L+  C   G L LG+ +   + R+      L     ++D+ G     + A  
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEK 496

Query: 332 LFDGMK-SKDVMIWNAVISA 350
           + + M+   D +IW +++ A
Sbjct: 497 MINTMEMEPDGVIWCSLLKA 516



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 145/311 (46%), Gaps = 41/311 (13%)

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD---MYGKCREIRSARTLFDG 335
           LSL+  C  +  L++   +HA +++ G   +    + L++   +      +  A ++FD 
Sbjct: 6   LSLLHXCKTLQSLRI---IHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDT 62

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++   ++IWN +   +A +     A +L++ M    + PN  T   LL  C ++ A + G
Sbjct: 63  IQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEG 122

Query: 396 KWLHTYIEKQGLEVDVILKTALVDM-------------------------------YAKC 424
           + LH  + K G ++D+ + T+L+ M                               YA  
Sbjct: 123 QQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASR 182

Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
           G +  A+++F E   +D+  WNA ++GY   G  +EAL  F  M ++ V+P+  T + +L
Sbjct: 183 GXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVL 242

Query: 485 NACSHAGLVTEGKSVFDKM-VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           +AC+ +G +  G+ V   +  HG G   KI     ++DL  + G L+ A  + + +  + 
Sbjct: 243 SACAQSGSIELGRQVHSWINDHGFGXNLKI--VNALIDLYSKCGELETACGLFQGLSNK- 299

Query: 544 NMIVWGALLAA 554
           ++I W  L+  
Sbjct: 300 DVISWNTLIGG 310


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  393 bits (1010), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 213/622 (34%), Positives = 358/622 (57%), Gaps = 17/622 (2%)

Query: 24  HFKFSYTNI-INPLTRYNSLVTSYIKNNKPSSALNIY-AFMRKNGSEVDNFTIPTILKAC 81
           H + ++  I    +  +NS++++Y +     +A++ +  F+  +  + D++T P +++AC
Sbjct: 93  HARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC 152

Query: 82  AQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWS 141
             +     G+++H   +K G + D Y++ + I  YS  G +  A  LFD M  RD+ +W+
Sbjct: 153 GNL---DDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWN 209

Query: 142 TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN 201
            MI G++  G   EALEV  EMRF  +    V + S++ +   + D+  G  IH   +  
Sbjct: 210 AMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAI-- 267

Query: 202 CKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN 257
               KLG+     +  ALI+MY+K G L  A+ +FN++    +VSW  +++ + +  +  
Sbjct: 268 ----KLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPV 323

Query: 258 EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANAL 316
             + ++ +M    V P  +T++SL      +G     + +H ++ R   F   +A+ NA+
Sbjct: 324 IALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAI 383

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV-SKVRPN 375
           +DMY K   I SAR +F+G+  KDV+ WN++I+ Y+Q    ++A +++  M+  S   PN
Sbjct: 384 IDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPN 443

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
           + T V +L+  ++ GAL+ G   H  + K  L  D+ + T LVDMY KCG +  A  LF 
Sbjct: 444 QGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFY 503

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
           E  ++    WNA+++ +G+HG G +A+  F +M+  GVKP+ ITF+ LL+ACSH+GLV E
Sbjct: 504 EVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDE 563

Query: 496 GKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAAS 555
           G+  F  M    G+ P ++HYGCMVDL GRAG L++A   +K+MP+RP++ VWGALL A 
Sbjct: 564 GQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGAC 623

Query: 556 KLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPG 615
           ++H+N  +    +  +L++E +N GY VL+SNIYA    W  V  VR + ++  +KK PG
Sbjct: 624 RIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPG 683

Query: 616 FSSVEVNGLVHKFIRGGMVNWK 637
           +SS+EV+  +  F  G   + K
Sbjct: 684 WSSIEVDKKIDVFYTGNQTHPK 705



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 251/488 (51%), Gaps = 19/488 (3%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           I   C +V   HL K++H   + +G     ++S  LI  Y+  G +  AR  FD++  +D
Sbjct: 49  IFLYCTKV---HLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKD 105

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           V +W++MI  Y R G    A++   E  F+     +    +   +     ++D G+ +H 
Sbjct: 106 VYTWNSMISAYARIGHFHAAVDCFNE--FLSTSFLQSDHYTFPPVIRACGNLDDGRKVHC 163

Query: 197 CVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
            V+      KLG    V IA + I  YS+ G ++ A  LF+ +    + +W  MISG+  
Sbjct: 164 LVL------KLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYL 217

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
             ++ E + +F EM  ++V    +TI SL+  C  +  +  G  +H Y ++ G EF L +
Sbjct: 218 NGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFV 277

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
            NAL++MY K  E+RSA T+F+ MK +D++ WN++++A+ Q      A  ++  M    V
Sbjct: 278 CNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGV 337

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV-DVILKTALVDMYAKCGDVNGAY 431
            P+ +T+V L S+  E G     + +H ++ ++   + D+ L  A++DMYAK G ++ A 
Sbjct: 338 VPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSAR 397

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME-RSGVKPNGITFIGLLNACSHA 490
           ++F     +D+  WN+++ GY  +G   EA+  +  M   SG  PN  T++ +L A S  
Sbjct: 398 KVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQL 457

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           G + +G     +++    L   I    C+VD+ G+ G L +A  +   +P + + + W A
Sbjct: 458 GALKQGMKAHGQLIKNF-LYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSS-VSWNA 515

Query: 551 LLAASKLH 558
           +++   LH
Sbjct: 516 IISCHGLH 523



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 141/274 (51%), Gaps = 10/274 (3%)

Query: 291 LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
           + L K LHA ++ +G   S+ ++  L++ Y    +I  AR  FD +++KDV  WN++ISA
Sbjct: 56  VHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISA 115

Query: 351 YAQAHCIDKAFELFIH-MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
           YA+      A + F   +  S ++ +  T   ++  C   G L+ G+ +H  + K G E 
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFEC 172

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           DV +  + +  Y++ G V+ A  LF   + RDI  WNAM++G+ ++G   EAL  F +M 
Sbjct: 173 DVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMR 232

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC--MVDLLGRAG 527
              V  + +T   LL  C     +  G  +    V+ + L  + + + C  ++++  + G
Sbjct: 233 FKSVSMDSVTISSLLPICVQLDDIISGVLI---HVYAIKLGLEFDLFVCNALINMYAKFG 289

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
            L  A  +   M +R +++ W +LLAA + +K P
Sbjct: 290 ELRSAETIFNQMKVR-DIVSWNSLLAAFEQNKKP 322


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/590 (33%), Positives = 351/590 (59%), Gaps = 4/590 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++  ++N     AL+++  M++    ++++T   +L+ C ++   +LG+E+H   +
Sbjct: 234 WNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALL 293

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G + +    NAL+ MY++CG + SA  +F E+  +D +SW++M+  Y + GL  EA+E
Sbjct: 294 KSGSEVNIQC-NALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIE 352

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
            + EM     +P    ++S+ S    +  +  GK +HA  ++   D      +   L+DM
Sbjct: 353 FISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSD--TQVGNTLMDM 410

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC  + Y+  +F+R+     +SWT +I+ Y + +   E + +F E  +E +    + I
Sbjct: 411 YMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMI 470

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  + L K LH Y +RNG    L + N ++D+YG+C E+  +  +F+ ++ 
Sbjct: 471 GSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQ 529

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD++ W ++I+ YA +  +++A  LF  M+ + V+P+ V +V +L       +L  GK +
Sbjct: 530 KDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEV 589

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ ++   ++  + ++LVDMY+ CG ++GA ++F+    +D+ +W AM+   GMHG G
Sbjct: 590 HGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHG 649

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           ++A+  F  M ++GV P+ ++F+ LL ACSH+ LV EGK   D M+    L P  EHY C
Sbjct: 650 KQAIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGKCYLDMMMSTYRLEPWQEHYAC 709

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VDLLGR+G  +EA+E IKSMPL+P  +VW +LL A ++HKN  +  +AA ++LE+EP N
Sbjct: 710 VVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCSLLGACRVHKNHELAVVAANRLLELEPDN 769

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            G  VL+SN++A   +WN+   VR  + E  ++K+P  S +E+   VH F
Sbjct: 770 PGNYVLVSNVFAEMGKWNNAKEVRARISERGLRKDPACSWIEIGNNVHTF 819



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 154/529 (29%), Positives = 286/529 (54%), Gaps = 20/529 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMR---KNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +N+L+ +Y+ +     AL +Y  MR    +G   D  T+ ++LKA         G E+HG
Sbjct: 129 WNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHG 188

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN-RDVVSWSTMIRGYHRGGLPE 154
            A+K+GLD   +V+NALI MY++CG L SA  +F+ M + RDV SW++MI G  + G+  
Sbjct: 189 LAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFL 248

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           +AL++ R M+   +  +    + ++ +  ++A ++LG+ +HA ++++  +  +      A
Sbjct: 249 QALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQ---CNA 305

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+ MY+KCG +  A ++F  +++   +SW  M+S Y++     E +   +EM+     P 
Sbjct: 306 LLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPD 365

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
              I+SL    G +G L  GK +HAY ++   +    + N L+DMY KCR I  +  +FD
Sbjct: 366 HACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFD 425

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M+ KD + W  +I+ YAQ+    +A E+F   +   ++ + + +  +L  C+    + +
Sbjct: 426 RMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILL 485

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
            K LH Y  + GL +D+++K  ++D+Y +CG+V  + ++F     +DI  W +M+  Y  
Sbjct: 486 AKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYAN 544

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
            G   EAL+ F +M+ + V+P+ +  + +L A      + +GK      VHG  L+ +  
Sbjct: 545 SGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKE-----VHGF-LIRRNF 598

Query: 515 H-----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           H        +VD+    G L  A ++  ++  + +M++W A++ A+ +H
Sbjct: 599 HMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCK-DMVLWTAMINATGMH 646



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 147/511 (28%), Positives = 243/511 (47%), Gaps = 26/511 (5%)

Query: 79  KACAQVLMTHLGKEIHGFAIKNG-LDGD-AYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           KA AQ      G ++H  A+  G L+GD  +++  L+ MY +CG +  AR LFD M +R 
Sbjct: 72  KAVAQ------GVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSSRT 125

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRF---MDIRPSEVAMISMVSLFADVADVDLGKA 193
           V SW+ +I  Y   G   EAL V R MR      + P    + S++       D   G  
Sbjct: 126 VFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCGCE 185

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ-NSVVSWTVMISGYIR 252
           +H   V++  D      +A ALI MY+KCG L  A ++F  ++    V SW  MISG ++
Sbjct: 186 VHGLAVKHGLDRS--TFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQ 243

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
                + + LF  M    +  +  T + ++  C  +  L LG+ LHA +L++G E ++  
Sbjct: 244 NGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNI-Q 302

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
            NAL+ MY KC  + SA  +F  +  KD + WN+++S Y Q     +A E    M     
Sbjct: 303 CNALLVMYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGF 362

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR 432
           +P+   +V L S     G L  GK +H Y  KQ L+ D  +   L+DMY KC  +  +  
Sbjct: 363 QPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAH 422

Query: 433 LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL 492
           +F     +D   W  ++  Y       EAL  F + ++ G+K + +    +L ACS    
Sbjct: 423 VFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSILEACSGLET 482

Query: 493 VTEGKSVFDKMVHG--LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           +   K +    +    L LV K      ++D+ G  G +  + +M +++  + +++ W +
Sbjct: 483 ILLAKQLHCYAIRNGLLDLVVKNR----IIDIYGECGEVYHSLKMFETVE-QKDIVTWTS 537

Query: 551 LL---AASKLHKNPSMGEIAATQILEIEPQN 578
           ++   A S L  N ++   A  Q  +++P +
Sbjct: 538 MINCYANSGL-LNEALVLFAEMQSTDVQPDS 567



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 167/326 (51%), Gaps = 5/326 (1%)

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
           ++ L A    V  G  +HA  V     E     +AT L+ MY KCG +A A+ LF+ ++ 
Sbjct: 64  VLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSS 123

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEM---IEENVFPSEITILSLIIECGFVGGLQLG 294
            +V SW  +I  Y+      E + ++  M       V P   T+ S++   G  G  + G
Sbjct: 124 RTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGVEGDGRCG 183

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS-KDVMIWNAVISAYAQ 353
             +H   +++G + S  +ANAL+ MY KC  + SA  +F+ M   +DV  WN++IS   Q
Sbjct: 184 CEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAMRVFELMHDGRDVASWNSMISGCLQ 243

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
                +A +LF  M+ + +  N  T VG+L +CTE   L +G+ LH  + K G EV++  
Sbjct: 244 NGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLKSGSEVNIQC 303

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
              LV MY KCG V+ A R+F E   +D   WN+M++ Y  +G   EA+ F  +M R G 
Sbjct: 304 NALLV-MYTKCGRVDSALRVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGF 362

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSV 499
           +P+    + L +A  H G +  GK V
Sbjct: 363 QPDHACIVSLSSAVGHLGWLLNGKEV 388



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 81/157 (51%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + S++  Y  +   + AL ++A M+    + D+  + +IL A   +     GKE+HG
Sbjct: 532 IVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKGKEVHG 591

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F I+     +  + ++L+ MYS CGSL  A  +F+ +  +D+V W+ MI      G  ++
Sbjct: 592 FLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTAMINATGMHGHGKQ 651

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           A+++ + M    + P  V+ ++++   +    V+ GK
Sbjct: 652 AIDLFKRMLQTGVTPDHVSFLALLYACSHSKLVNEGK 688


>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 210/611 (34%), Positives = 343/611 (56%), Gaps = 7/611 (1%)

Query: 21  IKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA 80
           + +H  FS   ++  +  +N+++T ++     + AL +Y+ M   G + D  T+  +++A
Sbjct: 213 VLSHRVFSLM-LVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQA 271

Query: 81  CAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSW 140
           CA+     LG ++H  AIK  L  D ++ NAL+ MYS+ GSL S+  LF+ +P  D   W
Sbjct: 272 CAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALW 331

Query: 141 STMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL-GKAIHACVV 199
           ++MI  Y   G   EA+ +  +MR   I+     +  M+SL  D+ D  + G+ +HA  +
Sbjct: 332 NSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAM 391

Query: 200 RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
           ++    +L   +  AL+ MY K   +  A+ +F ++    V+SW  MIS + +     + 
Sbjct: 392 KS--GIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKA 449

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
             LF  M E  +  +  TI+SL+  C     L  G+ +H + ++NG E + ++  +L +M
Sbjct: 450 FELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEM 509

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
           Y  C + R+A  +F     +D++ WN++IS+Y +     KA  LF HM +S++ PN VT+
Sbjct: 510 YINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHM-ISELEPNSVTI 568

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQ--GLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
           + +L+ CT+   L +G+ LH Y  ++   LE+D  L  A + MYA+CG +  A ++F   
Sbjct: 569 INILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTL 628

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
             R I  WNAM+ GYGMHG G +A + F  M   G KPN ++F  +L+ACSH+GL   G 
Sbjct: 629 QTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGL 688

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
            +F  MV   G+ P++ HYGCMVDLLGR G   EA   I SMP+ P+  +W ALL++ ++
Sbjct: 689 QLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQI 748

Query: 558 HKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
             N  + E    +++E+EP N G  +L+SNIYA A  W++V  +R+ ++E  + K PG S
Sbjct: 749 KSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTS 808

Query: 618 SVEVNGLVHKF 628
            + +   VH F
Sbjct: 809 WIVIGNQVHHF 819



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 150/557 (26%), Positives = 273/557 (49%), Gaps = 18/557 (3%)

Query: 30  TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL 89
           T+++N    +NS++  + K     + L+ Y  M   G   D+ T+P +LKAC ++     
Sbjct: 19  THLVNVSKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGN 78

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G  IH F     L  D  V  AL+  Y +CG +  A  +F EMP RD+VSW+ +I GY  
Sbjct: 79  GVRIHSFIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVG 138

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
               +EA+ +  EM+   + P+   +++++    ++ ++ LG+ IH   +RN   + +  
Sbjct: 139 CLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFD-MDA 197

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            + TAL+  Y +  +   + ++F+ +   ++VSW  +I+G++   +  + ++L++ M+ E
Sbjct: 198 YVGTALVGFYMRF-DAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIE 256

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            +    +T+L +I  C   G L+LG  LH   ++      L + NAL++MY     + S+
Sbjct: 257 GIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESS 316

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             LF+ + + D  +WN++IS+Y       +A  LFI M++ +++ +  T+  +LSLC + 
Sbjct: 317 WALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDL 376

Query: 390 GALEM-GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
               + G+ LH +  K G+E+D  L  AL+ MY K   +  A  +F +    D+  WN M
Sbjct: 377 NDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTM 436

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL- 507
           ++ +       +A   F+ M  S +K N  T + LL  C           VF + +HG  
Sbjct: 437 ISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDG-----SDLVFGRSIHGFA 491

Query: 508 ---GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
              GL         + ++    G    A  M    P R +++ W +L+  S   KN + G
Sbjct: 492 IKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQR-DLVSWNSLI--SSYIKNDNAG 548

Query: 565 E---IAATQILEIEPQN 578
           +   +    I E+EP +
Sbjct: 549 KALLLFNHMISELEPNS 565


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 212/594 (35%), Positives = 343/594 (57%), Gaps = 3/594 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +NS++++Y  N +   AL ++  M+K     + +T    L+AC        G  IH 
Sbjct: 283 VVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHA 342

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K+    + +V+NALI MY+  G +  A  +F  M + D +SW++M+ G+ + GL  E
Sbjct: 343 TVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHE 402

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL+   EMR    +P  VA+IS+++  A   +   G  IHA  ++N  D  L V    +L
Sbjct: 403 ALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVG--NSL 460

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+K  ++ Y   +F+++    VVSWT +I+G+ +    +  + LF E+  E +    
Sbjct: 461 VDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDV 520

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           + I S+++ C  +  +   K +H+YI+R G    L + N +VD+YG+C  +  A  +F+ 
Sbjct: 521 MMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFEL 579

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++ KDV+ W ++IS Y      ++A ELF  MK + V P+ +++V +LS      AL+ G
Sbjct: 580 IEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKG 639

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           K +H ++ ++G  ++  L + LVDMYA+CG +  +  +F+    +D+ +W +M+  YGMH
Sbjct: 640 KEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMH 699

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           GCG  A+  F  ME   + P+ I F+ +L ACSH+GL+ EG+   + M +   L P  EH
Sbjct: 700 GCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEH 759

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y C+VDLLGRA  L+EA++ +K M + P   VW ALL A ++H N  +GEIAA ++LE++
Sbjct: 760 YVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEIAAQKLLEMD 819

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           P+N G  VL+SN+YA   RW DV  VR  MK   +KK PG S +EV   VH F+
Sbjct: 820 PENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGNKVHTFM 873



 Score =  282 bits (721), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 156/521 (29%), Positives = 288/521 (55%), Gaps = 6/521 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++ +Y+ N +P  +L +Y  MR +G  +D  T P ILKAC  +     G E+HG AI
Sbjct: 184 WNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAI 243

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR-DVVSWSTMIRGYHRGGLPEEAL 157
           K G     +V+N+++ MY++C  L  AR LFD MP + DVVSW++MI  Y   G   EAL
Sbjct: 244 KEGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNGQSIEAL 303

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            +  EM+   + P+    ++ +    D + +  G  IHA V+++     + V +A ALI 
Sbjct: 304 RLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKS--SYYINVFVANALIA 361

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY++ G +  A  +F  ++    +SW  M+SG+++    +E ++ + EM +    P  + 
Sbjct: 362 MYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQKPDLVA 421

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++S+I      G    G  +HAY ++NG +  L + N+LVDMY K   ++    +FD M 
Sbjct: 422 VISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMP 481

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KDV+ W  +I+ +AQ     +A ELF  +++  +  + + +  +L  C+    +   K 
Sbjct: 482 DKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKE 541

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H+YI ++GL  D++L+  +VD+Y +CG+V+ A R+F    ++D+  W +M++ Y  +G 
Sbjct: 542 IHSYIIRKGLS-DLVLQNGIVDVYGECGNVDYAARMFELIEFKDVVSWTSMISCYVHNGL 600

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
             EAL  F  M+ +GV+P+ I+ + +L+A +    + +GK +   ++   G V +     
Sbjct: 601 ANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRK-GFVLEGSLAS 659

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            +VD+  R G L+++  +   +  + ++++W +++ A  +H
Sbjct: 660 TLVDMYARCGTLEKSRNVFNFIRNK-DLVLWTSMINAYGMH 699



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 247/480 (51%), Gaps = 7/480 (1%)

Query: 76  TILKACAQVLMTHLGKEIHGFAI-KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN 134
           ++L+ C        G+++H   I  N L    ++S  L+ MY +CG LV A  LFD MP+
Sbjct: 119 SVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLVDAEKLFDGMPH 178

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           + + +W+ MI  Y   G P  +LE+ REMR   I         ++     + D   G  +
Sbjct: 179 KTIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEV 238

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL-NQNSVVSWTVMISGYIRC 253
           H   ++  +     V +A +++ MY+KC +L  A+QLF+R+  +  VVSW  MIS Y   
Sbjct: 239 HGLAIK--EGYVSIVFVANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSN 296

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
            +  E +RLF EM + ++ P+  T ++ +  C     ++ G ++HA +L++ +  ++ +A
Sbjct: 297 GQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVA 356

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           NAL+ MY +  ++  A  +F  M   D + WN+++S + Q     +A + +  M+ +  +
Sbjct: 357 NALIAMYARFGKMGEAANIFYNMDDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDAGQK 416

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           P+ V ++ +++    +G    G  +H Y  K GL+ D+ +  +LVDMYAK   +     +
Sbjct: 417 PDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCI 476

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F +   +D+  W  ++AG+  +G    AL  F +++  G+  + +    +L ACS   L+
Sbjct: 477 FDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLI 536

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           +  K +   ++   GL   +   G +VD+ G  G +D A  M + +  + +++ W ++++
Sbjct: 537 SSVKEIHSYIIRK-GLSDLVLQNG-IVDVYGECGNVDYAARMFELIEFK-DVVSWTSMIS 593


>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 847

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 210/611 (34%), Positives = 343/611 (56%), Gaps = 7/611 (1%)

Query: 21  IKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA 80
           + +H  FS   ++  +  +N+++T ++     + AL +Y+ M   G + D  T+  +++A
Sbjct: 213 VLSHRVFSLM-LVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIEGIKFDAVTMLVVIQA 271

Query: 81  CAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSW 140
           CA+     LG ++H  AIK  L  D ++ NAL+ MYS+ GSL S+  LF+ +P  D   W
Sbjct: 272 CAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPTSDAALW 331

Query: 141 STMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL-GKAIHACVV 199
           ++MI  Y   G   EA+ +  +MR   I+     +  M+SL  D+ D  + G+ +HA  +
Sbjct: 332 NSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWGRGLHAHAM 391

Query: 200 RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
           ++    +L   +  AL+ MY K   +  A+ +F ++    V+SW  MIS + +     + 
Sbjct: 392 KS--GIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSMFRAKA 449

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
             LF  M E  +  +  TI+SL+  C     L  G+ +H + ++NG E + ++  +L +M
Sbjct: 450 FELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNTSLTEM 509

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
           Y  C + R+A  +F     +D++ WN++IS+Y +     KA  LF HM +S++ PN VT+
Sbjct: 510 YINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHM-ISELEPNSVTI 568

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQ--GLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
           + +L+ CT+   L +G+ LH Y  ++   LE+D  L  A + MYA+CG +  A ++F   
Sbjct: 569 INILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEKIFCTL 628

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
             R I  WNAM+ GYGMHG G +A + F  M   G KPN ++F  +L+ACSH+GL   G 
Sbjct: 629 QTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGLTVTGL 688

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
            +F  MV   G+ P++ HYGCMVDLLGR G   EA   I SMP+ P+  +W ALL++ ++
Sbjct: 689 QLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALLSSCQI 748

Query: 558 HKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
             N  + E    +++E+EP N G  +L+SNIYA A  W++V  +R+ ++E  + K PG S
Sbjct: 749 KSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGKPPGTS 808

Query: 618 SVEVNGLVHKF 628
            + +   VH F
Sbjct: 809 WIVIGNQVHHF 819



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 149/557 (26%), Positives = 272/557 (48%), Gaps = 18/557 (3%)

Query: 30  TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL 89
           T+++N    +NS++  + K     + L+ Y  M   G   D+ T+P +LKAC ++     
Sbjct: 19  THLVNVSKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACGRLNAIGN 78

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G  IH       L  D  V  AL+  Y +CG +  A  +F EMP RD+VSW+ +I GY  
Sbjct: 79  GVRIHSCIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWNALISGYVG 138

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
               +EA+ +  EM+   + P+   +++++    ++ ++ LG+ IH   +RN   + +  
Sbjct: 139 CLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRNGLFD-MDA 197

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            + TAL+  Y +  +   + ++F+ +   ++VSW  +I+G++   +  + ++L++ M+ E
Sbjct: 198 YVGTALVGFYMRF-DAVLSHRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKLYSSMLIE 256

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            +    +T+L +I  C   G L+LG  LH   ++      L + NAL++MY     + S+
Sbjct: 257 GIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESS 316

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             LF+ + + D  +WN++IS+Y       +A  LFI M++ +++ +  T+  +LSLC + 
Sbjct: 317 WALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDL 376

Query: 390 GALEM-GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
               + G+ LH +  K G+E+D  L  AL+ MY K   +  A  +F +    D+  WN M
Sbjct: 377 NDGSIWGRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTM 436

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL- 507
           ++ +       +A   F+ M  S +K N  T + LL  C           VF + +HG  
Sbjct: 437 ISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDG-----SDLVFGRSIHGFA 491

Query: 508 ---GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
              GL         + ++    G    A  M    P R +++ W +L+  S   KN + G
Sbjct: 492 IKNGLEINTSLNTSLTEMYINCGDERAATNMFTRCPQR-DLVSWNSLI--SSYIKNDNAG 548

Query: 565 E---IAATQILEIEPQN 578
           +   +    I E+EP +
Sbjct: 549 KALLLFNHMISELEPNS 565


>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 815

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/591 (34%), Positives = 336/591 (56%), Gaps = 3/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+  Y ++      + I   +  +G E+  +T+PT+LK C ++ +   G+ +H   I
Sbjct: 220 WNALLNGYARHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVI 279

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+ D  +++ L++MYS C S   A  +F  +   DVV  S MI  + R  +  EAL+
Sbjct: 280 KRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALD 339

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M  M ++P+    + +  + +   D +L +++HA +V++      GV    A+++M
Sbjct: 340 LFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVG--DAILNM 397

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y K G +  A   F+ +++    SW  ++S +   +   +G+R+F +M  E    ++ T 
Sbjct: 398 YVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTY 457

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +S++  C  +  L+ G  +HA IL++G +    ++  LVDMY +     SA  +F+ +K 
Sbjct: 458 VSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKE 517

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +D   W  ++S YA+    +K  E F  M    +RP++ T+   LS+C++  +L  G  L
Sbjct: 518 RDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQL 577

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H++  K G    V+   ALVDMY KCG++  A  LF E+  RD   WN ++ GY  HG G
Sbjct: 578 HSWAIKSGWNSSVV-SGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHG 636

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            +AL  F  M   G +P+GITF+G+L+ACSHAGL+ EG+  F  +    G+ P +EHY C
Sbjct: 637 YKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTMEHYAC 696

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVD+L +AG L EA  +I  MPL P+  +W  +L A ++H+N  + E AA ++ E+EP +
Sbjct: 697 MVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFELEPHD 756

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
              ++L+SNIYA   RW+DV  VR ++ +  VKKEPG S +E+NG +H F+
Sbjct: 757 ASSSILLSNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWIEINGQIHMFL 807



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 131/521 (25%), Positives = 250/521 (47%), Gaps = 7/521 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + ++++++        AL+++A M + G   + FT+ ++LKAC+    +    ++HG  +
Sbjct: 119 WTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVV 178

Query: 99  K-NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           K NGLD D YV ++L++ Y+ CG L +A  +   +P R  VSW+ ++ GY R G     +
Sbjct: 179 KLNGLD-DPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVM 237

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            ++ ++       S+  + +++    ++     G+++HA V++  +  +    + + L++
Sbjct: 238 IIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIK--RGLETDNVLNSCLVE 295

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYS+C +   A ++F R+++  VV  + MIS + R +   E + LF +M    V P+   
Sbjct: 296 MYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYI 355

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
            + +       G   L + +HAYI+++GF     + +A+++MY K   ++ A   FD + 
Sbjct: 356 FVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIH 415

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
             D   WN ++SA+      ++   +F  M       N+ T V +L  CT    L  G  
Sbjct: 416 EPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQ 475

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H  I K GL+ D  +   LVDMYA+ G    A  +F +   RD   W  +M+GY     
Sbjct: 476 VHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTVIMSGYAKTEE 535

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            E+ + +F  M R  ++P+  T    L+ CS    +  G  +    +   G    +   G
Sbjct: 536 AEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHSWAIKS-GWNSSVVS-G 593

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            +VD+  + G + +A  +      R + + W  ++     H
Sbjct: 594 ALVDMYVKCGNIADAEMLFHESETR-DQVAWNTIICGYSQH 633



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 205/412 (49%), Gaps = 4/412 (0%)

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
           L+ CA       G+E+H   +++ L  D ++ ++L+ MY +CG LV AR +FD MP+RD+
Sbjct: 57  LQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFDGMPHRDI 116

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
           V+W+ MI  +   G  ++AL++   M    I P+   + S++   +  +       +H  
Sbjct: 117 VAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQ 176

Query: 198 VVR-NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
           VV+ N  D+     + ++L++ Y+ CG L  A+ +   L + S VSW  +++GY R  + 
Sbjct: 177 VVKLNGLDDPY---VGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDY 233

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
              + +  +++      S+ T+ +++  C  +G  + G+ +HA +++ G E    + + L
Sbjct: 234 RRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCL 293

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           V+MY +C     A  +F  +   DV+  +A+IS + +     +A +LF+ M    V+PN 
Sbjct: 294 VEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNH 353

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
              VG+  + +  G   + + +H YI K G  +   +  A+++MY K G V  A   F  
Sbjct: 354 YIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDL 413

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
               D   WN +++ +      E+ L  F  M   G   N  T++ +L  C+
Sbjct: 414 IHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCT 465


>gi|413923618|gb|AFW63550.1| hypothetical protein ZEAMMB73_399779 [Zea mays]
          Length = 1118

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 214/597 (35%), Positives = 340/597 (56%), Gaps = 8/597 (1%)

Query: 29   YTNIINPLTRY-NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
            +  I +P  R  N+L+ ++I+  +  +A+ +   +R      D FT+  +L+AC  +   
Sbjct: 526  FDEIRSPTPRLANALLRAHIRARQWRAAILLGQRLR---VRRDGFTLSLLLRACTALPSL 582

Query: 88   HLGKEIHGFAIKN-GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
              G+ +H  A+++     DA+V+ A++QMYS CG +  A   +  +   D+V  ++++ G
Sbjct: 583  THGRAVHAAAVRSCTASEDAFVATAIVQMYSRCGDMAGAINAYGMLEKPDIVLRTSVVTG 642

Query: 147  YHRGGLPEEALEVM-REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
            Y + G+ EEALE   R +    +  + V ++S++S  A +  V  G+A HA VVRN    
Sbjct: 643  YEQNGMAEEALEFFARNVVGQGVLVTPVTLVSVMSAAAQLGHVRKGQACHAYVVRNSLSY 702

Query: 206  KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
             L  A+  A++  Y K G+L  + +LF  +    V++W+ MI GY++  + + G R++ E
Sbjct: 703  DL--ALVNAVLGFYVKIGDLQASMRLFEGMTDRDVITWSCMIKGYVQHGDAHTGFRMYRE 760

Query: 266  MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
            M++  V P+ +T++S++  C  V   + GK LH   +  G E  L +A ALVDMY KC  
Sbjct: 761  MVKARVQPNSVTLVSVLQACALVVDAEEGKRLHRVAVSIGCELELGVATALVDMYMKCSC 820

Query: 326  IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
               A  LF  M  KDV+ W AVI    Q     ++   F  M ++   P+ VTMV +L+ 
Sbjct: 821  HEEAMRLFHRMPKKDVVAWAAVIGGLTQNELPGESLHSFKCMLLNDHVPDAVTMVKVLAA 880

Query: 386  CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
            C+E G   +   LH Y+ + G   +  +  AL+D+Y+KCGD++ A R+F     +DI +W
Sbjct: 881  CSEFGGNRLAICLHGYLVRNGFNNNAFVAAALLDLYSKCGDLDSAVRVFEGTTEKDIVVW 940

Query: 446  NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
             +M+AGYG HG G+EA+  +  M  S ++PN +TF+ +L+ACSH+GLV EG  +FD M  
Sbjct: 941  GSMIAGYGAHGLGQEAVALYQRMIASSIQPNNVTFLSVLSACSHSGLVQEGIQIFDSMTQ 1000

Query: 506  GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
              G+VP  EH   MVDLLGRAG L EA  +I+ M  R     W ALLAA + H N  M E
Sbjct: 1001 VFGVVPNAEHQSAMVDLLGRAGELQEAIRVIRDMDGRAVAHTWCALLAACRKHNNTKMSE 1060

Query: 566  IAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
            +AA  +L+++P + GY  L++N+YA   +W +V   R ++K   ++K  G+SSVEV 
Sbjct: 1061 VAAKNLLKLDPDHVGYYNLLTNLYAFDEKWENVKDTRDMVKGRDLRKVAGYSSVEVT 1117



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 8/204 (3%)

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           LHA ILR+G   S   ++ L      C     AR LFD ++S    + NA++ A+ +A  
Sbjct: 493 LHANILRSGLLHS---SHHLTAHVLACYPPGLARDLFDEIRSPTPRLANALLRAHIRARQ 549

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH-TYIEKQGLEVDVILKT 415
              A  L   +   +VR +  T+  LL  CT   +L  G+ +H   +       D  + T
Sbjct: 550 WRAAILLGQRL---RVRRDGFTLSLLLRACTALPSLTHGRAVHAAAVRSCTASEDAFVAT 606

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV-DMERSGVK 474
           A+V MY++CGD+ GA   +      DI +  +++ GY  +G  EEAL FF  ++   GV 
Sbjct: 607 AIVQMYSRCGDMAGAINAYGMLEKPDIVLRTSVVTGYEQNGMAEEALEFFARNVVGQGVL 666

Query: 475 PNGITFIGLLNACSHAGLVTEGKS 498
              +T + +++A +  G V +G++
Sbjct: 667 VTPVTLVSVMSAAAQLGHVRKGQA 690


>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 754

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/602 (34%), Positives = 350/602 (58%), Gaps = 5/602 (0%)

Query: 18  AHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTI 77
            H+      FS   + + +T + +L+  Y++NN+    L     M + G   +  TI + 
Sbjct: 158 GHVESASIMFSEITVKDVVT-WTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSG 216

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
            +AC  +     GK +HG A+KNG      V + ++ MYS CGS   A   F ++  +D+
Sbjct: 217 FQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDL 276

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
           +SW+++I  + + GL  E L +  EM+  +I P E+ +  M+  F +   +  GKA HA 
Sbjct: 277 ISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHAR 336

Query: 198 VVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN 257
           +++ C    L      AL+ MY K G+L  A ++F+  +++S   W+ MI GY    +  
Sbjct: 337 ILKQCC--ALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSE-DWSTMILGYSNMGQKE 393

Query: 258 EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALV 317
           + +    EM+     P   +++S+I  C  VG + +G+ +H Y ++N    ++++AN+L+
Sbjct: 394 KCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLM 453

Query: 318 DMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEV 377
           DMYGK   + +   +F     +DV+ WN +IS+Y Q+  + +A  LF  M   KV PN+V
Sbjct: 454 DMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKV 513

Query: 378 TMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
           T + +LS C    +L+ G+ +H YI++ G E ++ ++TAL+DMYAKCG++  + +LF+  
Sbjct: 514 TCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNST 573

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
             RD+ +WN M++ YGMHG  E A+  F  ME S +KPN  TF+ LL+AC+H G V EG+
Sbjct: 574 EERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGR 633

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
            +FD+M    G+ P ++HY  ++DLLGR+G L+ A  ++ SMP+ P+  VWG+LL+A K+
Sbjct: 634 HLFDRM-QKYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKI 692

Query: 558 HKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
           H    +G   A   +E +P+N GY +++S++Y+   RW++V  VR +MK+  V+K  G+S
Sbjct: 693 HNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMMKKRGVEKRAGWS 752

Query: 618 SV 619
           ++
Sbjct: 753 AL 754



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 147/524 (28%), Positives = 268/524 (51%), Gaps = 12/524 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++ S+  N     A + Y  MR + S  + FT+P ++  CA+++M + G  IHG   
Sbjct: 76  WNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTS 135

Query: 99  KNGLD-GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           K GL  G++ + ++ I MYS+CG + SA  +F E+  +DVV+W+ +I GY +       L
Sbjct: 136 KLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGL 195

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN---CKDEKLGVAIATA 214
           + + EM  +   P+   + S      D+  +  GK +H   ++N   C +      + + 
Sbjct: 196 KCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFE-----VVKST 250

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           ++ MYS+CG+   A + F +L+Q  ++SWT +I+ + +   ++E + LF EM    + P 
Sbjct: 251 ILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPD 310

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           EI I  +++  G    +  GK  HA IL+     S    NAL+ MY K   + +A  +F 
Sbjct: 311 EIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFH 370

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
               K    W+ +I  Y+     +K       M +    P+  ++V ++S C++ GA+ +
Sbjct: 371 SFH-KSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINI 429

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G+ +H Y  K  +  +V +  +L+DMY K G V   +R+F   + RD+  WN +++ Y  
Sbjct: 430 GRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQ 489

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
            G   EA+I F  M +  V PN +T I +L+AC+H   + EG+ +  + +   G    I 
Sbjct: 490 SGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASLDEGEKI-HQYIKENGFESNIT 548

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
               ++D+  + G L+ + ++  S   R ++I+W  +++   +H
Sbjct: 549 IRTALIDMYAKCGELETSRKLFNSTEER-DVILWNVMISNYGMH 591



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 117/469 (24%), Positives = 225/469 (47%), Gaps = 14/469 (2%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
            H   I  G   + + +  L+  Y+       + +LF  + ++D+  W+++I+ +   G 
Sbjct: 29  FHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGD 88

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV--- 209
            + A +   +MR     P++  +  +VS  A++   + G  IH          KLG+   
Sbjct: 89  YQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLT------SKLGLFVG 142

Query: 210 --AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
             AI ++ I MYSKCG++  A  +F+ +    VV+WT +I GY++ NE   G++   EM 
Sbjct: 143 NSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMH 202

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
                P+  TI S    C  +  L  GK LH   L+NGF     + + ++ MY +C    
Sbjct: 203 RIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPE 262

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            A   F  +  KD++ W ++I+ +++   + +   LF  M+ S++ P+E+ +  +L    
Sbjct: 263 EAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFG 322

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
            +  +  GK  H  I KQ   +  I   AL+ MY K G +  A ++F  + ++    W+ 
Sbjct: 323 NSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIF-HSFHKSSEDWST 381

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           M+ GY   G  E+ + F  +M   G +P+  + + ++++CS  G +  G+S+    +   
Sbjct: 382 MILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKN- 440

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
            ++  +     ++D+ G++G +  A   I    L+ ++I W  L+++ K
Sbjct: 441 SIIENVSVANSLMDMYGKSGHVT-ATWRIFHRTLQRDVISWNTLISSYK 488



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 122/263 (46%), Gaps = 11/263 (4%)

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
           W H+ I+  G   ++  A  L+  Y   R+   +  LF  + SKD+ +WN++I ++    
Sbjct: 28  WFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNG 87

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV-DVILK 414
              +AF+ ++ M+ S   PN+ T+  ++S C E      G  +H    K GL V +  + 
Sbjct: 88  DYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIG 147

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
           ++ + MY+KCG V  A  +FSE   +D+  W A++ GY  +      L    +M R G  
Sbjct: 148 SSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGT 207

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLD 530
           PN  T      AC     + EGK      +HGL L      +      ++ +  R G  +
Sbjct: 208 PNYKTIGSGFQACVDLDALVEGKC-----LHGLALKNGFLCFEVVKSTILSMYSRCGSPE 262

Query: 531 EAHEMIKSMPLRPNMIVWGALLA 553
           EA+     +  + ++I W +++A
Sbjct: 263 EAYRCFCKLD-QKDLISWTSIIA 284


>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 784

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/602 (34%), Positives = 350/602 (58%), Gaps = 5/602 (0%)

Query: 18  AHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTI 77
            H+      FS   + + +T + +L+  Y++NN+    L     M + G   +  TI + 
Sbjct: 188 GHVESASIMFSEITVKDVVT-WTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSG 246

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
            +AC  +     GK +HG A+KNG      V + ++ MYS CGS   A   F ++  +D+
Sbjct: 247 FQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDL 306

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
           +SW+++I  + + GL  E L +  EM+  +I P E+ +  M+  F +   +  GKA HA 
Sbjct: 307 ISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHAR 366

Query: 198 VVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN 257
           +++ C    L      AL+ MY K G+L  A ++F+  +++S   W+ MI GY    +  
Sbjct: 367 ILKQCC--ALSGITHNALLSMYCKFGHLGTANKIFHSFHKSSE-DWSTMILGYSNMGQKE 423

Query: 258 EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALV 317
           + +    EM+     P   +++S+I  C  VG + +G+ +H Y ++N    ++++AN+L+
Sbjct: 424 KCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLM 483

Query: 318 DMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEV 377
           DMYGK   + +   +F     +DV+ WN +IS+Y Q+  + +A  LF  M   KV PN+V
Sbjct: 484 DMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKV 543

Query: 378 TMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
           T + +LS C    +L+ G+ +H YI++ G E ++ ++TAL+DMYAKCG++  + +LF+  
Sbjct: 544 TCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNST 603

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
             RD+ +WN M++ YGMHG  E A+  F  ME S +KPN  TF+ LL+AC+H G V EG+
Sbjct: 604 EERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGR 663

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
            +FD+M    G+ P ++HY  ++DLLGR+G L+ A  ++ SMP+ P+  VWG+LL+A K+
Sbjct: 664 HLFDRM-QKYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKI 722

Query: 558 HKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
           H    +G   A   +E +P+N GY +++S++Y+   RW++V  VR +MK+  V+K  G+S
Sbjct: 723 HNEFEVGVRLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMMKKRGVEKRAGWS 782

Query: 618 SV 619
           ++
Sbjct: 783 AL 784



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/556 (23%), Positives = 256/556 (46%), Gaps = 44/556 (7%)

Query: 6   GFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKN 65
           GFL  +        + + H +F+++      + + SL  S+  NN       +++F  K 
Sbjct: 2   GFLRTQVVLMLRLRLSQFHIRFAFS------STFTSLSDSHYPNN------CLHSFFSK- 48

Query: 66  GSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSA 125
                N T  ++L             + H   I  G   + + +  L+  Y+       +
Sbjct: 49  ----PNLTFQSLL-------------QFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFS 91

Query: 126 RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV 185
            +LF  + ++D+  W+++I+ +   G  + A +   +MR     P++  +  +VS  A++
Sbjct: 92  THLFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAEL 151

Query: 186 ADVDLGKAIHACVVRNCKDEKLGV-----AIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
              + G  IH          KLG+     AI ++ I MYSKCG++  A  +F+ +    V
Sbjct: 152 MMFNHGMNIHGLT------SKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDV 205

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           V+WT +I GY++ NE   G++   EM      P+  TI S    C  +  L  GK LH  
Sbjct: 206 VTWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGL 265

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
            L+NGF     + + ++ MY +C     A   F  +  KD++ W ++I+ +++   + + 
Sbjct: 266 ALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSEC 325

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
             LF  M+ S++ P+E+ +  +L     +  +  GK  H  I KQ   +  I   AL+ M
Sbjct: 326 LHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSM 385

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           Y K G +  A ++F  + ++    W+ M+ GY   G  E+ + F  +M   G +P+  + 
Sbjct: 386 YCKFGHLGTANKIF-HSFHKSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSL 444

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
           + ++++CS  G +  G+S+    +    ++  +     ++D+ G++G +  A   I    
Sbjct: 445 VSVISSCSQVGAINIGRSIHCYAIKN-SIIENVSVANSLMDMYGKSGHVT-ATWRIFHRT 502

Query: 541 LRPNMIVWGALLAASK 556
           L+ ++I W  L+++ K
Sbjct: 503 LQRDVISWNTLISSYK 518


>gi|255542116|ref|XP_002512122.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549302|gb|EEF50791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 800

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 211/606 (34%), Positives = 346/606 (57%), Gaps = 12/606 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  ++S+++ Y+ N + S  L ++  +     E+D+ T+ +I  AC ++    L K +HG
Sbjct: 165 LVSWSSIISCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHG 224

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             I+  ++    +++AL+ MYS C    SA  +F  M NR + SW+ MI  Y+R    ++
Sbjct: 225 CIIRQRIETRGPLNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQ 284

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR--NCKDEKLGVAIAT 213
           AL+V  EM    + P+ V +++++S  A    +  GK++H   V+  +  D+ LG     
Sbjct: 285 ALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLG----P 340

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALI+ Y++ G L+Y +++ + + + +++SW ++IS Y       E + +F +M  +   P
Sbjct: 341 ALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIP 400

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGF--EFSLAMANALVDMYGKCREIRSART 331
              ++ S I  C  VG L LG  +H Y ++     EF   + N+L+DMY KC  +  A  
Sbjct: 401 DSFSLSSSISACANVGLLWLGHQIHGYAIKRHILDEF---VQNSLIDMYSKCGHVDLAYL 457

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +FD ++SK V+ WN++I  ++Q     +A  LF  M ++ +  NEVT +  +  C+  G 
Sbjct: 458 IFDRIQSKSVVAWNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGH 517

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           LE GKWLH  +   G++ D+ + TAL+DMYAKCGD+  A+R+F     R +  W+AM+ G
Sbjct: 518 LEKGKWLHHKLIAYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSERSVVSWSAMIGG 577

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
            GMHG  + A+  F +M +  +KPN ITF+ +L+ACSH+G V EGK  F+ M     + P
Sbjct: 578 CGMHGDIDAAISLFAEMIQREMKPNDITFMNILSACSHSGYVEEGKFYFNSM-KNFEVEP 636

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
            +EH+ CMVDLL RAG LDEA+ +I SMP      +WGALL   ++H+   M       +
Sbjct: 637 NLEHFACMVDLLSRAGDLDEAYRIINSMPFPAEASIWGALLNGCRIHQRMDMIRNIERDL 696

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           L++   + GY  L+SNIYA    W+    VR  MK I +KK PG+S++E++  V++F  G
Sbjct: 697 LDMRTDDTGYYTLLSNIYAEEGNWDVSRKVRSAMKGIGLKKVPGYSTIELDKKVYRFGAG 756

Query: 632 GMVNWK 637
            + +W+
Sbjct: 757 DVSHWQ 762



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 153/536 (28%), Positives = 284/536 (52%), Gaps = 6/536 (1%)

Query: 26  KFSYTNIINPLT-RYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV 84
           K  +    NP +  +  L+  ++ +N    A+++Y  M      + +F   ++L+ACA  
Sbjct: 53  KLVFETFQNPDSFMWAVLIKCHVWSNFCGEAISLYNKMIYKQIPISDFIFSSVLRACAGF 112

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
               +G+E+HG  IK GLD D  V  +L+ MY + G L +A+ +FD M  RD+VSWS++I
Sbjct: 113 GNLDVGEEVHGRIIKYGLDVDHVVETSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSII 172

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
             Y   G   E LE+ R +   D+    V M+S+     ++  + L K++H C++R  + 
Sbjct: 173 SCYVDNGESSEGLEMFRLLVSQDVELDSVTMLSIAGACGELGFLRLAKSVHGCIIRQ-RI 231

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
           E  G  +  AL+ MYS+C + + A+++F+ +   S+ SWT MIS Y R     + +++F 
Sbjct: 232 ETRG-PLNDALVLMYSRCDDFSSAERIFSNMFNRSIASWTAMISCYNRSRWFKQALQVFV 290

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           EM+E  V P+ +TI++++  C     L+ GK +H Y +++      ++  AL++ Y +  
Sbjct: 291 EMLEFKVAPNAVTIMAVLSSCAGFNLLREGKSVHCYAVKHIDLDDDSLGPALIEYYAQFG 350

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
           ++     +   +  ++++ WN +IS YA      +A  +F+ M+     P+  ++   +S
Sbjct: 351 KLSYCEKVLHTIGKRNIISWNMLISVYASQGLFKEALGIFVQMQRQGQIPDSFSLSSSIS 410

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
            C   G L +G  +H Y  K+ + +D  ++ +L+DMY+KCG V+ AY +F     + +  
Sbjct: 411 ACANVGLLWLGHQIHGYAIKRHI-LDEFVQNSLIDMYSKCGHVDLAYLIFDRIQSKSVVA 469

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           WN+M+ G+   G   EA+  F  M  + +  N +TF+  + ACSH G + +GK +  K++
Sbjct: 470 WNSMICGFSQIGNSLEAIRLFDQMYLNCLDMNEVTFLTAIQACSHMGHLEKGKWLHHKLI 529

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
              G+   +     ++D+  + G L  AH +  SM  R +++ W A++    +H +
Sbjct: 530 -AYGVKKDLFIDTALIDMYAKCGDLRIAHRVFDSMSER-SVVSWSAMIGGCGMHGD 583



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 239/463 (51%), Gaps = 11/463 (2%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H   +  GL  D   S  LI+ YS+ G L S++ +F+   N D   W+ +I+ +     
Sbjct: 20  LHSHLLVTGLHHDPQASTKLIESYSQIGCLQSSKLVFETFQNPDSFMWAVLIKCHVWSNF 79

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
             EA+ +  +M +  I  S+    S++   A   ++D+G+ +H  +++   D  +   + 
Sbjct: 80  CGEAISLYNKMIYKQIPISDFIFSSVLRACAGFGNLDVGEEVHGRIIKYGLD--VDHVVE 137

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T+L+ MY   G L+ AK++F+ +    +VSW+ +IS Y+   E +EG+ +F  ++ ++V 
Sbjct: 138 TSLLGMYGDLGCLSNAKKVFDNMTTRDLVSWSSIISCYVDNGESSEGLEMFRLLVSQDVE 197

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
              +T+LS+   CG +G L+L K +H  I+R   E    + +ALV MY +C +  SA  +
Sbjct: 198 LDSVTMLSIAGACGELGFLRLAKSVHGCIIRQRIETRGPLNDALVLMYSRCDDFSSAERI 257

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F  M ++ +  W A+IS Y ++    +A ++F+ M   KV PN VT++ +LS C     L
Sbjct: 258 FSNMFNRSIASWTAMISCYNRSRWFKQALQVFVEMLEFKVAPNAVTIMAVLSSCAGFNLL 317

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
             GK +H Y  K     D  L  AL++ YA+ G ++   ++      R+I  WN +++ Y
Sbjct: 318 REGKSVHCYAVKHIDLDDDSLGPALIEYYAQFGKLSYCEKVLHTIGKRNIISWNMLISVY 377

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
              G  +EAL  FV M+R G  P+  +    ++AC++ GL+  G       +HG  +   
Sbjct: 378 ASQGLFKEALGIFVQMQRQGQIPDSFSLSSSISACANVGLLWLGHQ-----IHGYAIKRH 432

Query: 513 IEH---YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           I        ++D+  + G +D A+ +   +  + +++ W +++
Sbjct: 433 ILDEFVQNSLIDMYSKCGHVDLAYLIFDRIQSK-SVVAWNSMI 474


>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 764

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/591 (33%), Positives = 342/591 (57%), Gaps = 5/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + S++  Y +  +   A +++  MR+ G +  + T+ ++L   ++  + H+ + +HG AI
Sbjct: 138 WTSIIGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSE--LAHV-QCLHGSAI 194

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G   D  +SN+++ MY +C ++  +R LFD M  RD+VSW++++  Y + G   E L 
Sbjct: 195 LYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLL 254

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +++ MR     P      S++S+ A   ++ LG+ +H  ++R C D  L   + T+LI M
Sbjct: 255 LLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFD--LDAHVETSLIVM 312

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y K GN+  A ++F R     VV WT MISG ++    ++ + +F +M++  V  S  T+
Sbjct: 313 YLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATM 372

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S+I  C  +G   LG  +H Y+ R+     +A  N+LV M+ KC  +  +  +FD M  
Sbjct: 373 ASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNK 432

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           ++++ WNA+I+ YAQ   + KA  LF  M+     P+ +T+V LL  C   G L +GKW+
Sbjct: 433 RNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWI 492

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H+++ + GL   +++ T+LVDMY KCGD++ A R F++    D+  W+A++ GYG HG G
Sbjct: 493 HSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAIIVGYGYHGKG 552

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           E AL F+     SG+KPN + F+ +L++CSH GLV +G ++++ M    G+ P +EH+ C
Sbjct: 553 ETALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFGIAPNLEHHAC 612

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VDLL RAG ++EA+ + K     P + V G +L A + + N  +G+  A  IL ++P +
Sbjct: 613 VVDLLSRAGRVEEAYNLYKKKFSDPVLDVLGIILDACRANGNNELGDTIANDILMLKPMD 672

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            G  V +++ YA  N+W +V      M+ + +KK PG+S ++++G +  F 
Sbjct: 673 AGNFVQLAHCYASINKWEEVGEAWTHMRSLGLKKIPGWSFIDIHGTITTFF 723



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 160/525 (30%), Positives = 271/525 (51%), Gaps = 11/525 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N+++  +         L  YA M K     D +T P++LKAC+ + +  LG  +H 
Sbjct: 34  INSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQ 93

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             + +GL  DAY++++LI  Y++ G    AR +FD MP R+VV W+++I  Y R G   E
Sbjct: 94  RILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPE 153

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL--GKAIHACVVRNCKDEKLGVAIAT 213
           A  +  EMR   I+PS V M+S++   +++A V    G AI    + +       + ++ 
Sbjct: 154 AFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQCLHGSAILYGFMSD-------INLSN 206

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           +++ MY KC N+ Y+++LF+ ++Q  +VSW  ++S Y +   I E + L   M  +   P
Sbjct: 207 SMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEP 266

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T  S++      G L+LG+ LH  ILR  F+    +  +L+ MY K   I  A  +F
Sbjct: 267 DPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMF 326

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           +    KDV++W A+IS   Q    DKA  +F  M    V+ +  TM  +++ C + G+  
Sbjct: 327 ERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYN 386

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           +G  +H Y+ +  L +D+  + +LV M+AKCG ++ +  +F +   R++  WNAM+ GY 
Sbjct: 387 LGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYA 446

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +G   +AL  F +M      P+ IT + LL  C+  G +  GK +   ++   GL P I
Sbjct: 447 QNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRN-GLRPCI 505

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
                +VD+  + G LD A      MP   +++ W A++     H
Sbjct: 506 LVDTSLVDMYCKCGDLDIAQRCFNQMP-SHDLVSWSAIIVGYGYH 549



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 111/256 (43%), Gaps = 27/256 (10%)

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           S  +  +NA+I+ ++      +    +  M  + V  +  T   LL  C+      +G  
Sbjct: 31  SATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLS 90

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH  I   GL +D  + ++L++ YAK G  + A ++F     R++  W +++  Y   G 
Sbjct: 91  LHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGR 150

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG----LGLVPKI 513
             EA   F +M R G++P+ +T + LL   S    V        + +HG     G +  I
Sbjct: 151 VPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHV--------QCLHGSAILYGFMSDI 202

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL- 572
                M+ + G+   ++ + ++   M  R +++ W +L++A        +G I    +L 
Sbjct: 203 NLSNSMLSMYGKCRNIEYSRKLFDYMDQR-DLVSWNSLVSAYA-----QIGYICEVLLLL 256

Query: 573 --------EIEPQNYG 580
                   E +PQ +G
Sbjct: 257 KTMRIQGFEPDPQTFG 272


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 205/577 (35%), Positives = 336/577 (58%), Gaps = 2/577 (0%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           M   G   + F++ T+L ACA +   + G ++HG+ IK G D D + +NAL+ MY++ G 
Sbjct: 179 MISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGC 238

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
             +A  +F E+P  D+VSW+ +I G       + AL+++ +M    + PS   + S +  
Sbjct: 239 PEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSSALKA 298

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
            A +  V LG+ +H+ +++   D +    +   LIDMYSKCG L  A+ +F+ +    V+
Sbjct: 299 CAAIGLVKLGRQLHSALMK--MDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVI 356

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
            W  +ISGY  C    E + LF  M +E +  ++ T+ +++            + +H   
Sbjct: 357 VWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTIS 416

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
           +++G+++   +AN+L+D YGKC  +  A  +F+   ++D++ + ++I+AY+Q    ++A 
Sbjct: 417 IKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEAL 476

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
           ++++ M+   ++P+      L + C    A E GK +H ++ K GL  DV    +LV+MY
Sbjct: 477 KMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMY 536

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
           AKCG ++ A  +F+E  +R I  W+AM+ G   HG G +AL  F  M ++G+ PN IT +
Sbjct: 537 AKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLV 596

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
            +L+AC+HAGLVTE +  F  M    G+ P  EHY CMVD+LGR G LDEA  ++K MP 
Sbjct: 597 SVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPF 656

Query: 542 RPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGV 601
           + +  VWGALL A+++HKN  +G  AA  +L +EP+  G ++L++NIYA    W++VA V
Sbjct: 657 QASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKV 716

Query: 602 RRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           RR MK   VKKEPG S +E+   V+ FI G   + +S
Sbjct: 717 RRSMKNSLVKKEPGMSWIELKDKVYTFIVGDRSHPRS 753



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 232/486 (47%), Gaps = 44/486 (9%)

Query: 113 IQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSE 172
           + +YS+C     AR L  +    D+VSWS +I GY + G  EEAL    EM  +  + +E
Sbjct: 89  VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148

Query: 173 VAMISMVSLFADVADVDLGKAIH--------------------ACVVRNC---KDEKLGV 209
               S++   +   +++LGK IH                    + V+  C   +DE  G+
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208

Query: 210 AI---------------ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
            +               A AL+DMY+K G    A  +F  + +  +VSW  +I+G +   
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
           + +  ++L  +M    V PS  T+ S +  C  +G ++LG+ LH+ +++   E    +  
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
            L+DMY KC  ++ AR +FD M  KDV++WN++IS Y+      +A  LF +M    +  
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           N+ T+  +L     + A    + +HT   K G + D  +  +L+D Y KC  +  A ++F
Sbjct: 389 NQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVF 448

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
                 D+  + +M+  Y  +G GEEAL  ++ M+   +KP+   F  L NAC++     
Sbjct: 449 EVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYE 508

Query: 495 EGKSVFDKMVHGL--GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           +GK +    VH L  GL+  +     +V++  + G +D+A  +   +  R  ++ W A++
Sbjct: 509 QGKQIH---VHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWR-GIVSWSAMI 564

Query: 553 AASKLH 558
                H
Sbjct: 565 GGLAQH 570



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 227/476 (47%), Gaps = 13/476 (2%)

Query: 5   NGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRK 64
           N  L++     C    I   ++    +I++    +N+++   + + K   AL +   M  
Sbjct: 227 NALLDMYAKSGCPEAAIAVFYEIPKPDIVS----WNAVIAGCVLHEKNDLALKLLGKMGS 282

Query: 65  NGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVS 124
                  FT+ + LKACA + +  LG+++H   +K  ++ D++V   LI MYS+CG L  
Sbjct: 283 YRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQD 342

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           AR +FD MP +DV+ W+++I GY   G   EA+ +   M    +  ++  + +++   A 
Sbjct: 343 ARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAG 402

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
                  + +H   +++    +    +A +L+D Y KC  L  A ++F       +V++T
Sbjct: 403 SQANGFCEQVHTISIKS--GYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYT 460

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
            MI+ Y +     E ++++  M + ++ P      SL   C  +   + GK +H ++L+ 
Sbjct: 461 SMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKC 520

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
           G    +   N+LV+MY KC  I  A  +F+ +  + ++ W+A+I   AQ     KA +LF
Sbjct: 521 GLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRKALQLF 580

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVDVILKTALVDMYAK 423
             M  + + PN +T+V +LS C  AG +   +     +EK  G+         +VD+  +
Sbjct: 581 YQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHYACMVDILGR 640

Query: 424 CGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMH-----GCGEEALIFFVDMERSGV 473
            G ++ A  L  E  ++    +W A++    +H     G     ++  ++ E+SG 
Sbjct: 641 VGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLTLEPEKSGT 696



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 202/441 (45%), Gaps = 58/441 (13%)

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
           F    DV  G AIHA ++R        + +   L+++YSKC     A++L    ++  +V
Sbjct: 60  FTASKDVSSGMAIHARIIR-----LGLLGLRNRLVNLYSKCQCFRVARKLVIDSSEPDLV 114

Query: 242 SWTVMISGYIRCNEINEG----------------------------------------VR 261
           SW+ +ISGY++     E                                         V 
Sbjct: 115 SWSALISGYVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVA 174

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           L  EMI   + P+E ++ +++  C  +     G  +H Y+++ G++     ANAL+DMY 
Sbjct: 175 LVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYA 234

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           K     +A  +F  +   D++ WNAVI+        D A +L   M   +V P+  T+  
Sbjct: 235 KSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLLGKMGSYRVAPSMFTLSS 294

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
            L  C   G +++G+ LH+ + K  +E D  +   L+DMY+KCG +  A  +F     +D
Sbjct: 295 ALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKD 354

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           + +WN++++GY   G   EA+  F +M + G++ N  T   +L   S AG    G   F 
Sbjct: 355 VIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEFNQTTLSTILK--STAGSQANG---FC 409

Query: 502 KMVHGLGLVPKIEHYG----CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
           + VH + +    ++ G     ++D  G+  LL++A ++ +  P   +++ + +++ A   
Sbjct: 410 EQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAE-DLVAYTSMITA--- 465

Query: 558 HKNPSMGEIAATQILEIEPQN 578
           +    +GE A    L ++ ++
Sbjct: 466 YSQYGLGEEALKMYLRMQDRD 486


>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 783

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 210/584 (35%), Positives = 333/584 (57%), Gaps = 3/584 (0%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           NP+T + +++T Y +  +   AL ++  M  +G   D F + +   AC+ +     G++I
Sbjct: 202 NPVT-WTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQI 260

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG+A +   + DA V NALI +Y +C  L+ AR LFD M NR++VSW+TMI GY +  L 
Sbjct: 261 HGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLD 320

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            EA+ +  ++     +P   A  S+++    +A +  G+ +HA V++   D +    +  
Sbjct: 321 TEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIK--ADLESDEYVKN 378

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALIDMY+KC +L  A+ +F  L ++  +S+  MI GY R  ++   V +F +M   ++ P
Sbjct: 379 ALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKP 438

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           S +T +SL+        L+L K +H  I+++G    L   +AL+D+Y K   +  A+ +F
Sbjct: 439 SLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVF 498

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
             M+++D++IWNA+I   AQ    ++A +LF  ++VS + PNE T V L+++ +   ++ 
Sbjct: 499 SLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIF 558

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            G+  H  I K G + D  +  AL+DMYAKCG +     LF   + +D+  WN+M++ Y 
Sbjct: 559 HGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTYA 618

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            HG  EEAL  F  ME +GV+PN +TF+ +L+AC+HAGLV EG   F+ M     + P  
Sbjct: 619 QHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPGT 678

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHY  +V+L GR+G L  A E I+ MP+ P   +W +LL+A  L  N  +G  A    L 
Sbjct: 679 EHYASVVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYATEMALL 738

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
            +P + G +VLMSNIYA    W D   +R+ M    V KEPG+S
Sbjct: 739 ADPADSGPSVLMSNIYASKGLWADAQKLRQGMDCAGVVKEPGYS 782



 Score =  284 bits (727), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 154/530 (29%), Positives = 279/530 (52%), Gaps = 12/530 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFM------RKNGSEVDNFTIPTILKACAQVLMTHL 89
           L  + S ++ Y ++ +   AL ++A          +G   + F + + L+ACAQ      
Sbjct: 96  LVSWGSAISMYAQHGREDDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARF 155

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G+++HG A K GLD + +V  AL+ +Y++ G + +A  +FD +P R+ V+W+ +I GY +
Sbjct: 156 GEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQ 215

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
            G    ALE+   M    +RP    + S  S  + +  V+ G+ IH    R   +     
Sbjct: 216 AGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESD--A 273

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
           ++  ALID+Y KC  L  A++LF+ +   ++VSWT MI+GY++ +   E + +F ++ + 
Sbjct: 274 SVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQA 333

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
              P      S++  CG +  +  G+ +HA++++   E    + NAL+DMY KC  +  A
Sbjct: 334 GWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEA 393

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           R +F+ +   D + +NA+I  YA+   +  A E+F  M+   ++P+ +T V LL + +  
Sbjct: 394 RAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSR 453

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
             LE+ K +H  I K G  +D+   +AL+D+Y+K   V+ A  +FS    RD+ +WNAM+
Sbjct: 454 SDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMI 513

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLG 508
            G   +  GEEA+  F  +  SG+ PN  TF+ L+   S    +  G+    +++  G  
Sbjct: 514 FGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASIFHGQQFHAQIIKAGAD 573

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             P I +   ++D+  + G ++E   + +S  L  ++I W ++++    H
Sbjct: 574 SDPHISN--ALIDMYAKCGFIEEGRLLFEST-LGKDVICWNSMISTYAQH 620



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/469 (28%), Positives = 232/469 (49%), Gaps = 18/469 (3%)

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           H  A+ +GL  D +++N L++ YS+ G L  AR LFD MP+R++VSW + I  Y + G  
Sbjct: 53  HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGRE 112

Query: 154 EEALEVMREMRFMDIR------PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
           ++AL +                P+E  + S +   A       G+ +H    +   D   
Sbjct: 113 DDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDAN- 171

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            V + TAL+++Y+K G +  A  +F+ L   + V+WT +I+GY +  +    + LF  M 
Sbjct: 172 -VFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMG 230

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
            + V P    + S    C  +G ++ G+ +H Y  R   E   ++ NAL+D+Y KC  + 
Sbjct: 231 LDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLL 290

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            AR LFD M++++++ W  +I+ Y Q     +A  +F  +  +  +P+      +L+ C 
Sbjct: 291 LARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCG 350

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
              A+  G+ +H ++ K  LE D  +K AL+DMYAKC  +  A  +F      D   +NA
Sbjct: 351 SLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNA 410

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           M+ GY   G    A+  F  M    +KP+ +TF+ LL   S     +       K +HGL
Sbjct: 411 MIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSS-----SRSDLELSKQIHGL 465

Query: 508 ----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
               G    +     ++D+  +  L+D+A +++ S+    +M++W A++
Sbjct: 466 IVKSGTSLDLYAGSALIDVYSKFSLVDDA-KLVFSLMQNRDMVIWNAMI 513


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/598 (33%), Positives = 335/598 (56%), Gaps = 2/598 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + +LV ++ +     +A  ++  +R  G EV+ F + T+LK    +    L   +H 
Sbjct: 127 MVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHS 186

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A K G D +A+V + LI  YS C  +  A ++F+ +  +D V W+ M+  Y     PE 
Sbjct: 187 CAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPEN 246

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A  V  +MR    +P+  A+ S++     +  V LGK IH C ++   D +  V    AL
Sbjct: 247 AFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVG--GAL 304

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+KCG++  A+  F  +  + V+  + MIS Y + N+  +   LF  ++  +V P+E
Sbjct: 305 LDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNE 364

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            ++ S++  C  +  L  GK +H + ++ G E  L + NAL+D Y KC ++ S+  +F  
Sbjct: 365 YSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSS 424

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++  + + WN ++  ++Q+   ++A  +F  M+ +++   +VT   +L  C    ++   
Sbjct: 425 LRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHA 484

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H  IEK     D ++  +L+D YAKCG +  A ++F   + RDI  WNA+++GY +H
Sbjct: 485 GQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALH 544

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G   +AL  F  M +S V+ N ITF+ LL+ CS  GLV  G S+FD M    G+ P +EH
Sbjct: 545 GQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEH 604

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y C+V LLGRAG L++A + I  +P  P+ +VW ALL++  +HKN ++G  +A +ILEIE
Sbjct: 605 YTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIE 664

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGM 633
           PQ+    VL+SN+YA A   + VA +R+ M+ I V+K PG S VE+ G +H F  G +
Sbjct: 665 PQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSV 722



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 145/501 (28%), Positives = 257/501 (51%), Gaps = 24/501 (4%)

Query: 69  VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG--DAYVSNALIQMYSECGSLVSAR 126
           VD+F     L+ C        G+ +HG  ++ G  G  D + +N L+ MY + G L SAR
Sbjct: 57  VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116

Query: 127 YLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            LFD MP R++VS+ T+++ + + G  E A  + R +R+     ++  + +M+ L   + 
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMD 176

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
              L   +H+C  +   D      + + LID YS C  ++ A+ +FN + +   V WT M
Sbjct: 177 AAGLAGGVHSCAWKLGHDH--NAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           +S Y   +      R+F++M      P+   + S++     +  + LGK +H   ++   
Sbjct: 235 VSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLN 294

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
           +    +  AL+DMY KC +I+ AR  F+ +   DV++ + +IS YAQ++  ++AFELF+ 
Sbjct: 295 DTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLR 354

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           +  S V PNE ++  +L  CT    L+ GK +H +  K G E D+ +  AL+D YAKC D
Sbjct: 355 LMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCND 414

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           ++ + ++FS     +   WN ++ G+   G GEEAL  F +M+ + +    +T+  +L A
Sbjct: 415 MDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRA 474

Query: 487 CS------HAGLV--TEGKSVF-DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK 537
           C+      HAG +  +  KS F +  V G            ++D   + G + +A ++ +
Sbjct: 475 CASTASIRHAGQIHCSIEKSTFNNDTVIG----------NSLIDTYAKCGYIRDALKVFQ 524

Query: 538 SMPLRPNMIVWGALLAASKLH 558
            +  R ++I W A+++   LH
Sbjct: 525 HLMER-DIISWNAIISGYALH 544


>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
 gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
          Length = 749

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/654 (34%), Positives = 360/654 (55%), Gaps = 33/654 (5%)

Query: 7   FLNLEQTRQCHAHIIKTHFKFSYTNIINPL--------------------------TRYN 40
           FL+    +  HA +IK  F  S+T+I N +                            +N
Sbjct: 60  FLSHRHGKSLHACLIKQGFD-SFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWN 118

Query: 41  SLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
            L+  ++ N    + L  +   R  G E +  T+  +++AC  +   H G  +HG+ IK+
Sbjct: 119 ILIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKS 178

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G    + V N+L+ MY +   +  AR LFDEM  +DV++WS MI GY +   P+  L++ 
Sbjct: 179 GFWAISSVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMF 237

Query: 161 REMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
           R+M  +  I P  V M+S++   A   DV  G+ +H  V+    D  L V    +LIDMY
Sbjct: 238 RKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVE--NSLIDMY 295

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
           SKC +   A ++FN ++Q + VSW  M+SG++     +E   L + M +E V   E+T++
Sbjct: 296 SKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLV 355

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           +++  C +       K +H  ++R G E +  + +AL+D Y KC  I  A  +F  M+ +
Sbjct: 356 NILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRR 415

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           DV+ W+ +IS +A     D+A  ++  M    V+PN +T++ LL  C+    L+  KW H
Sbjct: 416 DVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAH 475

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
               +QG   +V + TA+VDMY+KCG++  + R F +   ++I  W+AM+A YGM+G   
Sbjct: 476 GVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAH 535

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           EAL  F +M+R G+KPN +T + +L ACSH GLV EG S+F  MV  LGL P  EHY CM
Sbjct: 536 EALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCM 595

Query: 520 VDLLGRAGLLDEAHEMIKSMP--LRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           VD+LGRAG LD A E+IK+MP  L+    +WG+LL+A + +    +G+ A +++LE+EP 
Sbjct: 596 VDMLGRAGKLDTAIEVIKAMPHNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPS 655

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           N    ++ S++YA    W+D A +R + KE  VK   G+S V ++    +F+ G
Sbjct: 656 NSAGYLVASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNKACRFVAG 709



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 262/517 (50%), Gaps = 25/517 (4%)

Query: 49  NNKPSSALNIYAFMRKNGSE-VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAY 107
           N K    ++ Y  ++K G + VD    P ILKA + +   H GK +H   IK G D    
Sbjct: 25  NGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRH-GKSLHACLIKQGFDSFTS 83

Query: 108 VSNALIQMYSECGSLVSARYLFDEM-PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM 166
           + N+++  Y  CG    A  +F+ M  +RD VSW+ +I G+   G     L      R  
Sbjct: 84  IGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVA 143

Query: 167 DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV----AIATALIDMYSKC 222
              P+   M+ ++     +     G  +H  ++++      G     ++  +L+ MY   
Sbjct: 144 GFEPNISTMVLVIQACRILGTKHDGLILHGYLIKS------GFWAISSVQNSLLSMYVD- 196

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI-EENVFPSEITILSL 281
            ++  A++LF+ +++  V++W+VMI GY++  E   G+++F +M+    + P  + ++S+
Sbjct: 197 ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSV 256

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +  C     +  G+ +H  ++  GF+  L + N+L+DMY KC++  SA  +F+ +  ++ 
Sbjct: 257 LKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNN 316

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           + WN+++S +       +A  L   M+  +V  +EVT+V +L +C         K +H  
Sbjct: 317 VSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCV 376

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
           + ++G E + ++ +AL+D YAKC  +  A+ +F+    RD+  W+ M++G+   G  +EA
Sbjct: 377 MIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEA 436

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLVPKIEHYG 517
           +  + +M+R  VKPN IT I LL ACS   +  E K    K  HG+    G   ++    
Sbjct: 437 IAVYQEMDRDLVKPNVITIINLLEACS---VTAELKR--SKWAHGVAIRQGFASEVTVGT 491

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            +VD+  + G +  +      + L+ N++ W A++AA
Sbjct: 492 AVVDMYSKCGEILASRRAFDQLALK-NIVTWSAMIAA 527



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 205/425 (48%), Gaps = 12/425 (2%)

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
           ++PN     W   I+     G  +E +    E++   I+  +V++   +           
Sbjct: 11  KLPN-----WILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRH 65

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQN-SVVSWTVMISG 249
           GK++HAC+++   D     +I  +++  Y +CG+   A  +FN + ++   VSW ++I G
Sbjct: 66  GKSLHACLIKQGFDSF--TSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHG 123

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
           ++    +  G+  F         P+  T++ +I  C  +G    G  LH Y++++GF   
Sbjct: 124 HLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAI 183

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK- 368
            ++ N+L+ MY    ++  AR LFD M  KDV+ W+ +I  Y Q        ++F  M  
Sbjct: 184 SSVQNSLLSMYVDA-DMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVL 242

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
           V  + P+ V MV +L  C  +  +  G+ +H  +  +G + D+ ++ +L+DMY+KC D  
Sbjct: 243 VPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAG 302

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A+++F+E   R+   WN+M++G+ ++    EA      M +  V+ + +T + +L  C 
Sbjct: 303 SAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICK 362

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           +       KS+   M+       ++     ++D   +  L++ A E+   M  R +++ W
Sbjct: 363 YFVHPFHCKSIHCVMIRRGSEANELV-LSALIDAYAKCYLIEIAWEVFARMR-RRDVVSW 420

Query: 549 GALLA 553
             +++
Sbjct: 421 STMIS 425


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 218/596 (36%), Positives = 348/596 (58%), Gaps = 9/596 (1%)

Query: 39  YNSLVTSYIKNNKPSSALN-IYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +NS++++Y+ N     A+   Y  +  +    D +T P +LKAC  ++    G++IH +A
Sbjct: 185 WNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWA 241

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
            K G   + +V+ +LI MYS  G    AR LFD+MP RD+ SW+ MI G  + G   +AL
Sbjct: 242 FKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 301

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           +V+ EMR   I+ + V ++S++ +   + D+     IH  V+++  +  L V+   ALI+
Sbjct: 302 DVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVS--NALIN 359

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+K GNL  A++ F ++    VVSW  +I+ Y + ++       F +M      P  +T
Sbjct: 360 MYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLT 419

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEF-SLAMANALVDMYGKCREIRSARTLFDGM 336
           ++SL          +  + +H +I+R G+    + + NA+VDMY K   + SA  +F+ +
Sbjct: 420 LVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEII 479

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMG 395
             KDV+ WN +I+ YAQ     +A E++  M+  K + PN+ T V +L      GAL+ G
Sbjct: 480 PVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG 539

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H  + K  L +DV + T L+D+Y KCG +  A  LF +        WNA+++ +G+H
Sbjct: 540 MKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIH 599

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  E+ L  F +M   GVKP+ +TF+ LL+ACSH+G V EGK  F +++   G+ P ++H
Sbjct: 600 GHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF-RLMQEYGIKPSLKH 658

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           YGCMVDLLGRAG L+ A++ IK MPL+P+  +WGALL A ++H N  +G+ A+ ++ E++
Sbjct: 659 YGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVD 718

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            +N GY VL+SNIYA   +W  V  VR + +E  +KK PG+S++EVN  V  F  G
Sbjct: 719 SKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTG 774



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 150/548 (27%), Positives = 275/548 (50%), Gaps = 30/548 (5%)

Query: 19  HIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVD-NFTIPTI 77
           HI+    K  YT+   P  R    + S  ++   S   + Y    +N  E+D NF   + 
Sbjct: 74  HILAPTLKSRYTSKFLPPRRRPIQLFSAARS---SPQFSSYGLGNQN-EEIDFNFLFDSS 129

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
            K       T   K +H   +  G     ++S  L+ +Y+  G +  +R  FD++P +DV
Sbjct: 130 TK-------TPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDV 182

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHA 196
            +W++MI  Y   G   EA+    ++  + +IRP       ++     + D   G+ IH 
Sbjct: 183 YAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIH- 238

Query: 197 CVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
                C   KLG    V +A +LI MYS+ G    A+ LF+ +    + SW  MISG I+
Sbjct: 239 -----CWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQ 293

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
                + + +  EM  E +  + +T++S++  C  +G +     +H Y++++G EF L +
Sbjct: 294 NGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFV 353

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
           +NAL++MY K   +  AR  F  M   DV+ WN++I+AY Q      A   F+ M+++  
Sbjct: 354 SNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGF 413

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG-LEVDVILKTALVDMYAKCGDVNGAY 431
           +P+ +T+V L S+  ++   +  + +H +I ++G L  DV++  A+VDMYAK G ++ A+
Sbjct: 414 QPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAH 473

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER-SGVKPNGITFIGLLNACSHA 490
           ++F     +D+  WN ++ GY  +G   EA+  +  ME    + PN  T++ +L A +H 
Sbjct: 474 KVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHV 533

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           G + +G  +  +++    L   +    C++D+ G+ G L +A  +   +P + + + W A
Sbjct: 534 GALQQGMKIHGRVIK-TNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNA 591

Query: 551 LLAASKLH 558
           +++   +H
Sbjct: 592 IISCHGIH 599


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 211/578 (36%), Positives = 326/578 (56%), Gaps = 6/578 (1%)

Query: 55  ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
           A+  Y+ M   G + D FT P ++K+ A +     GK+IH   IK G   D YV N+LI 
Sbjct: 114 AVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLIS 173

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           +Y + G    A  +F+EMP RD+VSW++MI GY   G    +L + +EM     +P   +
Sbjct: 174 LYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFS 233

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
            +S +   + V    +GK IH   VR+ + E   V + T+++DMYSK G ++YA+++FN 
Sbjct: 234 TMSALGACSHVYSPKMGKEIHCHAVRS-RIETGDVMVMTSILDMYSKYGEVSYAERIFNG 292

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN-VFPSEITILSLIIECGFVGGLQL 293
           + Q ++V+W VMI  Y R   + +    F +M E+N + P  IT ++L+        +  
Sbjct: 293 MIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLP----ASAILE 348

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           G+ +H Y +R GF   + +  AL+DMYG+C +++SA  +FD M  K+V+ WN++I+AY Q
Sbjct: 349 GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ 408

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
                 A ELF  +  S + P+  T+  +L    E+ +L  G+ +H YI K     + I+
Sbjct: 409 NGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII 468

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
             +LV MYA CGD+  A + F+  + +D+  WN+++  Y +HG G  ++  F +M  S V
Sbjct: 469 LNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV 528

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
            PN  TF  LL ACS +G+V EG   F+ M    G+ P IEHYGCM+DL+GR G    A 
Sbjct: 529 NPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAK 588

Query: 534 EMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVAN 593
             ++ MP  P   +WG+LL AS+ HK+ ++ E AA QI ++E  N G  VL+ N+YA A 
Sbjct: 589 RFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAG 648

Query: 594 RWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           RW DV  ++ +M+   + +    S+VE  G  H F  G
Sbjct: 649 RWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNG 686



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 218/404 (53%), Gaps = 9/404 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +NS+++ Y+      S+L ++  M K G + D F+  + L AC+ V    +GKEIH 
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHC 255

Query: 96  FAIKNGLD-GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
            A+++ ++ GD  V  +++ MYS+ G +  A  +F+ M  R++V+W+ MI  Y R G   
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT 315

Query: 155 EALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           +A    ++M   + ++P  +  I+++   A +     G+ IH   +R  +     + + T
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMR--RGFLPHMVLET 369

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALIDMY +CG L  A+ +F+R+ + +V+SW  +I+ Y++  +    + LF E+ + ++ P
Sbjct: 370 ALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVP 429

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              TI S++        L  G+ +HAYI+++ +  +  + N+LV MY  C ++  AR  F
Sbjct: 430 DSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCF 489

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + +  KDV+ WN++I AYA       +  LF  M  S+V PN+ T   LL+ C+ +G ++
Sbjct: 490 NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVD 549

Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
            G ++  +   + G++  +     ++D+  + G+ + A R   E
Sbjct: 550 EGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEE 593



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 222/437 (50%), Gaps = 18/437 (4%)

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           LFDEM   D   W+ MI+G+   GL  EA++    M F  ++        ++   A ++ 
Sbjct: 86  LFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISS 145

Query: 188 VDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSW 243
           ++ GK IHA V+      KLG    V +  +LI +Y K G    A+++F  + +  +VSW
Sbjct: 146 LEEGKKIHAMVI------KLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199

Query: 244 TVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
             MISGY+   +    + LF EM++    P   + +S +  C  V   ++GK +H + +R
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259

Query: 304 NGFEFSLAMA-NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
           +  E    M   +++DMY K  E+  A  +F+GM  ++++ WN +I  YA+   +  AF 
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319

Query: 363 LFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
            F  M + + ++P+ +T + LL     A A+  G+ +H Y  ++G    ++L+TAL+DMY
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLP----ASAILEGRTIHGYAMRRGFLPHMVLETALIDMY 375

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
            +CG +  A  +F     +++  WN+++A Y  +G    AL  F ++  S + P+  T  
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
            +L A + +  ++EG+ +   +V        I     +V +    G L++A +    + L
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSRYWSNTI-ILNSLVHMYAMCGDLEDARKCFNHILL 494

Query: 542 RPNMIVWGALLAASKLH 558
           + +++ W +++ A  +H
Sbjct: 495 K-DVVSWNSIIMAYAVH 510



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 172/333 (51%), Gaps = 16/333 (4%)

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A QLF+ +N+     W VMI G+  C    E V+ ++ M+   V     T   +I     
Sbjct: 83  ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
           +  L+ GK +HA +++ GF   + + N+L+ +Y K      A  +F+ M  +D++ WN++
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           IS Y        +  LF  M     +P+  + +  L  C+   + +MGK +H +  +  +
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262

Query: 408 EV-DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
           E  DV++ T+++DMY+K G+V+ A R+F+  I R+I  WN M+  Y  +G   +A + F 
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322

Query: 467 DM-ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLVPKIEHYGCMVD 521
            M E++G++P+ IT I LL A +    + EG++     +HG     G +P +     ++D
Sbjct: 323 KMSEQNGLQPDVITSINLLPASA----ILEGRT-----IHGYAMRRGFLPHMVLETALID 373

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           + G  G L  A  +   M  + N+I W +++AA
Sbjct: 374 MYGECGQLKSAEVIFDRMAEK-NVISWNSIIAA 405



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 11/238 (4%)

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
           +   R +  A  LFD M   D  +WN +I  +       +A + +  M  + V+ +  T 
Sbjct: 74  FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
             ++       +LE GK +H  + K G   DV +  +L+ +Y K G    A ++F E   
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193

Query: 440 RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           RDI  WN+M++GY   G G  +L+ F +M + G KP+  + +  L ACSH      GK  
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE- 252

Query: 500 FDKMVHGLGLVPKIEHYGCMV-----DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
               +H   +  +IE    MV     D+  + G +  A  +   M  R N++ W  ++
Sbjct: 253 ----IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQR-NIVAWNVMI 305


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/527 (39%), Positives = 320/527 (60%), Gaps = 8/527 (1%)

Query: 110 NALIQMYSECGSL-VSARY-LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM--RF 165
           N LI      GSL V   Y +F      DV++W++M+R +    +P  AL+   EM  R 
Sbjct: 14  NKLIAHVLSMGSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERS 73

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
            ++ P      S++   A + +  +GK +H  VV+      L   I T L++MY+ CG+L
Sbjct: 74  RNV-PDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDL--YIETTLLNMYAACGDL 130

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
             A+ LF R+   + V WT MISGY++ +  NE + L+ +M E+   P E+T+ +L+  C
Sbjct: 131 KSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSAC 190

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
             +  L +G  LH++I     +    + +ALV+MY KC ++++AR +FD +  KDV  W+
Sbjct: 191 AELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWS 250

Query: 346 AVISAYAQAHCIDKAFELFIHMKV-SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK 404
           A+I  Y + +   +A +LF  +   S +RPNEVT++ ++S C + G LE G+W+H YI +
Sbjct: 251 ALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITR 310

Query: 405 QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIF 464
                 V L  +L+DM++KCGD++ A R+F    Y+D+  WN+M+ G+ +HG G EAL  
Sbjct: 311 TQKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQ 370

Query: 465 FVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLG 524
           F  M+ + ++P+ ITFIG+L ACSHAGLV EGK +F ++    G+  K EHYGCMVDLL 
Sbjct: 371 FRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLC 430

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVL 584
           RAGLL EA E I+ MPL+P+  +WG++L A +++ N  +GE AA  +L++EP N G  +L
Sbjct: 431 RAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYIL 490

Query: 585 MSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +SNIYA    WN+V  VR +M E  ++K PG SSV ++ + H F+ G
Sbjct: 491 LSNIYAKRKMWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAG 537



 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 160/484 (33%), Positives = 276/484 (57%), Gaps = 14/484 (2%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVL 85
           F++T  ++ LT +NS++ +++ +N P  AL  Y  M +    V D FT P++LK CA +L
Sbjct: 35  FAHTRELDVLT-WNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLL 93

Query: 86  MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIR 145
              +GK +HG  +K  L  D Y+   L+ MY+ CG L SAR+LF+ M +R+ V W++MI 
Sbjct: 94  EFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMIS 153

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           GY +   P EAL + ++M      P EV M ++VS  A++ D+ +G  +H+ +     D 
Sbjct: 154 GYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIRE--MDM 211

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           K+   + +AL++MY+KCG+L  A+Q+F++L+   V +W+ +I GY++ N   E ++LF E
Sbjct: 212 KICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFRE 271

Query: 266 MI-EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           +    N+ P+E+TIL++I  C  +G L+ G+W+H YI R     S+++ N+L+DM+ KC 
Sbjct: 272 VAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCG 331

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
           +I +A+ +FD M  KD++ WN++++ +A      +A   F  M+ + ++P+E+T +G+L+
Sbjct: 332 DIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLT 391

Query: 385 LCTEAGALEMGKWLHTYIEK-QGLEVDVILKTALVDMYAKCGDVNGAYRLFS-EAIYRDI 442
            C+ AG ++ GK L   IE   G+ +       +VD+  + G +  A        +  D 
Sbjct: 392 ACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDG 451

Query: 443 CMWNAMMAG---YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
            +W +M+     Y     GEEA  F + +E +    N   +I L N  +   +  E K V
Sbjct: 452 AIWGSMLGACRVYNNLELGEEAARFLLKLEPT----NDGVYILLSNIYAKRKMWNEVKKV 507

Query: 500 FDKM 503
            + M
Sbjct: 508 RELM 511


>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
          Length = 749

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/654 (34%), Positives = 360/654 (55%), Gaps = 33/654 (5%)

Query: 7   FLNLEQTRQCHAHIIKTHFKFSYTNIINPL--------------------------TRYN 40
           FL+    +  HA +IK  F  S+T+I N +                            +N
Sbjct: 60  FLSHRHGKSLHACLIKQGFD-SFTSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWN 118

Query: 41  SLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
            L+  ++ N    + L  +   R  G E +  T+  +++AC  +   H G  +HG+ IK+
Sbjct: 119 ILIHGHLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKS 178

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G    + V N+L+ MY +   +  AR LFDEM  +DV++WS MI GY +   P+  L++ 
Sbjct: 179 GFWAISSVQNSLLSMYVD-ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMF 237

Query: 161 REMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
           R+M  +  I P  V M+S++   A   DV  G+ +H  V+    D  L V    +LIDMY
Sbjct: 238 RKMVLVPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVE--NSLIDMY 295

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
           SKC +   A ++FN ++Q + VSW  M+SG++     +E   L + M +E V   E+T++
Sbjct: 296 SKCKDAGSAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLV 355

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           +++  C +       K +H  ++R G E +  + +AL+D Y KC  I  A  +F  M+ +
Sbjct: 356 NILQICKYFVHPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRR 415

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           DV+ W+ +IS +A     D+A  ++  M    V+PN +T++ LL  C+    L+  KW H
Sbjct: 416 DVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKPNVITIINLLEACSVTAELKRSKWAH 475

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
               +QG   +V + TA+VDMY+KCG++  + R F +   ++I  W+AM+A YGM+G   
Sbjct: 476 GVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAFDQLALKNIVTWSAMIAAYGMNGLAH 535

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           EAL  F +M+R G+KPN +T + +L ACSH GLV EG S+F  MV  LGL P  EHY CM
Sbjct: 536 EALALFAEMKRHGLKPNPVTTLSVLAACSHGGLVEEGLSLFKSMVQELGLEPGFEHYSCM 595

Query: 520 VDLLGRAGLLDEAHEMIKSMP--LRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           VD+LGRAG LD A E+IK+MP  L+    +WG+LL+A + +    +G+ A +++LE+EP 
Sbjct: 596 VDMLGRAGKLDTAIEVIKAMPDNLKNGASIWGSLLSACRSYGLTELGKEAISRVLELEPS 655

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           N    ++ S++YA    W+D A +R + KE  VK   G+S V ++    +F+ G
Sbjct: 656 NSAGYLVASSMYAADGLWDDAARIRVLAKEKGVKVVAGYSLVHIDNKACRFVAG 709



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 262/517 (50%), Gaps = 25/517 (4%)

Query: 49  NNKPSSALNIYAFMRKNGSE-VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAY 107
           N K    ++ Y  ++K G + VD    P ILKA + +   H GK +H   IK G D    
Sbjct: 25  NGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRH-GKSLHACLIKQGFDSFTS 83

Query: 108 VSNALIQMYSECGSLVSARYLFDEM-PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM 166
           + N+++  Y  CG    A  +F+ M  +RD VSW+ +I G+   G     L      R  
Sbjct: 84  IGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHGHLDNGALVAGLWWFTNARVA 143

Query: 167 DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV----AIATALIDMYSKC 222
              P+   M+ ++     +     G  +H  ++++      G     ++  +L+ MY   
Sbjct: 144 GFEPNISTMVLVIQACRILGTKHDGLILHGYLIKS------GFWAISSVQNSLLSMYVD- 196

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI-EENVFPSEITILSL 281
            ++  A++LF+ +++  V++W+VMI GY++  E   G+++F +M+    + P  + ++S+
Sbjct: 197 ADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVPGIEPDGVVMVSV 256

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +  C     +  G+ +H  ++  GF+  L + N+L+DMY KC++  SA  +F+ +  ++ 
Sbjct: 257 LKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSAFKVFNEISQRNN 316

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           + WN+++S +       +A  L   M+  +V  +EVT+V +L +C         K +H  
Sbjct: 317 VSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFVHPFHCKSIHCV 376

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
           + ++G E + ++ +AL+D YAKC  +  A+ +F+    RD+  W+ M++G+   G  +EA
Sbjct: 377 MIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEA 436

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLVPKIEHYG 517
           +  + +M+R  VKPN IT I LL ACS   +  E K    K  HG+    G   ++    
Sbjct: 437 IAVYQEMDRDLVKPNVITIINLLEACS---VTAELKR--SKWAHGVAIRQGFASEVTVGT 491

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            +VD+  + G +  +      + L+ N++ W A++AA
Sbjct: 492 AVVDMYSKCGEILASRRAFDQLALK-NIVTWSAMIAA 527



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 205/425 (48%), Gaps = 12/425 (2%)

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
           ++PN     W   I+     G  +E +    E++   I+  +V++   +           
Sbjct: 11  KLPN-----WILRIKESSANGKWQEVVSHYHEIKKAGIQTVDVSVFPPILKAWSFLSHRH 65

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQN-SVVSWTVMISG 249
           GK++HAC+++   D     +I  +++  Y +CG+   A  +FN + ++   VSW ++I G
Sbjct: 66  GKSLHACLIKQGFDSF--TSIGNSIMGFYIRCGDFDIAVDVFNSMRRSRDSVSWNILIHG 123

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
           ++    +  G+  F         P+  T++ +I  C  +G    G  LH Y++++GF   
Sbjct: 124 HLDNGALVAGLWWFTNARVAGFEPNISTMVLVIQACRILGTKHDGLILHGYLIKSGFWAI 183

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK- 368
            ++ N+L+ MY    ++  AR LFD M  KDV+ W+ +I  Y Q        ++F  M  
Sbjct: 184 SSVQNSLLSMYVDA-DMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVL 242

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
           V  + P+ V MV +L  C  +  +  G+ +H  +  +G + D+ ++ +L+DMY+KC D  
Sbjct: 243 VPGIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAG 302

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A+++F+E   R+   WN+M++G+ ++    EA      M +  V+ + +T + +L  C 
Sbjct: 303 SAFKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICK 362

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           +       KS+   M+       ++     ++D   +  L++ A E+   M  R +++ W
Sbjct: 363 YFVHPFHCKSIHCVMIRRGSEANELV-LSALIDAYAKCYLIEIAWEVFARMR-RRDVVSW 420

Query: 549 GALLA 553
             +++
Sbjct: 421 STMIS 425


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/598 (33%), Positives = 335/598 (56%), Gaps = 2/598 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + +LV ++ +     +A  ++  +R  G EV+ F + T+LK    +    L   +H 
Sbjct: 127 MVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHS 186

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A K G D +A+V + LI  YS C  +  A ++F+ +  +D V W+ M+  Y     PE 
Sbjct: 187 CAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPEN 246

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A  V  +MR    +P+  A+ S++     +  V LGK IH C ++   D +  V    AL
Sbjct: 247 AFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVG--GAL 304

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+KCG++  A+  F  +  + V+  + MIS Y + N+  +   LF  ++  +V P+E
Sbjct: 305 LDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNE 364

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            ++ S++  C  +  L  GK +H + ++ G E  L + NAL+D Y KC ++ S+  +F  
Sbjct: 365 YSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSS 424

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++  + + WN ++  ++Q+   ++A  +F  M+ +++   +VT   +L  C    ++   
Sbjct: 425 LRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHA 484

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H  IEK     D ++  +L+D YAKCG +  A ++F   + RDI  WNA+++GY +H
Sbjct: 485 GQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALH 544

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G   +AL  F  M +S V+ N ITF+ LL+ CS  GLV  G S+FD M    G+ P +EH
Sbjct: 545 GQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEH 604

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y C+V LLGRAG L++A + I  +P  P+ +VW ALL++  +HKN ++G  +A +ILEIE
Sbjct: 605 YTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIE 664

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGM 633
           PQ+    VL+SN+YA A   + VA +R+ M+ I V+K PG S VE+ G +H F  G +
Sbjct: 665 PQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSV 722



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 145/501 (28%), Positives = 257/501 (51%), Gaps = 24/501 (4%)

Query: 69  VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG--DAYVSNALIQMYSECGSLVSAR 126
           VD+F     L+ C        G+ +HG  ++ G  G  D + +N L+ MY + G L SAR
Sbjct: 57  VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116

Query: 127 YLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            LFD MP R++VS+ T+++ + + G  E A  + R +R+     ++  + +M+ L   + 
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMD 176

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
              L   +H+C  +   D      + + LID YS C  ++ A+ +FN + +   V WT M
Sbjct: 177 AAGLAGGVHSCAWKLGHDHN--AFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           +S Y   +      R+F++M      P+   + S++     +  + LGK +H   ++   
Sbjct: 235 VSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLN 294

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
           +    +  AL+DMY KC +I+ AR  F+ +   DV++ + +IS YAQ++  ++AFELF+ 
Sbjct: 295 DTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLR 354

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           +  S V PNE ++  +L  CT    L+ GK +H +  K G E D+ +  AL+D YAKC D
Sbjct: 355 LMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCND 414

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           ++ + ++FS     +   WN ++ G+   G GEEAL  F +M+ + +    +T+  +L A
Sbjct: 415 MDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRA 474

Query: 487 CS------HAGLV--TEGKSVFDK-MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK 537
           C+      HAG +  +  KS F+   V G            ++D   + G + +A ++ +
Sbjct: 475 CASTASIRHAGQIHCSIEKSTFNNDTVIG----------NSLIDTYAKCGYIRDALKVFQ 524

Query: 538 SMPLRPNMIVWGALLAASKLH 558
            +  R ++I W A+++   LH
Sbjct: 525 HLMER-DIISWNAIISGYALH 544



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 187/395 (47%), Gaps = 17/395 (4%)

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
           D   G+A+H  VVR     +L +  A  L++MY K G LA A++LF+R+ + ++VS+  +
Sbjct: 74  DARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTL 133

Query: 247 ISGYIRCNEINEGVRLFAEM------IEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           +  + +  +      LF  +      + + V  + + +   +   G  GG+    W    
Sbjct: 134 VQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAW---- 189

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
             + G + +  + + L+D Y  C  +  A  +F+G+  KD ++W A++S Y++  C + A
Sbjct: 190 --KLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENA 247

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
           F +F  M+VS  +PN   +  +L       ++ +GK +H    K   + +  +  AL+DM
Sbjct: 248 FRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDM 307

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           YAKCGD+  A   F    Y D+ + + M++ Y      E+A   F+ + RS V PN  + 
Sbjct: 308 YAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSL 367

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
             +L AC++   +  GK + +  +  +G    +     ++D   +   +D + ++  S+ 
Sbjct: 368 SSVLQACTNMVQLDFGKQIHNHAIK-IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLR 426

Query: 541 LRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
              N + W  ++          +GE A +   E++
Sbjct: 427 -DANEVSWNTIVVG---FSQSGLGEEALSVFCEMQ 457


>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
 gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
          Length = 1029

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/613 (32%), Positives = 353/613 (57%), Gaps = 12/613 (1%)

Query: 22  KTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC 81
           K  F FS    I     +N+++  +++N+     + ++ +MR+   E D+FT  ++L AC
Sbjct: 382 KKVFDFSTEKNI---VMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGAC 438

Query: 82  AQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWS 141
             +    +G+++H   IKN +D D +V+NA++ MYS+ G++  A+ LF  +P +D VSW+
Sbjct: 439 INLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWN 498

Query: 142 TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN 201
            +I G       EEA+ +++ M+   I P EV+  + ++  +++   + GK IH   ++ 
Sbjct: 499 ALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKY 558

Query: 202 --CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
             C +     A+ ++LID+YSK G++  ++++   ++ +S+V    +I+G ++ N  +E 
Sbjct: 559 NVCSNH----AVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEA 614

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF-EFSLAMANALVD 318
           + LF +++++   PS  T  S++  C       +GK +H+Y L++       ++  +LV 
Sbjct: 615 IELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVG 674

Query: 319 MYGKCREIRSARTLFDGMKS-KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEV 377
           +Y KC+ +  A  L   +   K+++ W A IS YAQ    D++  +F  M+   VR +E 
Sbjct: 675 IYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEA 734

Query: 378 TMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
           T   +L  C+E  AL  GK +H  I K G        +AL+DMY+KCGDV  ++ +F E 
Sbjct: 735 TFASVLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKEL 794

Query: 438 IYR-DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
             + +I  WN+M+ G+  +G   EAL+ F  M+ S +KP+ +T +G+L ACSHAGL++EG
Sbjct: 795 KNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEG 854

Query: 497 KSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
           +++FD M    G+VP+++HY C++DLLGR G L EA E+I  +P R + ++W   LAA +
Sbjct: 855 RNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQ 914

Query: 557 LHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGF 616
           +HK+   G++AA +++E+EPQ     V +S+++A A  W +    R  M+E  V K PG 
Sbjct: 915 MHKDEERGKVAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGC 974

Query: 617 SSVEVNGLVHKFI 629
           S + V    + F+
Sbjct: 975 SWITVGNKTNLFV 987



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 226/459 (49%), Gaps = 38/459 (8%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKN-GSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
           +++ + ++  P   L+ +  +R + G   D F +  +L AC+++     G+++H   +K+
Sbjct: 130 VLSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKS 189

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G    A+    L+ MY++C  +  AR +FD +   D + W++MI GYHR G  ++AL + 
Sbjct: 190 GFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALF 249

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
             M  M   P +V  ++++S  A +                                   
Sbjct: 250 SRMEKMGSAPDQVTYVTIISTLASM----------------------------------- 274

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
             G L+ A+ L  R+   S V+W  +IS Y +    +E   L+ +M  + + P+  T  S
Sbjct: 275 --GRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFAS 332

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           ++     +     G+ +HA  +++G + ++ + ++L+++Y K   I  A+ +FD    K+
Sbjct: 333 MLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKN 392

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           +++WNA++  + Q    ++  ++F +M+ + +  ++ T V +L  C    +L++G+ +H 
Sbjct: 393 IVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHC 452

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
              K  ++ D+ +  A++DMY+K G ++ A  LFS    +D   WNA++ G   +   EE
Sbjct: 453 ITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEE 512

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           A+     M+  G+ P+ ++F   +NACS+      GK +
Sbjct: 513 AVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQI 551



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/573 (24%), Positives = 264/573 (46%), Gaps = 71/573 (12%)

Query: 10  LEQTRQCHAHIIKTHFKFS-----------------------YTNIINPLTR-YNSLVTS 45
           LEQ RQ H  ++K+ F  S                       +  I  P T  + S++  
Sbjct: 176 LEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAG 235

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
           Y +  +   AL +++ M K GS  D  T  TI+   A +                     
Sbjct: 236 YHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASM--------------------- 274

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
                         G L  AR L   +     V+W+ +I  Y + GL  E   + ++M+ 
Sbjct: 275 --------------GRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKR 320

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
             + P+     SM+S  A +   D G+ IHA  V++  D    V + ++LI++Y K G +
Sbjct: 321 QGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDAN--VFVGSSLINLYVKHGCI 378

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
           + AK++F+   + ++V W  M+ G+++ +   E +++F  M   ++   + T +S++  C
Sbjct: 379 SDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGAC 438

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
             +  L +G+ +H   ++N  +  L +ANA++DMY K   I  A+ LF  +  KD + WN
Sbjct: 439 INLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWN 498

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
           A+I   A     ++A  +   MK   + P+EV+    ++ C+   A E GK +H    K 
Sbjct: 499 ALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKY 558

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
            +  +  + ++L+D+Y+K GDV  + ++ +      +   NA++ G   +   +EA+  F
Sbjct: 559 NVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELF 618

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI--EHYGCMVDLL 523
             + + G KP+  TF  +L+ C+  G V+   SV  K VH   L   +  +     + L+
Sbjct: 619 QQVLKDGFKPSNFTFASILSGCT--GPVS---SVIGKQVHSYTLKSALLNQDTSLGISLV 673

Query: 524 G---RAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           G   +  LL++A++++  +P   N++ W A ++
Sbjct: 674 GIYLKCKLLEDANKLLAEVPDHKNLVEWTATIS 706



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/364 (22%), Positives = 153/364 (42%), Gaps = 44/364 (12%)

Query: 196 ACVVRNCKDEKLGVAI----ATALIDMYSKCGNLAYAKQLFN--RLNQNSVVSWTVMISG 249
           AC V + +  +LG+ +      AL+D+Y + G + YA +          S  + + ++S 
Sbjct: 74  ACGVLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSC 133

Query: 250 YIRCNEINEGVRLFAEM-IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
           + R     + +  F  +       P +  +  ++  C  +G L+ G+ +H  +L++GF  
Sbjct: 134 HARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCS 193

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
           S      LVDMY KC E++ AR +FDG+   D + W ++I+ Y +     +A  LF  M+
Sbjct: 194 SAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRME 253

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
                P++VT V ++S     G L   + L   I+                         
Sbjct: 254 KMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPS---------------------- 291

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
                           WNA+++ Y   G   E    + DM+R G+ P   TF  +L+A +
Sbjct: 292 -------------TVAWNAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAA 338

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
                 EG+ +    V   GL   +     +++L  + G + +A ++        N+++W
Sbjct: 339 SMTAFDEGQQIHAAAVKH-GLDANVFVGSSLINLYVKHGCISDAKKVF-DFSTEKNIVMW 396

Query: 549 GALL 552
            A+L
Sbjct: 397 NAML 400



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 127/265 (47%), Gaps = 11/265 (4%)

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD--GMKSKDVMIWNAVISAYAQA 354
           LHA +LR G      + +ALVD+YG+   +  A                 ++V+S +A++
Sbjct: 78  LHARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPASGAAASSVLSCHARS 137

Query: 355 HCIDKAFELFIHMKVS-KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
                  + F  ++ S    P++  +  +LS C+  GALE G+ +H  + K G       
Sbjct: 138 GSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFC 197

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
           +  LVDMYAKC +V  A R+F      D   W +M+AGY   G  ++AL  F  ME+ G 
Sbjct: 198 QAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGS 257

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
            P+ +T++ +++  +  G +++ +++  ++      +P    +  ++    ++GL  E  
Sbjct: 258 APDQVTYVTIISTLASMGRLSDARTLLKRI-----QMPSTVAWNAVISSYSQSGLESEVF 312

Query: 534 EMIKSMP---LRPNMIVWGALLAAS 555
            + K M    L P    + ++L+A+
Sbjct: 313 GLYKDMKRQGLMPTRSTFASMLSAA 337


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 219/632 (34%), Positives = 350/632 (55%), Gaps = 47/632 (7%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           +PLT  +S   SY  +  PSS+   Y  +R + S        ++L  C  +    L   I
Sbjct: 6   SPLTVPSS---SYPFHFLPSSSDPPYDSLRNHPSL-------SLLHNCKTLQSLRL---I 52

Query: 94  HGFAIKNGLDGDAYVSNALIQM---YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           H   IK GL    Y  + L+++         L  A  +F+ +   +++ W+TM RG+   
Sbjct: 53  HAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHALS 112

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
             P  AL++   M  + + P+      ++   A       G+ IH  V++   D  L V 
Sbjct: 113 SDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVH 172

Query: 211 IA-----------------------------TALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
            +                             TALI  Y+  G +  A++LF+ +    VV
Sbjct: 173 TSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVV 232

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           SW  MISGY       E + LF EM++ N+ P E T+++++  C   G ++LG+ +H++I
Sbjct: 233 SWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQVHSWI 292

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
             +GF  +L + N+L+D+Y KC E+ +A  LF+G+  KDV+ WN +I  Y   +   +A 
Sbjct: 293 DDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNLYKEAL 352

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK--QGLEVDVILKTALVD 419
            LF  M  S  RPN+VTM+ +L  C   GA+++G+W+H YI+K  +       L+T+L+D
Sbjct: 353 LLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLID 412

Query: 420 MYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGIT 479
           MYAKCGD+  A+++F+  +++ +  WNAM+ G+ MHG  + A   F  M + G++P+ IT
Sbjct: 413 MYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDIT 472

Query: 480 FIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM 539
           F+GLL+ACS +G++  G+ +F  M     + PK+EHYGCM+DLLG +GL  EA EMI +M
Sbjct: 473 FVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNM 532

Query: 540 PLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVA 599
            + P+ ++W +LL A K+  N  +GE  A  +++IEP+N G  VL+SNIYA A RWN+VA
Sbjct: 533 EMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRWNEVA 592

Query: 600 GVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            +R ++ +  +KK PG SS+E++ +VH+FI G
Sbjct: 593 KIRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 624



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 170/320 (53%), Gaps = 2/320 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +N++++ Y +      AL ++  M K     D  T+ T++ ACAQ     LG++
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQ 287

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H +   +G   +  + N+L+ +YS+CG L +A  LF+ +  +DV+SW+T+I GY    L
Sbjct: 288 VHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNL 347

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            +EAL + +EM     RP++V M+S++   A +  +D+G+ IH  + +  K      ++ 
Sbjct: 348 YKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLR 407

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T+LIDMY+KCG++  A Q+FN +   S+ SW  MI G+      +    +F+ M +  + 
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIE 467

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSART 331
           P +IT + L+  C   G L LG+ +   + ++      L     ++D+ G     + A  
Sbjct: 468 PDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEE 527

Query: 332 LFDGMK-SKDVMIWNAVISA 350
           + + M+   D +IW +++ A
Sbjct: 528 MINNMEMEPDGVIWCSLLKA 547


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  392 bits (1006), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/601 (34%), Positives = 349/601 (58%), Gaps = 16/601 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL+T Y  N        ++  M+  G   D +T+ T++ A A      +G +IH   +
Sbjct: 171 WNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVV 230

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G + +  V N+LI M S+ G L  AR +FD M N+D VSW++MI G+   G   EA E
Sbjct: 231 KLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFE 290

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATA 214
               M+    +P+     S++   A + ++ L + +H      CK  K G++    + TA
Sbjct: 291 TFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLH------CKTLKSGLSTNQNVLTA 344

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQ-NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           L+   +KC  +  A  LF+ ++   SVVSWT MISGY++  + ++ V LF+ M  E V P
Sbjct: 345 LMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKP 404

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +  T  +++     V        +HA +++  +E S ++  AL+D + K   I  A  +F
Sbjct: 405 NHFTYSTILT----VQHAVFISEIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVF 460

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA-L 392
           + +++KDV+ W+A+++ YAQA   ++A ++F  +    ++PNE T   +++ CT   A +
Sbjct: 461 ELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASV 520

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           E GK  H Y  K  L   + + ++LV +YAK G++  A+ +F     RD+  WN+M++GY
Sbjct: 521 EQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGY 580

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             HG  ++AL  F +M++  ++ + ITFIG+++AC+HAGLV +G++ F+ M++   + P 
Sbjct: 581 AQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPT 640

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           +EHY CM+DL  RAG+L +A ++I  MP  P   VW  +LAAS++H+N  +G++AA +I+
Sbjct: 641 MEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKII 700

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
            +EPQ+    VL+SNIYA A  W++   VR++M + RVKKEPG+S +EV    + F+ G 
Sbjct: 701 SLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNKTYSFLAGD 760

Query: 633 M 633
           +
Sbjct: 761 L 761



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 154/528 (29%), Positives = 264/528 (50%), Gaps = 10/528 (1%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L ++N L+  Y + ++   AL+++  + ++G   D++T+  +L  CA      +G++
Sbjct: 64  LRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQ 123

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H   +K GL     V N+L+ MY++ G++   R +FDEM +RDVVSW++++ GY     
Sbjct: 124 VHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRF 183

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAI 211
            ++  E+   M+    RP    + ++++  A+   V +G  IHA VV+   + E+L   +
Sbjct: 184 NDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERL---V 240

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
             +LI M SK G L  A+ +F+ +     VSW  MI+G++   +  E    F  M     
Sbjct: 241 CNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGA 300

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P+  T  S+I  C  +  L L + LH   L++G   +  +  AL+    KC+EI  A +
Sbjct: 301 KPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFS 360

Query: 332 LFDGMKS-KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
           LF  M   + V+ W A+IS Y Q    D+A  LF  M+   V+PN  T   +L++     
Sbjct: 361 LFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVF 420

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
             E    +H  + K   E    + TAL+D + K G+++ A ++F     +D+  W+AM+A
Sbjct: 421 ISE----IHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLA 476

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           GY   G  EEA   F  + R G+KPN  TF  ++NAC+      E    F      L L 
Sbjct: 477 GYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLN 536

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             +     +V L  + G ++ AHE+ K    R +++ W ++++    H
Sbjct: 537 NALCVSSSLVTLYAKRGNIESAHEIFKRQKER-DLVSWNSMISGYAQH 583



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 219/439 (49%), Gaps = 27/439 (6%)

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           A+ LFD+ P RD+   + ++  Y R    +EAL +   +    + P    M  ++S+ A 
Sbjct: 55  AQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCAG 114

Query: 185 VADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
             +  +G+ +H      C+  K G    +++  +L+DMY+K GN+   +++F+ +    V
Sbjct: 115 SFNGTVGEQVH------CQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDV 168

Query: 241 VSWTVMISGYIRCNEINEGV-RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
           VSW  +++GY   N  N+ V  LF  M  E   P   T+ ++I      G + +G  +HA
Sbjct: 169 VSWNSLLTGY-SWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHA 227

Query: 300 YILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
            +++ GFE    + N+L+ M  K   +R AR +FD M++KD + WN++I+ +       +
Sbjct: 228 LVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLE 287

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVD 419
           AFE F +M+++  +P   T   ++  C     L + + LH    K GL  +  + TAL+ 
Sbjct: 288 AFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMV 347

Query: 420 MYAKCGDVNGAYRLFSEAI-YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
              KC +++ A+ LFS     + +  W AM++GY  +G  ++A+  F  M R GVKPN  
Sbjct: 348 ALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHF 407

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG----CMVDLLGRAGLLDEAHE 534
           T+  +L    HA  ++E        +H   +    E        ++D   + G + +A +
Sbjct: 408 TYSTILTV-QHAVFISE--------IHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVK 458

Query: 535 MIKSMPLRPNMIVWGALLA 553
           + + +  + ++I W A+LA
Sbjct: 459 VFELIETK-DVIAWSAMLA 476



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 171/327 (52%), Gaps = 9/327 (2%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           FS  + +  +  + ++++ Y++N     A+N+++ MR+ G + ++FT  TIL     V +
Sbjct: 362 FSLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHAVFI 421

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
           +    EIH   IK   +  + V  AL+  + + G++  A  +F+ +  +DV++WS M+ G
Sbjct: 422 S----EIHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAG 477

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMV-SLFADVADVDLGKAIHACVVRNCKDE 205
           Y + G  EEA ++  ++    I+P+E    S++ +  A  A V+ GK  HA  ++   + 
Sbjct: 478 YAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIKLRLNN 537

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
            L   ++++L+ +Y+K GN+  A ++F R  +  +VSW  MISGY +  +  + + +F E
Sbjct: 538 AL--CVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEE 595

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGK-WLHAYILRNGFEFSLAMANALVDMYGKCR 324
           M + N+    IT + +I  C   G +  G+ + +  I  +    ++   + ++D+Y +  
Sbjct: 596 MQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAG 655

Query: 325 EIRSARTLFDGMK-SKDVMIWNAVISA 350
            +  A  + +GM       +W  V++A
Sbjct: 656 MLGKAMDIINGMPFPPAATVWRIVLAA 682



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 138/262 (52%)

Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
           +A+QLF++     +     ++  Y RC++  E + LF  +    + P   T+  ++  C 
Sbjct: 54  FAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCA 113

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
                 +G+ +H   ++ G    L++ N+LVDMY K   +R  R +FD M  +DV+ WN+
Sbjct: 114 GSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNS 173

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           +++ Y+     D+ +ELF  M+V   RP+  T+  +++     GA+ +G  +H  + K G
Sbjct: 174 LLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLG 233

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
            E + ++  +L+ M +K G +  A  +F     +D   WN+M+AG+ ++G   EA   F 
Sbjct: 234 FETERLVCNSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFN 293

Query: 467 DMERSGVKPNGITFIGLLNACS 488
           +M+ +G KP   TF  ++ +C+
Sbjct: 294 NMQLAGAKPTHATFASVIKSCA 315



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 113/227 (49%), Gaps = 2/227 (0%)

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
           R A+ LFD    +D+   N ++  Y++     +A  LF+ +  S + P+  TM  +LS+C
Sbjct: 53  RFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVC 112

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
             +    +G+ +H    K GL   + +  +LVDMY K G+V    R+F E   RD+  WN
Sbjct: 113 AGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWN 172

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           +++ GY  +   ++    F  M+  G +P+  T   ++ A ++ G V  G  +   +V  
Sbjct: 173 SLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIH-ALVVK 231

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           LG   +      ++ +L ++G+L +A  +  +M    + + W +++A
Sbjct: 232 LGFETERLVCNSLISMLSKSGMLRDARVVFDNME-NKDSVSWNSMIA 277



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 90/188 (47%), Gaps = 9/188 (4%)

Query: 412 ILKTALVDMYAKC----GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
           +L++ +V + A+      D   A +LF +   RD+   N ++  Y      +EAL  FV 
Sbjct: 33  LLQSHVVALNARTLLRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVS 92

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           + RSG+ P+  T   +L+ C+ +   T G+ V  + V   GLV  +     +VD+  + G
Sbjct: 93  LYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCV-KCGLVHHLSVGNSLVDMYTKTG 151

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHK-NPSMGEIAATQILEIEPQNYGYNVLMS 586
            + +   +   M  R +++ W +LL     ++ N  + E+    ++++E     Y  + +
Sbjct: 152 NVRDGRRVFDEMGDR-DVVSWNSLLTGYSWNRFNDQVWELFC--LMQVEGYRPDYYTVST 208

Query: 587 NIYAVANR 594
            I A+AN+
Sbjct: 209 VIAALANQ 216


>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g39620-like [Glycine max]
          Length = 887

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/582 (34%), Positives = 323/582 (55%), Gaps = 3/582 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++  Y+ +      L +   M++   +++  ++   + A  +      GKE+H +A+
Sbjct: 296 WATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYAL 355

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G+  D  V+  ++ MY++CG L  A+  F  +  RD+V WS  +    + G P EAL 
Sbjct: 356 QLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALS 415

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + +EM+   ++P +  + S+VS  A+++   LGK +H  V++   D    +++AT L+ M
Sbjct: 416 IFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIK--ADMGSDISVATTLVSM 473

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y++C +  YA  LFNR++   VV+W  +I+G+ +C +    + +F  +    V P   T+
Sbjct: 474 YTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTM 533

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +SL+  C  +  L LG   H  I++NG E  + +  AL+DMY KC  + +A  LF   K 
Sbjct: 534 VSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKH 593

Query: 339 -KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KD + WN +I+ Y    C ++A   F  MK+  VRPN VT V +L   +    L     
Sbjct: 594 VKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPAVSYLSILREAMA 653

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
            H  I + G     ++  +L+DMYAK G ++ + + F E   +    WNAM++GY MHG 
Sbjct: 654 FHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISWNAMLSGYAMHGQ 713

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           GE AL  F  M+ + V  + +++I +L+AC HAGL+ EG+++F  M     L P +EHY 
Sbjct: 714 GEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYA 773

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLLG AGL DE   +I  MP  P+  VWGALL A K+H N  +GEIA   +L++EP+
Sbjct: 774 CMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNVKLGEIALHHLLKLEPR 833

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           N  + +++S+IYA   RW D    R  M +  +KK PG+S V
Sbjct: 834 NAVHYIVLSDIYAQCGRWIDARRTRSNMTDHGLKKNPGYSWV 875



 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 154/476 (32%), Positives = 262/476 (55%), Gaps = 6/476 (1%)

Query: 15  QCHAHIIKTHFKFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT 73
           Q HA +I      +  +I NP L  +NSL+ +Y + +    A+  Y  M   G E D +T
Sbjct: 70  QIHARLIVQQCTLAPNSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYT 129

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
              +LKAC   L  H G  IH       L+ D ++   L+ MY + G L +AR +FD+MP
Sbjct: 130 FTFVLKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMP 189

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGK 192
            +DV SW+ MI G  +   P EALE+ + M+  + + P  V+++++    + + DVD  K
Sbjct: 190 GKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCK 249

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
           +IH  VVR C     GV ++ +LIDMYSKCG +  A Q+F+++     +SW  M++GY+ 
Sbjct: 250 SIHGYVVRRCV---FGV-VSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVH 305

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
                E ++L  EM  +++  ++I++++ ++       L+ GK +H Y L+ G    + +
Sbjct: 306 HGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVV 365

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
           A  +V MY KC E++ A+  F  ++ +D+++W+A +SA  QA    +A  +F  M+   +
Sbjct: 366 ATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGL 425

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR 432
           +P++  +  L+S C E  +  +GK +H Y+ K  +  D+ + T LV MY +C     A  
Sbjct: 426 KPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMT 485

Query: 433 LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
           LF+   Y+D+  WN ++ G+   G    AL  F+ ++ SGV+P+  T + LL+AC+
Sbjct: 486 LFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACA 541


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 198/535 (37%), Positives = 314/535 (58%), Gaps = 31/535 (5%)

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           +F  +   + +SW+TMIRG+     P  AL +   M  + + P+      +    A    
Sbjct: 34  VFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKA 93

Query: 188 VDLGKAIHACVVRNCKDEKLGVAIA-----------------------------TALIDM 218
              GK IHA +++      L V  +                             TA+I  
Sbjct: 94  AQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITG 153

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+  GN+  A+++F+ +    VVSW  MISGY       E + LF EM++ +V P E T+
Sbjct: 154 YASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTM 213

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            +++  C   G ++LG+ +H++I  +GF  +L + NAL+D+Y KC E+  A  LF+G++ 
Sbjct: 214 ATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQY 273

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KDV+ WN +I  YA  +   +A  +F  M      PN+VTM+ +L  C   GA+++G+W+
Sbjct: 274 KDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWI 333

Query: 399 HTYIEKQ--GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
           H YI+K+  G+  +  L+T+L+DMYAKCG++  A ++F   + + +   NAM+ G+ MHG
Sbjct: 334 HVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHG 393

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             + A      M++ G++P+ ITF+GLL+ACSHAGL   G+ +F  M     + PK+EHY
Sbjct: 394 RADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHY 453

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
           GCM+DLLGR+GL  EA E+I SM + P+ ++WG+LL A K+HKN  +GE+ A ++++IEP
Sbjct: 454 GCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQKLMKIEP 513

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +N G  VL+SNIYA + RW+DVA VR ++ +  +KK PG SS+E++ +VH+F+ G
Sbjct: 514 KNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLIG 568



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 149/482 (30%), Positives = 244/482 (50%), Gaps = 68/482 (14%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  +  ++ P SALN+Y +M   G   +++T P + K+CA+      GK+IH   +
Sbjct: 46  WNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQIL 105

Query: 99  KNGLDGDAYVSNALIQMYSEC-------------------------------GSLVSARY 127
           K GL  D +V  +LI MY++                                G++  A+ 
Sbjct: 106 KYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQK 165

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           +FDE+P +DVVSW+ MI GY   G  +EALE+  EM  MD++P E  M +++S      +
Sbjct: 166 MFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGN 225

Query: 188 VDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           V+LG+ IH+ +  +     L   +  ALID+YSKCG +  A  LF  L    V+SW  +I
Sbjct: 226 VELGRQIHSWIDNHGFGSNL--KLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLI 283

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR--NG 305
            GY   N   E + +F EM++    P+++T+LS++  C  +G + +G+W+H YI +   G
Sbjct: 284 GGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKG 343

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
              + ++  +L+DMY KC  I +A  +FD + +K +   NA+I  +A     D AF+L  
Sbjct: 344 IITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLS 403

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            MK   + P+++T VGLLS C+ AG  ++G+ +      + + +D  ++  L + Y    
Sbjct: 404 RMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIF-----KSMTLDYRIEPKL-EHYGCMI 457

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
           D+ G   LF EA                      E LI  + ME     P+G+ +  LL 
Sbjct: 458 DLLGRSGLFKEA----------------------EELINSMTME-----PDGVIWGSLLK 490

Query: 486 AC 487
           AC
Sbjct: 491 AC 492



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 176/349 (50%), Gaps = 36/349 (10%)

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           L YA  +F  + + + +SW  MI G+   ++    + L+  MI   + P+  T   L   
Sbjct: 28  LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC---------------REIRS- 328
           C      Q GK +HA IL+ G    L +  +L+ MY +                R++ S 
Sbjct: 88  CAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSY 147

Query: 329 ---------------ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
                          A+ +FD +  KDV+ WNA+IS YA+     +A ELF  M    V+
Sbjct: 148 TAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVK 207

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           P+E TM  +LS CT +G +E+G+ +H++I+  G   ++ L  AL+D+Y+KCG++  A+ L
Sbjct: 208 PDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGL 267

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F    Y+D+  WN ++ GY      +EAL+ F +M + G  PN +T + +L AC+H G +
Sbjct: 268 FEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAI 327

Query: 494 TEGKSV---FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM 539
             G+ +    DK +   G++        ++D+  + G ++ A+++  ++
Sbjct: 328 DIGRWIHVYIDKKLK--GIITNTSLQTSLIDMYAKCGNIEAANQVFDTI 374



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 177/356 (49%), Gaps = 8/356 (2%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I  +  +N++++ Y +  +   AL ++  M K   + D  T+ T+L  C       LG++
Sbjct: 172 IKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQ 231

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IH +   +G   +  + NALI +YS+CG +  A  LF+ +  +DV+SW+T+I GY     
Sbjct: 232 IHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKDVISWNTLIGGYAYINH 291

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            +EAL V +EM  +   P++V M+S++   A +  +D+G+ IH  + +  K      ++ 
Sbjct: 292 HKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQ 351

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T+LIDMY+KCGN+  A Q+F+ +   S+ S   MI G+      +    L + M ++ + 
Sbjct: 352 TSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIE 411

Query: 273 PSEITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
           P +IT + L+  C   G   LG K   +  L    E  L     ++D+ G+    + A  
Sbjct: 412 PDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEE 471

Query: 332 LFDGMK-SKDVMIWNAVISAYAQAHCIDKAFEL--FIHMKVSKVRPNEVTMVGLLS 384
           L + M    D +IW +++ A      I K  EL   I  K+ K+ P       LLS
Sbjct: 472 LINSMTMEPDGVIWGSLLKACK----IHKNLELGELIAQKLMKIEPKNPGSYVLLS 523



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 123/258 (47%), Gaps = 35/258 (13%)

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           A ++F  ++  + + WN +I  +A +     A  L+++M    + PN  T   L   C +
Sbjct: 31  AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-------- 440
           + A + GK +H  I K GL VD+ + T+L+ MYA+ G V  A+++F  + +R        
Sbjct: 91  SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150

Query: 441 -----------------------DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
                                  D+  WNAM++GY   G  +EAL  F +M +  VKP+ 
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
            T   +L+ C+H+G V  G+ +   +  HG G   K+     ++DL  + G ++ AH + 
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKL--VNALIDLYSKCGEMERAHGLF 268

Query: 537 KSMPLRPNMIVWGALLAA 554
           + +  + ++I W  L+  
Sbjct: 269 EGLQYK-DVISWNTLIGG 285


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 200/499 (40%), Positives = 309/499 (61%), Gaps = 6/499 (1%)

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREM--RFMDIRPSEVAMISMVSLFADVADVDLGKA 193
           DV++W++M+R +    +P  AL+   EM  R  ++ P      S++   A + +  +GK 
Sbjct: 42  DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNV-PDRFTFPSLLKGCALLLEFKVGKV 100

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           +H  VV+      L   I T L++MY+ CG+L  A+ LF R+   + V WT MISGY++ 
Sbjct: 101 LHGQVVKYMLHSDL--YIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKN 158

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
           +  NE + L+ +M E+   P E+T+ +L+  C  +  L +G  LH++I     +    + 
Sbjct: 159 HCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLG 218

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV-SKV 372
           +ALV+MY KC ++++AR +FD +  KDV  W+A+I  Y + +   +A +LF  +   S +
Sbjct: 219 SALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNM 278

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR 432
           RPNEVT++ ++S C + G LE G+W+H YI +      V L  +L+DM++KCGD++ A R
Sbjct: 279 RPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKR 338

Query: 433 LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL 492
           +F    Y+D+  WN+M+ G  +HG G EAL  F  M+ + ++P+ ITFIG+L ACSHAGL
Sbjct: 339 IFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGL 398

Query: 493 VTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           V EGK +F ++    G+  K EHYGCMVDLL RAGLL EA E I+ MPL+P+  +WG++L
Sbjct: 399 VQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSML 458

Query: 553 AASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKK 612
            A +++ N  +GE AA  +LE+EP N G  +L+SNIYA    WN+V  VR +M E  ++K
Sbjct: 459 GACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVRELMNEKGIQK 518

Query: 613 EPGFSSVEVNGLVHKFIRG 631
            PG SSV ++ + H F+ G
Sbjct: 519 TPGCSSVVIDNIAHSFLAG 537



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 159/484 (32%), Positives = 276/484 (57%), Gaps = 14/484 (2%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVL 85
           F++T +++ LT +NS++ +++ +N P  AL  Y  M +    V D FT P++LK CA +L
Sbjct: 35  FAHTRVLDVLT-WNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLL 93

Query: 86  MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIR 145
              +GK +HG  +K  L  D Y+   L+ MY+ CG L SAR+LF+ M +R+ V W++MI 
Sbjct: 94  EFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMIS 153

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           GY +   P EAL + ++M      P EV M ++VS  A++ D+ +G  +H+ +     D 
Sbjct: 154 GYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIRE--MDM 211

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           K+   + +AL++MY+KCG+L  A+Q+F++L+   V +W+ +I GY++ N   E ++LF E
Sbjct: 212 KICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFRE 271

Query: 266 MI-EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           +    N+ P+E+TIL++I  C  +G L+ G+W+H YI R     S+++ N+L+DM+ KC 
Sbjct: 272 VAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCG 331

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
           +I +A+ +FD M  KD++ WN++++  A      +A   F  M+ + ++P+E+T +G+L+
Sbjct: 332 DIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLT 391

Query: 385 LCTEAGALEMGKWLHTYIEK-QGLEVDVILKTALVDMYAKCGDVNGAYRLFS-EAIYRDI 442
            C+ AG ++ GK L   IE   G+ +       +VD+  + G +  A        +  D 
Sbjct: 392 ACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDG 451

Query: 443 CMWNAMMAG---YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
            +W +M+     Y     GEEA    +++E +    N   +I L N  +   +  E K V
Sbjct: 452 AIWGSMLGACRVYNNLELGEEAARCLLELEPT----NDGVYILLSNIYARRKMWNEVKKV 507

Query: 500 FDKM 503
            + M
Sbjct: 508 RELM 511


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 211/572 (36%), Positives = 339/572 (59%), Gaps = 14/572 (2%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL-DGDAYVSNALIQMYSECGSLVSARYL 128
           D FT P +L+A AQ   T    ++H  A++ GL  GDA+ S AL+  Y   G +  A   
Sbjct: 70  DAFTFPPLLRA-AQGPGT--AAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRA 126

Query: 129 FDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV 188
           FDEM +RDV +W+ M+ G  R     EA+ +   M    +    V + S++ +   + D 
Sbjct: 127 FDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDR 186

Query: 189 DLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
            L  A+H   V++  D++L V    A+ID+Y K G L   +++F+ ++   +V+W  +IS
Sbjct: 187 ALALAMHLYAVKHGLDDELFVC--NAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIIS 244

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSL---IIECGFVGGLQLGKWLHAYILRNG 305
           G+ +  ++   V +F  M +  V P  +T+LSL   I +CG + G   G+ +H Y++R G
Sbjct: 245 GHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICG---GRSVHCYMVRRG 301

Query: 306 FEFSLAMA-NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
           ++    +A NA+VDMY K  +I +A+ +FD M  +D + WN +I+ Y Q     +A  ++
Sbjct: 302 WDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVY 361

Query: 365 IHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
            HM K   ++P + T V +L   +  GAL+ G  +H    K GL +DV + T ++D+YAK
Sbjct: 362 DHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAK 421

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
           CG ++ A  LF +   R    WNA+++G G+HG G +AL  F  M++ G+ P+ +TF+ L
Sbjct: 422 CGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSL 481

Query: 484 LNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           L ACSHAGLV +G++ F+ M    G+ P  +HY CMVD+ GRAG LD+A + I++MP++P
Sbjct: 482 LAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKP 541

Query: 544 NMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRR 603
           +  +WGALL A ++H N  MG++A+  + E++P+N GY VLMSN+YA   +W+ V  VR 
Sbjct: 542 DSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRS 601

Query: 604 VMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
           +++   ++K PG+SS+EV   V+ F  G  +N
Sbjct: 602 LVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMN 633


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 218/651 (33%), Positives = 348/651 (53%), Gaps = 64/651 (9%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           + +P   +N LV ++I+  +   A+ +   M + G++ D+FT+P  LKAC ++     G 
Sbjct: 110 VPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGS 169

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR---DVVSWSTMIRGYH 148
             HG    NG + + +V NAL+ MYS  GSL  A  +FDE+  +   DV+SW++++  + 
Sbjct: 170 AFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHV 229

Query: 149 RGGLPEEALEVMREM------RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           +G  P  AL++  EM      +  + R   +++++++   A +  +   K IH+  +RN 
Sbjct: 230 KGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRN- 288

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
                   +  ALID Y+KCG++  A  +FN +    VVSW  M++GY +  +      L
Sbjct: 289 -GTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFEL 347

Query: 263 FAEMIEENVF-----------------------------------PSEITILSLIIECGF 287
           F  M +EN+                                    P+ +TI+SL+  C  
Sbjct: 348 FKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACAS 407

Query: 288 VGGLQLGKWLHAYILRNGF------------EFSLAMANALVDMYGKCREIRSARTLFDG 335
           +G L  G   HAY L+                  L + NAL+DMY KCR  ++ART+F+ 
Sbjct: 408 LGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNS 467

Query: 336 M--KSKDVMIWNAVISAYAQAHCIDKAFELFIHM--KVSKVRPNEVTMVGLLSLCTEAGA 391
           +  + ++V+ W  +I  YAQ    + A +LF  M  K   V PN  T+  +L  C    +
Sbjct: 468 IPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSS 527

Query: 392 LEMGKWLHTYIEKQG-LEVDV-ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           L MGK +H Y+ +    E  V  +   L+DMY+KCGDV+ A  +F     R+   W +MM
Sbjct: 528 LRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMM 587

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           +GYGMHG G+EAL  F  M+++G  P+ I+F+ LL ACSH+G+V +G   FD M    G+
Sbjct: 588 SGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGV 647

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
           +   +HY C++DLL R+G LD+A + I+ MP+ P+  +W ALL+A ++H N  + E A  
Sbjct: 648 IASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALN 707

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
           +++ ++ +N G   L+SNIYA A RW DVA +R++MK+  +KK PG S V+
Sbjct: 708 KLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQ 758



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 140/575 (24%), Positives = 244/575 (42%), Gaps = 87/575 (15%)

Query: 65  NGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL---------------DGDAYVS 109
            G +V      ++LK C  V   +  ++IH   I  GL                  +YVS
Sbjct: 25  TGRDVSPTHFASLLKECRSV---NTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVS 81

Query: 110 -----NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
                  ++  Y  CG+   A  + + +     V W+ ++R +   G  + A+ V   M 
Sbjct: 82  PKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRML 141

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
               +P    +   +    ++     G A H  +   C   +  V +  AL+ MYS+ G+
Sbjct: 142 RAGTKPDHFTLPYALKACGELPSYRSGSAFHGLIC--CNGFESNVFVCNALVAMYSRSGS 199

Query: 225 LAYAKQLFNRLNQ---NSVVSWTVMISGYIRCNEINEGVRLFAEMIE------ENVFPSE 275
           L  A  +F+ + +   + V+SW  +++ +++ +     + LF+EM         N     
Sbjct: 200 LEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDI 259

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           I+I++++  C  +  L   K +H+Y +RNG      + NAL+D Y KC  ++ A  +F+ 
Sbjct: 260 ISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNV 319

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV----------------------- 372
           M+ KDV+ WNA+++ Y Q+     AFELF +M+   +                       
Sbjct: 320 MEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEA 379

Query: 373 ------------RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL------------E 408
                        PN VT++ LLS C   GAL  G   H Y  K+ L             
Sbjct: 380 LDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDG 439

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD--ICMWNAMMAGYGMHGCGEEALIFFV 466
            D+++  AL+DMY+KC     A  +F+    R+  +  W  M+ GY  +G   +AL  F 
Sbjct: 440 EDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFS 499

Query: 467 DM--ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG-CMVDLL 523
           +M  +   V PN  T   +L AC+H   +  GK +   +         +     C++D+ 
Sbjct: 500 EMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMY 559

Query: 524 GRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            + G +D A  +  SMP R N + W ++++   +H
Sbjct: 560 SKCGDVDTARNVFDSMPKR-NEVSWTSMMSGYGMH 593



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 185/388 (47%), Gaps = 59/388 (15%)

Query: 31  NIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           NI   +  +++++  Y +      AL+ +  M   GSE ++ TI ++L ACA +     G
Sbjct: 355 NIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQG 414

Query: 91  KEIHGFAIKNGL------------DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD-- 136
            E H +++K  L              D  V NALI MYS+C S  +AR +F+ +P R+  
Sbjct: 415 METHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERN 474

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREM--RFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           VV+W+ MI GY + G   +AL++  EM  +   + P+   +  ++   A ++ + +GK I
Sbjct: 475 VVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQI 534

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
           HA V R+ + E     +A  LIDMYSKCG++  A+ +F+ + + + VSWT M+SGY    
Sbjct: 535 HAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHG 594

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
              E + +F +M +    P +I+ L L+  C            H+ ++  G ++      
Sbjct: 595 RGKEALDIFDKMQKAGFVPDDISFLVLLYACS-----------HSGMVDQGLDY------ 637

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNA-----VISAYAQAHCIDKAFELFIHMKV 369
                             FD M+S   +I +A     VI   A++  +DKA++    M  
Sbjct: 638 ------------------FDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEM-- 677

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKW 397
             + P+    V LLS C     +E+ ++
Sbjct: 678 -PMEPSAAIWVALLSACRVHSNVELAEY 704


>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
 gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
 gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
          Length = 767

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 215/593 (36%), Positives = 346/593 (58%), Gaps = 12/593 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKN----GSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           + ++++  + N +    L+    M ++    G+  ++ T+ + L+AC  +    +G  +H
Sbjct: 179 WTAVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLH 238

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           GF +K G+     V ++L  MY++C S   AR LF E+P +D+VSW+++I  Y R G  E
Sbjct: 239 GFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAE 298

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIAT 213
           +A+E+   M    ++P EV +  +++   + A V  GK  HA +VR N  D    V I  
Sbjct: 299 KAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDS---VLIGN 355

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI--EENV 271
           ALI MY+KC  +  A  +F  L+Q    SW+ M+  Y +     + + L+ EM   +++ 
Sbjct: 356 ALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDE 415

Query: 272 FPSEITILSLIIECGF-VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           F  +   L  II     +G L+LG+  H Y +++    + ++ANAL+ MYG+C     AR
Sbjct: 416 FEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVAR 475

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +F  +K+KDV+ W+A+IS+Y+       A  L+  M    V+PN  T+V ++S C    
Sbjct: 476 KIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLA 535

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           ALE G+ +H++++  GLE D+ + TALVDMY KCG +  A ++F   + RD+  WN M++
Sbjct: 536 ALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMIS 595

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           GYGMHG   +AL  F  MER  VKPN +TF+ +L+AC HAGLV +G+ +F +M     L 
Sbjct: 596 GYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRMEE-YSLE 654

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           P ++HY CMVDLLG++G L EA +++ +MP+ P+  +WG LL A K+H N  MG   A +
Sbjct: 655 PNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKK 714

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
               +P+N GY +LMSN Y  A +WN++  +R +MK   V+K  G+S++++ G
Sbjct: 715 AFASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTIDICG 767



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 155/534 (29%), Positives = 273/534 (51%), Gaps = 22/534 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL+ S  + +  +S L+ +  MR +G+    FT P +  A A++    +G  +H +++
Sbjct: 75  WNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSV 134

Query: 99  KNGL---DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + GL   DG   V+++L+ MY+ CGS+  A  LFDEMP RDVV+W+ +I G    G   E
Sbjct: 135 RFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGE 194

Query: 156 AL----EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV-- 209
            L     ++R       RP+   M S +     + ++ +G  +H   V      K GV  
Sbjct: 195 GLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGFGV------KAGVGH 248

Query: 210 --AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
             ++ ++L  MY+KC +   A+ LF  L +  +VSWT +I  Y R     + V LF  M 
Sbjct: 249 CPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGME 308

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
           E  + P E+ I  L+   G    ++ GK  HA I+R  F  S+ + NAL+ MY KC+++ 
Sbjct: 309 ESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVD 368

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEV---TMVGLLS 384
            A T+F  +  +D   W++++ AY +A    K  EL+  M+       E    +++ ++S
Sbjct: 369 IAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIIS 428

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
            C+  G L +G+  H Y  K     +  +  AL+ MY +CG+ + A ++F     +D+  
Sbjct: 429 SCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVT 488

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           W+A+++ Y   G  ++AL+ +  M   GVKPN  T + ++++C++   +  G+ +    V
Sbjct: 489 WSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAALEHGE-LIHSHV 547

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             +GL   +     +VD+  + G L  A +M  SM L  +++ W  +++   +H
Sbjct: 548 KDVGLECDLSICTALVDMYMKCGQLGIARKMFDSM-LERDVVTWNVMISGYGMH 600



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 220/424 (51%), Gaps = 6/424 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + SL+ +Y +      A+ ++  M ++G + D   I  +L           GK  H 
Sbjct: 281 LVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHA 340

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             ++        + NALI MY++C  +  A  +F  +  RD  SWS+M+  Y + GL  +
Sbjct: 341 AIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLK 400

Query: 156 ALEVMREMRFMDIRPSEV---AMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            LE+ REM+F D    E    ++IS++S  + +  + LG++ H   +++   E    ++A
Sbjct: 401 CLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGEN--SSVA 458

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            ALI MY +CGN   A+++F  +    VV+W+ +IS Y       + + L+ +M+ E V 
Sbjct: 459 NALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVK 518

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P+  T++S+I  C  +  L+ G+ +H+++   G E  L++  ALVDMY KC ++  AR +
Sbjct: 519 PNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKM 578

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FD M  +DV+ WN +IS Y       +A +LF  M+   V+PN +T + +LS C  AG +
Sbjct: 579 FDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLV 638

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAG 451
           + G+ L T +E+  LE ++     +VD+  K G +  A  + S   I  D  +W  ++  
Sbjct: 639 DKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGA 698

Query: 452 YGMH 455
             MH
Sbjct: 699 CKMH 702



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 190/382 (49%), Gaps = 5/382 (1%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H  A+ +GL      +  L+  YS  G    A   F   P  D   W++++R  HR   
Sbjct: 28  LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG-VAI 211
               L   R MR    RPS      + S  A++  + +G A+HA  VR    E  G VA+
Sbjct: 88  FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-- 269
           A++L+ MY++CG++  A +LF+ + +  VV+WT +ISG +   +  EG+     M+    
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207

Query: 270 --NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
                P+  T+ S +  CG +G L +G  LH + ++ G     ++ ++L  MY KC    
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            AR LF  +  KD++ W ++I AY +A   +KA ELF+ M+ S ++P+EV +  LL+   
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
               +  GK  H  I ++     V++  AL+ MYAKC  V+ A  +F     RD   W++
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSS 387

Query: 448 MMAGYGMHGCGEEALIFFVDME 469
           M+  Y   G   + L  + +M+
Sbjct: 388 MVVAYCKAGLDLKCLELYREMQ 409


>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 216/640 (33%), Positives = 351/640 (54%), Gaps = 19/640 (2%)

Query: 2   KIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAF 61
           +I N  +NL    +C +H  K +  F   N  + ++ +N L+ ++ +    + +L++   
Sbjct: 46  QIANSLINL--YAKC-SHFSKANLVFDSINNKDVVS-WNCLINAFSQQQAHAPSLHVMHL 101

Query: 62  MRK----NGSEVDN-FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMY 116
            R+    + + V N  T+  +  A + +  +  G++ H  A+K     D + +++L+ MY
Sbjct: 102 FRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNMY 161

Query: 117 SECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI--RPSEVA 174
            + G +  AR LFDEMP R+ VSW+TMI GY    L +EA E+ + MR  +     +E  
Sbjct: 162 CKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENEFV 221

Query: 175 MISMVSLFADVADVDLGKAIHACVVRN---CKDEKLGVAIATALIDMYSKCGNLAYAKQL 231
             S++S       V+ G+ +H+  ++N   C      V++A AL+ MY KCG+L  A + 
Sbjct: 222 FTSVLSALTCYMLVNTGRQVHSLAMKNGLVCI-----VSVANALVTMYVKCGSLEDALKT 276

Query: 232 FNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL 291
           F      + ++W+ M++G+ +  + ++ ++LF +M +    PSE T++ +I  C     +
Sbjct: 277 FELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAI 336

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
             G+ +H Y L+ G+E  L + +ALVDMY KC  I  AR  F+ ++  DV++W ++I+ Y
Sbjct: 337 VEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQQPDVVLWTSIITGY 396

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
            Q    + A  L+  M++  V PN++TM  +L  C+   AL+ GK +H  I K    +++
Sbjct: 397 VQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLEI 456

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
            + +AL  MYAKCG ++  YR+F     RD+  WNAM++G   +G G E L  F  M   
Sbjct: 457 PIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLE 516

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
           G KP+ +TF+ LL+ACSH GLV  G   F  M     + P +EHY CMVD+L RAG L E
Sbjct: 517 GTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNIAPTVEHYACMVDILSRAGKLHE 576

Query: 532 AHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAV 591
           A E I+S  +   + +W  LLAASK H++  +G  A  +++E+        VL+S+IY  
Sbjct: 577 AKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGEKLMELGSLESSAYVLLSSIYTA 636

Query: 592 ANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             +W DV  VR +MK   V KEPG S +E+  L H F+ G
Sbjct: 637 LGKWEDVERVRGMMKARGVTKEPGCSWIELKSLTHVFVVG 676



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 262/513 (51%), Gaps = 27/513 (5%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G+ +H   +  G      ++N+LI +Y++C     A  +FD + N+DVVSW+ +I  + +
Sbjct: 29  GRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCLINAFSQ 88

Query: 150 GGLPEEALEVMREMRFM-----DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN-CK 203
                 +L VM   R +      I P+   +  + +  + ++D   G+  HA  V+  C 
Sbjct: 89  QQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACS 148

Query: 204 DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
            +   V  A++L++MY K G +  A+ LF+ + + + VSW  MISGY      +E   LF
Sbjct: 149 HD---VFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELF 205

Query: 264 AEMIEEN--------VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
             M  E         VF S ++ L+    C  +  +  G+ +H+  ++NG    +++ANA
Sbjct: 206 KLMRHEEKGKNENEFVFTSVLSALT----CYML--VNTGRQVHSLAMKNGLVCIVSVANA 259

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
           LV MY KC  +  A   F+   +K+ + W+A+++ +AQ    DKA +LF  M  S   P+
Sbjct: 260 LVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPS 319

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
           E T+VG+++ C++A A+  G+ +H Y  K G E+ + + +ALVDMYAKCG +  A + F 
Sbjct: 320 EFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFE 379

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
                D+ +W +++ GY  +G  E AL  +  M+  GV PN +T   +L ACS+   + +
Sbjct: 380 CIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQ 439

Query: 496 GKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAAS 555
           GK +   ++       +I     +  +  + G LD+ + +   MP R ++I W A+++  
Sbjct: 440 GKQMHAGIIK-YNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPAR-DVISWNAMISGL 497

Query: 556 KLHKNPSMG-EIAATQILE-IEPQNYGYNVLMS 586
             +   + G E+     LE  +P N  +  L+S
Sbjct: 498 SQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLS 530



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 133/287 (46%), Gaps = 13/287 (4%)

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           + +L  ++ C     L+ G+ LHA IL  G   S  +AN+L+++Y KC     A  +FD 
Sbjct: 11  LQVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDS 70

Query: 336 MKSKDVMIWNAVISAYA--QAHCID-KAFELF--IHMKVSKVRPNEVTMVGLLSLCTEAG 390
           + +KDV+ WN +I+A++  QAH        LF  + M    + PN  T+ G+ +  +   
Sbjct: 71  INNKDVVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLS 130

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
               G+  H    K     DV   ++L++MY K G V  A  LF E   R+   W  M++
Sbjct: 131 DSRAGRQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMIS 190

Query: 451 GYGMHGCGEEALIFFVDM--ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           GY      +EA   F  M  E  G   N   F  +L+A +   LV  G+ V    +   G
Sbjct: 191 GYASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKN-G 249

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL--RPNMIVWGALLA 553
           LV  +     +V +  + G L++A   +K+  L    N I W A++ 
Sbjct: 250 LVCIVSVANALVTMYVKCGSLEDA---LKTFELSGNKNSITWSAMVT 293


>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 846

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 216/590 (36%), Positives = 338/590 (57%), Gaps = 2/590 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y+K+   ++A+  +  MR + S V++ T   IL  CA      LG ++HG  I
Sbjct: 214 WNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVI 273

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +G + D  V+N L+ MYS+CG+L  AR LF+ MP  D V+W+ +I GY + G  +EA  
Sbjct: 274 GSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAP 333

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M    ++P  V   S +    +   +   K +H+ +VR+       V + +ALID+
Sbjct: 334 LFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRH--RVPFDVYLKSALIDI 391

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y K G++  A+++F +     V   T MISGY+      + +  F  +I+E + P+ +T+
Sbjct: 392 YFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTM 451

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  L+LGK LH  IL+   E  + + +A+ DMY KC  +  A   F  M  
Sbjct: 452 ASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSE 511

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D + WN++IS+++Q    + A +LF  M +S  + + V++   LS      AL  GK +
Sbjct: 512 TDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVSLSSALSSAANLPALYYGKEM 571

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H Y+ +     D  + +AL+DMY+KCG +  A  +F+    ++   WN+++A YG HGC 
Sbjct: 572 HGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMAGKNEVSWNSIIAAYGNHGCA 631

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            E L  F +M R+GV P+ +TF+ +++AC HAGLV EG   F  M    G+  ++EHY C
Sbjct: 632 RECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIHYFHCMTREYGIGARMEHYAC 691

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDL GRAG L EA + IKSMP  P+  VWG LL A +LH N  + ++A+  +LE++P+N
Sbjct: 692 MVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKN 751

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            GY VL+SN++A A  W  V  VRR+MKE  V+K PG+S ++VNG  H F
Sbjct: 752 SGYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQKIPGYSWIDVNGGTHMF 801



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 137/420 (32%), Positives = 211/420 (50%), Gaps = 2/420 (0%)

Query: 55  ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
           AL  Y  M  +    D +T P ++KAC  +    L   +H  A   G   D +V +ALI+
Sbjct: 129 ALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIK 188

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           +Y++ G +  AR +FDE+P RD + W+ M+ GY + G    A+     MR      + V 
Sbjct: 189 LYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVT 248

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
              ++S+ A      LG  +H  V+ +    +    +A  L+ MYSKCGNL  A++LFN 
Sbjct: 249 YTCILSICATRGKFCLGTQVHGLVIGS--GFEFDPQVANTLVAMYSKCGNLFDARKLFNT 306

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           + Q   V+W  +I+GY++    +E   LF  MI   V P  +T  S +      G L+  
Sbjct: 307 MPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHC 366

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
           K +H+YI+R+   F + + +AL+D+Y K  ++  AR +F      DV +  A+IS Y   
Sbjct: 367 KEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLH 426

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
                A   F  +    + PN +TM  +L  C    AL++GK LH  I K+ LE  V + 
Sbjct: 427 GLNIDAINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVG 486

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
           +A+ DMYAKCG ++ AY  F      D   WN+M++ +  +G  E A+  F  M  SG K
Sbjct: 487 SAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAK 546



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 136/498 (27%), Positives = 244/498 (48%), Gaps = 20/498 (4%)

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           + ++ +AC+   +    +++H   I  G+     +S+ ++ +Y  CG +     LF  + 
Sbjct: 47  LESLFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLE 106

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
             + + W+ MIRG +  G  + AL    +M   ++ P +     ++     + +V L   
Sbjct: 107 LCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPL--- 163

Query: 194 IHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
              C+V +     LG    + + +ALI +Y+  G +  A+++F+ L Q   + W VM+ G
Sbjct: 164 ---CMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHG 220

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
           Y++  + N  +  F  M       + +T   ++  C   G   LG  +H  ++ +GFEF 
Sbjct: 221 YVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFD 280

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
             +AN LV MY KC  +  AR LF+ M   D + WN +I+ Y Q    D+A  LF  M  
Sbjct: 281 PQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMIS 340

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
           + V+P+ VT    L    E+G+L   K +H+YI +  +  DV LK+AL+D+Y K GDV  
Sbjct: 341 AGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEM 400

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A ++F +    D+ +  AM++GY +HG   +A+  F  + + G+ PN +T   +L AC+ 
Sbjct: 401 ARKIFQQNTLVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASVLPACAA 460

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
              +  GK      +H   L  ++E+       + D+  + G LD A+E  + M    + 
Sbjct: 461 LAALKLGKE-----LHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMS-ETDS 514

Query: 546 IVWGALLAASKLHKNPSM 563
           I W +++++   +  P M
Sbjct: 515 ICWNSMISSFSQNGKPEM 532


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 204/570 (35%), Positives = 333/570 (58%), Gaps = 11/570 (1%)

Query: 65  NGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVS 124
           +G   D+F    I  A  +  +    K+IH   +  GL    ++   LI   S  G +  
Sbjct: 16  SGIHSDSFYASLIDSATHKAQL----KQIHARLLVLGLQFSGFLITKLIHASSSFGDITF 71

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           AR +FD++P   +  W+ +IRGY R    ++AL +   M+   + P       ++   + 
Sbjct: 72  ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFN--RLNQNSVVS 242
           ++ + +G+ +HA V R   D    V +   LI +Y+KC  L  A+ +F    L + ++VS
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDAD--VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVS 189

Query: 243 WTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYIL 302
           WT ++S Y +  E  E + +F++M + +V P  + ++S++     +  L+ G+ +HA ++
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249

Query: 303 RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
           + G E    +  +L  MY KC ++ +A+ LFD MKS ++++WNA+IS YA+     +A +
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 309

Query: 363 LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYA 422
           +F  M    VRP+ +++   +S C + G+LE  + ++ Y+ +     DV + +AL+DM+A
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFA 369

Query: 423 KCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
           KCG V GA  +F   + RD+ +W+AM+ GYG+HG   EA+  +  MER GV PN +TF+G
Sbjct: 370 KCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLG 429

Query: 483 LLNACSHAGLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
           LL AC+H+G+V EG   F++M  H +   P+ +HY C++DLLGRAG LD+A+E+IK MP+
Sbjct: 430 LLMACNHSGMVREGWWFFNRMADHKIN--PQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 487

Query: 542 RPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGV 601
           +P + VWGALL+A K H++  +GE AA Q+  I+P N G+ V +SN+YA A  W+ VA V
Sbjct: 488 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 547

Query: 602 RRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           R  MKE  + K+ G S VEV G +  F  G
Sbjct: 548 RVRMKEKGLNKDVGCSWVEVRGRLEAFRVG 577



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 141/446 (31%), Positives = 244/446 (54%), Gaps = 18/446 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y +NN    AL +Y+ M+      D+FT P +LKAC+ +    +G+ +H    
Sbjct: 87  WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFD--EMPNRDVVSWSTMIRGYHRGGLPEEA 156
           + G D D +V N LI +Y++C  L SAR +F+   +P R +VSW+ ++  Y + G P EA
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           LE+  +MR MD++P  VA++S+++ F  + D+  G++IHA VV      K+G+ I   L+
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV------KMGLEIEPDLL 260

Query: 217 ----DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
                MY+KCG +A AK LF+++   +++ W  MISGY +     E + +F EMI ++V 
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR 320

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P  I+I S I  C  VG L+  + ++ Y+ R+ +   + +++AL+DM+ KC  +  AR +
Sbjct: 321 PDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLV 380

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FD    +DV++W+A+I  Y       +A  L+  M+   V PN+VT +GLL  C  +G +
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMV 440

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS-EAIYRDICMWNAMMAG 451
             G W    +    +         ++D+  + G ++ AY +     +   + +W A+++ 
Sbjct: 441 REGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500

Query: 452 YGMH---GCGEEAL--IFFVDMERSG 472
              H     GE A   +F +D   +G
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSNTG 526



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 172/318 (54%), Gaps = 7/318 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA--CAQVLMTHLGKEI 93
           +  + ++V++Y +N +P  AL I++ MRK   + D   + ++L A  C Q L    G+ I
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQ--GRSI 244

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           H   +K GL+ +  +  +L  MY++CG + +A+ LFD+M + +++ W+ MI GY + G  
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            EA+++  EM   D+RP  +++ S +S  A V  ++  ++++  V R+  D +  V I++
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS--DYRDDVFISS 362

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALIDM++KCG++  A+ +F+R     VV W+ MI GY       E + L+  M    V P
Sbjct: 363 ALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHP 422

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +++T L L++ C   G ++ G W    +  +           ++D+ G+   +  A  + 
Sbjct: 423 NDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVI 482

Query: 334 DGMKSKD-VMIWNAVISA 350
             M  +  V +W A++SA
Sbjct: 483 KCMPVQPGVTVWGALLSA 500


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 214/591 (36%), Positives = 337/591 (57%), Gaps = 3/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N +V  Y K      AL++Y  M   G+  D +T P +L++C  V    +G+E+H   +
Sbjct: 163 WNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPDLTMGREVHAHVL 222

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + GL  +  V NAL+ MY++CG + +AR +FD M   D +SW+ MI G+      E  LE
Sbjct: 223 RFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLE 282

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M   ++ P+ + + S+      ++D+D  K IHA  V+  +     VA   +LI M
Sbjct: 283 LFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVK--RGFATDVAFCNSLIQM 340

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YS  G +  A  +F+R+     +SWT MISGY +    ++ + ++A M   NV P ++T+
Sbjct: 341 YSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDVTV 400

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +  C  +G L +G  LH      GF   + +ANALV+MY K + I  A  +F  M  
Sbjct: 401 ASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPD 460

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KDV+ W+++I+ +   H   +A   F HM ++ V+PN VT +  L+ C   G+L  GK +
Sbjct: 461 KDVISWSSMIAGFCFNHKNFEALYYFRHM-LADVKPNSVTFIAALAACAATGSLRCGKEI 519

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ +QG+  +  +  AL+D+Y KCG    A+  F     +D+  WN M+AG+  HG G
Sbjct: 520 HAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHG 579

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           + AL FF +M  +G  P+ +TF+ LL  CS AG+V++G  +F  M     +VP ++HY C
Sbjct: 580 DIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYAC 639

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLL R G L E +  I  MP+ P+  VWGALL   ++H+N  +GE+AA  +LE+EP +
Sbjct: 640 MVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAAKIVLELEPND 699

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            GY+VL+S++YA A  W +V+ VR+ M+   ++ + G S VEV G +H F+
Sbjct: 700 AGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVEVKGAIHAFL 750



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 147/466 (31%), Positives = 243/466 (52%), Gaps = 20/466 (4%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           + NA++ M    G    A  +F +MP RDV SW+ M+ GY + G  EEAL++   M +  
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA--TALIDMYSKCGNL 225
            RP       ++     V D+ +G+ +HA V+R      LGV +    AL+ MY+KCG++
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRF----GLGVEVDVLNALVTMYAKCGDV 246

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
             A+++F+ ++    +SW  MI+G+   +E   G+ LF  M+E+ V P+ +TI S+ +  
Sbjct: 247 EAARKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVAS 306

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
           G +  L   K +HA  ++ GF   +A  N+L+ MY     +  A T+F  M+++D M W 
Sbjct: 307 GLLSDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWT 366

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
           A+IS Y +    DKA E++  M+V+ V P++VT+   L+ C   G L++G  LH     +
Sbjct: 367 AMISGYEKNGFPDKALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSK 426

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
           G    +++  ALV+MYAK   +  A  +F     +D+  W++M+AG+  +    EAL +F
Sbjct: 427 GFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYF 486

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKS----VFDKMVHGLGLVPKIEHYGCMVD 521
             M  + VKPN +TFI  L AC+  G +  GK     V  + +   G VP       ++D
Sbjct: 487 RHM-LADVKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPN-----ALLD 540

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
           L  + G    A     +   + +++ W  +LA    H +   G+IA
Sbjct: 541 LYVKCGQTGYAWAQFGAHGTK-DVVSWNIMLAGFVAHGH---GDIA 582



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 198/392 (50%), Gaps = 5/392 (1%)

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           P E A +++  L       + G  + AC   +      G+ +  A++ M  + G   +A 
Sbjct: 92  PDEDAYVALFHLCEWRRAAEHG--LRACGHADAAHGTFGLRLGNAMLSMLVRFGETWHAW 149

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           ++F ++ +  V SW VM+ GY +   + E + L+  M+     P   T   ++  CG V 
Sbjct: 150 KVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVP 209

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
            L +G+ +HA++LR G    + + NALV MY KC ++ +AR +FDGM   D + WNA+I+
Sbjct: 210 DLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIA 269

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
            + + H  +   ELF+HM   +V PN +T+  +         L+  K +H    K+G   
Sbjct: 270 GHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFAT 329

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           DV    +L+ MY+  G +  A  +FS    RD   W AM++GY  +G  ++AL  +  ME
Sbjct: 330 DVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALME 389

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
            + V P+ +T    L AC+  G +  G  + + +    G +  I     +V++  ++ ++
Sbjct: 390 VNNVSPDDVTVASALAACASLGRLDVGIKLHE-LATSKGFIRYIVVANALVEMYAKSKII 448

Query: 530 DEAHEMIKSMPLRPNMIVWGALLAASKL-HKN 560
           ++A E+ K MP + ++I W +++A     HKN
Sbjct: 449 EKAIEVFKYMPDK-DVISWSSMIAGFCFNHKN 479


>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Glycine max]
          Length = 813

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/590 (35%), Positives = 337/590 (57%), Gaps = 2/590 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y+K+    +A+  +  MR + S V++ T   IL  CA       G ++HG  I
Sbjct: 181 WNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVI 240

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +G + D  V+N L+ MYS+CG+L+ AR LF+ MP  D V+W+ +I GY + G  +EA  
Sbjct: 241 GSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAP 300

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M    ++P  V   S +    +   +   K +H+ +VR+       V + +ALID+
Sbjct: 301 LFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRH--RVPFDVYLKSALIDV 358

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y K G++  A+++F +     V   T MISGY+      + +  F  +I+E +  + +T+
Sbjct: 359 YFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTM 418

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  V  L+ GK LH +IL+   E  + + +A+ DMY KC  +  A   F  M  
Sbjct: 419 ASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSD 478

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +D + WN++IS+++Q    + A +LF  M +S  + + V++   LS      AL  GK +
Sbjct: 479 RDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEM 538

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H Y+ +     D  + + L+DMY+KCG++  A+ +F+    ++   WN+++A YG HGC 
Sbjct: 539 HGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCP 598

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            E L  + +M R+G+ P+ +TF+ +++AC HAGLV EG   F  M    G+  ++EHY C
Sbjct: 599 RECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYAC 658

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDL GRAG + EA + IKSMP  P+  VWG LL A +LH N  + ++A+  +LE++P+N
Sbjct: 659 MVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKN 718

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            GY VL+SN++A A  W  V  VR +MKE  V+K PG+S ++VNG  H F
Sbjct: 719 SGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMF 768



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/424 (32%), Positives = 216/424 (50%), Gaps = 2/424 (0%)

Query: 55  ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
           AL  Y  M  +    D +T P ++KAC  +    L   +H  A   G   D +  +ALI+
Sbjct: 96  ALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIK 155

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           +Y++ G +  AR +FDE+P RD + W+ M+RGY + G  + A+    EMR      + V 
Sbjct: 156 LYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVT 215

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
              ++S+ A   +   G  +H  V+ +    +    +A  L+ MYSKCGNL YA++LFN 
Sbjct: 216 YTCILSICATRGNFCAGTQLHGLVIGS--GFEFDPQVANTLVAMYSKCGNLLYARKLFNT 273

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           + Q   V+W  +I+GY++    +E   LF  MI   V P  +T  S +      G L+  
Sbjct: 274 MPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHC 333

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
           K +H+YI+R+   F + + +AL+D+Y K  ++  AR +F      DV +  A+IS Y   
Sbjct: 334 KEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLH 393

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
                A   F  +    +  N +TM  +L  C    AL+ GK LH +I K+ LE  V + 
Sbjct: 394 GLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVG 453

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
           +A+ DMYAKCG ++ AY  F     RD   WN+M++ +  +G  E A+  F  M  SG K
Sbjct: 454 SAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAK 513

Query: 475 PNGI 478
            + +
Sbjct: 514 FDSV 517



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 140/505 (27%), Positives = 247/505 (48%), Gaps = 22/505 (4%)

Query: 69  VDNFT--IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSAR 126
           +D+ T  + ++ +AC+   M    +++H   I  G+      S+ ++ +Y  CG    A 
Sbjct: 7   LDSLTTQLESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAG 66

Query: 127 YLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            LF E+  R  + W+ MIRG +  G  + AL    +M   ++ P +     ++     + 
Sbjct: 67  NLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLN 126

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAI----ATALIDMYSKCGNLAYAKQLFNRLNQNSVVS 242
           +V L      C+V +     LG  +     +ALI +Y+  G +  A+++F+ L     + 
Sbjct: 127 NVPL------CMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTIL 180

Query: 243 WTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYIL 302
           W VM+ GY++  + +  +  F EM       + +T   ++  C   G    G  LH  ++
Sbjct: 181 WNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVI 240

Query: 303 RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
            +GFEF   +AN LV MY KC  +  AR LF+ M   D + WN +I+ Y Q    D+A  
Sbjct: 241 GSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAP 300

Query: 363 LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYA 422
           LF  M  + V+P+ VT    L    E+G+L   K +H+YI +  +  DV LK+AL+D+Y 
Sbjct: 301 LFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYF 360

Query: 423 KCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
           K GDV  A ++F + I  D+ +  AM++GY +HG   +A+  F  + + G+  N +T   
Sbjct: 361 KGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMAS 420

Query: 483 LLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIKS 538
           +L AC+    +  GK      +H   L  ++E+       + D+  + G LD A+E  + 
Sbjct: 421 VLPACAAVAALKPGKE-----LHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRR 475

Query: 539 MPLRPNMIVWGALLAASKLHKNPSM 563
           M  R + + W +++++   +  P +
Sbjct: 476 MSDR-DSVCWNSMISSFSQNGKPEI 499



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 166/330 (50%), Gaps = 10/330 (3%)

Query: 26  KFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVL 85
           K    NI+  +    ++++ Y+ +     A+N + ++ + G   ++ T+ ++L ACA V 
Sbjct: 370 KIFQQNILVDVAVCTAMISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVA 429

Query: 86  MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIR 145
               GKE+H   +K  L+    V +A+  MY++CG L  A   F  M +RD V W++MI 
Sbjct: 430 ALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMIS 489

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
            + + G PE A+++ R+M     +   V++ S +S  A++  +  GK +H  V+RN    
Sbjct: 490 SFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSS 549

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
                +A+ LIDMYSKCGNLA A  +FN ++  + VSW  +I+ Y       E + L+ E
Sbjct: 550 D--TFVASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHE 607

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           M+   + P  +T L +I  CG  G +  G  + H      G    +     +VD+YG+  
Sbjct: 608 MLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYGRAG 667

Query: 325 EIRSARTLFDGMKS----KDVMIWNAVISA 350
            +  A   FD +KS     D  +W  ++ A
Sbjct: 668 RVHEA---FDTIKSMPFTPDAGVWGTLLGA 694


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  390 bits (1003), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 218/596 (36%), Positives = 346/596 (58%), Gaps = 9/596 (1%)

Query: 39  YNSLVTSYIKNNKPSSALN-IYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +NS++++Y+ N     A+   Y  +  +    D +T P +LKAC  ++    G+ IH +A
Sbjct: 185 WNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWA 241

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
            K G   + +V+ +LI MYS  G    AR LFD+MP RD+ SW+ MI G  + G   +AL
Sbjct: 242 FKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQAL 301

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           +V+ EMR   I+ + V ++S++ +   + D+     IH  V+++  +  L V+   ALI+
Sbjct: 302 DVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVS--NALIN 359

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+K GNL  A++ F ++    VVSW  +I+ Y + ++       F +M      P  +T
Sbjct: 360 MYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLT 419

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEF-SLAMANALVDMYGKCREIRSARTLFDGM 336
           ++SL          +  + +H +I+R G+    + + NA+VDMY K   + SA  +F+ +
Sbjct: 420 LVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEII 479

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMG 395
             KDV+ WN +I+ YAQ     +A E++  M+  K + PN+ T V +L      GAL+ G
Sbjct: 480 LVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG 539

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H  + K  L +DV + T L+D+Y KCG +  A  LF +        WNA+++ +G+H
Sbjct: 540 MRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIH 599

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  E+ L  F +M   GVKP+ +TF+ LL+ACSH+G V EGK  F +++   G+ P ++H
Sbjct: 600 GHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF-RLMQEYGIKPSLKH 658

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           YGCMVDLLGRAG L+ A+  IK MPL+P+  +WGALL A ++H N  +G+ A+ ++ E++
Sbjct: 659 YGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVD 718

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            +N GY VL+SNIYA   +W  V  VR + +E  +KK PG+S++EVN  V  F  G
Sbjct: 719 SKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTG 774



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 149/548 (27%), Positives = 276/548 (50%), Gaps = 30/548 (5%)

Query: 19  HIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVD-NFTIPTI 77
           HI+    K  +T+   P  R    + S  ++   S   + Y    +N  E+D NF   + 
Sbjct: 74  HILAPTLKSRHTSKFLPPRRRPIQLFSAARS---SPQFSSYGLGNQN-EEIDFNFLFDSS 129

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
            K       T   K +H   +  G     ++S  L+ +Y+  G +  +R  FD++P +DV
Sbjct: 130 TK-------TPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDV 182

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHA 196
            +W++MI  Y   G   EA+    ++  + +IRP       ++     + D   G+ IH 
Sbjct: 183 YTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIH- 238

Query: 197 CVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
                C   KLG    V +A +LI MYS+ G    A+ LF+ +    + SW  MISG I+
Sbjct: 239 -----CWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQ 293

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
                + + +  EM  E +  + +T++S++  C  +G +     +H Y++++G EF L +
Sbjct: 294 NGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFV 353

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
           +NAL++MY K   +  AR  F  M   DV+ WN++I+AY Q      A   F+ M+++  
Sbjct: 354 SNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGF 413

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG-LEVDVILKTALVDMYAKCGDVNGAY 431
           +P+ +T+V L S+  ++   +  + +H +I ++G L  DV++  A+VDMYAK G ++ A+
Sbjct: 414 QPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAH 473

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER-SGVKPNGITFIGLLNACSHA 490
           ++F   + +D+  WN ++ GY  +G   EA+  +  ME    + PN  T++ +L A +H 
Sbjct: 474 KVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHV 533

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           G + +G  +  +++    L   +    C++D+ G+ G L +A  +   +P + + + W A
Sbjct: 534 GALQQGMRIHGRVIK-TNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVP-QESSVTWNA 591

Query: 551 LLAASKLH 558
           +++   +H
Sbjct: 592 IISCHGIH 599


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 215/521 (41%), Positives = 314/521 (60%), Gaps = 19/521 (3%)

Query: 126 RYLFDEMPNR-DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           R +F +  ++  V SW+++I  + R G   +AL     MR + + P+       +   + 
Sbjct: 39  RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98

Query: 185 VADVDLGKAIH--ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVS 242
           + D+  GK IH  A V     D    + +A+ALIDMYSKCG L  A++LF+ + + +VVS
Sbjct: 99  LYDLCAGKQIHQQAFVFGYGSD----IFVASALIDMYSKCGYLNDARKLFDEIPERNVVS 154

Query: 243 WTVMISGYIRCNEINEGVRLFAE--MIEENVFP---------SEITILSLIIECGFVGGL 291
           WT MISGY++     E V LF E  +++E  +            + +  +I  C  V   
Sbjct: 155 WTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVK 214

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
            + + +H   ++ GFE  LA+ N L+D Y KC EI  +R +FDGM+  DV  WN++I+ Y
Sbjct: 215 SVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVY 274

Query: 352 AQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
           AQ     +AF LF  M K  +VR N VT+  +L  C  +GAL++GK +H  + K  LE +
Sbjct: 275 AQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDN 334

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
           +++ T++VDMY KCG V  A + F     +++  W  M+AGYGMHG G+EA+  F +M R
Sbjct: 335 LVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIR 394

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
            G+KPN ITF+ +L ACSHAGL+ EG   F+KM     + P IEHY CMVDLLGRAG L 
Sbjct: 395 CGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLK 454

Query: 531 EAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYA 590
           EA+ +I+ M ++P+ IVWG+LL A ++HKN  +GEI+A ++ +++P N GY VL+SNIYA
Sbjct: 455 EAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYA 514

Query: 591 VANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            A RW+DV  +R +MK   + K PG+S VE  G VH F+ G
Sbjct: 515 DAGRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVG 555



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 226/431 (52%), Gaps = 16/431 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++  + ++     AL  ++ MRK     +  T P  +K+C+ +     GK+IH  A 
Sbjct: 54  WNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAF 113

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G   D +V++ALI MYS+CG L  AR LFDE+P R+VVSW++MI GY +     EA+ 
Sbjct: 114 VFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVF 173

Query: 159 VMREMRFMD-----------IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
           + +E   +D           +    V +  ++S  A V    + + +H   V+  K  + 
Sbjct: 174 LFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVK--KGFEG 231

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            +A+   L+D Y+KCG ++ ++++F+ + +  V SW  +I+ Y +     E   LF++M+
Sbjct: 232 CLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMV 291

Query: 268 EE-NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
           +   V  + +T+ ++++ C   G LQ+GK +H  +++   E +L +  ++VDMY KC  +
Sbjct: 292 KRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRV 351

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             AR  FD +K K+V  W  +++ Y       +A ++F  M    ++PN +T V +L+ C
Sbjct: 352 EMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAAC 411

Query: 387 TEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICM 444
           + AG L+ G  W +    +  +E  +   + +VD+  + G +  AY L  E  +  D  +
Sbjct: 412 SHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIV 471

Query: 445 WNAMMAGYGMH 455
           W +++    +H
Sbjct: 472 WGSLLGACRIH 482


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 201/595 (33%), Positives = 344/595 (57%), Gaps = 8/595 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + ++++  +K  +   +L ++  + ++    D + + T+L AC+ +     GK+IH   +
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL 276

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + GL+ DA + N LI  Y +CG +++A  LF+ MPN++++SW+T++ GY +  L +EA+E
Sbjct: 277 RYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAME 336

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALID 217
           +   M    ++P   A  S+++  A +  +  G  +HA  ++ N  ++     +  +LID
Sbjct: 337 LFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY---VTNSLID 393

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN---EINEGVRLFAEMIEENVFPS 274
           MY+KC  L  A+++F+      VV +  MI GY R     E++E + +F +M    + PS
Sbjct: 394 MYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPS 453

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            +T +SL+     +  L L K +H  + + G    +   +AL+D+Y  C  ++ +R +FD
Sbjct: 454 LLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFD 513

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            MK KD++IWN++ + Y Q    ++A  LF+ +++S+ RP+E T   +++      ++++
Sbjct: 514 EMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQL 573

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G+  H  + K+GLE +  +  AL+DMYAKCG    A++ F  A  RD+  WN++++ Y  
Sbjct: 574 GQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYAN 633

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           HG G++AL     M   G++PN ITF+G+L+ACSHAGLV +G   F+ M+   G+ P+ E
Sbjct: 634 HGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETE 692

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HY CMV LLGRAG L++A E+I+ MP +P  IVW +LL+      N  + E AA   +  
Sbjct: 693 HYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILS 752

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +P++ G   ++SNIYA    W +   VR  MK   V KEPG S + +N  VH F+
Sbjct: 753 DPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFL 807



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 160/500 (32%), Positives = 261/500 (52%), Gaps = 21/500 (4%)

Query: 86  MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIR 145
           + H    +HG  I  GL+ D Y+SN LI +YS  G +V AR +F++MP R++VSWSTM+ 
Sbjct: 59  LLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVS 118

Query: 146 GYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFA--DVADVDLGKAIHACVVRNC 202
             +  G+ EE+L V  E  R     P+E  + S +   +  D     +   + + +V++ 
Sbjct: 119 ACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSG 178

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
            D    V + T LID Y K GN+ YA+ +F+ L + S V+WT MISG ++       ++L
Sbjct: 179 FDRD--VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQL 236

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F +++E+NV P    + +++  C  +  L+ GK +HA+ILR G E   ++ N L+D Y K
Sbjct: 237 FYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVK 296

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C  + +A  LF+GM +K+++ W  ++S Y Q     +A ELF  M    ++P+      +
Sbjct: 297 CGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSI 356

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           L+ C    AL  G  +H Y  K  L  D  +  +L+DMYAKC  +  A ++F      D+
Sbjct: 357 LTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADV 416

Query: 443 CMWNAMMAGYGMHGCG---EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
            ++NAM+ GY   G      EAL  F DM    ++P+ +TF+ LL A   A L + G S 
Sbjct: 417 VLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA--SASLTSLGLS- 473

Query: 500 FDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAAS 555
             K +HGL    GL   I     ++D+      L ++  +   M ++ ++++W ++ A  
Sbjct: 474 --KQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAG- 529

Query: 556 KLHKNPSMGEIAATQILEIE 575
             +   S  E A    LE++
Sbjct: 530 --YVQQSENEEALNLFLELQ 547



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 113/222 (50%), Gaps = 11/222 (4%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  +NS+   Y++ ++   ALN++  ++ +    D FT   ++ A   +    LG+E
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE 576

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
            H   +K GL+ + Y++NAL+ MY++CGS   A   FD   +RDVV W+++I  Y   G 
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            ++AL+++ +M    I P+ +  + ++S  +    V+ G      ++R       G+   
Sbjct: 637 GKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR------FGIEPE 690

Query: 213 T----ALIDMYSKCGNLAYAKQLFNRL-NQNSVVSWTVMISG 249
           T     ++ +  + G L  A++L  ++  + + + W  ++SG
Sbjct: 691 TEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSG 732



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 25/185 (13%)

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           LL L      L     +H  I   GLE+D  L   L+++Y++ G +  A ++F +   R+
Sbjct: 50  LLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERN 109

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERS-GVKPNGITFIGLLNACSHAGLVTEG---- 496
           +  W+ M++    HG  EE+L+ F++  R+    PN       + ACS  GL   G    
Sbjct: 110 LVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMV 167

Query: 497 --------KSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
                   KS FD+ V+   L         ++D   + G +D A  +  ++P   + + W
Sbjct: 168 FQLQSFLVKSGFDRDVYVGTL---------LIDFYLKDGNIDYARLVFDALP-EKSTVTW 217

Query: 549 GALLA 553
             +++
Sbjct: 218 TTMIS 222


>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
 gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
          Length = 744

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/600 (33%), Positives = 349/600 (58%), Gaps = 9/600 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKN--GSEVDNFTIPTILKACAQVLMTHLGKEIHGF 96
           +N++++ + ++     +L ++  M K   GS  +       L +CA +     G EIHGF
Sbjct: 108 WNTMISGFCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGF 167

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFD-----EMPNRDVVSWSTMIRGYHRGG 151
            +K G+D D ++ +ALI+MY +CG + +A  +F+     E+  R++  W+ MI GY    
Sbjct: 168 LVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNE 227

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
               ALE+  EM  + I P    ++ ++ L + + D+ +GK IH  ++    D+   V +
Sbjct: 228 CLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDD--VRV 285

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
            TAL++MY KCG+   + Q+F R   +++V W  ++    +    NE +  F+E + +  
Sbjct: 286 GTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCG 345

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
           FP  + +L+ +  C F+     G  +H + ++ GF+  + +  ALVD YGKC ++  A+ 
Sbjct: 346 FPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQ 405

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +F G+ ++D++ WNA+IS +AQ  C D+A + F  M+  +++PN VTM  +LS+CT    
Sbjct: 406 VFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSV 465

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           + + K +H Y+ +   E + ++  +L+  YAKCGD++ +  +F +   R+   WN+++ G
Sbjct: 466 MILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLG 525

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           +GMHG  +E    F  M+ + +KP+  TF  LL++CSH+G V  G   F+ M+    L P
Sbjct: 526 FGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEP 585

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
           ++E Y CMVDLLGRAG L++A+++I SMP  P+  +WG+LLA+ K H N  + E+ A  I
Sbjct: 586 RVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNHGNTKLAEVVANHI 645

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            E++  + GY VL++N+Y  +   N+V  VR  +K++ +KK+PG S +EV+  +H F+ G
Sbjct: 646 FELDASSVGYRVLLANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCSWIEVDNSIHIFVAG 705



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 157/568 (27%), Positives = 286/568 (50%), Gaps = 26/568 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTI-PTILKACAQVLMTHLGKEIH 94
           +++ N ++    ++     A+ +Y    + G  V+ F   P ++KA   +   + GK+IH
Sbjct: 3   VSKVNRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIH 62

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           G  +K G   D +V N+L+ MY +CG+  +A  +F+ M  RD VSW+TMI G+ + G   
Sbjct: 63  GHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYV 122

Query: 155 EALEVMREM--RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
           ++L + R M         + VA ++ +S  A +  +  G  IH  +V+   D      + 
Sbjct: 123 KSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSD--EFLV 180

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVS-----WTVMISGYIRCNEINEGVRLFAEMI 267
           +ALI+MY KCG++  A+ +F R+  N +V      W VMI GY+    ++  + LF EM+
Sbjct: 181 SALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEML 240

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
           E  + P   T++ +++ C  +  L +GK +H  IL  G +  + +  AL++MY KC +  
Sbjct: 241 ELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPE 300

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           ++  +F   ++ ++++W +V+   AQ    ++A E F    +    P+ V ++  L  C+
Sbjct: 301 TSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACS 360

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
                  G  +H +  K G + DV +  ALVD Y KCGD+  A ++F     RD+  WNA
Sbjct: 361 FLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNA 420

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           +++G+  + C +EAL  F DM+   +KPN +T   +L+ C+H  ++     +  K VH  
Sbjct: 421 LISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTHLSVM-----ILCKEVHCY 475

Query: 508 GLVPKIEHYG----CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
            L    E        ++    + G +  +  + + +P+R N + W ++L    +H     
Sbjct: 476 LLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLPVR-NEVTWNSILLGFGMHGRTD- 533

Query: 564 GEIAAT----QILEIEPQNYGYNVLMSN 587
            E+ AT    +   I+P +  +  L+S+
Sbjct: 534 -EMFATFEKMKEANIKPDHGTFTSLLSS 560



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 161/317 (50%), Gaps = 4/317 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + S++ +  +N  P+ AL  ++    +    D   +   L+AC+ + +   G  IHG
Sbjct: 314 LVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRACSFLSLKPRGMAIHG 373

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           FAIK G D D +V  AL+  Y +CG +  A+ +F  +  RD+VSW+ +I G+ +    +E
Sbjct: 374 FAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADE 433

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL+  R+M+   I+P+ V M  ++S+   ++ + L K +H  ++R+  +      +  +L
Sbjct: 434 ALKAFRDMQSKQIKPNTVTMACILSVCTHLSVMILCKEVHCYLLRHWFETN--ALVNNSL 491

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I  Y+KCG++  ++ +F +L   + V+W  ++ G+      +E    F +M E N+ P  
Sbjct: 492 ISAYAKCGDIHSSRTVFEKLPVRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDH 551

Query: 276 ITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            T  SL+  C   G +  G K+ ++ +     E  +     +VD+ G+   +  A  L  
Sbjct: 552 GTFTSLLSSCSHSGKVDAGWKYFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIM 611

Query: 335 GMK-SKDVMIWNAVISA 350
            M  S D  IW +++++
Sbjct: 612 SMPCSPDDRIWGSLLAS 628


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/591 (35%), Positives = 335/591 (56%), Gaps = 3/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N +V  Y K      AL++Y  M   G   D +T P +L+ C  +    +G+E+H   +
Sbjct: 165 WNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVL 224

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G   +  V NAL+ MY++CG +V+AR +FD M   D +SW+ MI G+      E  LE
Sbjct: 225 RFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLE 284

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M   +++P+ + + S+      +++V   K +H   V+  +   + VA   +LI M
Sbjct: 285 LFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVK--RGFAIDVAFCNSLIQM 342

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+  G +  A ++F+R+     +SWT MISGY +    ++ + ++A M   NV P ++TI
Sbjct: 343 YTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTI 402

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +  C  +G L +G  LH      GF   + +ANAL++MY K + I  A  +F  M  
Sbjct: 403 ASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAE 462

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KDV+ W+++I+ +   H   +A   F +M +  V+PN VT +  LS C   GAL  GK +
Sbjct: 463 KDVVSWSSMIAGFCFNHRSFEALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGKEI 521

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H Y+ + G+  +  +  AL+D+Y KCG  + A+  FS    +D+  WN M++G+  HG G
Sbjct: 522 HAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLG 581

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           + AL  F  M   G  P+ +TF+ LL ACS AG+V +G  +F  M     +VP ++HY C
Sbjct: 582 DIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYAC 641

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLL R G L EA+ +I  MP++P+  VWGALL   ++H++  +GE+AA  ILE+EP +
Sbjct: 642 MVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPND 701

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
             Y+VL+ ++Y  A +W  VA VR+ M+E  ++++ G S VEV G+ H F+
Sbjct: 702 VAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFL 752



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 134/423 (31%), Positives = 225/423 (53%), Gaps = 18/423 (4%)

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
           ++ACA+    H       F ++ G        NA++ M    G +  A  +F +MP RDV
Sbjct: 116 MRACARADAEH-----PSFGLRLG--------NAMLSMLVRFGEIWHAWRVFAKMPERDV 162

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
            SW+ M+ GY + G  EEAL++   M +  +RP       ++     + D  +G+ +HA 
Sbjct: 163 FSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAH 222

Query: 198 VVR-NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
           V+R    DE   V +  AL+ MY+KCG++  A+++F+ +     +SW  MI+G+   +E 
Sbjct: 223 VLRFGFGDE---VDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHEC 279

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
             G+ LF  M+E  V P+ +TI S+ +  G +  +   K +H + ++ GF   +A  N+L
Sbjct: 280 EAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSL 339

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           + MY     +  A  +F  M++KD M W A+IS Y +    DKA E++  M++  V P++
Sbjct: 340 IQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDD 399

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           VT+   L+ C   G L++G  LH   + +G    V++  AL++MYAK   ++ A  +F  
Sbjct: 400 VTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKF 459

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
              +D+  W++M+AG+  +    EAL +F  M    VKPN +TFI  L+AC+  G +  G
Sbjct: 460 MAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSG 518

Query: 497 KSV 499
           K +
Sbjct: 519 KEI 521



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 199/384 (51%), Gaps = 4/384 (1%)

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           P E A +++  L      VD G  + AC   + +    G+ +  A++ M  + G + +A 
Sbjct: 94  PDEGAYVALFRLCEWRRAVDAG--MRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAW 151

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           ++F ++ +  V SW VM+ GY +   + E + L+  M+   + P   T   ++  CG + 
Sbjct: 152 RVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIP 211

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
             ++G+ +HA++LR GF   + + NALV MY KC +I +AR +FDGM   D + WNA+I+
Sbjct: 212 DWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIA 271

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
            + + H  +   ELF+ M  ++V+PN +T+  +         +   K +H +  K+G  +
Sbjct: 272 GHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAI 331

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           DV    +L+ MY   G +  A ++FS    +D   W AM++GY  +G  ++AL  +  ME
Sbjct: 332 DVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALME 391

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
              V P+ +T    L AC+  G +  G  + + +    G +  +     ++++  ++  +
Sbjct: 392 LHNVSPDDVTIASALAACACLGRLDVGIKLHE-LAQNKGFIRYVVVANALLEMYAKSKHI 450

Query: 530 DEAHEMIKSMPLRPNMIVWGALLA 553
           D+A E+ K M  + +++ W +++A
Sbjct: 451 DKAIEVFKFMAEK-DVVSWSSMIA 473


>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Vitis vinifera]
          Length = 590

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 207/550 (37%), Positives = 320/550 (58%), Gaps = 20/550 (3%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV----VSWSTMIRG 146
           K+IH   I +GL  D +V + + + + +    V   Y FD +   D+    + ++T+I  
Sbjct: 22  KQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFVD--YAFDFLNQTDLHVGTLPYNTLIAA 79

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           Y     P+ A  V   +      P       ++        V  G+ +H   V      K
Sbjct: 80  YASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAV------K 133

Query: 207 LG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
           +G    + +  +L+  YS CG    A ++F+ +    VVSWT +ISGY+R    +E + L
Sbjct: 134 MGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAINL 193

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F +M   +V P+  T +S+++ CG +G L +GK +H  + +  F   L + NALVDMY K
Sbjct: 194 FLKM---DVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFGIGLVVGNALVDMYVK 250

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C  +  AR LFD +  +D++ W ++IS   Q      + ELF  M++S V P+ + +  +
Sbjct: 251 CECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSV 310

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           LS C   GAL+ G+W+  YIE+QG+E D+ + TALVDMYAKCG +  A  +F+    R+I
Sbjct: 311 LSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNI 370

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             WNA++ G  MHG G EAL  F  M  +G++PN +TF+ +L AC H+GLV EG+S F +
Sbjct: 371 FTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQ 430

Query: 503 MV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
           M+       P++EHYGCM+DLL RAGLLDEA++ I++MPL P++++WGALL+A K + N 
Sbjct: 431 MISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANGNV 490

Query: 562 SMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
            + +   + +LE++ Q+ G  VL+SNIYA   RW+DV  VRR+MK+  ++K PG S +EV
Sbjct: 491 ELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGSSVIEV 550

Query: 622 NGLVHKFIRG 631
           +G  H+F+ G
Sbjct: 551 DGEAHEFLVG 560



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 139/424 (32%), Positives = 230/424 (54%), Gaps = 14/424 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+L+ +Y  +  P +A  +Y  +  NG   D +T P +LKAC + L    G+++HG A+
Sbjct: 73  YNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAV 132

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   D YV N+L+  YS CG    A  +FDEM  RDVVSW+ +I GY R GL +EA+ 
Sbjct: 133 KMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLISGYVRTGLFDEAIN 192

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +   MD+ P+    +S++     +  + +GK +H  V +  +   +G+ +  AL+DM
Sbjct: 193 LFLK---MDVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYK--RAFGIGLVVGNALVDM 247

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC  L  A++LF+ L    +VSWT +ISG ++C +  + + LF +M    V P  I +
Sbjct: 248 YVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIIL 307

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +G L  G+W+  YI R G E+ + +  ALVDMY KC  I  A  +F+G+ +
Sbjct: 308 TSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPN 367

Query: 339 KDVMIWNAVISAYA---QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +++  WNA++   A     H   K FEL I    + +RPNEVT + +L+ C  +G +  G
Sbjct: 368 RNIFTWNALLGGLAMHGHGHEALKHFELMIG---AGIRPNEVTFLAILTACCHSGLVAEG 424

Query: 396 KWLHTYIEKQGLEVDVILK--TALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGY 452
           +     +  Q       L+    ++D+  + G ++ AY+      +  D+ +W A+++  
Sbjct: 425 RSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSAC 484

Query: 453 GMHG 456
             +G
Sbjct: 485 KANG 488



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 83/145 (57%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + S+++  ++  +P  +L ++  M+ +G E D   + ++L ACA +     G+ +  
Sbjct: 269 IVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWVQE 328

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +  + G++ D ++  AL+ MY++CG +  A ++F+ +PNR++ +W+ ++ G    G   E
Sbjct: 329 YIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNRNIFTWNALLGGLAMHGHGHE 388

Query: 156 ALEVMREMRFMDIRPSEVAMISMVS 180
           AL+    M    IRP+EV  +++++
Sbjct: 389 ALKHFELMIGAGIRPNEVTFLAILT 413


>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
 gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
          Length = 828

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 206/605 (34%), Positives = 348/605 (57%), Gaps = 2/605 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  ++S+++ Y++N      L ++  M   G   D+  + ++ +AC ++    L K 
Sbjct: 165 VRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKS 224

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HG+ ++ G+ GD  +SN+LI MYS+CG L  A+ LF+ + +R    W++MI  Y++   
Sbjct: 225 VHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNEC 284

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            EEAL+V  +M+  ++ P++V MIS+++  A +  +  GK++H  V+RN      G+ + 
Sbjct: 285 FEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVT-GLDLG 343

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            ALID YS C  ++  ++L + +   ++VSW  +IS Y R    +E +  FA M+ + + 
Sbjct: 344 PALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIM 403

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P   ++ S I      G +Q G+ +H ++++ GF F   + N+L+DMY KC    SA T+
Sbjct: 404 PDSFSLASSISASASSGSIQFGQQIHGHVMKRGF-FDEFVQNSLMDMYSKCGFASSAYTI 462

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ +K K ++ WN +I  ++Q     +A  LF  M  +++  N+VT +  +  C+  G L
Sbjct: 463 FNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYL 522

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           + GKW+H  I   G + D+ + TALVDMYAKCGD+  A ++F   + + +  W+ M+A +
Sbjct: 523 DKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAH 582

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
           G+HG    A   F  M  S +KPN +TF+ +L+AC HAG V EGK  F+ M    G+VP 
Sbjct: 583 GIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPN 642

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           +EH+  +VDLL RAG ++ A+E+IKS+       +WGALL   +++    M E  A ++ 
Sbjct: 643 VEHFASIVDLLSRAGDINGAYEIIKSIRTPVAASIWGALLNGCRIYGRMDMIEYIAEELG 702

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
            I   + GY  L+SNIYA    W +   VR  M+ + +KK PG+S+VE++  +++F  G 
Sbjct: 703 GISTDDTGYYTLLSNIYAEGGNWYESRKVRSKMEGMGLKKVPGYSTVEIDRKIYRFGSGD 762

Query: 633 MVNWK 637
              W+
Sbjct: 763 TSEWQ 767



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 157/540 (29%), Positives = 296/540 (54%), Gaps = 17/540 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN---FTIPTILKACAQVLMTHLGKEIHG 95
           ++ L+  ++ N+     L+++    + GS++     F  P++++A   V    +G+++HG
Sbjct: 67  FSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHG 126

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K+G   D  +  +L+ MY E   L  A+ +FDEM  RD+V WS++I  Y   G+  E
Sbjct: 127 RILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYRE 186

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV-AIATA 214
            LE+ R M    IRP  V ++S+      +  + L K++H  V+R   +  +G  +++ +
Sbjct: 187 GLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMR---EGMVGDGSLSNS 243

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LI MYS+CG L  AK+LF  ++  S   WT MIS Y +     E + +F +M +  V P+
Sbjct: 244 LIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPN 303

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS-LAMANALVDMYGKCREIRSARTLF 333
           ++T++S++  C  +G L+ GK +H ++LRN    + L +  AL+D Y  C ++ S   L 
Sbjct: 304 DVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLL 363

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
             + +++++ WN +IS YA+    D+A   F  M    + P+  ++   +S    +G+++
Sbjct: 364 HSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQ 423

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            G+ +H ++ K+G   D  ++ +L+DMY+KCG  + AY +F++  ++ I  WN M+ G+ 
Sbjct: 424 FGQQIHGHVMKRGF-FDEFVQNSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFS 482

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +G   EAL  F +M ++ ++ N +TF+  + ACS+ G + +GK +  K++   G    +
Sbjct: 483 QNGISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKII-VTGNQNDL 541

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI-AATQIL 572
                +VD+  + G L  A ++  S+ +  +++ W  ++AA  +H     G+I AAT + 
Sbjct: 542 YIDTALVDMYAKCGDLQTAQKVFDSI-VEKSVVSWSTMIAAHGIH-----GQINAATSLF 595



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 208/391 (53%), Gaps = 10/391 (2%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           ++H   +   L  +   S  L++ YS+ GSL S+R +F   P+ D   +S +I+ +    
Sbjct: 19  QLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLIKCHLWNH 78

Query: 152 LPEEALEVMREMRFMDIRPSEVAMI---SMVSLFADVADVDLGKAIHACVVRN--CKDEK 206
           L  E L +      M  + ++       S++     V ++ +G+ +H  ++++  C+D  
Sbjct: 79  LFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGRKLHGRILKSGFCEDRV 138

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
           +G    T+L+ MY +   L  AK++F+ +    +V W+ +IS Y+      EG+ +F  M
Sbjct: 139 IG----TSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSM 194

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
           I E + P  + +LS+   CG +G L+L K +H Y++R G     +++N+L+ MY +C  +
Sbjct: 195 ICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYL 254

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             A+ LF+ +  +    W ++ISAY Q  C ++A ++FI M+ S+V PN+VTM+ +L+ C
Sbjct: 255 CRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSC 314

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVI-LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
              G L+ GK +H ++ +  + V  + L  AL+D Y+ C  ++   +L       +I  W
Sbjct: 315 ARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSW 374

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           N +++ Y   G  +EA+ FF  M   G+ P+
Sbjct: 375 NTLISFYAREGLNDEAMAFFACMVAKGIMPD 405



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/351 (27%), Positives = 183/351 (52%), Gaps = 16/351 (4%)

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE--- 268
           +T L++ YS+ G+L  ++ +F          ++V+I  ++  +   E + LF   I+   
Sbjct: 36  STKLLESYSQMGSLQSSRLVFYTHPSPDSFMFSVLIKCHLWNHLFREVLSLFNHHIQMGS 95

Query: 269 ---EN---VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
              +N   ++PS I  ++       VG L +G+ LH  IL++GF     +  +LV MYG+
Sbjct: 96  KLTQNCAFLYPSVIRAVT------GVGELIVGRKLHGRILKSGFCEDRVIGTSLVGMYGE 149

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
              +R A+ +FD M  +D+++W+++IS Y +     +  E+F  M    +RP+ V ++ +
Sbjct: 150 LCFLRDAKKVFDEMCVRDLVLWSSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSV 209

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
              C + G L + K +H Y+ ++G+  D  L  +L+ MY++CG +  A RLF     R  
Sbjct: 210 AEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRST 269

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             W +M++ Y  + C EEAL  F+ M+ S V+PN +T I +LN+C+  G + EGKSV   
Sbjct: 270 SCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCF 329

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           ++     V  ++    ++D       +    +++ S+    N++ W  L++
Sbjct: 330 VLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIG-NENIVSWNTLIS 379


>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
 gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
          Length = 857

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/591 (35%), Positives = 335/591 (56%), Gaps = 3/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N +V  Y K      AL++Y  M   G   D +T P +L+ C  +    +G+E+H   +
Sbjct: 165 WNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVL 224

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G   +  V NAL+ MY++CG +V+AR +FD M   D +SW+ MI G+      E  LE
Sbjct: 225 RFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLE 284

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M   +++P+ + + S+      +++V   K +H   V+  +   + VA   +LI M
Sbjct: 285 LFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVK--RGFAIDVAFCNSLIQM 342

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+  G +  A ++F+R+     +SWT MISGY +    ++ + ++A M   NV P ++TI
Sbjct: 343 YTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDDVTI 402

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +  C  +G L +G  LH      GF   + +ANAL++MY K + I  A  +F  M  
Sbjct: 403 ASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAE 462

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KDV+ W+++I+ +   H   +A   F +M +  V+PN VT +  LS C   GAL  GK +
Sbjct: 463 KDVVSWSSMIAGFCFNHRSFEALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGKEI 521

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H Y+ + G+  +  +  AL+D+Y KCG  + A+  FS    +D+  WN M++G+  HG G
Sbjct: 522 HAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLG 581

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           + AL  F  M   G  P+ +TF+ LL ACS AG+V +G  +F  M     +VP ++HY C
Sbjct: 582 DIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYAC 641

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLL R G L EA+ +I  MP++P+  VWGALL   ++H++  +GE+AA  ILE+EP +
Sbjct: 642 MVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPND 701

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
             Y+VL+ ++Y  A +W  VA VR+ M+E  ++++ G S VEV G+ H F+
Sbjct: 702 VAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFL 752



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 134/423 (31%), Positives = 225/423 (53%), Gaps = 18/423 (4%)

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
           ++ACA+    H       F ++ G        NA++ M    G +  A  +F +MP RDV
Sbjct: 116 MRACARADAEH-----PSFGLRLG--------NAMLSMLVRFGEIWHAWRVFAKMPERDV 162

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
            SW+ M+ GY + G  EEAL++   M +  +RP       ++     + D  +G+ +HA 
Sbjct: 163 FSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAH 222

Query: 198 VVR-NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
           V+R    DE   V +  AL+ MY+KCG++  A+++F+ +     +SW  MI+G+   +E 
Sbjct: 223 VLRFGFGDE---VDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFENHEC 279

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
             G+ LF  M+E  V P+ +TI S+ +  G +  +   K +H + ++ GF   +A  N+L
Sbjct: 280 EAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSL 339

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           + MY     +  A  +F  M++KD M W A+IS Y +    DKA E++  M++  V P++
Sbjct: 340 IQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVSPDD 399

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           VT+   L+ C   G L++G  LH   + +G    V++  AL++MYAK   ++ A  +F  
Sbjct: 400 VTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKF 459

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
              +D+  W++M+AG+  +    EAL +F  M    VKPN +TFI  L+AC+  G +  G
Sbjct: 460 MAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSG 518

Query: 497 KSV 499
           K +
Sbjct: 519 KEI 521



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 199/384 (51%), Gaps = 4/384 (1%)

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           P E A +++  L      VD G  + AC   + +    G+ +  A++ M  + G + +A 
Sbjct: 94  PDEGAYVALFRLCEWRRAVDAG--MRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAW 151

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           ++F ++ +  V SW VM+ GY +   + E + L+  M+   + P   T   ++  CG + 
Sbjct: 152 RVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIP 211

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
             ++G+ +HA++LR GF   + + NALV MY KC +I +AR +FDGM   D + WNA+I+
Sbjct: 212 DWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIA 271

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
            + + H  +   ELF+ M  ++V+PN +T+  +         +   K +H +  K+G  +
Sbjct: 272 GHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAI 331

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           DV    +L+ MY   G +  A ++FS    +D   W AM++GY  +G  ++AL  +  ME
Sbjct: 332 DVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALME 391

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
              V P+ +T    L AC+  G +  G  + + +    G +  +     ++++  ++  +
Sbjct: 392 LHNVSPDDVTIASALAACACLGRLDVGIKLHE-LAQNKGFIRYVVVANALLEMYAKSKHI 450

Query: 530 DEAHEMIKSMPLRPNMIVWGALLA 553
           D+A E+ K M  + +++ W +++A
Sbjct: 451 DKAIEVFKFMAEK-DVVSWSSMIA 473


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 200/548 (36%), Positives = 323/548 (58%), Gaps = 15/548 (2%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           ++IH   +  GL    ++   LI   S  G +  AR +FD++P   V  W+ +IRGY R 
Sbjct: 38  RQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRN 97

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG-- 208
              ++AL +  +M+   + P       ++     ++ + +G+ +HA V R      LG  
Sbjct: 98  NHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFR------LGFE 151

Query: 209 --VAIATALIDMYSKCGNLAYAKQLFN--RLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
             V +   LI +Y+KC  L  A+ +F    L + ++VSWT ++S Y +  E  E + +F+
Sbjct: 152 ADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFS 211

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           +M + +V P  + ++S++     +  L+ G+ +HA +++ G E    +  +L  MY KC 
Sbjct: 212 QMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCG 271

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
           ++ +A+ LFD MKS ++++WNA+IS YA+      A +LF  M    VRP+ +++   +S
Sbjct: 272 QVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAIS 331

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
            C + G+LE  +W+  Y+ +     DV + +AL+DM+AKCG V  A  +F   + RD+ +
Sbjct: 332 ACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVV 391

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           W+AM+ GYG+HG   EA+  +  MER GV PN +TF+GLL AC+H+G+V EG   F++M 
Sbjct: 392 WSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMA 451

Query: 505 -HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
            H +   P+ +HY C++DLLGRAG LD+A+E+IK MP++P + VWGALL+A K H++  +
Sbjct: 452 DHKIN--PQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVEL 509

Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
           G+ AA Q+  I+P N G+ V +SN+YA A  W+ VA VR  MKE  + K+ G S VEV G
Sbjct: 510 GKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRG 569

Query: 624 LVHKFIRG 631
            +  F  G
Sbjct: 570 RLEGFRVG 577



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 141/471 (29%), Positives = 250/471 (53%), Gaps = 29/471 (6%)

Query: 12  QTRQCHAHIIKTHFKFS---YTNIINPLTRY---------------------NSLVTSYI 47
           Q RQ HA ++    +FS    T +I+  + Y                     N+++  Y 
Sbjct: 36  QLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPWNAIIRGYS 95

Query: 48  KNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAY 107
           +NN    AL +Y+ M+      D+FT P +LKAC  +    +G+ +H    + G + D +
Sbjct: 96  RNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVF 155

Query: 108 VSNALIQMYSECGSLVSARYLFD--EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
           V N LI +Y++C  L  AR +F+   +P R +VSW+ ++  Y + G P EALE+  +MR 
Sbjct: 156 VQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRK 215

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
           MD++P  VA++S+++ F  + D++ G++IHA V++   + +  + I  +L  MY+KCG +
Sbjct: 216 MDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLI--SLNTMYAKCGQV 273

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
           A AK LF+++   +++ W  MISGY +     + + LF EMI ++V P  I+I S I  C
Sbjct: 274 ATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISAC 333

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
             VG L+  +W+  Y+ R+ +   + +++AL+DM+ KC  +  AR++FD    +DV++W+
Sbjct: 334 AQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWS 393

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
           A+I  Y       +A  L+  M+   V PN+VT +GLL  C  +G +  G W    +   
Sbjct: 394 AMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADH 453

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFS-EAIYRDICMWNAMMAGYGMH 455
            +         ++D+  + G ++ AY +     +   + +W A+++    H
Sbjct: 454 KINPQQQHYACIIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 206/591 (34%), Positives = 333/591 (56%), Gaps = 4/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y+KN   +SAL  +  MR +  + ++ +   +L  CA   +   G ++HG  I
Sbjct: 246 WNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVI 305

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++G + D  V+N +I MYS+CG+L  AR +FD MP  D V+W+ +I GY + G  +EA+ 
Sbjct: 306 RSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVA 365

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + + M    ++   +   S +        +   K +H+ +VR+       V + +AL+D+
Sbjct: 366 LFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRH--GVPFDVYLKSALVDI 423

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-EGVRLFAEMIEENVFPSEIT 277
           Y K G++  A + F +     V   T MISGY+  N +N E + LF  +I+E + P+ +T
Sbjct: 424 YFKGGDVEMACKTFQQNTLVDVAVCTAMISGYV-LNGLNVEALNLFRWLIQEGMVPNCLT 482

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           + S++  C  +  L+LGK LH  IL+ G E    + +++  MY K   +  A   F  M 
Sbjct: 483 MASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMP 542

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KD + WN +I +++Q    + A +LF  M  S  + + V++   LS C    AL  GK 
Sbjct: 543 VKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKE 602

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH ++ +     D  + + L+DMY+KCG +  A  +F    +++   WN+++A YG HG 
Sbjct: 603 LHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGR 662

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
             E L  F +M  +G++P+ +TF+ +++AC HAGLV EG   F  M    G+  ++EH+ 
Sbjct: 663 PRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFA 722

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDL GRAG L EA + IKSMP  P+   WG+LL A +LH N  + ++A+  ++E++P 
Sbjct: 723 CMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPN 782

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           N GY VL+SN++A A  W  V  VR +MKE  V+K PG+S ++VNG  H F
Sbjct: 783 NSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMF 833



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 161/530 (30%), Positives = 270/530 (50%), Gaps = 8/530 (1%)

Query: 61  FMRKNGSEV--DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSE 118
           F R  GS V  D +T P ++KAC  +    L K +H  A   G   D ++ ++LI++Y++
Sbjct: 165 FFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTD 224

Query: 119 CGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISM 178
            G +  A+YLFDE+P RD + W+ M+ GY + G    AL   +EMR   ++P+ V+ + +
Sbjct: 225 NGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCL 284

Query: 179 VSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
           +S+ A    V  G  +H  V+R+  +      +A  +I MYSKCGNL  A+++F+ + Q 
Sbjct: 285 LSVCATRGIVRAGIQLHGLVIRSGFESD--PTVANTIITMYSKCGNLFDARKIFDIMPQT 342

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
             V+W  +I+GY++    +E V LF  M+   V    IT  S +      G L+  K +H
Sbjct: 343 DTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVH 402

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
           +YI+R+G  F + + +ALVD+Y K  ++  A   F      DV +  A+IS Y       
Sbjct: 403 SYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNV 462

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALV 418
           +A  LF  +    + PN +TM  +L  C    +L++GK LH  I K+GLE    + +++ 
Sbjct: 463 EALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSIT 522

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
            MYAK G ++ AY+ F     +D   WN M+  +  +G  E A+  F  M  SG K + +
Sbjct: 523 YMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSV 582

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           +    L+AC++   +  GK +   +V     +        ++D+  + G L  A  +   
Sbjct: 583 SLSATLSACANYPALYYGKELHCFVVRN-SFISDTFVASTLIDMYSKCGKLALARSVFDM 641

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMS 586
           M  + N + W +++AA   H  P        +++E  I+P +  + V+MS
Sbjct: 642 MDWK-NEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMS 690



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 239/475 (50%), Gaps = 6/475 (1%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           ++IH   +  G++G   + + ++ MY  C S      LF  +     + W+ +IRG+   
Sbjct: 96  RQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           G  + AL     M   ++ P +     ++     + +V L K +H   +       + + 
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHE--LARSMGFHMDLF 213

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           I ++LI +Y+  G +  AK LF+ L     + W VM++GY++  + N  +  F EM    
Sbjct: 214 IGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSC 273

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           V P+ ++ + L+  C   G ++ G  LH  ++R+GFE    +AN ++ MY KC  +  AR
Sbjct: 274 VKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDAR 333

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +FD M   D + WN +I+ Y Q    D+A  LF  M  S V+ + +T    L    ++G
Sbjct: 334 KIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSG 393

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           +L+  K +H+YI + G+  DV LK+ALVD+Y K GDV  A + F +    D+ +  AM++
Sbjct: 394 SLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMIS 453

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF-DKMVHGLGL 509
           GY ++G   EAL  F  + + G+ PN +T   +L AC+    +  GK +  D +  GL  
Sbjct: 454 GYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLEN 513

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
           V ++     +  +  ++G LD A++  + MP++ + + W  ++ +   +  P + 
Sbjct: 514 VCQVG--SSITYMYAKSGRLDLAYQFFRRMPVK-DSVCWNLMIVSFSQNGKPELA 565


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 225/629 (35%), Positives = 335/629 (53%), Gaps = 51/629 (8%)

Query: 52  PSSALNIYAFMRKNGSE--VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVS 109
           P S L + +F   +     V +    T+L  C + L T   K+IH   IK GL    +  
Sbjct: 7   PVSTLQVLSFSDPSPPYKLVHDHPSLTLLSNC-KTLQTL--KQIHSQIIKTGLHNTHFAL 63

Query: 110 NALIQM--YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           + LI+    S  G L  A  LF  + N + V W+ MIRG      P  ALE    M    
Sbjct: 64  SKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSG 123

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCG 223
             P+E    S+      +     GK +HA V+      KLG+     + T+LI+MY++ G
Sbjct: 124 TEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVL------KLGLEHNAFVHTSLINMYAQNG 177

Query: 224 NLA-------------------------------YAKQLFNRLNQNSVVSWTVMISGYIR 252
            L                                 A++LF+ +    VVSW  MISGY +
Sbjct: 178 ELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQ 237

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGG-LQLGKWLHAYILRNGFEFSLA 311
              + E +  F EM    V P+  T+LS++  C   G  LQLG W+ ++I   G   ++ 
Sbjct: 238 SGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIR 297

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           + N L+DMY KC ++  A  LF+ ++ K+V+ WN +I  Y    C  +A  LF  M  S 
Sbjct: 298 LVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSN 357

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK--QGLEVDVILKTALVDMYAKCGDVNG 429
           + PN+VT + +L  C   GAL++GKW+H Y++K  + ++  V L T+L+DMYAKCGD+  
Sbjct: 358 IDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAV 417

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A R+F     + +  WNAM++G+ MHG  + AL  F  M   G  P+ ITF+G+L AC H
Sbjct: 418 AKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKH 477

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           AGL++ G+  F  M+    + PK+ HYGCM+DL GRAGL DEA  ++K+M ++P+  +W 
Sbjct: 478 AGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWC 537

Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR 609
           +LL A ++H+   + E  A  + E+EP+N    VL+SNIYA A RW DVA +R  + + R
Sbjct: 538 SLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNR 597

Query: 610 VKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           +KK PG SS+EV+ +VH+F+ G  V+ +S
Sbjct: 598 MKKVPGCSSIEVDSVVHEFLVGDKVHPQS 626



 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/542 (30%), Positives = 264/542 (48%), Gaps = 101/542 (18%)

Query: 9   NLEQTRQCHAHIIKT-----HFKFS--------------------YTNIINP-LTRYNSL 42
            L+  +Q H+ IIKT     HF  S                    +  I NP    +N +
Sbjct: 40  TLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNPNHVIWNHM 99

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           +     +  P  AL  Y  M  +G+E + +T P+I K+C ++   H GK++H   +K GL
Sbjct: 100 IRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGL 159

Query: 103 DGDAYVSNALIQMYSECGSLVSARY-------------------------------LFDE 131
           + +A+V  +LI MY++ G LV+AR                                LFDE
Sbjct: 160 EHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDE 219

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV-ADVDL 190
           +P RDVVSW+ MI GY + G  EEA+    EMR   + P+   M+S++S  A   + + L
Sbjct: 220 IPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQL 279

Query: 191 GKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
           G  + + +    +D  LG  + +   LIDMY KCG+L  A  LF ++   +VVSW VMI 
Sbjct: 280 GNWVRSWI----EDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIG 335

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN--GF 306
           GY   +   E + LF  M++ N+ P+++T LS++  C  +G L LGKW+HAY+ +N    
Sbjct: 336 GYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSM 395

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
           + ++A+  +L+DMY KC ++  A+ +FD M +K +  WNA+IS +A     D A  LF  
Sbjct: 396 KNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSR 455

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
           M      P+++T VG+L+ C  AG L +G ++  + I+   +   +     ++D++ + G
Sbjct: 456 MTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAG 515

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
                  LF EA                      E L+  ++M     KP+G  +  LL 
Sbjct: 516 -------LFDEA----------------------ETLVKNMEM-----KPDGAIWCSLLG 541

Query: 486 AC 487
           AC
Sbjct: 542 AC 543


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 213/607 (35%), Positives = 345/607 (56%), Gaps = 5/607 (0%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           F    + NP+T + +++T Y +  +   AL ++  M  +G   D F + + + AC+ +  
Sbjct: 172 FDALPVKNPVT-WTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGF 230

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
              G++ HG+A +  ++ DA V NALI +Y +C  L  AR LFD M NR++VSW+TMI G
Sbjct: 231 LEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAG 290

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDE 205
           Y +     EA+ +  ++     +P   A  S+++    +A +  G+ +HA  ++ N + +
Sbjct: 291 YMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESD 350

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           +    +  +LIDMY+KC +L  A+ +F  L ++  +S+  MI GY R  ++   + +F++
Sbjct: 351 EY---VKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSK 407

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M   ++ PS +T +SL+        ++L K +H  I+++G    L   ++L+D+Y K   
Sbjct: 408 MRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSL 467

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           +  A+ +F+ M ++D++IWNA+I   AQ    ++A +LF  ++VS + PNE T V L+++
Sbjct: 468 VEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTV 527

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
            +   ++  G+  H  I K G + D  +  AL+DMYAKCG +     LF   + +D+  W
Sbjct: 528 ASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICW 587

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           N+M++ Y  HG  EEAL  F  M  +GV+PN +TF+G+L+AC+HAGLV EG   FD M  
Sbjct: 588 NSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKT 647

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
              + P  EHY  +V+L GR+G L  A E I+ MP+ P   VW +LL+A  L  N  +G 
Sbjct: 648 KYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGR 707

Query: 566 IAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLV 625
            A    L  +P + G +VLMSNIYA    W+D   +R+ M    V KEPG+S +EV   V
Sbjct: 708 YATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSWIEVMKEV 767

Query: 626 HKFIRGG 632
           H FI  G
Sbjct: 768 HTFIARG 774



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 150/525 (28%), Positives = 282/525 (53%), Gaps = 6/525 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYA-FMRKNGSEVDN-FTIPTILKACAQVLMTHLGKEI 93
           L  + S ++ + ++     A+ ++A F R +G E  N F + + L+ACAQ      G+++
Sbjct: 77  LVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQV 136

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG A++ GLDG+ YV  ALI +Y++ G + +A  +FD +P ++ V+W+ +I GY + G  
Sbjct: 137 HGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQG 196

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
             ALE+  +M    +RP    + S VS  + +  ++ G+  H    R   +     ++  
Sbjct: 197 GVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETD--ASVIN 254

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALID+Y KC  L+ A++LF+ +   ++VSWT MI+GY++ +   E + +F ++ +E   P
Sbjct: 255 ALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQP 314

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
                 S++  CG +  +  G+ +HA+ ++   E    + N+L+DMY KC  +  AR +F
Sbjct: 315 DVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVF 374

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + +   D + +NA+I  Y++   +  A ++F  M+   ++P+ +T V LL + +   A+E
Sbjct: 375 EALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIE 434

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           + K +H  I K G  +D+   ++L+D+Y+K   V  A  +F+    RD+ +WNAM+ G  
Sbjct: 435 LSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLA 494

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +  GEEA+  F  ++ SG+ PN  TF+ L+   S    +  G+    +++   G     
Sbjct: 495 QNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKA-GADSDH 553

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
                ++D+  + G + E   + +S  L  ++I W ++++    H
Sbjct: 554 HVSNALIDMYAKCGFIKEGRLLFES-TLGKDVICWNSMISTYAQH 597



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 134/465 (28%), Positives = 231/465 (49%), Gaps = 14/465 (3%)

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           H  A+  G   D +++N L++ YS+ G +  AR LFD MP++++VSW + I  + + G  
Sbjct: 34  HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93

Query: 154 EEALEVMREMRFMD--IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
           E+A+ +    +       P+E  + S +   A    V  G+ +H   VR   D    V +
Sbjct: 94  EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGN--VYV 151

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
            TALI++Y+K G +  A  +F+ L   + V+WT +I+GY +  +    + LF +M  + V
Sbjct: 152 GTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGV 211

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P    + S +  C  +G L+ G+  H Y  R   E   ++ NAL+D+Y KC  +  AR 
Sbjct: 212 RPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARK 271

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           LFD M++++++ W  +I+ Y Q  C  +A  +F  +     +P+      +L+ C    A
Sbjct: 272 LFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAA 331

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           +  G+ +H +  K  LE D  +K +L+DMYAKC  +  A  +F      D   +NAM+ G
Sbjct: 332 IWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEG 391

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL---- 507
           Y   G    A+  F  M    +KP+ +TF+ LL   S    +        K +HGL    
Sbjct: 392 YSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIE-----LSKQIHGLIVKS 446

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           G    +     ++D+  +  L+++A  +   M  R +M++W A++
Sbjct: 447 GTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNR-DMVIWNAMI 490


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 203/593 (34%), Positives = 334/593 (56%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L++ + +      AL I+  M+ +G   D  TI ++L ACA +     G ++H +  
Sbjct: 212 FNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLF 271

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+  D  +  +L+ +Y +CG + +A  +F+     +VV W+ M+  + +     ++ E
Sbjct: 272 KAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFE 331

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+   IRP++     ++       ++DLG+ IH+  V+   +  +   ++  LIDM
Sbjct: 332 LFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDM--YVSGVLIDM 389

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSK G L  A+++   L +  VVSWT MI+GY++     + +  F EM +  ++P  I +
Sbjct: 390 YSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGL 449

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S I  C  +  ++ G  +HA I  +G+   +++ NALV++Y +C  IR A + F+ ++ 
Sbjct: 450 ASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEH 509

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN ++S +AQ+   ++A ++F+ M  S V+ N  T V  LS       ++ GK +
Sbjct: 510 KDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQI 569

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + K G   +  +  AL+ +Y KCG    A   FSE   R+   WN ++     HG G
Sbjct: 570 HARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRG 629

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F  M++ G+KPN +TFIG+L ACSH GLV EG S F  M    G+ P+ +HY C
Sbjct: 630 LEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC 689

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           ++D+ GRAG LD A + I+ MP+  + +VW  LL+A K+HKN  +GE AA  +LE+EP +
Sbjct: 690 VIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHD 749

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VL+SN YAV  +W +   VR++M++  V+KEPG S +EV  +VH F  G
Sbjct: 750 SASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVG 802



 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 274/522 (52%), Gaps = 12/522 (2%)

Query: 41  SLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
           ++++ Y +N     AL +Y  M + G     + + ++L +C +  +   G+ IH    K+
Sbjct: 113 AMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKH 172

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G   + +V NA+I +Y  CGS   A  +F +MP+RD V+++T+I G+ + G  E ALE+ 
Sbjct: 173 GFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIF 232

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALI 216
            EM+F  + P  V + S+++  A + D+  G  +H+ +       K G++    +  +L+
Sbjct: 233 EEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLF------KAGISSDYIMEGSLL 286

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           D+Y KCG++  A  +FN  ++ +VV W +M+  + + N++ +   LF +M    + P++ 
Sbjct: 287 DLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQF 346

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T   ++  C     + LG+ +H+  ++ GFE  + ++  L+DMY K   +  AR + + +
Sbjct: 347 TYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEML 406

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           K KDV+ W ++I+ Y Q  C   A   F  M+   + P+ + +   +S C    A+  G 
Sbjct: 407 KEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL 466

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H  I   G   DV +  ALV++YA+CG +  A+  F E  ++D   WN +++G+   G
Sbjct: 467 QIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSG 526

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             EEAL  F+ M++SGVK N  TF+  L+A ++   + +GK +  +++   G   + E  
Sbjct: 527 LHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIK-TGHSFETEVG 585

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             ++ L G+ G  ++A      M  R N + W  ++ +   H
Sbjct: 586 NALISLYGKCGSFEDAKMEFSEMSER-NEVSWNTIITSCSQH 626



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 147/524 (28%), Positives = 269/524 (51%), Gaps = 12/524 (2%)

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC-AQVLMTHLGKEIHGFAIKNG 101
           +  ++ +  P+  L+++A   +    +        L+AC        +  EIH  A+  G
Sbjct: 13  LAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRG 72

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
           L     V N LI +YS+ G ++ AR +F+E+  RD VSW  M+ GY + GL EEAL + R
Sbjct: 73  LGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYR 132

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALIDMY 219
           +M    + P+   + S++S          G+ IHA   ++  C +    + +  A+I +Y
Sbjct: 133 QMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSE----IFVGNAVITLY 188

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            +CG+   A+++F  +     V++  +ISG+ +C      + +F EM    + P  +TI 
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTIS 248

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           SL+  C  +G LQ G  LH+Y+ + G      M  +L+D+Y KC ++ +A  +F+     
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           +V++WN ++ A+ Q + + K+FELF  M+ + +RPN+ T   +L  CT    +++G+ +H
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIH 368

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
           +   K G E D+ +   L+DMY+K G +  A R+      +D+  W +M+AGY  H C +
Sbjct: 369 SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCK 428

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           +AL  F +M++ G+ P+ I     ++ C+    + +G  +  + ++  G    +  +  +
Sbjct: 429 DALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHAR-IYVSGYSGDVSIWNAL 487

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL---AASKLHKN 560
           V+L  R G + EA    + +  + + I W  L+   A S LH+ 
Sbjct: 488 VNLYARCGRIREAFSSFEEIEHK-DEITWNGLVSGFAQSGLHEE 530



 Score = 43.9 bits (102), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 69/163 (42%), Gaps = 28/163 (17%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTNIINPL-------------------------TRYNSLV 43
            ++Q +Q HA +IKT   F  T + N L                           +N+++
Sbjct: 562 EIKQGKQIHARVIKTGHSFE-TEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTII 620

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG-KEIHGFAIKNGL 102
           TS  ++ +   AL+++  M+K G + ++ T   +L AC+ V +   G       + + G+
Sbjct: 621 TSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGI 680

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMI 144
                    +I ++   G L  A+   +EMP   D + W T++
Sbjct: 681 RPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLL 723


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  389 bits (1000), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 215/606 (35%), Positives = 339/606 (55%), Gaps = 3/606 (0%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           F    +  P+T +N+++T Y +      AL ++  M   G   D F + + + AC+ +  
Sbjct: 178 FHALPVRTPVT-WNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGF 236

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
              G++IHG+A ++  + D  V N LI +Y +C  L +AR LFD M  R++VSW+TMI G
Sbjct: 237 LEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISG 296

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           Y +     EA+ +   M     +P   A  S+++    +A +  G+ IHA V++   D +
Sbjct: 297 YMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIK--ADLE 354

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
               +  ALIDMY+KC +L  A+ +F+ L ++  +S+  MI GY +  ++ E V +F  M
Sbjct: 355 ADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRM 414

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
              ++ PS +T +SL+        ++L K +H  I+++G    L  A+AL+D+Y KC  +
Sbjct: 415 RFFSLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLV 474

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             A+T+F+ +  KD++IWN++I  +AQ    ++A +LF  + +S + PNE T V L+++ 
Sbjct: 475 NDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVA 534

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
           +   ++  G+  H +I K G++ D  +  AL+DMYAKCG +     LF      D+  WN
Sbjct: 535 STLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWN 594

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           +M+  Y  HG  EEAL  F  M  + V+PN +TF+G+L+AC+HAG V EG + F+ M   
Sbjct: 595 SMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSN 654

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
             + P IEHY  +V+L GR+G L  A E I+ MP++P   VW +LL+A  L  N  +G  
Sbjct: 655 YDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRY 714

Query: 567 AATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVH 626
           AA   L  +P + G  VL+SNIYA    W DV  +R+ M      KE G S +EV   VH
Sbjct: 715 AAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVH 774

Query: 627 KFIRGG 632
            FI  G
Sbjct: 775 TFIVRG 780



 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 163/554 (29%), Positives = 293/554 (52%), Gaps = 22/554 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN-FTIPTILKACAQVLMTHLGKEIH 94
           L  + S+++ Y ++ +   A++++   +K   EV N F + ++L+AC Q     LG+++H
Sbjct: 84  LVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVH 143

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           G A+K  LD + YV  ALI +Y++ G +  A  +F  +P R  V+W+T+I GY + G   
Sbjct: 144 GIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGG 203

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
            ALE+   M    +RP    + S VS  + +  ++ G+ IH    R+  +     ++   
Sbjct: 204 VALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETD--TSVINV 261

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LID+Y KC  L+ A++LF+ +   ++VSWT MISGY++ +   E + +F  M +    P 
Sbjct: 262 LIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPD 321

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
                S++  CG +  +  G+ +HA++++   E    + NAL+DMY KC  +  AR +FD
Sbjct: 322 GFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFD 381

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            +   D + +NA+I  Y++   + +A  +F  M+   +RP+ +T V LL + +   A+E+
Sbjct: 382 ALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIEL 441

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
            K +H  I K G  +D+   +AL+D+Y+KC  VN A  +F+   Y+D+ +WN+M+ G+  
Sbjct: 442 SKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQ 501

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKI 513
           +  GEEA+  F  +  SG+ PN  TF+ L+   S    +  G+     ++  G+   P +
Sbjct: 502 NEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDNDPHV 561

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS--------MGE 565
            +   ++D+  + G + E   + +S     ++I W +++     H +          MGE
Sbjct: 562 SN--ALIDMYAKCGFIKEGRMLFEST-CGEDVICWNSMITTYAQHGHAEEALQVFRLMGE 618

Query: 566 IAATQILEIEPQNY 579
                  E+EP NY
Sbjct: 619 A------EVEP-NY 625



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 144/507 (28%), Positives = 250/507 (49%), Gaps = 26/507 (5%)

Query: 76  TILKACAQVLMT----------HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSA 125
           T +++ A+VL++           L   IH  A   G   D +++N L++ YS  G L  A
Sbjct: 13  THIRSLARVLLSCLPTGGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDA 72

Query: 126 RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR-PSEVAMISMVSLFAD 184
           R+LFD MP+R++VSW ++I  Y + G  + A+ +    +      P+E  + S++     
Sbjct: 73  RHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQ 132

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
              V LG+ +H   V+   D    V + TALI++Y+K G +  A  +F+ L   + V+W 
Sbjct: 133 SKAVSLGEQVHGIAVK--LDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWN 190

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
            +I+GY +       + LF  M  E V P    + S +  C  +G L+ G+ +H Y  R+
Sbjct: 191 TVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRS 250

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
             E   ++ N L+D+Y KC  + +AR LFD M+ ++++ W  +IS Y Q     +A  +F
Sbjct: 251 ATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMF 310

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC 424
            +M  +  +P+      +L+ C    A+  G+ +H ++ K  LE D  +K AL+DMYAKC
Sbjct: 311 WNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKC 370

Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
             +  A  +F      D   +NAM+ GY  +    EA+  F  M    ++P+ +TF+ LL
Sbjct: 371 EHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLL 430

Query: 485 NACSHAGLVTEGKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
              S + L  E      K +HGL    G    +     ++D+  +  L+++A  +   + 
Sbjct: 431 GVSS-SQLAIE----LSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLH 485

Query: 541 LRPNMIVWGALLAASKLHKNPSMGEIA 567
            + +M++W +++     H     GE A
Sbjct: 486 YK-DMVIWNSMIFG---HAQNEQGEEA 508


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 203/593 (34%), Positives = 334/593 (56%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L++ + +      AL I+  M+ +G   D  TI ++L ACA +     G ++H +  
Sbjct: 212 FNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLF 271

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+  D  +  +L+ +Y +CG + +A  +F+     +VV W+ M+  + +     ++ E
Sbjct: 272 KAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFE 331

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+   IRP++     ++       ++DLG+ IH+  V+   +  +   ++  LIDM
Sbjct: 332 LFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDM--YVSGVLIDM 389

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSK G L  A+++   L +  VVSWT MI+GY++     + +  F EM +  ++P  I +
Sbjct: 390 YSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGL 449

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S I  C  +  ++ G  +HA I  +G+   +++ NALV++Y +C  IR A + F+ ++ 
Sbjct: 450 ASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEH 509

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN ++S +AQ+   ++A ++F+ M  S V+ N  T V  LS       ++ GK +
Sbjct: 510 KDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQI 569

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + K G   +  +  AL+ +Y KCG    A   FSE   R+   WN ++     HG G
Sbjct: 570 HARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRG 629

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F  M++ G+KPN +TFIG+L ACSH GLV EG S F  M    G+ P+ +HY C
Sbjct: 630 LEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC 689

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           ++D+ GRAG LD A + I+ MP+  + +VW  LL+A K+HKN  +GE AA  +LE+EP +
Sbjct: 690 VIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHD 749

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VL+SN YAV  +W +   VR++M++  V+KEPG S +EV  +VH F  G
Sbjct: 750 SASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVG 802



 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 274/522 (52%), Gaps = 12/522 (2%)

Query: 41  SLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
           ++++ Y +N     AL +Y  M + G     + + ++L +C +  +   G+ IH    K+
Sbjct: 113 AMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKH 172

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G   + +V NA+I +Y  CGS   A  +F +MP+RD V+++T+I G+ + G  E ALE+ 
Sbjct: 173 GFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIF 232

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALI 216
            EM+F  + P  V + S+++  A + D+  G  +H+ +       K G++    +  +L+
Sbjct: 233 EEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLF------KAGISSDYIMEGSLL 286

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           D+Y KCG++  A  +FN  ++ +VV W +M+  + + N++ +   LF +M    + P++ 
Sbjct: 287 DLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQF 346

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T   ++  C     + LG+ +H+  ++ GFE  + ++  L+DMY K   +  AR + + +
Sbjct: 347 TYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEML 406

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           K KDV+ W ++I+ Y Q  C   A   F  M+   + P+ + +   +S C    A+  G 
Sbjct: 407 KEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL 466

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H  I   G   DV +  ALV++YA+CG +  A+  F E  ++D   WN +++G+   G
Sbjct: 467 QIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSG 526

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             EEAL  F+ M++SGVK N  TF+  L+A ++   + +GK +  +++   G   + E  
Sbjct: 527 LHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIK-TGHSFETEVG 585

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             ++ L G+ G  ++A      M  R N + W  ++ +   H
Sbjct: 586 NALISLYGKCGSFEDAKMEFSEMSER-NEVSWNTIITSCSQH 626



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 147/524 (28%), Positives = 269/524 (51%), Gaps = 12/524 (2%)

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC-AQVLMTHLGKEIHGFAIKNG 101
           +  ++ +  P+  L+++A   +    +        L+AC        +  EIH  A+  G
Sbjct: 13  LAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRG 72

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
           L     V N LI +YS+ G ++ AR +F+E+  RD VSW  M+ GY + GL EEAL + R
Sbjct: 73  LGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYR 132

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALIDMY 219
           +M    + P+   + S++S          G+ IHA   ++  C +    + +  A+I +Y
Sbjct: 133 QMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSE----IFVGNAVITLY 188

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            +CG+   A+++F  +     V++  +ISG+ +C      + +F EM    + P  +TI 
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTIS 248

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           SL+  C  +G LQ G  LH+Y+ + G      M  +L+D+Y KC ++ +A  +F+     
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           +V++WN ++ A+ Q + + K+FELF  M+ + +RPN+ T   +L  CT    +++G+ +H
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIH 368

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
           +   K G E D+ +   L+DMY+K G +  A R+      +D+  W +M+AGY  H C +
Sbjct: 369 SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCK 428

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           +AL  F +M++ G+ P+ I     ++ C+    + +G  +  + ++  G    +  +  +
Sbjct: 429 DALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHAR-IYVSGYSGDVSIWNAL 487

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL---AASKLHKN 560
           V+L  R G + EA    + +  + + I W  L+   A S LH+ 
Sbjct: 488 VNLYARCGRIREAFSSFEEIEHK-DEITWNGLVSGFAQSGLHEE 530



 Score = 43.5 bits (101), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 69/163 (42%), Gaps = 28/163 (17%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTNIINPL-------------------------TRYNSLV 43
            ++Q +Q HA +IKT   F  T + N L                           +N+++
Sbjct: 562 EIKQGKQIHARVIKTGHSFE-TEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTII 620

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG-KEIHGFAIKNGL 102
           TS  ++ +   AL+++  M+K G + ++ T   +L AC+ V +   G       + + G+
Sbjct: 621 TSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGI 680

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMI 144
                    +I ++   G L  A+   +EMP   D + W T++
Sbjct: 681 RPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLL 723


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 204/593 (34%), Positives = 332/593 (55%), Gaps = 4/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL++ Y  N     AL++Y   R  G   D FT+ ++L AC  ++    G  +HG   
Sbjct: 190 WNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIE 249

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+ GD  + N L+ MY +   L  AR +F +M  +D V+W+TMI GY + G  E +++
Sbjct: 250 KIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVK 309

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M      P  +++ S +       D+ +GK +H  ++ +    +        LIDM
Sbjct: 310 LFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGS--GFECDTVACNILIDM 366

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG+L  A+++F+       V+W  +I+GY +     EG+  F  M  E   P  +T 
Sbjct: 367 YAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERK-PDSVTF 425

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           + L+     +  +  G+ +H  +++ GFE  L + N+L+D+Y KC E+     +F  M +
Sbjct: 426 VLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSA 485

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D++ WN VI++          F++   M+   + P+E T++G+L +C+       GK +
Sbjct: 486 HDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEI 545

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H YI K G E +V +  AL++MY+KCG +    ++F     +D+  W A+++ +GM+G G
Sbjct: 546 HGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEG 605

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           ++AL  F DME SGV P+ + FI  + ACSH+G+V EG   FD+M     L P++EHY C
Sbjct: 606 KKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYAC 665

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VDLL R+GLL +A E I SMP++P+  +WGALL+A +   N ++ +  + +ILE+   +
Sbjct: 666 VVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDD 725

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            GY VL+SNIYA   +W+ V  VR  MK   +KKEPG S +E+   V+ F  G
Sbjct: 726 TGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTG 778



 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 174/575 (30%), Positives = 296/575 (51%), Gaps = 39/575 (6%)

Query: 9   NLEQTRQCHAHIIKTHFKFS----------YTNIINPLTR---------------YNSLV 43
           N  Q R  H+ II +    S          Y  + +P++                +NS++
Sbjct: 34  NTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSII 93

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD 103
            +   N   + AL  Y  MR+   + D FT P+++ +CA++L   LG  +H  A++ G +
Sbjct: 94  RALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFE 153

Query: 104 GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
            D Y+ NALI MYS    L +ARY+F+EM NRD VSW+++I GY   G  E+AL++  + 
Sbjct: 154 SDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKF 213

Query: 164 RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMY 219
           R   + P    M S++     +  V  G A+H  +      EK+G+A    I   L+ MY
Sbjct: 214 RMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVI------EKIGIAGDVIIGNGLLSMY 267

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            K   L  A+++F+++     V+W  MI GY +       V+LF +MI+  V P  ++I 
Sbjct: 268 FKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PDMLSIT 326

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           S I  CG  G LQ+GK++H Y++ +GFE      N L+DMY KC ++ +A+ +FD  K K
Sbjct: 327 STIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCK 386

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           D + WN++I+ Y Q+    +  E F  MK+ + +P+ VT V LLS+ ++   +  G+ +H
Sbjct: 387 DSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIH 445

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
             + K G E ++I+  +L+D+YAKCG+++   ++FS     DI  WN ++A         
Sbjct: 446 CDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCT 505

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
                  +M   G+ P+  T +G+L  CS   +  +GK +   +    G    +     +
Sbjct: 506 VGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKS-GFESNVPIGNAL 564

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +++  + G L+   ++ K M  + +++ W AL++A
Sbjct: 565 IEMYSKCGSLENCIKVFKYMKEK-DVVTWTALISA 598



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 242/487 (49%), Gaps = 11/487 (2%)

Query: 72  FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE 131
           F   ++LK  +    T   + +H   I +GL      S  LI  Y++    +S+  +F  
Sbjct: 20  FLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRS 79

Query: 132 M-PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
           + P  +V  W+++IR     GL  +AL    EMR   ++P      S+++  A + D++L
Sbjct: 80  ISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLEL 139

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           G  +H   +    +  L   I  ALIDMYS+  +L  A+ +F  ++    VSW  +ISGY
Sbjct: 140 GCIVHEHAMEMGFESDL--YIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGY 197

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
                  + + ++ +     + P   T+ S+++ CG +  ++ G  +H  I + G    +
Sbjct: 198 CSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDV 257

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
            + N L+ MY K   +R AR +F  M  KD + WN +I  YAQ    + + +LF+ M + 
Sbjct: 258 IIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-ID 316

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
              P+ +++   +  C ++G L++GK++H Y+   G E D +    L+DMYAKCGD+  A
Sbjct: 317 GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAA 376

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF--VDMERSGVKPNGITFIGLLNACS 488
             +F     +D   WN+++ GY   G  +E L  F  + MER   KP+ +TF+ LL+  S
Sbjct: 377 QEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER---KPDSVTFVLLLSIFS 433

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
               + +G+ +   ++   G   ++     ++D+  + G +D+  ++   M    ++I W
Sbjct: 434 QLADINQGRGIHCDVIK-FGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH-DIISW 491

Query: 549 GALLAAS 555
             ++A+S
Sbjct: 492 NTVIASS 498


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 204/593 (34%), Positives = 332/593 (55%), Gaps = 4/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL++ Y  N     AL++Y   R  G   D FT+ ++L AC  ++    G  +HG   
Sbjct: 190 WNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIE 249

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+ GD  + N L+ MY +   L  AR +F +M  +D V+W+TMI GY + G  E +++
Sbjct: 250 KIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVK 309

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M      P  +++ S +       D+ +GK +H  ++ +    +        LIDM
Sbjct: 310 LFMDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGS--GFECDTVACNILIDM 366

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG+L  A+++F+       V+W  +I+GY +     EG+  F  M  E   P  +T 
Sbjct: 367 YAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERK-PDSVTF 425

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           + L+     +  +  G+ +H  +++ GFE  L + N+L+D+Y KC E+     +F  M +
Sbjct: 426 VLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSA 485

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D++ WN VI++          F++   M+   + P+E T++G+L +C+       GK +
Sbjct: 486 HDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEI 545

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H YI K G E +V +  AL++MY+KCG +    ++F     +D+  W A+++ +GM+G G
Sbjct: 546 HGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYGEG 605

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           ++AL  F DME SGV P+ + FI  + ACSH+G+V EG   FD+M     L P++EHY C
Sbjct: 606 KKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYAC 665

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VDLL R+GLL +A E I SMP++P+  +WGALL+A +   N ++ +  + +ILE+   +
Sbjct: 666 VVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDD 725

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            GY VL+SNIYA   +W+ V  VR  MK   +KKEPG S +E+   V+ F  G
Sbjct: 726 TGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTG 778



 Score =  289 bits (740), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 174/575 (30%), Positives = 296/575 (51%), Gaps = 39/575 (6%)

Query: 9   NLEQTRQCHAHIIKTHFKFS----------YTNIINPLTR---------------YNSLV 43
           N  Q R  H+ II +    S          Y  + +P++                +NS++
Sbjct: 34  NTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSII 93

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD 103
            +   N   + AL  Y  MR+   + D FT P+++ +CA++L   LG  +H  A++ G +
Sbjct: 94  RALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFE 153

Query: 104 GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
            D Y+ NALI MYS    L +ARY+F+EM NRD VSW+++I GY   G  E+AL++  + 
Sbjct: 154 SDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKF 213

Query: 164 RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMY 219
           R   + P    M S++     +  V  G A+H  +      EK+G+A    I   L+ MY
Sbjct: 214 RMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVI------EKIGIAGDVIIGNGLLSMY 267

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            K   L  A+++F+++     V+W  MI GY +       V+LF +MI+  V P  ++I 
Sbjct: 268 FKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFV-PDMLSIT 326

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           S I  CG  G LQ+GK++H Y++ +GFE      N L+DMY KC ++ +A+ +FD  K K
Sbjct: 327 STIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCK 386

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           D + WN++I+ Y Q+    +  E F  MK+ + +P+ VT V LLS+ ++   +  G+ +H
Sbjct: 387 DSVTWNSLINGYTQSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIH 445

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
             + K G E ++I+  +L+D+YAKCG+++   ++FS     DI  WN ++A         
Sbjct: 446 CDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCT 505

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
                  +M   G+ P+  T +G+L  CS   +  +GK +   +    G    +     +
Sbjct: 506 VGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHGYIFKS-GFESNVPIGNAL 564

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +++  + G L+   ++ K M  + +++ W AL++A
Sbjct: 565 IEMYSKCGSLENCIKVFKYMKEK-DVVTWTALISA 598



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 246/496 (49%), Gaps = 11/496 (2%)

Query: 72  FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE 131
           F   ++LK  +    T   + +H   I +GL      S  LI  Y++    +S+  +F  
Sbjct: 20  FLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRS 79

Query: 132 M-PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
           + P  +V  W+++IR     GL  +AL    EMR   ++P      S+++  A + D++L
Sbjct: 80  ISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLEL 139

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           G  +H   +    +  L   I  ALIDMYS+  +L  A+ +F  ++    VSW  +ISGY
Sbjct: 140 GCIVHEHAMEMGFESDL--YIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGY 197

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
                  + + ++ +     + P   T+ S+++ CG +  ++ G  +H  I + G    +
Sbjct: 198 CSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDV 257

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
            + N L+ MY K   +R AR +F  M  KD + WN +I  YAQ    + + +LF+ M + 
Sbjct: 258 IIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-ID 316

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
              P+ +++   +  C ++G L++GK++H Y+   G E D +    L+DMYAKCGD+  A
Sbjct: 317 GFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAA 376

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF--VDMERSGVKPNGITFIGLLNACS 488
             +F     +D   WN+++ GY   G  +E L  F  + MER   KP+ +TF+ LL+  S
Sbjct: 377 QEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMER---KPDSVTFVLLLSIFS 433

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
               + +G+ +   ++   G   ++     ++D+  + G +D+  ++   M    ++I W
Sbjct: 434 QLADINQGRGIHCDVIK-FGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH-DIISW 491

Query: 549 GALLAASKLHKNPSMG 564
             ++A+S    + ++G
Sbjct: 492 NTVIASSVHFDDCTVG 507


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 216/584 (36%), Positives = 326/584 (55%), Gaps = 50/584 (8%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMPNR---DVVSWSTMIR 145
           K+IH   IK GL+   +V + LI     S  G L  A  LF+E       +V  W+++IR
Sbjct: 45  KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVFIWNSLIR 104

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAM------------------------------ 175
           GY     P  +L +   M +  ++P+                                  
Sbjct: 105 GYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHF 164

Query: 176 -----ISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA-TALIDMYSKCGNLAYAK 229
                 S++ ++A V ++D  + +            L  A++ TALI  Y   G L  A+
Sbjct: 165 NPHVHTSVIHMYASVGEMDFARLVF-------DKSSLRDAVSFTALITGYVSQGCLDDAR 217

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           +LF+ +    VVSW  MISGY++     E +  F EM E NV P++ T++ ++  CG   
Sbjct: 218 RLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTR 277

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
             +LGKW+ +++  NGF  +L + NAL+DMY KC E   AR LFDG++ KDV+ WN +I 
Sbjct: 278 SGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIG 337

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLE 408
            Y+     ++A  LF  M  S V+PN+VT +G+L  C   GAL++GKW+H YI+K     
Sbjct: 338 GYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNS 397

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            +  L T+L+DMYAKCG +  A R+F     R++  WNAM++G+ MHG  E AL  F +M
Sbjct: 398 SNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEM 457

Query: 469 ERSGV-KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
              G+ +P+ ITF+G+L+AC+ AGLV  G   F  M+   G+ PK++HYGCM+DLL RA 
Sbjct: 458 VNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAE 517

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSN 587
             +EA  ++K+M + P+  +WG+LL+A K H     GE  A ++ ++EP+N G  VL+SN
Sbjct: 518 KFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSN 577

Query: 588 IYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           IYA A RW+DVA +R  + +  +KK PG +S+E++G VH+F+ G
Sbjct: 578 IYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVG 621



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 157/504 (31%), Positives = 255/504 (50%), Gaps = 80/504 (15%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL+  Y  ++ P S+L++++ M   G + ++ T P + K+C +   TH GK++H  A+
Sbjct: 99  WNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHAL 158

Query: 99  KNGLDGDAYVSNALIQMYSECGS-------------------------------LVSARY 127
           K  L  + +V  ++I MY+  G                                L  AR 
Sbjct: 159 KLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARR 218

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           LFDE+P +DVVSW+ MI GY + G  EEA+    EM+  ++ P++  M+ ++S       
Sbjct: 219 LFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRS 278

Query: 188 VDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
            +LGK I + V    +D   G  + +  ALIDMY KCG    A++LF+ + +  V+SW  
Sbjct: 279 GELGKWIGSWV----RDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNT 334

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI---L 302
           MI GY   +   E + LF  M+  NV P+++T L ++  C  +G L LGKW+HAYI   L
Sbjct: 335 MIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNL 394

Query: 303 RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
           RN    SL    +L+DMY KC  I +A  +F  M S+++  WNA++S +A     ++A  
Sbjct: 395 RNSSNASL--WTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALA 452

Query: 363 LFIHMKVSK--VRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVD 419
           LF  M V+K   RP+++T VG+LS CT+AG +++G ++  + I+  G+   +     ++D
Sbjct: 453 LFSEM-VNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMID 511

Query: 420 MYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGIT 479
           + A+                                   EEA I   +ME   ++P+G  
Sbjct: 512 LLARAEKF-------------------------------EEAEILMKNME---MEPDGAI 537

Query: 480 FIGLLNACSHAGLVTEGKSVFDKM 503
           +  LL+AC   G V  G+ V +++
Sbjct: 538 WGSLLSACKAHGRVEFGEYVAERL 561



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 193/414 (46%), Gaps = 35/414 (8%)

Query: 179 VSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
           ++L     +++  K IH+ +++   +  + V          S  G+L+YA  LF    Q+
Sbjct: 32  LNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQH 91

Query: 239 ---SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
              +V  W  +I GY   +     + LF+ M+   V P+  T   L   C        GK
Sbjct: 92  HKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGK 151

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCRE------------------------------ 325
            LHA+ L+    F+  +  +++ MY    E                              
Sbjct: 152 QLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQG 211

Query: 326 -IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            +  AR LFD +  KDV+ WNA+IS Y Q+   ++A   F  M+ + V PN+ TMV +LS
Sbjct: 212 CLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLS 271

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
            C    + E+GKW+ +++   G   ++ L  AL+DMY KCG+ + A  LF     +D+  
Sbjct: 272 ACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVIS 331

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           WN M+ GY      EEAL  F  M RS VKPN +TF+G+L+AC+  G +  GK V   + 
Sbjct: 332 WNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYID 391

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             L        +  ++D+  + G ++ A  + +SM  R N+  W A+L+   +H
Sbjct: 392 KNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSR-NLASWNAMLSGFAMH 444



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 191/368 (51%), Gaps = 10/368 (2%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +N++++ Y+++ +   A+  +  M++     +  T+  +L AC       LGK 
Sbjct: 225 VKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKW 284

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           I  +   NG   +  ++NALI MY +CG    AR LFD +  +DV+SW+TMI GY    L
Sbjct: 285 IGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSL 344

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            EEAL +   M   +++P++V  + ++   A +  +DLGK +HA + +N ++     ++ 
Sbjct: 345 YEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSS-NASLW 403

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T+LIDMY+KCG +  A+++F  ++  ++ SW  M+SG+         + LF+EM+ + +F
Sbjct: 404 TSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLF 463

Query: 273 -PSEITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
            P +IT + ++  C   G + LG ++  + I   G    L     ++D+  +  +   A 
Sbjct: 464 RPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAE 523

Query: 331 TLFDGMK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
            L   M+   D  IW +++SA  +AH     F  ++  ++ ++ P       LLS    A
Sbjct: 524 ILMKNMEMEPDGAIWGSLLSA-CKAHG-RVEFGEYVAERLFQLEPENAGAFVLLS-NIYA 580

Query: 390 GALEMGKW 397
           GA   G+W
Sbjct: 581 GA---GRW 585


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/573 (36%), Positives = 322/573 (56%), Gaps = 34/573 (5%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQ---MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           IH   IK GL    Y  + LI+   +      L  A  +F+ +   +++ W+TM RG+  
Sbjct: 6   IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
              P  AL +   M  + + P+      ++   A       G+ IH  V++   D  L V
Sbjct: 66  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 125

Query: 210 AIA-----------------------------TALIDMYSKCGNLAYAKQLFNRLNQNSV 240
             +                             TALI  Y+  G +A A+++F+ +    V
Sbjct: 126 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 185

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           VSW  MISGY       E + LF EM++ NV P E T++S++  C     ++LG+ +H++
Sbjct: 186 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 245

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           I  +GF  +L + NAL+D+Y KC E+ +A  LF+G+  KDV+ WN +I  Y   +   +A
Sbjct: 246 IDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 305

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK--QGLEVDVILKTALV 418
             LF  M  S   PN+VTM+ +L  C   GA+E+G+W+H YI K  +G+      +T+L+
Sbjct: 306 LLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLI 365

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           DMYAKCGD+  A ++F   + R +  WNAM+ G+ MHG    A   F  M ++ ++P+ I
Sbjct: 366 DMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDI 425

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           TF+GLL+ACSH+G++  G+ +F  M     + PK+EHYGCM+DLLG +GL  EA EMI +
Sbjct: 426 TFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINT 485

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDV 598
           M + P+ ++W +LL A K+H N  +GE  A  +++IEP+N G  VL+SNIYA A RWN+V
Sbjct: 486 MEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEV 545

Query: 599 AGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           A +R ++ +  +KK PG SS+E++ +VH+FI G
Sbjct: 546 AKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 578



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 157/501 (31%), Positives = 259/501 (51%), Gaps = 72/501 (14%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++   +  ++ P SAL +Y  M   G   + +T P +LK+CA+      G++IHG  +
Sbjct: 56  WNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVL 115

Query: 99  KNGLDGDAYVSNALIQMYSECGSL-------------------------------VSARY 127
           K G D D YV  +LI MY + G L                                SA+ 
Sbjct: 116 KLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQK 175

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           +FDE+P +DVVSW+ MI GY   G  +EALE+ +EM   ++RP E  M+S+VS  A  A 
Sbjct: 176 MFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSAS 235

Query: 188 VDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           ++LG+ +H+ +     D   G  + I  ALID+Y KCG +  A  LF  L+   V+SW  
Sbjct: 236 IELGRQVHSWI----DDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNT 291

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR-- 303
           +I GY   N   E + LF EM+     P+++T+LS++  C  +G +++G+W+H YI +  
Sbjct: 292 LIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRL 351

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
            G   + +   +L+DMY KC +I +A+ +FD + ++ +  WNA+I  +A     + AF++
Sbjct: 352 KGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDI 411

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F  M+ +++ P+++T VGLLS C+ +G L++G+  H +   + ++ D  + T  ++ Y  
Sbjct: 412 FSRMRKNEIEPDDITFVGLLSACSHSGMLDLGR--HIF---RSMKEDYKI-TPKLEHYGC 465

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
             D+ G   LF EA                      E +I  ++ME     P+G+ +  L
Sbjct: 466 MIDLLGHSGLFKEA----------------------EEMINTMEME-----PDGVIWCSL 498

Query: 484 LNACSHAGLVTEGKSVFDKMV 504
           L AC   G V  G+S    ++
Sbjct: 499 LKACKMHGNVELGESYAQNLI 519



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 169/324 (52%), Gaps = 10/324 (3%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I  +  +N++++ Y +      AL ++  M K     D  T+ +++ ACAQ     LG++
Sbjct: 182 IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQ 241

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H +   +G   +  + NALI +Y +CG + +A  LF+ +  +DV+SW+T+I GY    L
Sbjct: 242 VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 301

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            +EAL + +EM      P++V M+S++   A +  +++G+ IH  + +  K      +  
Sbjct: 302 YKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR 361

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T+LIDMY+KCG++  A+Q+F+ +   S+ SW  MI G+      N    +F+ M +  + 
Sbjct: 362 TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE 421

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE-----FSLAMANALVDMYGKCREIR 327
           P +IT + L+  C   G L LG+    +I R+  E       L     ++D+ G     +
Sbjct: 422 PDDITFVGLLSACSHSGMLDLGR----HIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFK 477

Query: 328 SARTLFDGMK-SKDVMIWNAVISA 350
            A  + + M+   D +IW +++ A
Sbjct: 478 EAEEMINTMEMEPDGVIWCSLLKA 501


>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Vitis vinifera]
          Length = 724

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 214/589 (36%), Positives = 339/589 (57%), Gaps = 14/589 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+  Y +N     AL ++  M + G      T+  ++ +C +  +   GK IHGF I
Sbjct: 122 WNALICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGI 181

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+GLD D  V NAL  MY++C  L +A  LF+E+  +  VSW+TMI  Y + GL +EA+ 
Sbjct: 182 KSGLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAML 241

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V ++M+   +   EV  ++++SL +  A +D   + H  V++         ++ T+L+  
Sbjct: 242 VFKQMQKERV---EVNYVTIISLLSANAHLD---STHCYVIKT--GFATDASVITSLVCS 293

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+ CGN+  A  L+N + Q ++VS T MISGY     +   V  F +M++  + P  + +
Sbjct: 294 YAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAM 353

Query: 279 LSLI---IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +S++    +  F+G    G  +HAY L+ G      + N L+ MY K  +I +  +LF  
Sbjct: 354 VSILHGFTDPTFIGS---GLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSE 410

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M  K ++ WN+VISA  Q      A ELF  M++    P+ +T+  LL+ C+E G L+ G
Sbjct: 411 MGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFG 470

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + LH Y+ +  L+++  L+TALVDMY KCG +  A R+F       +  WN M++GYG+ 
Sbjct: 471 ERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLS 530

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G    AL  + +M+  G+KP+ ITF+G+L+AC+H GLV EGK  F  M    G++P ++H
Sbjct: 531 GHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMREDFGMIPGLQH 590

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
             CMVDLL RAG L+EA   +K+M + P+  +WGALL +  +H+   +GE  A ++L ++
Sbjct: 591 NACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLTSCCIHQELKLGECLAKRLLLLD 650

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
             + G  VLMSN+YA   RW+DVA VR++MK+       G S +EV+ L
Sbjct: 651 YYSGGLYVLMSNLYASKGRWDDVARVRKMMKDTGGDGSSGISLIEVSSL 699



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/481 (28%), Positives = 241/481 (50%), Gaps = 14/481 (2%)

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G +   Y++ A +  Y + G +  A++LF+EMP RDVVSW+ +I GY R G   +ALE
Sbjct: 81  KSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALE 140

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V  +M      P +  ++ +V        +  GKAIH   +++  D  L   +  AL  M
Sbjct: 141 VFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLD--LDCRVKNALTSM 198

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KC +L  A+ LF  + + + VSW  MI  Y +    +E + +F +M +E V  + +TI
Sbjct: 199 YAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTI 258

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +SL+     +         H Y+++ GF    ++  +LV  Y  C  I SA  L++ M  
Sbjct: 259 ISLLSANAHLDS------THCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQ 312

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           ++++   A+IS YA+   +    E F  M   K++P+ V MV +L   T+   +  G  +
Sbjct: 313 RNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGI 372

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H Y  K GL  D ++   L+ MY+K GD+   + LFSE   + +  WN++++     G  
Sbjct: 373 HAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRT 432

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVPKIEHYG 517
            +A+  F  M   G  P+ IT   LL  CS  G +  G+ + + ++ + L +   +E   
Sbjct: 433 SDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLET-- 490

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL--HKNPSMGEIAATQILEIE 575
            +VD+  + G L+ A  + KS+   P +  W  +++   L  H++ ++   +  Q   ++
Sbjct: 491 ALVDMYIKCGRLESAERVFKSIK-EPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLK 549

Query: 576 P 576
           P
Sbjct: 550 P 550



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 128/259 (49%), Gaps = 12/259 (4%)

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           +  ++ ++GF   + +  A +D YGK   I  A+ LF+ M  +DV+ WNA+I  Y++   
Sbjct: 75  IQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGY 134

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
              A E+F+ M      P + T+VGL+  C     +  GK +H +  K GL++D  +K A
Sbjct: 135 DYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNA 194

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           L  MYAKC D+  A  LF E   +    WN M+  YG +G  +EA++ F  M++  V+ N
Sbjct: 195 LTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVN 254

Query: 477 GITFIGLLNACSH----------AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRA 526
            +T I LL+A +H           G  T+  SV   +V        IE  G + +L+ + 
Sbjct: 255 YVTIISLLSANAHLDSTHCYVIKTGFATDA-SVITSLVCSYAGCGNIESAGLLYNLMPQR 313

Query: 527 GLLDEAHEMIKSMPLRPNM 545
            L+     MI     + NM
Sbjct: 314 NLVSLT-AMISGYAEKGNM 331



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 154/330 (46%), Gaps = 8/330 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L    ++++ Y +       +  +  M +   + D   + +IL           G  IH 
Sbjct: 315 LVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHA 374

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + +K GL  D  V N LI MYS+ G + +   LF EM  + ++SW+++I    + G   +
Sbjct: 375 YGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSD 434

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+E+  +MR     P  + + S+++  ++V  +  G+ +H  V+RN  D  +   + TAL
Sbjct: 435 AMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLD--MEDFLETAL 492

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY KCG L  A+++F  + +  + +W  MISGY      +  +  ++EM E+ + P  
Sbjct: 493 VDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDR 552

Query: 276 ITILSLIIECGFVGGLQLGK-WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           IT L ++  C   G +  GK +  +     G    L     +VD+  +   +  A     
Sbjct: 553 ITFLGVLSACTHGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVK 612

Query: 335 GMK-SKDVMIWNAVISAYAQAHCIDKAFEL 363
            M+   D  IW A++++     CI +  +L
Sbjct: 613 NMEVEPDSAIWGALLTSC----CIHQELKL 638


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 205/597 (34%), Positives = 330/597 (55%), Gaps = 3/597 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I  + ++N  ++S         A+ ++  MR     ++ F   +++ A A +   H G+ 
Sbjct: 52  IQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGES 111

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IH    K G + D  +SNA + MY +  S+ +    F  M   ++ S + ++ G+     
Sbjct: 112 IHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTET 171

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            ++   ++ ++      P+    IS++   A   D++ GKAIH  V+++  +      + 
Sbjct: 172 CDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPD--SHLW 229

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            +L+++Y+KCG+  YA ++F  + +  VVSWT +I+G++       G+R+F +M+ E   
Sbjct: 230 NSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFV-AEGYGSGLRIFNQMLAEGFN 288

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P+  T +S++  C  +  + LGK +HA I++N  + +  +  ALVDMY K R +  A T+
Sbjct: 289 PNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETI 348

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ +  +D+  W  +++ YAQ    +KA + FI M+   V+PNE T+   LS C+    L
Sbjct: 349 FNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATL 408

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           + G+ LH+   K G   D+ + +ALVDMYAKCG V  A  +F   + RD   WN ++ GY
Sbjct: 409 DSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGY 468

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             HG G +AL  F  M   G  P+ +TFIG+L+ACSH GL+ EGK  F+ +    G+ P 
Sbjct: 469 SQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPT 528

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           IEHY CMVD+LGRAG   E    I+ M L  N+++W  +L A K+H N   GE AA ++ 
Sbjct: 529 IEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLF 588

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           E+EP+     +L+SN++A    W+DV  VR +M    VKKEPG S VEVNG VH F+
Sbjct: 589 ELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFL 645



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 145/472 (30%), Positives = 244/472 (51%), Gaps = 12/472 (2%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFM 62
           I N F+ +    Q     ++  ++F    +I  L   N+L++ +           I   +
Sbjct: 127 ISNAFVTMYMKTQS----VENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQL 182

Query: 63  RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSL 122
              G E + +T  +ILK CA     + GK IHG  IK+G++ D+++ N+L+ +Y++CGS 
Sbjct: 183 LVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSA 242

Query: 123 VSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLF 182
             A  +F E+P RDVVSW+ +I G+   G     L +  +M      P+    IS++   
Sbjct: 243 NYACKVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSC 301

Query: 183 ADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVS 242
           + ++DVDLGK +HA +V+N  D      + TAL+DMY+K   L  A+ +FNRL +  + +
Sbjct: 302 SSLSDVDLGKQVHAQIVKNSLDGN--DFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFA 359

Query: 243 WTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYIL 302
           WTV+++GY +  +  + V+ F +M  E V P+E T+ S +  C  +  L  G+ LH+  +
Sbjct: 360 WTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAI 419

Query: 303 RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
           + G    + +A+ALVDMY KC  +  A  +FDG+ S+D + WN +I  Y+Q     KA +
Sbjct: 420 KAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALK 479

Query: 363 LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK-QGLEVDVILKTALVDMY 421
            F  M      P+EVT +G+LS C+  G +E GK     + K  G+   +     +VD+ 
Sbjct: 480 AFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDIL 539

Query: 422 AKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG---CGEEALIFFVDME 469
            + G  +       E  +  ++ +W  ++    MHG    GE A +   ++E
Sbjct: 540 GRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELE 591



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 231/461 (50%), Gaps = 5/461 (1%)

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           IKNG+  D+++ ++L+ +Y +C SL  AR + +EMP +DV  W+  +   +     +EA+
Sbjct: 16  IKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAV 75

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           ++   MR   IR ++    S++S  A + D   G++IHACV +   +    + I+ A + 
Sbjct: 76  QLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESD--ILISNAFVT 133

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY K  ++    Q F  +   ++ S   ++SG+      ++G R+  +++ E   P+  T
Sbjct: 134 MYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYT 193

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
            +S++  C   G L  GK +H  ++++G      + N+LV++Y KC     A  +F  + 
Sbjct: 194 FISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 253

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +DV+ W A+I+ +  A        +F  M      PN  T + +L  C+    +++GK 
Sbjct: 254 ERDVVSWTALITGFV-AEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQ 312

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H  I K  L+ +  + TALVDMYAK   +  A  +F+  I RD+  W  ++AGY   G 
Sbjct: 313 VHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQ 372

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           GE+A+  F+ M+R GVKPN  T    L+ CS    +  G+ +    +   G    +    
Sbjct: 373 GEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKA-GQSGDMFVAS 431

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            +VD+  + G +++A  +   +  R + + W  ++     H
Sbjct: 432 ALVDMYAKCGCVEDAEVVFDGLVSR-DTVSWNTIICGYSQH 471



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 178/386 (46%), Gaps = 20/386 (5%)

Query: 198 VVRN--CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
           V++N  C D  L     ++L+++Y KC +L  A+Q+   +    V  W   +S       
Sbjct: 15  VIKNGICPDSHLW----SSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYP 70

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
           + E V+LF  M    +  ++    SLI     +G    G+ +HA + + GFE  + ++NA
Sbjct: 71  LQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNA 130

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
            V MY K + + +    F  M  +++   N ++S +      D+   + I + V    PN
Sbjct: 131 FVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPN 190

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
             T + +L  C   G L  GK +H  + K G+  D  L  +LV++YAKCG  N A ++F 
Sbjct: 191 MYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFG 250

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
           E   RD+  W A++ G+   G G   L  F  M   G  PN  TFI +L +CS    V  
Sbjct: 251 EIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDL 309

Query: 496 GKSVFDKMVH----GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
           GK V  ++V     G   V        +VD+  +   L++A E I +  ++ ++  W  +
Sbjct: 310 GKQVHAQIVKNSLDGNDFVGT-----ALVDMYAKNRFLEDA-ETIFNRLIKRDLFAWTVI 363

Query: 552 LAASKLHKNPSMGEIAATQILEIEPQ 577
           +A    +     GE A    ++++ +
Sbjct: 364 VAG---YAQDGQGEKAVKCFIQMQRE 386


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  389 bits (998), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 204/573 (35%), Positives = 327/573 (57%), Gaps = 34/573 (5%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQ---MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           IH   IK GL    Y  + L++   +      L  A  +F+ +   +++ W+TM RG+  
Sbjct: 21  IHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 80

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
              P  A+++   M  + + P+      ++   A +     G+ IH  V++   +  L V
Sbjct: 81  SSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYV 140

Query: 210 AIA-----------------------------TALIDMYSKCGNLAYAKQLFNRLNQNSV 240
             +                             TALI  Y+  G +  A+++F+ +    V
Sbjct: 141 HTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDV 200

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           VSW  +ISGY       E + LF EM++ NV P E T+++++  C   G +QLG+ +H++
Sbjct: 201 VSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSW 260

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           I  +G   +L + NAL+D+Y KC E+ +A  LF G+ +KDV+ WN +I  Y   +   +A
Sbjct: 261 IDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEA 320

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK--QGLEVDVILKTALV 418
             LF  M  S   PN+VTM+ +L  C + GA++ G+W+H YI+K  +G+     L+T+L+
Sbjct: 321 LLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLI 380

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           DMYAKCGD+  A+++F+   +R +   NAM+ G+ MHG    A   F  M ++G++P+ I
Sbjct: 381 DMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDI 440

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           TF+GLL+ACSH+G++  G+ +F  M     + PK+EHYGCM+DLLG  GL  EA EMI +
Sbjct: 441 TFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMINT 500

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDV 598
           M + P+ ++W +LL A K+H N  +GE  A ++++IEP+N G  VL+SNIYA A RWN+V
Sbjct: 501 MTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWNEV 560

Query: 599 AGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           A +R ++ +  +KK PG SS+E++ +VH+FI G
Sbjct: 561 ANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 593



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 151/501 (30%), Positives = 256/501 (51%), Gaps = 72/501 (14%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++   +  ++ P SA+ +Y  M   G   +++T P +LK+CA++ ++  G++IHG  +
Sbjct: 71  WNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVL 130

Query: 99  KNGLDGDAYVSNALIQM-------------------------------YSECGSLVSARY 127
           K G + D YV  +LI M                               Y+  G + SA+ 
Sbjct: 131 KLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQK 190

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           +FDE+P +DVVSW+ +I GY   G  +EAL++ +EM   +++P E  M+++VS  A    
Sbjct: 191 MFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGS 250

Query: 188 VDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           + LG+ +H+ +     D  LG  + I  ALID+YSKCG +  A  LF  L+   V+SW  
Sbjct: 251 IQLGRQVHSWI----DDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNT 306

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR-- 303
           MI GY   N   E + LF EM+     P+++T+LS++  C  +G +  G+W+H YI +  
Sbjct: 307 MIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRI 366

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
            G   + ++  +L+DMY KC +I +A  +F+ M  + +   NA+I  +A     + AF++
Sbjct: 367 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDI 426

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F  M+ + + P+++T VGLLS C+ +G L++G+ +   +  Q  ++     T  ++ Y  
Sbjct: 427 FSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSM-TQNYKI-----TPKLEHYGC 480

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
             D+ G   LF EA                      E +I  + ME     P+G+ +  L
Sbjct: 481 MIDLLGHLGLFKEA----------------------EEMINTMTME-----PDGVIWCSL 513

Query: 484 LNACSHAGLVTEGKSVFDKMV 504
           L AC   G V  G+S   K++
Sbjct: 514 LKACKMHGNVELGESFAQKLI 534



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 169/320 (52%), Gaps = 2/320 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +N++++ Y        AL+++  M K   + D  T+ T++ ACAQ     LG++
Sbjct: 197 VKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQ 256

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H +   +GL  +  + NALI +YS+CG + +A  LF  + N+DV+SW+TMI GY    L
Sbjct: 257 VHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNL 316

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            +EAL + +EM      P++V M+S++   A +  +D G+ IH  + +  K      ++ 
Sbjct: 317 YKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLR 376

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T+LIDMY+KCG++  A Q+FN ++  ++ +   MI G+      N    +F+ M +  + 
Sbjct: 377 TSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIE 436

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSART 331
           P +IT + L+  C   G L LG+ +   + +N      L     ++D+ G     + A  
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEE 496

Query: 332 LFDGMK-SKDVMIWNAVISA 350
           + + M    D +IW +++ A
Sbjct: 497 MINTMTMEPDGVIWCSLLKA 516


>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
 gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
          Length = 844

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 216/600 (36%), Positives = 345/600 (57%), Gaps = 27/600 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYA-FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +N +++ Y +    S  +  ++ FM  +G   D  T P++LKAC  V+    G +IH  A
Sbjct: 53  WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLA 109

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K G   D YV+ +LI +YS   ++ +AR LFDEMP RD+ SW+ MI GY + G  +EAL
Sbjct: 110 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 169

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            +   +R MD     V ++S++S   +  D + G  IH+  +++  + +L          
Sbjct: 170 TLSNGLRAMD----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL---------- 215

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
                  L   +++F+R+    ++SW  +I  Y    +    + LF EM    + P  +T
Sbjct: 216 -------LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLT 268

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           ++SL      +G ++  + +  + LR G F   + + NA+V MY K   + SAR +F+ +
Sbjct: 269 LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWL 328

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELF-IHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
            + DV+ WN +IS YAQ     +A E++ I  +  ++  N+ T V +L  C++AGAL  G
Sbjct: 329 PNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQG 388

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             LH  + K GL +DV + T+L DMY KCG +  A  LF +    +   WN ++A +G H
Sbjct: 389 MKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFH 448

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G GE+A++ F +M   GVKP+ ITF+ LL+ACSH+GLV EG+  F+ M    G+ P ++H
Sbjct: 449 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 508

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           YGCMVD+ GRAG L+ A + IKSM L+P+  +WGALL+A ++H N  +G+IA+  + E+E
Sbjct: 509 YGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE 568

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
           P++ GY+VL+SN+YA A +W  V  +R +     ++K PG+SS+EV+  V  F  G   +
Sbjct: 569 PEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTH 628



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 127/473 (26%), Positives = 227/473 (47%), Gaps = 41/473 (8%)

Query: 124 SARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE-MRFMDIRPSEVAMISMVSLF 182
           S  + FD + NRDV +W+ MI GY R G   E +      M    + P      S++   
Sbjct: 37  SKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 96

Query: 183 ADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
             V D   G  IH      C   K G    V +A +LI +YS+   +  A+ LF+ +   
Sbjct: 97  RTVID---GNKIH------CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR 147

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
            + SW  MISGY +     E + L   +   +     +T++SL+  C   G    G  +H
Sbjct: 148 DMGSWNAMISGYCQSGNAKEALTLSNGLRAMD----SVTVVSLLSACTEAGDFNRGVTIH 203

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
           +Y +++G E  L               +R  + +FD M  +D++ WN++I AY       
Sbjct: 204 SYSIKHGLESEL---------------LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 248

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG--LEVDVILKTA 416
           +A  LF  M++S+++P+ +T++ L S+ ++ G +   + +  +  ++G  LE D+ +  A
Sbjct: 249 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE-DITIGNA 307

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG-VKP 475
           +V MYAK G V+ A  +F+     D+  WN +++GY  +G   EA+  +  ME  G +  
Sbjct: 308 VVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAA 367

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEM 535
           N  T++ +L ACS AG + +G  +  +++   GL   +     + D+ G+ G L++A  +
Sbjct: 368 NQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSL 426

Query: 536 IKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMS 586
              +P R N + W  L+A    H +     +   ++L+  ++P +  +  L+S
Sbjct: 427 FYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 478



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 114/240 (47%), Gaps = 33/240 (13%)

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQA---HCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
           +S    FD ++++DV  WN +IS Y +A     + + F LF  M  S + P+  T   +L
Sbjct: 36  KSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF--MLSSGLTPDYRTFPSVL 93

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
             C     +  G  +H    K G   DV +  +L+ +Y++   V  A  LF E   RD+ 
Sbjct: 94  KACR---TVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMG 150

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKP-NGITFIGLLNACSHAGLVTEGKSVFDK 502
            WNAM++GY   G  +EAL        +G++  + +T + LL+AC+ AG    G ++   
Sbjct: 151 SWNAMISGYCQSGNAKEALTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSY 205

Query: 503 MV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
            + HGL                  + LL +  ++   M +R ++I W +++ A +L++ P
Sbjct: 206 SIKHGL-----------------ESELLRDCQKVFDRMYVR-DLISWNSIIKAYELNEQP 247


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/584 (35%), Positives = 321/584 (54%), Gaps = 13/584 (2%)

Query: 55  ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
               +  M  +G   D F    I+++C  +    LGK +H   +  G     +VS +L+ 
Sbjct: 205 GFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLN 264

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           MY++ GS+  + ++F+ M   + VSW+ MI G    GL  EA ++   M+     P+   
Sbjct: 265 MYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYT 324

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQ 230
           ++S+      + DV++GK      V+NC  E LG    V + TALIDMYSKCG+L  A+ 
Sbjct: 325 LVSVSKAVGKLVDVNMGKE-----VQNCASE-LGIEGNVLVGTALIDMYSKCGSLHDARS 378

Query: 231 LF--NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
           +F  N +N      W  MISGY +     E + L+ +M +  +     T  S+       
Sbjct: 379 VFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAAS 438

Query: 289 GGLQLGKWLHAYILRNGFEF-SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
             LQ G+ +H  +L+ G +   +++ NA+ D Y KC  +   R +FD M+ +D++ W  +
Sbjct: 439 KSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTL 498

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           ++AY+Q+   ++A   F  M+     PN+ T   +L  C     LE G+ +H  + K GL
Sbjct: 499 VTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGL 558

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
           + +  +++AL+DMYAKCG +  A ++F +    DI  W A+++GY  HG  E+AL  F  
Sbjct: 559 DTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRR 618

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           ME SG+K N +T + +L ACSH G+V EG   F +M  G G+VP++EHY C++DLLGR G
Sbjct: 619 MELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVG 678

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSN 587
            LD+A E I+ MP+ PN +VW  LL   ++H N  +GEIAA +IL I P+     VL+SN
Sbjct: 679 RLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSN 738

Query: 588 IYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            Y     + D   +R VMK+  VKKEPG+S + V G VHKF  G
Sbjct: 739 TYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSG 782



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 248/479 (51%), Gaps = 29/479 (6%)

Query: 6   GFLNLEQTRQCHAHIIKTHFK---FSYTNIINPLTRYNSLVTSY------IKNNK----- 51
           G  +LE  +  HA I+   F    F  T+++N   +  S+  SY       ++N+     
Sbjct: 233 GLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNA 292

Query: 52  -----PSSALNIYAF----MRKNGSEVDN-FTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
                 S+ L++ AF      KNG+   N +T+ ++ KA  +++  ++GKE+   A + G
Sbjct: 293 MISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELG 352

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFD-EMPNRDV-VSWSTMIRGYHRGGLPEEALEV 159
           ++G+  V  ALI MYS+CGSL  AR +FD    N  V   W+ MI GY + G  +EALE+
Sbjct: 353 IEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALEL 412

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
             +M    I        S+ +  A    +  G+ +H  V++ C  + + V++  A+ D Y
Sbjct: 413 YVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLK-CGLDLMVVSVNNAIADAY 471

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
           SKCG L   +++F+R+ +  +VSWT +++ Y + +   E +  F  M EE   P++ T  
Sbjct: 472 SKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFS 531

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           S++I C  +  L+ G+ +H  + + G +    + +AL+DMY KC  I  A  +FD + + 
Sbjct: 532 SVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNP 591

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           D++ W A+IS YAQ   ++ A +LF  M++S ++ N VT++ +L  C+  G +E G +  
Sbjct: 592 DIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYF 651

Query: 400 TYIEK-QGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
             +E   G+  ++     ++D+  + G ++ A     +  +  +  +W  ++ G  +HG
Sbjct: 652 QQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHG 710



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 244/495 (49%), Gaps = 25/495 (5%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGL-DGDAYV-SNALIQMYSECGSLVSARYLFDEMPN 134
           +L+ CA+       K +HG  +K+   D D  V  N    +YS+C    +A  +FDEMP 
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           R+V SW+ MI G    GL  +  +   EM    I P + A  +++     +  ++LGK +
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 243

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
           HA +V   +     + ++T+L++MY+K G++  +  +FN + +++ VSW  MISG     
Sbjct: 244 HAQIVM--RGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNG 301

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
              E   LF  M      P+  T++S+    G +  + +GK +       G E ++ +  
Sbjct: 302 LHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGT 361

Query: 315 ALVDMYGKCREIRSARTLFD------GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
           AL+DMY KC  +  AR++FD      G+ +     WNA+IS Y+Q+ C  +A EL++ M 
Sbjct: 362 ALIDMYSKCGSLHDARSVFDTNFINCGVNTP----WNAMISGYSQSGCSQEALELYVQMC 417

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI-LKTALVDMYAKCGDV 427
            + +  +  T   + +    + +L+ G+ +H  + K GL++ V+ +  A+ D Y+KCG +
Sbjct: 418 QNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFL 477

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
               ++F     RDI  W  ++  Y     GEEAL  F  M   G  PN  TF  +L +C
Sbjct: 478 EDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISC 537

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC----MVDLLGRAGLLDEAHEMIKSMPLRP 543
           +    +  G+      VHGL     ++   C    ++D+  + G + EA ++   +   P
Sbjct: 538 ASLCFLEYGRQ-----VHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKIS-NP 591

Query: 544 NMIVWGALLAASKLH 558
           +++ W A+++    H
Sbjct: 592 DIVSWTAIISGYAQH 606



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 206/418 (49%), Gaps = 22/418 (5%)

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
           +I ++   A+   +   KA+H  V+++  ++K  + +      +YSKC     A  +F+ 
Sbjct: 121 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 180

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           + Q +V SWTVMI G        +G + F EM+   + P +    ++I  C  +  L+LG
Sbjct: 181 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG 240

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
           K +HA I+  GF   + ++ +L++MY K   I  +  +F+ M   + + WNA+IS     
Sbjct: 241 KMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSN 300

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
               +AF+LF+ MK     PN  T+V +     +   + MGK +     + G+E +V++ 
Sbjct: 301 GLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVG 360

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDIC----MWNAMMAGYGMHGCGEEALIFFVDMER 470
           TAL+DMY+KCG ++ A  +F        C     WNAM++GY   GC +EAL  +V M +
Sbjct: 361 TALIDMYSKCGSLHDARSVFDTNFIN--CGVNTPWNAMISGYSQSGCSQEALELYVQMCQ 418

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSV-FDKMVHGLGLVPKIEHY-----GCMVDLLG 524
           +G+  +  T+  + NA      +   KS+ F ++VHG+ L   ++         + D   
Sbjct: 419 NGITSDLYTYCSVFNA------IAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYS 472

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYN 582
           + G L++  ++   M  R +++ W  L+ A   +   S+GE A      +  + +  N
Sbjct: 473 KCGFLEDVRKVFDRMEER-DIVSWTTLVTA---YSQSSLGEEALATFCLMREEGFAPN 526


>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
          Length = 599

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/551 (37%), Positives = 319/551 (57%), Gaps = 21/551 (3%)

Query: 98  IKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +  GL  D + S+ LI     SE   L     +     N +  SW+  IRG+     P E
Sbjct: 2   VLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTRNPNTFSWNVAIRGFLDSENPRE 61

Query: 156 ALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           A+ + + +   D  +P       +    A ++ + +G  I   V+    D    + ++ A
Sbjct: 62  AVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSD--IFVSNA 119

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           +I +   CG+L  A+++F++     +VSW  MI+GY+R     E +  + EM  E + P 
Sbjct: 120 VIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPD 179

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           E+T++ ++  C  +  L LG+  H YI  NG + ++ +ANAL+DMY KC  + SAR LFD
Sbjct: 180 EVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFD 239

Query: 335 GMKSK----------------DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
            M +K                DV+ WNA+I  Y  A+   +A  LF  M+   + P+EVT
Sbjct: 240 SMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVT 299

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
           MV  LS C++ GAL++G W+H YIEK  L ++V L TAL+DMYAKCG +  A ++F E  
Sbjct: 300 MVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELP 359

Query: 439 YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKS 498
            R+   W A+++G  +HG    A+ +F +M  + V P+ +TF+GLL+AC H GLV EG+ 
Sbjct: 360 GRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRK 419

Query: 499 VFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            F +M     L PK++HY CMVDLLGRAGLL+EA E+IKSMP+  + +VWGAL  A ++H
Sbjct: 420 YFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIH 479

Query: 559 KNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSS 618
            N  MGE AA+++L+++P + G  VL++N+Y  A  W +    R++M++  V+K PG SS
Sbjct: 480 GNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCSS 539

Query: 619 VEVNGLVHKFI 629
           +EVNG+V++FI
Sbjct: 540 IEVNGIVYEFI 550



 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 159/446 (35%), Positives = 238/446 (53%), Gaps = 22/446 (4%)

Query: 31  NIINPLT-RYNSLVTSYIKNNKPSSALNIYA-FMRKNGSEVDNFTIPTILKACAQVLMTH 88
           N  NP T  +N  +  ++ +  P  A+ +Y   ++ +G++ DN+T P + KACA++ +  
Sbjct: 37  NTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIR 96

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           +G EI G  +  G D D +VSNA+I +   CG L  AR +FD+   RD+VSW++MI GY 
Sbjct: 97  MGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYV 156

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           R G   EAL   REM+   I+P EV MI +VS  A + D+DLG+  H  +  N    KL 
Sbjct: 157 RRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEEN--GLKLT 214

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV----------------MISGYIR 252
           V +A AL+DMY KCGNL  A++LF+ +   ++VSWT                 MI GY+ 
Sbjct: 215 VPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMLFDEMPDKDVVPWNAMIGGYVH 274

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
            N   E + LF EM   N+ P E+T++S +  C  +G L +G W+H YI ++    ++A+
Sbjct: 275 ANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVAL 334

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
             AL+DMY KC +I  A  +F  +  ++ + W A+IS  A       A   F  M  + V
Sbjct: 335 GTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSV 394

Query: 373 RPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
            P+EVT +GLLS C   G +E G K+      K  L   +   + +VD+  + G +  A 
Sbjct: 395 MPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAE 454

Query: 432 RLF-SEAIYRDICMWNAMMAGYGMHG 456
            L  S  I  D  +W A+     +HG
Sbjct: 455 ELIKSMPIEADAVVWGALFFACRIHG 480


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 211/581 (36%), Positives = 333/581 (57%), Gaps = 42/581 (7%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQ---MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
           + IH   IK GL    Y  + L++   +         A  +FD +   +++ W+TM RG+
Sbjct: 5   RXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGH 64

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
                P  AL++   M  + + P       ++   A       G+ IH  V++   D  L
Sbjct: 65  ALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFD--L 122

Query: 208 GVAIATALIDMYSKCGNLA-------------------------------YAKQLFNRLN 236
            + + T+LI MY++ G L                                 A++LF+ + 
Sbjct: 123 DIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIP 182

Query: 237 QNSVVSWTVMISGYIRCNEINEGVRLFAEMIE-ENVFPSEITILSLIIECGFVGGLQLGK 295
              VVSW  MISGY+      E + LF EM+   NV P E T+++++  C     ++LG+
Sbjct: 183 GKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGR 242

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
            +H++I  +GF  +L + NAL+D+Y K  E+ +A  LFDG+ +KDV+ WN +I  Y   +
Sbjct: 243 HVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHMN 302

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ--GLEVDVI- 412
              +A  LF  M  S   PN+VTM+ +L  C   GA+++G+W+H YI K+  G+  +V  
Sbjct: 303 LYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSS 362

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIY-RDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
           L+T+L+DMYAKCGD++ A ++F  ++  R +  WNAM++G+ MHG    A   F  M  +
Sbjct: 363 LQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMN 422

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
           G++P+ ITF+GLL+ACSH+G++  G+++F  M  G  + PK+EHYGCM+DLLG +GL  E
Sbjct: 423 GIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKE 482

Query: 532 AHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAV 591
           A EMI +MP+ P+ ++W +LL A K+H N  +GE  A ++++IEP N G  VL+SNIYA 
Sbjct: 483 AEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAA 542

Query: 592 ANRWNDVAGVRRVMKEIRVKKE-PGFSSVEVNGLVHKFIRG 631
           A RWN+VA +R ++ +  +KK+ PG SS+E++ +VH+FI G
Sbjct: 543 AGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVVHEFIIG 583



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 166/528 (31%), Positives = 269/528 (50%), Gaps = 78/528 (14%)

Query: 20  IIKTHFK-FSYT-----NIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNF 72
           ++  HF  F Y       I  P L  +N++   +  ++ P SAL +Y  M   G   D++
Sbjct: 31  VVSPHFDGFPYAISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSY 90

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSAR------ 126
           T P +LK+CA+  +   G++IHG  +K G D D YV  +LI MY++ G L  AR      
Sbjct: 91  TFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDIS 150

Query: 127 -------------------------YLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
                                     LFDE+P +DVVSW+ MI GY   G  +EALE+ +
Sbjct: 151 SHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFK 210

Query: 162 EMRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
           EM  M ++RP E  M+++VS  A    ++LG+ +H+ +  N       + I  ALID+YS
Sbjct: 211 EMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWI--NDHGFASNLKIVNALIDLYS 268

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           K G +  A +LF+ L    V+SW  +I GY   N   E + LF EM+     P+++T+LS
Sbjct: 269 KFGEVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 328

Query: 281 LIIECGFVGGLQLGKWLHAYI---LRNGFEFSLAMANALVDMYGKCREIRSARTLFD-GM 336
           ++  C  +G + +G+W+H YI   L+       ++  +L+DMY KC +I +A+ +FD  M
Sbjct: 329 ILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSM 388

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
            ++ +  WNA+IS +A     + AF++F  M+++ + P+++T VGLLS C+ +G L++G+
Sbjct: 389 SNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGR 448

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +   + + G E+     T  ++ Y    D+ G   LF EA                   
Sbjct: 449 NIFRSMTR-GYEI-----TPKLEHYGCMIDLLGHSGLFKEA------------------- 483

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
              E +I  + ME     P+G+ +  LL AC   G +  G+S   K++
Sbjct: 484 ---EEMINTMPME-----PDGVIWCSLLKACKIHGNLELGESFAKKLI 523


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/584 (35%), Positives = 321/584 (54%), Gaps = 13/584 (2%)

Query: 55  ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
               +  M  +G   D F    I+++C  +    LGK +H   +  G     +VS +L+ 
Sbjct: 151 GFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLN 210

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           MY++ GS+  + ++F+ M   + VSW+ MI G    GL  EA ++   M+     P+   
Sbjct: 211 MYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYT 270

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQ 230
           ++S+      + DV++GK      V+NC  E LG    V + TALIDMYSKCG+L  A+ 
Sbjct: 271 LVSVSKAVGKLVDVNMGKE-----VQNCASE-LGIEGNVLVGTALIDMYSKCGSLHDARS 324

Query: 231 LF--NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
           +F  N +N      W  MISGY +     E + L+ +M +  +     T  S+       
Sbjct: 325 VFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAAS 384

Query: 289 GGLQLGKWLHAYILRNGFEF-SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
             LQ G+ +H  +L+ G +   +++ NA+ D Y KC  +   R +FD M+ +D++ W  +
Sbjct: 385 KSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKVFDRMEERDIVSWTTL 444

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           ++AY+Q+   ++A   F  M+     PN+ T   +L  C     LE G+ +H  + K GL
Sbjct: 445 VTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGL 504

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
           + +  +++AL+DMYAKCG +  A ++F +    DI  W A+++GY  HG  E+AL  F  
Sbjct: 505 DTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRR 564

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           ME SG+K N +T + +L ACSH G+V EG   F +M  G G+VP++EHY C++DLLGR G
Sbjct: 565 MELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVG 624

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSN 587
            LD+A E I+ MP+ PN +VW  LL   ++H N  +GEIAA +IL I P+     VL+SN
Sbjct: 625 RLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPEYSATYVLLSN 684

Query: 588 IYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            Y     + D   +R VMK+  VKKEPG+S + V G VHKF  G
Sbjct: 685 TYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGRVHKFYSG 728



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 248/479 (51%), Gaps = 29/479 (6%)

Query: 6   GFLNLEQTRQCHAHIIKTHFK---FSYTNIINPLTRYNSLVTSY------IKNNK----- 51
           G  +LE  +  HA I+   F    F  T+++N   +  S+  SY       ++N+     
Sbjct: 179 GLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNA 238

Query: 52  -----PSSALNIYAF----MRKNGSEVDN-FTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
                 S+ L++ AF      KNG+   N +T+ ++ KA  +++  ++GKE+   A + G
Sbjct: 239 MISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELG 298

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFD-EMPNRDV-VSWSTMIRGYHRGGLPEEALEV 159
           ++G+  V  ALI MYS+CGSL  AR +FD    N  V   W+ MI GY + G  +EALE+
Sbjct: 299 IEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALEL 358

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
             +M    I        S+ +  A    +  G+ +H  V++ C  + + V++  A+ D Y
Sbjct: 359 YVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLK-CGLDLMVVSVNNAIADAY 417

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
           SKCG L   +++F+R+ +  +VSWT +++ Y + +   E +  F  M EE   P++ T  
Sbjct: 418 SKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFS 477

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           S++I C  +  L+ G+ +H  + + G +    + +AL+DMY KC  I  A  +FD + + 
Sbjct: 478 SVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNP 537

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           D++ W A+IS YAQ   ++ A +LF  M++S ++ N VT++ +L  C+  G +E G +  
Sbjct: 538 DIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYF 597

Query: 400 TYIEK-QGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
             +E   G+  ++     ++D+  + G ++ A     +  +  +  +W  ++ G  +HG
Sbjct: 598 QQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHG 656



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 244/495 (49%), Gaps = 25/495 (5%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGL-DGDAYV-SNALIQMYSECGSLVSARYLFDEMPN 134
           +L+ CA+       K +HG  +K+   D D  V  N    +YS+C    +A  +FDEMP 
Sbjct: 70  VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           R+V SW+ MI G    GL  +  +   EM    I P + A  +++     +  ++LGK +
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 189

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
           HA +V   +     + ++T+L++MY+K G++  +  +FN + +++ VSW  MISG     
Sbjct: 190 HAQIVM--RGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNG 247

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
              E   LF  M      P+  T++S+    G +  + +GK +       G E ++ +  
Sbjct: 248 LHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGT 307

Query: 315 ALVDMYGKCREIRSARTLFD------GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
           AL+DMY KC  +  AR++FD      G+ +     WNA+IS Y+Q+ C  +A EL++ M 
Sbjct: 308 ALIDMYSKCGSLHDARSVFDTNFINCGVNTP----WNAMISGYSQSGCSQEALELYVQMC 363

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI-LKTALVDMYAKCGDV 427
            + +  +  T   + +    + +L+ G+ +H  + K GL++ V+ +  A+ D Y+KCG +
Sbjct: 364 QNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFL 423

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
               ++F     RDI  W  ++  Y     GEEAL  F  M   G  PN  TF  +L +C
Sbjct: 424 EDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISC 483

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC----MVDLLGRAGLLDEAHEMIKSMPLRP 543
           +    +  G+      VHGL     ++   C    ++D+  + G + EA ++   +   P
Sbjct: 484 ASLCFLEYGRQ-----VHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKIS-NP 537

Query: 544 NMIVWGALLAASKLH 558
           +++ W A+++    H
Sbjct: 538 DIVSWTAIISGYAQH 552



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 206/418 (49%), Gaps = 22/418 (5%)

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
           +I ++   A+   +   KA+H  V+++  ++K  + +      +YSKC     A  +F+ 
Sbjct: 67  LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 126

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           + Q +V SWTVMI G        +G + F EM+   + P +    ++I  C  +  L+LG
Sbjct: 127 MPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELG 186

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
           K +HA I+  GF   + ++ +L++MY K   I  +  +F+ M   + + WNA+IS     
Sbjct: 187 KMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSN 246

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
               +AF+LF+ MK     PN  T+V +     +   + MGK +     + G+E +V++ 
Sbjct: 247 GLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVG 306

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDIC----MWNAMMAGYGMHGCGEEALIFFVDMER 470
           TAL+DMY+KCG ++ A  +F        C     WNAM++GY   GC +EAL  +V M +
Sbjct: 307 TALIDMYSKCGSLHDARSVFDTNFIN--CGVNTPWNAMISGYSQSGCSQEALELYVQMCQ 364

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSV-FDKMVHGLGLVPKIEHY-----GCMVDLLG 524
           +G+  +  T+  + NA      +   KS+ F ++VHG+ L   ++         + D   
Sbjct: 365 NGITSDLYTYCSVFNA------IAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYS 418

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYN 582
           + G L++  ++   M  R +++ W  L+ A   +   S+GE A      +  + +  N
Sbjct: 419 KCGFLEDVRKVFDRMEER-DIVSWTTLVTA---YSQSSLGEEALATFCLMREEGFAPN 472


>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
 gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 215/598 (35%), Positives = 344/598 (57%), Gaps = 17/598 (2%)

Query: 37  TRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGF 96
           TR  S +  Y   + P S LN     +K   +     + +++K C      +L K+IH  
Sbjct: 4   TRPTSFLPPY---HLPLSNLNFQT--QKEHHQTLTEKLLSLIKQCKS---KNLLKQIHAQ 55

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE- 155
            + N +    ++ + +I +      L  A  +F+++   ++ +++ M+RG        + 
Sbjct: 56  MLINSIPKPNFLLSKIIDL----KDLAYASLVFNQLTKPNIYAFNVMLRGLATTWKKYDF 111

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            +E+  +++ + ++ +      +     +V  +  GK  H  V +   D      +  +L
Sbjct: 112 CVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGD--EYVNHSL 169

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I MY++CG + +A+++F+ +    +VSW  MISGY +     E + LF EM EE   P E
Sbjct: 170 ITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDE 229

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T++S++  CG +G L LG+W+  ++L    E +  M +AL+DMYGKC ++ SAR +FD 
Sbjct: 230 MTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDS 289

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M +KDV+ WNA+I+ YAQ    ++A  LF  M+ +   P+ VTM+ +LS C+  GAL++G
Sbjct: 290 MPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLG 349

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           KW+ T+  ++GL+ DV + +AL+DMYAKCG ++ A R+F    +++   WNAM++    H
Sbjct: 350 KWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFH 409

Query: 456 GCGEEALIFFVDMERSG--VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
           G  +EAL  F  M +    V+PN ITFIG+L+AC HAGLV EG+ +F+ M    GLVPK+
Sbjct: 410 GQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKV 469

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHY CMVDL  RAGLL EA ++IK MP +P+ IV G+LL A +  +N  +GE      LE
Sbjct: 470 EHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGERVIQLFLE 529

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +E  N G  V+ S IYA   RW+D A +R +M++  V K PG S +++   VH+F  G
Sbjct: 530 MELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSKTPGCSWIDIGAHVHEFHAG 587



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 182/342 (53%), Gaps = 9/342 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NS+++ Y K      A+ ++  MR+ G E D  T+ ++L AC  +    LG+ + G
Sbjct: 194 LVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEG 253

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F ++  ++ ++Y+ +ALI MY +CG L+SAR +FD MPN+DVV+W+ +I GY + G   E
Sbjct: 254 FVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNE 313

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+ +   MR     P  V MI ++S  + +  +DLGK +        K  +  V +A+AL
Sbjct: 314 AIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASE--KGLQHDVYVASAL 371

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN--VFP 273
           IDMY+KCG+L  A ++F  +   + VSW  MIS      +  E + LF  M ++N  V P
Sbjct: 372 IDMYAKCGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQP 431

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYI-LRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           ++IT + ++  C   G +  G+ L   + L  G    +   + +VD+  +   +  A  L
Sbjct: 432 NDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDL 491

Query: 333 FDGMKSK-DVMIWNAVISAYAQAHCID---KAFELFIHMKVS 370
              M  K D ++  +++ A  +    D   +  +LF+ M++S
Sbjct: 492 IKKMPGKPDEIVLGSLLGACQRRRNADVGERVIQLFLEMELS 533


>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
 gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
 gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
          Length = 1027

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/596 (33%), Positives = 342/596 (57%), Gaps = 9/596 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++T +++N  P  A+ ++ +M +   + D FT  +IL AC  +   +LGK++H   I
Sbjct: 394 WNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTI 453

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KN +D   +V+NA + MYS+ G++  A+ LF  +P +D +SW+ +  G  +    EEA+ 
Sbjct: 454 KNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVC 513

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALI 216
           +++ MR   I P +V+  + ++  +++   + GK IH   ++   C +     A+ ++LI
Sbjct: 514 MLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNH----AVGSSLI 569

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           D+YSK G++  ++++F +++ +S+V    +I+G+++ N  +E ++LF +++++ + PS +
Sbjct: 570 DLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSV 629

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN-ALVDMYGKCREIRSARTLFDG 335
           T  S++  C       +GK +H Y L++G  +   +   +L  +Y K + +  A  L   
Sbjct: 630 TFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTE 689

Query: 336 MKS-KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
           M   K++  W A+IS YAQ    D +   F  M+   VR +E T   +L  C++  A   
Sbjct: 690 MPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFAD 749

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYG 453
           GK +H  I K G        +AL+DMY+KCGDV  ++  F E   + DI  WN+M+ G+ 
Sbjct: 750 GKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFA 809

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +G  +EAL+ F  ME   +KP+ +TF+G+L AC+H+GL++EG+  F  M    GL P++
Sbjct: 810 KNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRL 869

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           +HY C +DLLGR G L EA E I  +P RP+ +VW   LAA ++HK+   G+IAA +++E
Sbjct: 870 DHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVE 929

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +EPQ     VL+S+++A    W +    R  M+E  V K PG S + V      F+
Sbjct: 930 LEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFL 985



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 267/520 (51%), Gaps = 13/520 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++++ + ++    + L +Y  MR  G      T  ++L A A +     G+++H  A+
Sbjct: 293 WNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAV 352

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +GLD + +V ++LI +Y++CG    A+ +FD    +++V W+ M+ G+ +  LPEEA+ 
Sbjct: 353 MHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIR 412

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + + M    ++  E   +S++     ++   LGK +H   ++NC D  L VA AT  +DM
Sbjct: 413 MFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANAT--LDM 470

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSK G +  AK LF+ +     +SW  +  G  +  E  E V +   M    + P +++ 
Sbjct: 471 YSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSF 530

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            + I  C  +   + GK +H   ++ G   + A+ ++L+D+Y K  ++ S+R +F  + +
Sbjct: 531 STAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDA 590

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
             ++  NA+I+ + Q +  D+A +LF  +    ++P+ VT   +LS C+ +    +GK +
Sbjct: 591 SSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQV 650

Query: 399 HTYIEKQG-LEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
           H Y  K G L  D +L  +L  +Y K   +  A +L +E   ++++  W A+++GY  +G
Sbjct: 651 HCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNG 710

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
            G+ +L+ F  M    V+ +  TF  +L ACS      +GK      +HGL        Y
Sbjct: 711 YGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKE-----IHGLITKSGFGSY 765

Query: 517 ----GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
                 ++D+  + G +  + E  K +  + +++ W +++
Sbjct: 766 ETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 805



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 223/461 (48%), Gaps = 38/461 (8%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMR-KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +SL++ + ++  P   L  + ++R   G   D F +  +L AC++V +   G+++H   +
Sbjct: 126 SSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVV 185

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G     +   AL+ MY++CG + +AR +FD +   D + WS+MI  YHR G  +EAL 
Sbjct: 186 KSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALA 245

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M  M   P +V +++++S  A                                   
Sbjct: 246 LFSRMDKMGSAPDQVTLVTIISTLA----------------------------------- 270

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
               G L +A  L  ++   S V+W  +ISG+ +       + L+ +M    ++P+  T 
Sbjct: 271 --SSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTF 328

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++     +     G+ +HA  + +G + ++ + ++L+++Y KC     A+ +FD    
Sbjct: 329 ASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCE 388

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K++++WNA+++ + Q    ++A  +F +M    ++ +E T V +L  CT   +  +GK +
Sbjct: 389 KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQV 448

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    K  +++ + +  A +DMY+K G +  A  LFS   Y+D   WNA+  G   +   
Sbjct: 449 HCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEE 508

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           EEA+     M   G+ P+ ++F   +NACS+      GK +
Sbjct: 509 EEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQI 549



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 255/520 (49%), Gaps = 47/520 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           ++S++  Y +      AL +++ M K GS  D  T+ TI                     
Sbjct: 227 WSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTI--------------------- 265

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
                         I   +  G L  A  L  +MP    V+W+ +I G+ + GL    L 
Sbjct: 266 --------------ISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLG 311

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + ++MR   + P+     SM+S  A++     G+ +HA  V +  D    V + ++LI++
Sbjct: 312 LYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN--VFVGSSLINL 369

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG  + AK +F+   + ++V W  M++G+++     E +R+F  M+   +   E T 
Sbjct: 370 YAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTF 429

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +S++  C ++    LGK +H   ++N  + SL +ANA +DMY K   I  A+ LF  +  
Sbjct: 430 VSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPY 489

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WNA+    AQ    ++A  +   M++  + P++V+    ++ C+   A E GK +
Sbjct: 490 KDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQI 549

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    K G+  +  + ++L+D+Y+K GDV  + ++F++     I   NA++AG+  +   
Sbjct: 550 HCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNE 609

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +EA+  F  + + G+KP+ +TF  +L+ CS +       S   K VH   L   + +   
Sbjct: 610 DEAIQLFQQVLKDGLKPSSVTFSSILSGCSGS-----LNSAIGKQVHCYTLKSGVLYDDT 664

Query: 519 M--VDLLG---RAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           +  V L G   ++ +L++A++++  MP   N+  W A+++
Sbjct: 665 LLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIIS 704



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 158/363 (43%), Gaps = 42/363 (11%)

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           +A+H  ++R      L   +  +L+++Y K G + YA        + +  + + ++S + 
Sbjct: 76  RALHGRILRG--GSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHA 133

Query: 252 RCNEINEGVRLFAEM-IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
           R     + +  F  +       P +  +  ++  C  VG L  G+ +H  ++++GF  S+
Sbjct: 134 RSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSV 193

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
               ALVDMY KC ++ +AR +FDG+   D + W+++I+ Y +  C  +A  LF  M   
Sbjct: 194 FCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKM 253

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
              P++VT+V ++S    +G L+                     TAL+        V   
Sbjct: 254 GSAPDQVTLVTIISTLASSGRLDHA-------------------TALLKKMPTPSTV--- 291

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
                         WNA+++G+   G     L  + DM   G+ P   TF  +L+A ++ 
Sbjct: 292 -------------AWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANM 338

Query: 491 GLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
               EG+ +    V HGL     +     +++L  + G   +A  +   +    N+++W 
Sbjct: 339 KAFVEGQQMHAAAVMHGLD--ANVFVGSSLINLYAKCGCPSDAKNVF-DLSCEKNIVMWN 395

Query: 550 ALL 552
           A+L
Sbjct: 396 AML 398



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 1/213 (0%)

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
           Q  + LH  ILR G      + ++LV++Y K   +  A +       +     ++++S +
Sbjct: 73  QTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCH 132

Query: 352 AQAHCIDKAFELFIHMKVSKV-RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
           A++         F +++ +   RP++  +  +LS C+  G L  G+ +H  + K G    
Sbjct: 133 ARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSS 192

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
           V  + ALVDMYAKCGDV  A R+F      D   W++M+A Y   GC +EAL  F  M++
Sbjct: 193 VFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDK 252

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            G  P+ +T + +++  + +G +    ++  KM
Sbjct: 253 MGSAPDQVTLVTIISTLASSGRLDHATALLKKM 285


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 204/570 (35%), Positives = 331/570 (58%), Gaps = 11/570 (1%)

Query: 65  NGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVS 124
           +G   D+F    I  A  +  +    K+IH   +  GL    ++   LI   S  G +  
Sbjct: 16  SGIHSDSFYASLIDSATHKAQL----KQIHARLLVLGLQFSGFLITKLIHASSSFGDITF 71

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           AR +FD++P   +  W+ +IRGY R    ++AL +   M+   + P       ++   + 
Sbjct: 72  ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFN--RLNQNSVVS 242
           ++ + +G+ +HA V R   D    V +   LI +Y+KC  L  A+ +F    L + ++VS
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDAD--VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVS 189

Query: 243 WTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYIL 302
           WT ++S Y +  E  E + +F+ M + +V P  + ++S++     +  L+ G+ +HA ++
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249

Query: 303 RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
           + G E    +  +L  MY KC ++ +A+ LFD MKS ++++WNA+IS YA+     +A +
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 309

Query: 363 LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYA 422
           +F  M    VRP+ +++   +S C + G+LE  + ++ Y+ +     DV + +AL+DM+A
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFA 369

Query: 423 KCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
           KCG V GA  +F   + RD+ +W+AM+ GYG+HG   EA+  +  MER GV PN +TF+G
Sbjct: 370 KCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLG 429

Query: 483 LLNACSHAGLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
           LL AC+H+G+V EG   F+ M  H +   P+ +HY C++DLLGRAG LD+A+E+IK MP+
Sbjct: 430 LLMACNHSGMVREGWWFFNLMADHKIN--PQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 487

Query: 542 RPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGV 601
           +P + VWGALL+A K H++  +GE AA Q+  I+P N G+ V +SN+YA A  W+ VA V
Sbjct: 488 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 547

Query: 602 RRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           R  MKE  + K+ G S VEV G +  F  G
Sbjct: 548 RVRMKEKGLNKDVGCSWVEVRGRLEAFRVG 577



 Score =  261 bits (667), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 141/446 (31%), Positives = 243/446 (54%), Gaps = 18/446 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y +NN    AL +Y+ M+      D+FT P +LKAC+ +    +G+ +H    
Sbjct: 87  WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFD--EMPNRDVVSWSTMIRGYHRGGLPEEA 156
           + G D D +V N LI +Y++C  L SAR +F+   +P R +VSW+ ++  Y + G P EA
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           LE+   MR MD++P  VA++S+++ F  + D+  G++IHA VV      K+G+ I   L+
Sbjct: 207 LEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV------KMGLEIEPDLL 260

Query: 217 ----DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
                MY+KCG +A AK LF+++   +++ W  MISGY +     E + +F EMI ++V 
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR 320

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P  I+I S I  C  VG L+  + ++ Y+ R+ +   + +++AL+DM+ KC  +  AR +
Sbjct: 321 PDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLV 380

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FD    +DV++W+A+I  Y       +A  L+  M+   V PN+VT +GLL  C  +G +
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMV 440

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS-EAIYRDICMWNAMMAG 451
             G W    +    +         ++D+  + G ++ AY +     +   + +W A+++ 
Sbjct: 441 REGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500

Query: 452 YGMH---GCGEEAL--IFFVDMERSG 472
              H     GE A   +F +D   +G
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSNTG 526



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 172/318 (54%), Gaps = 7/318 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA--CAQVLMTHLGKEI 93
           +  + ++V++Y +N +P  AL I++ MRK   + D   + ++L A  C Q L    G+ I
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQ--GRSI 244

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           H   +K GL+ +  +  +L  MY++CG + +A+ LFD+M + +++ W+ MI GY + G  
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            EA+++  EM   D+RP  +++ S +S  A V  ++  ++++  V R+  D +  V I++
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS--DYRDDVFISS 362

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALIDM++KCG++  A+ +F+R     VV W+ MI GY       E + L+  M    V P
Sbjct: 363 ALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHP 422

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +++T L L++ C   G ++ G W    +  +           ++D+ G+   +  A  + 
Sbjct: 423 NDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYEVI 482

Query: 334 DGMKSKD-VMIWNAVISA 350
             M  +  V +W A++SA
Sbjct: 483 KCMPVQPGVTVWGALLSA 500


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/540 (35%), Positives = 326/540 (60%), Gaps = 4/540 (0%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSEC--GSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           +++H   +K     D  ++ A+++  +     ++  A  +F+ +   +  +++ MIRG  
Sbjct: 38  QQVHAHLLKTRRLLDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLA 97

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
               P+ AL + ++M    ++  +    S++   + +  +  G+ +HA ++++    K  
Sbjct: 98  FKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKS--GFKSN 155

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
             +   LI MY+ CG +  A+ +F+ + + S+V+W  M+SGY +    +E V+LF +++E
Sbjct: 156 EFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILE 215

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
             +   ++T++S+++ CG +  L++G+ +  YI+  G   +  +  +L+DMY KC ++ +
Sbjct: 216 LRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDT 275

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           AR LFD M  +DV+ W+A+IS YAQA    +A  LF  M+   V PNEVTMV +L  C  
Sbjct: 276 ARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAM 335

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
            GA E GKW+H YI+K+ +++ V L T L+D YAKCG ++ +  +F E  ++++  W A+
Sbjct: 336 LGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTAL 395

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           + G   +G G+ AL FF  M  + VKPN +TFIG+L+ACSHA LV +G+ +F+ M     
Sbjct: 396 IQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFD 455

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
           + P+IEHYGCMVD+LGRAG L+EA++ I +MP  PN +VW  LLA+ + HKN  M E + 
Sbjct: 456 IEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSL 515

Query: 569 TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
             I  +EP + G  +L+SN YA+  R  D   VR ++KE  +KK PG S +E++G+VH+F
Sbjct: 516 EHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCSLIELDGVVHEF 575



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 236/419 (56%), Gaps = 4/419 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN ++        P +AL ++  M +   + D FT  ++LKAC+++     G+++H   +
Sbjct: 89  YNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALIL 148

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G   + +V N LIQMY+ CG +  AR++FD MP R +V+W++M+ GY + GL +E ++
Sbjct: 149 KSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKNGLWDEVVK 208

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R++  + I   +V MIS++     +A++++G+ I   +V   K  +    + T+LIDM
Sbjct: 209 LFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIV--SKGLRRNNTLTTSLIDM 266

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG +  A++LF+ +++  VV+W+ MISGY + +   E + LF EM + NV+P+E+T+
Sbjct: 267 YAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTM 326

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +S++  C  +G  + GKW+H YI +   + ++ +   L+D Y KC  I  +  +F  M  
Sbjct: 327 VSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSF 386

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K+V  W A+I   A       A E F  M  + V+PN+VT +G+LS C+ A  ++ G+ L
Sbjct: 387 KNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHL 446

Query: 399 HTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY-RDICMWNAMMAGYGMH 455
              + +   +E  +     +VD+  + G +  AY+      +  +  +W  ++A    H
Sbjct: 447 FNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAH 505


>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
          Length = 1037

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/596 (33%), Positives = 342/596 (57%), Gaps = 9/596 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++T +++N  P  A+ ++ +M +   + D FT  +IL AC  +   +LGK++H   I
Sbjct: 404 WNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTI 463

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KN +D   +V+NA + MYS+ G++  A+ LF  +P +D +SW+ +  G  +    EEA+ 
Sbjct: 464 KNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVC 523

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALI 216
           +++ MR   I P +V+  + ++  +++   + GK IH   ++   C +     A+ ++LI
Sbjct: 524 MLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNH----AVGSSLI 579

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           D+YSK G++  ++++F +++ +S+V    +I+G+++ N  +E ++LF +++++ + PS +
Sbjct: 580 DLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSV 639

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN-ALVDMYGKCREIRSARTLFDG 335
           T  S++  C       +GK +H Y L++G  +   +   +L  +Y K + +  A  L   
Sbjct: 640 TFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTE 699

Query: 336 MKS-KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
           M   K++  W A+IS YAQ    D +   F  M+   VR +E T   +L  C++  A   
Sbjct: 700 MPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFAD 759

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYG 453
           GK +H  I K G        +AL+DMY+KCGDV  ++  F E   + DI  WN+M+ G+ 
Sbjct: 760 GKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFA 819

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +G  +EAL+ F  ME   +KP+ +TF+G+L AC+H+GL++EG+  F  M    GL P++
Sbjct: 820 KNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRL 879

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           +HY C +DLLGR G L EA E I  +P RP+ +VW   LAA ++HK+   G+IAA +++E
Sbjct: 880 DHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVE 939

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +EPQ     VL+S+++A    W +    R  M+E  V K PG S + V      F+
Sbjct: 940 LEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFL 995



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 267/520 (51%), Gaps = 13/520 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++++ + ++    + L +Y  MR  G      T  ++L A A +     G+++H  A+
Sbjct: 303 WNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAV 362

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +GLD + +V ++LI +Y++CG    A+ +FD    +++V W+ M+ G+ +  LPEEA+ 
Sbjct: 363 MHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIR 422

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + + M    ++  E   +S++     ++   LGK +H   ++NC D  L VA AT  +DM
Sbjct: 423 MFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANAT--LDM 480

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSK G +  AK LF+ +     +SW  +  G  +  E  E V +   M    + P +++ 
Sbjct: 481 YSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSF 540

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            + I  C  +   + GK +H   ++ G   + A+ ++L+D+Y K  ++ S+R +F  + +
Sbjct: 541 STAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDA 600

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
             ++  NA+I+ + Q +  D+A +LF  +    ++P+ VT   +LS C+ +    +GK +
Sbjct: 601 SSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQV 660

Query: 399 HTYIEKQG-LEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
           H Y  K G L  D +L  +L  +Y K   +  A +L +E   ++++  W A+++GY  +G
Sbjct: 661 HCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNG 720

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
            G+ +L+ F  M    V+ +  TF  +L ACS      +GK      +HGL        Y
Sbjct: 721 YGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKE-----IHGLITKSGFGSY 775

Query: 517 ----GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
                 ++D+  + G +  + E  K +  + +++ W +++
Sbjct: 776 ETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 815



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 223/461 (48%), Gaps = 38/461 (8%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMR-KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +SL++ + ++  P   L  + ++R   G   D F +  +L AC++V +   G+++H   +
Sbjct: 136 SSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVV 195

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G     +   AL+ MY++CG + +AR +FD +   D + WS+MI  YHR G  +EAL 
Sbjct: 196 KSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALA 255

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M  M   P +V +++++S  A                                   
Sbjct: 256 LFSRMDKMGSAPDQVTLVTIISTLA----------------------------------- 280

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
               G L +A  L  ++   S V+W  +ISG+ +       + L+ +M    ++P+  T 
Sbjct: 281 --SSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTF 338

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++     +     G+ +HA  + +G + ++ + ++L+++Y KC     A+ +FD    
Sbjct: 339 ASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCE 398

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K++++WNA+++ + Q    ++A  +F +M    ++ +E T V +L  CT   +  +GK +
Sbjct: 399 KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQV 458

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    K  +++ + +  A +DMY+K G +  A  LFS   Y+D   WNA+  G   +   
Sbjct: 459 HCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEE 518

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           EEA+     M   G+ P+ ++F   +NACS+      GK +
Sbjct: 519 EEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQI 559



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 255/520 (49%), Gaps = 47/520 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           ++S++  Y +      AL +++ M K GS  D  T+ TI                     
Sbjct: 237 WSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTI--------------------- 275

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
                         I   +  G L  A  L  +MP    V+W+ +I G+ + GL    L 
Sbjct: 276 --------------ISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLG 321

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + ++MR   + P+     SM+S  A++     G+ +HA  V +  D    V + ++LI++
Sbjct: 322 LYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN--VFVGSSLINL 379

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG  + AK +F+   + ++V W  M++G+++     E +R+F  M+   +   E T 
Sbjct: 380 YAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTF 439

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +S++  C ++    LGK +H   ++N  + SL +ANA +DMY K   I  A+ LF  +  
Sbjct: 440 VSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPY 499

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WNA+    AQ    ++A  +   M++  + P++V+    ++ C+   A E GK +
Sbjct: 500 KDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQI 559

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    K G+  +  + ++L+D+Y+K GDV  + ++F++     I   NA++AG+  +   
Sbjct: 560 HCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNE 619

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +EA+  F  + + G+KP+ +TF  +L+ CS +       S   K VH   L   + +   
Sbjct: 620 DEAIQLFQQVLKDGLKPSSVTFSSILSGCSGS-----LNSAIGKQVHCYTLKSGVLYDDT 674

Query: 519 M--VDLLG---RAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           +  V L G   ++ +L++A++++  MP   N+  W A+++
Sbjct: 675 LLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIIS 714



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 158/363 (43%), Gaps = 42/363 (11%)

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           +A+H  ++R      L   +  +L+++Y K G + YA        + +  + + ++S + 
Sbjct: 86  RALHGRILRG--GSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHA 143

Query: 252 RCNEINEGVRLFAEM-IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
           R     + +  F  +       P +  +  ++  C  VG L  G+ +H  ++++GF  S+
Sbjct: 144 RSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSV 203

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
               ALVDMY KC ++ +AR +FDG+   D + W+++I+ Y +  C  +A  LF  M   
Sbjct: 204 FCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKM 263

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
              P++VT+V ++S    +G L+                     TAL+        V   
Sbjct: 264 GSAPDQVTLVTIISTLASSGRLDHA-------------------TALLKKMPTPSTV--- 301

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
                         WNA+++G+   G     L  + DM   G+ P   TF  +L+A ++ 
Sbjct: 302 -------------AWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANM 348

Query: 491 GLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
               EG+ +    V HGL     +     +++L  + G   +A  +   +    N+++W 
Sbjct: 349 KAFVEGQQMHAAAVMHGLD--ANVFVGSSLINLYAKCGCPSDAKNVF-DLSCEKNIVMWN 405

Query: 550 ALL 552
           A+L
Sbjct: 406 AML 408



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 1/213 (0%)

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
           Q  + LH  ILR G      + ++LV++Y K   +  A +       +     ++++S +
Sbjct: 83  QTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCH 142

Query: 352 AQAHCIDKAFELFIHMKVSKV-RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
           A++         F +++ +   RP++  +  +LS C+  G L  G+ +H  + K G    
Sbjct: 143 ARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSS 202

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
           V  + ALVDMYAKCGDV  A R+F      D   W++M+A Y   GC +EAL  F  M++
Sbjct: 203 VFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDK 262

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            G  P+ +T + +++  + +G +    ++  KM
Sbjct: 263 MGSAPDQVTLVTIISTLASSGRLDHATALLKKM 295


>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
          Length = 1027

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/596 (33%), Positives = 342/596 (57%), Gaps = 9/596 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++T +++N  P  A+ ++ +M +   + D FT  +IL AC  +   +LGK++H   I
Sbjct: 394 WNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTI 453

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KN +D   +V+NA + MYS+ G++  A+ LF  +P +D +SW+ +  G  +    EEA+ 
Sbjct: 454 KNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVC 513

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALI 216
           +++ MR   I P +V+  + ++  +++   + GK IH   ++   C +     A+ ++LI
Sbjct: 514 MLKRMRLHGITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNH----AVGSSLI 569

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           D+YSK G++  ++++F +++ +S+V    +I+G+++ N  +E ++LF +++++ + PS +
Sbjct: 570 DLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSV 629

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN-ALVDMYGKCREIRSARTLFDG 335
           T  S++  C       +GK +H Y L++G  +   +   +L  +Y K + +  A  L   
Sbjct: 630 TFSSILSGCSGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTE 689

Query: 336 MKS-KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
           M   K++  W A+IS YAQ    D +   F  M+   VR +E T   +L  C++  A   
Sbjct: 690 MPDHKNLFEWTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFAD 749

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYG 453
           GK +H  I K G        +AL+DMY+KCGDV  ++  F E   + DI  WN+M+ G+ 
Sbjct: 750 GKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFA 809

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +G  +EAL+ F  ME   +KP+ +TF+G+L AC+H+GL++EG+  F  M    GL P++
Sbjct: 810 KNGYADEALLLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRL 869

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           +HY C +DLLGR G L EA E I  +P RP+ +VW   LAA ++HK+   G+IAA +++E
Sbjct: 870 DHYACFIDLLGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVE 929

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +EPQ     VL+S+++A    W +    R  M+E  V K PG S + V      F+
Sbjct: 930 LEPQYSSTYVLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFL 985



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 267/520 (51%), Gaps = 13/520 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++++ + ++    + L +Y  MR  G      T  ++L A A +     G+++H  A+
Sbjct: 293 WNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAV 352

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +GLD + +V ++LI +Y++CG    A+ +FD    +++V W+ M+ G+ +  LPEEA+ 
Sbjct: 353 MHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIR 412

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + + M    ++  E   +S++     ++   LGK +H   ++NC D  L VA AT  +DM
Sbjct: 413 MFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANAT--LDM 470

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSK G +  AK LF+ +     +SW  +  G  +  E  E V +   M    + P +++ 
Sbjct: 471 YSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSF 530

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            + I  C  +   + GK +H   ++ G   + A+ ++L+D+Y K  ++ S+R +F  + +
Sbjct: 531 STAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDA 590

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
             ++  NA+I+ + Q +  D+A +LF  +    ++P+ VT   +LS C+ +    +GK +
Sbjct: 591 SSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSGSLNSAIGKQV 650

Query: 399 HTYIEKQG-LEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
           H Y  K G L  D +L  +L  +Y K   +  A +L +E   ++++  W A+++GY  +G
Sbjct: 651 HCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIISGYAQNG 710

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
            G+ +L+ F  M    V+ +  TF  +L ACS      +GK      +HGL        Y
Sbjct: 711 YGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKE-----IHGLITKSGFGSY 765

Query: 517 ----GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
                 ++D+  + G +  + E  K +  + +++ W +++
Sbjct: 766 ETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMI 805



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 223/461 (48%), Gaps = 38/461 (8%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMR-KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +SL++ + ++  P   L  + ++R   G   D F +  +L AC++V +   G+++H   +
Sbjct: 126 SSLLSCHARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVV 185

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G     +   AL+ MY++CG + +AR +FD +   D + WS+MI  YHR G  +EAL 
Sbjct: 186 KSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALA 245

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M  M   P +V +++++S  A                                   
Sbjct: 246 LFSRMDKMGSAPDQVTLVTIISTLA----------------------------------- 270

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
               G L +A  L  ++   S V+W  +ISG+ +       + L+ +M    ++P+  T 
Sbjct: 271 --SSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTF 328

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++     +     G+ +HA  + +G + ++ + ++L+++Y KC     A+ +FD    
Sbjct: 329 ASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCE 388

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K++++WNA+++ + Q    ++A  +F +M    ++ +E T V +L  CT   +  +GK +
Sbjct: 389 KNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQV 448

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    K  +++ + +  A +DMY+K G +  A  LFS   Y+D   WNA+  G   +   
Sbjct: 449 HCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEE 508

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           EEA+     M   G+ P+ ++F   +NACS+      GK +
Sbjct: 509 EEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQI 549



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/520 (26%), Positives = 255/520 (49%), Gaps = 47/520 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           ++S++  Y +      AL +++ M K GS  D  T+ TI                     
Sbjct: 227 WSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTI--------------------- 265

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
                         I   +  G L  A  L  +MP    V+W+ +I G+ + GL    L 
Sbjct: 266 --------------ISTLASSGRLDHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLG 311

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + ++MR   + P+     SM+S  A++     G+ +HA  V +  D    V + ++LI++
Sbjct: 312 LYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDAN--VFVGSSLINL 369

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG  + AK +F+   + ++V W  M++G+++     E +R+F  M+   +   E T 
Sbjct: 370 YAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTF 429

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +S++  C ++    LGK +H   ++N  + SL +ANA +DMY K   I  A+ LF  +  
Sbjct: 430 VSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPY 489

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WNA+    AQ    ++A  +   M++  + P++V+    ++ C+   A E GK +
Sbjct: 490 KDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAINACSNIRATETGKQI 549

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    K G+  +  + ++L+D+Y+K GDV  + ++F++     I   NA++AG+  +   
Sbjct: 550 HCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSIVPINALIAGFVQNNNE 609

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +EA+  F  + + G+KP+ +TF  +L+ CS +       S   K VH   L   + +   
Sbjct: 610 DEAIQLFQQVLKDGLKPSSVTFSSILSGCSGS-----LNSAIGKQVHCYTLKSGVLYDDT 664

Query: 519 M--VDLLG---RAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           +  V L G   ++ +L++A++++  MP   N+  W A+++
Sbjct: 665 LLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWTAIIS 704



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/363 (22%), Positives = 158/363 (43%), Gaps = 42/363 (11%)

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           +A+H  ++R      L   +  +L+++Y K G + YA        + +  + + ++S + 
Sbjct: 76  RALHGRILRG--GSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCHA 133

Query: 252 RCNEINEGVRLFAEM-IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
           R     + +  F  +       P +  +  ++  C  VG L  G+ +H  ++++GF  S+
Sbjct: 134 RSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSV 193

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
               ALVDMY KC ++ +AR +FDG+   D + W+++I+ Y +  C  +A  LF  M   
Sbjct: 194 FCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKM 253

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
              P++VT+V ++S    +G L+                     TAL+        V   
Sbjct: 254 GSAPDQVTLVTIISTLASSGRLDHA-------------------TALLKKMPTPSTV--- 291

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
                         WNA+++G+   G     L  + DM   G+ P   TF  +L+A ++ 
Sbjct: 292 -------------AWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANM 338

Query: 491 GLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
               EG+ +    V HGL     +     +++L  + G   +A  +   +    N+++W 
Sbjct: 339 KAFVEGQQMHAAAVMHGLD--ANVFVGSSLINLYAKCGCPSDAKNVF-DLSCEKNIVMWN 395

Query: 550 ALL 552
           A+L
Sbjct: 396 AML 398



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 107/213 (50%), Gaps = 1/213 (0%)

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
           Q  + LH  ILR G      + ++LV++Y K   +  A +       +     ++++S +
Sbjct: 73  QTCRALHGRILRGGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAASSLLSCH 132

Query: 352 AQAHCIDKAFELFIHMKVSKV-RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
           A++         F +++ +   RP++  +  +LS C+  G L  G+ +H  + K G    
Sbjct: 133 ARSGSPGDVLGAFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSS 192

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
           V  + ALVDMYAKCGDV  A R+F      D   W++M+A Y   GC +EAL  F  M++
Sbjct: 193 VFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDK 252

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            G  P+ +T + +++  + +G +    ++  KM
Sbjct: 253 MGSAPDQVTLVTIISTLASSGRLDHATALLKKM 285


>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 874

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 217/578 (37%), Positives = 327/578 (56%), Gaps = 41/578 (7%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           +IH   IK GL  +      +I      E G +  AR +FDE+P   V  W+TMI+GY R
Sbjct: 53  QIHSQTIKTGLSSNHLFLTKVIIFCCTKESGDVYYARKVFDEIPQPSVFIWNTMIKGYSR 112

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI--HACVVRNCKDEKL 207
               E  + + + M   +I+P       ++  F     +  GK +  HA V+    D  L
Sbjct: 113 INCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHA-VIHGFLDSNL 171

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            V      I ++S CG + YA+++F+  +   VV+W V++SGY R     E  RLF EM 
Sbjct: 172 FVQ--KGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEME 229

Query: 268 E--ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF-EFSLAMANALVDMYGKCR 324
           +  E V P+ +T++ ++  C  +  L  GK ++   ++ G  E +L + NAL+DM+  C 
Sbjct: 230 KKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCG 289

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA------------------------ 360
           E+ +AR +FD MK++DV+ W ++++ +A    ID A                        
Sbjct: 290 EMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLR 349

Query: 361 -------FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
                    LF  M++S V+P+E TMV +L+ C   GALE+G+W  TYI+K  ++ D  +
Sbjct: 350 MNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFI 409

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
             AL+DMY KCG+V  A ++F+E   +D   W AM+ G   +G GEEAL  F  M  + V
Sbjct: 410 GNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASV 469

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
            P+ IT+IG++ AC+H GLV +GK  F  M    G+ P + HYGCMVDLLGRAG L EA 
Sbjct: 470 TPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEAL 529

Query: 534 EMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVAN 593
           E+I +MP++PN IVWG+LL A ++HKN  + E+AA +ILE+EP+N    VL+ NIYA   
Sbjct: 530 EVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACK 589

Query: 594 RWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +W ++  VR++M E  +KK PG S +E+NG+V++F+ G
Sbjct: 590 KWKNLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAG 627



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 229/484 (47%), Gaps = 70/484 (14%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y + N   S +++Y  M  +  + D FT P +LK   + +    GK +   A+
Sbjct: 103 WNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAV 162

Query: 99  KNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
            +G LD + +V    I ++S CG +  AR +FD     +VV+W+ ++ GY+R    EE+ 
Sbjct: 163 IHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESK 222

Query: 158 EVMREM--RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            +  EM  +   + P+ V ++ M+S  + + D+  GK I+   ++    E   + +  AL
Sbjct: 223 RLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEP-NLILENAL 281

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSV-------------------------------VSWT 244
           IDM++ CG +  A+ +F+ +    V                               VSWT
Sbjct: 282 IDMFASCGEMDAARGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWT 341

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
            MI GY+R N   E + LF +M   NV P E T++S++  C  +G L+LG+W   YI +N
Sbjct: 342 AMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKN 401

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
             +    + NAL+DMY KC  +  A+ +F+ M+ KD   W A+I   A     ++A  +F
Sbjct: 402 KIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGEEALTMF 461

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVDVILKTALVDMYAK 423
            +M  + V P+E+T +G++  CT  G +  GK   + +  Q G++ ++     +VD+  +
Sbjct: 462 SYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGR 521

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
            G +                               +EAL   ++M    VKPN I +  L
Sbjct: 522 AGHL-------------------------------KEALEVIMNMP---VKPNSIVWGSL 547

Query: 484 LNAC 487
           L AC
Sbjct: 548 LGAC 551


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 210/573 (36%), Positives = 312/573 (54%), Gaps = 16/573 (2%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF 129
           D   +  +++  A+      GK++H   I  G     +++N L+ MYS+CG L  A  LF
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           D MP R++VSW+ MI G  +     EA+     MR     P++ A  S +   A +  ++
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 190 LGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           +GK +H      C   K G+     + + L DMYSKCG +  A ++F  +     VSWT 
Sbjct: 124 MGKQMH------CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTA 177

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
           MI GY +  E  E +  F +MI+E V   +  + S +  CG +   + G+ +H+ +++ G
Sbjct: 178 MIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLG 237

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKS--KDVMIWNAVISAYAQAHCIDKAFEL 363
           FE  + + NAL DMY K  ++ SA  +F G+ S  ++V+ +  +I  Y +   I+K   +
Sbjct: 238 FESDIFVGNALTDMYSKAGDMESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSV 296

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F+ ++   + PNE T   L+  C    ALE G  LH  + K   + D  + + LVDMY K
Sbjct: 297 FVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGK 356

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
           CG +  A + F E        WN++++ +G HG G++A+ FF  M   GVKPN ITFI L
Sbjct: 357 CGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISL 416

Query: 484 LNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           L  CSHAGLV EG   F  M    G+VP  EHY C++DLLGRAG L EA E I  MP  P
Sbjct: 417 LTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEP 476

Query: 544 NMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRR 603
           N   W + L A ++H +  MG++AA +++++EP+N G  VL+SNIYA   +W DV  VR 
Sbjct: 477 NAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRM 536

Query: 604 VMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNW 636
            M++  VKK PG+S V+V    H F   G  +W
Sbjct: 537 RMRDGNVKKLPGYSWVDVGYKTHVF---GAEDW 566



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 220/428 (51%), Gaps = 13/428 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + ++++   +N+K S A+  +  MR  G     F   + ++ACA +    +GK++H 
Sbjct: 71  LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+K G+  + +V + L  MYS+CG++  A  +F+EMP +D VSW+ MI GY + G  EE
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAI 211
           AL   ++M   ++   +  + S +     +     G+++H+ VV      KLG    + +
Sbjct: 191 ALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVV------KLGFESDIFV 244

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQ-NSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
             AL DMYSK G++  A  +F   ++  +VVS+T +I GY+   +I +G+ +F E+  + 
Sbjct: 245 GNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG 304

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + P+E T  SLI  C     L+ G  LHA +++  F+    +++ LVDMYGKC  +  A 
Sbjct: 305 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAI 364

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
             FD +     + WN+++S + Q      A + F  M    V+PN +T + LL+ C+ AG
Sbjct: 365 QAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAG 424

Query: 391 ALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM-WNAM 448
            +E G  + ++  +  G+       + ++D+  + G +  A    +   +      W + 
Sbjct: 425 LVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSF 484

Query: 449 MAGYGMHG 456
           +    +HG
Sbjct: 485 LGACRIHG 492


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 219/628 (34%), Positives = 361/628 (57%), Gaps = 14/628 (2%)

Query: 17  HAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALN----IYAFMRKNGSEVDNF 72
           H  I  +   F Y +  N  + +NS++++Y++  K   A+N    +++         D +
Sbjct: 67  HGDISLSRSTFDYIHKKNIFS-WNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFY 125

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           T P ILKAC  ++    GK++H    K G + D +V+ +L+ +YS  G L  A  +F +M
Sbjct: 126 TFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDM 182

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           P +DV SW+ MI G+ + G    AL V+  M+   ++   + + S++ + A   DV  G 
Sbjct: 183 PVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGV 242

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
            IH  V+++  D    V ++ ALI+MYSK G L  A+ +F+++    +VSW  +I+ Y +
Sbjct: 243 LIHLHVLKHGLDSD--VFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQ 300

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF-EFSLA 311
            N+ +  +R F  M    + P  +T++SL      +   ++ + +  +++R  + +  + 
Sbjct: 301 NNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVV 360

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           + NALV+MY K   +  A T+FD +  KD + WN +++ Y Q     +A + +  M+  +
Sbjct: 361 IGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECR 420

Query: 372 -VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
              PN+ T V ++   +  GAL+ G  +H  + K  L +DV + T L+D+Y KCG +  A
Sbjct: 421 DTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDA 480

Query: 431 YRLFSEAIYRDICM-WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
             LF E I RD  + WNA++A  G+HG GEEAL  F DM    VK + ITF+ LL+ACSH
Sbjct: 481 MSLFYE-IPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSH 539

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           +GLV EG+  FD M    G+ P ++HYGCMVDLLGRAG L++A+E++++MP++P+  +WG
Sbjct: 540 SGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWG 599

Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR 609
           ALL+A K++ N  +G +A+ ++LE++ +N GY VL+SNIYA   +W  V  VR + ++  
Sbjct: 600 ALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRG 659

Query: 610 VKKEPGFSSVEVNGLVHKFIRGGMVNWK 637
           ++K PG+SSV V      F  G   + K
Sbjct: 660 LRKTPGWSSVVVGSKAEVFYTGNQTHPK 687



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 251/488 (51%), Gaps = 16/488 (3%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +  +C  V  T   K++H   +  G   +  +S  LI +Y   G +  +R  FD +  ++
Sbjct: 28  LFNSCVNVNAT---KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKN 84

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFM----DIRPSEVAMISMVSLFADVADVDLGK 192
           + SW+++I  Y R G   EA+  + ++  M     +RP       ++     + D   GK
Sbjct: 85  IFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GK 141

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
            +H CV +   ++   V +A +L+ +YS+ G L  A ++F  +    V SW  MISG+ +
Sbjct: 142 KVHCCVFKMGFEDD--VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQ 199

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
                  + +   M  E V    IT+ S++  C     +  G  +H ++L++G +  + +
Sbjct: 200 NGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFV 259

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
           +NAL++MY K   ++ A+ +FD M+ +D++ WN++I+AY Q +    A   F  M++  +
Sbjct: 260 SNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGI 319

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTY-IEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           RP+ +T+V L S+ ++     + + +  + I ++ L+ DV++  ALV+MYAK G +N A+
Sbjct: 320 RPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAH 379

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER-SGVKPNGITFIGLLNACSHA 490
            +F +   +D   WN ++ GY  +G   EA+  +  ME      PN  T++ ++ A SH 
Sbjct: 380 TVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHV 439

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           G + +G  +  K++    L   +    C++DL G+ G L++A  +   +P R   + W A
Sbjct: 440 GALQQGMKIHAKLIKN-SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP-RDTSVPWNA 497

Query: 551 LLAASKLH 558
           ++A+  +H
Sbjct: 498 IIASLGIH 505



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 143/276 (51%), Gaps = 17/276 (6%)

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ- 353
           K LHA +L  G   ++ ++  L+++Y    +I  +R+ FD +  K++  WN++ISAY + 
Sbjct: 39  KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 354 ------AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
                  +C++   +LF       +RP+  T   +L  C    +L  GK +H  + K G 
Sbjct: 99  GKYHEAMNCVN---QLFSMCGGGHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMGF 152

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
           E DV +  +LV +Y++ G ++ A+++F +   +D+  WNAM++G+  +G    AL     
Sbjct: 153 EDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNR 212

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSV-FDKMVHGLGLVPKIEHYGCMVDLLGRA 526
           M+  GVK + IT   +L  C+ +  V  G  +    + HGL     +     ++++  + 
Sbjct: 213 MKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLD--SDVFVSNALINMYSKF 270

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
           G L +A  +   M +R +++ W +++AA + + +PS
Sbjct: 271 GRLQDAQMVFDQMEVR-DLVSWNSIIAAYEQNNDPS 305


>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 902

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 198/596 (33%), Positives = 344/596 (57%), Gaps = 9/596 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++   ++N     A+ ++ +M++ G E D FT  ++L ACA +    LG+++    I
Sbjct: 269 WNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTI 328

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KN +D   +V+NA + M+S+ G++  A+ LF+ +  +D VSW+ ++ G       EEA+ 
Sbjct: 329 KNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIH 388

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALI 216
           +++ M    + P EV+  ++++  +++   + GK IH   +++  C +     A+ ++LI
Sbjct: 389 MLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNH----AVGSSLI 444

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           D YSK G++   +++  +++ +S+V   V+I+G ++ N  +E + LF +++ + + PS  
Sbjct: 445 DFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSF 504

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGF-EFSLAMANALVDMYGKCREIRSARTLFDG 335
           T  S++  C  +    +GK +H Y L++GF     ++  +LV  Y K R    A  L   
Sbjct: 505 TFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIE 564

Query: 336 MKS-KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
           M   K+++ W A++S YAQ     ++   F  M+   V P+EVT   +L  C+E  AL  
Sbjct: 565 MPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSD 624

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYG 453
           GK +H  I K G        +A++DMY+KCGD+  ++  F E    +DI +WN+M+ G+ 
Sbjct: 625 GKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFA 684

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +G  +EAL+ F  M+ S +K + +TF+G+L AC+HAGL++EG+  FD M    G++P++
Sbjct: 685 KNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRV 744

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           +HY C +DLLGR G L EA E+I  +P RP+ ++W   LAA ++HK+   GEIAA +++E
Sbjct: 745 DHYACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVE 804

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +EPQN    VL+SN+YA A  W +    R  M+E    K PG S + V      F+
Sbjct: 805 LEPQNSSTYVLLSNMYAAAGNWVEAKMAREAMREKGATKFPGCSWITVGNKTSLFL 860



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 134/521 (25%), Positives = 257/521 (49%), Gaps = 14/521 (2%)

Query: 39  YNSLVTSYIKNNK-PSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +N++++ Y + +        +Y  MR  G      T  ++L A A       G+++H  A
Sbjct: 167 WNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAA 226

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +++GLD + +V ++LI +Y++CG +  A  +FD    ++VV W+ M+ G  R     EA+
Sbjct: 227 VRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAI 286

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           ++   M+ + +   E   +S++   A +    LG+ +    ++NC D  L VA AT  +D
Sbjct: 287 QMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANAT--LD 344

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           M+SK G +  AK LFN +     VSW  ++ G     E  E + +   M  + V P E++
Sbjct: 345 MHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVS 404

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             ++I  C  +   + GK +H   +++    + A+ ++L+D Y K  ++ S R +   + 
Sbjct: 405 FATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVD 464

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           +  ++  N +I+   Q +  D+A +LF  +    ++P+  T   +LS CT   +  +GK 
Sbjct: 465 ASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQ 524

Query: 398 LHTYIEKQG-LEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
           +H Y  K G L  D  +  +LV  Y K      A +L  E   ++++  W A+++GY  +
Sbjct: 525 VHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQN 584

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G   ++L+ F  M    V P+ +TF  +L ACS    +++GK      +HGL +      
Sbjct: 585 GYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKE-----IHGLIIKSGFGS 639

Query: 516 Y----GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           Y      ++D+  + G +  + E  K +  + ++ +W +++
Sbjct: 640 YKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMI 680



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 231/462 (50%), Gaps = 14/462 (3%)

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN-RDVVSWSTMIRGY-HRGGLPEEA 156
           K G   D     A++   +  G L  AR L   MP     V+W+ +I GY  + G+  E 
Sbjct: 125 KMGSSPDRVTCVAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEV 184

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
             + ++MR   + P+     SM+S  A+      G+ +HA  VR+  D    V + ++LI
Sbjct: 185 FGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDAN--VFVGSSLI 242

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           ++Y+KCG +  A  +F+   + +VV W  M++G +R     E +++F  M    +   E 
Sbjct: 243 NLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEF 302

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T +S++  C  +    LG+ +    ++N  + SL +ANA +DM+ K   I  A+TLF+ +
Sbjct: 303 TYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLI 362

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             KD + WNA++         ++A  +   M +  V P+EV+   +++ C+   A E GK
Sbjct: 363 TYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGK 422

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H    K  +  +  + ++L+D Y+K GDV    ++ ++     I   N ++AG   + 
Sbjct: 423 QIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNN 482

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI--E 514
             +EA+  F  + R G+KP+  TF  +L+ C+  GL++   S+  K VH   L      +
Sbjct: 483 REDEAIDLFQQVLRDGLKPSSFTFSSILSGCT--GLLS---SIIGKQVHCYTLKSGFLND 537

Query: 515 HYGCMVDLLG---RAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
                V L+G   +A + ++A++++  MP   N++ W A+++
Sbjct: 538 DTSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVS 579



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 212/436 (48%), Gaps = 39/436 (8%)

Query: 66  GSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSA 125
           G   D F +   L AC+++     GK+ H  A K GL   A+ + AL+ MY+ CG +  A
Sbjct: 26  GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85

Query: 126 RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV 185
           R +F  +   D V W++MI GYHR G  +EA+ +   M  M   P  V  +++V      
Sbjct: 86  RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVV------ 139

Query: 186 ADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ-NSVVSWT 244
                      C +             TAL       G L  A+ L +R+   +S V+W 
Sbjct: 140 -----------CAL-------------TAL-------GRLEDARTLLHRMPAPSSTVAWN 168

Query: 245 VMISGYIRCNEI-NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
            +ISGY + + I +E   L+ +M    ++P+  T  S++           G+ +HA  +R
Sbjct: 169 AVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAVR 228

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
           +G + ++ + ++L+++Y KC  I  A  +FD    K+V++WNA+++   +     +A ++
Sbjct: 229 HGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQM 288

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F++MK   +  +E T V +L  C    +  +G+ +     K  ++  + +  A +DM++K
Sbjct: 289 FLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSK 348

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
            G ++ A  LF+   Y+D   WNA++ G   +   EEA+     M   GV P+ ++F  +
Sbjct: 349 FGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATV 408

Query: 484 LNACSHAGLVTEGKSV 499
           +NACS+      GK +
Sbjct: 409 INACSNIRATETGKQI 424



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 119/251 (47%), Gaps = 28/251 (11%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPL----------TRYNSLVTSYIKNNKP 52
           +K+GFLN + +      ++ T+ K       N L            + ++V+ Y +N   
Sbjct: 530 LKSGFLNDDTS--VGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYS 587

Query: 53  SSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNAL 112
             +L  +  MR      D  T  +ILKAC+++     GKEIHG  IK+G       ++A+
Sbjct: 588 YQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAI 647

Query: 113 IQMYSECGSLVSARYLFDEMPNR-DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPS 171
           I MYS+CG ++S+   F E+ ++ D+  W++MI G+ + G  +EAL + ++M+   I+  
Sbjct: 648 IDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSD 707

Query: 172 EVAMISMVSLFADVADVDLGK-------AIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
           EV  + ++   A    +  G+        ++  + R        V      ID+  + G+
Sbjct: 708 EVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPR--------VDHYACFIDLLGRGGH 759

Query: 225 LAYAKQLFNRL 235
           L  A+++ N L
Sbjct: 760 LQEAQEVINEL 770



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 71/132 (53%)

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           VRP++  +   LS C+  GAL  GK  H   EK+GL        ALV+MYA+CG V  A 
Sbjct: 27  VRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDAR 86

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
           R+F      D   W +M++GY   G  +EA+  F  ME+ G  P+ +T + ++ A +  G
Sbjct: 87  RVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALG 146

Query: 492 LVTEGKSVFDKM 503
            + + +++  +M
Sbjct: 147 RLEDARTLLHRM 158



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 126/315 (40%), Gaps = 46/315 (14%)

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
           +  S T ++  ++R    + G           V P +  + + +  C  +G L  GK  H
Sbjct: 4   ATTSATAVLDAFVRARRCSAG---------GGVRPDQFDLAATLSACSRLGALVSGKQAH 54

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
               + G       A ALV+MY +C  +  AR +F G+   D + W ++IS Y +A    
Sbjct: 55  CDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVFGGISLPDTVCWASMISGYHRAGRFQ 114

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALV 418
           +A  LF  M+     P+ VT V ++   T  G LE                    +T L 
Sbjct: 115 EAVCLFTRMEKMGSSPDRVTCVAVVCALTALGRLEDA------------------RTLLH 156

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH-GCGEEALIFFVDMERSGVKPNG 477
            M A    V                 WNA+++GY    G   E    + DM   G+ P  
Sbjct: 157 RMPAPSSTV----------------AWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTR 200

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK 537
            TF  +L+A ++A    EG+ V    V   GL   +     +++L  + G + +A  ++ 
Sbjct: 201 STFASMLSAAANATAFIEGRQVHAAAVRH-GLDANVFVGSSLINLYAKCGCIGDA-ILVF 258

Query: 538 SMPLRPNMIVWGALL 552
                 N+++W A+L
Sbjct: 259 DCSGEKNVVMWNAML 273


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/599 (34%), Positives = 343/599 (57%), Gaps = 16/599 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L++ Y +N+     L ++  M+  G++ ++FT    L   A+  +   G ++H   +
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KNGLD    VSN+LI +Y +CG++  AR LFD+   + VV+W++MI GY   GL  EAL 
Sbjct: 222 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATA 214
           +   MR   +R SE +  S++ L A++ ++   + +H  VV      K G      I TA
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVV------KYGFLFDQNIRTA 335

Query: 215 LIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           L+  YSKC  +  A +LF  +    +VVSWT MISG+++ +   E V LF+EM  + V P
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +E T   ++     +   ++    HA +++  +E S  +  AL+D Y K  ++  A  +F
Sbjct: 396 NEFTYSVILTALPVISPSEV----HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 451

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA-L 392
            G+  KD++ W+A+++ YAQ    + A ++F  +    ++PNE T   +L++C    A +
Sbjct: 452 SGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM 511

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
             GK  H +  K  L+  + + +AL+ MYAK G++  A  +F     +D+  WN+M++GY
Sbjct: 512 GQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGY 571

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             HG   +AL  F +M++  VK +G+TFIG+  AC+HAGLV EG+  FD MV    + P 
Sbjct: 572 AQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPT 631

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
            EH  CMVDL  RAG L++A ++I++MP      +W  +LAA ++HK   +G +AA +I+
Sbjct: 632 KEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKII 691

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            ++P++    VL+SN+YA +  W + A VR++M E  VKKEPG+S +EV    + F+ G
Sbjct: 692 AMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAG 750



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 151/525 (28%), Positives = 258/525 (49%), Gaps = 16/525 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           Y SL+  + ++ +   A  ++  + + G E+D     ++LK  A +     G+++H   I
Sbjct: 61  YISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCI 120

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   D  V  +L+  Y +  +    R +FDEM  R+VV+W+T+I GY R  + +E L 
Sbjct: 121 KFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLT 180

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M+    +P+     + + + A+      G  +H  VV+N  D+   + ++ +LI++
Sbjct: 181 LFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT--IPVSNSLINL 238

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCGN+  A+ LF++    SVV+W  MISGY       E + +F  M    V  SE + 
Sbjct: 239 YLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSF 298

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S+I  C  +  L+  + LH  +++ GF F   +  AL+  Y KC  +  A  LF  +  
Sbjct: 299 ASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGC 358

Query: 339 -KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
             +V+ W A+IS + Q    ++A +LF  MK   VRPNE T   +L+        E    
Sbjct: 359 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE---- 414

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H  + K   E    + TAL+D Y K G V  A ++FS    +DI  W+AM+AGY   G 
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            E A+  F ++ + G+KPN  TF  +LN C+     T       K  HG  +  +++   
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCA----ATNASMGQGKQFHGFAIKSRLDSSL 530

Query: 518 C----MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           C    ++ +  + G ++ A E+ K    + +++ W ++++    H
Sbjct: 531 CVSSALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQH 574



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 229/436 (52%), Gaps = 13/436 (2%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYA 60
           + + N  +NL    +C  ++ K    F  T + + +T +NS+++ Y  N     AL ++ 
Sbjct: 229 IPVSNSLINL--YLKC-GNVRKARILFDKTEVKSVVT-WNSMISGYAANGLDLEALGMFY 284

Query: 61  FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECG 120
            MR N   +   +  +++K CA +      +++H   +K G   D  +  AL+  YS+C 
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344

Query: 121 SLVSARYLFDEMPN-RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV 179
           +++ A  LF E+    +VVSW+ MI G+ +    EEA+++  EM+   +RP+E     ++
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
           +    ++  +    +HA VV+   + +    + TAL+D Y K G +  A ++F+ ++   
Sbjct: 405 TALPVISPSE----VHAQVVKT--NYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKD 458

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV-GGLQLGKWLH 298
           +V+W+ M++GY +  E    +++F E+ +  + P+E T  S++  C      +  GK  H
Sbjct: 459 IVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFH 518

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
            + +++  + SL +++AL+ MY K   I SA  +F   + KD++ WN++IS YAQ     
Sbjct: 519 GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAM 578

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTAL 417
           KA ++F  MK  KV+ + VT +G+ + CT AG +E G K+    +    +       + +
Sbjct: 579 KALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCM 638

Query: 418 VDMYAKCGDVNGAYRL 433
           VD+Y++ G +  A ++
Sbjct: 639 VDLYSRAGQLEKAMKV 654



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 227/442 (51%), Gaps = 27/442 (6%)

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           L +A  LFD+ P RD  S+ +++ G+ R G  +EA  +   +  + +        S++ +
Sbjct: 43  LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102

Query: 182 FADVADVDLGKAIH-ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
            A + D   G+ +H  C+     D+   V++ T+L+D Y K  N    +++F+ + + +V
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDD---VSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI---LSLIIECGFVG-GLQLGKW 296
           V+WT +ISGY R +  +E + LF  M  E   P+  T    L ++ E G  G GLQ    
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ---- 215

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           +H  +++NG + ++ ++N+L+++Y KC  +R AR LFD  + K V+ WN++IS YA    
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
             +A  +F  M+++ VR +E +   ++ LC     L   + LH  + K G   D  ++TA
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335

Query: 417 LVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           L+  Y+KC  +  A RLF E     ++  W AM++G+  +   EEA+  F +M+R GV+P
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG----CMVDLLGRAGLLDE 531
           N  T+  +L A            +    VH   +    E        ++D   + G ++E
Sbjct: 396 NEFTYSVILTALP---------VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEE 446

Query: 532 AHEMIKSMPLRPNMIVWGALLA 553
           A ++   +  + +++ W A+LA
Sbjct: 447 AAKVFSGIDDK-DIVAWSAMLA 467



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/382 (23%), Positives = 176/382 (46%), Gaps = 33/382 (8%)

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM------IEENVFPSEITILSL 281
           A  LF++       S+  ++ G+ R     E  RLF  +      ++ ++F S + + + 
Sbjct: 46  AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           + +  F      G+ LH   ++ GF   +++  +LVD Y K    +  R +FD MK ++V
Sbjct: 106 LCDELF------GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           + W  +IS YA+    D+   LF+ M+    +PN  T    L +  E G    G  +HT 
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 219

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
           + K GL+  + +  +L+++Y KCG+V  A  LF +   + +  WN+M++GY  +G   EA
Sbjct: 220 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 279

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVD 521
           L  F  M  + V+ +  +F  ++  C++   +      F + +H       +  YG + D
Sbjct: 280 LGMFYSMRLNYVRLSESSFASVIKLCANLKELR-----FTEQLH-----CSVVKYGFLFD 329

Query: 522 LLGRAGLLD---------EAHEMIKSMPLRPNMIVWGALLAA--SKLHKNPSMGEIAATQ 570
              R  L+          +A  + K +    N++ W A+++       K  ++   +  +
Sbjct: 330 QNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMK 389

Query: 571 ILEIEPQNYGYNVLMSNIYAVA 592
              + P  + Y+V+++ +  ++
Sbjct: 390 RKGVRPNEFTYSVILTALPVIS 411


>gi|357143056|ref|XP_003572787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Brachypodium distachyon]
          Length = 594

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 221/591 (37%), Positives = 324/591 (54%), Gaps = 15/591 (2%)

Query: 35  PLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           P++  NSL+ SY        A+ +Y+ MR      D+ T P   KAC  + ++  G+ +H
Sbjct: 6   PVSLANSLLRSYTGLGHYREAVALYSGMRS----FDHLTFPFAAKACGGLRLSRHGRAVH 61

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
             A+  G   D YV NALI MY  CG + +A  +F  M NR VVSW+ +I G  +    E
Sbjct: 62  CRALAAGFGDDTYVQNALISMYMGCGDVAAAEAVFCAMQNRTVVSWNAVIAGCVKNDCAE 121

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV-RNCKDEKLGVAIAT 213
            ALEV  EM           ++S++   A   ++ +G+A+H  V  R   D     A+  
Sbjct: 122 RALEVFGEMAGDGTEIDRATVVSVLPACAQAKNLSIGRAVHQLVEERGLADY---AAVKN 178

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQN-SVVSWTVMISGYIRCNEINEGVRLFAEMIEEN-- 270
           ALIDMY KC NL  A+++F+    +  VVSWTVMI  Y+  + + E   L  EM+  +  
Sbjct: 179 ALIDMYGKCRNLEGARKVFDDHKYDKDVVSWTVMIGAYVLNDHVEEAFALGHEMLMTSGA 238

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
            +P+ +T+  L+  C  + G    K +HA  +R G E  + +  AL+D Y KC  ++   
Sbjct: 239 PWPNGVTMAYLLSACSRLSGRH-AKCMHAMCIRLGLESDIIVETALMDAYAKCHNMKMME 297

Query: 331 -TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
            TL +G  S+    WNA IS Y       KA EL   M     RP+  TM  +L    E+
Sbjct: 298 LTLENG--SRRTETWNATISGYTHNEQEKKAIELLKRMIAESARPDSATMASILPAYAES 355

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
             +     +H Y+   G      + T L+++YAK GD++ ++ LF     +D+  W  ++
Sbjct: 356 ADVRQATNIHCYLLTLGFLRSTEITTGLINVYAKAGDLDVSWSLFDGLPEKDVVAWTTVI 415

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           AGYGMHG  + +++ +  M + GVKPN +TF  LL ACSH G+V EG  +F+ M    G+
Sbjct: 416 AGYGMHGQAQTSILLYNRMVQLGVKPNTVTFASLLYACSHVGMVDEGLQLFEDMRGIHGV 475

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
           +P  +HY  +VD++GRAG ++EA+ +I+ MPL P+  VWGALL A  LHKN   GE+AA 
Sbjct: 476 MPNADHYSSLVDMVGRAGRIEEAYRLIEDMPLEPSTSVWGALLGACVLHKNVKFGEVAAK 535

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
            + E+EP+N G +VL+ NIYA A+RW+DV  VRR M E  + KE G S VE
Sbjct: 536 HLFELEPKNTGNHVLLGNIYAAADRWSDVQDVRRRMAEKGLSKESGSSLVE 586


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 203/593 (34%), Positives = 334/593 (56%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L++ + +     SAL I+  MR +G   D  TI ++L ACA +   + GK++H + +
Sbjct: 212 FNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLL 271

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+  D  +  +L+ +Y +CG +V A  +F      +VV W+ M+  Y +     ++ +
Sbjct: 272 KAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFD 331

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M    +RP+E     ++       +++LG+ IH   ++   +  + V+    LIDM
Sbjct: 332 LFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVS--GVLIDM 389

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSK G L  A+++   L    VVSWT MI+GY++     E +  F +M    ++P  I +
Sbjct: 390 YSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGL 449

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S I  C  +  ++ G+ +H+ +  +G+   +++ NALV++Y +C   + A +LF+ ++ 
Sbjct: 450 ASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEH 509

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN ++S +AQ+   ++A E+FI M  + V+ N  T V  +S       ++ GK +
Sbjct: 510 KDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQI 569

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + K G   +  +  AL+ +Y KCG +  A   F E   R+   WN ++     HG G
Sbjct: 570 HATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWG 629

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F  M++ G+KPN +TFIG+L ACSH GLV EG   F  M    G+ P+ +HY C
Sbjct: 630 LEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYAC 689

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VD+LGRAG LD A + ++ MP+  N +VW  LL+A ++HKN  +GE+AA  +LE+EP +
Sbjct: 690 VVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHD 749

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VL+SN YAV  +W     VR++MK+  V+KEPG S +EV  +VH F  G
Sbjct: 750 SASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVG 802



 Score =  251 bits (641), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 163/559 (29%), Positives = 281/559 (50%), Gaps = 14/559 (2%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC-AQVLMTHLGKEIHGFAI 98
           N  +T ++ +  P   L+++A   +    + +      L+ C   V    L   IH  AI
Sbjct: 10  NKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPVIHAKAI 69

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             GL  D    N LI +Y++ G +  AR +F+++  RD VSW  M+ GY R GL EEA+ 
Sbjct: 70  TCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVG 129

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR--NCKDEKLGVAIATALI 216
           +  +M    + P+   + S++S     A  + G+ +HA V +  +C +  +G     ALI
Sbjct: 130 LYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVG----NALI 185

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
            +Y + G+L+ A+++F+ +     V++  +IS + +C      + +F EM      P  +
Sbjct: 186 ALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCV 245

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           TI SL+  C  +G L  GK LH+Y+L+ G      +  +L+D+Y KC  I  A  +F   
Sbjct: 246 TIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSG 305

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
              +V++WN ++ AY Q   + K+F+LF  M  + VRPNE T   LL  CT AG + +G+
Sbjct: 306 DRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGE 365

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H    K G E D+ +   L+DMY+K G ++ A R+      +D+  W +M+AGY  H 
Sbjct: 366 QIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHE 425

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             +EAL  F DM+  G+ P+ I     ++AC+    + +G+ +  + V+  G    +  +
Sbjct: 426 FCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSR-VYVSGYSADVSIW 484

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
             +V+L  R G   EA  + +++  + + I W  +++         + E A    +++  
Sbjct: 485 NALVNLYARCGRSKEAFSLFEAIEHK-DKITWNGMVSG---FAQSGLYEEALEVFIKMYQ 540

Query: 577 QNYGYNV--LMSNIYAVAN 593
               YNV   +S+I A AN
Sbjct: 541 AGVKYNVFTFVSSISASAN 559


>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g09040, mitochondrial; Flags: Precursor
 gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
 gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1028

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 205/596 (34%), Positives = 338/596 (56%), Gaps = 6/596 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y  N +    + ++  M+ +G  +D+FT  ++L  CA      +G + H   I
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K  L  + +V NAL+ MY++CG+L  AR +F+ M +RD V+W+T+I  Y +     EA +
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFD 515

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + + M    I      + S +     V  +  GK +H   V+   D  L     ++LIDM
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTG--SSLIDM 573

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSKCG +  A+++F+ L + SVVS   +I+GY + N + E V LF EM+   V PSEIT 
Sbjct: 574 YSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITF 632

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA-MANALVDMYGKCREIRSARTLFDGMK 337
            +++  C     L LG   H  I + GF      +  +L+ MY   R +  A  LF  + 
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS 692

Query: 338 S-KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           S K +++W  ++S ++Q    ++A + +  M+   V P++ T V +L +C+   +L  G+
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGR 752

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMH 455
            +H+ I     ++D +    L+DMYAKCGD+ G+ ++F E   R ++  WN+++ GY  +
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKN 812

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  E+AL  F  M +S + P+ ITF+G+L ACSHAG V++G+ +F+ M+   G+  +++H
Sbjct: 813 GYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDH 872

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
             CMVDLLGR G L EA + I++  L+P+  +W +LL A ++H +   GEI+A +++E+E
Sbjct: 873 VACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELE 932

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           PQN    VL+SNIYA    W     +R+VM++  VKK PG+S ++V    H F  G
Sbjct: 933 PQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAG 988



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 151/531 (28%), Positives = 250/531 (47%), Gaps = 53/531 (9%)

Query: 32  IINPLTR-YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           I++P T  +  L + Y+K   P  A+ ++  MR  G   D+    T+             
Sbjct: 221 IVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV------------- 267

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
                                 I  Y   G L  AR LF EM + DVV+W+ MI G+ + 
Sbjct: 268 ----------------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKR 305

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           G    A+E    MR   ++ +   + S++S    VA++DLG  +HA  +      KLG+A
Sbjct: 306 GCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI------KLGLA 359

Query: 211 ----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
               + ++L+ MYSKC  +  A ++F  L + + V W  MI GY    E ++ + LF +M
Sbjct: 360 SNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
                   + T  SL+  C     L++G   H+ I++     +L + NALVDMY KC  +
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             AR +F+ M  +D + WN +I +Y Q     +AF+LF  M +  +  +   +   L  C
Sbjct: 480 EDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKAC 539

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
           T    L  GK +H    K GL+ D+   ++L+DMY+KCG +  A ++FS      +   N
Sbjct: 540 THVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMN 599

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           A++AGY  +   EEA++ F +M   GV P+ ITF  ++ AC     +T G + F   +  
Sbjct: 600 ALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLG-TQFHGQITK 657

Query: 507 LGLVPKIEHYGCMVDLLG---RAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            G   + E+ G  + LLG    +  + EA  +   +    ++++W  +++ 
Sbjct: 658 RGFSSEGEYLG--ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSG 706



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 122/482 (25%), Positives = 227/482 (47%), Gaps = 48/482 (9%)

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
           L   +GK +H  ++  G+D +  + NA++ +Y++C  +  A   FD +  +DV +W++M+
Sbjct: 74  LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSML 132

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
             Y   G P + L     +    I P++     ++S  A   +V+ G+ IH  ++     
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI----- 187

Query: 205 EKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
            K+G+        AL+DMY+KC  ++ A+++F  +   + V WT + SGY++     E V
Sbjct: 188 -KMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAV 246

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
            +F  M +E   P  +  +++I                                   + Y
Sbjct: 247 LVFERMRDEGHRPDHLAFVTVI-----------------------------------NTY 271

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
            +  +++ AR LF  M S DV+ WN +IS + +  C   A E F +M+ S V+    T+ 
Sbjct: 272 IRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLG 331

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
            +LS       L++G  +H    K GL  ++ + ++LV MY+KC  +  A ++F     +
Sbjct: 332 SVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK 391

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           +   WNAM+ GY  +G   + +  F+DM+ SG   +  TF  LL+ C+ +  +  G S F
Sbjct: 392 NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG-SQF 450

Query: 501 DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
             ++    L   +     +VD+  + G L++A ++ + M  R N + W  ++ +    +N
Sbjct: 451 HSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN-VTWNTIIGSYVQDEN 509

Query: 561 PS 562
            S
Sbjct: 510 ES 511



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 178/382 (46%), Gaps = 32/382 (8%)

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG-VRLFAEMIEEN 270
           ++A+ D +S    L+Y+  L  R+  + + S   +   + R  EI  G  +LF      +
Sbjct: 10  SSAMFDSFSFVRRLSYSPDLGRRIYGHVLPSHDQI---HQRLLEICLGQCKLFKSRKVFD 66

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
             P  + +            L++GK +H+  L  G +    + NA+VD+Y KC ++  A 
Sbjct: 67  EMPQRLAL-----------ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAE 115

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
             FD ++ KDV  WN+++S Y+      K    F+ +  +++ PN+ T   +LS C    
Sbjct: 116 KQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARET 174

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
            +E G+ +H  + K GLE +     ALVDMYAKC  ++ A R+F   +  +   W  + +
Sbjct: 175 NVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFS 234

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           GY   G  EEA++ F  M   G +P+ + F+ ++N     G + + + +F +M       
Sbjct: 235 GYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS----- 289

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSM---PLRPNMIVWGALLAASKLHKNPSMGEIA 567
           P +  +  M+   G+ G    A E   +M    ++      G++L+A  +  N  +G + 
Sbjct: 290 PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVV 349

Query: 568 ATQILEIEPQNYGYNVLMSNIY 589
             + +++         L SNIY
Sbjct: 350 HAEAIKLG--------LASNIY 363



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 1/169 (0%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           FS  +    +  +  +++ + +N     AL  Y  MR +G   D  T  T+L+ C+ +  
Sbjct: 688 FSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSS 747

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR-DVVSWSTMIR 145
              G+ IH        D D   SN LI MY++CG +  +  +FDEM  R +VVSW+++I 
Sbjct: 748 LREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLIN 807

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           GY + G  E+AL++   MR   I P E+  + +++  +    V  G+ I
Sbjct: 808 GYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 214/591 (36%), Positives = 335/591 (56%), Gaps = 3/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N +V  Y K      AL++Y  M   G   D +T P +L++C  V    +G+E+H   +
Sbjct: 163 WNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVL 222

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G   +  V NAL+ MY++CG +V+AR +FD M   D +SW+ MI G+   G     LE
Sbjct: 223 RFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFENGECNAGLE 282

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M   +++P+ + + S+      ++D+   K +H   V+  +     VA   +LI M
Sbjct: 283 LFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVK--RGFATDVAFCNSLIQM 340

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+  G +  A+ +F+R++    +SWT MISGY +    ++ + ++A M   NV P +ITI
Sbjct: 341 YASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITI 400

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +  C  +G L +G  LH      GF   + + NAL++MY K + I  A  +F  M  
Sbjct: 401 ASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPE 460

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KDV+ W+++I+ +   H   +A   F HM ++ V+PN VT +  L+ C   GAL  GK +
Sbjct: 461 KDVVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKPNSVTFIAALAACAATGALRSGKEI 519

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ + G+  +  L  AL+D+Y KCG    A+  F     +D+  WN M+AG+  HG G
Sbjct: 520 HAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNG 579

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           E AL FF  M + G  P+ +TF+ LL ACS  G+V+EG  +F  M     +VP ++HY C
Sbjct: 580 ETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYAC 639

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLL R G L EA+  I  MP+ P+  VWGALL   ++H++  +GE+AA  +LE+EP +
Sbjct: 640 MVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLELEPND 699

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            GY+VL+ ++YA A  W+ +A VR+ M+E  +  + G S VEV G+VH F+
Sbjct: 700 AGYHVLLCDLYADAGIWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFL 750



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/392 (33%), Positives = 218/392 (55%), Gaps = 3/392 (0%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           + NA++ M    G    A  +F +MP RDV SW+ M+ GY + GL EEAL++   M +  
Sbjct: 131 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAG 190

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
           +RP       ++     V D  +G+ +HA V+R    E+  V +  AL+ MY+KCG++  
Sbjct: 191 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEE--VDVLNALMTMYAKCGDVVA 248

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A+++F+ +     +SW  MI+G+    E N G+ LF  M+++ V P+ +TI S+ +  G 
Sbjct: 249 ARKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGL 308

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
           +  +   K +H   ++ GF   +A  N+L+ MY     +  ART+F  M ++D M W A+
Sbjct: 309 LSDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAM 368

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           IS Y +    DKA E++  M+V+ V P+++T+   L+ C   G+L++G  LH   E +G 
Sbjct: 369 ISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGF 428

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
              V++  AL++MYAK   ++ A  +F     +D+  W++M+AG+  +    EAL +F  
Sbjct: 429 MSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRH 488

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           M  + VKPN +TFI  L AC+  G +  GK +
Sbjct: 489 M-LADVKPNSVTFIAALAACAATGALRSGKEI 519



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 195/384 (50%), Gaps = 4/384 (1%)

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           P E A +++  L      V+ G  + AC   + +    G+ +  A++ M  + G   +A 
Sbjct: 92  PDEDAYVALFRLCEWRRAVEPG--LRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAW 149

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           ++F ++ +  V SW VM+ GY +   + E + L+  M+   V P   T   ++  CG V 
Sbjct: 150 RVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVP 209

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
             ++G+ +HA++LR GF   + + NAL+ MY KC ++ +AR +FD M   D + WNA+I+
Sbjct: 210 DWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIA 269

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
            + +    +   ELF+ M   +V+PN +T+  +         +   K +H    K+G   
Sbjct: 270 GHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFAT 329

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           DV    +L+ MYA  G +  A  +FS    RD   W AM++GY  +G  ++AL  +  ME
Sbjct: 330 DVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALME 389

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
            + V P+ IT    L AC+  G +  G  + + +    G +  +     ++++  ++  +
Sbjct: 390 VNNVSPDDITIASALAACACLGSLDVGVKLHE-LAESKGFMSYVVVTNALLEMYAKSKRI 448

Query: 530 DEAHEMIKSMPLRPNMIVWGALLA 553
           D+A E+ K MP + +++ W +++A
Sbjct: 449 DKAIEVFKCMPEK-DVVSWSSMIA 471


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 199/594 (33%), Positives = 330/594 (55%), Gaps = 2/594 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+  Y    +   AL ++  +++ G EV++F + TILK    +    L   IH  A 
Sbjct: 116 FVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACAC 175

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G D +A+V  ALI  YS CG++  AR +FD +  +D V+W+ M+  Y    +PE AL 
Sbjct: 176 KLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALN 235

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
              +MR    +P+   + S +     ++   LGK IH C V+   D +  V    AL+DM
Sbjct: 236 TFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLYDTEPHVG--GALLDM 293

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG++  A  +F  +  + V+ W+ +IS Y +  +  +   +F  M+   V P+E ++
Sbjct: 294 YAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSL 353

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
             ++  C  +  L+LG+ +H   ++ G+E  L + NAL+DMY KCR + ++  +F  ++ 
Sbjct: 354 SGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQD 413

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            + + WN +I  Y Q+   + A  +F  M+ + +   +VT   +L  C    +++    +
Sbjct: 414 ANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQI 473

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H+ IEK     D I+  +L+D YAKCG +  A ++F   +  D+  WN++++ Y +HG  
Sbjct: 474 HSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRA 533

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
             AL  F  M +S +K N +TF+ LL+ C   GLV +G  +F+ M+    + P +EHY C
Sbjct: 534 TNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTC 593

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +V LLGRAG L +A + I  +P  P+ +VW ALL++  +HKN ++G  AA ++L+IEP +
Sbjct: 594 IVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDIEPHD 653

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
               VL+SN+YA A   ++VA  R+ M+ + VKKE G S VE+ G VH F  G 
Sbjct: 654 ETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWVEIKGEVHAFSVGS 707



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 251/494 (50%), Gaps = 8/494 (1%)

Query: 68  EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG--LDGDAYVSNALIQMYSECGSLVSA 125
           ++D++     L+ C        G+ +H   ++ G     D + +N L+  Y++ G L +A
Sbjct: 42  KLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATA 101

Query: 126 RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV 185
           R LFD MP R+ VS+ T+++GY   G  EEALE+ R ++      +   + +++ +   +
Sbjct: 102 RRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTM 161

Query: 186 ADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
               L   IHAC  +   D      + TALID YS CG + +A+ +F+ +     V+WT 
Sbjct: 162 DAPGLACGIHACACKLGHDRN--AFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTA 219

Query: 246 MISGYIRCNEINE-GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
           M+S Y   N+I E  +  F++M      P+   + S +     +    LGK +H   ++ 
Sbjct: 220 MVSCYSE-NDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSVKT 278

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
            ++    +  AL+DMY KC +I  A  +F+ +   DV++W+ +IS YAQ+   ++AFE+F
Sbjct: 279 LYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMF 338

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC 424
           + M  S V PNE ++ G+L  C     LE+G+ +H    K G E ++ +  AL+DMYAKC
Sbjct: 339 LRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKC 398

Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
            ++  +  +FS     +   WN ++ GY   G  E+AL  F +M  + +    +TF  +L
Sbjct: 399 RNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVL 458

Query: 485 NACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
            AC++   +     +   ++              ++D   + G + +A ++ +S+ +  +
Sbjct: 459 RACANTSSIKHAVQI-HSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESI-VECD 516

Query: 545 MIVWGALLAASKLH 558
           ++ W ++++A  LH
Sbjct: 517 VVSWNSIISAYALH 530


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 217/597 (36%), Positives = 339/597 (56%), Gaps = 10/597 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMR-KNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           L  +N LV  Y K      A+ +Y  M    G + D +T P +L+ C  +     GKE+H
Sbjct: 160 LFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVH 219

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
              ++ G + D  V NALI MY +CG + SAR LFD MP RD++SW+ MI GY   G+  
Sbjct: 220 VHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCH 279

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           E LE+   MR + + P  + + S++S    + D  LG+ IHA V+       + +++  +
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITT--GFAVDISVCNS 337

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L  MY   G+   A++LF+R+ +  +VSWT MISGY      ++ +  +  M +++V P 
Sbjct: 338 LTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPD 397

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           EIT+ +++  C  +G L  G  LH   ++      + +AN L++MY KC+ I  A  +F 
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH 457

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK--VRPNEVTMVGLLSLCTEAGAL 392
            +  K+V+ W ++I   A     ++ FE  I ++  K  ++PN +T+   L+ C   GAL
Sbjct: 458 NIPRKNVISWTSII---AGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGAL 514

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
             GK +H ++ + G+ +D  L  AL+DMY +CG +N A+  F+    +D+  WN ++ GY
Sbjct: 515 MCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGY 573

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
              G G   +  F  M +S V+P+ ITFI LL  CS + +V +G   F KM    G+ P 
Sbjct: 574 SERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPN 632

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           ++HY C+VDLLGRAG L EAH+ I+ MP+ P+  VWGALL A ++H    +GE++A  I 
Sbjct: 633 LKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIF 692

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           E++ ++ GY +L+ N+YA   +W +VA VRR+MKE  +  + G S VEV G VH F+
Sbjct: 693 ELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFL 749



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 149/517 (28%), Positives = 259/517 (50%), Gaps = 9/517 (1%)

Query: 49  NNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYV 108
           N K   A+ +   M++    VD      +++ C        G +++  A+ +       +
Sbjct: 72  NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD- 167
            NA + M+   G+LV A Y+F +M  R++ SW+ ++ GY + G  +EA+ +   M ++  
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
           ++P       ++     + D+  GK +H  VVR     +L + +  ALI MY KCG++  
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR--YGYELDIDVVNALITMYVKCGDVKS 249

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A+ LF+R+ +  ++SW  MISGY      +EG+ LF  M   +V P  +T+ S+I  C  
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
           +G  +LG+ +HAY++  GF   +++ N+L  MY      R A  LF  M+ KD++ W  +
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           IS Y      DKA + +  M    V+P+E+T+  +LS C   G L+ G  LH    K  L
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
              VI+   L++MY+KC  ++ A  +F     +++  W +++AG  ++    EALIF   
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQ 489

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRA 526
           M+ + ++PN IT    L AC+  G +  GK +   ++  G+GL   + +   ++D+  R 
Sbjct: 490 MKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN--ALLDMYVRC 546

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
           G ++ A     S   + ++  W  LL         SM
Sbjct: 547 GRMNTAWSQFNSQ--KKDVTSWNILLTGYSERGQGSM 581


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 195/596 (32%), Positives = 345/596 (57%), Gaps = 9/596 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  +++N      + ++ +MR+   E D+FT  ++L AC  +    LG+++H   I
Sbjct: 393 WNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITI 452

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KNG+D D +V+NA++ MYS+ G++  A+ LF  +P +D VSW+ +I G        EA+ 
Sbjct: 453 KNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAIN 512

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALI 216
           +++ M+F  I   EV+  + ++  +++  ++ GK IH+  ++   C +     A+ ++LI
Sbjct: 513 MLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNH----AVGSSLI 568

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           D+YSK G++  ++++   ++ +S+V    +I+G ++ N  +E + LF +++++   PS  
Sbjct: 569 DLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNF 628

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTLFDG 335
           T  S++  C       +GK +H Y L++       ++  +LV +Y KC+ +  A  L + 
Sbjct: 629 TFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEE 688

Query: 336 MKS-KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
           +   K+++ W A IS YAQ     ++  +F  M+   VR +E T   +L  C+E  AL  
Sbjct: 689 VPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTD 748

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYG 453
           GK +H  I K G        +AL+DMY+KCGDV  ++ +F E   R +I  WN+M+ G+ 
Sbjct: 749 GKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNSMIVGFA 808

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +G   EAL+ F  M+ S +KP+ +T +G+L ACSHAGL++EG   FD M    G+VP++
Sbjct: 809 KNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHFFDSMSQVYGIVPRV 868

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           +HY C++DLLGR G L +A E+I  +P R + ++W   LAA ++HK+   G++AA +++E
Sbjct: 869 DHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAACQMHKDEERGKVAAKKLVE 928

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +EPQ+    V +S+++A A  W +    R  M+E  V K PG S + V      F+
Sbjct: 929 MEPQSSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKQSVFV 984



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 227/459 (49%), Gaps = 38/459 (8%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKN-GSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
           +++ + ++  P   L+ +  +R + GS  D F I  +L AC+++     G+++H   +K+
Sbjct: 127 VLSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKS 186

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G     +    L+ MY++CG +  AR +FD +   D + W++MI GYHR G  ++AL + 
Sbjct: 187 GFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALF 246

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
             M  M   P +V  ++++S  A +                                   
Sbjct: 247 SRMEKMGSVPDQVTCVTIISTLASM----------------------------------- 271

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
             G L  A+ L  R+   S V+W  +I+ Y +    +E   L+ +M ++ + P+  T  S
Sbjct: 272 --GRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFAS 329

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           ++     +     G+ +HA  +++G + ++ + ++L+++Y K   I  A+ +FD    K+
Sbjct: 330 ILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKN 389

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           +++WNA++  + Q    ++  ++F +M+ + +  ++ T V +L  C    +L++G+ +H 
Sbjct: 390 IVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHC 449

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
              K G++ D+ +  A++DMY+K G ++ A  LFS    +D   WNA++ G   +    E
Sbjct: 450 ITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGE 509

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           A+     M+  G+  + ++F   +NACS+   +  GK +
Sbjct: 510 AINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQI 548



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 140/573 (24%), Positives = 262/573 (45%), Gaps = 71/573 (12%)

Query: 10  LEQTRQCHAHIIKTHFKFS-----------------------YTNIINPLTR-YNSLVTS 45
           LE  RQ H  ++K+ F  S                       +  I  P T  + S++  
Sbjct: 173 LEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAG 232

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
           Y +  +   AL +++ M K GS  D  T  TI+   A +                     
Sbjct: 233 YHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASM--------------------- 271

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
                         G L  AR L   +     V+W+ +I  Y + GL  E   + ++M+ 
Sbjct: 272 --------------GRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKK 317

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
             + P+     S++S  A++   D G+ IHA  V++  D    V + ++LI++Y K G +
Sbjct: 318 QGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDAN--VFVGSSLINLYVKHGCI 375

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
           + AK++F+   + ++V W  ++ G+++     E +++F  M   ++   + T +S++  C
Sbjct: 376 SDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGAC 435

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
             +  L LG+ +H   ++NG +  L +ANA++DMY K   I  A+ LF  +  KD + WN
Sbjct: 436 INLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWN 495

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
           A+I   A      +A  +   MK   +  +EV+    ++ C+   A+E GK +H+   K 
Sbjct: 496 ALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKY 555

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
            +  +  + ++L+D+Y+K GDV  + ++ +      I   NA++ G   +   +EA+  F
Sbjct: 556 NVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELF 615

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI--EHYGCMVDLL 523
             + + G KP+  TF  +L+ C+         SV  K VH   L   I  +     + L+
Sbjct: 616 QQVLKDGFKPSNFTFTSILSGCTR-----PVSSVIGKQVHCYTLKSAILNQDTSLGISLV 670

Query: 524 G---RAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           G   +  LL++A+++++ +P   N++ W A ++
Sbjct: 671 GIYLKCKLLEDANKLLEEVPDHKNLVEWTATIS 703



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 154/364 (42%), Gaps = 44/364 (12%)

Query: 196 ACVVRNCKDEKLGVAI----ATALIDMYSKCGNLAYAKQLFNRLN--QNSVVSWTVMISG 249
           AC V + +  +LG+ +      AL+D+Y + G + YA +          S  + + ++S 
Sbjct: 71  ACGVLHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSC 130

Query: 250 YIRCNEINEGVRLFAEM-IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
           + R     + +  F  +       P +  I  ++  C  +G L+ G+ +H  +L++GF  
Sbjct: 131 HARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCS 190

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
           S+     LVDMY KC E+  AR +FDG+   D + W ++I+ Y +     +A  LF  M+
Sbjct: 191 SVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRME 250

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
                P++VT V ++S     G L                                GD  
Sbjct: 251 KMGSVPDQVTCVTIISTLASMGRL--------------------------------GD-- 276

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A  L           WNA++A Y   G   E    + DM++ G+ P   TF  +L+A +
Sbjct: 277 -ARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAA 335

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           +     EG+ +    V   GL   +     +++L  + G + +A ++        N+++W
Sbjct: 336 NMTAFDEGRQIHATAVKH-GLDANVFVGSSLINLYVKHGCISDAKKVF-DFSTEKNIVMW 393

Query: 549 GALL 552
            A+L
Sbjct: 394 NAIL 397



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 129/265 (48%), Gaps = 11/265 (4%)

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSA-RTLFDGMKSKDVMIWNA-VISAYAQA 354
           LHA ILR G      + +ALVD+YG+   +  A R L     +       + V+S +A++
Sbjct: 75  LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPASSAAASSVLSCHARS 134

Query: 355 HCIDKAFELFIHMKVS-KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
                  + F  ++ S    P++  +  +LS C+  GALE G+ +H  + K G    V  
Sbjct: 135 GSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFC 194

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
           +  LVDMYAKCG+V+ A R+F      D   W +M+AGY   G  ++AL  F  ME+ G 
Sbjct: 195 QAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGS 254

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
            P+ +T + +++  +  G + + +++  ++      +     +  ++    ++GL  E  
Sbjct: 255 VPDQVTCVTIISTLASMGRLGDARTLLKRI-----RMTSTVAWNAVIASYSQSGLDSEVF 309

Query: 534 EMIKSMP---LRPNMIVWGALLAAS 555
            + K M    L P    + ++L+A+
Sbjct: 310 GLYKDMKKQGLMPTRSTFASILSAA 334


>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
 gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/599 (35%), Positives = 343/599 (57%), Gaps = 6/599 (1%)

Query: 26  KFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV 84
           +  +  I +P    +  ++  Y  N++    +  Y  MR    E DN     +LKAC++ 
Sbjct: 57  RLVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLKECDNVVFSHVLKACSES 116

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
                G+++H   +K G + D++V   L+ MY++CG +  +R +FDE  +R+V SWS+MI
Sbjct: 117 RNFDEGRKVHCQIVKFG-NPDSFVFTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMI 175

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
            GY +  L ++ L +   MR   I  +++ +  +V     +  +  GK +H  +++ C  
Sbjct: 176 AGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHGYLIK-CGI 234

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
           E LG  + TAL+D+Y+KCG +  A+ +F+ L+   +VSWT MI GY +     E ++LF 
Sbjct: 235 E-LGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFL 293

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           +  +  V P+++TI S+   C  +  L LG+ +H   ++ G    + + N+LVD Y KC+
Sbjct: 294 QKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIKLGSRDPI-VTNSLVDFYAKCQ 352

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
             R AR +F+ +  +DV+ WN++ISA++Q     +A ELF  M++  V P+ VT+V +LS
Sbjct: 353 MNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLS 412

Query: 385 LCTEAGALEMGKWLHTYIEKQGL-EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
            C    AL++G   H Y  K+GL   +V + TAL+  YAKCGD   A  +F     +   
Sbjct: 413 ACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDGMDQKSTV 472

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            W+AM++GYG+ G G  +L  F DM ++ +KPN   F  +L+ACSH G++ EG  +F  +
Sbjct: 473 TWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEGWRLFTMI 532

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
                LVP  +HY CMVDLL RAG L EA + I+ MP++P++ ++GA L    LH    +
Sbjct: 533 CQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCGLHSRFDL 592

Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
           GE+A  ++LE+ P +  Y VLM N+YA   RW+ V  VR +MK+  + K PG S +E++
Sbjct: 593 GELAIKRMLELHPGDACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTPGCSLMEMD 651



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 137/470 (29%), Positives = 237/470 (50%), Gaps = 7/470 (1%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           E+H + +  GL  D   S  L+ +Y   G L  AR +FD +P+ D +SW  +IR Y    
Sbjct: 23  EMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNS 82

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
              + +     MR        V    ++   ++  + D G+ +H  +V+    +     +
Sbjct: 83  EFRDIVGFYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFGNPDSF---V 139

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
            T L+DMY+KCG +  ++ +F+     +V SW+ MI+GY++ N   +G+ LF  M EE +
Sbjct: 140 FTGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELI 199

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
             ++IT+  L+  C  +G L  GKWLH Y+++ G E    +  AL+D+Y KC  +R AR+
Sbjct: 200 EANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARS 259

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +FD +   D++ W A+I  Y Q  C ++A +LF+  +   V PN+VT+  + S C++   
Sbjct: 260 VFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLN 319

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L +G+ +H    K G   D I+  +LVD YAKC     A  +F     RD+  WN++++ 
Sbjct: 320 LNLGRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISA 378

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           +  +G   EAL  F  M    V P+ +T + +L+AC+    +  G S F       GL+ 
Sbjct: 379 FSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACASLNALQVGSS-FHAYAVKRGLLS 437

Query: 512 KIEHYG-CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
              + G  ++    + G  + A  +   M  + + + W A+++   +  N
Sbjct: 438 SNVYVGTALLTFYAKCGDAESARVIFDGMD-QKSTVTWSAMISGYGIQGN 486


>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
          Length = 700

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/587 (33%), Positives = 337/587 (57%), Gaps = 8/587 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSE----VDNFTIPTILKACAQVLMTHLGKEIH 94
           +NS++  Y +      A  ++  M  +       V +FT+ T+LKAC  +  + +GK +H
Sbjct: 110 WNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVH 169

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           G+A+K G D D +VS + + MY +CG L  A   FD++ N+D+V+W+TMI GY +    E
Sbjct: 170 GYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEE 229

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIAT 213
           EA+E+  +M     +P++     ++     ++D  +G+  HA V++  C    + V +AT
Sbjct: 230 EAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCS---MDVFVAT 286

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMYSK  ++   ++ F  +++ ++VS+  +I+GY    +  E +R+++++  E + P
Sbjct: 287 ALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEP 346

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T + L   C     +  G  +H + ++ G +  +++ N++V+ Y KC    SA   F
Sbjct: 347 DSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAF 406

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + +   + + W  +IS +AQ    +KA   F  M+    + +E +   ++   +   A+E
Sbjct: 407 ESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVE 466

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            G+ LH ++ K GL+  + + +A++DMY+KCG V  A ++FS    +++  WN+M+ GY 
Sbjct: 467 QGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYA 526

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +G  +EAL+ F +M  SG+ P  +TF+G+L ACSHAGLV EG++ ++ MVH  G+ P +
Sbjct: 527 QNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSM 586

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EH  CMVDLLGRAG L+EA   + S        +WG+LL+A  +HKN  +G  AA   L 
Sbjct: 587 EHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCLF 646

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
           +EP        +SNIYA    W++V+ +R +MK++ V+KEPG S +E
Sbjct: 647 LEPHYSSSYTALSNIYASKELWSEVSRIRDLMKDMGVEKEPGCSWIE 693



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 266/529 (50%), Gaps = 16/529 (3%)

Query: 30  TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL 89
           TN++    R+ S +T   +      AL+ +  M + G E +  T    + ACAQ     L
Sbjct: 4   TNVV----RWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSL 59

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
              +H   +K G     +VS+ LI MYS+   +  AR+LFD+MP RD VSW++MI GY +
Sbjct: 60  ATSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQ 119

Query: 150 GGLPEEALEVMREM----RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
            GL EEA  +   M        +  S+  + +++     +    +GK +H   V+   D 
Sbjct: 120 RGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDS 179

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
            L V+ +T  + MY KCG L  A   F+++    +V+W  MI+GY +     E + LF +
Sbjct: 180 DLFVSGST--VYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQ 237

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M  E   P++ T   ++     +    +G+  HA +L+ G    + +A ALVDMY K  +
Sbjct: 238 MELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYD 297

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           I      F  M  ++++ +NA+I+ Y+     ++A  ++  ++   + P+  T VGL S 
Sbjct: 298 IEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSS 357

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR--DIC 443
           C+ +  +  G  +H +  K GL+ DV +  ++V+ Y+KCG  + A   F E+I R   +C
Sbjct: 358 CSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAF-ESINRPNSVC 416

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            W  +++G+  +G GE+AL+ F  M +   K +  +   ++ A S    V +G+ +   +
Sbjct: 417 -WAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHV 475

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           +   GL   I     ++D+  + G++++A ++   MP   N++ W +++
Sbjct: 476 MKS-GLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMP-EKNVVSWNSMI 522



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/426 (31%), Positives = 222/426 (52%), Gaps = 8/426 (1%)

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           M   +VV W++ I    R GL ++AL    +M    I P+ +   + +S  A      L 
Sbjct: 1   MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
            ++H  +++     +L V  ++ LI MYSK   +  A+ LF+ + +   VSW  MI+GY 
Sbjct: 61  TSLHCLILKKGFSNQLFV--SSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYS 118

Query: 252 RCNEINEGVRLFAEMIE--EN--VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           +     E   LF  MI   EN  +  S+ T+ +++  CG +G  ++GK +H Y ++ GF+
Sbjct: 119 QRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFD 178

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             L ++ + V MY KC  +  A   FD +++KD++ WN +I+ YAQ    ++A ELF  M
Sbjct: 179 SDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQM 238

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           ++   +PN+ T   +L   T      +G+  H  + K G  +DV + TALVDMY+K  D+
Sbjct: 239 ELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDI 298

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
               R F E   R++  +NA++ GY + G  EEAL  +  ++  G++P+  TF+GL ++C
Sbjct: 299 EDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSC 358

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           S +  V EG  V    V   GL   +     +V+   + G  D A E  +S+  RPN + 
Sbjct: 359 SVSSTVAEGAQVHVHSVK-FGLDSDVSVGNSIVNFYSKCGFTDSALEAFESIN-RPNSVC 416

Query: 548 WGALLA 553
           W  +++
Sbjct: 417 WAGIIS 422



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 168/317 (52%), Gaps = 4/317 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+L+T Y    K   AL +Y+ ++  G E D+FT   +  +C+       G ++H 
Sbjct: 313 LVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHV 372

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            ++K GLD D  V N+++  YS+CG   SA   F+ +   + V W+ +I G+ + G  E+
Sbjct: 373 HSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEK 432

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL    +MR    +  E +  S++   +  A V+ G+ +HA V+++  D    + + +A+
Sbjct: 433 ALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLD--CTIYVGSAV 490

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           IDMYSKCG +  A+++F+ + + +VVSW  MI+GY +     E + LF EM    + P+ 
Sbjct: 491 IDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTA 550

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSART-LF 333
           +T + ++  C   G ++ G+  +  ++ N G   S+     +VD+ G+   +  A   L 
Sbjct: 551 VTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLL 610

Query: 334 DGMKSKDVMIWNAVISA 350
               SK+  IW +++SA
Sbjct: 611 SSSFSKEPGIWGSLLSA 627



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 168/357 (47%), Gaps = 8/357 (2%)

Query: 237 QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
           + +VV WT  I+   R   +++ +  F +M+   + P+ IT  + I  C       L   
Sbjct: 3   ETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATS 62

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           LH  IL+ GF   L +++ L+ MY K   I+ AR LFD M  +D + WN++I+ Y+Q   
Sbjct: 63  LHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGL 122

Query: 357 IDKAFELFIHMKVS----KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
            ++A  LF  M  S    K+  ++ T+  +L  C   G   +GK +H Y  K G + D+ 
Sbjct: 123 NEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLF 182

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           +  + V MY KCG ++ A   F +   +DI  WN M+ GY  +   EEA+  F  ME  G
Sbjct: 183 VSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEG 242

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
            KPN  TF  +L A +       G+  F   V  LG    +     +VD+  +   +++ 
Sbjct: 243 FKPNDTTFCCVLKASTAMSDSAVGR-CFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDV 301

Query: 533 HEMIKSMPLRPNMIVWGALLAASKL--HKNPSMGEIAATQILEIEPQNYGYNVLMSN 587
                 M  R N++ + AL+    L      ++   +  Q   +EP ++ +  L S+
Sbjct: 302 ERAFGEMSKR-NLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSS 357


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 219/628 (34%), Positives = 361/628 (57%), Gaps = 14/628 (2%)

Query: 17  HAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALN----IYAFMRKNGSEVDNF 72
           H  I  +   F Y +  N  + +NS++++Y++  K   A+N    +++         D +
Sbjct: 67  HGDISLSRSTFDYIHKKNIFS-WNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFY 125

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           T P ILKAC  ++    GK++H    K G + D +V+ +L+ +YS  G L  A  +F +M
Sbjct: 126 TFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDM 182

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           P +DV SW+ MI G+ + G    AL V+  M+   ++   + + S++ + A   DV  G 
Sbjct: 183 PVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGV 242

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
            IH  V+++  D    V ++ ALI+MYSK G L  A+ +F+++    +VSW  +I+ Y +
Sbjct: 243 LIHLHVLKHGLDSD--VFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQ 300

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF-EFSLA 311
            N+ +  +R F  M    + P  +T++SL      +   ++ + +  +++R  + +  + 
Sbjct: 301 NNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVV 360

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           + NALV+MY K   +  A T+FD +  KD + WN +++ Y Q     +A + +  M+  +
Sbjct: 361 IGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECR 420

Query: 372 -VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
              PN+ T V ++   +  GAL+ G  +H  + K  L +DV + T L+D+Y KCG +  A
Sbjct: 421 DTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDA 480

Query: 431 YRLFSEAIYRDICM-WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
             LF E I RD  + WNA++A  G+HG GEEAL  F DM    VK + ITF+ LL+ACSH
Sbjct: 481 MSLFYE-IPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSH 539

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           +GLV EG+  FD M    G+ P ++HYGCMVDLLGRAG L++A+E++++MP++P+  +WG
Sbjct: 540 SGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWG 599

Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR 609
           ALL+A K++ N  +G +A+ ++LE++ +N GY VL+SNIYA   +W  V  VR + ++  
Sbjct: 600 ALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRG 659

Query: 610 VKKEPGFSSVEVNGLVHKFIRGGMVNWK 637
           ++K PG+SSV V      F  G   + K
Sbjct: 660 LRKTPGWSSVVVGSKAEVFYTGNQTHPK 687



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 251/488 (51%), Gaps = 16/488 (3%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +  +C  V  T   K++H   +  G   +  +S  LI +Y   G +  +R  FD +  ++
Sbjct: 28  LFNSCVNVNAT---KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKN 84

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFM----DIRPSEVAMISMVSLFADVADVDLGK 192
           + SW+++I  Y R G   EA+  + ++  M     +RP       ++     + D   GK
Sbjct: 85  IFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GK 141

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
            +H CV +   ++   V +A +L+ +YS+ G L  A ++F  +    V SW  MISG+ +
Sbjct: 142 KVHCCVFKMGFEDD--VFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQ 199

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
                  + +   M  E V    IT+ S++  C     +  G  +H ++L++G +  + +
Sbjct: 200 NGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFV 259

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
           +NAL++MY K   ++ A+ +FD M+ +D++ WN++I+AY Q +    A   F  M++  +
Sbjct: 260 SNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGI 319

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTY-IEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           RP+ +T+V L S+ ++     + + +  + I ++ L+ DV++  ALV+MYAK G +N A+
Sbjct: 320 RPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAH 379

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER-SGVKPNGITFIGLLNACSHA 490
            +F +   +D   WN ++ GY  +G   EA+  +  ME      PN  T++ ++ A SH 
Sbjct: 380 TVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHV 439

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           G + +G  +  K++    L   +    C++DL G+ G L++A  +   +P R   + W A
Sbjct: 440 GALQQGMKIHAKLIKN-SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP-RDTSVPWNA 497

Query: 551 LLAASKLH 558
           ++A+  +H
Sbjct: 498 IIASLGIH 505



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 143/276 (51%), Gaps = 17/276 (6%)

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ- 353
           K LHA +L  G   ++ ++  L+++Y    +I  +R+ FD +  K++  WN++ISAY + 
Sbjct: 39  KKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRF 98

Query: 354 ------AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
                  +C++   +LF       +RP+  T   +L  C    +L  GK +H  + K G 
Sbjct: 99  GKYHEAMNCVN---QLFSMCGGGHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMGF 152

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
           E DV +  +LV +Y++ G ++ A+++F +   +D+  WNAM++G+  +G    AL     
Sbjct: 153 EDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNR 212

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSV-FDKMVHGLGLVPKIEHYGCMVDLLGRA 526
           M+  GVK + IT   +L  C+ +  V  G  +    + HGL     +     ++++  + 
Sbjct: 213 MKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLD--SDVFVSNALINMYSKF 270

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
           G L +A  +   M +R +++ W +++AA + + +PS
Sbjct: 271 GRLQDAQMVFDQMEVR-DLVSWNSIIAAYEQNNDPS 305


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/579 (36%), Positives = 333/579 (57%), Gaps = 40/579 (6%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           K+IH   ++     D Y ++ L     +S   +L  AR +FD++P  ++ SW+ +IR   
Sbjct: 156 KQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNILIRALA 215

Query: 149 RGGLP-EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
               P +  L  +R +      P++     ++   A+     +GKA+H   ++    +  
Sbjct: 216 TSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDD- 274

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRL--NQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
            V +  +LI  Y+ CG+L  A  +F  +  N   +VSW  M++G+++    ++ + LF  
Sbjct: 275 -VFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFER 333

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M  E V P+ +T++S++  C     L LG+ +  YI RN    +L + NA +DM+ KC E
Sbjct: 334 MRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGE 393

Query: 326 IRSARTLFDGMKSKDVM-------------------------------IWNAVISAYAQA 354
           +  AR LFD M+ +DV+                                WN +IS Y Q+
Sbjct: 394 VEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQS 453

Query: 355 HCIDKAFELFIHMKVSK--VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
               +A  +F  ++++K   RP++VT++  LS C + GA+++G+W+H YI+K+ ++++  
Sbjct: 454 GRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRN 513

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           L T+L+DMY+K GDV  A  +F     +D+ +W+AM+AG  MHG GE A+  F+DM+ + 
Sbjct: 514 LATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQ 573

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
           VKPN +TF  LL ACSH+GLV EGK +FD+M    G+VPK +HY CMVD+LGRAG L+EA
Sbjct: 574 VKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEA 633

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVA 592
            + I+ MPL P+  VWGALL A  +H N  + E A +++LEIEP N+G  VL+SN+YA  
Sbjct: 634 LKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKT 693

Query: 593 NRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             W  V+ +R+ M++  +KKE G SS+E++G VH+FI G
Sbjct: 694 GDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEFIVG 732



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 239/467 (51%), Gaps = 41/467 (8%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN-FTIPTILKACAQVLM 86
           +  I  P L  +N L+ +   ++ P  ++ ++  M  +     N FT P ++KA A+   
Sbjct: 196 FDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRC 255

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFD--EMPNRDVVSWSTMI 144
             +GK +HG AIK     D +V N+LI  Y+ CG L  A  +F+  E  N+D+VSW++M+
Sbjct: 256 FLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMV 315

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
            G+ +GG P++AL++   MR   + P+ V M+S++S  A   ++ LG+ +   + RN  +
Sbjct: 316 TGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRN--E 373

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT-------------------- 244
             + + +  A IDM+ KCG +  A+ LF+ + +  VVSWT                    
Sbjct: 374 MMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFD 433

Query: 245 -----------VMISGYIRCNEINEGVRLFAE--MIEENVFPSEITILSLIIECGFVGGL 291
                      V+ISGY +     E + +F E  + +    P ++T+LS +  C  +G +
Sbjct: 434 SMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAM 493

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
            +G+W+H YI +   + +  +A +L+DMY K  ++  A  +F  + +KDV +W+A+I+  
Sbjct: 494 DIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGL 553

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK-QGLEVD 410
           A     + A ELF+ M+ ++V+PN VT   LL  C+ +G ++ GK L   +E+  G+   
Sbjct: 554 AMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPK 613

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
               + +VD+  + G +  A +      +     +W A++    +HG
Sbjct: 614 TKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHG 660



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 176/363 (48%), Gaps = 41/363 (11%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +NS+VT +++   P  AL+++  MR  G   +  T+ +++ ACA+ +   LG+++  
Sbjct: 308 IVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCD 367

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST------------- 142
           +  +N +  +  V NA I M+ +CG +  AR LFD M  RDVVSW+T             
Sbjct: 368 YIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGI 427

Query: 143 ------------------MIRGYHRGGLPEEALEVMREMRFMD--IRPSEVAMISMVSLF 182
                             +I GY + G P+EAL + RE++      RP +V ++S +S  
Sbjct: 428 ARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSAC 487

Query: 183 ADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVS 242
           A +  +D+G+ IH  + +  +  +L   +AT+LIDMYSK G++  A ++F+ +    V  
Sbjct: 488 AQLGAMDIGEWIHGYIKK--ERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFV 545

Query: 243 WTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYIL 302
           W+ MI+G          + LF +M E  V P+ +T  +L+  C   G +  GK L   + 
Sbjct: 546 WSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEME 605

Query: 303 R-NGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISAYAQAHCIDKA 360
           R  G        + +VD+ G+   +  A    +GM  +    +W A++ A     CI   
Sbjct: 606 RVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGAC----CIHGN 661

Query: 361 FEL 363
            EL
Sbjct: 662 LEL 664



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 115/470 (24%), Positives = 221/470 (47%), Gaps = 50/470 (10%)

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
           +LF         K IHA ++R  K      A        +S    L YA+++F+++ Q +
Sbjct: 144 ALFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPN 203

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENVF-PSEITILSLIIECGFVGGLQLGKWLH 298
           + SW ++I      ++  + V +F  M+ ++ F P++ T   LI          +GK +H
Sbjct: 204 LYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVH 263

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK--SKDVMIWNAVISAYAQAHC 356
              ++  F   + + N+L+  Y  C  +  A  +F+ ++  +KD++ WN++++ + Q   
Sbjct: 264 GMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGY 323

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
            DKA +LF  M+   V PN VTMV ++S C +   L +G+ +  YI++  + +++ +  A
Sbjct: 324 PDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNA 383

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYR-------------------------------DICMW 445
            +DM+ KCG+V  A  LF     R                               DI  W
Sbjct: 384 TIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAW 443

Query: 446 NAMMAGYGMHGCGEEALIFFVDME--RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
           N +++GY   G  +EAL  F +++  +SG +P+ +T +  L+AC+  G +  G     + 
Sbjct: 444 NVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIG-----EW 498

Query: 504 VHGLGLVPKIE----HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK 559
           +HG     +I+        ++D+  ++G +++A E+  S+  + ++ VW A++A   +H 
Sbjct: 499 IHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNK-DVFVWSAMIAGLAMH- 556

Query: 560 NPSMGEIAATQILEI-EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
               GE A    L++ E Q    +V  +N+    +    V   +R+  E+
Sbjct: 557 --GRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEM 604


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 202/592 (34%), Positives = 343/592 (57%), Gaps = 5/592 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++++++   K   AL+++  M++ G   + +T    L+         LG  IHG A+
Sbjct: 216 WNSIISAHVTEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAAL 275

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+    D YV+NALI MY++CG +  A  +F  M  RD VSW+T++ G  +  L  +AL 
Sbjct: 276 KSNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALN 335

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             R+M+    +P +V+++++++      ++  GK +HA  +RN  D  +   I   LIDM
Sbjct: 336 YFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNM--QIGNTLIDM 393

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-EGVRLFAEMIEENVFPSEIT 277
           Y+KC  + +    F  +++  ++SWT +I+GY + NE + E + LF ++  + +    + 
Sbjct: 394 YAKCCCVKHMGYAFECMHEKDLISWTTIIAGYAQ-NECHLEAINLFRKVQVKGMDVDPMM 452

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           I S++  C  +      + +H Y+ +      + + NA+V++YG+      AR  F+ ++
Sbjct: 453 IGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHRDYARRAFESIR 511

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           SKD++ W ++I+         +A ELF  +K + ++P+ + ++  LS      +L+ GK 
Sbjct: 512 SKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKE 571

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H ++ ++G  ++  + ++LVDMYA CG V  + ++F     RD+ +W +M+   GMHGC
Sbjct: 572 IHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGC 631

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G EA+  F  M    V P+ ITF+ LL ACSH+GL+ EGK  F+ M +G  L P  EHY 
Sbjct: 632 GNEAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYA 691

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLL R+  L+EA++ ++SMP++P+  VW ALL A  +H N  +GE+AA ++L+ + +
Sbjct: 692 CMVDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTK 751

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           N G   L+SNI+A   RWNDV  VR  MK   +KK PG S +EV+  +H F+
Sbjct: 752 NSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFM 803



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 164/574 (28%), Positives = 296/574 (51%), Gaps = 31/574 (5%)

Query: 10  LEQTRQCHAHIIKTHFK-FSYTNIIN---------------------PLTRYNSLVTSYI 47
           L Q +Q HA ++K+H   F  T +++                      +  +N+++ +++
Sbjct: 62  LPQGQQLHARLLKSHLSAFLATKLLHMYEKCGSLKDAVKVFDEMTERTIFTWNAMMGAFV 121

Query: 48  KNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAY 107
            + K   A+ +Y  MR  G  +D  T P++LKAC  +  + LG EIHG A+K G     +
Sbjct: 122 SSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFVF 181

Query: 108 VSNALIQMYSECGSLVSARYLFDE--MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
           V NALI MY +CG L  AR LFD   M   D VSW+++I  +   G   EAL + R M+ 
Sbjct: 182 VCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQE 241

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
           + +  +    ++ +    D + V LG  IH   +++  +    V +A ALI MY+KCG +
Sbjct: 242 VGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKS--NHFADVYVANALIAMYAKCGRM 299

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
             A+++F  +     VSW  ++SG ++     + +  F +M      P ++++L+LI   
Sbjct: 300 EDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAAS 359

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
           G  G L  GK +HAY +RNG + ++ + N L+DMY KC  ++     F+ M  KD++ W 
Sbjct: 360 GRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWT 419

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
            +I+ YAQ  C  +A  LF  ++V  +  + + +  +L  C+   +    + +H Y+ K+
Sbjct: 420 TIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKR 479

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
            L  D++L+ A+V++Y + G  + A R F     +DI  W +M+     +G   EAL  F
Sbjct: 480 DL-ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELF 538

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLG 524
             ++++ ++P+ I  I  L+A ++   + +GK +   ++  G  L   I     +VD+  
Sbjct: 539 YSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA--SSLVDMYA 596

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             G ++ + +M  S+  R ++I+W +++ A+ +H
Sbjct: 597 CCGTVENSRKMFHSVKQR-DLILWTSMINANGMH 629



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 193/379 (50%), Gaps = 10/379 (2%)

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
           ++ L   V  +  G+ +HA ++++     L   +AT L+ MY KCG+L  A ++F+ + +
Sbjct: 52  LLDLCVAVKALPQGQQLHARLLKS----HLSAFLATKLLHMYEKCGSLKDAVKVFDEMTE 107

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
            ++ +W  M+  ++   +  E + L+ EM    V     T  S++  CG +G  +LG  +
Sbjct: 108 RTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEI 167

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG--MKSKDVMIWNAVISAY-AQA 354
           H   ++ GF   + + NAL+ MYGKC ++  AR LFDG  M+ +D + WN++ISA+  + 
Sbjct: 168 HGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEG 227

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
            C++ A  LF  M+   V  N  T V  L    +   +++G  +H    K     DV + 
Sbjct: 228 KCLE-ALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVA 286

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
            AL+ MYAKCG +  A R+F+  + RD   WN +++G   +    +AL +F DM+ S  K
Sbjct: 287 NALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQK 346

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
           P+ ++ + L+ A   +G +  GK V    +   GL   ++    ++D+  +   +     
Sbjct: 347 PDQVSVLNLIAASGRSGNLLNGKEVHAYAIRN-GLDSNMQIGNTLIDMYAKCCCVKHMGY 405

Query: 535 MIKSMPLRPNMIVWGALLA 553
             + M    ++I W  ++A
Sbjct: 406 AFECMH-EKDLISWTTIIA 423



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 80/144 (55%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + S++T  + N  P  AL ++  +++   + D+  I + L A A +     GKEIHG
Sbjct: 515 IVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHG 574

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F I+ G   +  ++++L+ MY+ CG++ ++R +F  +  RD++ W++MI      G   E
Sbjct: 575 FLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNE 634

Query: 156 ALEVMREMRFMDIRPSEVAMISMV 179
           A+ + ++M   ++ P  +  ++++
Sbjct: 635 AIALFKKMTDENVIPDHITFLALL 658


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/537 (36%), Positives = 314/537 (58%), Gaps = 35/537 (6%)

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           +F+ +   +++ W+TM RG+        AL++   M  + + P+  +   ++   A    
Sbjct: 21  IFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKA 80

Query: 188 VDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL----------------AY---- 227
           +  G+ IH  V++   D  L + + T+LI MY++ G L                +Y    
Sbjct: 81  LIEGQQIHGHVLKLGYD--LDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALI 138

Query: 228 -----------AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
                      A++LF+ ++   VVSW  MISGY+      E + L+ +M++ NV P E 
Sbjct: 139 TGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDES 198

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T+++++  C   G ++LG+ LH++I  +GF  ++ + N L+D+Y KC E+ +A  LF G+
Sbjct: 199 TMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGL 258

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             KDV+ WN +I  +   +   +A  LF  M  S   PN+VTM+ +L  C   GA+++G+
Sbjct: 259 AKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGR 318

Query: 397 WLHTYIEK--QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           W+H YI K  +G+     L T+L+DMYAKCGD+  A ++F   + R +  WNAM+ G+ M
Sbjct: 319 WIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAM 378

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           HG    A   F  M ++G+ P+ ITF+GLL+ACSH+G++  G+ +F  M     + PK+E
Sbjct: 379 HGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLE 438

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HYGCM+DLLG  GL  EA EMI++MP+ P+ ++W +LL A K+H N  +GE  A  +++I
Sbjct: 439 HYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKI 498

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           EP+N G  VL+SNIYA A RW+ VA +R ++ +  +KK PG SS+E++ +VH+FI G
Sbjct: 499 EPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHEFIIG 555



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 148/503 (29%), Positives = 255/503 (50%), Gaps = 76/503 (15%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++   +  N+   +AL +Y  M   G   ++++ P +LK+CA+      G++IHG  +
Sbjct: 33  WNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVL 92

Query: 99  KNGLDGDAYVSNALIQMYSECGSLV-------------------------------SARY 127
           K G D D YV+ +LI MY++ G L                                +AR 
Sbjct: 93  KLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARK 152

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           LFDE+  +DVVSW+ MI GY      +EALE+ ++M   +++P E  M+++VS  A    
Sbjct: 153 LFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGS 212

Query: 188 VDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           ++LG+ +H+ +    +D   G  + I   LID+YSKCG +  A  LF  L +  V+SW  
Sbjct: 213 IELGRQLHSWI----EDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNT 268

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR-- 303
           +I G+   N   E + LF EM+     P+++T+LS++  C  +G + +G+W+H YI +  
Sbjct: 269 LIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRL 328

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
            G   + ++  +L+DMY KC +I +A+ +FD M ++ +  WNA+I  +A     + AF+L
Sbjct: 329 KGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDL 388

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT--ALVDMY 421
           F  M+ + + P+++T VGLLS C+ +G L++G+ +   +  Q  ++   L+    ++D+ 
Sbjct: 389 FSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMS-QDYKITPKLEHYGCMIDLL 447

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
             CG       LF EA                      + +I  + ME     P+G+ + 
Sbjct: 448 GHCG-------LFKEA----------------------KEMIRTMPME-----PDGVIWC 473

Query: 482 GLLNACSHAGLVTEGKSVFDKMV 504
            LL AC     V  G+S    ++
Sbjct: 474 SLLKACKMHNNVELGESYAQNLI 496



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 200/398 (50%), Gaps = 39/398 (9%)

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           L+YA  +F  + + +++ W  M  G+   ++    ++L+  MI   + P+  +   L+  
Sbjct: 15  LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY---GKCRE---------------- 325
           C     L  G+ +H ++L+ G++  + +  +L+ MY   G+  +                
Sbjct: 75  CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSY 134

Query: 326 ------------IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
                       I +AR LFD +  KDV+ WNA+IS Y +     +A EL+  M  + V+
Sbjct: 135 TALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           P+E TMV ++S C ++G++E+G+ LH++IE  G   ++ +   L+D+Y+KCG+V  A  L
Sbjct: 195 PDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGL 254

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F     +D+  WN ++ G+      +EAL+ F +M RSG  PN +T + +L AC+H G +
Sbjct: 255 FQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAI 314

Query: 494 TEGKSV---FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
             G+ +    +K + G+     +     ++D+  + G ++ A ++  SM  R ++  W A
Sbjct: 315 DIGRWIHVYINKRLKGVTNASSL--LTSLIDMYAKCGDIEAAKQVFDSMLTR-SLSSWNA 371

Query: 551 LLAASKLH--KNPSMGEIAATQILEIEPQNYGYNVLMS 586
           ++    +H   N +    +  +   I+P +  +  L+S
Sbjct: 372 MIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLS 409



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 172/320 (53%), Gaps = 2/320 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +N++++ Y++      AL +Y  M K   + D  T+ T++ ACAQ     LG++
Sbjct: 159 VKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQ 218

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H +   +G   +  + N LI +YS+CG + +A  LF  +  +DV+SW+T+I G+    L
Sbjct: 219 LHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIGGHTHMNL 278

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            +EAL + +EM      P++V M+S++   A +  +D+G+ IH  + +  K      ++ 
Sbjct: 279 YKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLL 338

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T+LIDMY+KCG++  AKQ+F+ +   S+ SW  MI G+    + N    LF++M +  + 
Sbjct: 339 TSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGID 398

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSART 331
           P +IT + L+  C   G L LG+ +   + ++      L     ++D+ G C   + A+ 
Sbjct: 399 PDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKE 458

Query: 332 LFDGMK-SKDVMIWNAVISA 350
           +   M    D +IW +++ A
Sbjct: 459 MIRTMPMEPDGVIWCSLLKA 478


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/573 (36%), Positives = 322/573 (56%), Gaps = 34/573 (5%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQ---MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           IH   IK GL    Y  + LI+   +      L  A  +F+ +   +++ W+TM RG+  
Sbjct: 21  IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 80

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
              P  AL +   M  + + P+      ++   A       G+ IH  V++   D  L V
Sbjct: 81  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 140

Query: 210 AIA-----------------------------TALIDMYSKCGNLAYAKQLFNRLNQNSV 240
             +                             TALI  Y+  G +A A+++F+ +    V
Sbjct: 141 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDV 200

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           VSW  MISGY       E + LF EM++ NV P E T++S++  C     ++LG+ +H++
Sbjct: 201 VSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSW 260

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           I  +GF  +L + NAL+D+Y KC E+ +A  LF+G+  KDV+ WN +I  Y   +   +A
Sbjct: 261 IDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 320

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK--QGLEVDVILKTALV 418
             LF  M  S   PN+VTM+ +L  C   GA+E+G+W+H YI K  +G+      +T+L+
Sbjct: 321 LLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLI 380

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           DMYAKCGD+  A ++F   + R +  WNAM+ G+ MHG    A   F  M ++ ++P+ I
Sbjct: 381 DMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDI 440

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           TF+GLL+ACSH+G++  G+ +F  M     + PK+EHYGCM+DLLG +GL  EA EMI +
Sbjct: 441 TFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINT 500

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDV 598
           M + P+ ++W +LL A K++ N  +GE  A  +++IEP+N G  VL+SNIYA A RWN+V
Sbjct: 501 MEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAGRWNEV 560

Query: 599 AGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           A +R ++ +  +KK PG SS+E++ +VH+FI G
Sbjct: 561 AKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 593



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 156/501 (31%), Positives = 258/501 (51%), Gaps = 72/501 (14%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++   +  ++ P SAL +Y  M   G   + +T P +LK+CA+      G++IHG  +
Sbjct: 71  WNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVL 130

Query: 99  KNGLDGDAYVSNALIQMYSECGSL-------------------------------VSARY 127
           K G D D YV  +LI MY + G L                                SA+ 
Sbjct: 131 KLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQK 190

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           +FDE+P +DVVSW+ MI GY   G  +EALE+ +EM   ++RP E  M+S+VS  A  A 
Sbjct: 191 MFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSAS 250

Query: 188 VDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           ++LG+ +H+ +     D   G  + I  ALID+Y KCG +  A  LF  L+   V+SW  
Sbjct: 251 IELGRQVHSWI----DDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNT 306

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR-- 303
           +I GY   N   E + LF EM+     P+++T+LS++  C  +G +++G+W+H YI +  
Sbjct: 307 LIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRL 366

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
            G   + +   +L+DMY KC +I +A+ +FD + ++ +  WNA+I  +A     + AF++
Sbjct: 367 KGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDI 426

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F  M+ +++ P+++T VGLLS C+ +G L++G+  H +   + ++ D  + T  ++ Y  
Sbjct: 427 FSRMRKNEIEPDDITFVGLLSACSHSGMLDLGR--HIF---RSMKEDYKI-TPKLEHYGC 480

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
             D+ G   LF EA                      E +I  ++ME     P+G+ +  L
Sbjct: 481 MIDLLGHSGLFKEA----------------------EEMINTMEME-----PDGVIWCSL 513

Query: 484 LNACSHAGLVTEGKSVFDKMV 504
           L AC     V  G+S    ++
Sbjct: 514 LKACKMYANVELGESYAQNLI 534



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 169/324 (52%), Gaps = 10/324 (3%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I  +  +N++++ Y +      AL ++  M K     D  T+ +++ ACAQ     LG++
Sbjct: 197 IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQ 256

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H +   +G   +  + NALI +Y +CG + +A  LF+ +  +DV+SW+T+I GY    L
Sbjct: 257 VHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 316

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            +EAL + +EM      P++V M+S++   A +  +++G+ IH  + +  K      +  
Sbjct: 317 YKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHR 376

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T+LIDMY+KCG++  A+Q+F+ +   S+ SW  MI G+      N    +F+ M +  + 
Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE 436

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE-----FSLAMANALVDMYGKCREIR 327
           P +IT + L+  C   G L LG+    +I R+  E       L     ++D+ G     +
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGR----HIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFK 492

Query: 328 SARTLFDGMK-SKDVMIWNAVISA 350
            A  + + M+   D +IW +++ A
Sbjct: 493 EAEEMINTMEMEPDGVIWCSLLKA 516



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 147/311 (47%), Gaps = 41/311 (13%)

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD---MYGKCREIRSARTLFDG 335
           LSL+  C  +  L++   +HA +++ G   +    + L++   +      +  A ++F+ 
Sbjct: 6   LSLLHNCKTLQSLRM---IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFET 62

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++  +++IWN +   +A +     A  L++ M    + PN  T   LL  C ++ A   G
Sbjct: 63  IQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREG 122

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR--------------- 440
           + +H ++ K G ++D+ + T+L+ MY + G +  A ++F ++ +R               
Sbjct: 123 QQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASK 182

Query: 441 ----------------DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
                           D+  WNAM++GY   G  +EAL  F +M ++ V+P+  T + ++
Sbjct: 183 GYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVV 242

Query: 485 NACSHAGLVTEGKSVFDKM-VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           +AC+ +  +  G+ V   +  HG G   KI     ++DL  + G ++ A  + + +  + 
Sbjct: 243 SACAQSASIELGRQVHSWIDDHGFGSNLKI--VNALIDLYIKCGEVETACGLFEGLSYK- 299

Query: 544 NMIVWGALLAA 554
           ++I W  L+  
Sbjct: 300 DVISWNTLIGG 310


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 204/592 (34%), Positives = 340/592 (57%), Gaps = 5/592 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++  Y K  +   +L ++  MR+     D + I ++L AC+ +     GK+IHG+ +
Sbjct: 223 WTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVL 282

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G D D  V N +I  Y +C  + + R LF+ + ++DVVSW+TMI G  +     +A++
Sbjct: 283 RRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMD 342

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALID 217
           +  EM     +P      S+++    +  +  G+ +HA  ++ N  ++     +   LID
Sbjct: 343 LFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDF---VKNGLID 399

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+KC +L  A+++F+ +   +VVS+  MI GY R +++ E + LF EM      P+ +T
Sbjct: 400 MYAKCDSLTNARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLT 459

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
            +SL+     +  L+L   +H  I++ G        +AL+D+Y KC  +  AR +F+ + 
Sbjct: 460 FVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIY 519

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +D+++WNA+ S Y+Q    +++ +L+  +++S+++PNE T   +++  +   +L  G+ 
Sbjct: 520 DRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQ 579

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
            H  + K GL+ D  +  +LVDMYAKCG +  +++ FS    RDI  WN+M++ Y  HG 
Sbjct: 580 FHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGD 639

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
             +AL  F  M   GVKPN +TF+GLL+ACSHAGL+  G   F+ M    G+ P I+HY 
Sbjct: 640 AAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESM-SKFGIEPGIDHYA 698

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMV LLGRAG + EA E +K MP++P  +VW +LL+A ++  +  +G  AA   +  +P 
Sbjct: 699 CMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVELGTYAAEMAISCDPA 758

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           + G  +L+SNI+A    W  V  VR  M   RV KEPG+S +EVN  VH+FI
Sbjct: 759 DSGSYILLSNIFASKGMWASVRMVREKMDMSRVVKEPGWSWIEVNNEVHRFI 810



 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 165/547 (30%), Positives = 296/547 (54%), Gaps = 8/547 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYA-FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           L  ++S+V+ Y ++     AL ++  FMR    + + + + ++++AC Q+       ++H
Sbjct: 118 LVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLH 177

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           GF +K G   D YV  +LI  Y++ G +  AR +FD +  +  V+W+ +I GY + G  E
Sbjct: 178 GFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSE 237

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
            +L++  +MR  D+ P    + S++S  + +  ++ GK IH  V+R   D  + V++   
Sbjct: 238 VSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFD--MDVSVVNG 295

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           +ID Y KC  +   ++LFNRL    VVSWT MI+G ++ +   + + LF EM+ +   P 
Sbjct: 296 IIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPD 355

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
                S++  CG +  LQ G+ +HAY ++   +    + N L+DMY KC  + +AR +FD
Sbjct: 356 AFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFD 415

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            + + +V+ +NA+I  Y++   + +A +LF  M++S   P  +T V LL L +    LE+
Sbjct: 416 LVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLEL 475

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
              +H  I K G+ +D    +AL+D+Y+KC  V  A  +F E   RDI +WNAM +GY  
Sbjct: 476 SSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQ 535

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKI 513
               EE+L  + D++ S +KPN  TF  ++ A S+   +  G+   ++++  GL   P +
Sbjct: 536 QLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFV 595

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG-EIAATQIL 572
            +   +VD+  + G ++E+H+   S   R ++  W ++++    H + +   E+    I+
Sbjct: 596 TN--SLVDMYAKCGSIEESHKAFSSTNQR-DIACWNSMISTYAQHGDAAKALEVFERMIM 652

Query: 573 EIEPQNY 579
           E    NY
Sbjct: 653 EGVKPNY 659



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 150/576 (26%), Positives = 286/576 (49%), Gaps = 19/576 (3%)

Query: 23  THFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNF-TIPTILKAC 81
           +HFKF   + ++    +++L+  +++ +     +      RK G E+     +P+     
Sbjct: 12  SHFKFLNKDNVSQTLHFSTLLPPFLQPHDSPILIQ-----RKIGRELGKLLQLPS----- 61

Query: 82  AQVLMTHLGKEIHGFAIKNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSW 140
             +L +H  K+IH   +  G    D ++ N L+  YS+      A+ LFD MP+R++V+W
Sbjct: 62  PNILTSHYYKKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTW 121

Query: 141 STMIRGYHRGGLPEEALEVM-REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           S+M+  Y + G   EAL +  R MR    +P+E  + S+V     + ++     +H  VV
Sbjct: 122 SSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVV 181

Query: 200 RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
           +    +   V + T+LID Y+K G +  A+ +F+ L   + V+WT +I+GY +       
Sbjct: 182 KGGFVQD--VYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVS 239

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
           ++LF +M E +V+P    I S++  C  +  L+ GK +H Y+LR GF+  +++ N ++D 
Sbjct: 240 LKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDF 299

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
           Y KC ++++ R LF+ +  KDV+ W  +I+   Q      A +LF+ M     +P+    
Sbjct: 300 YLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGC 359

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
             +L+ C    AL+ G+ +H Y  K  ++ D  +K  L+DMYAKC  +  A ++F     
Sbjct: 360 TSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAA 419

Query: 440 RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
            ++  +NAM+ GY       EAL  F +M  S   P  +TF+ LL   S   L+     +
Sbjct: 420 INVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQI 479

Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA--ASKL 557
              ++   G+         ++D+  +   + +A  + + +  R +++VW A+ +  + +L
Sbjct: 480 -HCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDR-DIVVWNAMFSGYSQQL 537

Query: 558 HKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVAN 593
               S+      Q+  ++P  + +  +++    +A+
Sbjct: 538 ENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIAS 573



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/490 (28%), Positives = 249/490 (50%), Gaps = 12/490 (2%)

Query: 19  HIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTIL 78
           H +KT  K     +   +  + +++   ++N+    A++++  M + G + D F   ++L
Sbjct: 304 HKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVRKGWKPDAFGCTSVL 363

Query: 79  KACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVV 138
            +C  +     G+++H +AIK  +D D +V N LI MY++C SL +AR +FD +   +VV
Sbjct: 364 NSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAAINVV 423

Query: 139 SWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACV 198
           S++ MI GY R     EAL++ REMR     P+ +  +S++ L + +  ++L   IH  +
Sbjct: 424 SYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLI 483

Query: 199 VRNCKDEKLGVAI----ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
           +      K GV++     +ALID+YSKC  +  A+ +F  +    +V W  M SGY +  
Sbjct: 484 I------KFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQL 537

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
           E  E ++L+ ++    + P+E T  ++I     +  L+ G+  H  +++ G +    + N
Sbjct: 538 ENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHGQQFHNQVIKMGLDDDPFVTN 597

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
           +LVDMY KC  I  +   F     +D+  WN++IS YAQ     KA E+F  M +  V+P
Sbjct: 598 SLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMISTYAQHGDAAKALEVFERMIMEGVKP 657

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           N VT VGLLS C+ AG L++G      + K G+E  +     +V +  + G +  A    
Sbjct: 658 NYVTFVGLLSACSHAGLLDLGFHHFESMSKFGIEPGIDHYACMVSLLGRAGKIYEAKEFV 717

Query: 435 SE-AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
            +  I     +W ++++   + G  E    +  +M  S    +  ++I L N  +  G+ 
Sbjct: 718 KKMPIKPAAVVWRSLLSACRVSGHVELG-TYAAEMAISCDPADSGSYILLSNIFASKGMW 776

Query: 494 TEGKSVFDKM 503
              + V +KM
Sbjct: 777 ASVRMVREKM 786


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 206/581 (35%), Positives = 344/581 (59%), Gaps = 8/581 (1%)

Query: 39  YNSLVTSYIKNNKPSSALN-IYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +NS+V++Y++  +   +++ +   +  +G   D +T P +LKAC   L    G+++H + 
Sbjct: 117 WNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKAC---LSLADGEKMHCWV 173

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K G + D YV+ +LI +YS  G++  A  +F +MP RDV SW+ MI G+ + G   EAL
Sbjct: 174 LKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAEAL 233

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            V+  M+  +++   V + SM+ + A   DV  G  +H  V+++  +    V ++ ALI+
Sbjct: 234 RVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESD--VFVSNALIN 291

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYSK G L  A+++F+ +    +VSW  +I+ Y + ++    +  F EM+   + P  +T
Sbjct: 292 MYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLT 351

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILR-NGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           ++SL    G +   ++G+ +H +++R    E  + + NALV+MY K   I  AR +F+ +
Sbjct: 352 VVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQL 411

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMG 395
            S+DV+ WN +I+ YAQ     +A + +  M+  + + PN+ T V +L   +  GAL+ G
Sbjct: 412 PSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQG 471

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H  + K  L +DV + T L+DMY KCG +  A  LF E        WNA+++  G+H
Sbjct: 472 MKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIISSLGIH 531

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G GE+AL  F DM   GVK + ITF+ LL+ACSH+GLV E +  FD M     + P ++H
Sbjct: 532 GHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKH 591

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           YGCMVDL GRAG L++A+ ++ +MP++ +  +WG LLAA ++H N  +G  A+ ++LE++
Sbjct: 592 YGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVD 651

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGF 616
            +N GY VL+SNIYA   +W     VR + ++  ++K PG+
Sbjct: 652 SENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGW 692



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 189/375 (50%), Gaps = 7/375 (1%)

Query: 181 LFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
           +F    ++++ K +HA ++   K +   V + T L+ +Y+  G+L+ +   F  + + ++
Sbjct: 57  VFRSCTNINVAKQLHALLLVLGKAQD--VVLLTQLVTLYATLGDLSLSSTTFKHIQRKNI 114

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIE-ENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
            SW  M+S Y+R     + +    E++    V P   T   ++  C     L  G+ +H 
Sbjct: 115 FSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKAC---LSLADGEKMHC 171

Query: 300 YILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
           ++L+ GFE  + +A +L+ +Y +   +  A  +F  M  +DV  WNA+IS + Q   + +
Sbjct: 172 WVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFCQNGNVAE 231

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVD 419
           A  +   MK  +V+ + VT+  +L +C ++  +  G  +H Y+ K GLE DV +  AL++
Sbjct: 232 ALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALIN 291

Query: 420 MYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGIT 479
           MY+K G +  A R+F     RD+  WN+++A Y  +     AL FF +M   G++P+ +T
Sbjct: 292 MYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLT 351

Query: 480 FIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM 539
            + L +          G++V   +V    L   I     +V++  + G +D A  + + +
Sbjct: 352 VVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQL 411

Query: 540 PLRPNMIVWGALLAA 554
           P R ++I W  L+  
Sbjct: 412 PSR-DVISWNTLITG 425



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 107/212 (50%), Gaps = 12/212 (5%)

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           + + K LH  +   G   DV+L T LV +YA  GD++ +   F     ++I  WN+M++ 
Sbjct: 64  INVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSA 123

Query: 452 YGMHGCGEEALIFFVD-MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           Y   G   +++    + +  SGV+P+  TF  +L AC     + +G+ +    V  +G  
Sbjct: 124 YVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLS---LADGEKMH-CWVLKMGFE 179

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
             +     ++ L  R G ++ AH++   MP+R ++  W A++  S   +N ++ E  A +
Sbjct: 180 HDVYVAASLIHLYSRFGAVEVAHKVFVDMPVR-DVGSWNAMI--SGFCQNGNVAE--ALR 234

Query: 571 ILE-IEPQNYGYN-VLMSNIYAVANRWNDVAG 600
           +L+ ++ +    + V +S++  +  + NDV G
Sbjct: 235 VLDRMKTEEVKMDTVTVSSMLPICAQSNDVVG 266


>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Cucumis sativus]
          Length = 603

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 204/563 (36%), Positives = 325/563 (57%), Gaps = 14/563 (2%)

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF-DEMPNRD 136
           L++CA     + GK++H   I  G         +LI MYS+CG +  A  +F D    R+
Sbjct: 18  LQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERN 77

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           V +++ +I G+   GL  +  +  ++MR   + P +     +V    +V +V   K IH 
Sbjct: 78  VFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKIHG 134

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
           C+++     +L V + +AL++ Y K G++  A+++F  L+   VV W  MI+GY +   +
Sbjct: 135 CLLK--MGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCL 192

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
           +E + +F  M  + V PS  TI  ++      G L  GK +H  +++ G++  ++++NAL
Sbjct: 193 DEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNAL 252

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           +DMYGKC+ I  A  +F+ +  KD+  WN++IS + Q    D    LF  M  S + P+ 
Sbjct: 253 IDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDL 312

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD--------VILKTALVDMYAKCGDVN 428
           VT+  +L  C+   AL  G+ +H Y+   GL  D        +++  A++DMYAKCG +N
Sbjct: 313 VTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMN 372

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A ++F     +D+  WN M+ GYGMHG   EAL  F  M  +  KPN +T +G+L+AC+
Sbjct: 373 NALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACN 432

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           HAG V+ G+    +M    G++P IEHY C++D+LGRAG L++A+E+++ MP++ N +VW
Sbjct: 433 HAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVW 492

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
            ALL A +LH N  + EIAA Q+L++EP++ G  VLMSN+Y V  R+ +V  VR+ MKE 
Sbjct: 493 RALLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQ 552

Query: 609 RVKKEPGFSSVEVNGLVHKFIRG 631
            VKK PG S +E+   VH F  G
Sbjct: 553 NVKKTPGCSWIELKDGVHVFRTG 575



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/435 (32%), Positives = 236/435 (54%), Gaps = 15/435 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN++++ ++ N   S     Y  MR  G   D +T P +++ C +V+     K+IHG  +
Sbjct: 81  YNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKIHGCLL 137

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+ D +V +AL+  Y + GS+  A+ +F E+  RDVV W+ MI GY + G  +EALE
Sbjct: 138 KMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDEALE 197

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V R M    + PS   +  ++S+FA   D+D GK +H  V++   D   GV+++ ALIDM
Sbjct: 198 VFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDS--GVSVSNALIDM 255

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC ++  A  +F  +N+  + SW  +IS + +C + +  +RLF +M+   + P  +TI
Sbjct: 256 YGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTI 315

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEF--------SLAMANALVDMYGKCREIRSAR 330
            +++  C  +  L  G+ +H Y++ NG           +L ++NA++DMY KC  + +A 
Sbjct: 316 TTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNAL 375

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +FD M  KDV  WN +I  Y       +A  +F  M  ++ +PNEVT+VG+LS C  AG
Sbjct: 376 KIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAG 435

Query: 391 ALEMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAM 448
            +  G+     +E   G+   +   T ++DM  + G +  AY +  +  I  +  +W A+
Sbjct: 436 FVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRAL 495

Query: 449 MAGYGMHGCGEEALI 463
           +    +HG  E A I
Sbjct: 496 LGACRLHGNAELAEI 510



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 161/326 (49%), Gaps = 8/326 (2%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I  +  +N+++  Y K      AL ++  M   G     FTI  IL   A       GK 
Sbjct: 173 IRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKT 232

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HG  +K G D    VSNALI MY +C  +  A  +F+ +  +D+ SW+++I  + + G 
Sbjct: 233 VHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGD 292

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVA 210
            +  L +  +M    I P  V + +++   + +A +  G+ IH  ++ N   KD++ G  
Sbjct: 293 HDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAV 352

Query: 211 ----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
               ++ A++DMY+KCG++  A ++F+ +++  V SW +MI GY       E + +F++M
Sbjct: 353 DNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQM 412

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCRE 325
            E    P+E+T++ ++  C   G +  G+   A +    G   ++     ++DM G+   
Sbjct: 413 CEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGH 472

Query: 326 IRSARTLFDGMK-SKDVMIWNAVISA 350
           +  A  +   M    + ++W A++ A
Sbjct: 473 LEDAYEIVQKMPIQANPVVWRALLGA 498



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 143/276 (51%), Gaps = 6/276 (2%)

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF-DGMK 337
           ++ +  C     L  GK LH+ ++  GF  S     +L++MY KC ++  A  +F D   
Sbjct: 15  VAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCH 74

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            ++V  +NA+IS +       K F+ +  M++  V P++ T   ++  C E   +E+ K 
Sbjct: 75  ERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCE--VMEVKK- 131

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H  + K GLE+DV + +ALV+ Y K G +  A ++F E   RD+ +WNAM+ GY   GC
Sbjct: 132 IHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGC 191

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            +EAL  F  M   GV P+  T  G+L+  +  G +  GK+V   +V  +G    +    
Sbjct: 192 LDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHG-IVMKMGYDSGVSVSN 250

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            ++D+ G+   + +A  +I  M    ++  W ++++
Sbjct: 251 ALIDMYGKCKHIGDA-LIIFEMINEKDIFSWNSIIS 285



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 87/183 (47%), Gaps = 14/183 (7%)

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           N    V  L  C +   L  GK LH+ +   G        T+L++MY+KCG +  A  +F
Sbjct: 10  NVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF 69

Query: 435 SEAIY-RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
            +  + R++  +NA+++G+  +G   +   F+  M   GV P+  TF  ++  C     V
Sbjct: 70  YDPCHERNVFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV 129

Query: 494 TEGKSVFDKMVHG----LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
                   K +HG    +GL   +     +V+   + G +++A ++   + +R ++++W 
Sbjct: 130 --------KKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIR-DVVLWN 180

Query: 550 ALL 552
           A++
Sbjct: 181 AMI 183


>gi|357143265|ref|XP_003572861.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Brachypodium distachyon]
          Length = 697

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 205/606 (33%), Positives = 348/606 (57%), Gaps = 9/606 (1%)

Query: 29  YTNIINPLTRY-NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  I  P  R  N+L+ ++++  +   AL +   +R      D FT+  +LKACA +   
Sbjct: 59  FDEIPVPTPRLANALLRAHVRARQWCDALLLIPCLRVRP---DAFTLSLLLKACAMLPAL 115

Query: 88  HLGKEIHGFAIKNGLD-GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
             G+ +H  AI++     DA+V+ AL+ MY++C  +V +   ++     D+V  ++M+ G
Sbjct: 116 AHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTG 175

Query: 147 YHRGGLPEEALEVM-REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           Y +  +  EALE   R +      PS V ++S++S  A + DV  G+A HA V+RN  + 
Sbjct: 176 YEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRN--NF 233

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           +  + +  A++  Y + G +  A++LF  + +  VV+W+ M++GY++  +I E +  + +
Sbjct: 234 EYDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKK 293

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M+E  + P+ +T++S++  C     ++ G+ +H   ++ G E  + +A ALVDMY KC  
Sbjct: 294 MVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSC 353

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
              A  LF  M  KD + W  VIS + Q    D++  +F  M      P+ VTMV +L+ 
Sbjct: 354 HEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAA 413

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
           C+E+G +     LH Y+   G    + +  ALVD+Y+KCG++  A R+F  A+ +D+ +W
Sbjct: 414 CSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLW 473

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           ++M++GYG+HG G++A+  F  M  S VKPN +TF+ +L+ACSH+GLV EGK +F+ M  
Sbjct: 474 SSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQ 533

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
             G+VP   H+  MVDLLGRAG L EA +++     R +   W ALLAA + H +  M E
Sbjct: 534 VYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNG-RADAHTWCALLAACRAHHDTEMSE 592

Query: 566 IAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLV 625
           + A ++L+++P + GY  L++NIY     W+     R ++++  + K PG S+VE+N ++
Sbjct: 593 VVAAKLLKLDPDHAGYYNLLNNIYTFDENWSSAKENRNIIRDRGLNKVPGCSAVELNNVM 652

Query: 626 HKFIRG 631
           H F  G
Sbjct: 653 HTFTAG 658



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 191/397 (48%), Gaps = 31/397 (7%)

Query: 14  RQCHAHIIKTHFKFSYTNIINPL-------------------------TRYNSLVTSYIK 48
           + CHA +I+ +F++    ++N +                           ++ +VT Y++
Sbjct: 222 QACHAFVIRNNFEYDLV-LVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQ 280

Query: 49  NNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYV 108
           +     AL  Y  M + G + +  T+ ++++AC+       G+ +H  A+K G + +  V
Sbjct: 281 SGDICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTV 340

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI 168
           + AL+ MY +C     A  LF  M  +D V+W+ +I G+ + GLP+E++ V + M F   
Sbjct: 341 ATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGP 400

Query: 169 RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYA 228
            P  V M+ +++  ++   +     +H  +V     +K  + +A AL+D+YSKCGNL  A
Sbjct: 401 FPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDK--IFVAAALVDLYSKCGNLGCA 458

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
            ++F    +  VV W+ MISGY       + V LF  M+  +V P+ +T +S++  C   
Sbjct: 459 VRVFESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHS 518

Query: 289 GGLQLGKWLHAYILR-NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
           G +Q GK +   + +  G   +    +A+VD+ G+  E++ A  L  G    D   W A+
Sbjct: 519 GLVQEGKRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNGRADAHTWCAL 578

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
           ++A    H  D      +  K+ K+ P+      LL+
Sbjct: 579 LAACRAHH--DTEMSEVVAAKLLKLDPDHAGYYNLLN 613


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 204/577 (35%), Positives = 337/577 (58%), Gaps = 9/577 (1%)

Query: 58   IYAFMRKNGSEVD--NFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQM 115
            I  F+  NG  +D    T+  +L A A      LGK++HG A+K+GLD D  V+N+L+ M
Sbjct: 889  IECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNM 948

Query: 116  YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAM 175
            YS+ G    AR +F++M + D++SW++MI    +  L EE++ +  ++    ++P    +
Sbjct: 949  YSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTL 1008

Query: 176  ISMVSLFADVAD-VDLGKAIHACVVR--NCKDEKLGVAIATALIDMYSKCGNLAYAKQLF 232
             S++   + + D +++ + IH   ++  N  D      +AT LID+YSK G +  A+ LF
Sbjct: 1009 ASVLRACSSLIDGLNISRQIHVHALKTGNIADS----FVATTLIDVYSKSGKMEEAEFLF 1064

Query: 233  NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
               +   +  W  M+ GYI  N+  + + LF+ + +      +IT+ +    CG +  L 
Sbjct: 1065 QNKDDLDLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLD 1124

Query: 293  LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
             GK +HA+ ++ GF+  L + + ++DMY KC ++ +A  +F+ + + D + W ++IS   
Sbjct: 1125 QGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCV 1184

Query: 353  QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
                 D+A  ++  M+ S+V P+E T   L+   +   ALE G+ LH  + K     D  
Sbjct: 1185 DNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPF 1244

Query: 413  LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
            + T+LVDMYAKCG++  AYRLF +   R+I +WNAM+ G   HG  EEA+  F  M+  G
Sbjct: 1245 VGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHG 1304

Query: 473  VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
            ++P+ ++FIG+L+ACSHAGL +E       M +  G+ P+IEHY C+VD LGRAGL+ EA
Sbjct: 1305 IEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEA 1364

Query: 533  HEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVA 592
             ++I++MP + +  +  ALL A ++  +   G+  A ++  +EP +    VL+SNIYA A
Sbjct: 1365 DKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAA 1424

Query: 593  NRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            NRW+DV   R++MK   VKK+PGFS ++V  ++H F+
Sbjct: 1425 NRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFV 1461



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 135/484 (27%), Positives = 234/484 (48%), Gaps = 41/484 (8%)

Query: 36   LTRYNSLVTSYI-----KNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
            L  +N+++ +Y       +      L+++  +R +       T+  +LK C         
Sbjct: 687  LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746

Query: 91   KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
            + +HG+AIK GL+ D +VS AL+ +YS+CG +  AR LFD M  RDVV W+ M++GY + 
Sbjct: 747  EGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQL 806

Query: 151  GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
            GL +EA ++  E     +RP E ++  +++  ++V + D GK +   V            
Sbjct: 807  GLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEV-NWDEGKWLADQVQ----------- 854

Query: 211  IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
                           AYA +L    +   V  W   +S  +   +    +  F  M   N
Sbjct: 855  ---------------AYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLN 899

Query: 271  VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
            +    +T+L ++        L+LGK +H   +++G +  +++AN+LV+MY K      AR
Sbjct: 900  IDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAR 959

Query: 331  TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE-A 389
             +F+ MK  D++ WN++IS+ AQ+   +++  LFI +    ++P+  T+  +L  C+   
Sbjct: 960  EVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLI 1019

Query: 390  GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
              L + + +H +  K G   D  + T L+D+Y+K G +  A  LF      D+  WNAMM
Sbjct: 1020 DGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMM 1079

Query: 450  AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV--------FD 501
             GY +   G++AL  F  + +SG K + IT      AC    L+ +GK +        FD
Sbjct: 1080 FGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFD 1139

Query: 502  KMVH 505
              +H
Sbjct: 1140 SDLH 1143



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 228/476 (47%), Gaps = 47/476 (9%)

Query: 89   LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY- 147
            LGK  H   + +G  GD ++SN L+ MYS+CGSL SAR +FD  P RD+V+W+ ++  Y 
Sbjct: 639  LGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYA 698

Query: 148  ----HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
                   G  +E L + R +R      + + +  ++ L  +   +   + +H   +    
Sbjct: 699  ASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAI---- 754

Query: 204  DEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
              K+G    V ++ AL+++YSKCG +  A+ LF+ + +  VV W +M+ GY++     E 
Sbjct: 755  --KIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEA 812

Query: 260  VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
             +LF+E     + P E ++  LI+          GKWL   +     + SL+  N     
Sbjct: 813  FQLFSEFHRSGLRPDEFSV-QLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNP---- 867

Query: 320  YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
                                DV  WN  +S    A     A E F++M    +  + VT+
Sbjct: 868  --------------------DVFCWNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTL 907

Query: 380  VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
            + +L+       LE+GK +H    K GL+ DV +  +LV+MY+K G    A  +F++  +
Sbjct: 908  LVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKH 967

Query: 440  RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
             D+  WN+M++        EE++  F+D+   G+KP+  T   +L ACS    + +G ++
Sbjct: 968  LDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSS---LIDGLNI 1024

Query: 500  FDKM-VHGL--GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
              ++ VH L  G +        ++D+  ++G ++EA  + ++     ++  W A++
Sbjct: 1025 SRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKD-DLDLACWNAMM 1079



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 176/356 (49%), Gaps = 29/356 (8%)

Query: 10   LEQTRQCHAHIIKT---HFKFSYTNIINPLTR---------------------YNSLVTS 45
            L  +RQ H H +KT      F  T +I+  ++                     +N+++  
Sbjct: 1022 LNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFG 1081

Query: 46   YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
            YI  N    AL +++ + K+G + D  T+ T  KAC  +++   GK+IH  AIK G D D
Sbjct: 1082 YIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSD 1141

Query: 106  AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
             +V++ ++ MY +CG +V+A  +F+ +   D V+W++MI G    G  ++AL +   MR 
Sbjct: 1142 LHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQ 1201

Query: 166  MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALIDMYSKCGN 224
              + P E    +++   + V  ++ G+ +HA V++ +C  +     + T+L+DMY+KCGN
Sbjct: 1202 SRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPF---VGTSLVDMYAKCGN 1258

Query: 225  LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
            +  A +LF ++N  ++  W  M+ G  +     E V LF  M    + P  ++ + ++  
Sbjct: 1259 IEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSA 1318

Query: 285  CGFVG-GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
            C   G   +  ++LH+     G E  +   + LVD  G+   ++ A  + + M  K
Sbjct: 1319 CSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFK 1374



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 117/220 (53%), Gaps = 10/220 (4%)

Query: 291 LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
           L LGK  HA I+ +G      ++N L+ MY KC  + SAR +FD    +D++ WNA++ A
Sbjct: 637 LLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGA 696

Query: 351 YAQAHCID-------KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           YA +  +D       +   LF  ++ S      +T+  +L LC  +G L   + +H Y  
Sbjct: 697 YAAS--VDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAI 754

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
           K GLE DV +  ALV++Y+KCG +  A  LF     RD+ +WN M+ GY   G  +EA  
Sbjct: 755 KIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQ 814

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            F +  RSG++P+  +   +LN  S      EGK + D++
Sbjct: 815 LFSEFHRSGLRPDEFSVQLILNGVSEVNW-DEGKWLADQV 853



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 7/176 (3%)

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           LL        L +GK  H  I   G   D  L   L+ MY+KCG ++ A ++F     RD
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686

Query: 442 ICMWNAMMAGYGM-----HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
           +  WNA++  Y        G  +E L  F  +  S      +T   +L  C ++G +   
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAA 746

Query: 497 KSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           + V    +  +GL   +   G +V++  + G + +A  +   M  R ++++W  +L
Sbjct: 747 EGVHGYAIK-IGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRER-DVVLWNMML 800


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 217/591 (36%), Positives = 339/591 (57%), Gaps = 4/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++SY  + K    L ++  M   G   +++TI + L AC       LGKEIH   +
Sbjct: 252 WNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVL 311

Query: 99  KNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           K+     + YV NALI MY+ CG +  A  +  +M N DVV+W+++I+GY +  + +EAL
Sbjct: 312 KSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEAL 371

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           E   +M     +  EV+M S+++    ++++  G  +HA V+++  D  L V     LID
Sbjct: 372 EFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG--NTLID 429

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYSKC    Y  + F R++   ++SWT +I+GY + +   E + LF ++ ++ +   E+ 
Sbjct: 430 MYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMI 489

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           + S++     +  + + K +H +ILR G      + N LVD+YGKCR +  A  +F+ +K
Sbjct: 490 LGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIK 548

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KDV+ W ++IS+ A      +A ELF  M  + +  + V ++ +LS      AL  G+ 
Sbjct: 549 GKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGRE 608

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H Y+ ++G  ++  +  A+VDMYA CGD+  A  +F     + +  + +M+  YGMHGC
Sbjct: 609 IHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGC 668

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G+ A+  F  M    V P+ I+F+ LL ACSHAGL+ EG+     M H   L P  EHY 
Sbjct: 669 GKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV 728

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           C+VD+LGRA  + EA E +K M   P   VW ALLAA + H    +GEIAA ++LE+EP+
Sbjct: 729 CLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPK 788

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           N G  VL+SN++A   RWNDV  VR  MK   ++K PG S +E++G VHKF
Sbjct: 789 NPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKF 839



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 259/546 (47%), Gaps = 30/546 (5%)

Query: 35  PLTRYNSLVTSYIKNNKPSSALNIY------AFMR----KNGSEVDNFTIPTILKACAQV 84
           P  R N    S      PS  L  +      AF R    +N S V+ F    +L+ C + 
Sbjct: 36  PSCRRNPFRQSNQPVQVPSPKLACFDGVLTEAFQRLDVSENNSPVEAFAY--VLELCGKR 93

Query: 85  LMTHLGKEIHGFAIKN--GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
                G+++H    K     + D +++  L+ MY +CGSL  A  +FDEMP+R   +W+T
Sbjct: 94  RAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNT 152

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           MI  Y   G P  AL +   MR   +     +  +++   A + D+  G  +H+ +V   
Sbjct: 153 MIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLV--- 209

Query: 203 KDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQN-SVVSWTVMISGYIRCNEIN 257
              KLG      I  AL+ MY+K  +L+ A++LF+   +    V W  ++S Y    +  
Sbjct: 210 ---KLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSL 266

Query: 258 EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS-LAMANAL 316
           E + LF EM      P+  TI+S +  C      +LGK +HA +L++    S L + NAL
Sbjct: 267 ETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNAL 326

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           + MY +C ++  A  +   M + DV+ WN++I  Y Q     +A E F  M  +  + +E
Sbjct: 327 IAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDE 386

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           V+M  +++       L  G  LH Y+ K G + ++ +   L+DMY+KC       R F  
Sbjct: 387 VSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLR 446

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
              +D+  W  ++AGY  + C  EAL  F D+ +  ++ + +    +L A S    +   
Sbjct: 447 MHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIV 506

Query: 497 KSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
           K +   ++    L   I++   +VD+ G+   +  A  + +S+  + +++ W +++++S 
Sbjct: 507 KEIHCHILRKGLLDTVIQNE--LVDVYGKCRNMGYATRVFESIKGK-DVVSWTSMISSSA 563

Query: 557 LHKNPS 562
           L+ N S
Sbjct: 564 LNGNES 569



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 165/321 (51%), Gaps = 13/321 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + +++  Y +N+    AL ++  + K   E+D   + +IL+A + +    + KEIH 
Sbjct: 452 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             ++ GL  D  + N L+ +Y +C ++  A  +F+ +  +DVVSW++MI      G   E
Sbjct: 512 HILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+E+ R M    +    VA++ ++S  A ++ ++ G+ IH  ++R  K   L  +IA A+
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLR--KGFCLEGSIAVAV 628

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+ CG+L  AK +F+R+ +  ++ +T MI+ Y         V LF +M  ENV P  
Sbjct: 629 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDH 688

Query: 276 ITILSLIIECGFVGGLQLGKWL-----HAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           I+ L+L+  C   G L  G+       H Y L    E  +     LVDM G+   +  A 
Sbjct: 689 ISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV----CLVDMLGRANCVVEAF 744

Query: 331 TLFDGMKSKDVM-IWNAVISA 350
                MK++    +W A+++A
Sbjct: 745 EFVKMMKTEPTAEVWCALLAA 765


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/573 (36%), Positives = 311/573 (54%), Gaps = 16/573 (2%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF 129
           D   +  +++  A+      GK++H   I  G     +++N L+ MYS+CG L  A  LF
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           D MP R++VSW+ MI G  +     EA+     MR     P++ A  S +   A +  ++
Sbjct: 64  DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123

Query: 190 LGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           +GK +H      C   K G+     + + L DMYSKCG +  A ++F  +     VSWT 
Sbjct: 124 MGKQMH------CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTA 177

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
           MI GY +  E  E +  F +MI+E V   +  + S +  CG +   + G+ +H+ +++ G
Sbjct: 178 MIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLG 237

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKS--KDVMIWNAVISAYAQAHCIDKAFEL 363
           FE  + + NAL DMY K  ++ SA  +F G+ S  ++V+ +  +I  Y +   I+K   +
Sbjct: 238 FESDIFVGNALTDMYSKAGDMESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSV 296

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F+ ++   + PNE T   L+  C    ALE G  LH  + K   + D  + + LVDMY K
Sbjct: 297 FVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGK 356

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
           CG +  A + F E        WN++++ +G HG G++A+  F  M   GVKPN ITFI L
Sbjct: 357 CGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISL 416

Query: 484 LNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           L  CSHAGLV EG   F  M    G+VP  EHY C++DLLGRAG L EA E I  MP  P
Sbjct: 417 LTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEP 476

Query: 544 NMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRR 603
           N   W + L A ++H +  MG++AA +++++EP+N G  VL+SNIYA   +W DV  VR 
Sbjct: 477 NAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRM 536

Query: 604 VMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNW 636
            M++  VKK PG+S V+V    H F   G  +W
Sbjct: 537 RMRDGNVKKLPGYSWVDVGYKTHVF---GAEDW 566



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 221/428 (51%), Gaps = 13/428 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + ++++   +N+K S A+  +  MR  G     F   + ++ACA +    +GK++H 
Sbjct: 71  LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+K G+  + +V + L  MYS+CG++  A  +F+EMP +D VSW+ MI GY + G  EE
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAI 211
           AL   ++M   ++   +  + S +     +     G+++H+ VV      KLG    + +
Sbjct: 191 ALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVV------KLGFESDIFV 244

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQ-NSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
             AL DMYSK G++  A  +F   ++  +VVS+T +I GY+   +I +G+ +F E+  + 
Sbjct: 245 GNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG 304

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + P+E T  SLI  C     L+ G  LHA +++  F+    +++ LVDMYGKC  +  A 
Sbjct: 305 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAI 364

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
             FD +     + WN+++S + Q      A ++F  M    V+PN +T + LL+ C+ AG
Sbjct: 365 QAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAG 424

Query: 391 ALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM-WNAM 448
            +E G  + ++  +  G+       + ++D+  + G +  A    +   +      W + 
Sbjct: 425 LVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSF 484

Query: 449 MAGYGMHG 456
           +    +HG
Sbjct: 485 LGACRIHG 492


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 214/592 (36%), Positives = 331/592 (55%), Gaps = 8/592 (1%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           +++ Y +N + + A+ +Y  M ++G   D  T  +I+KAC       LG+++HG  IK+G
Sbjct: 229 MISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSG 288

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
            D      NALI MY+  G +V A  +F  +  +D++SW++MI G+ + G   EAL + R
Sbjct: 289 YDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFR 348

Query: 162 EM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--VAIATALIDM 218
           +M R    +P+E    S+ S    + + + G+ IH      C    LG  V    +L DM
Sbjct: 349 DMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGM----CAKFGLGRNVFAGCSLCDM 404

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G L  A + F ++    +VSW  +I+ +    ++NE +  F +M+   + P  IT 
Sbjct: 405 YAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITF 464

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF-DGMK 337
           LSL+  CG    +  G  +H+YI++ G +   A+ N+L+ MY KC  +  A  +F D  +
Sbjct: 465 LSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSE 524

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           + +++ WNA++SA  Q     + F LF  M  S+ +P+ +T+  +L  C E  +LE+G  
Sbjct: 525 NANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQ 584

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H +  K GL VDV +   L+DMYAKCG +  A  +F      DI  W++++ GY   G 
Sbjct: 585 VHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGL 644

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G EAL  F  M+  GV+PN +T++G+L+ACSH GLV EG   ++ M   LG+ P  EH  
Sbjct: 645 GHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVS 704

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLL RAG L EA   IK M   P++ +W  LLA+ K H N  + E AA  IL+++P 
Sbjct: 705 CMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENILKLDPS 764

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           N    VL+SNI+A    W +VA +R +MK++ V+K PG S + V   +H F 
Sbjct: 765 NSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQIHVFF 816



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 253/516 (49%), Gaps = 7/516 (1%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           NS +    K      AL+ + F  KN S ++++ T   ++ AC  +     GK+IH   +
Sbjct: 125 NSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHIL 184

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+    D  + N ++ MY +CGSL  AR  FD M  R+VVSW+ MI GY + G   +A+ 
Sbjct: 185 KSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAII 244

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M      P  +   S++       D+DLG+ +H  V+++  D  L      ALI M
Sbjct: 245 MYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHL--IAQNALISM 302

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF-PSEIT 277
           Y++ G + +A  +F  ++   ++SW  MI+G+ +     E + LF +M  +  + P+E  
Sbjct: 303 YTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFI 362

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             S+   C  +   + G+ +H    + G   ++    +L DMY K   + SA   F  ++
Sbjct: 363 FGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIE 422

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           S D++ WNA+I+A++ +  +++A   F  M  + + P+ +T + LL  C     +  G  
Sbjct: 423 SPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQ 482

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHG 456
           +H+YI K GL+ +  +  +L+ MY KC +++ A+ +F +     ++  WNA+++    H 
Sbjct: 483 IHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHK 542

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
              E    F  M  S  KP+ IT   +L  C+    +  G  V    V   GLV  +   
Sbjct: 543 QAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKS-GLVVDVSVS 601

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
             ++D+  + G L  A ++  S    P+++ W +L+
Sbjct: 602 NRLIDMYAKCGSLKHARDVFGSTQ-NPDIVSWSSLI 636



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 212/406 (52%), Gaps = 8/406 (1%)

Query: 185 VADVDLGKAIHACVVR-NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSW 243
           +  +  GK IH  +++ NC+ +   + +   +++MY KCG+L  A++ F+ +   +VVSW
Sbjct: 170 IRSLKYGKKIHDHILKSNCQPD---LVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSW 226

Query: 244 TVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
           T+MISGY +  + N+ + ++ +M++   FP  +T  S+I  C   G + LG+ LH ++++
Sbjct: 227 TIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIK 286

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
           +G++  L   NAL+ MY +  +I  A  +F  + +KD++ W ++I+ + Q     +A  L
Sbjct: 287 SGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYL 346

Query: 364 FIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYA 422
           F  M +    +PNE     + S C      E G+ +H    K GL  +V    +L DMYA
Sbjct: 347 FRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYA 406

Query: 423 KCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
           K G +  A R F +    D+  WNA++A +   G   EA+ FF  M  +G+ P+GITF+ 
Sbjct: 407 KFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLS 466

Query: 483 LLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
           LL AC     + +G  +   ++  +GL  +      ++ +  +   L +A  + K +   
Sbjct: 467 LLCACGSPVTINQGTQIHSYIIK-IGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSEN 525

Query: 543 PNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNI 588
            N++ W A+L+A   HK    GE+     L +  +N   N+ ++ I
Sbjct: 526 ANLVSWNAILSACLQHKQ--AGEVFRLFKLMLFSENKPDNITITTI 569



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 147/280 (52%), Gaps = 11/280 (3%)

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           +LI+ C  +  L+ GK +H +IL++  +  L + N +++MYGKC  ++ AR  FD M+ +
Sbjct: 162 NLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLR 221

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           +V+ W  +IS Y+Q    + A  ++I M  S   P+ +T   ++  C  AG +++G+ LH
Sbjct: 222 NVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLH 281

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
            ++ K G +  +I + AL+ MY + G +  A  +F+    +D+  W +M+ G+   G   
Sbjct: 282 GHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEI 341

Query: 460 EALIFFVDMERSGV-KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLVPKIE 514
           EAL  F DM R G  +PN   F  + +AC  + L  E    F + +HG+    GL   + 
Sbjct: 342 EALYLFRDMFRQGFYQPNEFIFGSVFSAC-RSLLEPE----FGRQIHGMCAKFGLGRNVF 396

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
               + D+  + G L  A      +   P+++ W A++AA
Sbjct: 397 AGCSLCDMYAKFGFLPSAIRAFYQIE-SPDLVSWNAIIAA 435



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 170/332 (51%), Gaps = 16/332 (4%)

Query: 28  SYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           ++  I +P L  +N+++ ++  +   + A+  +  M   G   D  T  ++L AC   + 
Sbjct: 417 AFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVT 476

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF-DEMPNRDVVSWSTMIR 145
            + G +IH + IK GLD +A V N+L+ MY++C +L  A  +F D   N ++VSW+ ++ 
Sbjct: 477 INQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILS 536

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
              +     E   + + M F + +P  + + +++   A++A +++G  +H   V++    
Sbjct: 537 ACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKS--GL 594

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
            + V+++  LIDMY+KCG+L +A+ +F       +VSW+ +I GY +    +E + LF  
Sbjct: 595 VVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRM 654

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA------NALVDM 319
           M    V P+E+T L ++  C  +G ++ G W H Y   N  E  L +       + +VD+
Sbjct: 655 MKNLGVQPNEVTYLGVLSACSHIGLVEEG-W-HFY---NTMEIELGIPPTREHVSCMVDL 709

Query: 320 YGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
             +   +  A      M  + D+ +W  ++++
Sbjct: 710 LARAGCLYEAENFIKKMGFNPDITMWKTLLAS 741



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 142/277 (51%), Gaps = 22/277 (7%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++++ +++ +      ++  M  + ++ DN TI TIL  CA++    +G ++H 
Sbjct: 528 LVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHC 587

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F++K+GL  D  VSN LI MY++CGSL  AR +F    N D+VSWS++I GY + GL  E
Sbjct: 588 FSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHE 647

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA--- 212
           AL + R M+ + ++P+EV  + ++S  + +  V+ G   +     N  + +LG+      
Sbjct: 648 ALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFY-----NTMEIELGIPPTREH 702

Query: 213 -TALIDMYSKCGNLAYAKQLFNRLNQNSVVS-WTVMISGYIRCNEINEGVRLFAEMIEEN 270
            + ++D+ ++ G L  A+    ++  N  ++ W  +++    C     G    AE   EN
Sbjct: 703 VSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLAS---CK--THGNVDIAERAAEN 757

Query: 271 VF---PSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
           +    PS    L L+          +G W     LRN
Sbjct: 758 ILKLDPSNSAALVLLSNI----HASVGNWKEVARLRN 790


>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
 gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/636 (32%), Positives = 339/636 (53%), Gaps = 76/636 (11%)

Query: 66  GSEVDNFTIPTILKACAQVLMTHLG-KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVS 124
            S  D+     +L +C +  ++ +  + +H   IK+G   + ++ N LI  YS+CGSL  
Sbjct: 14  SSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLED 73

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD----------------- 167
            R +FD+MP R++ +W++++ G  + G  +EA  + R M   D                 
Sbjct: 74  GRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRC 133

Query: 168 --------------IRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAI 211
                            +E +  S++S  + + D++ G  +H+ + ++    D    V I
Sbjct: 134 EEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSD----VYI 189

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
            +AL+DMYSKCGN+  A+++F+ +   +VVSW  +I+ + +     E + +F  M+E  V
Sbjct: 190 GSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRV 249

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSAR 330
            P E+T+ S+I  C  +  +++G+ +H  +++N      + ++NA VDMY KC  I+ AR
Sbjct: 250 EPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEAR 309

Query: 331 TLFDGMK-------------------------------SKDVMIWNAVISAYAQAHCIDK 359
            +FD M                                 ++V+ WNA+I+ Y Q    ++
Sbjct: 310 FIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEE 369

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL------EVDVIL 413
           A  LF  +K   V P   +   +L  C +   L +G   H ++ K G       E D+ +
Sbjct: 370 ALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFV 429

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
             +L+DMY KCG V   Y +F + + RD   WNAM+ G+  +G G EAL  F +M  SG 
Sbjct: 430 GNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE 489

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
           KP+ IT IG+L+AC HAG V EG+  F  M    G+ P  +HY CMVDLLGRAG L+EA 
Sbjct: 490 KPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAK 549

Query: 534 EMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVAN 593
            MI+ MP++P+ ++WG+LLAA K+H+N ++G+  A ++LE+EP N G  VL+SN+YA   
Sbjct: 550 SMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELG 609

Query: 594 RWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +W DV  VR+ M++  V K+PG S +++ G  H F+
Sbjct: 610 KWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFM 645



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 241/456 (52%), Gaps = 40/456 (8%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+V+ + ++++   AL  +A M K G  ++ ++  ++L AC+ +   + G ++H    
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+    D Y+ +AL+ MYS+CG++  A+ +FDEM +R+VVSW+++I  + + G   EAL+
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V + M    + P EV + S++S  A ++ + +G+ +H  VV+N K  +  + ++ A +DM
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDK-LRNDIILSNAFVDM 298

Query: 219 YSKCGNLAYAKQLFN-------------------------------RLNQNSVVSWTVMI 247
           Y+KC  +  A+ +F+                               ++ + +VVSW  +I
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALI 358

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           +GY +  E  E + LF  +  E+V P+  +  +++  C  +  L LG   H ++L++GF+
Sbjct: 359 AGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 418

Query: 308 FS------LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
           F       + + N+L+DMY KC  +     +F  M  +D + WNA+I  +AQ    ++A 
Sbjct: 419 FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEAL 478

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-WLHTYIEKQGLEVDVILKTALVDM 420
           ELF  M  S  +P+ +TM+G+LS C  AG +E G+ +  +     G+       T +VD+
Sbjct: 479 ELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDL 538

Query: 421 YAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
             + G +  A  +  E  +  D  +W +++A   +H
Sbjct: 539 LGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 113/225 (50%), Gaps = 16/225 (7%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH- 94
           +  +N+L+  Y +N +   AL+++  +++      +++   ILKACA +   HLG + H 
Sbjct: 351 VVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHV 410

Query: 95  -----GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
                GF  ++G + D +V N+LI MY +CG +     +F +M  RD VSW+ MI G+ +
Sbjct: 411 HVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQ 470

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
            G   EALE+ REM     +P  + MI ++S       V+ G+   + + R+      GV
Sbjct: 471 NGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRD-----FGV 525

Query: 210 AIA----TALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISG 249
           A      T ++D+  + G L  AK +   +  Q   V W  +++ 
Sbjct: 526 APLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570


>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Vitis vinifera]
          Length = 642

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/588 (36%), Positives = 328/588 (55%), Gaps = 39/588 (6%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMP 133
           ++L+ C  +      K+I    +  GL  D + S+ LI     SE   L     +     
Sbjct: 11  SLLEKCKSISQL---KQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFNTR 67

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGK 192
           N +  SW+  IRG+     P EA+ + + +   D  +P       +    A ++ + +G 
Sbjct: 68  NPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGS 127

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
            I   V+    D    + ++ A+I +   CG+L  A+++F++     +VSW  MI+GY+R
Sbjct: 128 EILGHVLHLGFDSD--IFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYVR 185

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
                E +  + EM  E + P E+T++ ++  C  +  L LG+  H YI  NG + ++ +
Sbjct: 186 RGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPL 245

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSK-------------------------------DV 341
           ANAL+DMY KC  + SAR LFD M +K                               DV
Sbjct: 246 ANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDV 305

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           + WNA+I  Y  A+   +A  LF  M+   + P+EVTMV  LS C++ GAL++G W+H Y
Sbjct: 306 VPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHY 365

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
           IEK  L ++V L TAL+DMYAKCG +  A ++F E   R+   W A+++G  +HG    A
Sbjct: 366 IEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNAHGA 425

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVD 521
           + +F +M  + V P+ +TF+GLL+AC H GLV EG+  F +M     L PK++HY CMVD
Sbjct: 426 IAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVD 485

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGY 581
           LLGRAGLL+EA E+IKSMP+  + +VWGAL  A ++H N  MGE AA+++L+++P + G 
Sbjct: 486 LLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGI 545

Query: 582 NVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            VL++N+Y  A  W +    R++M++  V+K PG SS+EVNG+V++FI
Sbjct: 546 YVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSIEVNGIVYEFI 593



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/461 (34%), Positives = 238/461 (51%), Gaps = 37/461 (8%)

Query: 31  NIINPLT-RYNSLVTSYIKNNKPSSALNIYA-FMRKNGSEVDNFTIPTILKACAQVLMTH 88
           N  NP T  +N  +  ++ +  P  A+ +Y   ++ +G++ DN+T P + KACA++ +  
Sbjct: 65  NTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIR 124

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           +G EI G  +  G D D +VSNA+I +   CG L  AR +FD+   RD+VSW++MI GY 
Sbjct: 125 MGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGYV 184

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           R G   EAL   REM+   I+P EV MI +VS  A + D+DLG+  H  +  N    KL 
Sbjct: 185 RRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEEN--GLKLT 242

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV----------------------- 245
           V +A AL+DMY KCGNL  A++LF+ +   ++VSWT                        
Sbjct: 243 VPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPD 302

Query: 246 --------MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
                   MI GY+  N   E + LF EM   N+ P E+T++S +  C  +G L +G W+
Sbjct: 303 KDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWI 362

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           H YI ++    ++A+  AL+DMY KC +I  A  +F  +  ++ + W A+IS  A     
Sbjct: 363 HHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHGNA 422

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTA 416
             A   F  M  + V P+EVT +GLLS C   G +E G K+      K  L   +   + 
Sbjct: 423 HGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSC 482

Query: 417 LVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMHG 456
           +VD+  + G +  A  L  S  I  D  +W A+     +HG
Sbjct: 483 MVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHG 523


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/540 (35%), Positives = 322/540 (59%), Gaps = 3/540 (0%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           +IH   + +GL    ++    +      G +  AR +FDE P   V  W+ +IRGY    
Sbjct: 89  QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
              +A+E+   M+   + P    +  ++   + V  +++GK +H  + R   +    V +
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESD--VFV 206

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
              L+ +Y+KCG +  A+ +F  L+  ++VSWT MISGY +     E +R+F +M + NV
Sbjct: 207 QNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNV 266

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P  I ++S++     V  L+ GK +H  +++ G EF   +  +L  MY KC ++  AR+
Sbjct: 267 KPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARS 326

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
            FD M+  +VM+WNA+IS YA+    ++A  LF  M    +R + +T+   +  C + G+
Sbjct: 327 FFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGS 386

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L++ KW+  YI K     DV + TAL+DM+AKCG V+ A  +F   + +D+ +W+AM+ G
Sbjct: 387 LDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVG 446

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           YG+HG G++A+  F  M+++GV PN +TF+GLL AC+H+GLV EG  +F  M +  G+  
Sbjct: 447 YGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKY-YGIEA 505

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
           + +HY C+VDLLGR+G L+EA++ I +MP+ P + VWGALL A K++++ ++GE AA Q+
Sbjct: 506 RHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQL 565

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             ++P N G+ V +SN+YA +  W+ VA VR +M+E  + K+ G+S +E+NG +  F  G
Sbjct: 566 FSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVG 625



 Score =  286 bits (731), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 145/414 (35%), Positives = 241/414 (58%), Gaps = 3/414 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y  +N    A+ +Y+ M+ +G   D FT+P +LKAC+ V +  +GK +HG   
Sbjct: 137 WNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIF 196

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G + D +V N L+ +Y++CG +  AR +F+ + +R++VSW++MI GY + GLP EAL 
Sbjct: 197 RLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALR 256

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +MR  +++P  +A++S++  + DV D++ GK+IH CVV+   + +  + I  +L  M
Sbjct: 257 IFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLI--SLTAM 314

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG +  A+  F+++   +V+ W  MISGY +    NE V LF EMI +N+    IT+
Sbjct: 315 YAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITV 374

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S I+ C  VG L L KW+  YI +  +   + +  AL+DM+ KC  +  AR +FD    
Sbjct: 375 RSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLD 434

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KDV++W+A+I  Y        A +LF  MK + V PN+VT VGLL+ C  +G +E G  L
Sbjct: 435 KDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWEL 494

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAG 451
              ++  G+E        +VD+  + G +N AY   +   I   + +W A++  
Sbjct: 495 FHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLGA 548



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 160/316 (50%), Gaps = 3/316 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + S+++ Y +N  P  AL I+  MR+   + D   + ++L+A   V     GK IHG
Sbjct: 235 IVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHG 294

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K GL+ +  +  +L  MY++CG ++ AR  FD+M   +V+ W+ MI GY + G   E
Sbjct: 295 CVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNE 354

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+ + +EM   +IR   + + S +   A V  +DL K +   +  N  + +  V + TAL
Sbjct: 355 AVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYI--NKTEYRNDVFVNTAL 412

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           IDM++KCG++  A+++F+R     VV W+ MI GY       + + LF  M +  V P++
Sbjct: 413 IDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPND 472

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T + L+  C   G ++ G  L   +   G E        +VD+ G+   +  A      
Sbjct: 473 VTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITT 532

Query: 336 MK-SKDVMIWNAVISA 350
           M     V +W A++ A
Sbjct: 533 MPIEPGVSVWGALLGA 548


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/597 (33%), Positives = 354/597 (59%), Gaps = 6/597 (1%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           +P++ +NS++++++   +   AL+++  M++ G E + +T  + L+AC       +G+ I
Sbjct: 215 DPVS-WNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGI 273

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           H   +K+    D YVSNALI MY+ CG +  A  +F  M  +D VSW+T++ G  +  + 
Sbjct: 274 HAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMY 333

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            +A+   ++M+    +P +V++++M++     A++  G  +HA  +++  D  +   I  
Sbjct: 334 SDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNM--HIGN 391

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-EGVRLFAEMIEENVF 272
           +LIDMY KC  + Y    F  + +  ++SWT +I+GY + NE + + + L  ++  E + 
Sbjct: 392 SLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQ-NECHLDALNLLRKVQLEKMD 450

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
              + I S+++ C  +   +L K +H Y+L+ G    + + NA+V++YG+   +  AR +
Sbjct: 451 VDPMMIGSILLACSGLKSEKLIKEIHGYVLKGGLA-DILIQNAIVNVYGELALVDYARHV 509

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ + SKD++ W ++I+         +A ELF  +  + + P+ +T+V +L       +L
Sbjct: 510 FESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSL 569

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           + GK +H ++ ++G  ++ ++  +LVDMYA+CG +  A  +F+    RD+ +W +M+   
Sbjct: 570 KKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINAN 629

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
           GMHGCG++A+  F  M    V P+ ITF+ LL ACSH+GLV EGK  F+ M +   L P 
Sbjct: 630 GMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPW 689

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
            EHY C+VDLL R+  L+EA+  +++MP+ P+  VW ALL A ++H N  +GE+AA ++L
Sbjct: 690 PEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLL 749

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           ++  +N G  VL+SN +A   RWNDV  VR +MK  ++KK+PG S +EV   +H F+
Sbjct: 750 QLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFM 806



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 159/577 (27%), Positives = 297/577 (51%), Gaps = 34/577 (5%)

Query: 10  LEQTRQCHAHIIKTH---------FKF--------SYTNIINPLTR--------YNSLVT 44
           L Q +Q HAH +KT           KF        S+ + +    +        +N+++ 
Sbjct: 62  LPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIG 121

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
           + +   +   A+ +Y  MR  G  +D FT P +LKAC       LG EIHG A+K G  G
Sbjct: 122 ACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGG 181

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDE--MPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
             +V NALI MY++CG L  AR LFD   M   D VSW+++I  +   G   EAL + R 
Sbjct: 182 FVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRR 241

Query: 163 MRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC 222
           M+ + +  +    +S +        + +G+ IHA ++++  +    V ++ ALI MY+ C
Sbjct: 242 MQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKS--NHFTDVYVSNALIAMYANC 299

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI 282
           G +  A+++F  +     VSW  ++SG ++ +  ++ +  F +M +    P ++++L++I
Sbjct: 300 GQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMI 359

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
              G    L  G  +HAY +++G + ++ + N+L+DMYGKC  ++   + F+ M  KD++
Sbjct: 360 AASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLI 419

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
            W  +I+ YAQ  C   A  L   +++ K+  + + +  +L  C+   + ++ K +H Y+
Sbjct: 420 SWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYV 479

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
            K GL  D++++ A+V++Y +   V+ A  +F     +DI  W +M+     +G   EAL
Sbjct: 480 LKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEAL 538

Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVD 521
             F  +  + ++P+ IT + +L A +    + +GK +   ++  G  L   I +   +VD
Sbjct: 539 ELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIAN--SLVD 596

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +  R G ++ A  +   +  R ++I+W +++ A+ +H
Sbjct: 597 MYARCGTMENARNIFNYVKQR-DLILWTSMINANGMH 632



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 235/485 (48%), Gaps = 20/485 (4%)

Query: 78  LKACAQVLMTHLGKEIHGFAIK--NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           L+ CA       G+++H   +K  N LD   ++    + MY +CGS   A  +FD+M  R
Sbjct: 53  LELCASHKALPQGQQLHAHFLKTQNYLDS-VFLDTKFVHMYGKCGSFYDAVKVFDKMSER 111

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
            + +W+ MI      G   EA+E+ +EMR + +         ++       +  LG  IH
Sbjct: 112 TIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIH 171

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR--LNQNSVVSWTVMISGYIRC 253
              V+ C      V +  ALI MY+KCG+L  A+ LF+   + ++  VSW  +IS ++  
Sbjct: 172 GVAVK-CGYGGF-VFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGE 229

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
            E  E + LF  M E  V  +  T +S +  C     +++G+ +HA IL++     + ++
Sbjct: 230 GESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVS 289

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           NAL+ MY  C ++  A  +F  M  KD + WN ++S   Q      A   F  M+ S  +
Sbjct: 290 NALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQK 349

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           P++V+++ +++    +  L  G  +H Y  K G++ ++ +  +L+DMY KC  V      
Sbjct: 350 PDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSA 409

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFF--VDMERSGVKPNGITFIGLLNACSHAG 491
           F     +D+  W  ++AGY  + C  +AL     V +E+  V P  I  I L  ACS  G
Sbjct: 410 FEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILL--ACS--G 465

Query: 492 LVTEGKSVFDKMVHGL---GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           L +E      K +HG    G +  I     +V++ G   L+D A  + +S+  + +++ W
Sbjct: 466 LKSEK---LIKEIHGYVLKGGLADILIQNAIVNVYGELALVDYARHVFESINSK-DIVSW 521

Query: 549 GALLA 553
            +++ 
Sbjct: 522 TSMIT 526


>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 884

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 217/591 (36%), Positives = 339/591 (57%), Gaps = 4/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++SY  + K    L ++  M   G   +++TI + L AC       LGKEIH   +
Sbjct: 252 WNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVL 311

Query: 99  KNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           K+     + YV NALI MY+ CG +  A  +  +M N DVV+W+++I+GY +  + +EAL
Sbjct: 312 KSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEAL 371

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           E   +M     +  EV+M S+++    ++++  G  +HA V+++  D  L V     LID
Sbjct: 372 EFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG--NTLID 429

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYSKC    Y  + F R++   ++SWT +I+GY + +   E + LF ++ ++ +   E+ 
Sbjct: 430 MYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMI 489

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           + S++     +  + + K +H +ILR G      + N LVD+YGKCR +  A  +F+ +K
Sbjct: 490 LGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIK 548

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KDV+ W ++IS+ A      +A ELF  M  + +  + V ++ +LS      AL  G+ 
Sbjct: 549 GKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGRE 608

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H Y+ ++G  ++  +  A+VDMYA CGD+  A  +F     + +  + +M+  YGMHGC
Sbjct: 609 IHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGC 668

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G+ A+  F  M    V P+ I+F+ LL ACSHAGL+ EG+     M H   L P  EHY 
Sbjct: 669 GKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV 728

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           C+VD+LGRA  + EA E +K M   P   VW ALLAA + H    +GEIAA ++LE+EP+
Sbjct: 729 CLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPK 788

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           N G  VL+SN++A   RWNDV  VR  MK   ++K PG S +E++G VHKF
Sbjct: 789 NPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKF 839



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 259/546 (47%), Gaps = 30/546 (5%)

Query: 35  PLTRYNSLVTSYIKNNKPSSALNIY------AFMR----KNGSEVDNFTIPTILKACAQV 84
           P  R N    S      PS  L  +      AF R    +N S V+ F    +L+ C + 
Sbjct: 36  PSCRRNPFRQSNQPVQVPSPKLACFDGVLTEAFQRLDVSENNSPVEAFAY--VLELCGKR 93

Query: 85  LMTHLGKEIHGFAIKN--GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
                G+++H    K     + D +++  L+ MY +CGSL  A  +FDEMP+R   +W+T
Sbjct: 94  RAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNT 152

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           MI  Y   G P  AL +   MR   +     +  +++   A + D+  G  +H+ +V   
Sbjct: 153 MIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLV--- 209

Query: 203 KDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQN-SVVSWTVMISGYIRCNEIN 257
              KLG      I  AL+ MY+K  +L+ A++LF+   +    V W  ++S Y    +  
Sbjct: 210 ---KLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSL 266

Query: 258 EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS-LAMANAL 316
           E + LF EM      P+  TI+S +  C      +LGK +HA +L++    S L + NAL
Sbjct: 267 ETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNAL 326

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           + MY +C ++  A  +   M + DV+ WN++I  Y Q     +A E F  M  +  + +E
Sbjct: 327 IAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDE 386

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           V+M  +++       L  G  LH Y+ K G + ++ +   L+DMY+KC       R F  
Sbjct: 387 VSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLR 446

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
              +D+  W  ++AGY  + C  EAL  F D+ +  ++ + +    +L A S    +   
Sbjct: 447 MHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIV 506

Query: 497 KSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
           K +   ++    L   I++   +VD+ G+   +  A  + +S+  + +++ W +++++S 
Sbjct: 507 KEIHCHILRKGLLDTVIQNE--LVDVYGKCRNMGYATRVFESIKGK-DVVSWTSMISSSA 563

Query: 557 LHKNPS 562
           L+ N S
Sbjct: 564 LNGNES 569



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 165/321 (51%), Gaps = 13/321 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + +++  Y +N+    AL ++  + K   E+D   + +IL+A + +    + KEIH 
Sbjct: 452 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             ++ GL  D  + N L+ +Y +C ++  A  +F+ +  +DVVSW++MI      G   E
Sbjct: 512 HILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+E+ R M    +    VA++ ++S  A ++ ++ G+ IH  ++R  K   L  +IA A+
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLR--KGFCLEGSIAVAV 628

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+ CG+L  AK +F+R+ +  ++ +T MI+ Y         V LF +M  ENV P  
Sbjct: 629 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDH 688

Query: 276 ITILSLIIECGFVGGLQLGKWL-----HAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           I+ L+L+  C   G L  G+       H Y L    E  +     LVDM G+   +  A 
Sbjct: 689 ISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV----CLVDMLGRANCVVEAF 744

Query: 331 TLFDGMKSKDVM-IWNAVISA 350
                MK++    +W A+++A
Sbjct: 745 EFVKMMKTEPTAEVWCALLAA 765


>gi|186512044|ref|NP_001119013.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635616|sp|P0C8Q2.1|PP323_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19191, mitochondrial; Flags: Precursor
 gi|332658758|gb|AEE84158.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/602 (34%), Positives = 330/602 (54%), Gaps = 5/602 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           ++ +  +N  +   +  N P  +L ++  M++ G E +NFT P + KACA++      + 
Sbjct: 14  LSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEM 73

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H   IK+    D +V  A + M+ +C S+  A  +F+ MP RD  +W+ M+ G+ + G 
Sbjct: 74  VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            ++A  + REMR  +I P  V +++++   +    + L +A+HA  +R   D  + V +A
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD--VQVTVA 191

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQ--NSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
              I  Y KCG+L  AK +F  +++   +VVSW  M   Y    E  +   L+  M+ E 
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 251

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
             P   T ++L   C     L  G+ +H++ +  G +  +   N  + MY K  +  SAR
Sbjct: 252 FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 311

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            LFD M S+  + W  +IS YA+   +D+A  LF  M  S  +P+ VT++ L+S C + G
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG 371

Query: 391 ALEMGKWLHTYIEKQGLEVD-VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           +LE GKW+    +  G + D V++  AL+DMY+KCG ++ A  +F     + +  W  M+
Sbjct: 372 SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMI 431

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           AGY ++G   EAL  F  M     KPN ITF+ +L AC+H+G + +G   F  M     +
Sbjct: 432 AGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNI 491

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            P ++HY CMVDLLGR G L+EA E+I++M  +P+  +WGALL A K+H+N  + E AA 
Sbjct: 492 SPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAE 551

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            +  +EPQ     V M+NIYA A  W+  A +R +MK+  +KK PG S ++VNG  H F 
Sbjct: 552 SLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFT 611

Query: 630 RG 631
            G
Sbjct: 612 VG 613



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 152/301 (50%), Gaps = 5/301 (1%)

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
           ++L+     +SV +W + I   +  N+  E + LF EM      P+  T   +   C  +
Sbjct: 6   RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
             +   + +HA+++++ F   + +  A VDM+ KC  +  A  +F+ M  +D   WNA++
Sbjct: 66  ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
           S + Q+   DKAF LF  M+++++ P+ VT++ L+   +   +L++ + +H    + G++
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAI---YRDICMWNAMMAGYGMHGCGEEALIFF 465
           V V +    +  Y KCGD++ A  +F EAI    R +  WN+M   Y + G   +A   +
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVF-EAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLY 244

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
             M R   KP+  TFI L  +C +   +T+G+ +    +H LG    IE     + +  +
Sbjct: 245 CLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIH-LGTDQDIEAINTFISMYSK 303

Query: 526 A 526
           +
Sbjct: 304 S 304


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 217/591 (36%), Positives = 339/591 (57%), Gaps = 4/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++SY  + K    L ++  M   G   +++TI + L AC       LGKEIH   +
Sbjct: 215 WNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVL 274

Query: 99  KNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           K+     + YV NALI MY+ CG +  A  +  +M N DVV+W+++I+GY +  + +EAL
Sbjct: 275 KSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEAL 334

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           E   +M     +  EV+M S+++    ++++  G  +HA V+++  D  L V     LID
Sbjct: 335 EFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG--NTLID 392

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYSKC    Y  + F R++   ++SWT +I+GY + +   E + LF ++ ++ +   E+ 
Sbjct: 393 MYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMI 452

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           + S++     +  + + K +H +ILR G      + N LVD+YGKCR +  A  +F+ +K
Sbjct: 453 LGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIK 511

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KDV+ W ++IS+ A      +A ELF  M  + +  + V ++ +LS      AL  G+ 
Sbjct: 512 GKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGRE 571

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H Y+ ++G  ++  +  A+VDMYA CGD+  A  +F     + +  + +M+  YGMHGC
Sbjct: 572 IHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGC 631

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G+ A+  F  M    V P+ I+F+ LL ACSHAGL+ EG+     M H   L P  EHY 
Sbjct: 632 GKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV 691

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           C+VD+LGRA  + EA E +K M   P   VW ALLAA + H    +GEIAA ++LE+EP+
Sbjct: 692 CLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPK 751

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           N G  VL+SN++A   RWNDV  VR  MK   ++K PG S +E++G VHKF
Sbjct: 752 NPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKF 802



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 220/452 (48%), Gaps = 17/452 (3%)

Query: 119 CGS--LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMI 176
           CG    VS   +FDEMP+R   +W+TMI  Y   G P  AL +   MR   +     +  
Sbjct: 90  CGKRRAVSQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFP 149

Query: 177 SMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLF 232
           +++   A + D+  G  +H+ +V      KLG      I  AL+ MY+K  +L+ A++LF
Sbjct: 150 ALLKACAKLRDIRSGSELHSLLV------KLGYHSTGFIVNALVSMYAKNDDLSAARRLF 203

Query: 233 NRLNQN-SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL 291
           +   +    V W  ++S Y    +  E + LF EM      P+  TI+S +  C      
Sbjct: 204 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 263

Query: 292 QLGKWLHAYILRNGFEFS-LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
           +LGK +HA +L++    S L + NAL+ MY +C ++  A  +   M + DV+ WN++I  
Sbjct: 264 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 323

Query: 351 YAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
           Y Q     +A E F  M  +  + +EV+M  +++       L  G  LH Y+ K G + +
Sbjct: 324 YVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSN 383

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
           + +   L+DMY+KC       R F     +D+  W  ++AGY  + C  EAL  F D+ +
Sbjct: 384 LQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK 443

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
             ++ + +    +L A S    +   K +   ++    L   I++   +VD+ G+   + 
Sbjct: 444 KRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNE--LVDVYGKCRNMG 501

Query: 531 EAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
            A  + +S+  + +++ W +++++S L+ N S
Sbjct: 502 YATRVFESIKGK-DVVSWTSMISSSALNGNES 532



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 165/321 (51%), Gaps = 13/321 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + +++  Y +N+    AL ++  + K   E+D   + +IL+A + +    + KEIH 
Sbjct: 415 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 474

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             ++ GL  D  + N L+ +Y +C ++  A  +F+ +  +DVVSW++MI      G   E
Sbjct: 475 HILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 533

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+E+ R M    +    VA++ ++S  A ++ ++ G+ IH  ++R  K   L  +IA A+
Sbjct: 534 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLR--KGFCLEGSIAVAV 591

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+ CG+L  AK +F+R+ +  ++ +T MI+ Y         V LF +M  ENV P  
Sbjct: 592 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDH 651

Query: 276 ITILSLIIECGFVGGLQLGKWL-----HAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           I+ L+L+  C   G L  G+       H Y L    E  +     LVDM G+   +  A 
Sbjct: 652 ISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV----CLVDMLGRANCVVEAF 707

Query: 331 TLFDGMKSKDVM-IWNAVISA 350
                MK++    +W A+++A
Sbjct: 708 EFVKMMKTEPTAEVWCALLAA 728



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 3/238 (1%)

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
           ++++ GK R + S   +FD M  +    WN +I AY        A  L+ +M+V  V   
Sbjct: 86  VLELCGKRRAV-SQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 144

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
             +   LL  C +   +  G  LH+ + K G      +  ALV MYAK  D++ A RLF 
Sbjct: 145 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 204

Query: 436 EAIYR-DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
               + D  +WN++++ Y   G   E L  F +M  +G  PN  T +  L AC       
Sbjct: 205 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 264

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
            GK +   ++       ++     ++ +  R G + +A  +++ M    +++ W +L+
Sbjct: 265 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLI 321


>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/591 (32%), Positives = 346/591 (58%), Gaps = 5/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++ SY +      A +++  MR++G +  + T+ ++L   +++ +      +    I
Sbjct: 118 WTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCL---II 174

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +G + D  +SN+++ MY +CG +  AR LF+ +  RD+VSW++++  Y + G  EE L+
Sbjct: 175 LHGFESDLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQ 234

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +++ M+  DI+P +    S +S  A   D+ LGK +H  ++++     +   + +AL+ +
Sbjct: 235 LLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKD--GLNIDQHVESALVVL 292

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y +C  L  A ++F    +  VV WT MISG ++ +  ++ + +F +MIE NV PS  T+
Sbjct: 293 YLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATL 352

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +  C  +G   +G  +H Y+LR G    +   N+LV MY KC +++ + ++F+ M  
Sbjct: 353 ASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVE 412

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD++ WNA+++ +A+   + K    F  M+ S +RP+ +T+  LL  C  AGAL  GKW+
Sbjct: 413 KDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWI 472

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ +  L   ++ +TALVDMY KCG++  A + F   + RD+  W+ ++ GYG +G G
Sbjct: 473 HNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKG 532

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           E AL  + +   +G++PN + FI +L+ACSH GL+++G S+++ M     + P +EH  C
Sbjct: 533 EIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRAC 592

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VDLL RAG +DEA+   K M   P+++V G LL A +++    +G++ A  + E++P +
Sbjct: 593 VVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVD 652

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            G  V ++N YA  +RW+ V      M+ + +KK PG+SS+EV+G    F 
Sbjct: 653 PGNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFF 703



 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 161/536 (30%), Positives = 290/536 (54%), Gaps = 10/536 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSLV+           L  Y  M+K  +++D +T P++ KAC  + +   G  +H   +
Sbjct: 17  FNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVV 76

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            NGL  D+Y+ ++LI  Y++ G +   R +FD M  R+VV W+T+I  Y R G  + A  
Sbjct: 77  VNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFS 136

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + ++MR   I+P+ V   +++SL   ++ + L   +H  ++ +  +  L  A++ ++++M
Sbjct: 137 MFKQMRESGIQPTSV---TLLSLLPGISKLPLLLCLHCLIILHGFESDL--ALSNSMVNM 191

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCG +A A++LF  +    +VSW  ++S Y +     E ++L   M  E++ P + T 
Sbjct: 192 YGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTF 251

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +      G L+LGK +H  +L++G      + +ALV +Y +CR +  A  +F     
Sbjct: 252 CSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTE 311

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KDV++W A+IS   Q  C DKA  +F  M  S V+P+  T+   L+ C + G  ++G  +
Sbjct: 312 KDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASI 371

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H Y+ +QG+ +D+  + +LV MYAKC  +  +  +F++ + +D+  WNA++AG+  +G  
Sbjct: 372 HGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYL 431

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            + + FF +M +S ++P+ IT   LL AC  AG + +GK + + ++    L+P I     
Sbjct: 432 SKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRS-SLIPCIMTETA 490

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           +VD+  + G L+ A +    M L+ +++ W  L+     +     GEIA  +  E 
Sbjct: 491 LVDMYFKCGNLENAQKCFDCM-LQRDLVAWSTLIVGYGFNGK---GEIALRKYSEF 542



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 206/400 (51%), Gaps = 3/400 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +NSL+++Y K       L +   M+    + D  T  + L A A      LGK +HG
Sbjct: 213 IVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHG 272

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K+GL+ D +V +AL+ +Y  C  L  A  +F     +DVV W+ MI G  +    ++
Sbjct: 273 LMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADK 332

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL V  +M   +++PS   + S ++  A +   D+G +IH  V+R  +   L +    +L
Sbjct: 333 ALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLR--QGIMLDIPAQNSL 390

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           + MY+KC  L  +  +FN++ +  +VSW  +++G+ +   +++G+  F EM +  + P  
Sbjct: 391 VTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDS 450

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           IT+ SL+  CG  G L  GKW+H ++LR+     +    ALVDMY KC  + +A+  FD 
Sbjct: 451 ITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDC 510

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M  +D++ W+ +I  Y      + A   +     + + PN V  + +LS C+  G +  G
Sbjct: 511 MLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKG 570

Query: 396 KWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLF 434
             ++  + K   +  ++  +  +VD+ ++ G V+ AY  +
Sbjct: 571 LSIYESMTKDFRMSPNLEHRACVVDLLSRAGKVDEAYSFY 610


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 200/584 (34%), Positives = 336/584 (57%), Gaps = 2/584 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y++  +  SA+ ++  M  + ++ D+ T   +L       M   G+++HG  +
Sbjct: 79  WNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYGRQLHGLVV 138

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++GLD    V N L+ +YS+   L  AR LFD MP  D+V W+ MI GY + G  ++A  
Sbjct: 139 RSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASM 198

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  EM    I+P  +   S +   A+ + +   K IH  +VR+     L V + +ALID+
Sbjct: 199 LFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRH--GVILDVYLNSALIDL 256

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC +   A ++FN   +  +V +T MISGY+      + + +F  ++++ + P+ +T 
Sbjct: 257 YFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTF 316

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  ++LG+ LH YI++N  E    + +A+++MY KC  +  A  +F  +  
Sbjct: 317 SSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISI 376

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN++I++++Q    ++A  LF  M +  V+ + VT+   LS C    AL  GK +
Sbjct: 377 KDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEI 436

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ K   E D+   +AL++MYAKCG +N A  +F+    ++   WN+++A YG HG  
Sbjct: 437 HGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYL 496

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            ++L  F +M   G++P+ ITF+ +L++C HAG V +G   F  M    G+  ++EHY C
Sbjct: 497 ADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYAC 556

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           M DL GRAG LDEA E+I SMP  P   VWG LL A ++H N  + E+A+  +L++EP+N
Sbjct: 557 MADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVHGNVELAEVASRYLLDLEPKN 616

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
            GY +L++++ A A +W  V  ++ +MKE  V+K PG S +EVN
Sbjct: 617 SGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSWIEVN 660



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 256/489 (52%), Gaps = 4/489 (0%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF 129
           D +T P ++K C  +    LGK I    ++ G D D +V+++LI++Y++ G +  AR  F
Sbjct: 9   DKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFF 68

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           D+M ++D V W+ MI GY + G  + A+++ ++M   + +P  V    ++S+    A V+
Sbjct: 69  DKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVE 128

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
            G+ +H  VVR+  D      +   L+ +YSK   L  A++LF+ + Q  +V W  MI G
Sbjct: 129 YGRQLHGLVVRSGLD--FVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGG 186

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
           Y++   +++   LF EMI   + P  IT  S +        L+  K +H YI+R+G    
Sbjct: 187 YVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILD 246

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           + + +AL+D+Y KCR+   A  +F+     D++I+ A+IS Y        A E+F  +  
Sbjct: 247 VYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQ 306

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
            K+ PN +T   +L  C    A+++G+ LH YI K  LE    + +A+++MYAKCG ++ 
Sbjct: 307 KKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDL 366

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A+ +F     +D   WN+++  +   G  EEA+  F  M   GVK + +T    L+AC++
Sbjct: 367 AHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACAN 426

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
              +  GK +   M+ G      +     ++++  + G L+ A  +   M  + N + W 
Sbjct: 427 IPALHYGKEIHGFMIKG-AFESDLFDMSALINMYAKCGKLNIARLVFNLMQEK-NEVAWN 484

Query: 550 ALLAASKLH 558
           +++AA   H
Sbjct: 485 SIIAAYGYH 493



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 232/439 (52%), Gaps = 7/439 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N ++  Y++N     A  ++  M   G + D+ T  + L + A+       KEIHG
Sbjct: 177 LVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHG 236

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + +++G+  D Y+++ALI +Y +C   V A  +F+     D+V ++ MI GY   G+ ++
Sbjct: 237 YIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKD 296

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           ALE+ R +    + P+ +   S++   A +A + LG+ +H  +++N  +EK    + +A+
Sbjct: 297 ALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEK--CPVGSAI 354

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           ++MY+KCG L  A  +F R++    + W  +I+ + +  +  E + LF +M  E V    
Sbjct: 355 MNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDC 414

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T+ + +  C  +  L  GK +H ++++  FE  L   +AL++MY KC ++  AR +F+ 
Sbjct: 415 VTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNL 474

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M+ K+ + WN++I+AY     +  +  LF +M    ++P+ +T + +LS C  AG +E G
Sbjct: 475 MQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDG 534

Query: 396 -KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC-MWNAMMAGYG 453
            ++     E+ G+   +     + D++ + G ++ A+ + +   +     +W  ++    
Sbjct: 535 VRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACR 594

Query: 454 MHG---CGEEALIFFVDME 469
           +HG     E A  + +D+E
Sbjct: 595 VHGNVELAEVASRYLLDLE 613



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 137/265 (51%), Gaps = 10/265 (3%)

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M+   VFP + T   +I  C  +  ++LGK +   IL  GF+  + +A++L+ +Y     
Sbjct: 1   MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           I  AR  FD M  KD ++WN +I+ Y Q    D A +LF  M  S+ +P+ VT   +LS+
Sbjct: 61  IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
                 +E G+ LH  + + GL+   ++   LV +Y+K   +  A +LF      D+ +W
Sbjct: 121 SCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVW 180

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           N M+ GY  +G  ++A + F +M  +G+KP+ ITF   L + + +  + + K      +H
Sbjct: 181 NRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKE-----IH 235

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLD 530
           G      I  +G ++D+   + L+D
Sbjct: 236 GY-----IVRHGVILDVYLNSALID 255


>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 214/645 (33%), Positives = 345/645 (53%), Gaps = 86/645 (13%)

Query: 64  KNGSEVDNFTIPT----ILKACAQVLMTHLG-KEIHGFAIKNGLDGDAYVSNALIQMYSE 118
           K   ++ +FT+ +    +L +C ++ ++ +  + +H   IK+G   + ++ N LI  Y++
Sbjct: 8   KLAGDLSSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAK 67

Query: 119 CGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISM 178
           CGSL   R LFD+MP R+V +W++++ G  + G  +EA  + R M   D    +    SM
Sbjct: 68  CGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERD----QCTWNSM 123

Query: 179 VSLFAD-----------------------------------VADVDLGKAIHACVVRN-C 202
           VS FA                                    + D++ G  IH+ + ++ C
Sbjct: 124 VSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPC 183

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
             +   V I +AL+DMYSKCGN+  A+Q+F+ +   +VVSW  +I+ Y +     E +++
Sbjct: 184 LSD---VYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKV 240

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR-NGFEFSLAMANALVDMYG 321
           F  M+E  V P E+T+ S+I  C  +  +++G+ +HA +++ +     + ++NA VDMY 
Sbjct: 241 FQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYA 300

Query: 322 KCREIRSARTLFDGMK-------------------------------SKDVMIWNAVISA 350
           KC  I+ AR +FD M                                 ++V+ WNA+I+ 
Sbjct: 301 KCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAG 360

Query: 351 YAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL--- 407
           Y Q    ++A  LF  +K   V P   T   +L  C +   L +G   H ++ K G    
Sbjct: 361 YTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQ 420

Query: 408 ---EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIF 464
              E D+ +  +L+DMY KCG V   Y +F + + RD   WNAM+ G+  +G G EAL  
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALEL 480

Query: 465 FVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLG 524
           F +M  SG KP+ IT IG+L+AC HAG V EG+  F  M    G+ P  +HY CMVDLLG
Sbjct: 481 FREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLG 540

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVL 584
           RAG L+EA  +I+ MP++P+ ++WG+LLAA K+H+N ++G+  A ++ E+E  N G  VL
Sbjct: 541 RAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVL 600

Query: 585 MSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +SN+YA   +W D   VR++M++  V K+PG S +++ G  H F+
Sbjct: 601 LSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWIKIPGHAHVFM 645



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 241/458 (52%), Gaps = 44/458 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+V+ + ++++   AL  +A M K G  ++ +T  + L AC+ +   + G +IH    
Sbjct: 120 WNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIA 179

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+    D Y+ +AL+ MYS+CG++  A+ +FDEM +R+VVSW+++I  Y + G   EAL+
Sbjct: 180 KSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALK 239

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL--GVAIATALI 216
           V + M    + P EV + S++S  A ++ + +G+ +HA VV   K +KL   + ++ A +
Sbjct: 240 VFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVV---KMDKLRNDIILSNAFV 296

Query: 217 DMYSKCGNLAYAKQLFN-------------------------------RLNQNSVVSWTV 245
           DMY+KC  +  A+ +F+                               ++ + +VVSW  
Sbjct: 297 DMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNA 356

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
           +I+GY +  E  E + LF  +  E+V P+  T  +++  C  +  L LG   H ++L++G
Sbjct: 357 LIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHG 416

Query: 306 FEFS------LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
           F+F       + + N+L+DMY KC  +     +F  M  +D + WNA+I  +AQ    ++
Sbjct: 417 FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNE 476

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-WLHTYIEKQGLEVDVILKTALV 418
           A ELF  M  S  +P+ +TM+G+LS C  AG +E G+ +  +     G+       T +V
Sbjct: 477 ALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMV 536

Query: 419 DMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
           D+  + G +  A  +  E  +  D  +W +++A   +H
Sbjct: 537 DLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVH 574



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 16/225 (7%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH- 94
           +  +N+L+  Y +N +   AL+++  +++      ++T   ILKACA +   HLG + H 
Sbjct: 351 VVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHV 410

Query: 95  -----GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
                GF  ++G + D +V N+LI MY +CG +     +F +M  RD VSW+ MI G+ +
Sbjct: 411 HVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQ 470

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
            G   EALE+ REM     +P  + MI ++S       V+ G+   + + R+      GV
Sbjct: 471 NGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRD-----FGV 525

Query: 210 AIA----TALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISG 249
           A      T ++D+  + G L  AK +   +  Q   V W  +++ 
Sbjct: 526 APLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAA 570


>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1028

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/596 (34%), Positives = 343/596 (57%), Gaps = 6/596 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y  N +    + ++  M+ +G  +D+FT  ++L  CA      +G + H   I
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIII 455

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K  L  + +V NAL+ MY++CG+L  AR +F+ M +RD VSW+T+I GY +     EA +
Sbjct: 456 KKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFD 515

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M    I      + S +    +V  +  GK +H C+   C  +++ +   ++LIDM
Sbjct: 516 LFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVH-CLSVKCGLDRV-LHTGSSLIDM 573

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSKCG +  A+++F+ + + SVVS   +I+GY + N + E V LF EM+ + V PSEIT 
Sbjct: 574 YSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTKGVNPSEITF 632

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA-MANALVDMYGKCREIRSARTLFDGMK 337
            +++  C     L LG   H  I++ GF      +  +L+ +Y   R +  A  LF  + 
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELS 692

Query: 338 S-KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           S K +++W  ++S ++Q    ++A + +  M+     P++ T V +L +C+   +L  G+
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGR 752

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMH 455
            +H+ I     ++D +    L+DMYAKCGD+  + ++F E   R ++  WN+++ GY  +
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLINGYAKN 812

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  E+AL  F  M +S + P+ ITF+G+L ACSHAG V++G+ +F+ M+   G+  +++H
Sbjct: 813 GYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDH 872

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
             CMVDLLGR G L EA + I++  L+P+  +W +LL A ++H +   GEIAA +++E+E
Sbjct: 873 VACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGEIAAERLIELE 932

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           PQN    VL+SNIYA   RW +   +R+ M++  VKK PG+S ++V    H F  G
Sbjct: 933 PQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWIDVGQRRHIFAAG 988



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 146/516 (28%), Positives = 250/516 (48%), Gaps = 46/516 (8%)

Query: 29  YTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH 88
           + ++   +T +NS+++ Y    +P   L  +  + +N    + FT   +L   A+     
Sbjct: 118 FNSLEKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVE 177

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
            G++IH   IK GL+ ++Y   AL+ MY++C  L  A+ +FD + + + V W+ +  GY 
Sbjct: 178 FGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYV 237

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           + GLPEEA+ V   MR    RP  +A ++                               
Sbjct: 238 KAGLPEEAVIVFERMRGEGHRPDHLAFVT------------------------------- 266

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
                 +I+ Y   G L  A+ LF  +    VV+W VMISG+ +       +  F  M +
Sbjct: 267 ------VINTYISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRK 320

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
            +V  +  T+ S++   G V  L LG  +HA  ++ G   ++ + ++LV MY KC ++ +
Sbjct: 321 SSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEA 380

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           A  +F+ ++ ++ ++WNA+I  YA      K  ELF+ MK S    ++ T   LLS C  
Sbjct: 381 AAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAV 440

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
           +  LEMG   H+ I K+ L  ++ +  ALVDMYAKCG +  A ++F     RD   WN +
Sbjct: 441 SHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTI 500

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           + GY       EA   F+ M   G+  +G      L AC++   + +GK      VH L 
Sbjct: 501 IGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQ-----VHCLS 555

Query: 509 L---VPKIEHYG-CMVDLLGRAGLLDEAHEMIKSMP 540
           +   + ++ H G  ++D+  + G++++A ++  SMP
Sbjct: 556 VKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMP 591



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/534 (28%), Positives = 250/534 (46%), Gaps = 53/534 (9%)

Query: 29  YTNIINPLTR-YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  I++P T  +  L + Y+K   P  A+ ++  MR  G   D+    T+          
Sbjct: 218 FDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTV---------- 267

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
                                    I  Y   G L  AR LF EMP+ DVV+W+ MI G+
Sbjct: 268 -------------------------INTYISLGKLKDARLLFGEMPSPDVVAWNVMISGH 302

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
            + G    A+E    MR   ++ +   + S++S    VA++DLG  +HA  +      KL
Sbjct: 303 GKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI------KL 356

Query: 208 GVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
           G+A    + ++L+ MYSKC  +  A ++F  L + + V W  MI GY    E ++ + LF
Sbjct: 357 GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELF 416

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
            +M        + T  SL+  C     L++G   H+ I++     +L + NALVDMY KC
Sbjct: 417 MDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKC 476

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
             +  AR +F+ M  +D + WN +I  Y Q     +AF+LF+ M    +  +   +   L
Sbjct: 477 GALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLASTL 536

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
             CT    L  GK +H    K GL+  +   ++L+DMY+KCG +  A ++FS      + 
Sbjct: 537 KACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVV 596

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
             NA++AGY  +   EEA++ F +M   GV P+ ITF  ++ AC     +T G     ++
Sbjct: 597 SMNALIAGYSQNNL-EEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTLGTQFHGQI 655

Query: 504 VHGLGLVPKIEHYGCMVDLLG---RAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +   G   + E+ G  + LLG    +  + EA  +   +    ++++W  +++ 
Sbjct: 656 IK-WGFSSEGEYLG--ISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSG 706



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 115/528 (21%), Positives = 220/528 (41%), Gaps = 120/528 (22%)

Query: 65  NGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVS 124
           + S  D+F++   L +      T LG+ ++G  + N       +   L+++  E   L  
Sbjct: 10  SSSMFDSFSLVRRLSSS-----TELGRRVYGHVLPN----HDQIHQGLLEICLEQCKLFK 60

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           +R +FDEMP+R  ++                                             
Sbjct: 61  SRKVFDEMPHRLALA--------------------------------------------- 75

Query: 185 VADVDLGKAIHACVVRNCKDEKLGV----AIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
              + +GKA+H+      K   LG+     +  A++D+Y+KC  ++YA++ FN L ++ V
Sbjct: 76  ---LRIGKAVHS------KSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLEKD-V 125

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
            +W  M+S Y    +  + +R F  + E  +FP++ T   ++        ++ G+ +H  
Sbjct: 126 TAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCS 185

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           +++ G E +     ALVDMY KC  +  A+ +FDG+   + + W  + S Y +A   ++A
Sbjct: 186 MIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEA 245

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
             +F  M+    RP+ +  V                                    +++ 
Sbjct: 246 VIVFERMRGEGHRPDHLAFV-----------------------------------TVINT 270

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           Y   G +  A  LF E    D+  WN M++G+G  GC   A+ +F++M +S VK    T 
Sbjct: 271 YISLGKLKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTL 330

Query: 481 IGLLNACS-----HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEM 535
             +L+A         GLV   +++       LGL   I     +V +  +   ++ A ++
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAI------KLGLASNIYVGSSLVSMYSKCEKMEAAAKV 384

Query: 536 IKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNV 583
            +++  R N ++W A++     +     GE      L ++ ++ GYN+
Sbjct: 385 FEALEER-NDVLWNAMIRGYAHN-----GESHKVMELFMDMKSSGYNI 426



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 145/303 (47%), Gaps = 17/303 (5%)

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
            L++GK +H+  L  G +    + NA+VD+Y KC ++  A   F+ ++ KDV  WN+++S
Sbjct: 75  ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSLE-KDVTAWNSMLS 133

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
            Y+      K    F+ +  + + PN+ T   +LS       +E G+ +H  + K GLE 
Sbjct: 134 MYSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLER 193

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           +     ALVDMYAKC  +  A R+F   +  +   W  + +GY   G  EEA+I F  M 
Sbjct: 194 NSYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMR 253

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
             G +P+ + F+ ++N     G + + + +F +M       P +  +  M+   G+ G  
Sbjct: 254 GEGHRPDHLAFVTVINTYISLGKLKDARLLFGEMPS-----PDVVAWNVMISGHGKRGCE 308

Query: 530 DEAHEMIKSM---PLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMS 586
             A E   +M    ++      G++L+A  +  N  +G +   + +++         L S
Sbjct: 309 IVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG--------LAS 360

Query: 587 NIY 589
           NIY
Sbjct: 361 NIY 363



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 87/169 (51%), Gaps = 1/169 (0%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           FS  +    +  +  +++ + +N     AL  Y  MR +G+  D  T  T+L+ C+ +  
Sbjct: 688 FSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSS 747

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR-DVVSWSTMIR 145
              G+ IH        D D   SN LI MY++CG + S+  +FDEM  R +VVSW+++I 
Sbjct: 748 LREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSWNSLIN 807

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           GY + G  E+AL++   MR   I P E+  + +++  +    V  G+ I
Sbjct: 808 GYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856


>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
           [Vitis vinifera]
          Length = 807

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 216/673 (32%), Positives = 366/673 (54%), Gaps = 56/673 (8%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYA 60
           +K   G  ++ + RQ H H++K         +++ ++  NSL+T Y K      A+ ++ 
Sbjct: 116 IKAFGGLCDVYKGRQIHGHVLKL-------GVLDDVSVVNSLLTMYWKCGVVEDAVQMFE 168

Query: 61  FMRKNGSEVD---------------NFT----------------------IPTILKACAQ 83
            M     EVD               ++T                      + +IL   + 
Sbjct: 169 KM----PEVDLVSWNTMISGFQKSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSL 224

Query: 84  VLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVS---- 139
             +TH G+EIHG  +K+GLD + Y+ ++LI+MY +CGS+ +A  +F+ + ++D V     
Sbjct: 225 QSLTH-GREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAV 283

Query: 140 -WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACV 198
            W+ MI GY   G   +AL +  +M    I+P    M+S+ SL ++  D+  GK IH  +
Sbjct: 284 IWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLI 343

Query: 199 VRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE 258
            +     K  + + TAL+DMY KCG++    ++F R   ++++ W+ +IS   +     +
Sbjct: 344 FKF--GLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTK 401

Query: 259 GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
            + LF E   E+       +++++  C  +     G  +H    + GF   + + +ALVD
Sbjct: 402 ALELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVD 461

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
           +Y KCR++  ++ +F  +  KD++ WNA+IS YAQ  C D+A + F  M++ ++RPN VT
Sbjct: 462 LYAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVT 521

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
           +  +LS+C     + + K +H Y+ +QGL   V++  +L+  YAKCGD+N +   F +  
Sbjct: 522 IACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMP 581

Query: 439 YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKS 498
            R+   WN+++ G GMH   +E ++ F  M  SG+KP+ +TF  +L+ACSHAG V EG  
Sbjct: 582 ERNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCK 641

Query: 499 VFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            F  MV    L P++E Y CMVDLLGRAG L++A+++I +MP  P+  +WG+LL + K H
Sbjct: 642 YFKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNH 701

Query: 559 KNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSS 618
            +  + EI A  I ++ P + GY VL++N+Y    +  + + VR  +K++ +KK+PG S 
Sbjct: 702 GDEILAEIVANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKKPGCSW 761

Query: 619 VEVNGLVHKFIRG 631
           +EV+   H FI G
Sbjct: 762 IEVDNNFHIFIAG 774



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 158/527 (29%), Positives = 283/527 (53%), Gaps = 13/527 (2%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT-IPTILKACAQVLMTHLGKEIHGFAI 98
           N+++  Y ++     A+ +Y  M  +G +V+ F   P ++KA   +   + G++IHG  +
Sbjct: 77  NNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQIHGHVL 136

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+  D  V N+L+ MY +CG +  A  +F++MP  D+VSW+TMI G+ +      +L 
Sbjct: 137 KLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDYTRSLM 196

Query: 159 VMREMRF-MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
             R M +   I P+ VA +S +   + +  +  G+ IH  VV++  D  +   + ++LI+
Sbjct: 197 FFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLD--VEEYLVSSLIE 254

Query: 218 MYSKCGNLAYAKQLFNR-LNQNSV----VSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           MY KCG++  A+ +FN  L+++SV    V W VMISGY+     ++ + LF +M+   + 
Sbjct: 255 MYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVWGIK 314

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P   T++SL   C     +  GK +H  I + G + ++ +  AL+DMY KC ++ +   +
Sbjct: 315 PDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTGLKI 374

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F   ++ ++++W+AVIS  AQ+ C  KA ELF   K+     +   +V +L  C+     
Sbjct: 375 FRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLRACSSLTLK 434

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
             G  +H    K G   DV + +ALVD+YAKC D+  + ++F     +D+  WNA+++GY
Sbjct: 435 PEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVSWNALISGY 494

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVP 511
               C +EAL  F DM+   ++PN +T   +L+ C+H  ++T  K V   ++  GLG   
Sbjct: 495 AQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEVHGYLIRQGLGSTV 554

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            + +   ++    + G ++ +    + MP R N + W +++    +H
Sbjct: 555 LVSN--SLIATYAKCGDINSSLYTFEKMPER-NDVSWNSIILGMGMH 598


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 223/612 (36%), Positives = 328/612 (53%), Gaps = 25/612 (4%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           FS+T +I  L ++           +   A +++  M + G   +  T  +IL A A   +
Sbjct: 198 FSWTVMIGGLAQHG----------RGQEAFSLFLQMERGGCLPNLTTYLSILNASA---I 244

Query: 87  THLG-----KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWS 141
           T  G     KE+H  A K G   D  V NALI MY++CGS+  AR +FD M +RDV+SW+
Sbjct: 245 TSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWN 304

Query: 142 TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH--ACVV 199
            MI G  + G   EA  +  +M+     P     +S+++        +  K +H  A  V
Sbjct: 305 AMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEV 364

Query: 200 RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
               D ++G    +A + MY +CG++  A+ +F++L   +V +W  MI G  +     E 
Sbjct: 365 GLVSDLRVG----SAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREA 420

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
           + LF +M  E  FP   T ++++        L+  K +H+Y +  G    L + NALV M
Sbjct: 421 LSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHM 479

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
           Y KC     A+ +FD M  ++V  W  +IS  AQ  C  +AF LF+ M    + P+  T 
Sbjct: 480 YAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTY 539

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
           V +LS C   GALE  K +H++    GL  D+ +  ALV MYAKCG V+ A R+F + + 
Sbjct: 540 VSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLE 599

Query: 440 RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           RD+  W  M+ G   HG G +AL  FV M+  G KPNG +F+ +L+ACSHAGLV EG+  
Sbjct: 600 RDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQ 659

Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK 559
           F  +    G+ P +EHY CMVDLLGRAG L+EA   I +MP+ P    WGALL A   + 
Sbjct: 660 FLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYG 719

Query: 560 NPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           N  M E AA + L+++P++    VL+SNIYA    W     VR +M+   ++KEPG S +
Sbjct: 720 NLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWI 779

Query: 620 EVNGLVHKFIRG 631
           EV+  +H F+ G
Sbjct: 780 EVDNQIHSFVVG 791



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 146/447 (32%), Positives = 234/447 (52%), Gaps = 4/447 (0%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           ++  Y +      A+ +Y+ MR+ G + +  T  +ILKAC   +    GK+IH   I++G
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
              D  V  AL+ MY +CGS+  A+ +FD+M  R+V+SW+ MI G    G  +EA     
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
           +M+     P+    +S+++  A    ++  K +H+  V       L + +  AL+ MY+K
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVN--AGLALDLRVGNALVHMYAK 178

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
            G++  A+ +F+ + +  + SWTVMI G  +     E   LF +M      P+  T LS+
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSI 238

Query: 282 IIECGF--VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           +        G L+  K +H +  + GF   L + NAL+ MY KC  I  AR +FDGM  +
Sbjct: 239 LNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDR 298

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           DV+ WNA+I   AQ  C  +AF +F+ M+     P+  T + LL+     GA E  K +H
Sbjct: 299 DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVH 358

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
            +  + GL  D+ + +A V MY +CG ++ A  +F +   R++  WNAM+ G     CG 
Sbjct: 359 KHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGR 418

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNA 486
           EAL  F+ M R G  P+  TF+ +L+A
Sbjct: 419 EALSLFLQMRREGFFPDATTFVNILSA 445



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 153/500 (30%), Positives = 243/500 (48%), Gaps = 26/500 (5%)

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           MI GY   G  E+A++V  +MR    +P+E+  +S++        +  GK IHA ++++ 
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
                 V + TAL++MY KCG++  A+ +F+++ + +V+SWTVMI G        E    
Sbjct: 61  FQSD--VRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHR 118

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F +M  E   P+  T +S++      G L+  K +H++ +  G    L + NALV MY K
Sbjct: 119 FLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK 178

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
              I  AR +FDGM  +D+  W  +I   AQ     +AF LF+ M+     PN  T + +
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSI 238

Query: 383 L--SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
           L  S  T  GALE  K +H +  K G   D+ +  AL+ MYAKCG ++ A  +F     R
Sbjct: 239 LNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDR 298

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           D+  WNAM+ G   +GCG EA   F+ M++ G  P+  T++ LLN     G     K V 
Sbjct: 299 DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVH 358

Query: 501 DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
              V  +GLV  +      V +  R G +D+A  +   + +R N+  W A++      K 
Sbjct: 359 KHAVE-VGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMIGGVAQQK- 415

Query: 561 PSMGEIAATQILEIEPQNY------GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKK-E 613
              G  A +  L++  + +        N+L +N+   A  W         +KE+     +
Sbjct: 416 --CGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEW---------VKEVHSYAID 464

Query: 614 PGFSSVEV-NGLVHKFIRGG 632
            G   + V N LVH + + G
Sbjct: 465 AGLVDLRVGNALVHMYAKCG 484



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 199/399 (49%), Gaps = 21/399 (5%)

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
           MI GY       + ++++++M  E   P+EIT LS++  C     L+ GK +HA+I+++G
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
           F+  + +  ALV+MY KC  I  A+ +FD M  ++V+ W  +I   A      +AF  F+
Sbjct: 61  FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            M+     PN  T V +L+    AGALE  K +H++    GL +D+ +  ALV MYAK G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
            ++ A  +F   + RDI  W  M+ G   HG G+EA   F+ MER G  PN  T++ +LN
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240

Query: 486 ACSHAGLVTEGKSVFDKMVH----GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
           A   + + + G   + K VH      G +  +     ++ +  + G +D+A  +   M  
Sbjct: 241 A---SAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCD 297

Query: 542 RPNMIVWGALLAASKLHKNPSMGEIAATQILEIE-----PQNYGYNVLMSNIYAVANRWN 596
           R ++I W A++    L +N   G  A T  L+++     P +  Y  L+ N +     W 
Sbjct: 298 R-DVISWNAMIGG--LAQN-GCGHEAFTIFLKMQQEGFVPDSTTYLSLL-NTHVSTGAWE 352

Query: 597 DVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
            V  V +   E+ +  +    S      VH +IR G ++
Sbjct: 353 WVKEVHKHAVEVGLVSDLRVGS----AFVHMYIRCGSID 387


>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Cucumis sativus]
          Length = 743

 Score =  385 bits (990), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/591 (32%), Positives = 345/591 (58%), Gaps = 5/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++ SY +      A +++  MR++G +  + T+ ++L   +++ +      +    I
Sbjct: 118 WTTIIGSYSREGDIDIAFSMFKQMRESGIQPTSVTLLSLLPGISKLPLLLCLHCL---II 174

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +G + D  +SN+++ MY +CG +  AR LF  +  RD+VSW++++  Y + G  EE L+
Sbjct: 175 LHGFESDLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQ 234

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +++ M+  DI+P +    S +S  A   D+ LGK +H  ++++     +   + +AL+ +
Sbjct: 235 LLQAMKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKD--GLNIDQHVESALVVL 292

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y +C  L  A ++F    +  VV WT MISG ++ +  ++ + +F +MIE NV PS  T+
Sbjct: 293 YLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATL 352

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +  C  +G   +G  +H Y+LR G    +   N+LV MY KC +++ + ++F+ M  
Sbjct: 353 ASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVE 412

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD++ WNA+++ +A+   + K    F  M+ S +RP+ +T+  LL  C  AGAL  GKW+
Sbjct: 413 KDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWI 472

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ +  L   ++ +TALVDMY KCG++  A + F   + RD+  W+ ++ GYG +G G
Sbjct: 473 HNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKG 532

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           E AL  + +   +G++PN + FI +L+ACSH GL+++G S+++ M     + P +EH  C
Sbjct: 533 EIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRAC 592

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VDLL RAG +DEA+   K M   P+++V G LL A +++    +G++ A  + E++P +
Sbjct: 593 VVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVD 652

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            G  V ++N YA  +RW+ V      M+ + +KK PG+SS+EV+G    F 
Sbjct: 653 PGNFVQLANSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSIEVHGTTFTFF 703



 Score =  290 bits (742), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 164/549 (29%), Positives = 298/549 (54%), Gaps = 11/549 (2%)

Query: 27  FSYTNIINPLTR-YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVL 85
           F + +I +  T+ +NSLV+           L  Y  M+K  +++D +T P++ KAC  + 
Sbjct: 4   FIHESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLN 63

Query: 86  MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIR 145
           +   G  +H   + NGL  D+Y+ ++LI  Y++ G +   R +FD M  R+VV W+T+I 
Sbjct: 64  LFSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIG 123

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
            Y R G  + A  + ++MR   I+P+ V   +++SL   ++ + L   +H  ++ +  + 
Sbjct: 124 SYSREGDIDIAFSMFKQMRESGIQPTSV---TLLSLLPGISKLPLLLCLHCLIILHGFES 180

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
            L  A++ ++++MY KCG +A A++LF  ++   +VSW  ++S Y +     E ++L   
Sbjct: 181 DL--ALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQA 238

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M  E++ P + T  S +      G L+LGK +H  +L++G      + +ALV +Y +CR 
Sbjct: 239 MKIEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRC 298

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           +  A  +F     KDV++W A+IS   Q  C DKA  +F  M  S V+P+  T+   L+ 
Sbjct: 299 LDPAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAA 358

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
           C + G  ++G  +H Y+ +QG+ +D+  + +LV MYAKC  +  +  +F++ + +D+  W
Sbjct: 359 CAQLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSW 418

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           NA++AG+  +G   + + FF +M +S ++P+ IT   LL AC  AG + +GK + + ++ 
Sbjct: 419 NAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLR 478

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
              L+P I     +VD+  + G L+ A +    M L+ +++ W  L+     +     GE
Sbjct: 479 S-SLIPCIMTETALVDMYFKCGNLENAQKCFDCM-LQRDLVAWSTLIVGYGFNGK---GE 533

Query: 566 IAATQILEI 574
           IA  +  E 
Sbjct: 534 IALRKYSEF 542



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 5/199 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N++V  + KN   S  +  +  MRK+    D+ T+ ++L+AC        GK IH 
Sbjct: 415 LVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHN 474

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F +++ L        AL+ MY +CG+L +A+  FD M  RD+V+WST+I GY   G  E 
Sbjct: 475 FVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEI 534

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA--T 213
           AL    E     + P+ V  IS++S  +    +  G +I+  +    KD ++   +    
Sbjct: 535 ALRKYSEFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMT---KDFRMSPNLEHRA 591

Query: 214 ALIDMYSKCGNLAYAKQLF 232
            ++D+ S+ G +  A   +
Sbjct: 592 CVVDLLSRAGKVDEAYSFY 610


>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Cucumis sativus]
          Length = 681

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 217/588 (36%), Positives = 327/588 (55%), Gaps = 39/588 (6%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMP 133
           ++L+AC  +      KEIH   I  GL  D +  + L+     SE  +L     + +   
Sbjct: 59  SLLEACTSMAKM---KEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAA 115

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGK 192
           N +V SW+  IRGY     P  A+ + R M R     P       +  + A  +      
Sbjct: 116 NLNVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTAN 175

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
            I   V++   D  L V    A+I +   CG L  A++LF+      +VSW  +I+GY+R
Sbjct: 176 EILGHVIQLGFDSDLFVH--NAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVR 233

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
           C   +E   L+ +M E NV P E+T++ ++     +  L LG+ LH  I   G   ++ +
Sbjct: 234 CGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPL 293

Query: 313 ANALVDMYGKCREIRSARTLFDGM-------------------------------KSKDV 341
           ANAL+DMY KC+ I +A+ LF+ M                                 KDV
Sbjct: 294 ANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDV 353

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           ++WNA+I  + QA    +A  LF  M+ S V P+++T+V  LS C++ GAL++G W+H Y
Sbjct: 354 VLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHY 413

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
           ++K  L ++V L TALVDMYAKCG++  A ++F E   R+   W A++ G  +HG    A
Sbjct: 414 VDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAA 473

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVD 521
           + +F +M   G+ P+ ITFIG+L+AC H GLV +G+  F +M    G+ PK++HY C+VD
Sbjct: 474 ISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVD 533

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGY 581
           LLGRAG L+EA E+I+SMP  P+ +VWGAL   S++H N  MGE AA+++LE++P + G 
Sbjct: 534 LLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGI 593

Query: 582 NVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            VL++N+Y  AN W     VR++M+E  V+K PG SS+E+NGLV+ FI
Sbjct: 594 YVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFI 641



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 163/540 (30%), Positives = 270/540 (50%), Gaps = 59/540 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +N  +  Y+++  P +A+ +Y  M + GS + DN+T P + K CA   ++    EI G  
Sbjct: 122 WNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHV 181

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           I+ G D D +V NA+I +   CG L++AR LFDE   RD+VSW+++I GY R GL +EA 
Sbjct: 182 IQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAF 241

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIAT 213
           ++  +M  +++ P EV MI +VS  A + ++ LG+ +H  +      E++G    V +A 
Sbjct: 242 DLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSI------EEMGLNLTVPLAN 295

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF- 272
           AL+DMY KC N+  AK LF  + + +VVSWT M+ GY +   +   VRLF EM E++V  
Sbjct: 296 ALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVL 355

Query: 273 ------------------------------PSEITILSLIIECGFVGGLQLGKWLHAYIL 302
                                         P +IT+++ +  C  +G L +G W+H Y+ 
Sbjct: 356 WNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVD 415

Query: 303 RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
           ++    ++A+  ALVDMY KC  I+ A  +F+ M  ++ + W A+I   A       A  
Sbjct: 416 KHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAIS 475

Query: 363 LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-WLHTYIEKQGLEVDVILKTALVDMY 421
            F  M    + P+E+T +G+LS C   G ++ G+ + +    K G+   +   + LVD+ 
Sbjct: 476 YFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLL 535

Query: 422 AKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHG---CGEEALIFFVDMERSGVKPNG 477
            + G +  A  L     +  D  +W A+  G  +HG    GE A    ++++      +G
Sbjct: 536 GRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPH----DG 591

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVP---KIEHYGCMVDLLGRAGLLDEAH 533
             ++ L N    A +  + + V   M   G+   P    IE  G + D + R    D++H
Sbjct: 592 GIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIR----DKSH 647



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 200/413 (48%), Gaps = 44/413 (10%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  +NS++  Y++      A ++Y  M +     D  T+  ++ A AQ+    LG++
Sbjct: 218 VRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRK 277

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H    + GL+    ++NAL+ MY +C ++ +A+ LF+ M  + VVSW+TM+ GY + GL
Sbjct: 278 LHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGL 337

Query: 153 -----------PE--------------------EALEVMREMRFMDIRPSEVAMISMVSL 181
                      PE                    EAL +  EM+   + P ++ +++ +S 
Sbjct: 338 LESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSA 397

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
            + +  +D+G  +H  V ++  +  + VA+ TAL+DMY+KCGN+  A Q+F  +   + +
Sbjct: 398 CSQLGALDVGIWMHHYVDKH--NLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSL 455

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK-WLHAY 300
           +WT +I G     + +  +  F+EMI   + P EIT + ++  C   G +  G+ + +  
Sbjct: 456 TWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQM 515

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVI---SAYAQAHC 356
             + G    L   + LVD+ G+   +  A  L   M    D ++W A+      +   H 
Sbjct: 516 TSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHM 575

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLS-LCTEAGALEMGKWLHTYIEKQGLE 408
            ++A       K+ ++ P++  +  LL+ +  +A   E  + +   +E++G+E
Sbjct: 576 GERAAS-----KLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVE 623


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 197/535 (36%), Positives = 312/535 (58%), Gaps = 31/535 (5%)

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           +F+ +   +++ W+TM RG+     P  AL++   M  + + P+      ++   A +  
Sbjct: 19  VFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKA 78

Query: 188 VDLGKAIHACVVR----------------NCKDEKL-------------GVAIATALIDM 218
              G  IH  V++                  ++E+L              V   TAL+  
Sbjct: 79  SKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTG 138

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+  G +  A+ +F+ +    VVSW  MISGY+      E + LF EM++ NV P E T+
Sbjct: 139 YASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTM 198

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +++I      G ++LG+ +H++I  +GF  +L + NAL+D Y KC E+ +A  LF G+  
Sbjct: 199 VTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSY 258

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KDV+ WN +I  Y   +   +A  LF  M  S   PN+VTM+ +L  C   GA+++G+W+
Sbjct: 259 KDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWI 318

Query: 399 HTYIEK--QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
           H YI+K  +G+     L+T+L+DMY+KCGD+  A+++F+  +++ +  WNAM+ G+ MHG
Sbjct: 319 HVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHG 378

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
               A   F  M ++ +KP+ ITF+GLL+ACSHAG++  G+ +F  M H   + PK+EHY
Sbjct: 379 RANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHY 438

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
           GCM+DLLG +GL  EA EMI +M + P+ ++W +LL A K+H N  +GE  A  + +IEP
Sbjct: 439 GCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEP 498

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            N G  VL+SNIYA A RWN+VA +R ++ +  +KK PG SS+E++ +VH+FI G
Sbjct: 499 NNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVHEFIIG 553



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 153/495 (30%), Positives = 258/495 (52%), Gaps = 52/495 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++   +  +  P SAL +Y  M   G   +++T P +LK+CA++  +  G +IHG  +
Sbjct: 31  WNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVL 90

Query: 99  KNGLDGDAYVSNALIQM-------------------------------YSECGSLVSARY 127
           K G + D YV  +LI M                               Y+  G + SAR 
Sbjct: 91  KLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARN 150

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           +FDE+P +DVVSW+ MI GY   G  +EALE+ +EM   ++RP E  M++++S  A    
Sbjct: 151 MFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGS 210

Query: 188 VDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           ++LG+ +H+ +     D   G  + I  ALID YSKCG +  A  LF  L+   V+SW +
Sbjct: 211 IELGRQVHSWIA----DHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNI 266

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR-- 303
           +I GY   N   E + LF EM+     P+++T+LS++  C  +G + +G+W+H YI +  
Sbjct: 267 LIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRL 326

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
            G   + ++  +L+DMY KC +I +A  +F+ M  K +  WNA+I  +A     + AF++
Sbjct: 327 KGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDI 386

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL-----HTYIEKQGLEVDVILKTALV 418
           F  M+ ++++P+++T VGLLS C+ AG L++G+ +     H Y     LE        ++
Sbjct: 387 FSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLE----HYGCMI 442

Query: 419 DMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
           D+    G    A  + S   +  D  +W +++    MHG  E    F  ++ +  ++PN 
Sbjct: 443 DLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNLFK--IEPNN 500

Query: 478 I-TFIGLLNACSHAG 491
             +++ L N  + AG
Sbjct: 501 PGSYVLLSNIYATAG 515



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 197/398 (49%), Gaps = 39/398 (9%)

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           L YA  +F  + + +++ W  M  G+    +    ++L+  MI   + P+  T   L+  
Sbjct: 13  LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE------------------- 325
           C  +   + G  +H ++L+ G+E  L +  +L+ MY +                      
Sbjct: 73  CAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSY 132

Query: 326 ------------IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
                       I SAR +FD +  KDV+ WNA+IS Y +     +A ELF  M  + VR
Sbjct: 133 TALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVR 192

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           P+E TMV ++S    +G++E+G+ +H++I   G   ++ +  AL+D Y+KCG++  A  L
Sbjct: 193 PDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGL 252

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F    Y+D+  WN ++ GY      +EAL+ F +M RSG  PN +T + +L+AC+H G +
Sbjct: 253 FLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAI 312

Query: 494 TEGKSV---FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
             G+ +    DK + G+     +     ++D+  + G ++ AH++  SM L  ++  W A
Sbjct: 313 DIGRWIHVYIDKRLKGVTNASSLR--TSLIDMYSKCGDIEAAHQVFNSM-LHKSLPAWNA 369

Query: 551 LLAASKLH--KNPSMGEIAATQILEIEPQNYGYNVLMS 586
           ++    +H   N +    +  +  EI+P +  +  L+S
Sbjct: 370 MIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLS 407



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 163/320 (50%), Gaps = 2/320 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +N++++ Y++      AL ++  M K     D  T+ T++ A A+     LG++
Sbjct: 157 VKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQ 216

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H +   +G   +  + NALI  YS+CG + +A  LF  +  +DV+SW+ +I GY    L
Sbjct: 217 VHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIGGYTHLNL 276

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            +EAL + +EM      P++V M+S++   A +  +D+G+ IH  + +  K      ++ 
Sbjct: 277 YKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 336

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T+LIDMYSKCG++  A Q+FN +   S+ +W  MI G+      N    +F+ M +  + 
Sbjct: 337 TSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIK 396

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSART 331
           P +IT + L+  C   G L LG+ +   +  N      L     ++D+ G     + A  
Sbjct: 397 PDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEE 456

Query: 332 LFDGMK-SKDVMIWNAVISA 350
           +   M    D +IW +++ A
Sbjct: 457 MISTMTMEPDGVIWCSLLKA 476


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 201/602 (33%), Positives = 349/602 (57%), Gaps = 4/602 (0%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           F +      +  +NS ++  ++N     AL+++  M+ +G  ++++T   +L+ CA++  
Sbjct: 221 FEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQ 280

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
            + G+E+H   +K G + +    NAL+ MY+ CG + SA  +F E+ ++D +SW++M+  
Sbjct: 281 LNHGRELHAALLKCGTEFNIQC-NALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSC 339

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           Y +  L  EA++   EM      P    ++S++S    +  +  G+ +HA  V+   D  
Sbjct: 340 YVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSD 399

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
           L   IA  L+DMY KC ++  + ++F+R+     VSWT +I+ Y + +  +E +  F   
Sbjct: 400 L--QIANTLMDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTA 457

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
            +E +    + + S++  C  +  + L K +H+Y +RNG    L + N ++D+YG+C E+
Sbjct: 458 QKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILKNRIIDIYGECGEV 516

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             A  +F+ +  KD++ W ++++ +A+   + +A  LF  M  + ++P+ V +VG+L   
Sbjct: 517 CYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAI 576

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
               +L  GK +H ++ +    V+  + ++LVDMY+ CG +N A ++F EA  +D+ +W 
Sbjct: 577 AGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCKDVVLWT 636

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           AM+   GMHG G++A+  F  M  +GV P+ ++F+ LL ACSH+ LV EGK   D MV  
Sbjct: 637 AMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSK 696

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
             L P  EHY C+VDLLGR+G  +EA++ IKSMPL P  +VW ALL A ++HKN  +  I
Sbjct: 697 YKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRIHKNHELAMI 756

Query: 567 AATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVH 626
           A  ++LE+EP N G  VL+SN++A   +WN+V  +R  M E  ++K+P  S +E+   VH
Sbjct: 757 ATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACSWIEIGNTVH 816

Query: 627 KF 628
            F
Sbjct: 817 TF 818



 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 154/558 (27%), Positives = 294/558 (52%), Gaps = 21/558 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKN----GSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           +N+L+ + + +     A+ +Y  MR +    G+  D  T+ ++LKAC        G E+H
Sbjct: 127 WNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVH 186

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN-RDVVSWSTMIRGYHRGGLP 153
           G A+K+GLD    V+NAL+ MY++CG L SA  +F+ M + RDV SW++ I G  + G+ 
Sbjct: 187 GLAVKSGLDRSTLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMF 246

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            EAL++ R M+      +    + ++ + A++A ++ G+ +HA +++   +  +      
Sbjct: 247 LEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNIQC---N 303

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+ MY++CG +  A ++F  +     +SW  M+S Y++     E +  F EM++    P
Sbjct: 304 ALLVMYARCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNP 363

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
               I+SL+   G +G L  G+ +HAY ++   +  L +AN L+DMY KC  +  +  +F
Sbjct: 364 DHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVF 423

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           D M+ KD + W  +I+ YAQ+    +A   F   +   ++ + + M  +L  C+   ++ 
Sbjct: 424 DRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSIS 483

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           + K +H+Y  + GL +D+ILK  ++D+Y +CG+V  A  +F     +DI  W +M+  + 
Sbjct: 484 LLKQVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFA 542

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +G   EA+  F  M  +G++P+ +  +G+L A +    +T+GK      +HG  +  K 
Sbjct: 543 ENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKGKE-----IHGFLIRGKF 597

Query: 514 EHYGC----MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
              G     +VD+    G ++ A ++      + ++++W A++ A+ +H +         
Sbjct: 598 PVEGAVVSSLVDMYSGCGSMNYALKVFDEAKCK-DVVLWTAMINATGMHGHGKQAIYIFK 656

Query: 570 QILE--IEPQNYGYNVLM 585
           ++LE  + P +  +  L+
Sbjct: 657 RMLETGVSPDHVSFLALL 674



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 196/407 (48%), Gaps = 11/407 (2%)

Query: 90  GKEIHGFAIKNGLDGD---AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
           G+++H  A+  G  GD    +++  L+ MY +CG L  A  LFD MP R V SW+ +I  
Sbjct: 74  GRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGA 133

Query: 147 YHRGGLPEEALEVMREMRFMD----IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
               G   EA+ V R MR  +      P    + S++       D   G  +H   V++ 
Sbjct: 134 CLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSG 193

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL-NQNSVVSWTVMISGYIRCNEINEGVR 261
            D      +A AL+ MY+KCG L  A ++F  + +   V SW   ISG ++     E + 
Sbjct: 194 LDRS--TLVANALVGMYAKCGLLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALD 251

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           LF  M  +    +  T + ++  C  +  L  G+ LHA +L+ G EF++   NAL+ MY 
Sbjct: 252 LFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAALLKCGTEFNI-QCNALLVMYA 310

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           +C  + SA  +F  +  KD + WN+++S Y Q     +A + F  M  +   P+   +V 
Sbjct: 311 RCGWVDSALRVFREIGDKDYISWNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVS 370

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           LLS     G L  G+ +H Y  KQ L+ D+ +   L+DMY KC  V  + R+F     +D
Sbjct: 371 LLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTLMDMYIKCYSVECSARVFDRMRIKD 430

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
              W  ++A Y       EA+  F   ++ G+K + +    +L ACS
Sbjct: 431 HVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDPMMMGSILEACS 477


>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
 gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 211/599 (35%), Positives = 339/599 (56%), Gaps = 7/599 (1%)

Query: 26  KFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIY-AFMRKNGSEVDNFTIPTILKACAQ 83
           +  +  I NP L  +  ++  Y  N+  S  +  Y   +RK  +E DN     +LKAC++
Sbjct: 91  RLMFDRIRNPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSE 150

Query: 84  VLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTM 143
           +  T  G+++H   +K G   D++V   L+ MY++C  +  +R +FDE+ +R+VV W++M
Sbjct: 151 LRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSM 209

Query: 144 IRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
           I GY +    +E L +   MR   +  ++  + S+V+    +  +  GK +H  V+++  
Sbjct: 210 IVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGF 269

Query: 204 DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
           D  L   + T L+D+Y KCG++  A  +F+ L+   +VSWT MI GY +     E ++LF
Sbjct: 270 D--LNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLF 327

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
            +   +++ P+ +T  S++  C   G L +G+ +H   ++ G E      NALVDMY KC
Sbjct: 328 TDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSE-DATFENALVDMYAKC 386

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
             I  AR +F+ +  KDV+ WN++IS Y Q     +A ELF  M+   V P+ +T+V +L
Sbjct: 387 HMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVL 446

Query: 384 SLCTEAGALEMGKWLHTYIEKQGL-EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           S C   GA  +G  LH Y  K GL    V + TAL++ YAKCGD   A  +F E   ++ 
Sbjct: 447 SACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNT 506

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             W+AM+ GYG+ G    +L  F DM +  ++PN + F  +L+ACSH+G++ EG   F+ 
Sbjct: 507 ITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNT 566

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
           M      VP ++HY CMVDLL RAG L+EA + I+ +P++P++ + GA L   +LH    
Sbjct: 567 MCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFD 626

Query: 563 MGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
           +GE+A  ++LE+ P    Y VLMSN+YA   RW+    V  +MK+  + K PG+S V++
Sbjct: 627 LGEVAVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSLVDI 685



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 157/543 (28%), Positives = 270/543 (49%), Gaps = 21/543 (3%)

Query: 56  LNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG--------KEIHGFAIKNGLDGDAY 107
           L + A  R    E+D  TI +I    +    + LG        ++IH   + +GL  D  
Sbjct: 16  LTVTALQRT--PEIDR-TIASIQSISSNPCFSLLGICKTVSSLRKIHALLVVHGLSEDLL 72

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
               L+ +Y   G +  AR +FD + N D+ SW  MIR Y       E ++         
Sbjct: 73  CETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKC 132

Query: 168 IRPSEVAMISMV-SLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLA 226
           +   +  + S+V    +++ + D G+ +H  +V+    +     + T L+DMY+KC  + 
Sbjct: 133 LNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVGSPDSF---VLTGLVDMYAKCREVE 189

Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
            ++++F+ +   +VV WT MI GY++ + + EG+ LF  M E  V  ++ T+ SL+  C 
Sbjct: 190 DSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACT 249

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
            +G L  GKW+H Y++++GF+ +  +   L+D+Y KC +IR A ++FD + + D++ W A
Sbjct: 250 KLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTA 309

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           +I  YAQ     +A +LF   +   + PN VT   +LS C + G+L MG+ +H    K G
Sbjct: 310 MIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLG 369

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
            E D   + ALVDMYAKC  +  A  +F     +D+  WN++++GY  +G   EAL  F 
Sbjct: 370 SE-DATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFD 428

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG-CMVDLLGR 525
            M    V P+ IT + +L+AC+  G    G S+    +   GL+    + G  +++   +
Sbjct: 429 QMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKA-GLLSGSVYVGTALLNFYAK 487

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG-EIAATQILE-IEPQNYGYNV 583
            G  + A  +   M    N I W A++    +  + S   E+    + E +EP    +  
Sbjct: 488 CGDAESARVIFDEMG-EKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTT 546

Query: 584 LMS 586
           ++S
Sbjct: 547 ILS 549


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/596 (33%), Positives = 332/596 (55%), Gaps = 4/596 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + S+++ Y +  +  +A+ +Y  M ++G   D+FT  +I+K+C+ +    L +++H 
Sbjct: 164 VVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHA 223

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K+    D    NALI MY++   +  A  +F  +  +D++SW +MI G+ + G   E
Sbjct: 224 HVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELE 283

Query: 156 ALEVMREMRFMDI-RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           AL   REM    + +P+E    S  S  + + + D G+ IH   ++      L      +
Sbjct: 284 ALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAG--CS 341

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L DMY+KCG L  A+ +F  + +  +V+W  +I+G+   +   E    F++M    + P+
Sbjct: 342 LCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPN 401

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           ++T+LSL+  C     L  G  +H+YI++ GF   + + N+L+ MY KC  +  A  +F+
Sbjct: 402 DVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFE 461

Query: 335 GMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
            + +K D++ WN +++A  Q +   +   L   M  S+++P+ VT+  +L    +  + E
Sbjct: 462 DIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYE 521

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           +G  +H +I K GL +D+ +  AL++MY KCG +  A ++F      DI  W++++ GY 
Sbjct: 522 VGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYA 581

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
             GCG+EA   F  M   GVKPN ITF+G+L ACSH G+V EG  ++  M     + P  
Sbjct: 582 QAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTK 641

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EH  CMVDLL RAG LD A + IK MP  P+++VW  LLAA K+H N  +G+ AA  +L+
Sbjct: 642 EHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLK 701

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           I+P N    V++ NI+A +  W D A +R  M+ + V K PG S +E+   VH F+
Sbjct: 702 IDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFL 757



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 152/544 (27%), Positives = 268/544 (49%), Gaps = 19/544 (3%)

Query: 18  AHI-IKTHFKFSYTNIINPLT---RYNSLVTSYIKNNKPSSALNIYAFMRK-NGSEVDNF 72
           +HI + T   FS      PLT    ++  + S  K N    AL  +   +K + S + + 
Sbjct: 44  SHIRLNTQLAFSPC----PLTVHYPHDDKIISLCKKNLHREALKAFDIFQKCSSSPLKSV 99

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           T   ++ AC+ +     G++IH   +      D  + N ++ MY +CGSL  AR +FD M
Sbjct: 100 TYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSM 159

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           P ++VVSW++MI GY R G  + A+ +  +M      P      S+V   + + D  L +
Sbjct: 160 PLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLAR 219

Query: 193 AIHACVVRNCKDEKLGVAI--ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
            +HA V+++    + G  +    ALI MY+K   +A A  +F+R+    ++SW  MI+G+
Sbjct: 220 QLHAHVLKS----EFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGF 275

Query: 251 IRCNEINEGVRLFAEMIEENVF-PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
            +     E +  F EM+ ++V+ P+E    S    C  +     G+ +H   ++ G    
Sbjct: 276 SQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSD 335

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           L    +L DMY KC  + SART+F  ++  D++ WNA+I+ +A      ++   F  M+ 
Sbjct: 336 LFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRH 395

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
           + + PN+VT++ LL  C+E   L  G  +H+YI K G  +D+ +  +L+ MY+KC ++N 
Sbjct: 396 TGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLND 455

Query: 430 AYRLFSEAIYR-DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
           A ++F +   + DI  WN ++          E L     M  S +KP+ +T   +L +  
Sbjct: 456 ALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSG 515

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
                  G  +   ++   GL   I     ++++  + G L+ A +M  S+   P++I W
Sbjct: 516 QIASYEVGSQIHCFIMKS-GLNLDISVSNALINMYTKCGSLECARKMFDSIG-NPDIISW 573

Query: 549 GALL 552
            +L+
Sbjct: 574 SSLI 577



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 219/448 (48%), Gaps = 16/448 (3%)

Query: 149 RGGLPEEALEVMREMRFMDIRP-SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
           +  L  EAL+     +     P   V    +++  + +  ++ G+ IH  ++  C  +  
Sbjct: 74  KKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHML-TCNYQP- 131

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            + +   ++ MY KCG+L  A+ +F+ +   +VVSWT MISGY R  E +  + L+ +M+
Sbjct: 132 DMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQML 191

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
                P   T  S++  C  +   +L + LHA++L++ F   L   NAL+ MY K  ++ 
Sbjct: 192 RSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMA 251

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK----VSKVRPNEVTMVGLL 383
            A  +F  +  KD++ W ++I+ ++Q   +    E   H +     S  +PNE       
Sbjct: 252 DAINVFSRIIIKDLISWGSMIAGFSQ---LGYELEALCHFREMLSQSVYQPNEFVFGSAF 308

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
           S C++    + G+ +H    K GL  D+    +L DMYAKCG +  A  +F      D+ 
Sbjct: 309 SACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLV 368

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            WNA++AG+      +E+  FF  M  +G+ PN +T + LL ACS   ++  G  V   +
Sbjct: 369 AWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYI 428

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
           V  +G    I     ++ +  +   L++A ++ + +  + +++ W  LL A  L +N + 
Sbjct: 429 VK-MGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTAC-LQQNQAG 486

Query: 564 GEIAATQIL---EIEPQNYGY-NVLMSN 587
             +  T+++    I+P +    NVL+S+
Sbjct: 487 EVLRLTKLMFASRIKPDHVTLTNVLVSS 514



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 183/356 (51%), Gaps = 24/356 (6%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSY--IKNNKPSSALNI 58
           M  K GFL  E  R    HI K             L  +N+++  +  + N K SS+   
Sbjct: 345 MYAKCGFL--ESARTVFYHIEKPD-----------LVAWNAIIAGFASVSNAKESSSF-- 389

Query: 59  YAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSE 118
           ++ MR  G   ++ T+ ++L AC++ +M + G ++H + +K G + D  V N+L+ MYS+
Sbjct: 390 FSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSK 449

Query: 119 CGSLVSARYLFDEMPNR-DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMIS 177
           C +L  A  +F+++ N+ D+VSW+T++    +     E L + + M    I+P  V + +
Sbjct: 450 CSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTN 509

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
           ++     +A  ++G  IH  ++++     L ++++ ALI+MY+KCG+L  A+++F+ +  
Sbjct: 510 VLVSSGQIASYEVGSQIHCFIMKS--GLNLDISVSNALINMYTKCGSLECARKMFDSIGN 567

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
             ++SW+ +I GY +     E   LF  M    V P+EIT + ++  C  +G ++ G  L
Sbjct: 568 PDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKL 627

Query: 298 HAYILRNGFEFSLAM--ANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
           +   ++  +  S      + +VD+  +   +  A      M    DV++W  +++A
Sbjct: 628 YR-TMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAA 682


>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 218/630 (34%), Positives = 331/630 (52%), Gaps = 71/630 (11%)

Query: 69  VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYL 128
           +D+     +L +C +       + IH   IK     + ++ N L+  Y +CG    AR +
Sbjct: 17  LDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKV 76

Query: 129 FDEMPNR-------------------------------DVVSWSTMIRGYHRGGLPEEAL 157
           FD MP R                               D  SW+ M+ G+ +    EEAL
Sbjct: 77  FDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEAL 136

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
               +M   D   +E +  S +S  A + D+++G  IHA + ++     L V + +AL+D
Sbjct: 137 RFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKS--RYLLDVYMGSALVD 194

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYSKCG +A A++ F+ +   ++VSW  +I+ Y +     + + +F  M++  V P EIT
Sbjct: 195 MYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEIT 254

Query: 278 ILSLIIECGFVGGLQLGKWLHAYIL-RNGFEFSLAMANALVDMYGKCREIRSARTLFD-- 334
           + S++  C     ++ G  +HA ++ R+ +   L + NALVDMY KCR +  AR +FD  
Sbjct: 255 LASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRM 314

Query: 335 -----------------------------GMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
                                         M  K+V+ WNA+I+ Y Q    ++A  LF+
Sbjct: 315 PLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFL 374

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL------EVDVILKTALVD 419
            +K   + P   T   LL+ C     L++G+  HT I K G       E D+ +  +L+D
Sbjct: 375 LLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLID 434

Query: 420 MYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGIT 479
           MY KCG V     +F   + RD+  WNAM+ GY  +G G  AL  F  M  SG KP+ +T
Sbjct: 435 MYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVT 494

Query: 480 FIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM 539
            IG+L+ACSHAGLV EG+  F  M   LGL P  +H+ CMVDLLGRAG LDEA+++I++M
Sbjct: 495 MIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTM 554

Query: 540 PLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVA 599
           P++P+ +VWG+LLAA K+H N  +G+  A +++EI+P N G  VL+SN+YA   RW DV 
Sbjct: 555 PMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVV 614

Query: 600 GVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            VR+ M++  V K+PG S +E+   VH F+
Sbjct: 615 RVRKQMRQRGVIKQPGCSWIEIQSRVHVFM 644



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 237/457 (51%), Gaps = 40/457 (8%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++V+ + ++++   AL  +  M      ++ ++  + L ACA +   ++G +IH    
Sbjct: 119 WNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALIS 178

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+    D Y+ +AL+ MYS+CG +  A+  FD M  R++VSW+++I  Y + G   +ALE
Sbjct: 179 KSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALE 238

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V   M    + P E+ + S+VS  A  + +  G  IHA VV+  K  +  + +  AL+DM
Sbjct: 239 VFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDK-YRNDLVLGNALVDM 297

Query: 219 YSKCGNLAYAKQLFNRLN-------------------------------QNSVVSWTVMI 247
           Y+KC  +  A+ +F+R+                                + +VVSW  +I
Sbjct: 298 YAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALI 357

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           +GY +  E  E VRLF  +  E+++P+  T  +L+  C  +  L+LG+  H  IL++GF 
Sbjct: 358 AGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFW 417

Query: 308 FS------LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
           F       + + N+L+DMY KC  +     +F+ M  +DV+ WNA+I  YAQ      A 
Sbjct: 418 FQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQNGYGTNAL 477

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDM 420
           E+F  M VS  +P+ VTM+G+LS C+ AG +E G ++ H+   + GL       T +VD+
Sbjct: 478 EIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDL 537

Query: 421 YAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
             + G ++ A  L     +  D  +W +++A   +HG
Sbjct: 538 LGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHG 574



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 199/457 (43%), Gaps = 81/457 (17%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +NSL+T Y +N     AL ++  M  NG E D  T+ +++ ACA       G +
Sbjct: 214 VRNIVSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQ 273

Query: 93  IHGFAIK-NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR---------------- 135
           IH   +K +    D  + NAL+ MY++C  +  AR +FD MP R                
Sbjct: 274 IHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAA 333

Query: 136 ---------------DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
                          +VVSW+ +I GY + G  EEA+ +   ++   I P+     ++++
Sbjct: 334 SVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLN 393

Query: 181 LFADVADVDLGKAIHACVVRN----CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLN 236
             A++AD+ LG+  H  ++++       E+  + +  +LIDMY KCG +     +F R+ 
Sbjct: 394 ACANLADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMV 453

Query: 237 QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
           +  VVSW  MI GY +       + +F +M+     P  +T++ ++  C   G ++ G+ 
Sbjct: 454 ERDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGR- 512

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
                                      R   S RT       KD   +  ++    +A C
Sbjct: 513 ---------------------------RYFHSMRTELGLAPMKD--HFTCMVDLLGRAGC 543

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
           +D+A +L   M    ++P+ V    LL+ C   G +E+GK    Y+ ++ +E+D +    
Sbjct: 544 LDEANDLIQTM---PMQPDNVVWGSLLAACKVHGNIELGK----YVAEKLMEIDPLNSGP 596

Query: 417 LV---DMYAKCGDVNGAYRLFSEAIYRDI-----CMW 445
            V   +MYA+ G      R+  +   R +     C W
Sbjct: 597 YVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSW 633


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/593 (34%), Positives = 333/593 (56%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L++ + +      AL I+  M+ +G   D  TI ++L ACA +     G ++H +  
Sbjct: 212 FNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLF 271

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+  D  +  +L+ +Y +CG + +A  +F+     +VV W+ M+  + +     ++ E
Sbjct: 272 KAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFE 331

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+   IRP++     ++       ++DLG+ IH+  V+   +  +   ++  LIDM
Sbjct: 332 LFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDM--YVSGVLIDM 389

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSK G L  A+++   L +  VVSWT MI+GY++     + +  F EM +  ++P  I +
Sbjct: 390 YSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGL 449

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S I  C  +  ++ G  +HA I  +G+   +++ NALV++Y +C  IR A + F+ M+ 
Sbjct: 450 ASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMEL 509

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD +  N ++S +AQ+   ++A ++F+ M  S V+ N  T V  LS       ++ GK +
Sbjct: 510 KDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQI 569

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + K G   +  +  AL+ +Y KCG    A   FSE   R+   WN ++     HG G
Sbjct: 570 HARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRG 629

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F  M++ G+KPN +TFIG+L ACSH GLV EG S F  M    G+ P+ +HY C
Sbjct: 630 LEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC 689

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           ++D+ GRAG LD A + I+ MP+  + +VW  LL+A K+HKN  +GE AA  +LE+EP +
Sbjct: 690 VIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHD 749

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VL+SN YAV  +W +   VR++M++  V+KEPG S +EV  +VH F  G
Sbjct: 750 SASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVG 802



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/522 (27%), Positives = 272/522 (52%), Gaps = 12/522 (2%)

Query: 41  SLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
           ++++ Y +N     AL +Y  M + G     + + ++L +C +  +   G+ IH    K+
Sbjct: 113 AMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKH 172

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G   + +V NA+I +Y  CGS   A  +F +MP+RD V+++T+I G+ + G  E ALE+ 
Sbjct: 173 GFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIF 232

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALI 216
            EM+F  + P  V + S+++  A + D+  G  +H+ +       K G++    +  +L+
Sbjct: 233 EEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLF------KAGISSDYIMEGSLL 286

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           D+Y KCG++  A  +FN  ++ +VV W +M+  + + N++ +   LF +M    + P++ 
Sbjct: 287 DLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQF 346

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T   ++  C     + LG+ +H+  ++ GFE  + ++  L+DMY K   +  AR + + +
Sbjct: 347 TYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEML 406

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           K KDV+ W ++I+ Y Q  C   A   F  M+   + P+ + +   +S C    A+  G 
Sbjct: 407 KEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGL 466

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H  I   G   DV +  ALV++YA+CG +  A+  F E   +D    N +++G+   G
Sbjct: 467 QIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSG 526

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             EEAL  F+ M++SGVK N  TF+  L+A ++   + +GK +  +++   G   + E  
Sbjct: 527 LHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIK-TGHSFETEVG 585

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             ++ L G+ G  ++A      M  R N + W  ++ +   H
Sbjct: 586 NALISLYGKCGSFEDAKMEFSEMSER-NEVSWNTIITSCSQH 626



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 147/523 (28%), Positives = 268/523 (51%), Gaps = 10/523 (1%)

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC-AQVLMTHLGKEIHGFAIKNG 101
           +  ++ +  P+  L+++A   +    +        L+AC        +  EIH  A+  G
Sbjct: 13  LAGFLAHEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRG 72

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
           L     V N LI +YS+ G ++ AR +F+E+  RD VSW  M+ GY + GL EEAL + R
Sbjct: 73  LGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYR 132

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALIDMY 219
           +M    + P+   + S++S          G+ IHA   ++  C +    + +  A+I +Y
Sbjct: 133 QMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSE----IFVGNAVITLY 188

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            +CG+   A+++F  +     V++  +ISG+ +C      + +F EM    + P  +TI 
Sbjct: 189 LRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTIS 248

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           SL+  C  +G LQ G  LH+Y+ + G      M  +L+D+Y KC ++ +A  +F+     
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT 308

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           +V++WN ++ A+ Q + + K+FELF  M+ + +RPN+ T   +L  CT    +++G+ +H
Sbjct: 309 NVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIH 368

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
           +   K G E D+ +   L+DMY+K G +  A R+      +D+  W +M+AGY  H C +
Sbjct: 369 SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCK 428

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           +AL  F +M++ G+ P+ I     ++ C+    + +G  +  + ++  G    +  +  +
Sbjct: 429 DALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHAR-IYVSGYSGDVSIWNAL 487

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL--LAASKLHKN 560
           V+L  R G + EA    + M L+  +   G +   A S LH+ 
Sbjct: 488 VNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEE 530



 Score = 43.9 bits (102), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 69/163 (42%), Gaps = 28/163 (17%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTNIINPL-------------------------TRYNSLV 43
            ++Q +Q HA +IKT   F  T + N L                           +N+++
Sbjct: 562 EIKQGKQIHARVIKTGHSFE-TEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTII 620

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG-KEIHGFAIKNGL 102
           TS  ++ +   AL+++  M+K G + ++ T   +L AC+ V +   G       + + G+
Sbjct: 621 TSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGI 680

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMI 144
                    +I ++   G L  A+   +EMP   D + W T++
Sbjct: 681 RPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLL 723


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/591 (35%), Positives = 337/591 (57%), Gaps = 3/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N +V  Y K+     AL++Y  M   G   D +T P +L++C  V    +G+E+H   +
Sbjct: 157 WNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPDWRMGREVHAHVL 216

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G   +  V NAL+ MY++CG +++AR +FD M   D +SW+ MI G+   G     LE
Sbjct: 217 RFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFENGECNAGLE 276

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M   +++P+ + + S+      ++DV   K +H   V+  +     VA   +LI M
Sbjct: 277 LFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVK--RGFAGDVAFCNSLIQM 334

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+  G +  A+ +F+R++    ++WT MISGY +    ++ + ++A M   NV P +ITI
Sbjct: 335 YASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVSPDDITI 394

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +  C  +G L +G  LH      GF   + + NA+++MY K + I  A  +F  M  
Sbjct: 395 ASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHE 454

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KDV+ W+++I+ +   H   +A   F HM ++ V+PN VT +  L+ C   GAL  GK +
Sbjct: 455 KDVVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKPNSVTFIAALAACAATGALRSGKEI 513

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ + G+E +  L  AL+D+Y KCG    A+  F     +D+  WN M+AG+  HG G
Sbjct: 514 HAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHG 573

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           + AL FF  M + G  P+ +TF+ LL ACS  G+V+EG  +F  M     +VP ++HY C
Sbjct: 574 DTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYAC 633

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLL RAG L EA+  I  MP+ P+  VWGALL   ++H++  +GE+AA  +L +EP +
Sbjct: 634 MVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVLALEPND 693

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            GY+VL+ ++YA A  W+ +A VR+ M+E  +  + G S VEV G+VH F+
Sbjct: 694 AGYHVLLCDLYADACLWDKLARVRKTMREKGLDHDSGCSWVEVKGVVHAFL 744



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 129/392 (32%), Positives = 218/392 (55%), Gaps = 3/392 (0%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           + NA++ M    G    A  +F +MP RDV SW+ M+ GY + GL +EAL++   M +  
Sbjct: 125 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAG 184

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
           +RP       ++     V D  +G+ +HA V+R    E+  V +  AL+ MY+KCG++  
Sbjct: 185 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEE--VDVLNALMTMYAKCGDVMA 242

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A+++F+ +     +SW  MI+G+    E N G+ LF  M+ + V P+ +TI S+ +  G 
Sbjct: 243 ARKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGL 302

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
           +  +   K +H   ++ GF   +A  N+L+ MY     +R ART+F  M ++D M W A+
Sbjct: 303 LSDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAM 362

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           IS Y +    DKA E++  M+V+ V P+++T+   L+ C   G+L++G  LH   E +G 
Sbjct: 363 ISGYEKNGFPDKALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGF 422

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
              +++  A+++MYAK   ++ A  +F     +D+  W++M+AG+  +    EAL +F  
Sbjct: 423 ISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRH 482

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           M  + VKPN +TFI  L AC+  G +  GK +
Sbjct: 483 M-LADVKPNSVTFIAALAACAATGALRSGKEI 513



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 195/384 (50%), Gaps = 4/384 (1%)

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           P E A +++  L      V+ G  + AC   + +    G+ +  A++ M  + G   +A 
Sbjct: 86  PDEDAYVALFRLCEWRRAVEPG--LRACAHADDRHAWFGLRLGNAMLSMLVRFGETWHAW 143

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           ++F ++ +  V SW VM+ GY +   ++E + L+  M+   V P   T   ++  CG V 
Sbjct: 144 RVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVP 203

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
             ++G+ +HA++LR GF   + + NAL+ MY KC ++ +AR +FD M   D + WNA+I+
Sbjct: 204 DWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIA 263

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
            + +    +   ELF+ M   +V+PN +T+  +         +   K +H    K+G   
Sbjct: 264 GHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAG 323

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           DV    +L+ MYA  G +  A  +FS    RD   W AM++GY  +G  ++AL  +  ME
Sbjct: 324 DVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALME 383

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
            + V P+ IT    L AC+  G +  G  + + +    G +  I     ++++  ++  +
Sbjct: 384 VNNVSPDDITIASALAACACLGSLDVGVKLHE-LAESKGFISYIVVTNAILEMYAKSKRI 442

Query: 530 DEAHEMIKSMPLRPNMIVWGALLA 553
           D+A E+ K M  + +++ W +++A
Sbjct: 443 DKAIEVFKCMHEK-DVVSWSSMIA 465


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/542 (35%), Positives = 322/542 (59%), Gaps = 3/542 (0%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           ++IH   I +GL  + ++SN+L+  Y  CG L  A+ +F   P ++VVSW+ +I G  + 
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKN 100

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
               EA++V REM   + +P+ V + S++  FA++  + + K++H   VR   +    V 
Sbjct: 101 DCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGN--VF 158

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           + TAL+DMYSK G +  A+QLF  +++ +VV+W  ++SGY       E + LF  M  + 
Sbjct: 159 VETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKG 218

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           +     TI+SLI     VG LQ+G  +H +I+R G+E    +  AL+D+Y     +  A 
Sbjct: 219 LLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAH 278

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEA 389
            +F  M  KDV  W  +++ ++     D+A + F  M  +  ++ + + ++G+LS C+ +
Sbjct: 279 RVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHS 338

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           GAL+ G+ +H    K     ++ + +A++DMYA CG++  A R F     +D+  WNAM+
Sbjct: 339 GALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMI 398

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           AG GM+G G +A+  F+ M+ SG+ P+  TF+ +L ACSHAG+V EG  +F  MV    +
Sbjct: 399 AGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHV 458

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
           +P ++HY C++D+LGRAG LD A+  I +MP +P+  V+  LL A ++H N  +G   + 
Sbjct: 459 IPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQ 518

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +I E+EP + GY VL+SN+YA+A  W  V   R  ++  R+KK+PGFSS+E+N  ++ F+
Sbjct: 519 KIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKDPGFSSIEINQEIYTFM 578

Query: 630 RG 631
            G
Sbjct: 579 AG 580



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 236/475 (49%), Gaps = 29/475 (6%)

Query: 9   NLEQTRQCHAHIIK---THFKFSYTNIINP---------------------LTRYNSLVT 44
           +L+  +Q HA II    TH  F   +++N                      +  +  L++
Sbjct: 36  DLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILIS 95

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
              KN+    A++++  M     + +  TI ++L A A + +  + K +H F ++ G +G
Sbjct: 96  GLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEG 155

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           + +V  AL+ MYS+ G +  AR LF+ M  R+VV+W+ ++ GY   G  EEA+++   MR
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMR 215

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
              +      ++S++     V  + +G  IH  ++R   +      I TAL+D+Y     
Sbjct: 216 RKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYEND--KHIKTALMDIYVSHNC 273

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE-ENVFPSEITILSLII 283
           +  A ++F+ ++   V +WT+M++G+      +  ++ F +M+  +N+    I ++ ++ 
Sbjct: 274 VDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILS 333

Query: 284 ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
            C   G LQ G+ +HA  ++  F  ++ + +A++DMY  C  +  A+  F GM  KDV+ 
Sbjct: 334 SCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVC 393

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           WNA+I+          A +LF+ MK S + P+E T V +L  C+ AG +  G  +  ++ 
Sbjct: 394 WNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMV 453

Query: 404 KQGLEVDVILKTA-LVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHG 456
           K    +  +   A ++D+  + G ++ AY   +   ++ D  +++ ++    +HG
Sbjct: 454 KTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHG 508


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 198/592 (33%), Positives = 342/592 (57%), Gaps = 5/592 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++++++       AL+++  M++ G   + +T    L+         LG  IHG  +
Sbjct: 216 WNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVL 275

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+    D YV+NALI MY++CG +  A  +F+ M  RD VSW+T++ G  +  L  +AL 
Sbjct: 276 KSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALN 335

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             R+M+    +P +V+++++++      ++  GK +HA  +RN  D  +   I   L+DM
Sbjct: 336 YFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNM--QIGNTLVDM 393

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-EGVRLFAEMIEENVFPSEIT 277
           Y+KC  + Y    F  +++  ++SWT +I+GY + NE + E + LF ++  + +    + 
Sbjct: 394 YAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQ-NEFHLEAINLFRKVQVKGMDVDPMM 452

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           I S++  C  +      + +H Y+ +      + + NA+V++YG+   I  AR  F+ ++
Sbjct: 453 IGSVLRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHIDYARRAFESIR 511

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           SKD++ W ++I+         +A ELF  +K + ++P+ + ++  LS      +L+ GK 
Sbjct: 512 SKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKE 571

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H ++ ++G  ++  + ++LVDMYA CG V  + ++F     RD+ +W +M+   GMHGC
Sbjct: 572 IHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGC 631

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G +A+  F  M    V P+ ITF+ LL ACSH+GL+ EGK  F+ M +G  L P  EHY 
Sbjct: 632 GNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYA 691

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLL R+  L+EA+  +++MP++P+  +W ALL A  +H N  +GE+AA ++L+ + +
Sbjct: 692 CMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTE 751

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           N G   L+SNI+A   RWNDV  VR  MK   +KK PG S +EV+  +H F+
Sbjct: 752 NSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFM 803



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 166/574 (28%), Positives = 296/574 (51%), Gaps = 31/574 (5%)

Query: 10  LEQTRQCHAHIIKTHFK-FSYTNII---------------------NPLTRYNSLVTSYI 47
           L Q +Q HA ++K+H   F  T ++                       +  +N+L+ +++
Sbjct: 62  LPQGQQLHALLLKSHLSAFLATKLVLMYGKCGSLRDAVKVFDEMSERTIFSWNALMGAFV 121

Query: 48  KNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAY 107
            + K   A+ +Y  MR  G  +D  T P++LKAC  +  + LG EIHG A+K G     +
Sbjct: 122 SSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVF 181

Query: 108 VSNALIQMYSECGSLVSARYLFDE--MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
           V NALI MY +CG L  AR LFD   M   D VSW+++I  +   G   EAL + R M+ 
Sbjct: 182 VCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQE 241

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
           + +  +    ++ +    D + V LG  IH  V+++  +    V +A ALI MY+KCG +
Sbjct: 242 VGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKS--NHFADVYVANALIAMYAKCGRM 299

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
             A ++F  +     VSW  ++SG ++    ++ +  F +M      P ++++L+LI   
Sbjct: 300 EDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAAS 359

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
           G  G L  GK +HAY +RNG + ++ + N LVDMY KC  ++     F+ M  KD++ W 
Sbjct: 360 GRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWT 419

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
            +I+ YAQ     +A  LF  ++V  +  + + +  +L  C+   +    + +H Y+ K+
Sbjct: 420 TIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKR 479

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
            L  D++L+ A+V++Y + G ++ A R F     +DI  W +M+     +G   EAL  F
Sbjct: 480 DL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELF 538

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLG 524
             ++++ ++P+ I  I  L+A ++   + +GK +   ++  G  L   I     +VD+  
Sbjct: 539 YSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA--SSLVDMYA 596

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             G ++ + +M  S+  R ++I+W +++ A+ +H
Sbjct: 597 CCGTVENSRKMFHSVKQR-DLILWTSMINANGMH 629



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 80/144 (55%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + S++T  + N  P  AL ++  +++   + D+  I + L A A +     GKEIHG
Sbjct: 515 IVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHG 574

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F I+ G   +  ++++L+ MY+ CG++ ++R +F  +  RD++ W++MI      G   +
Sbjct: 575 FLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNK 634

Query: 156 ALEVMREMRFMDIRPSEVAMISMV 179
           A+ + ++M   ++ P  +  ++++
Sbjct: 635 AIALFKKMTDQNVIPDHITFLALL 658



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 12/178 (6%)

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           LL LC  A AL  G+ LH  + K  L     L T LV MY KCG +  A ++F E   R 
Sbjct: 52  LLDLCVAAKALPQGQQLHALLLKSHL--SAFLATKLVLMYGKCGSLRDAVKVFDEMSERT 109

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           I  WNA+M  +   G   EA+  + DM   GV  +  TF  +L AC        G+S   
Sbjct: 110 IFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACG-----ALGESRLG 164

Query: 502 KMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIKSMPL-RPNMIVWGALLAA 554
             +HG+ +      +      ++ + G+ G L  A  +   + + + + + W ++++A
Sbjct: 165 AEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISA 222


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 219/656 (33%), Positives = 356/656 (54%), Gaps = 70/656 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN-FTIPTILKACAQVLMTHLGKEIHGFA 97
           +N+L++ Y ++ +  ++L  +  M ++G    N FT    +K+C  +    L  ++ G  
Sbjct: 105 WNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMV 164

Query: 98  IKNGLDGDAYVSNALIQMYSECGSL-VSARY----------------------------- 127
            K G   D+ V+ AL+ M+  CG++ +++R                              
Sbjct: 165 QKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHAL 224

Query: 128 -LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            LFD MP RDVVSW+ M+    + G   EAL+++ +M+   +R       S ++  A ++
Sbjct: 225 ELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLS 284

Query: 187 DVDLGKAIHACVVRN--CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
            +  GK +HA V+RN  C D      +A+AL+++Y+KCG    AK +FN L+  + V+WT
Sbjct: 285 SLRWGKQLHAQVIRNLPCIDPY----VASALVELYAKCGCFKEAKGVFNSLHDRNNVAWT 340

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
           V+I+G+++     E V LF +M  E +   +  + +LI  C     L LG+ LH+  L++
Sbjct: 341 VLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKS 400

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
           G   ++ ++N+L+ MY KC  ++SA ++F  M  KD++ W ++I+A++Q   I KA E F
Sbjct: 401 GQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFF 460

Query: 365 IHMKVS--------------------------------KVRPNEVTMVGLLSLCTEAGAL 392
             M                                    VRP+ VT V L   C + GA 
Sbjct: 461 DGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGAN 520

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           ++G  +     K GL +D  +  A++ MY+KCG +  A ++F     +DI  WNAM+ GY
Sbjct: 521 KLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGY 580

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             HG G++A+  F D+ + G KP+ I+++ +L+ CSH+GLV EGKS FD M     + P 
Sbjct: 581 SQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPG 640

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           +EH+ CMVDLLGRAG L EA ++I  MP++P   VWGALL+A K+H N  + E+AA  + 
Sbjct: 641 LEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVF 700

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           E++  + G  +LM+ IYA A + +D A +R++M++  +KK PG+S +EVN  VH F
Sbjct: 701 ELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVF 756



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/578 (22%), Positives = 237/578 (41%), Gaps = 102/578 (17%)

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYL--------- 128
           L++C         + +HG  +  GL    ++ N L+  Y  CG+L  AR L         
Sbjct: 11  LRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPN 70

Query: 129 -----------------------FDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-R 164
                                  F  MP RDV SW+T++ GY +      +LE    M R
Sbjct: 71  VITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHR 130

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALIDMYSKCG 223
             D  P+       +     + +  L   +   V +   +D+     +A AL+DM+ +CG
Sbjct: 131 SGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDS---DVAAALVDMFVRCG 187

Query: 224 NLAYAKQLFNRLNQNS-------------------------------VVSWTVMISGYIR 252
            +  A +LF R+ + +                               VVSW +M+S   +
Sbjct: 188 TVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQ 247

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
              + E + +  +M  + V     T  S +  C  +  L+ GK LHA ++RN       +
Sbjct: 248 SGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYV 307

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
           A+ALV++Y KC   + A+ +F+ +  ++ + W  +I+ + Q  C  ++ ELF  M+   +
Sbjct: 308 ASALVELYAKCGCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELM 367

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC-------- 424
             ++  +  L+S C     L +G+ LH+   K G    V++  +L+ MYAKC        
Sbjct: 368 TLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAES 427

Query: 425 -----------------------GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
                                  G++  A   F     +++  WNAM+  Y  HG  E+ 
Sbjct: 428 IFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDG 487

Query: 462 L-IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           L ++ V +    V+P+ +T++ L   C+  G    G  +  + V  +GL+        ++
Sbjct: 488 LRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVK-VGLILDTSVANAVI 546

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            +  + G + EA ++   + ++ +++ W A++     H
Sbjct: 547 TMYSKCGRILEARKVFDFLNVK-DIVSWNAMITGYSQH 583



 Score = 42.0 bits (97), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 6/173 (3%)

Query: 20  IIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILK 79
           I++    F + N+   +  +N+++T Y ++     A+ I+  + K G++ D  +   +L 
Sbjct: 555 ILEARKVFDFLNV-KDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 613

Query: 80  ACAQVLMTHLGKEIHGF--AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
            C+   +   GK        + N   G  + S  ++ +    G L  A+ L DEMP +  
Sbjct: 614 GCSHSGLVQEGKSYFDMMKRVHNISPGLEHFS-CMVDLLGRAGHLTEAKDLIDEMPMKPT 672

Query: 138 VS-WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
              W  ++      G  E A    + +  +D  P   + + M  ++AD    D
Sbjct: 673 AEVWGALLSACKIHGNNELAELAAKHVFELD-SPDSGSYMLMAKIYADAGKSD 724


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 194/532 (36%), Positives = 310/532 (58%), Gaps = 33/532 (6%)

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
           + PN+ +  W+TM+RGY     P  AL++   M  + + P+      ++   A     + 
Sbjct: 27  QEPNQLI--WNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEE 84

Query: 191 GKAIHACVVRNCKDEKLGVAIA-----------------------------TALIDMYSK 221
           G+ IH  V++   +  L V  +                             TALI  Y+ 
Sbjct: 85  GQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYAS 144

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
            GN+  A+++F+ +    VVSW  MISGY       E + LF EM++ NV P E T++++
Sbjct: 145 SGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTV 204

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +  C     ++LG+ +H++I  +GF  +L + NAL+D+Y KC ++ +A  LF+G+  KDV
Sbjct: 205 LSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDV 264

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           + WN +I  Y   +   +A  LF  M  S   PN+VT+V +L  C   GA+++G+W+H Y
Sbjct: 265 VSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVY 324

Query: 402 IEKQGLEVD--VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
           I+K+  +V     L+T+L+DMYAKCGD+  A+++F+  +++ +  WNAM+ G+ MHG   
Sbjct: 325 IDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRAN 384

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
                F  M ++G++P+ ITF+GLL+ACSH+G +  G+ +F  M     + PK+EHYGCM
Sbjct: 385 AGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCM 444

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNY 579
           +DLLG +GL  EA EMIK+MP+ P+ ++W +LL A + H N  + E  A  ++++EP+N 
Sbjct: 445 IDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMKVEPENP 504

Query: 580 GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           G  VL+SNIYA A  W++VA VR ++    +KK PG SS+E++  VH+FI G
Sbjct: 505 GSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIVG 556



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 172/558 (30%), Positives = 285/558 (51%), Gaps = 70/558 (12%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y  ++ P SAL +Y  M   G   +++T P +LK+CA+      G++IHG  +
Sbjct: 34  WNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVL 93

Query: 99  KNGLDGDAYVSNALIQMYSE-------------------------------CGSLVSARY 127
           K G + D YV  +LI MY++                                G++ SA+ 
Sbjct: 94  KLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQE 153

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           +FDE+P +DVVSW+ MI GY   G  +EALE+ +EM   ++RP E  M++++S  A    
Sbjct: 154 MFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRS 213

Query: 188 VDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           V+LG+ +H+ +     D   G  + I  ALID+YSKCG +  A  LF  L+   VVSW  
Sbjct: 214 VELGRQVHSWI----DDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNT 269

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
           +I GY   N   E + LF EM+     P+++TI+S++  C  +G + +G+W+H YI +  
Sbjct: 270 LIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKL 329

Query: 306 FEFSLA--MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
            + + A  +  +L+DMY KC +I +A  +F+ M  K +  WNA+I  +A     +  F+L
Sbjct: 330 KDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDL 389

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F  M+ + + P+++T VGLLS C+ +G L++G+ +   + +   + D+   T  ++ Y  
Sbjct: 390 FSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQ---DYDI---TPKLEHYGC 443

Query: 424 CGDVNGAYRLFSEA--------IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
             D+ G   LF EA        +  D  +W +++     HG  E A  F  ++ +  V+P
Sbjct: 444 MIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARNLMK--VEP 501

Query: 476 -NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL--VPKIEHYGCMVDLLGRAGLLDEA 532
            N  +++ L N  + AG   E   V   +++G G+  VP     GC         +  E 
Sbjct: 502 ENPGSYVLLSNIYATAGEWDEVAKV-RALLNGKGMKKVP-----GC-----SSIEIDSEV 550

Query: 533 HEMIKSMPLRP-NMIVWG 549
           HE I    L P N  ++G
Sbjct: 551 HEFIVGDKLHPRNREIYG 568



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 200/398 (50%), Gaps = 39/398 (9%)

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
             YA  +F  + + + + W  M+ GY   ++    ++L+  MI   + P+  T   L+  
Sbjct: 16  FPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKS 75

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK---------------------- 322
           C      + G+ +H ++L+ G+E  L +  +L+ MY +                      
Sbjct: 76  CAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSY 135

Query: 323 ---------CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
                       IRSA+ +FD +  KDV+ WNA+IS YA+     +A ELF  M  + VR
Sbjct: 136 TALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVR 195

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           P+E TMV +LS C ++ ++E+G+ +H++I+  G   ++ +  AL+D+Y+KCG V  A  L
Sbjct: 196 PDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGL 255

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F     +D+  WN ++ GY      +EAL+ F +M RSG  PN +T + +L AC+H G +
Sbjct: 256 FEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAI 315

Query: 494 TEGKSV---FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
             G+ +    DK +  +   P +     ++D+  + G ++ AH++  SM L  ++  W A
Sbjct: 316 DIGRWIHVYIDKKLKDVTNAPSLR--TSLIDMYAKCGDIEAAHQVFNSM-LHKSLSSWNA 372

Query: 551 LLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMS 586
           ++    +H   + G    +++ +  IEP +  +  L+S
Sbjct: 373 MIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLS 410



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 170/320 (53%), Gaps = 2/320 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +N++++ Y +      AL ++  M K     D  T+ T+L ACAQ     LG++
Sbjct: 160 VKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQ 219

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H +   +G   +  + NALI +YS+CG + +A  LF+ +  +DVVSW+T+I GY    L
Sbjct: 220 VHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNL 279

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            +EAL + +EM      P++V ++S++   A +  +D+G+ IH  + +  KD     ++ 
Sbjct: 280 YKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLR 339

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T+LIDMY+KCG++  A Q+FN +   S+ SW  MI G+      N G  LF+ M +  + 
Sbjct: 340 TSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIE 399

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSART 331
           P +IT + L+  C   G L LG+ +   + ++      L     ++D+ G     + A+ 
Sbjct: 400 PDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKE 459

Query: 332 LFDGMK-SKDVMIWNAVISA 350
           +   M    D +IW +++ A
Sbjct: 460 MIKTMPMEPDGVIWCSLLKA 479


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 213/585 (36%), Positives = 322/585 (55%), Gaps = 43/585 (7%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           K+IH   IK GL    +  + LI+    S  G +  A  LF+ +   ++  W++MIRG  
Sbjct: 46  KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEPNLFIWNSMIRGLS 105

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
               P  AL     M +  + P+      ++   A +A    GK IHA V+      KLG
Sbjct: 106 MSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVL------KLG 159

Query: 209 ----VAIATALIDMYSKCGNL-------------------------------AYAKQLFN 233
               V I T+LI+MY++ G +                                 A+QLF+
Sbjct: 160 FVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFD 219

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL 293
            +    VVSW  MI+GY +     E + LF +M + NV P+E TI+S++  C     L L
Sbjct: 220 EMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDL 279

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           G  + ++I   G   +L + NAL+DMY KC ++++AR LFD M  +DV+ WN +I  Y  
Sbjct: 280 GNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNVMIGGYTH 339

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
                +A  LF  M  S V P E+T + +L  C   GA+++GKW+H YI K    V   L
Sbjct: 340 MCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSL 399

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
            T+L+D+YAKCG++  A ++F     + +  WNAM+ G  MHG  ++A   F  M   G+
Sbjct: 400 STSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGI 459

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
           +PN ITF+G+L+AC HAGLV  G+  F  MV    + PK +HYGCM+DLLGRAGL +EA 
Sbjct: 460 EPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAE 519

Query: 534 EMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVAN 593
            ++++M ++P+  +WG+LL A + H    +GE+ A ++ E+EP N G  VL+SNIYA A 
Sbjct: 520 SLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLSNIYAGAG 579

Query: 594 RWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           +W+DVA +R  + +  +KK PG +++EV+ +VH+F+ G  V+ +S
Sbjct: 580 KWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQS 624



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 181/562 (32%), Positives = 282/562 (50%), Gaps = 96/562 (17%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHF-----------KFS--------------YTNIINP 35
           +K+ +   ++   +Q HAHIIKT             +FS              + +I  P
Sbjct: 33  LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92

Query: 36  -LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
            L  +NS++     +  P+ AL  +  M  +G E +++T P +LK+CA++   H GK+IH
Sbjct: 93  NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVS------------------------------ 124
              +K G   D ++  +LI MY++ G + +                              
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMD 212

Query: 125 -ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFA 183
            AR LFDEMP +DVVSW+ MI GY + G  +EAL +  +MR  ++ P+E  ++S++S  A
Sbjct: 213 RARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACA 272

Query: 184 DVADVDLGKAIHACVVRN--CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
               +DLG ++ + +     C + KL      ALIDMYSKCG+L  A++LF+ + +  V+
Sbjct: 273 QSNALDLGNSMRSWIEDRGLCSNLKL----VNALIDMYSKCGDLQTARELFDDMLERDVI 328

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           SW VMI GY       E + LF EM+   V P+EIT LS++  C  +G + LGKW+HAYI
Sbjct: 329 SWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYI 388

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
            +N    S +++ +L+D+Y KC  I +AR +FDGMK K +  WNA+I   A     DKAF
Sbjct: 389 NKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAF 448

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
           ELF  M    + PNE+T VG+LS C  AG +++G+   + + +                 
Sbjct: 449 ELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQD---------------- 492

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
                    Y++  ++ +     +  M+   G  G  EEA     +ME   VKP+G  + 
Sbjct: 493 ---------YKISPKSQH-----YGCMIDLLGRAGLFEEAESLLQNME---VKPDGAIWG 535

Query: 482 GLLNACSHAGLVTEGKSVFDKM 503
            LL AC   G V  G+ V +++
Sbjct: 536 SLLGACRDHGRVELGELVAERL 557


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 209/595 (35%), Positives = 336/595 (56%), Gaps = 11/595 (1%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           N+++  +++N +      ++  M     E++++T    LKAC  +L   +G EI   A++
Sbjct: 114 NAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVR 173

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
            G     YV ++++    + G L  A+ +FD MP +DVV W+++I GY + GL  E++++
Sbjct: 174 RGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQM 233

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATAL 215
             EM    +RPS V M +++          +G   H+ V+       LG    V + T+L
Sbjct: 234 FLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVL------ALGMGNDVFVLTSL 287

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMYS  G+   A  +F+ +   S++SW  MISGY++   I E   LF  +++       
Sbjct: 288 VDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDS 347

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T++SLI  C     L+ G+ LH+ I+R   E  L ++ A+VDMY KC  I+ A  +F  
Sbjct: 348 GTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGR 407

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M  K+V+ W A++   +Q    + A +LF  M+  KV  N VT+V L+  C   G+L  G
Sbjct: 408 MGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKG 467

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY-RDICMWNAMMAGYGM 454
           + +H +  + G   D ++ +AL+DMYAKCG ++ A +LF+   + +D+ + N+M+ GYGM
Sbjct: 468 RTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGM 527

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           HG G  AL  +  M    +KPN  TF+ LL ACSH+GLV EGK++F  M     + P+ +
Sbjct: 528 HGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHK 587

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HY C+VDL  RAG L+EA E++K MP +P+  V  ALL+  + HKN +MG   A +++ +
Sbjct: 588 HYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISL 647

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +  N G  V++SNIYA A +W  V  +R +M+   +KK PG+S +EV   V+ F 
Sbjct: 648 DYLNSGIYVMLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFF 702



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 245/469 (52%), Gaps = 5/469 (1%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           K IH   IKN +  +++++  LI++YS+ G L  AR +FD+    +    + MI G+ R 
Sbjct: 64  KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
               E   + R M   DI  +    +  +    D+ D ++G  I    VR  +   L + 
Sbjct: 124 QQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVR--RGFHLHLY 181

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           + +++++   K G LA A+++F+ + +  VV W  +I GY++     E +++F EMI   
Sbjct: 182 VGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGGG 241

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + PS +T+ +L+  CG  G  ++G   H+Y+L  G    + +  +LVDMY    +  SA 
Sbjct: 242 LRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAA 301

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +FD M S+ ++ WNA+IS Y Q   I +++ LF  +  S    +  T+V L+  C++  
Sbjct: 302 LVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTS 361

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
            LE G+ LH+ I ++ LE  ++L TA+VDMY+KCG +  A  +F     +++  W AM+ 
Sbjct: 362 DLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLV 421

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGL 509
           G   +G  E+AL  F  M+   V  N +T + L++ C+H G +T+G++V    + HG   
Sbjct: 422 GLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAF 481

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
              I     ++D+  + G +  A ++  +     ++I+  +++    +H
Sbjct: 482 DAVIT--SALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMH 528



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 224/407 (55%), Gaps = 10/407 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++  Y++      ++ ++  M   G      T+  +LKAC Q  +  +G   H + +
Sbjct: 214 WNSIIGGYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVL 273

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G+  D +V  +L+ MYS  G   SA  +FD M +R ++SW+ MI GY + G+  E+  
Sbjct: 274 ALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYA 333

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R +           ++S++   +  +D++ G+ +H+C++R  K+ +  + ++TA++DM
Sbjct: 334 LFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIR--KELESHLVLSTAIVDM 391

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSKCG +  A  +F R+ + +V++WT M+ G  +     + ++LF +M EE V  + +T+
Sbjct: 392 YSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTL 451

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG-MK 337
           +SL+  C  +G L  G+ +HA+ +R+G+ F   + +AL+DMY KC +I SA  LF+    
Sbjct: 452 VSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFH 511

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KDV++ N++I  Y        A  ++  M   +++PN+ T V LL+ C+ +G +E GK 
Sbjct: 512 LKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKA 571

Query: 398 LHTYIEKQGLEVDVILK----TALVDMYAKCGDVNGAYRLFSEAIYR 440
           L   +E+   + DV  +      LVD++++ G +  A  L  +  ++
Sbjct: 572 LFHSMER---DHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQ 615



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 162/312 (51%), Gaps = 7/312 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N++++ Y++N     +  ++  + ++GS  D+ T+ ++++ C+Q      G+ +H 
Sbjct: 312 LISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHS 371

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             I+  L+    +S A++ MYS+CG++  A  +F  M  ++V++W+ M+ G  + G  E+
Sbjct: 372 CIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAED 431

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL++  +M+   +  + V ++S+V   A +  +  G+ +HA  +R+         I +AL
Sbjct: 432 ALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRH--GYAFDAVITSAL 489

Query: 216 IDMYSKCGNLAYAKQLF-NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           IDMY+KCG +  A++LF N  +   V+    MI GY         + +++ MIEE + P+
Sbjct: 490 IDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPN 549

Query: 275 EITILSLIIECGFVGGLQLGKWL-HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           + T +SL+  C   G ++ GK L H+    +           LVD++ +   +  A  L 
Sbjct: 550 QTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELV 609

Query: 334 DGM---KSKDVM 342
             M    S DV+
Sbjct: 610 KQMPFQPSTDVL 621


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 195/542 (35%), Positives = 321/542 (59%), Gaps = 3/542 (0%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           ++IH   I +GL  + ++SN+L+  Y  CG L  A+ +F   P ++VVSW+ +I G  + 
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILISGLAKN 100

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
               EA++V REM   + +P+ V + S++  FA++  + + K++H   VR   +    V 
Sbjct: 101 DCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGN--VF 158

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           + TAL+DMYSK G +  A+QLF  +++ +VVSW  ++SGY       E + LF  M  + 
Sbjct: 159 VETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKG 218

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           +     TI+SLI     VG LQ+G  +H +I+R G+E    +  AL+D+Y     +  A 
Sbjct: 219 LLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAH 278

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEA 389
            +F  M  KDV  W  +++ ++     D+A + F  M  +  ++ + + ++G+LS C+ +
Sbjct: 279 RVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHS 338

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           GAL+ G+ +H    K     ++ + +A++DMYA CG++  A R F     +D+  WNAM+
Sbjct: 339 GALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMI 398

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           AG GM+G G +A+  F+ M+ SG+ P+  TF+ +L ACSHAG+V EG  +F  MV     
Sbjct: 399 AGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHD 458

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
           +P ++HY C++D+LGRAG LD A+  I +MP +P+  V+  LL A ++H N  +G   + 
Sbjct: 459 IPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQ 518

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +I E+EP + GY VL+SN+YA+A  W  V   R  ++  R+KK+PGFSS+E+N  ++ F+
Sbjct: 519 KIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKDPGFSSIEINQEIYTFM 578

Query: 630 RG 631
            G
Sbjct: 579 AG 580



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 236/475 (49%), Gaps = 29/475 (6%)

Query: 9   NLEQTRQCHAHIIK---THFKFSYTNIINP---------------------LTRYNSLVT 44
           +L+  +Q HA II    TH  F   +++N                      +  +  L++
Sbjct: 36  DLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCKNVVSWTILIS 95

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
              KN+    A++++  M     + +  TI ++L A A + +  + K +H F ++ G +G
Sbjct: 96  GLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEG 155

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           + +V  AL+ MYS+ G +  AR LF+ M  R+VVSW+ ++ GY   G  EEA+++   MR
Sbjct: 156 NVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMR 215

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
              +      ++S++     V  + +G  IH  ++R   +      I TAL+D+Y     
Sbjct: 216 RKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYEND--KHIKTALMDIYVSHNC 273

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE-ENVFPSEITILSLII 283
           +  A ++F+ +    V +WT+M++G+      +  ++ F +M+  +N+    I ++ ++ 
Sbjct: 274 VDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILS 333

Query: 284 ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
            C   G LQ G+ +HA  ++  F  ++ + +A++DMY  C  +  A+  F GM  KDV+ 
Sbjct: 334 SCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVC 393

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           WNA+I+          A +LF+ MK S + P+E T V +L  C+ AG +  G  +  ++ 
Sbjct: 394 WNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMV 453

Query: 404 KQGLEVDVILKTA-LVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHG 456
           K   ++  +   A ++D+  + G ++ AY   +   ++ D  +++ ++    +HG
Sbjct: 454 KTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHG 508


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 230/683 (33%), Positives = 364/683 (53%), Gaps = 77/683 (11%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTNIINPL----TRYNSLVTSY-------IKNN------- 50
           NL Q RQ HA     H       + N L    + Y +L  +Y       ++++       
Sbjct: 93  NLTQVRQVHAQA-SVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 151

Query: 51  ----KPSSALNIYAFMR---KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD 103
               K    +N +   R   + G+  DN+T+P +++AC                +KN   
Sbjct: 152 GGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRD--------------LKN--- 194

Query: 104 GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
               +  AL+ MY +C  +  AR+LFD+M  RD+V+W+ MI GY   G   E+L +  +M
Sbjct: 195 ----LQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKM 250

Query: 164 RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCG 223
           R   + P +VAM+++V   A +  +   + I   + R  K  +L V + TA+IDMY+KCG
Sbjct: 251 REEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQR--KKFQLDVILGTAMIDMYAKCG 308

Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLII 283
            +  A+++F+R+ + +V+SW+ MI+ Y    +  + + LF  M+   + P +IT+ SL+ 
Sbjct: 309 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 368

Query: 284 ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
            C     L   + +HA    +G   +L +AN LV  Y   R +  A  LFDGM  +D + 
Sbjct: 369 ACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVS 428

Query: 344 WNAVISAYAQA----HCI------------------------DKAFELFIHMKVSKVRPN 375
           W+ ++  +A+     +C                         +++  LF  M+   V P+
Sbjct: 429 WSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPD 488

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
           +V MV ++  C + GA+   + +  YI+++  ++DVIL TA++DM+AKCG V  A  +F 
Sbjct: 489 KVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFD 548

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
               +++  W+AM+A YG HG G +AL  F  M RSG+ PN IT + LL ACSHAGLV E
Sbjct: 549 RMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEE 608

Query: 496 GKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAAS 555
           G   F  M     +   ++HY C+VDLLGRAG LDEA ++I+SM +  +  +WGA L A 
Sbjct: 609 GLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGAC 668

Query: 556 KLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPG 615
           + HK+  + E AAT +LE++PQN G+ +L+SNIYA A RW DVA  R +M + R+KK PG
Sbjct: 669 RTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPG 728

Query: 616 FSSVEVNGLVHKFIRGGMVNWKS 638
           ++ +EV+   H+F  G   + +S
Sbjct: 729 WTWIEVDNKSHQFSVGDTTHPRS 751


>gi|357494773|ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 213/593 (35%), Positives = 345/593 (58%), Gaps = 13/593 (2%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTI---LKACAQVLMTHL 89
           +  +  + +LV  Y++N +    L   + M + G +       T+     AC  +     
Sbjct: 173 VRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVS 232

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G+ +HG  +KNG+     + ++++ MY +CG    A   F E+ N+D++SW++MIR Y R
Sbjct: 233 GRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYAR 292

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKL 207
            G+  + +    EM    + P  + +  ++S F +  DV  GKA H  ++R     DE  
Sbjct: 293 FGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDE-- 350

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
              +  +L+ MY K G L++A++LF R +Q S+  W  MI GY R  +  + ++LF EM 
Sbjct: 351 --MVDNSLLSMYCKFGMLSFAERLFQR-SQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQ 407

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
              +    + I+S I  CG +G + LG+ +H  +++   + ++++ N+L++MYGKC ++ 
Sbjct: 408 YLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMN 467

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            +  +F+    +DV++WNA+ISA+      ++A  LF  M +    PN  T+V +LS C+
Sbjct: 468 VSWRIFN-RSERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACS 526

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
               LE G+ LH YI ++G ++++ L TALVDMYAKCG +  +  +F   + +D+  WNA
Sbjct: 527 HLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNA 586

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           M++GYGM+G  E A+  F  ME S VKPN ITF+ LL+AC+HAGLV EGK+VF KM    
Sbjct: 587 MISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKM-QSY 645

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
            + P ++HY CMVDLLGR+  L+EA E++ SMP+ P+  VWGALL+A K H    MG   
Sbjct: 646 SVKPNLKHYTCMVDLLGRSCNLEEAEELVLSMPIPPDGGVWGALLSACKTHNQIEMGIRI 705

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKE-IRVKKEPGFSSV 619
               ++ EP+N GY ++++N+Y+   RW++   VRR MK+   + K+ G+S V
Sbjct: 706 GKNAIDSEPENDGYYIMVANMYSSIGRWDEAENVRRTMKDRCSMGKKAGWSMV 758



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 141/522 (27%), Positives = 261/522 (50%), Gaps = 14/522 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS + +    +     L+ Y+ MR      ++FT P +  + A  +M   G  +H  A 
Sbjct: 77  WNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALAC 136

Query: 99  KNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           K G    ++ V ++ + +YS C  +  A  +FDE+P RDVV+W+ ++ GY + G  E  L
Sbjct: 137 KVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGL 196

Query: 158 EVMREM-RFMD--IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--VAIA 212
           E + EM R  D   +P+   +        ++ D+  G+ +H  VV+N     +G  + I 
Sbjct: 197 ECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKN----GIGCLLDIQ 252

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           ++++ MY KCG    A Q F+ +    ++SWT MI  Y R   +++ VR F EM+E  V 
Sbjct: 253 SSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVC 312

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P  + I  ++   G    +  GK  H  I+R  +     + N+L+ MY K   +  A  L
Sbjct: 313 PDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERL 372

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F   +   +  WN +I  Y +     K  +LF  M+   +R   V +V  ++ C + G +
Sbjct: 373 FQRSQGS-IEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEI 431

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
            +G+ +H  + K  ++  + +  +L++MY KC  +N ++R+F+ +  RD+ +WNA+++ +
Sbjct: 432 NLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFNRS-ERDVILWNALISAH 490

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
                 EEA+  F  M      PN  T + +L+ACSH   + +G+ +  + ++  G    
Sbjct: 491 IHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERL-HRYINEKGFKLN 549

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +     +VD+  + G L+++ E+  SM +  ++I W A+++ 
Sbjct: 550 LPLGTALVDMYAKCGQLEKSREVFDSM-MEKDVICWNAMISG 590



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 135/301 (44%), Gaps = 9/301 (2%)

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           IA  LI +Y    +   +  LF+ L       W   +      +   + +  ++ M  EN
Sbjct: 45  IAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSLYPQFLSFYSLMRSEN 104

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSA 329
           V P+  T   +         ++ G  LHA   + G F  + A+ ++ V +Y +C E+  A
Sbjct: 105 VLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDA 164

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV---SKVRPNEVTMVGLLSLC 386
             +FD +  +DV+ W A++  Y Q    +   E    M        +PN  T+ G    C
Sbjct: 165 VKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLAC 224

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
              G L  G+ LH  + K G+   + ++++++ MY KCG    AY+ FSE I +D+  W 
Sbjct: 225 GNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWT 284

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           +M+  Y   G   + + FF +M  + V P+G+    +L+   ++  V  GK+      HG
Sbjct: 285 SMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSGFGNSVDVYGGKA-----FHG 339

Query: 507 L 507
           L
Sbjct: 340 L 340



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 20/267 (7%)

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
            HA  +  G   +  +A  L+ +Y       S+ TLF  +  KD  +WN+ +        
Sbjct: 30  FHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSL 89

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG-LEVDVILKT 415
             +    +  M+   V PN  T   + S       +  G  LH    K G    +  + +
Sbjct: 90  YPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGS 149

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG--- 472
           + V +Y++C ++N A ++F E   RD+  W A++ GY  +G  E  L    +M R G   
Sbjct: 150 SFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDS 209

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLG-------R 525
            KPN  T  G   AC + G +  G+      +HGL +   I   GC++D+         +
Sbjct: 210 QKPNARTLEGGFLACGNLGDLVSGRC-----LHGLVVKNGI---GCLLDIQSSVLSMYCK 261

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALL 552
            G+  EA++    + +  +++ W +++
Sbjct: 262 CGVPREAYQSFSEV-INKDLLSWTSMI 287



 Score = 45.8 bits (107), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 37/184 (20%), Positives = 74/184 (40%), Gaps = 3/184 (1%)

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           L+SL      L+     H      G   +  +   L+ +Y        +  LF    ++D
Sbjct: 14  LISLSKRITTLQSLLPFHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKD 73

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
             +WN+ +          + L F+  M    V PN  TF  + ++ +H  ++  G ++  
Sbjct: 74  TFLWNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNL-H 132

Query: 502 KMVHGLGLVPKIEHYG-CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
            +   +G  P+    G   V L  R   +++A ++   +P+R +++ W AL+     +  
Sbjct: 133 ALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVR-DVVAWTALVIGYVQNGE 191

Query: 561 PSMG 564
             MG
Sbjct: 192 SEMG 195


>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
          Length = 749

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 210/638 (32%), Positives = 350/638 (54%), Gaps = 20/638 (3%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTNII---------------NPLTRYNSLVTSYIKNNKPS 53
           +L Q R+ H H++ +        +                NP++ + S++ ++++N +  
Sbjct: 59  SLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRNPVS-WASVIAAHVQNGRAG 117

Query: 54  SALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALI 113
            AL +++ M ++G+  D F + + ++AC ++     G+++H  A+K+    D  V NAL+
Sbjct: 118 DALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALV 177

Query: 114 QMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM-DIRPSE 172
            MYS+ G +     LF+ + ++D++SW ++I G+ + G   EAL+V REM       P+E
Sbjct: 178 TMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNE 237

Query: 173 VAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLF 232
               S       V   + G+ IH   ++   D  L   +  +L DMY++C NL  A+  F
Sbjct: 238 FHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDL--YVGCSLSDMYARCKNLDSARVAF 295

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
            R+    +VSW  +++ Y     ++E + LF+EM +  + P  IT+  L+  C     L 
Sbjct: 296 YRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALY 355

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
            G+ +H+Y+++ G +  +++ N+L+ MY +C ++ SA  +F  +K +DV+ WN++++A A
Sbjct: 356 HGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKDQDVVTWNSILTACA 415

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
           Q +  ++  +LF  +  S+   + +++  +LS   E G  EM K +H Y  K GL  D +
Sbjct: 416 QHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRM 475

Query: 413 LKTALVDMYAKCGDVNGAYRLFS-EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
           L   L+D YAKCG ++ A RLF      RD+  W++++ GY   G  +EA   F  M   
Sbjct: 476 LSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSL 535

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
           G++PN +TFIG+L ACS  G V EG   +  M    G+VP  EH  C+VDLL RAG L E
Sbjct: 536 GIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARAGKLTE 595

Query: 532 AHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAV 591
           A   I  MP  P++I+W  LLAASK+H +  MG+ AA  IL I+P +    VL+ NIYA 
Sbjct: 596 AANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAA 655

Query: 592 ANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +  WN+ A +++ M+   VKK PG S V++ G +  FI
Sbjct: 656 SGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFI 693



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 125/287 (43%), Gaps = 35/287 (12%)

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLA-------MANALVDMYGKCREIRSARTL 332
           +L+  C  +  L  G+ +H +++ +      A       + N L+ MYG+          
Sbjct: 49  ALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGR---------- 98

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
                  + + W +VI+A+ Q      A  LF  M  S    ++  +   +  CTE G +
Sbjct: 99  -------NPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDV 151

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
             G+ +H +  K     D+I++ ALV MY+K G V+  + LF     +D+  W +++AG+
Sbjct: 152 GTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGF 211

Query: 453 GMHGCGEEALIFFVDMERSGV-KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
              G   EAL  F +M   G   PN   F     AC   G    G+      +HGL +  
Sbjct: 212 AQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQ-----IHGLSIKY 266

Query: 512 KIE---HYGC-MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +++   + GC + D+  R   LD A      +   P+++ W +++ A
Sbjct: 267 RLDRDLYVGCSLSDMYARCKNLDSARVAFYRIEA-PDLVSWNSIVNA 312


>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g22410, mitochondrial-like [Cucumis sativus]
          Length = 681

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 216/588 (36%), Positives = 326/588 (55%), Gaps = 39/588 (6%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMP 133
           ++L+AC  +      KEIH   I  GL  D +  + L+     SE  +L     + +   
Sbjct: 59  SLLEACTSMAKM---KEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAA 115

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGK 192
           N +  SW+  IRGY     P  A+ + R M R     P       +  + A  +      
Sbjct: 116 NLNXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTAN 175

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
            I   V++   D  L V    A+I +   CG L  A++LF+      +VSW  +I+GY+R
Sbjct: 176 EILGHVIQLGFDSDLFVH--NAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVR 233

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
           C   +E   L+ +M E NV P E+T++ ++     +  L LG+ LH  I   G   ++ +
Sbjct: 234 CGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPL 293

Query: 313 ANALVDMYGKCREIRSARTLFDGM-------------------------------KSKDV 341
           ANAL+DMY KC+ I +A+ LF+ M                                 KDV
Sbjct: 294 ANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDV 353

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           ++WNA+I  + QA    +A  LF  M+ S V P+++T+V  LS C++ GAL++G W+H Y
Sbjct: 354 VLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHY 413

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
           ++K  L ++V L TALVDMYAKCG++  A ++F E   R+   W A++ G  +HG    A
Sbjct: 414 VDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAA 473

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVD 521
           + +F +M   G+ P+ ITFIG+L+AC H GLV +G+  F +M    G+ PK++HY C+VD
Sbjct: 474 ISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVD 533

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGY 581
           LLGRAG L+EA E+I+SMP  P+ +VWGAL   S++H N  MGE AA+++LE++P + G 
Sbjct: 534 LLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGI 593

Query: 582 NVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            VL++N+Y  AN W     VR++M+E  V+K PG SS+E+NGLV+ FI
Sbjct: 594 YVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFI 641



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 163/540 (30%), Positives = 270/540 (50%), Gaps = 59/540 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +N  +  Y+++  P +A+ +Y  M + GS + DN+T P + K CA   ++    EI G  
Sbjct: 122 WNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHV 181

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           I+ G D D +V NA+I +   CG L++AR LFDE   RD+VSW+++I GY R GL +EA 
Sbjct: 182 IQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAF 241

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIAT 213
           ++  +M  +++ P EV MI +VS  A + ++ LG+ +H  +      E++G    V +A 
Sbjct: 242 DLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSI------EEMGLNLTVPLAN 295

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF- 272
           AL+DMY KC N+  AK LF  + + +VVSWT M+ GY +   +   VRLF EM E++V  
Sbjct: 296 ALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVL 355

Query: 273 ------------------------------PSEITILSLIIECGFVGGLQLGKWLHAYIL 302
                                         P +IT+++ +  C  +G L +G W+H Y+ 
Sbjct: 356 WNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVD 415

Query: 303 RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
           ++    ++A+  ALVDMY KC  I+ A  +F+ M  ++ + W A+I   A       A  
Sbjct: 416 KHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAIS 475

Query: 363 LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-WLHTYIEKQGLEVDVILKTALVDMY 421
            F  M    + P+E+T +G+LS C   G ++ G+ + +    K G+   +   + LVD+ 
Sbjct: 476 YFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLL 535

Query: 422 AKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHG---CGEEALIFFVDMERSGVKPNG 477
            + G +  A  L     +  D  +W A+  G  +HG    GE A    ++++      +G
Sbjct: 536 GRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPH----DG 591

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVP---KIEHYGCMVDLLGRAGLLDEAH 533
             ++ L N    A +  + + V   M   G+   P    IE  G + D + R    D++H
Sbjct: 592 GIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIR----DKSH 647



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 200/413 (48%), Gaps = 44/413 (10%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  +NS++  Y++      A ++Y  M +     D  T+  ++ A AQ+    LG++
Sbjct: 218 VRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRK 277

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H    + GL+    ++NAL+ MY +C ++ +A+ LF+ M  + VVSW+TM+ GY + GL
Sbjct: 278 LHQSIEEMGLNLTVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGL 337

Query: 153 -----------PE--------------------EALEVMREMRFMDIRPSEVAMISMVSL 181
                      PE                    EAL +  EM+   + P ++ +++ +S 
Sbjct: 338 LESAVRLFNEMPEKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSA 397

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
            + +  +D+G  +H  V ++  +  + VA+ TAL+DMY+KCGN+  A Q+F  +   + +
Sbjct: 398 CSQLGALDVGIWMHHYVDKH--NLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSL 455

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK-WLHAY 300
           +WT +I G     + +  +  F+EMI   + P EIT + ++  C   G +  G+ + +  
Sbjct: 456 TWTAIICGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQM 515

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVI---SAYAQAHC 356
             + G    L   + LVD+ G+   +  A  L   M    D ++W A+      +   H 
Sbjct: 516 TSKYGISPKLKHYSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHM 575

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLS-LCTEAGALEMGKWLHTYIEKQGLE 408
            ++A       K+ ++ P++  +  LL+ +  +A   E  + +   +E++G+E
Sbjct: 576 GERAAS-----KLLELDPHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVE 623


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 198/596 (33%), Positives = 332/596 (55%), Gaps = 4/596 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + S+++ Y +  +  +A+ +Y  M ++G   D+FT  +I+K+C+ +    L +++H 
Sbjct: 164 VVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHA 223

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K+    D    NALI MY++   +  A  +F  +  +D++SW +MI G+ + G   E
Sbjct: 224 HVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELE 283

Query: 156 ALEVMREMRFMDI-RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           AL   REM    + +P+E    S  S  + + + D G+ IH   ++      L      +
Sbjct: 284 ALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAG--CS 341

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L DMY+KCG L  A+ +F  + +  +V+W  +I+G+   +   E    F++M    + P+
Sbjct: 342 LCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPN 401

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           ++T+LSL+  C     L  G  +H+YI++ GF   + + N+L+ MY KC  +  A  +F+
Sbjct: 402 DVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFE 461

Query: 335 GMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
            + +K D++ WN +++A  Q +   +   L   M  S+++P+ VT+  +L    +  + E
Sbjct: 462 DIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYE 521

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           +G  +H +I K GL +D+ +  AL++MY KCG +  A ++F      DI  W++++ GY 
Sbjct: 522 VGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYA 581

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
             GCG+EA   F  M   GVKPN ITF+G+L ACSH G+V EG  ++  M     + P  
Sbjct: 582 QAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTK 641

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EH  CMVDLL RAG LD A + I+ MP  P+++VW  LLAA K+H N  +G+ AA  +L+
Sbjct: 642 EHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLK 701

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           I+P N    V++ NI+A +  W D A +R  M+ + V K PG S +E+   VH F+
Sbjct: 702 IDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWIEIKDKVHVFL 757



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 152/544 (27%), Positives = 268/544 (49%), Gaps = 19/544 (3%)

Query: 18  AHI-IKTHFKFSYTNIINPLT---RYNSLVTSYIKNNKPSSALNIYAFMRK-NGSEVDNF 72
           +HI + T   FS      PLT    ++  + S  K N    AL  +   +K + S + + 
Sbjct: 44  SHIRLNTQLAFSPC----PLTVHYPHDDKIISLCKKNLHREALKAFDIFQKCSSSPLKSV 99

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           T   ++ AC+ +     G++IH   +      D  + N ++ MY +CGSL  AR +FD M
Sbjct: 100 TYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSM 159

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           P ++VVSW++MI GY R G  + A+ +  +M      P      S+V   + + D  L +
Sbjct: 160 PLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLAR 219

Query: 193 AIHACVVRNCKDEKLGVAI--ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
            +HA V+++    + G  +    ALI MY+K   +A A  +F+R+    ++SW  MI+G+
Sbjct: 220 QLHAHVLKS----EFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGF 275

Query: 251 IRCNEINEGVRLFAEMIEENVF-PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
            +     E +  F EM+ ++V+ P+E    S    C  +     G+ +H   ++ G    
Sbjct: 276 SQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSD 335

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           L    +L DMY KC  + SART+F  ++  D++ WNA+I+ +A      ++   F  M+ 
Sbjct: 336 LFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRH 395

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
           + + PN+VT++ LL  C+E   L  G  +H+YI K G  +D+ +  +L+ MY+KC ++N 
Sbjct: 396 TGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLND 455

Query: 430 AYRLFSEAIYR-DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
           A ++F +   + DI  WN ++          E L     M  S +KP+ +T   +L +  
Sbjct: 456 ALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSG 515

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
                  G  +   ++   GL   I     ++++  + G L+ A +M  S+   P++I W
Sbjct: 516 QIASYEVGSQIHCFIMKS-GLNLDISVSNALINMYTKCGSLECARKMFDSIG-NPDIISW 573

Query: 549 GALL 552
            +L+
Sbjct: 574 SSLI 577



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 219/448 (48%), Gaps = 16/448 (3%)

Query: 149 RGGLPEEALEVMREMRFMDIRP-SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
           +  L  EAL+     +     P   V    +++  + +  ++ G+ IH  ++  C  +  
Sbjct: 74  KKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHML-TCNYQP- 131

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            + +   ++ MY KCG+L  A+ +F+ +   +VVSWT MISGY R  E +  + L+ +M+
Sbjct: 132 DMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQML 191

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
                P   T  S++  C  +   +L + LHA++L++ F   L   NAL+ MY K  ++ 
Sbjct: 192 RSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMA 251

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK----VSKVRPNEVTMVGLL 383
            A  +F  +  KD++ W ++I+ ++Q   +    E   H +     S  +PNE       
Sbjct: 252 DAINVFSRIIIKDLISWGSMIAGFSQ---LGYELEALCHFREMLSQSVYQPNEFVFGSAF 308

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
           S C++    + G+ +H    K GL  D+    +L DMYAKCG +  A  +F      D+ 
Sbjct: 309 SACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLV 368

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            WNA++AG+      +E+  FF  M  +G+ PN +T + LL ACS   ++  G  V   +
Sbjct: 369 AWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYI 428

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
           V  +G    I     ++ +  +   L++A ++ + +  + +++ W  LL A  L +N + 
Sbjct: 429 VK-MGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTAC-LQQNQAG 486

Query: 564 GEIAATQIL---EIEPQNYGY-NVLMSN 587
             +  T+++    I+P +    NVL+S+
Sbjct: 487 EVLRLTKLMFASRIKPDHVTLTNVLVSS 514



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 183/356 (51%), Gaps = 24/356 (6%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSY--IKNNKPSSALNI 58
           M  K GFL  E  R    HI K             L  +N+++  +  + N K SS+   
Sbjct: 345 MYAKCGFL--ESARTVFYHIEKPD-----------LVAWNAIIAGFASVSNAKESSSF-- 389

Query: 59  YAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSE 118
           ++ MR  G   ++ T+ ++L AC++ +M + G ++H + +K G + D  V N+L+ MYS+
Sbjct: 390 FSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSK 449

Query: 119 CGSLVSARYLFDEMPNR-DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMIS 177
           C +L  A  +F+++ N+ D+VSW+T++    +     E L + + M    I+P  V + +
Sbjct: 450 CSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTN 509

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
           ++     +A  ++G  IH  ++++     L ++++ ALI+MY+KCG+L  A+++F+ +  
Sbjct: 510 VLVSSGQIASYEVGSQIHCFIMKS--GLNLDISVSNALINMYTKCGSLECARKMFDSIGN 567

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
             ++SW+ +I GY +     E   LF  M    V P+EIT + ++  C  +G ++ G  L
Sbjct: 568 PDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKL 627

Query: 298 HAYILRNGFEFSLAM--ANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
           +   ++  +  S      + +VD+  +   +  A      M    DV++W  +++A
Sbjct: 628 YR-TMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAA 682


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 209/603 (34%), Positives = 333/603 (55%), Gaps = 40/603 (6%)

Query: 64  KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMY--SECGS 121
           + G+EV++  I   +  C   +     K+IH   ++     D Y ++ L+  Y  S C  
Sbjct: 65  EKGNEVESTNILEFIDQCTNTMQL---KQIHAHMLRTSRFCDPYTASKLLTAYAISSCSC 121

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVS 180
           L+ A+ +F+++P  ++  W+T+IRGY     P ++  +   M       P++     +  
Sbjct: 122 LIYAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFK 181

Query: 181 LFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
             + +  + LG  +H  V++      L   I  +LI+ Y   G    A ++F  +    V
Sbjct: 182 AASRLKVLHLGSVLHGMVIKASLSSDL--FILNSLINFYGSSGAPDLAHRVFTNMPGKDV 239

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           VSW  MI+ +      ++ + LF EM  ++V P+ IT++S++  C     L+ G+W+ +Y
Sbjct: 240 VSWNAMINAFALGGLPDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSY 299

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM------------------ 342
           I  NGF   L + NA++DMY KC  I  A+ LF+ M  KD++                  
Sbjct: 300 IENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEA 359

Query: 343 -------------IWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTE 388
                         WNA+ISAY Q      A  LF  M++SK  +P+EVT++  L    +
Sbjct: 360 HCIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQ 419

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
            GA++ G W+H YI+K  + ++  L T+L+DMYAKCG++N A  +F     +D+ +W+AM
Sbjct: 420 LGAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAM 479

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +    M+G G+ AL  F  M  + +KPN +TF  +L AC+HAGLV EG+ +F++M    G
Sbjct: 480 IGALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYG 539

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
           +VP+I+HY C+VD+ GRAGLL++A   I+ MP+ P   VWGALL A   H N  + E+A 
Sbjct: 540 IVPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAY 599

Query: 569 TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
             +LE+EP N+G  VL+SNIYA A  W  V+ +R++M++  VKKEP  SS++VNG+VH+F
Sbjct: 600 QNLLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEF 659

Query: 629 IRG 631
           + G
Sbjct: 660 LVG 662



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 154/545 (28%), Positives = 264/545 (48%), Gaps = 66/545 (12%)

Query: 9   NLEQTRQCHAHIIKT-HFKFSYT--------------------NIINPLTR-----YNSL 42
           N  Q +Q HAH+++T  F   YT                    N+ N + +     +N+L
Sbjct: 84  NTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQPNLYCWNTL 143

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDN-FTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           +  Y  ++ P+ +  I+  M  + SE  N FT P + KA +++ + HLG  +HG  IK  
Sbjct: 144 IRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKAS 203

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
           L  D ++ N+LI  Y   G+   A  +F  MP +DVVSW+ MI  +  GGLP++AL + +
Sbjct: 204 LSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQ 263

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
           EM   D++P+ + M+S++S  A   D++ G+ I + +  N   E L   +  A++DMY K
Sbjct: 264 EMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHL--ILNNAMLDMYVK 321

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE----------------------- 258
           CG +  AK LFN++++  +VSWT M+ G+ +    +E                       
Sbjct: 322 CGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAY 381

Query: 259 --------GVRLFAEM-IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
                    + LF EM + ++  P E+T++  +     +G +  G W+H YI ++    +
Sbjct: 382 EQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLN 441

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
             +A +L+DMY KC  +  A  +F  ++ KDV +W+A+I A A       A +LF  M  
Sbjct: 442 CHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALDLFSSMLE 501

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK-QGLEVDVILKTALVDMYAKCGDVN 428
           + ++PN VT   +L  C  AG +  G+ L   +E   G+   +     +VD++ + G + 
Sbjct: 502 AYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLE 561

Query: 429 GAYRLFSE-AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP-NGITFIGLLNA 486
            A     +  I     +W A++     HG  E A + + ++    ++P N   F+ L N 
Sbjct: 562 KAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLE--LEPCNHGAFVLLSNI 619

Query: 487 CSHAG 491
            + AG
Sbjct: 620 YAKAG 624



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 59/269 (21%), Positives = 116/269 (43%), Gaps = 14/269 (5%)

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYA--KCGDVNGA 430
           + NEV    +L    +       K +H ++ +     D    + L+  YA   C  +  A
Sbjct: 66  KGNEVESTNILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYA 125

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK-PNGITFIGLLNACSH 489
             +F++    ++  WN ++ GY       ++ + F+ M  S  + PN  TF  L  A S 
Sbjct: 126 KNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASR 185

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
             ++  G SV   MV    L   +     +++  G +G  D AH +  +MP + +++ W 
Sbjct: 186 LKVLHLG-SVLHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGK-DVVSWN 243

Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVL-MSNIYAVANRWNDVAGVRRVMKEI 608
           A++ A  L   P   + A     E+E ++   NV+ M ++ +   +  D+   R +   I
Sbjct: 244 AMINAFALGGLP---DKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYI 300

Query: 609 RVKKEPGFSS--VEVNGLVHKFIRGGMVN 635
              +  GF+   +  N ++  +++ G +N
Sbjct: 301 ---ENNGFTEHLILNNAMLDMYVKCGCIN 326


>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 1131

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/585 (34%), Positives = 337/585 (57%), Gaps = 6/585 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  + +N      +  +++M+++G + D FT  +I  ACA +     G ++H   I
Sbjct: 378 WNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMI 437

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KN    + +V+NAL+ MY++ G+L  AR  F+ M   D VSW+ +I GY +    +EA  
Sbjct: 438 KNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFF 497

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R M    + P EV++ S+VS  A+V +   G+  H  +V+   D        ++LIDM
Sbjct: 498 MFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTS--TCAGSSLIDM 555

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCG +  A+ +F  +   +VVS   +I+GY   + + E + LF E+    + P+E+T 
Sbjct: 556 YVKCGVVLAARDVFYSMPYRNVVSINALIAGYTM-SHLEEAIHLFQEIQMVGLKPTEVTF 614

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN-ALVDMYGKCREIRSARTLFDGMK 337
             L+  C     L LG+ +H  +++ GF  S  M   +L+ MY   +    + TLF  ++
Sbjct: 615 AGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQ 674

Query: 338 -SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             K +++W A+IS YAQ +  +KA + + HM+   + P++ T   +L  C    +L+ G+
Sbjct: 675 YPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQ 734

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD-ICMWNAMMAGYGMH 455
            +H+ I   G  +D I  ++L+DMYAKCGDV G+ ++F E   R+ +  WN+M+ G   +
Sbjct: 735 EVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIVGLAKN 794

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  EEAL  F  ME+  + P+ +TF+G+L+ACSHAG V+EG+ VFD MV+   L P+++H
Sbjct: 795 GYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDH 854

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
            GCMVD+LGR G L+EA E I  +  + + ++W  LL A + H +   G+ AA +++E++
Sbjct: 855 LGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAANKLMELK 914

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
           PQ+    VL+S +YA +  W+    +RR MK   VKK PG+S +E
Sbjct: 915 PQSSSSYVLLSGLYAESENWSGADSLRREMKLKGVKKLPGYSWIE 959



 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 150/529 (28%), Positives = 280/529 (52%), Gaps = 11/529 (2%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +T I NP +  +N +++ + K      A++ +  ++K G +    ++ ++L A A + M 
Sbjct: 266 FTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSML 325

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
           + G  +H  AIK GLD + YV +AL+ MY++C  + +A+ +F+ +  R++V W+ M+ G+
Sbjct: 326 NYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGF 385

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
            + GL +E +E    M+    +P E    S+ S  A +  +D G  +H  +++N     L
Sbjct: 386 AQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNL 445

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            V  A AL+DMY+K G L  A++ F  +  +  VSW  +I GY++    +E   +F  M+
Sbjct: 446 FV--ANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMV 503

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
              V P E+++ S++  C  V   + G+  H  +++ G + S    ++L+DMY KC  + 
Sbjct: 504 SNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVL 563

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           +AR +F  M  ++V+  NA+I+ Y  +H +++A  LF  +++  ++P EVT  GLL  C 
Sbjct: 564 AARDVFYSMPYRNVVSINALIAGYTMSH-LEEAIHLFQEIQMVGLKPTEVTFAGLLDGCD 622

Query: 388 EAGALEMGKWLHTYIEKQG-LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY-RDICMW 445
            A  L +G+ +H  + K G L    ++  +L+ MY        +  LFSE  Y + + +W
Sbjct: 623 GAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVW 682

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
            A+++GY      E+AL F+  M    + P+  TF  +L AC+    +  G+ V   + H
Sbjct: 683 TALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHSLIFH 742

Query: 506 GLGLVPKIEHYGC--MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
             G    ++   C  ++D+  + G +  + ++   MP R ++I W +++
Sbjct: 743 -TGF--NMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMI 788



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 235/461 (50%), Gaps = 38/461 (8%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+  Y+++  P  A+ ++  M++ G   D   + T++ A                  
Sbjct: 211 WTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINA------------------ 252

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
                            Y   G L  AR LF ++PN +VV+W+ MI G+ + G  EEA+ 
Sbjct: 253 -----------------YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAIS 295

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
              E++   ++ +  ++ S++S  A ++ ++ G  +HA  ++   D+   V + +AL++M
Sbjct: 296 FFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDN--VYVGSALVNM 353

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KC  +  AKQ+FN L + ++V W  M+ G+ +     E +  F+ M      P E T 
Sbjct: 354 YAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTF 413

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S+   C  +  L  G  LH  +++N F  +L +ANALVDMY K   ++ AR  F+ MK 
Sbjct: 414 TSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKI 473

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D + WNA+I  Y Q    D+AF +F  M  + V P+EV++  ++S C      + G+  
Sbjct: 474 HDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQC 533

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + K GL+      ++L+DMY KCG V  A  +F    YR++   NA++AGY M    
Sbjct: 534 HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSHL- 592

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           EEA+  F +++  G+KP  +TF GLL+ C  A ++  G+ +
Sbjct: 593 EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQI 633



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 270/548 (49%), Gaps = 40/548 (7%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++ Y+ +   ++ +  +  M  +G   + FT   +L AC+ +   + GK++H    
Sbjct: 110 WNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVF 169

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G    ++    LI MY++C +L  AR +FD   N D VSW+T+I GY R G P EA++
Sbjct: 170 KMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVK 229

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V  +M+ +   P ++A+++                                     +I+ 
Sbjct: 230 VFDKMQRVGHVPDQIALVT-------------------------------------VINA 252

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y   G LA A++LF ++   +VV+W VMISG+ +     E +  F E+ +  +  +  ++
Sbjct: 253 YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++     +  L  G  +HA  ++ G + ++ + +ALV+MY KC ++ +A+ +F+ +  
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +++++WNA++  +AQ     +  E F +MK    +P+E T   + S C     L+ G  L
Sbjct: 373 RNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQL 432

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           HT + K     ++ +  ALVDMYAK G +  A + F      D   WNA++ GY      
Sbjct: 433 HTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYN 492

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +EA   F  M  +GV P+ ++   +++AC++     +G+     +V  +GL         
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVK-VGLDTSTCAGSS 551

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL-HKNPSMGEIAATQILEIEPQ 577
           ++D+  + G++  A ++  SMP R N++   AL+A   + H   ++      Q++ ++P 
Sbjct: 552 LIDMYVKCGVVLAARDVFYSMPYR-NVVSINALIAGYTMSHLEEAIHLFQEIQMVGLKPT 610

Query: 578 NYGYNVLM 585
              +  L+
Sbjct: 611 EVTFAGLL 618



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 230/478 (48%), Gaps = 49/478 (10%)

Query: 79  KACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVV 138
           KA  Q L T   K IH  ++K G+     + N ++ +Y +CG++  A+  F  +  +DV 
Sbjct: 51  KAVLQALST--AKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVF 108

Query: 139 SWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACV 198
           +W++++  Y   GL    ++    M    +RP+E     ++S  + + D++ GK +H   
Sbjct: 109 AWNSVLSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVH--- 165

Query: 199 VRNCKDEKLGVAIAT----ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
              C   K+G    +     LIDMY+KC NL  A+ +F+       VSWT +I+GY+R  
Sbjct: 166 ---CGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDG 222

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
              E V++F +M      P +I ++++I                               N
Sbjct: 223 FPMEAVKVFDKMQRVGHVPDQIALVTVI-------------------------------N 251

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
           A V +      +  AR LF  + + +V+ WN +IS +A+    ++A   F+ +K + ++ 
Sbjct: 252 AYVAL----GRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKA 307

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
              ++  +LS       L  G  +H    K+GL+ +V + +ALV+MYAKC  ++ A ++F
Sbjct: 308 TRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVF 367

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
           +    R+I +WNAM+ G+  +G  +E + FF  M+R G +P+  TF  + +AC+    + 
Sbjct: 368 NSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLD 427

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
            G  +   M+        +     +VD+  ++G L EA +  + M +  N + W A++
Sbjct: 428 FGGQLHTVMIKN-KFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDN-VSWNAII 483



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 172/367 (46%), Gaps = 41/367 (11%)

Query: 192 KAIHACVVRNCKDEKLGVAI----ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           +A+    V + K  K+GV +       ++D+Y KCGN+ +A++ F+RL +  V +W  ++
Sbjct: 55  QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           S Y+        V+ F  M    V P+E T   ++  C  +  +  GK +H  + + GF 
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFG 174

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
           F       L+DMY KCR +R AR +FDG  + D + W  +I+ Y +     +A ++F  M
Sbjct: 175 FRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKM 234

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           +     P+++ +V                                    +++ Y   G +
Sbjct: 235 QRVGHVPDQIALV-----------------------------------TVINAYVALGRL 259

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             A +LF++    ++  WN M++G+   G  EEA+ FF++++++G+K    +   +L+A 
Sbjct: 260 ADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAI 319

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           +   ++  G  V  + +   GL   +     +V++  +   +D A ++  S+  R N+++
Sbjct: 320 ASLSMLNYGSMVHAQAIKE-GLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGER-NIVL 377

Query: 548 WGALLAA 554
           W A+L  
Sbjct: 378 WNAMLGG 384



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 120/244 (49%), Gaps = 3/244 (1%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           FS       L  + +L++ Y + N    AL  Y  MR +    D  T  ++L+ACA +  
Sbjct: 670 FSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSS 729

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD-VVSWSTMIR 145
              G+E+H      G + D    ++LI MY++CG +  +  +F EMP R+ V+SW++MI 
Sbjct: 730 LQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIV 789

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           G  + G  EEALE+ ++M    I P EV  + ++S  +    V  G+ +   +V N K +
Sbjct: 790 GLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQ 849

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFA 264
              V     ++D+  + G L  A++  N+L  +   + W+ ++    +  +   G R   
Sbjct: 850 PR-VDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAAN 908

Query: 265 EMIE 268
           +++E
Sbjct: 909 KLME 912


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 198/541 (36%), Positives = 317/541 (58%), Gaps = 39/541 (7%)

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           +F+ +P  + + W+ M RG+     P  AL++   M  + + P+      ++   A    
Sbjct: 31  VFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKT 90

Query: 188 VDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ---------- 237
              G+ IH  V++   D  L + + T+LI MY++ G L  A+++F+R +           
Sbjct: 91  FKEGQQIHGHVLKLGFD--LDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALI 148

Query: 238 ---------------------NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
                                  VVSW  MISGY       + + LF EM++ NV P E 
Sbjct: 149 TGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDES 208

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T+ +++  C   G ++LG+ +H++I  +GF  +L + NAL+D+Y KC E+ +A  L +G+
Sbjct: 209 TMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGL 268

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
            +KDV+ WN +I  Y   +   +A  LF  M  S   PN+VTM+ +L  C   GA+++G+
Sbjct: 269 SNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 328

Query: 397 WLHTYIEKQGLEVDVI----LKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAG 451
           W+H YI+K+   V V     L+T+L+DMYAKCGD++ A ++  S A  R +  WNAM+ G
Sbjct: 329 WIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFG 388

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           + MHG    A   F  M ++G++P+ ITF+GLL+ACSH+G++  G+++F  M     + P
Sbjct: 389 FAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITP 448

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
           K+EHYGCM+DLLG +GL  EA EMI +MP+ P+ ++W +LL A K+H N  +GE  A ++
Sbjct: 449 KLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKL 508

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE-PGFSSVEVNGLVHKFIR 630
           ++IEP+N G  VL+SNIYA A +WN+V  +R ++ +  +KK+ PG SS+E++ +VH+FI 
Sbjct: 509 IKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDSVVHEFII 568

Query: 631 G 631
           G
Sbjct: 569 G 569



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 153/504 (30%), Positives = 252/504 (50%), Gaps = 75/504 (14%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N +   +  ++ P SAL +Y  M   G   + FT P +LK+CA+      G++IHG  +
Sbjct: 43  WNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVL 102

Query: 99  KNGLDGDAYVSNALIQMYSECGSL-------------------------------VSARY 127
           K G D D YV  +LI MY++ G L                                SA+ 
Sbjct: 103 KLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQK 162

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           +FDE+P +DVVSW+ MI GY   G  ++ALE+ +EM   +++P E  M ++VS  A    
Sbjct: 163 MFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGS 222

Query: 188 VDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           ++LG+ +H+ +     D   G  + I  ALID+YSKCG +  A +L   L+   V+SW  
Sbjct: 223 IELGRQVHSWI----NDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNT 278

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR-- 303
           +I GY   N   E + LF EM+     P+++T+LS++  C  +G + +G+W+H YI +  
Sbjct: 279 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKL 338

Query: 304 NGFEFSLA--MANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISAYAQAHCIDKA 360
            G   + A  +  +L+DMY KC +I +A  + D    ++ +  WNA+I  +A     + A
Sbjct: 339 KGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAA 398

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
           F++F  M+ + + P+++T VGLLS C+ +G L++G+ +   + +Q   +     T  ++ 
Sbjct: 399 FDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSM-RQDYNI-----TPKLEH 452

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           Y    D+ G   LF EA                      E +I  + ME     P+G+ +
Sbjct: 453 YGCMIDLLGHSGLFKEA----------------------EEMINTMPME-----PDGVIW 485

Query: 481 IGLLNACSHAGLVTEGKSVFDKMV 504
             LL AC   G +  G+S   K++
Sbjct: 486 CSLLKACKIHGNLELGESFAKKLI 509



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 196/398 (49%), Gaps = 36/398 (9%)

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           L YA  +F  + + + + W +M  G+   ++    ++L+  MI   + P+  T   L+  
Sbjct: 25  LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY---GKCRE---------------- 325
           C      + G+ +H ++L+ GF+  L +  +L+ MY   G+  +                
Sbjct: 85  CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSY 144

Query: 326 ------------IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
                       I SA+ +FD +  KDV+ WNA+IS YA+     KA ELF  M  + V+
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVK 204

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           P+E TM  ++S C ++G++E+G+ +H++I   G   ++ +  AL+D+Y+KCG+V  A  L
Sbjct: 205 PDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACEL 264

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
                 +D+  WN ++ GY      +EAL+ F +M RSG  PN +T + +L AC+H G +
Sbjct: 265 LEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 324

Query: 494 TEGKSV---FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
             G+ +    DK + G+ +         ++D+  + G +D A ++  S     ++  W A
Sbjct: 325 DIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNA 384

Query: 551 LLAASKLH--KNPSMGEIAATQILEIEPQNYGYNVLMS 586
           ++    +H   N +    +  +   IEP +  +  L+S
Sbjct: 385 MIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLS 422



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 197/390 (50%), Gaps = 18/390 (4%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I  +  +N++++ Y +      AL ++  M K   + D  T+ T++ ACAQ     LG++
Sbjct: 169 IKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQ 228

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H +   +G   +  + NALI +YS+CG + +A  L + + N+DV+SW+T+I GY    L
Sbjct: 229 VHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLIGGYTHMNL 288

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL--GVA 210
            +EAL + +EM      P++V M+S++   A +  +D+G+ IH  + +  K   +    +
Sbjct: 289 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASS 348

Query: 211 IATALIDMYSKCGNLAYAKQL-----FNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           + T+LIDMY+KCG++  A Q+     FNR    S+ +W  MI G+      N    +F+ 
Sbjct: 349 LRTSLIDMYAKCGDIDAAPQVSDSSAFNR----SLSTWNAMIFGFAMHGRANAAFDIFSR 404

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS--LAMANALVDMYGKC 323
           M +  + P +IT + L+  C   G L LG+ +    +R  +  +  L     ++D+ G  
Sbjct: 405 MRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRS-MRQDYNITPKLEHYGCMIDLLGHS 463

Query: 324 REIRSARTLFDGMK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP-NEVTMVG 381
              + A  + + M    D +IW +++ A  + H   +  E F   K+ K+ P N  + V 
Sbjct: 464 GLFKEAEEMINTMPMEPDGVIWCSLLKA-CKIHGNLELGESFAK-KLIKIEPENPGSYVL 521

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
           L ++   AG       + T +  +G++  V
Sbjct: 522 LSNIYATAGKWNEVXKIRTLLNDKGMKKKV 551


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 222/650 (34%), Positives = 340/650 (52%), Gaps = 29/650 (4%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTNIINPLTRY-------------------------NSLV 43
           +L++ R  HA IIK     S   + N L  +                         N L+
Sbjct: 22  SLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLI 81

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
             Y +     S+  +  F R     +  +  T   I  A + +     G++ H  AIK  
Sbjct: 82  NGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMA 141

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
              D +V ++L+ MY + G L  AR +FD MP R+ V+W+TMI GY    L  EA EV  
Sbjct: 142 CFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFE 201

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
            MR  +   +E A  S++S  A    VD GK IH   V+      + ++I  AL+ MY+K
Sbjct: 202 LMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKT--GLLVFLSILNALVTMYAK 259

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
           CG+L  + Q+F   N  + ++W+ MI+GY +  + ++ ++LF+ M    + PSE T++ +
Sbjct: 260 CGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLVGV 319

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +  C     ++ GK +H Y+L+ GFE  L +  ALVDMY K      AR  F+ ++  D+
Sbjct: 320 LNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDL 379

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           ++W ++I+ Y Q    + A  L+  M++  + PNE+TM  +L  C+   A + G+ +H  
Sbjct: 380 VLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHAR 439

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
             K GL ++V + +AL  MYAKCG++     +F     RDI  WNAM++G   +G G+EA
Sbjct: 440 TIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEA 499

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVD 521
           L  F +M +   KP+ +TF+ +L+ACSH GLV  G   F  M    GL+PK+EHY CMVD
Sbjct: 500 LELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPKVEHYACMVD 559

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGY 581
           +L RAG L EA E I+S  +   + +W  LL A + ++N  +G  A  +++E+  Q    
Sbjct: 560 VLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSA 619

Query: 582 NVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            VL+S IY    R  DV  VR +MK   V KEPG S +E+   VH F+ G
Sbjct: 620 YVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSNVHVFVVG 669



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 203/390 (52%), Gaps = 5/390 (1%)

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
           M + P  ++  + +  F     +  G+A+HA +++        + +A +LI+ Y+KC +L
Sbjct: 1   MPLHPQNLSSFNSLVQFTHQKSLQKGRALHAQIIKLASSSSC-IYLANSLINFYAKCCHL 59

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG--VRLFAEMIEENVFPSEITILSLII 283
             AK +F+R++   V+SW  +I+GY +         + LF  M  +N+ P+  T   +  
Sbjct: 60  PKAKLVFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFT 119

Query: 284 ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
               +  +  G+  HA  ++    + + + ++L++MY K   +  AR +FD M  ++ + 
Sbjct: 120 AASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVT 179

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           W  +IS YA      +AFE+F  M+  +   NE     +LS       ++ GK +H    
Sbjct: 180 WATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAV 239

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
           K GL V + +  ALV MYAKCG ++ + ++F  +  ++   W+AM+ GY   G   +AL 
Sbjct: 240 KTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALK 299

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL 523
            F  M  +G+ P+  T +G+LNACS A  V EGK V + ++  LG   ++     +VD+ 
Sbjct: 300 LFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLK-LGFESQLYIMTALVDMY 358

Query: 524 GRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            ++G+ ++A +    +  +P++++W +++A
Sbjct: 359 AKSGVTEDARKGFNYLQ-QPDLVLWTSMIA 387


>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
 gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 687

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 215/630 (34%), Positives = 333/630 (52%), Gaps = 71/630 (11%)

Query: 69  VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYL 128
           +D+     +L  CA+         +H   IK+    + ++ N LI +Y +CG +  AR L
Sbjct: 17  LDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKL 76

Query: 129 FD-------------------------------EMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           FD                               +MP  D  SW++MI G+ + G  +EAL
Sbjct: 77  FDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEAL 136

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
               +M       +E +  S +S  A + D+ LG  IH+ V R+  +    V + +AL+D
Sbjct: 137 VYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRS--NYLSDVYMGSALVD 194

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYSKCG + YA+ +F+ +   S VSW  +I+ Y +   ++E +++F EMI+  V P E+T
Sbjct: 195 MYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVT 254

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILR-NGFEFSLAMANALVDMYGKCREIRSARTLFD-- 334
           + S++  C  +  ++ G+ +HA +++ + F   L + NAL+DMY KC  I  AR +FD  
Sbjct: 255 LASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMM 314

Query: 335 -----------------------------GMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
                                         M  KDV+ WNA+I+   Q    ++A  LF 
Sbjct: 315 PIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFR 374

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL------EVDVILKTALVD 419
            +K   V P   T   LL+ C     L++G+  H+++ K G       + DV +  +L+D
Sbjct: 375 LLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLID 434

Query: 420 MYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGIT 479
           MY KCG V    R+F   + +D   WNAM+ GY  +G G +AL  F  M  SG  P+ +T
Sbjct: 435 MYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVT 494

Query: 480 FIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM 539
            IG+L ACSHAGL+ EG+  F  M    GL+P  +HY CMVDLLGRAG L+EA  +I+ M
Sbjct: 495 MIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEM 554

Query: 540 PLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVA 599
            ++P+ IVWG+LLAA K+H+N  +GE    ++LE++P+N G  VL+SN+YA    W +V 
Sbjct: 555 SMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVV 614

Query: 600 GVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            VR++M++  V K+PG S +E+ G ++ F+
Sbjct: 615 RVRKLMRQRGVVKQPGCSWIEIQGELNVFM 644



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 146/478 (30%), Positives = 249/478 (52%), Gaps = 45/478 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++ + ++ +   AL  +A M  +G  V+ ++  + L ACA +    LG +IH    
Sbjct: 119 WNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVY 178

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++    D Y+ +AL+ MYS+CG +  A+ +FDEM  R  VSW+++I  Y + G  +EAL+
Sbjct: 179 RSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALK 238

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  EM    + P EV + S+VS  A ++ +  G+ IHA VV+ C + +  + +  AL+DM
Sbjct: 239 IFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVK-CDEFRNDLILGNALLDM 297

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI----------- 267
           Y+KC  +  A+ +F+ +   SVVS T M+SGY + +++     +F+ M+           
Sbjct: 298 YAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALI 357

Query: 268 --------------------EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
                                E+V+P+  T  +L+  C  +  LQLG+  H+++L++GF 
Sbjct: 358 AGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFR 417

Query: 308 FSLA------MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
           F         + N+L+DMY KC  + +   +F  M  KD + WNA+I  YAQ    +KA 
Sbjct: 418 FQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGFGNKAL 477

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-WLHTYIEKQGLEVDVILKTALVDM 420
           E+F  M  S   P+ VTM+G+L  C+ AG L+ G+ +  +   + GL       T +VD+
Sbjct: 478 EVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYTCMVDL 537

Query: 421 YAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH---GCGEEAL--IFFVDMERSG 472
             + G +  A  L  E ++  D  +W +++A   +H     GE  +  +  VD E SG
Sbjct: 538 LGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPENSG 595



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 112/237 (47%), Gaps = 19/237 (8%)

Query: 26  KFSYTNI-INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV 84
           ++ ++N+ +  +  +N+L+    +N +   AL ++  +++      ++T   +L ACA +
Sbjct: 339 RYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANL 398

Query: 85  LMTHLGKEIH------GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVV 138
               LG++ H      GF  + G D D +V N+LI MY +CGS+ +   +F  M  +D V
Sbjct: 399 ADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCV 458

Query: 139 SWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACV 198
           SW+ MI GY + G   +ALEV  +M      P  V MI ++   +    +D G+     +
Sbjct: 459 SWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSM 518

Query: 199 VRN-----CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISG 249
                    KD        T ++D+  + G L  AK L   ++ Q   + W  +++ 
Sbjct: 519 TAQHGLMPLKDH------YTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAA 569



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/168 (19%), Positives = 71/168 (42%), Gaps = 32/168 (19%)

Query: 9   NLEQTRQCHAHIIKTHFKFSY---------TNIINPLTR--------------------- 38
           +L+  RQ H+H++K  F+F Y          ++I+   +                     
Sbjct: 400 DLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVS 459

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK-EIHGFA 97
           +N+++  Y +N   + AL ++  M ++G   D+ T+  +L AC+   +   G+       
Sbjct: 460 WNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMT 519

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR-DVVSWSTMI 144
            ++GL         ++ +    G L  A+ L +EM  + D + W +++
Sbjct: 520 AQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLL 567


>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g04370-like [Glycine max]
          Length = 755

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 199/621 (32%), Positives = 350/621 (56%), Gaps = 14/621 (2%)

Query: 18  AHIIKTHFKFSYTNIINPLTRY---------NSLVTSYIKNNKPSSALNIYAFMRKNGSE 68
           + +I  + KF + ++   +  Y          +++  Y +  +   A +++  MR+ G +
Sbjct: 100 SSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSLFDEMRRQGIQ 159

Query: 69  VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYL 128
             + T+ ++L   ++  + H+ + +HG AI  G   D  +SN+++ +Y +CG++  +R L
Sbjct: 160 PSSVTVLSLLFGVSE--LAHV-QCLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKL 216

Query: 129 FDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV 188
           FD M +RD+VSW+++I  Y + G   E L +++ MR            S++S+ A   ++
Sbjct: 217 FDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGEL 276

Query: 189 DLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
            LG+ +H  ++R      L   + T+LI +Y K G +  A ++F R +   VV WT MIS
Sbjct: 277 KLGRCLHGQILR--AGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMIS 334

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
           G ++    ++ + +F +M++  V PS  T+ S+I  C  +G   LG  +  YILR     
Sbjct: 335 GLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQELPL 394

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
            +A  N+LV MY KC  +  +  +FD M  +D++ WNA+++ YAQ   + +A  LF  M+
Sbjct: 395 DVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMR 454

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
                P+ +T+V LL  C   G L +GKW+H+++ + GL   +++ T+LVDMY KCGD++
Sbjct: 455 SDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLD 514

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A R F++    D+  W+A++ GYG HG GE AL F+     SG+KPN + F+ +L++CS
Sbjct: 515 TAQRCFNQMPSHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCS 574

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           H GLV +G ++++ M    G+ P +EH+ C+VDLL RAG ++EA+ + K     P + V 
Sbjct: 575 HNGLVEQGLNIYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYNVYKKKFPDPVLDVL 634

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
           G +L A + + N  +G+  A  IL + P + G  V +++ YA  N+W +V      M+ +
Sbjct: 635 GIILDACRANGNNELGDTIANDILMLRPMDAGNFVQLAHCYASINKWEEVGEAWTYMRSL 694

Query: 609 RVKKEPGFSSVEVNGLVHKFI 629
            +KK PG+S ++++G +  F 
Sbjct: 695 GLKKIPGWSFIDIHGTITTFF 715



 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 164/519 (31%), Positives = 269/519 (51%), Gaps = 7/519 (1%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           N+ +  +         L  YA M K     D +T P++LKAC+ + +  LG  +H   + 
Sbjct: 30  NATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILV 89

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
           +GL  DAY++++LI  Y++ G    AR +FD MP R+VV W+T+I  Y R G   EA  +
Sbjct: 90  SGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSL 149

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
             EMR   I+PS V ++S++   +++A V   + +H C +         + ++ +++++Y
Sbjct: 150 FDEMRRQGIQPSSVTVLSLLFGVSELAHV---QCLHGCAI--LYGFMSDINLSNSMLNVY 204

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            KCGN+ Y+++LF+ ++   +VSW  +IS Y +   I E + L   M  +       T  
Sbjct: 205 GKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFG 264

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           S++      G L+LG+ LH  ILR GF     +  +L+ +Y K  +I  A  +F+    K
Sbjct: 265 SVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDK 324

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           DV++W A+IS   Q    DKA  +F  M    V+P+  TM  +++ C + G+  +G  + 
Sbjct: 325 DVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSIL 384

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
            YI +Q L +DV  + +LV MYAKCG ++ +  +F     RD+  WNAM+ GY  +G   
Sbjct: 385 GYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVC 444

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           EAL  F +M      P+ IT + LL  C+  G +  GK +   ++   GL P I     +
Sbjct: 445 EALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWIHSFVIRN-GLRPCILVDTSL 503

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           VD+  + G LD A      MP   +++ W A++     H
Sbjct: 504 VDMYCKCGDLDTAQRCFNQMPSH-DLVSWSAIIVGYGYH 541


>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
 gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
          Length = 766

 Score =  383 bits (984), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 206/598 (34%), Positives = 339/598 (56%), Gaps = 5/598 (0%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           NP++ + S++ ++++N +   AL +++ M ++G+  D F + + ++AC ++     G+++
Sbjct: 116 NPVS-WASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQV 174

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           H  A+K+    D  V NAL+ MYS+ G +     LF+ + ++D++SW ++I G+ + G  
Sbjct: 175 HAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFE 234

Query: 154 EEALEVMREMRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            EAL+V REM       P+E    S       V   + G+ IH   ++   D  L V   
Sbjct: 235 MEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVG-- 292

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            +L DMY++C NL  A+  F R+    +VSW  +++ Y     ++E + LF+EM +  + 
Sbjct: 293 CSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLR 352

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P  IT+  L+  C     L  G+ +H+Y+++ G +  +++ N+L+ MY +C ++ SA  +
Sbjct: 353 PDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDV 412

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F  +K +DV+ WN++++A AQ +  ++  +LF  +  S+   + +++  +LS   E G  
Sbjct: 413 FHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYF 472

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS-EAIYRDICMWNAMMAG 451
           EM K +H Y  K GL  D +L   L+D YAKCG ++ A RLF      RD+  W++++ G
Sbjct: 473 EMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVG 532

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           Y   G  +EA   F  M   G++PN +TFIG+L ACS  G V EG   +  M    G+VP
Sbjct: 533 YAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVP 592

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
             EH  C+VDLL RAG L EA   I  MP  P++I+W  LLAASK+H +  MG+ AA  I
Sbjct: 593 TREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGI 652

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           L I+P +    VL+ NIYA +  WN+ A +++ M+   VKK PG S V++ G +  FI
Sbjct: 653 LNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFI 710



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 247/485 (50%), Gaps = 11/485 (2%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNG-------LDGDAYVSNALIQMYSECGSLVSARYL 128
            ++ AC+++     G+ +H   + +        L G+  + N LI MY  C +  SAR +
Sbjct: 49  ALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQV 108

Query: 129 FDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV 188
           FDEMP R+ VSW+++I  + + G   +AL +   M        + A+ S V    ++ DV
Sbjct: 109 FDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDV 168

Query: 189 DLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
             G+ +HA  +++ +   L   +  AL+ MYSK G +     LF R+    ++SW  +I+
Sbjct: 169 GTGRQVHAHALKSERGSDL--IVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226

Query: 249 GYIRCNEINEGVRLFAEMI-EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           G+ +     E +++F EMI E +  P+E    S    CG VG  + G+ +H   ++   +
Sbjct: 227 GFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             L +  +L DMY +C+ + SAR  F  +++ D++ WN++++AY+    + +A  LF  M
Sbjct: 287 RDLYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 346

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           + S +RP+ +T+ GLL  C    AL  G+ +H+Y+ K GL+ DV +  +L+ MYA+C D+
Sbjct: 347 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDL 406

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
           + A  +F E   +D+  WN+++     H   EE L  F  + +S    + I+   +L+A 
Sbjct: 407 SSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSAS 466

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           +  G     K V        GLV        ++D   + G LD+A  + + M    ++  
Sbjct: 467 AELGYFEMVKQVH-AYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFS 525

Query: 548 WGALL 552
           W +L+
Sbjct: 526 WSSLI 530



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 191/391 (48%), Gaps = 8/391 (2%)

Query: 177 SMVSLFADVADVDLGKAIHACVV---RNCKDEKLG--VAIATALIDMYSKCGNLAYAKQL 231
           ++VS  + +  +  G+ +H  +V    +  D +L     +   LI MY +C     A+Q+
Sbjct: 49  ALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQV 108

Query: 232 FNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL 291
           F+ +   + VSW  +I+ +++     + + LF+ M+       +  + S +  C  +G +
Sbjct: 109 FDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDV 168

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
             G+ +HA+ L++     L + NALV MY K   +     LF+ +K KD++ W ++I+ +
Sbjct: 169 GTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGF 228

Query: 352 AQAHCIDKAFELFIHMKVSKV-RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
           AQ     +A ++F  M V     PNE         C   G+ E G+ +H    K  L+ D
Sbjct: 229 AQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRD 288

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
           + +  +L DMYA+C +++ A   F      D+  WN+++  Y + G   EAL+ F +M  
Sbjct: 289 LYVGCSLSDMYARCKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRD 348

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
           SG++P+GIT  GLL AC     +  G+ +   +V  LGL   +     ++ +  R   L 
Sbjct: 349 SGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVK-LGLDGDVSVCNSLLSMYARCSDLS 407

Query: 531 EAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
            A ++   +  + +++ W ++L A   H +P
Sbjct: 408 SAMDVFHEIKDQ-DVVTWNSILTACAQHNHP 437


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 209/593 (35%), Positives = 329/593 (55%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+++Y+KN++ S A+ ++  M   G + + F    ++ AC        G+++H   I
Sbjct: 170 WNGLMSAYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVI 229

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G D D + +NAL+ MYS+ G +  A  +F ++P  DVVSW+  I G    G  + ALE
Sbjct: 230 RTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALE 289

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++ +M+   + P+   + S++   A     +LG+ IH  +V+   D      IA  L+DM
Sbjct: 290 LLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSD--NYIAFGLVDM 347

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G L  AK++F+ + Q  +V W  +ISG     +  E + LF  M +E    +  T+
Sbjct: 348 YAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTL 407

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            +++     +  +   + +HA   + GF     + N L+D Y KC  +  A  +F+   S
Sbjct: 408 AAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGS 467

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D++ + ++I+A +Q    + A +LF+ M    + P+   +  LL+ C    A E GK +
Sbjct: 468 YDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQV 527

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ K+    DV    ALV  YAKCG +  A   FS    + +  W+AM+ G   HG G
Sbjct: 528 HAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHG 587

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           + AL  F  M    + PN IT   +L AC+HAGLV E K  F+ M    G+    EHY C
Sbjct: 588 KRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYAC 647

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           M+DLLGRAG LD+A E++ SMP + N  VWGALLAAS++H++P +G +AA ++  +EP+ 
Sbjct: 648 MIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEK 707

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            G +VL++N YA A  W+DVA VR++MK+ +VKKEP  S VE+   VH FI G
Sbjct: 708 SGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVG 760



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 151/532 (28%), Positives = 258/532 (48%), Gaps = 9/532 (1%)

Query: 29  YTNIINPL-TRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  I +P    ++SLVT+Y  N  P  AL  +  MR      + F +P +LK CA     
Sbjct: 60  FDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAPD--A 116

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMIRG 146
             G ++H  A+  GL GD +V+NAL+ MY   G +  AR +FDE    R+ VSW+ ++  
Sbjct: 117 GFGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSA 176

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           Y +      A++V  EM +  ++P+E     +V+      D++ G+ +HA V+R   D+ 
Sbjct: 177 YVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKD 236

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
             V  A AL+DMYSK G++  A  +F ++ +  VVSW   ISG +        + L  +M
Sbjct: 237 --VFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQM 294

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
               + P+  T+ S++  C   G   LG+ +H ++++   +    +A  LVDMY K   +
Sbjct: 295 KSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLL 354

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             A+ +FD +  +D+++WNA+IS  +      +A  LF  M+      N  T+  +L   
Sbjct: 355 DDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKST 414

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
               A+   + +H   EK G   D  +   L+D Y KC  +N AYR+F +    DI  + 
Sbjct: 415 ASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFT 474

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           +M+        GE+A+  F++M R G+ P+      LLNAC+      +GK V   ++  
Sbjct: 475 SMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIK- 533

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
              +  +     +V    + G +++A      +P +  ++ W A++     H
Sbjct: 534 RQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEK-GVVSWSAMIGGLAQH 584



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 214/430 (49%), Gaps = 12/430 (2%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           TI  +L   A       G  IH   +K+GL   A   N L+  YS+C    SAR +FDE+
Sbjct: 6   TIGPLLTRYAATQSLLQGAHIHAHLLKSGLF--AVFRNHLLSFYSKCRLPGSARRVFDEI 63

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           P+   VSWS+++  Y    +P +AL   R MR   +R +E  +  ++       D   G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKC---APDAGFGT 120

Query: 193 AIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISG 249
            +HA  +       LG  + +A AL+ MY   G +  A+ +F+    + + VSW  ++S 
Sbjct: 121 QLHALAMAT----GLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSA 176

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
           Y++ +  +  V++F EM+   V P+E     ++  C     L+ G+ +HA ++R G++  
Sbjct: 177 YVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKD 236

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           +  ANALVDMY K  +IR A  +F  +   DV+ WNA IS          A EL + MK 
Sbjct: 237 VFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKS 296

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
           S + PN  T+  +L  C  +GA  +G+ +H ++ K   + D  +   LVDMYAK G ++ 
Sbjct: 297 SGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDD 356

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A ++F     RD+ +WNA+++G        EAL  F  M + G   N  T   +L + + 
Sbjct: 357 AKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTAS 416

Query: 490 AGLVTEGKSV 499
              +++ + V
Sbjct: 417 LEAISDTRQV 426



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 163/317 (51%), Gaps = 4/317 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+L++      + + AL+++  MRK G +V+  T+  +LK+ A +      +++H 
Sbjct: 369 LVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHA 428

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A K G   D++V N LI  Y +C  L  A  +F++  + D++++++MI    +    E+
Sbjct: 429 LAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGED 488

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+++  EM    + P    + S+++  A ++  + GK +HA +++  +     V    AL
Sbjct: 489 AIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIK--RQFMSDVFAGNAL 546

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +  Y+KCG++  A   F+ L +  VVSW+ MI G  +       + +F  M++E++ P+ 
Sbjct: 547 VYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRALDVFHRMVDEHISPNH 606

Query: 276 ITILSLIIECGFVGGLQLGK-WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           IT+ S++  C   G +   K + ++     G E +      ++D+ G+  ++  A  L +
Sbjct: 607 ITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDLLGRAGKLDDAMELVN 666

Query: 335 GMK-SKDVMIWNAVISA 350
            M    +  +W A+++A
Sbjct: 667 SMPFQTNAAVWGALLAA 683


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 210/587 (35%), Positives = 323/587 (55%), Gaps = 41/587 (6%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMPNR--DVVSWSTMIRG 146
           K+IH   IK+GL    +  + LI+    S    L  A  LF  + ++  ++  W+T+IR 
Sbjct: 42  KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRA 101

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           +     P  +L +  +M    + P+     S+    A        K +HA  ++      
Sbjct: 102 HSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLAL--H 159

Query: 207 LGVAIATALIDMYSKCGNLAYAK-------------------------------QLFNRL 235
           L   + T+LI MYS+ G L +A+                               +LF+ +
Sbjct: 160 LHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEI 219

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
               VVSW  MI+GY++     E +  F  M E +V P++ T++S++  CG +  L+LGK
Sbjct: 220 PAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGK 279

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
           W+ +++   GF  +L + NALVDMY KC EI +AR LFDGM+ KDV++WN +I  Y    
Sbjct: 280 WIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLS 339

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ----GLEVDV 411
             ++A  LF  M    V PN+VT + +L  C   GAL++GKW+H YI+K     G   +V
Sbjct: 340 LYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNV 399

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
            L T+++ MYAKCG V  A ++F     R +  WNAM++G  M+G  E AL  F +M   
Sbjct: 400 SLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINE 459

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
           G +P+ ITF+G+L+AC+ AG V  G   F  M    G+ PK++HYGCM+DLL R+G  DE
Sbjct: 460 GFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDE 519

Query: 532 AHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAV 591
           A  ++ +M + P+  +WG+LL A ++H     GE  A ++ E+EP+N G  VL+SNIYA 
Sbjct: 520 AKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAG 579

Query: 592 ANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           A RW+DVA +R  + +  +KK PG +S+E++G+VH+F+ G   + +S
Sbjct: 580 AGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQS 626



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 142/457 (31%), Positives = 242/457 (52%), Gaps = 43/457 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+ ++     P+S+L++++ M  +G   ++ T P++ K+CA+   TH  K++H  A+
Sbjct: 95  WNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHAL 154

Query: 99  KNGLDGDAYVSNALIQMYSECGSLV-------------------------------SARY 127
           K  L    +V  +LI MYS+ G L                                 AR 
Sbjct: 155 KLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARR 214

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           LFDE+P +DVVSW+ MI GY + G  EEAL     M+  D+ P++  M+S++S    +  
Sbjct: 215 LFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRS 274

Query: 188 VDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           ++LGK I + V    +D   G  + +  AL+DMYSKCG +  A++LF+ +    V+ W  
Sbjct: 275 LELGKWIGSWV----RDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNT 330

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN- 304
           MI GY   +   E + LF  M+ ENV P+++T L+++  C  +G L LGKW+HAYI +N 
Sbjct: 331 MIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNL 390

Query: 305 ---GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
              G   ++++  +++ MY KC  +  A  +F  M S+ +  WNA+IS  A     ++A 
Sbjct: 391 KGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERAL 450

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDM 420
            LF  M     +P+++T VG+LS CT+AG +E+G ++  +  +  G+   +     ++D+
Sbjct: 451 GLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDL 510

Query: 421 YAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
            A+ G  + A  L     +  D  +W +++    +HG
Sbjct: 511 LARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHG 547


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/580 (35%), Positives = 324/580 (55%), Gaps = 35/580 (6%)

Query: 94  HGFAIKNGLDGDAYVSNALIQM---YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           H   +K GL    Y  + L+++         L  A  +F+     +++ W+TM+RG    
Sbjct: 2   HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV----------- 199
                 LE+   M      P+      ++   A     + G+ IHA V+           
Sbjct: 62  SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121

Query: 200 --------RNCKDE----------KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
                   RN + E          +  V   TALI  Y+  G++  A+++F+ + +  VV
Sbjct: 122 TSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVV 181

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           SW  MI+GY+      E + LF EM+  NV P E T++S++  C   G ++LG+ +H  +
Sbjct: 182 SWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLV 241

Query: 302 L-RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
              +GF  SL + NA + +Y KC ++  A  LF+G+  KDV+ WN +I  Y   +   +A
Sbjct: 242 DDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEA 301

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK--QGLEVDVILKTALV 418
             LF  M  S   PN+VTM+ +L  C   GA+++G+W+H YI+K  +G+     L+T+L+
Sbjct: 302 LLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLI 361

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           DMYAKCGD+  A+++F+  +++ +  WNAM+ G+ MHG    A   F  M ++G++P+ I
Sbjct: 362 DMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDI 421

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           T +GLL+ACSH+GL+  G+ +F  +     + PK+EHYGCM+DLLG AGL  EA E+I  
Sbjct: 422 TLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHM 481

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDV 598
           MP+ P+ ++W +LL A K+H N  + E  A +++EIEP+N G  VL+SNIYA A RW DV
Sbjct: 482 MPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWEDV 541

Query: 599 AGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           A +R V+    +KK PG SS+E++ +VH+FI G  ++ +S
Sbjct: 542 ARIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQS 581



 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 152/503 (30%), Positives = 246/503 (48%), Gaps = 75/503 (14%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++     ++   S L +Y  M   G   + +T P +LK+CA+      G++IH   +
Sbjct: 51  WNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVM 110

Query: 99  KNGLDGDAYVSNALIQMYSE---------------------CGSLV----------SARY 127
           K G + D Y   +LI MY+                      C +L+          SAR 
Sbjct: 111 KLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARK 170

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           +FD +  RDVVSW+ MI GY      EEALE+ +EM   ++RP E  ++S++S  A    
Sbjct: 171 VFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGS 230

Query: 188 VDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSW 243
           ++LG+ IH  V     D+  G    + I  A I +YSKCG++  A  LF  L+   VVSW
Sbjct: 231 IELGREIHTLV-----DDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSW 285

Query: 244 TVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
             +I GY   N   E + LF EM+     P+++T+LS++  C  +G + +G+W+H YI +
Sbjct: 286 NTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDK 345

Query: 304 --NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
              G     A+  +L+DMY KC +I +A  +F+ M  K +  WNA+I  +A     + AF
Sbjct: 346 RLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAF 405

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
           +LF  M+ + + P+++T+VGLLS C+ +G L++G+ +   +  Q   +     T  ++ Y
Sbjct: 406 DLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSV-TQDYNI-----TPKLEHY 459

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
               D+ G   LF EA                      E +I  + ME     P+G+ + 
Sbjct: 460 GCMIDLLGHAGLFKEA----------------------EEIIHMMPME-----PDGVIWC 492

Query: 482 GLLNACSHAGLVTEGKSVFDKMV 504
            LL AC   G +   +S   K++
Sbjct: 493 SLLKACKMHGNLELAESFAQKLM 515



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 64/137 (46%), Gaps = 4/137 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L+ +N+++  +  + + ++A ++++ MRKNG E D+ T+  +L AC+   +  LG+ I  
Sbjct: 385 LSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFK 444

Query: 96  FAIKN-GLDGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMIRGYHRGGLP 153
              ++  +         +I +    G    A  +   MP   D V W ++++     G  
Sbjct: 445 SVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNL 504

Query: 154 EEALEVMREMRFMDIRP 170
           E A    +  + M+I P
Sbjct: 505 ELAESFAQ--KLMEIEP 519


>gi|2828294|emb|CAA16708.1| putatative protein [Arabidopsis thaliana]
 gi|7268714|emb|CAB78921.1| putatative protein [Arabidopsis thaliana]
          Length = 1260

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 213/624 (34%), Positives = 340/624 (54%), Gaps = 8/624 (1%)

Query: 11   EQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVD 70
            EQ R+  + I +  ++ S  + +N    +N  +   +  N P  +L ++  M++ G E +
Sbjct: 601  EQVRKSMSLIHRRLYRISGLSSVNA---WNLQIREAVNRNDPVESLLLFREMKRGGFEPN 657

Query: 71   NFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFD 130
            NFT P + KACA++      + +H   IK+    D +V  A + M+ +C S+  A  +F+
Sbjct: 658  NFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFE 717

Query: 131  EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
             MP RD  +W+ M+ G+ + G  ++A  + REMR  +I P  V +++++   +    + L
Sbjct: 718  RMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKL 777

Query: 191  GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ--NSVVSWTVMIS 248
             +A+HA  +R   D  + V +A   I  Y KCG+L  AK +F  +++   +VVSW  M  
Sbjct: 778  LEAMHAVGIRLGVD--VQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFK 835

Query: 249  GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
             Y    E  +   L+  M+ E   P   T ++L   C     L  G+ +H++ +  G + 
Sbjct: 836  AYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQ 895

Query: 309  SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
             +   N  + MY K  +  SAR LFD M S+  + W  +IS YA+   +D+A  LF  M 
Sbjct: 896  DIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMI 955

Query: 369  VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD-VILKTALVDMYAKCGDV 427
             S  +P+ VT++ L+S C + G+LE GKW+    +  G + D V++  AL+DMY+KCG +
Sbjct: 956  KSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSI 1015

Query: 428  NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
            + A  +F     + +  W  M+AGY ++G   EAL  F  M     KPN ITF+ +L AC
Sbjct: 1016 HEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQAC 1075

Query: 488  SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
            +H+G + +G   F  M     + P ++HY CMVDLLGR G L+EA E+I++M  +P+  +
Sbjct: 1076 AHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGI 1135

Query: 548  WGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
            WGALL A K+H+N  + E AA  +  +EPQ     V M+NIYA A  W+  A +R +MK+
Sbjct: 1136 WGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQ 1195

Query: 608  IRVKKEPGFSSVEVNGLVHKFIRG 631
              +KK PG S ++VNG  H F  G
Sbjct: 1196 RNIKKYPGESVIQVNGKNHSFTVG 1219


>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 733

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/601 (33%), Positives = 333/601 (55%), Gaps = 3/601 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKN-GSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           + +L+  Y+  +    AL +++ M  + G + D F I   LKACA  +    G+ +HGF+
Sbjct: 91  WTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACALGVNICFGELLHGFS 150

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K+GL    +VS+ALI MY + G +     +F++M  R+VVSW+ +I G    G   E L
Sbjct: 151 VKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGL 210

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
               EM    +          +   AD + +  GKAIH   ++   DE     +   L  
Sbjct: 211 LYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDE--SSFVINTLAT 268

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+KCG   Y  +LF ++    VVSWT +IS Y++  E    V  F  M +  V P++ T
Sbjct: 269 MYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYT 328

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             ++I  C  +   + G+ +H ++LR G   +L++AN+++ +Y KC  ++SA  +F G+ 
Sbjct: 329 FAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGIT 388

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KD++ W+ +IS Y+Q     +AF+    M+    +PNE  +  +LS+C     LE GK 
Sbjct: 389 RKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQ 448

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H ++   G++ + ++ +A++ MY+KCG V  A ++F+     DI  W AM+ GY  HG 
Sbjct: 449 VHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGY 508

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            +EA+  F  +   G+KP+ + FIG+L AC+HAG+V  G   F  M +   + P  EHYG
Sbjct: 509 SQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYG 568

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           C++DLL RAG L EA  +I+SMP   + +VW  LL A ++H +   G   A Q+L+++P 
Sbjct: 569 CLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPN 628

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWK 637
           + G ++ ++NIYA   RW + A +R++MK   V KE G+S V VN  ++ F+ G   + +
Sbjct: 629 SAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDQLNAFVAGDQAHPQ 688

Query: 638 S 638
           S
Sbjct: 689 S 689



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 224/460 (48%), Gaps = 21/460 (4%)

Query: 105 DAYVSNALIQMYSEC------GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +AY  + ++++ SE       G L  ARY+FD+M +RD +SW+T+I GY       EAL 
Sbjct: 50  NAYSVHNMLELNSELKQLVKQGQLCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALI 109

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDL--GKAIHACVVRNCKDEKLGVAIATALI 216
           +   M        +  MIS V+L A    V++  G+ +H   V++       V +++ALI
Sbjct: 110 LFSNMWVHPGPQRDQFMIS-VALKACALGVNICFGELLHGFSVKSGLIH--SVFVSSALI 166

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           DMY K G +    ++F ++   +VVSWT +I+G +      EG+  F+EM    V     
Sbjct: 167 DMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSH 226

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T    +        L  GK +H   ++ GF+ S  + N L  MY KC +      LF+ M
Sbjct: 227 TFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKPDYVMRLFEKM 286

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           +  DV+ W  +IS Y Q    + A E F  M+ S V PN+ T   ++S C    A + G+
Sbjct: 287 RMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGE 346

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H ++ + GL   + +  +++ +Y+KCG +  A  +F     +DI  W+ +++ Y   G
Sbjct: 347 QIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGG 406

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH- 515
             +EA  +   M R G KPN      +L+ C    L+ +GK      VH   L   I+H 
Sbjct: 407 YAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQ-----VHAHLLCIGIDHE 461

Query: 516 ---YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
              +  ++ +  + G + EA ++   M +  ++I W A++
Sbjct: 462 AMVHSAIISMYSKCGSVQEASKIFNGMKIN-DIISWTAMI 500


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 213/590 (36%), Positives = 343/590 (58%), Gaps = 3/590 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++SY  + K    L ++  M+  G   +++TI + L AC       LGKEIH   +
Sbjct: 232 WNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVL 291

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+    + YV NALI MY+ CG ++ A  +   M N DVV+W+++I+GY +  + +EAL+
Sbjct: 292 KSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEALQ 351

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
              +M     +P EV++ S+++    ++++  G  +HA V+++  D  L   +   LIDM
Sbjct: 352 FFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNL--LVGNTLIDM 409

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSKC    Y  + F  +++  ++SWT +I+GY   +   E ++LF ++ ++ +   E+ +
Sbjct: 410 YSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMML 469

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  + + K +H +ILR G      + N LVD+YGKCR +  A  +F+ +K 
Sbjct: 470 GSILRACSVLKSMLIVKEIHCHILRKGL-IDTVIQNELVDVYGKCRNMGYASRVFESIKG 528

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KDV+ W ++IS+ A     ++A ELF  M  + +  + V ++ +LS      AL+ G+ +
Sbjct: 529 KDVVSWTSMISSSALNGNENEAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREI 588

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H Y+ ++G  ++  +  A+VDMYA CGD+  A  +F     + +  + +M+  YGMHGCG
Sbjct: 589 HGYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCG 648

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           + ++  F  M    V P+ I+F+ LL ACSHAGL+ EG+     M     L P  EHY C
Sbjct: 649 KASVELFNKMRHENVSPDHISFLALLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVC 708

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VD+LGRA  + EA E +K M   P   VW ALLAA + H    +GEIAA ++LE+EP+N
Sbjct: 709 LVDMLGRANCVVEAFEFVKMMKTEPTTEVWCALLAACRSHSEKEIGEIAAQRLLELEPKN 768

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            G  VL+SN++A   RWNDV  VR  MK   ++K PG S +E++G VHKF
Sbjct: 769 PGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKF 818



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 227/467 (48%), Gaps = 20/467 (4%)

Query: 105 DAYVSNALIQMYSE----CGS--LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           D   +N+ I+ Y+     CG    +S   +FDEM +R   +W+ +I  Y   G P  AL 
Sbjct: 89  DVNGNNSPIEAYAYLLELCGKSRALSQEKVFDEMRDRTAFAWNALIGAYVSNGEPASALF 148

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATA 214
           + R MR   +     +   ++     + D+  G  +H  +V      KLG      I  A
Sbjct: 149 IYRNMRVEGVPLDLYSFPVLLKACGKLRDIRSGTELHCMLV------KLGFNSTGFIVNA 202

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQN-SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           L+ MY+K  +L+ AK+LF+   +    V W  ++S Y    +  E ++LF EM       
Sbjct: 203 LVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPAS 262

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +  TI+S +  C      +LGK +HA +L++   F + + NAL+ MY +C ++  A  + 
Sbjct: 263 NSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGRIL 322

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
             M + DV+ WN++I  Y Q     +A + F  M  +  +P+EV++  +++       L 
Sbjct: 323 RLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLL 382

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            G  LH Y+ K G + ++++   L+DMY+KC       R F     +D+  W  ++AGY 
Sbjct: 383 AGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYA 442

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
           ++ C  EAL  F D+ +  ++ + +    +L ACS    +   K +   ++   GL+  +
Sbjct: 443 LNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHCHILRK-GLIDTV 501

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
                +VD+ G+   +  A  + +S+  + +++ W +++++S L+ N
Sbjct: 502 IQNE-LVDVYGKCRNMGYASRVFESIKGK-DVVSWTSMISSSALNGN 546



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 163/317 (51%), Gaps = 5/317 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + +++  Y  N+    AL ++  + K   E+D   + +IL+AC+ +    + KEIH 
Sbjct: 431 LISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIHC 490

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             ++ GL  D  + N L+ +Y +C ++  A  +F+ +  +DVVSW++MI      G   E
Sbjct: 491 HILRKGLI-DTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNENE 549

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+E+ R M    +    VA++ ++S  A ++ +  G+ IH  ++R  K   L  +IA A+
Sbjct: 550 AVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLR--KGFCLEGSIAVAV 607

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+ CG+L  AK +F+R+ +  ++ +T MI+ Y         V LF +M  ENV P  
Sbjct: 608 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDH 667

Query: 276 ITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           I+ L+L+  C   G L  G ++L    L    E        LVDM G+   +  A     
Sbjct: 668 ISFLALLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFEFVK 727

Query: 335 GMKSKDVM-IWNAVISA 350
            MK++    +W A+++A
Sbjct: 728 MMKTEPTTEVWCALLAA 744


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 218/628 (34%), Positives = 347/628 (55%), Gaps = 14/628 (2%)

Query: 9    NLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSE 68
            N+ + +Q  A+  K    F Y +  + +  +N  ++ +++  +   A++ +  M  +   
Sbjct: 876  NILELKQFKAYATKL---FMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVA 932

Query: 69   VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYL 128
             D  T   +L   A +    LGK+IHG  +++GLD    V N LI MY + GS+  AR +
Sbjct: 933  CDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSV 992

Query: 129  FDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV-AD 187
            F +M   D++SW+TMI G    GL E ++ +   +    + P +  + S++   + +   
Sbjct: 993  FGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGG 1052

Query: 188  VDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSW 243
              L   IHAC +      K GV     ++TALID+YSK G +  A+ LF   +   + SW
Sbjct: 1053 YYLATQIHACAM------KAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASW 1106

Query: 244  TVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
              ++ GYI   +  + +RL+  M E      +IT+++     G + GL+ GK +HA +++
Sbjct: 1107 NAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVK 1166

Query: 304  NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
             GF   L + + ++DMY KC E+ SAR +F  + S D + W  +IS   +    + A   
Sbjct: 1167 RGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFT 1226

Query: 364  FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
            +  M++SKV+P+E T   L+  C+   ALE G+ +H  I K     D  + T+LVDMYAK
Sbjct: 1227 YHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAK 1286

Query: 424  CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
            CG++  A  LF     R I  WNAM+ G   HG  +EAL FF  M+  GV P+ +TFIG+
Sbjct: 1287 CGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGV 1346

Query: 484  LNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP 543
            L+ACSH+GLV+E    F  M    G+ P+IEHY C+VD L RAG ++EA ++I SMP   
Sbjct: 1347 LSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEA 1406

Query: 544  NMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRR 603
            +  ++  LL A ++  +   G+  A ++L +EP +    VL+SN+YA AN+W +VA  R 
Sbjct: 1407 SASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARN 1466

Query: 604  VMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            +M+++ VKK+PGFS V++   VH F+ G
Sbjct: 1467 MMRKVNVKKDPGFSWVDLKNKVHLFVAG 1494



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 135/558 (24%), Positives = 261/558 (46%), Gaps = 43/558 (7%)

Query: 36   LTRYNSLVTSYIKN-NKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
            L  +N+++++   + +K     +++  +R++       T+  + K C         + +H
Sbjct: 724  LVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLH 783

Query: 95   GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
            G+A+K GL  D +V+ AL+ +Y++ G +  AR LFD M  RDVV W+ M++ Y    L  
Sbjct: 784  GYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEY 843

Query: 155  EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
            EA+ +  E      RP +V + ++                    V  CK   L +     
Sbjct: 844  EAMLLFSEFHRTGFRPDDVTLRTLSR------------------VVKCKKNILELKQFK- 884

Query: 215  LIDMYSKCGNLAYAKQLFNRLNQNS-VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
                       AYA +LF   +  S V+ W   +S +++  E  E V  F +MI   V  
Sbjct: 885  -----------AYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRVAC 933

Query: 274  SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              +T + ++     +  L+LGK +H  ++R+G +  +++ N L++MY K   +  AR++F
Sbjct: 934  DGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVF 993

Query: 334  DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
              M   D++ WN +IS    +   + +  +F+H+    + P++ T+  +L  C+   +LE
Sbjct: 994  GQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACS---SLE 1050

Query: 394  MGKWLHTYIE----KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
             G +L T I     K G+ +D  + TAL+D+Y+K G +  A  LF      D+  WNA+M
Sbjct: 1051 GGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIM 1110

Query: 450  AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
             GY + G   +AL  ++ M+ SG + + IT +    A      + +GK +   +V   G 
Sbjct: 1111 HGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVK-RGF 1169

Query: 510  VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA--SKLHKNPSMGEIA 567
               +     ++D+  + G ++ A  +   +P  P+ + W  +++       +  ++    
Sbjct: 1170 NLDLFVTSGVLDMYLKCGEMESARRVFSEIP-SPDDVAWTTMISGCVENGQEEHALFTYH 1228

Query: 568  ATQILEIEPQNYGYNVLM 585
              ++ +++P  Y +  L+
Sbjct: 1229 QMRLSKVQPDEYTFATLV 1246



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 215/470 (45%), Gaps = 52/470 (11%)

Query: 76   TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP-- 133
            +IL+         LGK  H   + +G   D +V+N LI MY++CGSL SAR LFD  P  
Sbjct: 661  SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720

Query: 134  NRDVVSWSTMIRGY-HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
            NRD+V+W+ ++           +   + R +R   +  +   +  +  +    A     +
Sbjct: 721  NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE 780

Query: 193  AIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
            ++H   V      K+G    V +A AL+++Y+K G +  A+ LF+ +    VV W VM+ 
Sbjct: 781  SLHGYAV------KIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMK 834

Query: 249  GYIRCNEINEGVRLFAEMIEENVFPSEITI--LSLIIECGFVGGLQLGKWLHAYILRNGF 306
             Y+      E + LF+E       P ++T+  LS +++C     L+L K   AY  +   
Sbjct: 835  AYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCK-KNILEL-KQFKAYATK--- 889

Query: 307  EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
                      + MY             DG    DV++WN  +S + Q     +A + F+ 
Sbjct: 890  ----------LFMYDD-----------DG---SDVIVWNKALSRFLQRGEAWEAVDCFVD 925

Query: 367  MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
            M  S+V  + +T V +L++      LE+GK +H  + + GL+  V +   L++MY K G 
Sbjct: 926  MINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGS 985

Query: 427  VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
            V+ A  +F +    D+  WN M++G  + G  E ++  FV + R  + P+  T   +L A
Sbjct: 986  VSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRA 1045

Query: 487  CSHAGLVTEGKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDEA 532
            CS      EG       +H      G+V        ++D+  + G ++EA
Sbjct: 1046 CSS----LEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEA 1091



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 112/211 (53%), Gaps = 9/211 (4%)

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK- 337
            S++ +      L LGK  HA IL +G      + N L+ MY KC  + SAR LFD    
Sbjct: 660 FSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPD 719

Query: 338 -SKDVMIWNAVISAYAQAHCIDKA---FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
            ++D++ WNA++SA A AH  DK+   F LF  ++ S V     T+  +  +C  + +  
Sbjct: 720 TNRDLVTWNAILSALA-AHA-DKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPS 777

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
             + LH Y  K GL+ DV +  ALV++YAK G +  A  LF     RD+ +WN MM  Y 
Sbjct: 778 ASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAY- 836

Query: 454 MHGCGE-EALIFFVDMERSGVKPNGITFIGL 483
           +  C E EA++ F +  R+G +P+ +T   L
Sbjct: 837 VDTCLEYEAMLLFSEFHRTGFRPDDVTLRTL 867



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 24/203 (11%)

Query: 2    KIKNGFLNLEQTRQCHAHIIKTHFKFS-----------------------YTNIINP-LT 37
            K   G + L+Q +Q HA ++K  F                          ++ I +P   
Sbjct: 1146 KAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDV 1205

Query: 38   RYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
             + ++++  ++N +   AL  Y  MR +  + D +T  T++KAC+ +     G++IH   
Sbjct: 1206 AWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANI 1265

Query: 98   IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
            +K     D +V  +L+ MY++CG++  AR LF     R + SW+ MI G  + G  +EAL
Sbjct: 1266 VKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEAL 1325

Query: 158  EVMREMRFMDIRPSEVAMISMVS 180
            +  + M+   + P  V  I ++S
Sbjct: 1326 QFFKYMKSRGVMPDRVTFIGVLS 1348



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 5/176 (2%)

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF--SEAIY 439
           +L     A  L +GK  H  I   G   D  +   L+ MYAKCG ++ A +LF  +    
Sbjct: 662 ILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTN 721

Query: 440 RDICMWNAMMAGYGMHG-CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKS 498
           RD+  WNA+++    H     +    F  + RS V     T   +   C  +   +  +S
Sbjct: 722 RDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASES 781

Query: 499 VFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +    V  +GL   +   G +V++  + GL+ EA  +   M +R ++++W  ++ A
Sbjct: 782 LHGYAVK-IGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVR-DVVLWNVMMKA 835


>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 617

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 208/552 (37%), Positives = 324/552 (58%), Gaps = 18/552 (3%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGS--LVSARY---LFDEMPNRDVVSWSTMIR 145
           K+IH   IK     DA ++ +  ++ + C     +  RY   L  ++   ++  ++ +IR
Sbjct: 39  KQIHASIIKTMPSPDAQLTIS-TRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYNAIIR 97

Query: 146 GYHRGGLPE-EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
           G         E L V ++M    I P    +  ++   A+   V  G+ +H   +     
Sbjct: 98  GLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAI----- 152

Query: 205 EKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
            K+G+A    ++  L+ MY+ C  +  A+++F+   Q  +VSWT MI GY++     EGV
Sbjct: 153 -KMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGV 211

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDM 319
            LF EM  EN+    +T++ ++  C  +G L+LG+ LH YI+RN      + + NALVDM
Sbjct: 212 GLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDM 271

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
           Y KC +   AR +F  M  K+V+ WN++IS  AQ     ++  +F  M+   V+P++VT+
Sbjct: 272 YLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTL 331

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
           V +L+ C   G LE+GKW+H Y+++  +  D  +  ALVDMYAKCG ++ A  +F     
Sbjct: 332 VAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNR 391

Query: 440 RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           +D+  + AM+ G  MHG G +AL  F +M + G++P+ +TF+G+L ACSH GLV EG+  
Sbjct: 392 KDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKY 451

Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK 559
           F+ M     L P++EHYGCMVDLLGRAGL++EA E I++MP+ P+  V GALL A K+H 
Sbjct: 452 FEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHG 511

Query: 560 NPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
              +GE    +I +IEP+  G  VLMSNIY+ ANRW D   +R+ MKE  ++K PG SS+
Sbjct: 512 KVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSI 571

Query: 620 EVNGLVHKFIRG 631
           E++G++H+F +G
Sbjct: 572 ELDGVIHEFQKG 583



 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 161/469 (34%), Positives = 246/469 (52%), Gaps = 35/469 (7%)

Query: 36  LTRYNSLVTSYIKNNKPS-SALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           L  YN+++     +N  S   L +Y  M   G   DN+TIP +LKACA+      G+E+H
Sbjct: 89  LPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVH 148

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           G AIK GL  D YVSN L++MY+ C  + SAR +FD  P RD+VSW+TMI+GY + G   
Sbjct: 149 GQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAR 208

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           E + +  EM   +++   + ++ ++S  A + D+ LG+ +H  ++RN  +  L V +  A
Sbjct: 209 EGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRN-SNVNLDVFVGNA 267

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+DMY KCG+  +A+++F  +   +VVSW  MISG  +  +  E + +F +M    V P 
Sbjct: 268 LVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPD 327

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           ++T+++++  C  +G L+LGKW+HAY+ RN       + NALVDMY KC  I  A  +F 
Sbjct: 328 DVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQ 387

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M  KDV  + A+I   A      KA +LF  M    + P+EVT VG+L+ C+  G +E 
Sbjct: 388 AMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEE 447

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G+    Y E                      D++  Y L  +  +     +  M+   G 
Sbjct: 448 GR---KYFE----------------------DMSTIYNLRPQLEH-----YGCMVDLLGR 477

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            G   EA  F  +M    ++P+      LL AC   G V  G+SV  K+
Sbjct: 478 AGLINEAEEFIRNMP---IEPDAFVLGALLGACKIHGKVELGESVMKKI 523



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 177/334 (52%), Gaps = 5/334 (1%)

Query: 20  IIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILK 79
           +I++  K   T+    L  + +++  Y+K       + ++  M     + D  T+  +L 
Sbjct: 175 VIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLS 234

Query: 80  ACAQVLMTHLGKEIHGFAIKNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVV 138
           +CA++    LG+++H + I+N  ++ D +V NAL+ MY +CG    AR +F EMP ++VV
Sbjct: 235 SCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVV 294

Query: 139 SWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACV 198
           SW++MI G  + G  +E+L + R+M+ + ++P +V ++++++  A++  ++LGK +HA +
Sbjct: 295 SWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYL 354

Query: 199 VRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE 258
            RN    +    I  AL+DMY+KCG++  A  +F  +N+  V S+T MI G     +  +
Sbjct: 355 DRN--QIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVYSYTAMIVGLAMHGQGGK 412

Query: 259 GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALV 317
            + LF+EM +  + P E+T + ++  C  VG ++ G K+             L     +V
Sbjct: 413 ALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMV 472

Query: 318 DMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
           D+ G+   I  A      M    D  +  A++ A
Sbjct: 473 DLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGA 506


>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
          Length = 695

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 215/601 (35%), Positives = 326/601 (54%), Gaps = 47/601 (7%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMY-SECGSLVSARY-LFDEMP 133
           +IL  C     T   K++H  +I  G+  +      L   + S  G  VS  Y LF ++P
Sbjct: 39  SILGVCKT---TDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIP 95

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS-LFADVADVDLGK 192
             DVV W+ MI+G+ +     E + +   M    + P       +++ L  D   +  GK
Sbjct: 96  EPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGK 155

Query: 193 AIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
            +H  VV      K G+     +  AL+ MYS CG +  A+ +F+R  +  V SW +MIS
Sbjct: 156 KLHCHVV------KFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMIS 209

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
           GY R  E  E + L  EM    V P+ +T+L ++  C  V    L K +H Y+     E 
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269

Query: 309 SLAMANALVDMYGKCRE-------------------------------IRSARTLFDGMK 337
           SL + NALV+ Y  C E                               ++ ART FD M 
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +D + W  +I  Y +A C +++ E+F  M+ + + P+E TMV +L+ C   G+LE+G+W
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           + TYI+K  ++ DV++  AL+DMY KCG    A ++F +   RD   W AM+ G   +G 
Sbjct: 390 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G+EA+  F  M+   ++P+ IT++G+L+AC+H+G+V + +  F KM     + P + HYG
Sbjct: 450 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 509

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVD+LGRAGL+ EA+E+++ MP+ PN IVWGALL AS+LH +  M E+AA +ILE+EP 
Sbjct: 510 CMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPD 569

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWK 637
           N     L+ NIYA   RW D+  VRR + ++ +KK PGFS +EVNG  H+F+ G   + +
Sbjct: 570 NGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQ 629

Query: 638 S 638
           S
Sbjct: 630 S 630



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 223/451 (49%), Gaps = 36/451 (7%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVL-MTHLGKEIHGFA 97
           +N+++  + K +     + +Y  M K G   D+ T P +L    +       GK++H   
Sbjct: 102 WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHV 161

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K GL  + YV NAL++MYS CG +  AR +FD     DV SW+ MI GY+R    EE++
Sbjct: 162 VKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESI 221

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           E++ EM    + P+ V ++ ++S  + V D DL K +H   V  CK E   + +  AL++
Sbjct: 222 ELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE-YVSECKTEP-SLRLENALVN 279

Query: 218 MYSKC-------------------------------GNLAYAKQLFNRLNQNSVVSWTVM 246
            Y+ C                               GNL  A+  F+++     +SWT+M
Sbjct: 280 AYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIM 339

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           I GY+R    NE + +F EM    + P E T++S++  C  +G L++G+W+  YI +N  
Sbjct: 340 IDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKI 399

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
           +  + + NAL+DMY KC     A+ +F  M  +D   W A++   A      +A ++F  
Sbjct: 400 KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQ 459

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
           M+   ++P+++T +G+LS C  +G ++   K+         +E  ++    +VDM  + G
Sbjct: 460 MQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAG 519

Query: 426 DVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
            V  AY +  +  +  +  +W A++    +H
Sbjct: 520 LVKEAYEILRKMPMNPNSIVWGALLGASRLH 550


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 202/601 (33%), Positives = 354/601 (58%), Gaps = 8/601 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLGKEI 93
           L  +NS++  + +N     + N +  M         D  T+ T+L  CA       G  +
Sbjct: 167 LVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAV 226

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG A+K GL+ +  V+N+LI MYS+C  L  A+ LFD+   +++VSW++MI GY R    
Sbjct: 227 HGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDV 286

Query: 154 EEALEVMREMRFMD--IRPSEVAMISMVSLFADVADVDLGKAIHACVVRN-CKDEKLGVA 210
                ++++M+  D  ++  E  +++++ +  + +++   K +H    R+  +  +L   
Sbjct: 287 CRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNEL--- 343

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           +A A I  Y++CG L  ++++F+ ++  +V SW  ++ GY + ++  + + L+ +M +  
Sbjct: 344 VANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSG 403

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + P   TI SL++ C  +  L  G+ +H + LRNG      +  +L+ +Y  C +  +A+
Sbjct: 404 LDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQ 463

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            LFDGM+ + ++ WN +I+ Y+Q    D+A  LF  M    ++P E+ ++ +   C++  
Sbjct: 464 VLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLS 523

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           AL +GK LH +  K  L  D+ + ++++DMYAK G +  + R+F     +D+  WN ++A
Sbjct: 524 ALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIA 583

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           GYG+HG G+EAL  F  M R G+KP+  TF G+L ACSHAGLV +G   F++M++   + 
Sbjct: 584 GYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIE 643

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           PK+EHY C+VD+LGRAG +D+A  +I+ MP  P+  +W +LL++ ++H N  +GE  A +
Sbjct: 644 PKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANK 703

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIR 630
           +LE+EP+     VL+SN++A + +W+DV  VR  MK+I ++K+ G S +EV G VH F+ 
Sbjct: 704 LLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCSWIEVGGKVHNFLI 763

Query: 631 G 631
           G
Sbjct: 764 G 764



 Score =  271 bits (693), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 165/530 (31%), Positives = 280/530 (52%), Gaps = 13/530 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYA-FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           L ++N++V++Y +N     A++I++  +     + DNFT+P ++KACA +L   LG+ IH
Sbjct: 65  LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 124

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           G A K  L  D +V NALI MY +CG +  A  +F+ MP R++VSW+++I G+   G  +
Sbjct: 125 GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQ 184

Query: 155 EALEVMREMRFMD--IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
           E+    REM   +    P    +++++ + A   D++ G A+H   V+   +E+L   + 
Sbjct: 185 ESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEEL--MVN 242

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN-- 270
            +LIDMYSKC  L+ A+ LF++ ++ ++VSW  MI GY R  ++     L  +M  E+  
Sbjct: 243 NSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAK 302

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           +   E TIL+++  C     LQ  K LH Y  R+G + +  +ANA +  Y +C  + S+ 
Sbjct: 303 MKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSE 362

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +FD M +K V  WNA++  YAQ     KA +L++ M  S + P+  T+  LL  C+   
Sbjct: 363 RVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMK 422

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           +L  G+ +H +  + GL VD  +  +L+ +Y  CG    A  LF    +R +  WN M+A
Sbjct: 423 SLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIA 482

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV--FDKMVHGLG 508
           GY  +G  +EA+  F  M   G++P  I  + +  ACS    +  GK +  F    H   
Sbjct: 483 GYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAH--- 539

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           L   I     ++D+  + G +  +  +   +    ++  W  ++A   +H
Sbjct: 540 LTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR-EKDVASWNVIIAGYGIH 588



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/440 (27%), Positives = 224/440 (50%), Gaps = 13/440 (2%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNA-LIQMYSECGSLVSARYLFDEMPN 134
            +L+AC Q     +G+ +H     +    + +V N  +I MYS CGS   +R +FD++  
Sbjct: 3   VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 62

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKA 193
           +++  W+ ++  Y R  L E+A+ +  E+    + +P    +  ++   A + D+ LG+ 
Sbjct: 63  KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 122

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           IH    +   D    V +  ALI MY KCG +  A ++F  + + ++VSW  +I G+   
Sbjct: 123 IHGMATK--MDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSEN 180

Query: 254 NEINEGVRLFAEMI--EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
             + E    F EM+  EE+  P   T+++++  C     ++ G  +H   ++ G    L 
Sbjct: 181 GFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELM 240

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV-- 369
           + N+L+DMY KCR +  A+ LFD    K+++ WN++I  YA+   + + F L   M+   
Sbjct: 241 VNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTED 300

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
           +K++ +E T++ +L +C E   L+  K LH Y  + GL+ + ++  A +  Y +CG +  
Sbjct: 301 AKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCS 360

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           + R+F     + +  WNA++ GY  +    +AL  ++ M  SG+ P+  T   LL ACS 
Sbjct: 361 SERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSR 420

Query: 490 AGLVTEGKSVFDKMVHGLGL 509
              +  G+      +HG  L
Sbjct: 421 MKSLHYGEE-----IHGFAL 435


>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 215/592 (36%), Positives = 334/592 (56%), Gaps = 9/592 (1%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           +++ Y +N + + A+ +Y  M ++G   D  T  +I+KAC       LG ++HG  IK+G
Sbjct: 152 MISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSG 211

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
            D      NALI MY++ G +  A  +F  +  +D++SW++MI G+ + G   EAL + R
Sbjct: 212 YDHHLIAQNALISMYTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFR 271

Query: 162 EMRFMDI-RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--VAIATALIDM 218
           +M    + +P+E    S+ S    +   + G+ I       C    LG  V    +L DM
Sbjct: 272 DMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGM----CAKFGLGRNVFAGCSLCDM 327

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G L  AK+ F ++    +VSW  +I+     +++NE +  F +MI   + P +IT 
Sbjct: 328 YAKFGFLPSAKRAFYQIESPDLVSWNAIIAALAN-SDVNEAIYFFCQMIHMGLMPDDITF 386

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF-DGMK 337
           L+L+  CG    L  G  +H+YI++ G +   A+ N+L+ MY KC  +  A  +F D  +
Sbjct: 387 LNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISE 446

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           + +++ WNA++SA +Q     +AF LF  M  S+ +P+ +T+  +L  C E  +LE+G  
Sbjct: 447 NGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQ 506

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H +  K GL VDV +   L+DMYAKCG +  A  +F      DI  W++++ GY   G 
Sbjct: 507 VHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGL 566

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G+EAL  F  M   GV+PN +T++G+L+ACSH GLV EG  +++ M   LG+ P  EH  
Sbjct: 567 GQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVS 626

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLL RAG L EA   IK     P++ +W  LLA+ K H N  + E AA  IL+++P 
Sbjct: 627 CMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKLDPS 686

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           N    VL+SNI+A A  W +VA +R +MK++ V+K PG S +EV   +H F 
Sbjct: 687 NSAALVLLSNIHASAGNWKEVARLRNLMKQMGVQKVPGQSWIEVKDQIHVFF 738



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/516 (28%), Positives = 251/516 (48%), Gaps = 8/516 (1%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           NS +    K      AL+ + F  KN S +++  T   ++ AC  V     GK IH   +
Sbjct: 48  NSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHIL 107

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+    D  + N ++ MY +CGSL  AR  FD M  R VVSW+ MI GY + G   +A+ 
Sbjct: 108 KSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAII 167

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M      P ++   S++       D+DLG  +H  V+++  D  L      ALI M
Sbjct: 168 MYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHL--IAQNALISM 225

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF-PSEIT 277
           Y+K G +A+A  +F  ++   ++SW  MI+G+ +     E + LF +M  + V+ P+E  
Sbjct: 226 YTKFGQIAHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFI 285

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             S+   C  +   + G+ +     + G   ++    +L DMY K   + SA+  F  ++
Sbjct: 286 FGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIE 345

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           S D++ WNA+I+A A +  +++A   F  M    + P+++T + LL  C     L  G  
Sbjct: 346 SPDLVSWNAIIAALANSD-VNEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQ 404

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHG 456
           +H+YI K GL+    +  +L+ MY KC +++ A+ +F +     ++  WNA+++    H 
Sbjct: 405 IHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHK 464

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
              EA   F  M  S  KP+ IT   +L  C+    +  G  V    V   GLV  +   
Sbjct: 465 QPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKS-GLVVDVSVS 523

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
             ++D+  + GLL  A  +  S    P+++ W +L+
Sbjct: 524 NRLIDMYAKCGLLKHARYVFDSTQ-NPDIVSWSSLI 558



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 218/438 (49%), Gaps = 10/438 (2%)

Query: 154 EEALEVMR-EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAI 211
            EAL+     ++   I+      ++++    +V  +  GK IH  +++ NC+ +   + +
Sbjct: 61  REALDTFNFHLKNSSIQLEPSTYVNLILACTNVRSLKYGKRIHDHILKSNCQPD---LVL 117

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
              +++MY KCG+L  A++ F+ +   SVVSWT+MISGY +  + N+ + ++ +M+    
Sbjct: 118 QNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGY 177

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
           FP ++T  S+I  C   G + LG  LH +++++G++  L   NAL+ MY K  +I  A  
Sbjct: 178 FPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIAQNALISMYTKFGQIAHASD 237

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV-RPNEVTMVGLLSLCTEAG 390
           +F  + +KD++ W ++I+ + Q     +A  LF  M    V +PNE     + S C    
Sbjct: 238 VFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLL 297

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
             E G+ +     K GL  +V    +L DMYAK G +  A R F +    D+  WNA++A
Sbjct: 298 KPEFGRQIQGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAKRAFYQIESPDLVSWNAIIA 357

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
                    EA+ FF  M   G+ P+ ITF+ LL AC     + +G  +   ++  +GL 
Sbjct: 358 ALANSDV-NEAIYFFCQMIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIK-MGLD 415

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
                   ++ +  +   L +A  + K +    N++ W A+L+A   HK P  GE     
Sbjct: 416 KVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWNAILSACSQHKQP--GEAFRLF 473

Query: 571 ILEIEPQNYGYNVLMSNI 588
            L +  +N   N+ ++ I
Sbjct: 474 KLMLFSENKPDNITITTI 491


>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
          Length = 841

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/603 (33%), Positives = 333/603 (55%), Gaps = 26/603 (4%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           ++  +  +N++++ Y        AL ++  M  +  + D  T+   ++ACA++    LGK
Sbjct: 223 VVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGK 282

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           +IH  AIK     D Y+ NAL+ MYS  GSL S+  LF+ +PNRD   W++MI  Y   G
Sbjct: 283 QIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFG 342

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL-GKAIHACVVRNCKDEKLGVA 210
             EEA+++   M+   ++  E  ++ M+S+  ++A   L GK++HA V+++    ++  +
Sbjct: 343 CHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKS--GMRIDAS 400

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           +  AL+ MY++   +   +++F+R+    ++SW  MI    R     +   LF  M E  
Sbjct: 401 LGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERMRESE 460

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + P+  TI+S++  C  V  L  G+ +H Y++++  E +  +  AL DMY  C +  +AR
Sbjct: 461 IKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDEATAR 520

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            LF+G   +D++ WNA+I                      K  PN VT++ +LS  T   
Sbjct: 521 DLFEGCPDRDLISWNAMIX---------------------KAEPNSVTIINVLSSFTHLA 559

Query: 391 ALEMGKWLHTYIEKQG--LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
            L  G+ LH Y+ ++G  L +D+ L  A + MYA+CG +  A  +F     R+I  WNAM
Sbjct: 560 TLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIISWNAM 619

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +AGYGM+G G +A++ F  M   G +PNG+TF+ +L+ACSH+G +  G  +F  MV    
Sbjct: 620 IAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMVQDFN 679

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
           + P++ HY C+VDLL R G +DEA E I SMP+ P+  VW ALL++ + + +    +   
Sbjct: 680 VTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQAKTIF 739

Query: 569 TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            ++ ++EP N G  VL+SN+YA A  W +V  +R  +KE  ++K PG S + V   VH F
Sbjct: 740 EKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWIIVKNQVHCF 799

Query: 629 IRG 631
             G
Sbjct: 800 SAG 802



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 164/544 (30%), Positives = 273/544 (50%), Gaps = 13/544 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++          + L+ Y  M   G   +N T+P +LKACA       GK IH    
Sbjct: 28  WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 87

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
              L  D  V  A++  Y +CG +  AR +FD M +RDVV W+ M+ GY   G  EEA+ 
Sbjct: 88  GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 147

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++REM   ++RP+   M++++      +++ LG+ +H   +RN   +     +ATALI  
Sbjct: 148 LVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDS-NPHVATALIGF 206

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y +  ++     LF+ +   ++VSW  MISGY    +  + + LF +M+ + V    +T+
Sbjct: 207 YLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTM 265

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           L  +  C  +G L+LGK +H   ++  F   L + NAL++MY     + S+  LF+ + +
Sbjct: 266 LVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPN 325

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE-AGALEMGKW 397
           +D  +WN++ISAYA   C ++A +LFI M+   V+ +E T+V +LS+C E A  L  GK 
Sbjct: 326 RDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKS 385

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH ++ K G+ +D  L  AL+ MY +   V    ++F      DI  WN M+     +  
Sbjct: 386 LHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTL 445

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE--- 514
             +A   F  M  S +KPN  T I +L AC     +  G+S     +HG  +   IE   
Sbjct: 446 RAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRS-----IHGYVMKHSIEINQ 500

Query: 515 -HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
                + D+    G    A ++ +  P R ++I W A++  ++ +    +  +++   L 
Sbjct: 501 PLRTALADMYMNCGDEATARDLFEGCPDR-DLISWNAMIXKAEPNSVTIINVLSSFTHLA 559

Query: 574 IEPQ 577
             PQ
Sbjct: 560 TLPQ 563



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 200/369 (54%), Gaps = 9/369 (2%)

Query: 135 RDVVSWSTMIRGYHRGGLPEEA--LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           +D   W+++I+  H+  L  +   L    +M  + + P+   +  ++   A    V+ GK
Sbjct: 23  KDPKHWNSVIK--HQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGK 80

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
           +IH  +     D    V + TA++D Y KCG +  A+ +F+ ++   VV W  M+ GY+ 
Sbjct: 81  SIHRSI--QGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVG 138

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLA 311
                E + L  EM  EN+ P+  T+++L++ C     L+LG+ +H Y LRNG F+ +  
Sbjct: 139 WGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPH 198

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           +A AL+  Y +  ++R    LFD M  ++++ WNA+IS Y       KA ELF+ M V +
Sbjct: 199 VATALIGFYLRF-DMRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDE 257

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           V+ + VTM+  +  C E G+L++GK +H    K     D+ +  AL++MY+  G +  ++
Sbjct: 258 VKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSH 317

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH-A 490
           +LF     RD  +WN+M++ Y   GC EEA+  F+ M+  GVK +  T + +L+ C   A
Sbjct: 318 QLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELA 377

Query: 491 GLVTEGKSV 499
             + +GKS+
Sbjct: 378 SGLLKGKSL 386


>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15930
 gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 216/601 (35%), Positives = 325/601 (54%), Gaps = 47/601 (7%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMY-SECGSLVSARY-LFDEMP 133
           +IL  C     T   K++H  +I  G+  +      L   + S  G  VS  Y LF ++P
Sbjct: 39  SILGVCKT---TDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIP 95

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRP-SEVAMISMVSLFADVADVDLGK 192
             DVV W+ MI+G+ +     E + +   M    + P S      +  L  D   +  GK
Sbjct: 96  EPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGK 155

Query: 193 AIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
            +H  VV      K G+     +  AL+ MYS CG +  A+ +F+R  +  V SW +MIS
Sbjct: 156 KLHCHVV------KFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMIS 209

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
           GY R  E  E + L  EM    V P+ +T+L ++  C  V    L K +H Y+     E 
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269

Query: 309 SLAMANALVDMYGKCRE-------------------------------IRSARTLFDGMK 337
           SL + NALV+ Y  C E                               ++ ART FD M 
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +D + W  +I  Y +A C +++ E+F  M+ + + P+E TMV +L+ C   G+LE+G+W
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           + TYI+K  ++ DV++  AL+DMY KCG    A ++F +   RD   W AM+ G   +G 
Sbjct: 390 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G+EA+  F  M+   ++P+ IT++G+L+AC+H+G+V + +  F KM     + P + HYG
Sbjct: 450 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 509

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVD+LGRAGL+ EA+E+++ MP+ PN IVWGALL AS+LH +  M E+AA +ILE+EP 
Sbjct: 510 CMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPD 569

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWK 637
           N     L+ NIYA   RW D+  VRR + ++ +KK PGFS +EVNG  H+F+ G   + +
Sbjct: 570 NGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQ 629

Query: 638 S 638
           S
Sbjct: 630 S 630



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 223/451 (49%), Gaps = 36/451 (7%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVL-MTHLGKEIHGFA 97
           +N+++  + K +     + +Y  M K G   D+ T P +L    +       GK++H   
Sbjct: 102 WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHV 161

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K GL  + YV NAL++MYS CG +  AR +FD     DV SW+ MI GY+R    EE++
Sbjct: 162 VKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESI 221

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           E++ EM    + P+ V ++ ++S  + V D DL K +H   V  CK E   + +  AL++
Sbjct: 222 ELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE-YVSECKTEP-SLRLENALVN 279

Query: 218 MYSKC-------------------------------GNLAYAKQLFNRLNQNSVVSWTVM 246
            Y+ C                               GNL  A+  F+++     +SWT+M
Sbjct: 280 AYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIM 339

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           I GY+R    NE + +F EM    + P E T++S++  C  +G L++G+W+  YI +N  
Sbjct: 340 IDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKI 399

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
           +  + + NAL+DMY KC     A+ +F  M  +D   W A++   A      +A ++F  
Sbjct: 400 KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQ 459

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
           M+   ++P+++T +G+LS C  +G ++   K+         +E  ++    +VDM  + G
Sbjct: 460 MQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAG 519

Query: 426 DVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
            V  AY +  +  +  +  +W A++    +H
Sbjct: 520 LVKEAYEILRKMPMNPNSIVWGALLGASRLH 550


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 210/599 (35%), Positives = 340/599 (56%), Gaps = 16/599 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L++ Y +N+     L ++  M+  G++ ++FT    L   A+  +   G ++H   +
Sbjct: 166 WTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 225

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KNGLD    VSN+LI +Y +CG++  AR LFD+   + VV+W++MI GY   GL  EAL 
Sbjct: 226 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 285

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATA 214
           +   MR   +R SE +  S++ L A++ ++   + +H  VV      K G      I TA
Sbjct: 286 MFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVV------KYGFVFDQNIRTA 339

Query: 215 LIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           L+  YSKC  +  A +LF       +VVSWT MISG+++ +   E V LF+EM  + V P
Sbjct: 340 LMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRP 399

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +E T   ++     +   ++    HA +++  +E S  +  AL+D Y K  ++  A  +F
Sbjct: 400 NEFTYSVILTALPVISPSEV----HAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVF 455

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA-L 392
            G+ +KD++ W+A+++ YAQA   + A ++F  +    V+PNE T   +L++C    A +
Sbjct: 456 SGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASM 515

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
             GK  H +  K  L+  + + +AL+ MYAK G +  A  +F     +D+  WN+M++GY
Sbjct: 516 GQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGY 575

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             HG   +AL  F +M++  VK + +TFIG+  AC+HAGLV EG+  FD MV    + P 
Sbjct: 576 AQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPT 635

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
            EH  CMVDL  RAG L++A ++I +MP      +W  +LAA ++HK   +G +AA +I+
Sbjct: 636 KEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKII 695

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            + P++    VL+SN+YA +  W + A VR++M E  VKKEPG+S +EV    + F+ G
Sbjct: 696 AMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAG 754



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 155/525 (29%), Positives = 260/525 (49%), Gaps = 16/525 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           Y SL+  + ++ +   A  ++  ++  G E+D     ++LK  A +     G+++H   I
Sbjct: 65  YTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCI 124

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   D  V  +L+  Y +  +    R +FDEM  R+VV+W+T+I GY R  L EE L 
Sbjct: 125 KFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARNSLNEEVLT 184

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M+    +P+     + + + A+      G  +H  VV+N  D+   + ++ +LI++
Sbjct: 185 LFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT--IPVSNSLINL 242

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCGN+  A+ LF++    SVV+W  MISGY       E + +F  M   +V  SE + 
Sbjct: 243 YLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSF 302

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S+I  C  +  L+  + LH  +++ GF F   +  AL+  Y KC  +  A  LF     
Sbjct: 303 ASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGF 362

Query: 339 -KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
             +V+ W A+IS + Q    ++A  LF  MK   VRPNE T   +L+        E    
Sbjct: 363 LGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALPVISPSE---- 418

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H  + K   E    + TAL+D Y K G V+ A ++FS    +DI  W+AM+AGY   G 
Sbjct: 419 VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQAGE 478

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            E A+  F ++ + GVKPN  TF  +LN C+ A   + G+    K  HG  +  +++   
Sbjct: 479 TEAAIKIFSELTKGGVKPNEFTFSSILNVCA-ATTASMGQG---KQFHGFAIKSRLDSSL 534

Query: 518 C----MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           C    ++ +  + G ++ A E+ K      +++ W ++++    H
Sbjct: 535 CVSSALLTMYAKKGHIESAEEVFKRQR-EKDLVSWNSMISGYAQH 578



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 230/442 (52%), Gaps = 27/442 (6%)

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           L  A  LFD+ P+RD  S+++++ G+ R G  +EA  +   ++ + +        S++ +
Sbjct: 47  LYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKV 106

Query: 182 FADVADVDLGKAIHA-CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
            A + D   G+ +H  C+     D+   V++ T+L+D Y K  N    + +F+ + + +V
Sbjct: 107 SATLCDELFGRQLHCQCIKFGFLDD---VSVGTSLVDTYMKGSNFKDGRNVFDEMKERNV 163

Query: 241 VSWTVMISGYIRCNEINEGV-RLFAEMIEENVFPSEITI---LSLIIECGFVGGLQLGKW 296
           V+WT +ISGY R N +NE V  LF  M +E   P+  T    L ++ E G VGG   G  
Sbjct: 164 VTWTTLISGYAR-NSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEG-VGG--RGLQ 219

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           +H  +++NG + ++ ++N+L+++Y KC  +R AR LFD  + K V+ WN++IS YA    
Sbjct: 220 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 279

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
             +A  +F  M+++ VR +E +   ++ LC     L   + LH  + K G   D  ++TA
Sbjct: 280 DLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTA 339

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           L+  Y+KC  +  A RLF E  +  ++  W AM++G+  +   EEA+  F +M+R GV+P
Sbjct: 340 LMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRP 399

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG----CMVDLLGRAGLLDE 531
           N  T+  +L A            +    VH   +    E        ++D   + G +DE
Sbjct: 400 NEFTYSVILTALP---------VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDE 450

Query: 532 AHEMIKSMPLRPNMIVWGALLA 553
           A ++   +    +++ W A+LA
Sbjct: 451 AAKVFSGID-NKDIVAWSAMLA 471



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 228/436 (52%), Gaps = 13/436 (2%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYA 60
           + + N  +NL    +C  ++ K    F  T + + +T +NS+++ Y  N     AL ++ 
Sbjct: 233 IPVSNSLINL--YLKC-GNVRKARILFDKTEVKSVVT-WNSMISGYAANGLDLEALGMFY 288

Query: 61  FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECG 120
            MR N   +   +  +I+K CA +      +++H   +K G   D  +  AL+  YS+C 
Sbjct: 289 SMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCM 348

Query: 121 SLVSARYLFDEMPNR-DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV 179
           +++ A  LF E     +VVSW+ MI G+ +    EEA+ +  EM+   +RP+E     ++
Sbjct: 349 AMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVIL 408

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
           +    ++  +    +HA VV+   + +    + TAL+D Y K G +  A ++F+ ++   
Sbjct: 409 TALPVISPSE----VHAQVVKT--NYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKD 462

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC-GFVGGLQLGKWLH 298
           +V+W+ M++GY +  E    +++F+E+ +  V P+E T  S++  C      +  GK  H
Sbjct: 463 IVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFH 522

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
            + +++  + SL +++AL+ MY K   I SA  +F   + KD++ WN++IS YAQ     
Sbjct: 523 GFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAM 582

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTAL 417
           KA ++F  MK  KV+ + VT +G+ + CT AG +E G K+    +    +       + +
Sbjct: 583 KALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCM 642

Query: 418 VDMYAKCGDVNGAYRL 433
           VD+Y++ G +  A ++
Sbjct: 643 VDLYSRAGQLEKAMKV 658



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 180/387 (46%), Gaps = 37/387 (9%)

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM------IEENVFPSEITI 278
           L YA  LF++       S+T ++ G+ R     E  RLF  +      ++ ++F S + +
Sbjct: 47  LYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKV 106

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            + + +  F      G+ LH   ++ GF   +++  +LVD Y K    +  R +FD MK 
Sbjct: 107 SATLCDELF------GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKE 160

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           ++V+ W  +IS YA+    ++   LF+ M+    +PN  T    L +  E G    G  +
Sbjct: 161 RNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQV 220

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           HT + K GL+  + +  +L+++Y KCG+V  A  LF +   + +  WN+M++GY  +G  
Sbjct: 221 HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLD 280

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACS-----------HAGLVTEGKSVFDKMVHGL 507
            EAL  F  M  + V+ +  +F  ++  C+           H  +V  G  VFD+ +   
Sbjct: 281 LEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYG-FVFDQNIRTA 339

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA--SKLHKNPSMGE 565
            +V    +  CM  L        +A  + K      N++ W A+++       K  ++G 
Sbjct: 340 LMVA---YSKCMAML--------DALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGL 388

Query: 566 IAATQILEIEPQNYGYNVLMSNIYAVA 592
            +  +   + P  + Y+V+++ +  ++
Sbjct: 389 FSEMKRKGVRPNEFTYSVILTALPVIS 415


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 212/610 (34%), Positives = 346/610 (56%), Gaps = 18/610 (2%)

Query: 33  INPLTRYNSLVTS----------YIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKAC 81
           I+PL   N  VT+          ++K    SSAL+   F+  +     D+F    I  + 
Sbjct: 8   ISPLATKNQKVTTPQIPRCFVLKFVKYLCFSSALHPEHFVNHDHCFNSDSFYASLIDNST 67

Query: 82  AQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWS 141
            +    HL  +IH   + +GL  + ++   L+   S  G +  AR LFDE    DV  W+
Sbjct: 68  HK---RHL-DQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWN 123

Query: 142 TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN 201
            +IR Y R  +  + +E+ R MR+  + P       ++    ++ D  L   IH  +++ 
Sbjct: 124 AIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKY 183

Query: 202 CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVR 261
                  V +   L+ +Y+KCG++  AK +F+ L   ++VSWT +ISGY +  +  E +R
Sbjct: 184 GFGSD--VFVQNGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALR 241

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           +F++M    V P  I ++S++     V  L+ G+ +H ++++ G E   A+  +L   Y 
Sbjct: 242 MFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYA 301

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           KC  +  A++ FD MK+ +V++WNA+IS YA+    ++A  LF +M    ++P+ VT+  
Sbjct: 302 KCGLVTVAKSFFDQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRS 361

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
            +    + G+LE+ +W+  Y+ K     D+ + T+L+DMYAKCG V  A R+F     +D
Sbjct: 362 AVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKD 421

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           + MW+AM+ GYG+HG G EA+  +  M+++GV PN +TFIGLL AC+H+GLV EG  +F 
Sbjct: 422 VVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFH 481

Query: 502 KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
            M     +VP+ EHY C+VDLLGRAG L EA   I  +P+ P + VWGALL+A K+++  
Sbjct: 482 CM-KDFEIVPRNEHYSCVVDLLGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCV 540

Query: 562 SMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
           ++GE AA ++  ++P N G+ V +SN+YA +  W+ VA VR +M+E  + K+ G+S +E+
Sbjct: 541 TLGEYAANKLFSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEI 600

Query: 622 NGLVHKFIRG 631
           NG +  F  G
Sbjct: 601 NGKLQAFHVG 610



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/478 (31%), Positives = 258/478 (53%), Gaps = 18/478 (3%)

Query: 2   KIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAF 61
           K+ NG  NL Q   C+A   K   +F Y ++      +N+++ SY +NN     + +Y +
Sbjct: 93  KLVNGSSNLGQI--CYAR--KLFDEFCYPDVF----MWNAIIRSYSRNNMYRDTVEMYRW 144

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           MR  G   D FT P +LKAC ++L   L   IHG  IK G   D +V N L+ +Y++CG 
Sbjct: 145 MRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGH 204

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           +  A+ +FD + +R +VSW+++I GY + G   EAL +  +MR   ++P  +A++S++  
Sbjct: 205 IGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILRA 264

Query: 182 FADVADVDLGKAIHACVVR-NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
           + DV D++ G++IH  V++   +DE    A+  +L   Y+KCG +  AK  F+++   +V
Sbjct: 265 YTDVDDLEQGRSIHGFVIKMGLEDEP---ALLISLTAFYAKCGLVTVAKSFFDQMKTTNV 321

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           + W  MISGY +     E V LF  MI  N+ P  +T+ S ++    VG L+L +W+  Y
Sbjct: 322 IMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDY 381

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           + ++ +   + +  +L+DMY KC  +  AR +FD    KDV++W+A+I  Y       +A
Sbjct: 382 VSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEA 441

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
             L+  MK + V PN+VT +GLL+ C  +G ++ G  L   ++   +       + +VD+
Sbjct: 442 INLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFEIVPRNEHYSCVVDL 501

Query: 421 YAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHGC---GEEAL--IFFVDMERSG 472
             + G +  A     +  I   + +W A+++   ++ C   GE A   +F +D   +G
Sbjct: 502 LGRAGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTG 559


>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
 gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 201/592 (33%), Positives = 339/592 (57%), Gaps = 14/592 (2%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I  +  + ++++ +++ +   SA + +  MRK G +++N+TI ++L AC + +M     +
Sbjct: 311 IRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQ 370

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN-RDVVSWSTMIRGYHRGG 151
           +H +  K G   D+ VS+ALI MYS+ G +  +  +F EM + +++  W+ MI  + + G
Sbjct: 371 LHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSG 430

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--- 208
               A+E+ + M    +RP +    S++S+   +  + LG+ IH      C   K+G   
Sbjct: 431 STGRAVELFQRMLQEGLRPDKFCSSSVLSI---IDSLSLGRLIH------CYILKIGLFT 481

Query: 209 -VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            +++ ++L  MYSKCG+L  +  +F ++     VSW  MI+G+   +   + V+LF EM+
Sbjct: 482 DISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREML 541

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
            E + P ++T+ + +  C  +  L+ GK +H Y LR      + +  ALV+MY KC  I 
Sbjct: 542 LEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIV 601

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            AR +FD +  KD    ++++S YAQ   I+ A  LF  ++++ +  +  T+  ++    
Sbjct: 602 LARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVA 661

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
              +L++G  LH  + K GL  +V + ++LV MY+KCG ++  +++F +    D+  W A
Sbjct: 662 ILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTA 721

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           M+  Y  HG G EAL  +  M + G KP+ +TF+G+L+ACSH G+V EG S  + M    
Sbjct: 722 MIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEY 781

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
           G+ P   HY CMVDLLGR+G L EA   I +MP+ P+ ++WG LLAA K+H +  +G +A
Sbjct: 782 GIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHGDIELGRLA 841

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           A +++E+EP   G  V +SNI A    W DV  +R +M+   VKKEPG+SSV
Sbjct: 842 AKRVIELEPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTGVKKEPGWSSV 893



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 277/521 (53%), Gaps = 8/521 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++++  +KN +   AL+++  M       ++FT  +IL ACA +     G+ + G+ I
Sbjct: 216 WNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVI 275

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   D +V  A+I +Y++C  +  A   F  MP R+VVSW+T+I G+ +      A  
Sbjct: 276 KCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFH 335

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             +EMR +  + +   + S+++   +   +     +H+ + +      L   +++ALI+M
Sbjct: 336 FFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKT--GFYLDSNVSSALINM 393

Query: 219 YSKCGNLAYAKQLFNRL-NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           YSK G +  ++++F  + +  ++  W VMIS + +       V LF  M++E + P +  
Sbjct: 394 YSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFC 453

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             S++     +  L LG+ +H YIL+ G    +++ ++L  MY KC  +  + T+F+ M 
Sbjct: 454 SSSVL---SIIDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMP 510

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KD + W ++I+ +++    ++A +LF  M + ++RP+++T+   L+ C+   +LE GK 
Sbjct: 511 DKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKE 570

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H Y  +  +  +V++  ALV+MY+KCG +  A R+F     +D    +++++GY  +G 
Sbjct: 571 VHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGY 630

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            E+AL+ F ++  + +  +  T   ++ A +    +  G  +    V  +GL  ++    
Sbjct: 631 IEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQL-HACVTKMGLNAEVSVGS 689

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            +V +  + G +DE H++ + +  +P++I W A++ +   H
Sbjct: 690 SLVTMYSKCGSIDECHKVFEQIE-KPDLISWTAMIVSYAQH 729



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/569 (25%), Positives = 276/569 (48%), Gaps = 40/569 (7%)

Query: 4   KNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPL-------------------------TR 38
           K+G   L  T+  HAH +KT    S T + N L                           
Sbjct: 55  KSGRCTLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVIS 114

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L++   +N     +   +  MR +G + + FT  ++L AC  +     G+ ++  A+
Sbjct: 115 WNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLAL 174

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KNG   + YV   +I ++++  S   A  +F ++   +VV W+ +I G  +      AL+
Sbjct: 175 KNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALD 234

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M      P+     S+++  A + +++ G+ +   V++    E   V + TA+ID+
Sbjct: 235 LFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGED--VFVGTAIIDL 292

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KC ++  A + F R+   +VVSWT +ISG+++ ++       F EM +     +  TI
Sbjct: 293 YAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTI 352

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C     ++    LH++I + GF     +++AL++MY K   +  +  +F  M+S
Sbjct: 353 TSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMES 412

Query: 339 -KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            K++ +W  +ISA+AQ+    +A ELF  M    +RP++     +LS+     +L +G+ 
Sbjct: 413 TKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSI---IDSLSLGRL 469

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H YI K GL  D+ + ++L  MY+KCG +  +Y +F +   +D   W +M+ G+  H  
Sbjct: 470 IHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDH 529

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY- 516
            E+A+  F +M    ++P+ +T    L ACS    + +GK      VHG  L  ++    
Sbjct: 530 AEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKE-----VHGYALRARVGKEV 584

Query: 517 ---GCMVDLLGRAGLLDEAHEMIKSMPLR 542
              G +V++  + G +  A  +   +P +
Sbjct: 585 LVGGALVNMYSKCGAIVLARRVFDMLPQK 613



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/496 (23%), Positives = 238/496 (47%), Gaps = 19/496 (3%)

Query: 91  KEIHGFAIKNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           K +H   +K   L  + +++N+L+  Y +  S+V A  LFD+ P+ +V+SW+ +I G ++
Sbjct: 65  KILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQ 124

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
               E++     +MRF    P++    S++S    +     G+ +++  ++N        
Sbjct: 125 NFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSN--G 182

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            +   +ID+++K  +   A ++F  +   +VV W  +ISG ++  E    + LF +M   
Sbjct: 183 YVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCR 242

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
              P+  T  S++  C  +  L+ G+ +  ++++ G    + +  A++D+Y KCR++  A
Sbjct: 243 FFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQA 302

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
              F  M  ++V+ W  +IS + Q      AF  F  M+    + N  T+  +L+ CTE 
Sbjct: 303 VKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEP 362

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAM 448
             ++    LH++I K G  +D  + +AL++MY+K G V+ + R+F E    +++ MW  M
Sbjct: 363 VMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVM 422

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH--- 505
           ++ +   G    A+  F  M + G++P+          CS + L         +++H   
Sbjct: 423 ISAFAQSGSTGRAVELFQRMLQEGLRPDKF--------CSSSVLSIIDSLSLGRLIHCYI 474

Query: 506 -GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
             +GL   I     +  +  + G L+E++ + + MP + N + W +++     H +    
Sbjct: 475 LKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDN-VSWASMITGFSEHDHAEQA 533

Query: 565 EIAATQIL--EIEPQN 578
                ++L  EI P  
Sbjct: 534 VQLFREMLLEEIRPDQ 549


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 211/605 (34%), Positives = 340/605 (56%), Gaps = 20/605 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y +N   S+ + ++  M   G   D FT  +IL  CA      +G+++H   I
Sbjct: 286 WNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAII 345

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K     + +V+NALI MY++ G+L  A   F+ M  RD +SW+ +I GY +  +   A  
Sbjct: 346 KKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFS 405

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI----ATA 214
           + R M    I P EV++ S++S   ++  ++ G+  H      C   KLG+       ++
Sbjct: 406 LFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFH------CLSVKLGLETNLFAGSS 459

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LIDMYSKCG++  A + ++ + + SVVS   +I+GY   N   E + L  EM    + PS
Sbjct: 460 LIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKN-TKESINLLHEMQILGLKPS 518

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGF----EFSLAMANALVDMYGKCREIRSAR 330
           EIT  SLI  C     + LG  +H  I++ G     EF   +  +L+ MY   + +  A 
Sbjct: 519 EITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSEF---LGTSLLGMYMDSQRLADAN 575

Query: 331 TLFDGMKS-KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
            LF    S K +++W A+IS + Q  C D A  L+  M+ + + P++ T V +L  C   
Sbjct: 576 ILFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALL 635

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAM 448
            +L  G+ +H+ I   G ++D +  +ALVDMYAKCGDV  + ++F E A  +D+  WN+M
Sbjct: 636 SSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSM 695

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           + G+  +G  + AL  F +M +S + P+ +TF+G+L ACSHAG V EG+ +FD MV+  G
Sbjct: 696 IVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYG 755

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
           + P+++HY CMVDLLGR G L EA E I  + + PN ++W  LL A ++H +   G+ AA
Sbjct: 756 IEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAA 815

Query: 569 TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            +++E+EPQ+    VL+SN+YA +  W++   +RR M +  ++K PG S + V    + F
Sbjct: 816 KKLIELEPQSSSPYVLLSNMYAASGNWDEARSLRRTMIKKDIQKIPGCSWIVVGQETNLF 875

Query: 629 IRGGM 633
           + G +
Sbjct: 876 VAGDI 880



 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 162/543 (29%), Positives = 272/543 (50%), Gaps = 45/543 (8%)

Query: 48  KNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAY 107
           K+      L  YA    +G   D FT    L ACA++   HLG+ +H   IK+GL+  ++
Sbjct: 24  KHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSF 83

Query: 108 VSNALIQMYSECGSLVSARYLFDE--MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
              ALI +Y++C SL  AR +F     P+   VSW+ +I GY + GLP EAL +  +MR 
Sbjct: 84  CQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRN 143

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
             + P +VA++++++ +     + LGK   AC                            
Sbjct: 144 SAV-PDQVALVTVLNAY-----ISLGKLDDAC---------------------------- 169

Query: 226 AYAKQLFNRL--NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLII 283
               QLF ++     +VV+W VMISG+ +     E +  F +M +  V  S  T+ S++ 
Sbjct: 170 ----QLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLS 225

Query: 284 ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
               +  L  G  +HA+ ++ GFE S+ +A++L++MYGKC+    AR +FD +  K++++
Sbjct: 226 AIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIV 285

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           WNA++  Y+Q   +    ELF+ M    + P+E T   +LS C     LE+G+ LH+ I 
Sbjct: 286 WNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAII 345

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
           K+    ++ +  AL+DMYAK G +  A + F    YRD   WNA++ GY        A  
Sbjct: 346 KKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFS 405

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL 523
            F  M   G+ P+ ++   +L+AC +  ++  G+  F  +   LGL   +     ++D+ 
Sbjct: 406 LFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQ-FHCLSVKLGLETNLFAGSSLIDMY 464

Query: 524 GRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL-HKNPSMGEIAATQILEIEPQNYGYN 582
            + G + +AH+   SMP R +++   AL+A   L +   S+  +   QIL ++P    + 
Sbjct: 465 SKCGDIKDAHKTYSSMPER-SVVSVNALIAGYALKNTKESINLLHEMQILGLKPSEITFA 523

Query: 583 VLM 585
            L+
Sbjct: 524 SLI 526



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 149/520 (28%), Positives = 262/520 (50%), Gaps = 47/520 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L++ Y++   P  AL+I+  MR N +  D   + T+L                    
Sbjct: 118 WTALISGYVQAGLPHEALHIFDKMR-NSAVPDQVALVTVL-------------------- 156

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN--RDVVSWSTMIRGYHRGGLPEEA 156
                 +AY+S          G L  A  LF +MP   R+VV+W+ MI G+ +    EEA
Sbjct: 157 ------NAYIS---------LGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEA 201

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           L    +M    ++ S   + S++S  A +A ++ G  +HA  ++   +    + +A++LI
Sbjct: 202 LAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFES--SIYVASSLI 259

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           +MY KC     A+Q+F+ ++Q +++ W  M+  Y +   ++  + LF +MI   + P E 
Sbjct: 260 NMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEF 319

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T  S++  C     L++G+ LH+ I++  F  +L + NAL+DMY K   ++ A   F+ M
Sbjct: 320 TYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHM 379

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             +D + WNA+I  Y Q      AF LF  M +  + P+EV++  +LS C     LE G+
Sbjct: 380 TYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQ 439

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
             H    K GLE ++   ++L+DMY+KCGD+  A++ +S    R +   NA++AGY +  
Sbjct: 440 QFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGYALKN 499

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             +E++    +M+  G+KP+ ITF  L++ C  +  V  G  +   +V   GL+   E  
Sbjct: 500 T-KESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKR-GLLCGSEFL 557

Query: 517 GCMVDLLG---RAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           G    LLG    +  L +A+ +        ++++W AL++
Sbjct: 558 G--TSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALIS 595



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 112/210 (53%), Gaps = 2/210 (0%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           FS  + +  +  + +L++ +I+N     ALN+Y  MR N    D  T  T+L+ACA +  
Sbjct: 578 FSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSS 637

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN-RDVVSWSTMIR 145
            H G+EIH      G D D   S+AL+ MY++CG + S+  +F+E+   +DV+SW++MI 
Sbjct: 638 LHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVISWNSMIV 697

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           G+ + G  + AL+V  EM    I P +V  + +++  +    V  G+ I   +V N    
Sbjct: 698 GFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMV-NYYGI 756

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRL 235
           +  V     ++D+  + G L  A++  ++L
Sbjct: 757 EPRVDHYACMVDLLGRWGFLKEAEEFIDKL 786


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/556 (36%), Positives = 316/556 (56%), Gaps = 20/556 (3%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           + +H  A+ +G   D +V++AL ++Y        AR +FD +P+ D V W+T++ G    
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSG- 201

Query: 151 GLPEEALEVMREMRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
               EALE    M     +RP    + S++   A+VA+  +G+ +HA        EK G+
Sbjct: 202 ---SEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAF------GEKCGL 252

Query: 210 A----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           A    + T LI +Y+KCG++  A+ LF+R+    +V++  +ISGY     +   V LF E
Sbjct: 253 AQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKE 312

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           ++   + PS  T+++LI      G   L   LHA++++ G + +  ++ AL  +Y +  +
Sbjct: 313 LVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFND 372

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           + SAR  FD M  K +  WNA+IS YAQ    + A  LF  M+   VRPN +T+   LS 
Sbjct: 373 MDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSA 432

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
           C + GAL +GKW+H  I  + LE++V + TAL+DMY KCG +  A  +F     +++  W
Sbjct: 433 CAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSW 492

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           N M++GYG+HG G EAL  + DM  + + P   TF+ +L ACSH GLV EG +VF  M  
Sbjct: 493 NVMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTS 552

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP---LRPNMIVWGALLAASKLHKNPS 562
             G+ P IEH  CMVDLLGRAG L EA E+I   P   + P   +WGALL A  +HK+  
Sbjct: 553 DYGITPGIEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPG--IWGALLGACMVHKDGD 610

Query: 563 MGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
           + ++A+ ++ E+EP+N GY VL+SN+Y    ++++ A VR+  K  ++ K PG + +E+ 
Sbjct: 611 LAKLASQKLFELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIG 670

Query: 623 GLVHKFIRGGMVNWKS 638
              H F+ G   + +S
Sbjct: 671 DRPHVFMAGDRAHPQS 686



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 215/413 (52%), Gaps = 6/413 (1%)

Query: 53  SSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNA 111
           S AL  +  M   GS   D+ T+ ++L A A+V  T +G+ +H F  K GL    +V   
Sbjct: 202 SEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTG 261

Query: 112 LIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPS 171
           LI +Y++CG +  AR+LFD M   D+V+++ +I GY   G+   ++E+ +E+  M +RPS
Sbjct: 262 LISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLRPS 321

Query: 172 EVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQL 231
              +++++ + +      L   +HA VV+   D      ++TAL  +Y +  ++  A++ 
Sbjct: 322 SSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDAN--APVSTALTTLYCRFNDMDSARRA 379

Query: 232 FNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL 291
           F+ + + ++ SW  MISGY +       V LF +M   NV P+ +TI S +  C  +G L
Sbjct: 380 FDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGAL 439

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
            LGKW+H  I     E ++ +  AL+DMY KC  I  AR +FD M +K+V+ WN +IS Y
Sbjct: 440 SLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGY 499

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL-HTYIEKQGLEVD 410
                  +A +L+  M  + + P   T + +L  C+  G ++ G  +  +     G+   
Sbjct: 500 GLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPG 559

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDI--CMWNAMMAGYGMHGCGEEA 461
           +   T +VD+  + G +  A+ L SE     +   +W A++    +H  G+ A
Sbjct: 560 IEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLA 612



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 1/202 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++++ Y +N     A+ ++  M+      +  TI + L ACAQ+    LGK +H    
Sbjct: 391 WNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKWVHKIIA 450

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
              L+ + YV  ALI MY +CGS+  AR +FD M N++VVSW+ MI GY   G   EAL+
Sbjct: 451 NEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQGAEALK 510

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + ++M    + P+    +S++   +    V  G  +   +  +      G+   T ++D+
Sbjct: 511 LYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITP-GIEHCTCMVDL 569

Query: 219 YSKCGNLAYAKQLFNRLNQNSV 240
             + G L  A +L +   +++V
Sbjct: 570 LGRAGQLKEAFELISEFPKSAV 591


>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Vitis vinifera]
          Length = 773

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 201/592 (33%), Positives = 337/592 (56%), Gaps = 5/592 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+  +++ N   S   I   M   G E +  T   IL+AC  +     G++IHGF I
Sbjct: 147 WTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVI 206

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G D D +V  +LI MYS CG L +A  ++  +  +DV   + MI  Y + G  E+A+ 
Sbjct: 207 KRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIG 266

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIATALID 217
           V   +    + P++    +++S      DV++ + +H  C+   C DE   +++  A++ 
Sbjct: 267 VFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDE---ISVGNAIVS 323

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           +Y K G L  A++ F  + + ++VSWT ++SGY++     + +  F++++E  V      
Sbjct: 324 VYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCC 383

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             +L+  C     L LG  +H ++++ G+   +++  AL+D+Y KCR++RSAR +F  + 
Sbjct: 384 FATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLL 443

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            K+++ +NA++S Y  A   D A  LF  ++++ ++P+ VT   LLSL  +   L  GK 
Sbjct: 444 DKNIVSFNAILSGYIGADEED-AMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKC 502

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH YI K G E +  +  A++ MYAKCG +  A +LF    Y D   WNA+++ Y +HG 
Sbjct: 503 LHAYIIKTGFEANPSVGNAVITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQ 562

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G +ALI F +M++    P+ IT + +L ACS++GL+ EG  +F+ M    G+ P+IEH+ 
Sbjct: 563 GRKALILFEEMKKEEFVPDEITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHFA 622

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLLGRAG L EA   I   P   + ++W  L+   KLH + + G+IA+  +L++ P+
Sbjct: 623 CMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRTLVHVCKLHGDLNFGQIASKHLLDLAPE 682

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
             G  +L+SN+YA     N+ A VR VM +++V KE G S +E++  VH+F+
Sbjct: 683 EAGSYILVSNLYAGGGMLNEAARVRTVMNDLKVSKEAGSSWIEIDNKVHQFV 734



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 240/471 (50%), Gaps = 7/471 (1%)

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           LG+ IH F  K G   DA+  N L+ +Y +   L  A+ +FDEM  R+ ++W+T+I+G+ 
Sbjct: 96  LGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHL 155

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           +    E    + REM ++    +E     ++     + ++  G+ IH  V++   DE   
Sbjct: 156 QVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDED-- 213

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V + T+LI MYS+CG+L  A+++++ L    V     MIS Y +     + + +F  ++ 
Sbjct: 214 VFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLG 273

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
             + P++ T  ++I  C     +++ + LH   ++ G    +++ NA+V +Y K   +  
Sbjct: 274 SGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEE 333

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           A   F GM  ++++ W A++S Y +     KA E F  +    V  +      LL  C+E
Sbjct: 334 AEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSE 393

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
              L +G  +H ++ K G   DV + TAL+D+YAKC  +  A  +F   + ++I  +NA+
Sbjct: 394 CKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAI 453

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GL 507
           ++GY +    E+A+  F  +  + +KP+ +TF  LL+  +    + +GK +   ++  G 
Sbjct: 454 LSGY-IGADEEDAMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGF 512

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
              P + +   ++ +  + G + +A ++  SM    + I W A+++A  LH
Sbjct: 513 EANPSVGN--AVITMYAKCGSIGDACQLFYSMNYL-DSISWNAVISAYALH 560



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 167/315 (53%), Gaps = 5/315 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + +L++ Y+KN     AL  ++ + + G   D+    T+L  C++     LG +IHG
Sbjct: 346 LVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHG 405

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F +K G   D  V  ALI +Y++C  L SAR +F  + ++++VS++ ++ GY  G   E+
Sbjct: 406 FVVKLGYVHDVSVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGY-IGADEED 464

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+ +  ++R  DI+P  V    ++SL AD A +  GK +HA +++   +     ++  A+
Sbjct: 465 AMALFSQLRLADIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEAN--PSVGNAV 522

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I MY+KCG++  A QLF  +N    +SW  +IS Y    +  + + LF EM +E   P E
Sbjct: 523 ITMYAKCGSIGDACQLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDE 582

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYI-LRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           ITILS++  C + G L+ G  L   +  + G +  +     +VD+ G+   +  A +  +
Sbjct: 583 ITILSVLQACSYSGLLEEGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFIN 642

Query: 335 GMK-SKDVMIWNAVI 348
               S   ++W  ++
Sbjct: 643 RSPFSGSPLLWRTLV 657



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 201/406 (49%), Gaps = 13/406 (3%)

Query: 186 ADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
            D+ LG+AIHA +       KLG          L+++Y K   L  A+ +F+ +   + +
Sbjct: 92  GDLMLGQAIHAFLA------KLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTI 145

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           +WT +I G+++ N++    R+  EM       +E T   ++  C  +  L  G+ +H ++
Sbjct: 146 TWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFV 205

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
           ++ GF+  + +  +L+ MY +C ++ +A  ++  +  KDV   N +IS Y +A C +KA 
Sbjct: 206 IKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAI 265

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
            +F+H+  S + PN+ T   ++S C     +E+ + LH    K G   ++ +  A+V +Y
Sbjct: 266 GVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVY 325

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
            K G +  A + F     R++  W A+++GY  +G G++AL  F  +   GV  +   F 
Sbjct: 326 VKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFA 385

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
            LL+ CS    +  G  +   +V  LG V  +     ++DL  +   L  A  +  S+ L
Sbjct: 386 TLLDGCSECKNLGLGLQIHGFVVK-LGYVHDVSVGTALIDLYAKCRKLRSARLVFHSL-L 443

Query: 542 RPNMIVWGALLAAS-KLHKNPSMGEIAATQILEIEPQNYGYNVLMS 586
             N++ + A+L+      +  +M   +  ++ +I+P +  +  L+S
Sbjct: 444 DKNIVSFNAILSGYIGADEEDAMALFSQLRLADIKPDSVTFARLLS 489



 Score = 42.0 bits (97), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 19/71 (26%), Positives = 36/71 (50%)

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           LL +   +G L +G+ +H ++ K G + D      LV++Y K   +  A  +F E + R+
Sbjct: 84  LLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRN 143

Query: 442 ICMWNAMMAGY 452
              W  ++ G+
Sbjct: 144 TITWTTLIKGH 154


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 218/645 (33%), Positives = 338/645 (52%), Gaps = 54/645 (8%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+   +    P     +Y  M+  G   D++T P + KACA +    LG  +H    
Sbjct: 227 WNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVS 286

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR---DVVSWSTMIRGYHRGGLPEE 155
           ++G   + +V NA++ MY +CG+L  A  +FD++ +R   D+VSW++++  Y        
Sbjct: 287 RSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANT 346

Query: 156 ALEVMREMRFMDI-RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           AL +  +M    +  P  +++++++   A +A    G+ +H   +R+   +   V +  A
Sbjct: 347 ALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDD--VFVGNA 404

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV--- 271
           ++DMY+KCG +  A ++F R+    VVSW  M++GY +   +   + LF  M EEN+   
Sbjct: 405 VVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELD 464

Query: 272 --------------------------------FPSEITILSLIIECGFVGGLQLGKWLHA 299
                                            P+ +T++SL+  C  VG L  GK  H 
Sbjct: 465 VVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHC 524

Query: 300 YILRNGFEFS--------LAMANALVDMYGKCREIRSARTLFDGM--KSKDVMIWNAVIS 349
           Y ++              L + N L+DMY KC+    AR +FD +  K +DV+ W  +I 
Sbjct: 525 YAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIG 584

Query: 350 AYAQAHCIDKAFELFIHM-KVSK-VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
            YAQ    + A +LF  M K+ K ++PN+ T+   L  C    AL  G+ +H Y+ +   
Sbjct: 585 GYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFY 644

Query: 408 -EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
             V + +   L+DMY+K GDV+ A  +F     R+   W ++M GYGMHG GE+AL  F 
Sbjct: 645 GSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFD 704

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRA 526
           +M +  + P+GITF+ +L ACSH+G+V  G + F++M    G+ P  EHY CMVDL GRA
Sbjct: 705 EMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRA 764

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMS 586
           G L EA ++I  MP+ P  +VW ALL+A +LH N  +GE AA ++LE+E  N G   L+S
Sbjct: 765 GRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLS 824

Query: 587 NIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           NIYA A RW DVA +R  MK   +KK PG S ++    V  F  G
Sbjct: 825 NIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVG 869



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 201/426 (47%), Gaps = 25/426 (5%)

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF----DEMPNRDVVSWSTM 143
           HLG  IH   IK+ +  + Y  +A++Q  S      + R +F     ++ +R   S S +
Sbjct: 81  HLG--IHQEMIKDRVRTETY-RDAIMQHQSSIAGKPAIRIVFVSVLQQLHHRYRCSISML 137

Query: 144 IRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
           +R +     P ++   + + +F + R    A I + +L  +   +   K +H   +    
Sbjct: 138 LRCF-----PIKS--KLLQSQFTNTRLLSCATIPITAL-KECNSLAHAKLLHQQSIM--- 186

Query: 204 DEKLGVAIATALIDMYSKCGNLAYAKQLFNRL--NQNSVVSWTVMISGYIRCNEINEGVR 261
            + L   +AT LI  Y    + AYA  L  RL  + +SV  W  +I   +      +   
Sbjct: 187 -QGLLFHLATNLIGTYIASNSTAYAILLLERLPPSPSSVFWWNQLIRRALHLGSPRDVFT 245

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           L+ +M      P   T   +   C  +  L LG  LHA + R+GF  ++ + NA+V MYG
Sbjct: 246 LYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYG 305

Query: 322 KCREIRSARTLFDGMKSK---DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV-RPNEV 377
           KC  +R A  +FD +  +   D++ WN+V+SAY  A   + A  LF  M    +  P+ +
Sbjct: 306 KCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVI 365

Query: 378 TMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
           ++V +L  C    A   G+ +H +  + GL  DV +  A+VDMYAKCG +  A ++F   
Sbjct: 366 SLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRM 425

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
            ++D+  WNAM+ GY   G  E AL  F  M    ++ + +T+  ++   +  G   E  
Sbjct: 426 KFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEAL 485

Query: 498 SVFDKM 503
            VF +M
Sbjct: 486 DVFRQM 491



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 177/346 (51%), Gaps = 15/346 (4%)

Query: 19  HIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTIL 78
           H +    + +  NI   +  + +++T Y +  +   AL+++  M   GS  +  T+ ++L
Sbjct: 448 HALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLL 507

Query: 79  KACAQVLMTHLGKEIHGFAIKN--GLDG------DAYVSNALIQMYSECGSLVSARYLFD 130
            AC  V     GKE H +AIK    LDG      D  V N LI MY++C S   AR +FD
Sbjct: 508 SACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFD 567

Query: 131 EMP--NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD--IRPSEVAMISMVSLFADVA 186
            +   +RDVV+W+ MI GY + G    AL++   M  MD  I+P++  +   +   A +A
Sbjct: 568 SVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLA 627

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
            +  G+ +HA V+RN     + + +A  LIDMYSK G++  A+ +F+ + Q + VSWT +
Sbjct: 628 ALRFGRQVHAYVLRNFYGSVM-LFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSL 686

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-G 305
           ++GY       + +R+F EM +  + P  IT L ++  C   G +  G      + ++ G
Sbjct: 687 MTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFG 746

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV-MIWNAVISA 350
            +        +VD++G+   +  A  L + M  +   ++W A++SA
Sbjct: 747 VDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSA 792


>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 220/617 (35%), Positives = 330/617 (53%), Gaps = 85/617 (13%)

Query: 82  AQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR------ 135
           A++LMT    EI             ++ N LI +Y +C  L  AR LFD MP R      
Sbjct: 39  ARILMTQFSMEI-------------FIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWN 85

Query: 136 -------------------------DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRP 170
                                    D  SW++M+ G+ +    EE+LE   +M   D   
Sbjct: 86  SLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLL 145

Query: 171 SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQ 230
           +E +  S +S  A + D+++G  +HA V ++       V + +ALIDMYSKCG++A A++
Sbjct: 146 NEYSFGSALSACAGLMDLNMGTQVHALVSKS--RYSTDVYMGSALIDMYSKCGSVACAEE 203

Query: 231 LFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGG 290
           +F+ + + ++V+W  +I+ Y +    +E + +F  M++  + P E+T+ S++  C  +  
Sbjct: 204 VFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCA 263

Query: 291 LQLGKWLHAYILR-NGFEFSLAMANALVDMYGKCREIRSARTLFD--------------- 334
           L+ G  +HA +++ N F   L + NALVDMY KC ++  AR +FD               
Sbjct: 264 LKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVS 323

Query: 335 ----------------GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
                            M  ++V+ WNA+I+ Y Q    ++A  LF  +K   + P   T
Sbjct: 324 GYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYT 383

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEV------DVILKTALVDMYAKCGDVNGAYR 432
              LLS C     L +G+  HT++ KQG E       D+ +  +L+DMY KCG +    R
Sbjct: 384 FGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSR 443

Query: 433 LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL 492
           +F +   RD   WNA++ GY  +G G EAL  F  M   G KP+ +T IG+L ACSHAGL
Sbjct: 444 VFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGL 503

Query: 493 VTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           V EG+  F  M    GL+P  +HY CMVDLLGRAG L+EA  +I++MP+ P+ +VWG+LL
Sbjct: 504 VEEGRHYFFSMEEH-GLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLL 562

Query: 553 AASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKK 612
           AA K+H N  MG+ AA ++LEI+P N G  VL+SN+YA   RW DV  VR++M++  V K
Sbjct: 563 AACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTK 622

Query: 613 EPGFSSVEVNGLVHKFI 629
           +PG S +EV   VH F+
Sbjct: 623 QPGCSWIEVESRVHVFL 639



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/459 (30%), Positives = 241/459 (52%), Gaps = 45/459 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+V+ + ++++   +L  +  M +    ++ ++  + L ACA ++  ++G ++H    
Sbjct: 115 WNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVS 174

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+    D Y+ +ALI MYS+CGS+  A  +F  M  R++V+W+++I  Y + G   EALE
Sbjct: 175 KSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALE 234

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V   M    + P EV + S+VS  A +  +  G  IHA VV+  K     + +  AL+DM
Sbjct: 235 VFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRD-DLVLGNALVDM 293

Query: 219 YSKCGNLAYAKQLFNRLN-------------------------------QNSVVSWTVMI 247
           Y+KC  +  A+++F+R++                               Q +VVSW  +I
Sbjct: 294 YAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALI 353

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           +GY +  E  E +RLF  +  E+++P+  T  +L+  C  +  L LG+  H ++L+ GFE
Sbjct: 354 AGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFE 413

Query: 308 FS------LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
           F       + + N+L+DMY KC  I     +F+ MK +D + WNA+I  YAQ     +A 
Sbjct: 414 FQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEAL 473

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK---TALV 418
           ++F  M V   +P+ VTM+G+L  C+ AG +E G+     +E+ GL   + LK   T +V
Sbjct: 474 QIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEHGL---IPLKDHYTCMV 530

Query: 419 DMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
           D+  + G +N A  L     +  D  +W +++A   +HG
Sbjct: 531 DLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHG 569



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 174/352 (49%), Gaps = 37/352 (10%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NSL+T Y +N   S AL ++  M  +G E D  T+ +++ ACA +     G +IH 
Sbjct: 213 LVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHA 272

Query: 96  FAIK-NGLDGDAYVSNALIQMYSEC-------------------------------GSLV 123
             +K N    D  + NAL+ MY++C                                S+ 
Sbjct: 273 RVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVK 332

Query: 124 SARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFA 183
           +AR++F +M  R+VVSW+ +I GY + G  EEAL + R ++   I P+     +++S  A
Sbjct: 333 AARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACA 392

Query: 184 DVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
           ++AD+ LG+  H  V++   + + G    + +  +LIDMY KCG++    ++F ++ +  
Sbjct: 393 NLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERD 452

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
            VSW  +I GY +     E +++F +M+     P  +T++ ++  C   G ++ G+    
Sbjct: 453 CVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFF 512

Query: 300 YILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
            +  +G          +VD+ G+   +  A+ L + M  + D ++W ++++A
Sbjct: 513 SMEEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAA 564



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 137/308 (44%), Gaps = 31/308 (10%)

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           ++ +   P+      L+  C      +  + +HA IL   F   + + N L+D+YGKC  
Sbjct: 6   LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65

Query: 326 IRSARTLFDGMKSKDVMIWNAVI-------------------------------SAYAQA 354
           +  AR LFD M  ++   WN++I                               S +AQ 
Sbjct: 66  LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
              +++ E F+ M       NE +    LS C     L MG  +H  + K     DV + 
Sbjct: 126 DRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMG 185

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
           +AL+DMY+KCG V  A  +FS  I R++  WN+++  Y  +G   EAL  FV M  SG++
Sbjct: 186 SALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLE 245

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
           P+ +T   +++AC+    + EG  +  ++V        +     +VD+  +   ++EA  
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305

Query: 535 MIKSMPLR 542
           +   M +R
Sbjct: 306 VFDRMSIR 313


>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 210/548 (38%), Positives = 315/548 (57%), Gaps = 53/548 (9%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGS---LVSARYLFDEMPNRDVVSWSTMIRGYH 148
           +IH   IK  LDG+ +V   L++    C S   L+ AR +FDE+P+ D   W+TMIR Y 
Sbjct: 21  QIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYL 80

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMV-SLFADVADVDLGKAIHACVVRNCKDEKL 207
               P+E++ +  +MR  +  P +   +S+V      + D   G+ +H  V+      K+
Sbjct: 81  NSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVL------KI 134

Query: 208 GVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
           G+     + TALI+MY+K G++  A+ + + +    +V + V+++ Y+R  EIN    LF
Sbjct: 135 GLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINLAHDLF 194

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
             M E +                      L  W                 N ++  +   
Sbjct: 195 DRMPERD----------------------LVSW-----------------NTMIHGHASL 215

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
            ++ +A+ LFD    +D++ W+++I+AYA+A   ++A  LF  M+++ V P++VTMV +L
Sbjct: 216 GDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVL 275

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
           S C + GAL MGK +H  IE+  +E+D+ L T+LVDMYAKCGD++ + R+F+    RD+ 
Sbjct: 276 SACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVF 335

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            W+AM+ G   HG GE AL  F  M    +KPN +TFIG+L+ACSH GLV EG + F  M
Sbjct: 336 AWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSM 395

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
                + PKIEHYGC+VD+LGRAG L EA E+IKSMP  P+ IVW ALL A +++KN  +
Sbjct: 396 SKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEI 455

Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
            E A   +LE+EP   G  VL+SNIY+ A  W+ V  VRR+MK I ++K PG SS+EV+ 
Sbjct: 456 AEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDN 515

Query: 624 LVHKFIRG 631
            VH+F+ G
Sbjct: 516 AVHEFVAG 523



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 188/389 (48%), Gaps = 70/389 (17%)

Query: 29  YTNIINPLTR-YNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLM 86
           +  I +P T  +N+++ +Y+ +  P  +++++  MR      +D++++  +++AC ++  
Sbjct: 61  FDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKD 120

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY------------------- 127
              G+++H   +K GL  D +V  ALI+MY++ G +  AR                    
Sbjct: 121 PGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAE 180

Query: 128 ------------LFDEMPNRDVVSWSTMIRG----------------------------- 146
                       LFD MP RD+VSW+TMI G                             
Sbjct: 181 YVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMI 240

Query: 147 --YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
             Y +     EAL +  EM+  ++ P +V M+S++S   DV  + +GK IH C+ RN   
Sbjct: 241 AAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERN--R 298

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
            ++ + + T+L+DMY+KCG++  + ++FN +N   V +W+ MI G          +  F+
Sbjct: 299 IEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFS 358

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN--ALVDMYGK 322
           +MI E++ P+++T + ++  C  +G +  G W +   +   ++ S  + +   +VD+ G+
Sbjct: 359 KMISEDIKPNDVTFIGVLSACSHIGLVDEG-WTYFTSMSKVYDVSPKIEHYGCVVDILGR 417

Query: 323 CREIRSARTLFDGMK-SKDVMIWNAVISA 350
              ++ A  L   M  + D ++W A++ A
Sbjct: 418 AGRLQEAMELIKSMPFAPDAIVWRALLGA 446


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 204/602 (33%), Positives = 354/602 (58%), Gaps = 8/602 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +++L++ Y  N K   A++ +  M + G   + +    + +AC+      LGK I G
Sbjct: 7   LVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFG 66

Query: 96  FAIKNG-LDGDAYVSNALIQMYSEC-GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           F +K G  + D  V  ALI M+ +  G L SA  +FD MP+R+VV+W+ MI  + + G  
Sbjct: 67  FLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFS 126

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            +A+++  +M      P    +  +VS  A++  + LG+  H  V+++  D  L V +  
Sbjct: 127 RDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLD--LDVCVGC 184

Query: 214 ALIDMYSKC---GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-EGVRLFAEMIEE 269
           +L+DMY+KC   G++  A+++F+R+  ++V+SWT +I+GY++    + E + LF EM++ 
Sbjct: 185 SLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQG 244

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            V P+  T  S++  C  +  + LG+ ++A +++        + N+L+ MY +C  + +A
Sbjct: 245 QVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENA 304

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           R  FD +  K+++ +N +++AYA++   ++AFELF  ++ +    N  T   LLS  +  
Sbjct: 305 RKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSI 364

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           GA+  G+ +H+ I K G + ++ +  AL+ MY++CG++  A+++F+E    ++  W +M+
Sbjct: 365 GAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMI 424

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
            G+  HG    AL  F  M  +GV PN +T+I +L+ACSH GL++EG   F  M    G+
Sbjct: 425 TGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGI 484

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
           VP++EHY C+VDLLGR+G L+EA E++ SMP + + +V    L A ++H N  +G+ AA 
Sbjct: 485 VPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGKHAAE 544

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            ILE +P +    +L+SN++A A +W +VA +R+ MKE  + KE G S +EV   VHKF 
Sbjct: 545 MILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKVHKFY 604

Query: 630 RG 631
            G
Sbjct: 605 VG 606



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 222/459 (48%), Gaps = 10/459 (2%)

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           RD+VSWS +I  Y       EA+    +M      P+E     +    ++  ++ LGK I
Sbjct: 5   RDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKII 64

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKC-GNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
              +++    E   V +  ALIDM+ K  G+L  A ++F+R+   +VV+WT+MI+ + + 
Sbjct: 65  FGFLLKTGYFES-DVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
               + V LF +M+     P   T+  ++  C  +G L LG+  H  ++++G +  + + 
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183

Query: 314 NALVDMYGKC---REIRSARTLFDGMKSKDVMIWNAVISAYAQA-HCIDKAFELFIHMKV 369
            +LVDMY KC     +  AR +FD M   +VM W A+I+ Y Q+  C  +A ELF+ M  
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
            +V+PN  T   +L  C     + +G+ ++  + K  L     +  +L+ MY++CG++  
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMEN 303

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A + F     +++  +N ++  Y      EEA   F ++E +G   N  TF  LL+  S 
Sbjct: 304 ARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASS 363

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
            G + +G+ +  +++   G    +     ++ +  R G ++ A ++   M    N+I W 
Sbjct: 364 IGAIGKGEQIHSRILKS-GFKSNLHICNALISMYSRCGNIEAAFQVFNEMG-DGNVISWT 421

Query: 550 ALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMS 586
           +++     H   +       ++LE  + P    Y  ++S
Sbjct: 422 SMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLS 460



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 148/271 (54%), Gaps = 6/271 (2%)

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
           N+  +VSW+ +IS Y    +  E +  F +M+E   +P+E     +   C     + LGK
Sbjct: 3   NKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGK 62

Query: 296 WLHAYILRNG-FEFSLAMANALVDMYGKCR-EIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
            +  ++L+ G FE  + +  AL+DM+ K   ++ SA  +FD M  ++V+ W  +I+ + Q
Sbjct: 63  IIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQ 122

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
                 A +LF+ M +S   P+  T+ G++S C E G L +G+  H  + K GL++DV +
Sbjct: 123 LGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCV 182

Query: 414 KTALVDMYAKC---GDVNGAYRLFSEAIYRDICMWNAMMAGYGMH-GCGEEALIFFVDME 469
             +LVDMYAKC   G V+ A ++F      ++  W A++ GY    GC  EA+  F++M 
Sbjct: 183 GCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMV 242

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           +  VKPN  TF  +L AC++   +  G+ V+
Sbjct: 243 QGQVKPNHFTFSSVLKACANLSDIWLGEQVY 273


>gi|449476598|ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 709

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 207/597 (34%), Positives = 326/597 (54%), Gaps = 34/597 (5%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLM 86
           + ++ +P L  +N+++  Y+       AL ++  M  +G    D +T P ++KAC+ + M
Sbjct: 140 FDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSM 199

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
            ++G  IHG A+ +G   + +V N+L+ MY  CG +  AR +F+ M  R VVSW+TMI G
Sbjct: 200 LNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISG 259

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           + + G PEEAL V   M    + P    ++S +     + +++LG  +H  V +N   EK
Sbjct: 260 WFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKNHLQEK 319

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
             + +  AL+DMYS+CG +  A  +F    +  V++WT MI+GYI        + L   M
Sbjct: 320 --IEVRNALVDMYSRCGGIDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAM 377

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
             + V P+ +T+ SL+  C                             +L  MY KC  +
Sbjct: 378 QLDGVVPNAVTLASLLSACA----------------------------SLCYMYAKCNAV 409

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             +  +F     K  + WNA++S         +A  LF  M + +V  N  T   ++   
Sbjct: 410 SYSFQVFAKTSKKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAY 469

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI--YRDICM 444
                L+    LH+Y+ + G    + + T L+DMY+KCG ++ A+++F E     +DI +
Sbjct: 470 AILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIV 529

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           W+ ++AGYGMHG GE A++ F  M  SG++PN ITF  +L+ACSH GLV +G ++F  M+
Sbjct: 530 WSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHACSHRGLVDDGLTLFKYMI 589

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
                 P   HY C+VDLLGRAG LDEA+++IKSMP + N  +WGALL A  +H+N  +G
Sbjct: 590 ENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHSIWGALLGACLIHQNVELG 649

Query: 565 EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
           E+AA ++ E+EP++ G  +L++NIYA   RW D   VR +M +I ++K P  SSV V
Sbjct: 650 EVAAERLFELEPESTGNYILLANIYAAVGRWKDAENVRHIMSKIGLRKTPAQSSVGV 706



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 227/476 (47%), Gaps = 42/476 (8%)

Query: 91  KEIHGFAIKNGLDGDA---YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
           K +HG  I +GL       ++ + L   Y+ CG +  AR LFD++ +  +  W+ +I+ Y
Sbjct: 99  KILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNAIIKMY 158

Query: 148 HRGGLPEEALEVMREM----RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
              G   +AL V   M    +F    P +     ++   + ++ +++G  IH   + +  
Sbjct: 159 VDKGFHFDALRVFDSMICSGKFW---PDKYTFPLVIKACSVMSMLNVGVLIHGRALVSGF 215

Query: 204 DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
              + V    +L+ MY  CG +  A+Q+FN + + SVVSW  MISG+ +     E + +F
Sbjct: 216 SSNMFV--QNSLLAMYMNCGKVGLARQVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVF 273

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
             M++  V P   TI+S +  CG++  L+LG  +H  + +N  +  + + NALVDMY +C
Sbjct: 274 NSMMDARVEPDSATIVSALPSCGYLKELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRC 333

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
             I  A  +F   K KDV+ W ++I+ Y        A  L   M++  V PN VT+  LL
Sbjct: 334 GGIDEASLVFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLL 393

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
           S C                             +L  MYAKC  V+ ++++F++   +   
Sbjct: 394 SAC----------------------------ASLCYMYAKCNAVSYSFQVFAKTSKKRTV 425

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            WNA+++G   +    EA+  F  M    V+ N  TF  ++ A +    + +  ++   +
Sbjct: 426 PWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYAILADLKQVMNLHSYL 485

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR-PNMIVWGALLAASKLH 558
           V   G + KI     ++D+  + G LD AH++   +P +  ++IVW  L+A   +H
Sbjct: 486 VRS-GFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVWSVLIAGYGMH 540



 Score = 39.3 bits (90), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 9/124 (7%)

Query: 391 ALEMGKWLHTYIEKQGLEVD---VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
           +L   K LH +    GL      + L + L   YA CG V  A +LF +     + +WNA
Sbjct: 94  SLNKTKILHGHTITSGLLHSPNFIHLPSHLAVSYAFCGCVPLARKLFDDLSDPSLFLWNA 153

Query: 448 MMAGYGMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           ++  Y   G   +AL  F  M  SG   P+  TF  ++ ACS   ++  G      ++HG
Sbjct: 154 IIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTFPLVIKACSVMSMLNVG-----VLIHG 208

Query: 507 LGLV 510
             LV
Sbjct: 209 RALV 212


>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/575 (34%), Positives = 325/575 (56%), Gaps = 10/575 (1%)

Query: 65  NGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVS 124
           +GSE   FT P +LKACA++       ++H   +  G     +V  AL+ +YS+C    S
Sbjct: 25  HGSE---FTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFHS 81

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           AR +FD+MP + +VSW+++I  + R    +++  ++++M+ + +  S          F  
Sbjct: 82  ARLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTG----FLA 137

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
              +  G +IH  + +   D  L + +A +++ MY +   +  A  +F  L+Q S+VSWT
Sbjct: 138 SCSLPQGLSIHGYITKLGLD--LHLPLANSIMSMYIRLNQIDGALSVFYTLHQKSIVSWT 195

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
           +++ GY+   ++ +   +F +M  + V P  I  ++LI  C   G L L   +H+ +L++
Sbjct: 196 IILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLVHSLLLKS 255

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
           GF+    + N LV MY KC+++ SAR +FD +  K V +W ++IS YAQ    ++A  LF
Sbjct: 256 GFDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLF 315

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC 424
             +  +  RPNE+T+  +LS C E G+L MG+ +  YI   GL  D+ ++T+L+ M+ KC
Sbjct: 316 NMLLRTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKC 375

Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS-GVKPNGITFIGL 483
           G +  A  LF     +D+ +W+AM+ GY +HG G+EAL  F  M+   G+KP+ I +  +
Sbjct: 376 GSIKKAQALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSV 435

Query: 484 LNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           L ACSH+GL+ +G   F  M    G+ P I+HY C+VDLLGRAG ++ A   I+ MP+  
Sbjct: 436 LLACSHSGLIEDGLKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYVELALRTIQEMPVLV 495

Query: 544 NMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRR 603
              VW   L+A   H N  +GE AA  + ++EP++ G  VLM+N+Y    +W + A  R 
Sbjct: 496 QARVWAPFLSACYTHHNLELGEFAAKNLFDLEPRSTGNFVLMTNLYTSMGKWKEAAKARS 555

Query: 604 VMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           ++    + KEPG+S +E++G VH     G  + +S
Sbjct: 556 IINARGLVKEPGWSQIEIDGAVHVLAAEGQSHLES 590



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 154/330 (46%), Gaps = 5/330 (1%)

Query: 29  YTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH 88
           YT     +  +  ++  Y+     +    ++  MR      D+     ++  C       
Sbjct: 184 YTLHQKSIVSWTIILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLL 243

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           L   +H   +K+G D    + N L+ MY++C  LVSAR +FD +  + V  W++MI GY 
Sbjct: 244 LAMLVHSLLLKSGFDHKDPIDNLLVAMYAKCKDLVSARRVFDAVHEKSVFLWTSMISGYA 303

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           + G P EAL +   +     RP+E+ + +++S  A++  + +G+ I   ++ N     L 
Sbjct: 304 QFGYPNEALHLFNMLLRTASRPNELTLATVLSACAEMGSLRMGEEIEQYILLNGLGSDLR 363

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V   T+LI M+ KCG++  A+ LF R+    +  W+ MI+GY       E + LF +M  
Sbjct: 364 V--QTSLIHMFCKCGSIKKAQALFERIPNKDLAVWSAMINGYAVHGMGKEALNLFHKMQN 421

Query: 269 E-NVFPSEITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
           E  + P  I   S+++ C   G ++ G K+  +     G E S+   + LVD+ G+   +
Sbjct: 422 EVGIKPDAIVYTSVLLACSHSGLIEDGLKYFRSMQKDFGIEPSIQHYSCLVDLLGRAGYV 481

Query: 327 RSA-RTLFDGMKSKDVMIWNAVISAYAQAH 355
             A RT+ +        +W   +SA    H
Sbjct: 482 ELALRTIQEMPVLVQARVWAPFLSACYTHH 511



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 62/120 (51%)

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
            S V  +E T   +L  C +  +LE    LH++I   G +  V ++TALVD+Y+KC   +
Sbjct: 21  TSGVHGSEFTFPFVLKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYSKCCCFH 80

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A  +F +   + +  WN++++ +      +++      M+  G++ +  TF G L +CS
Sbjct: 81  SARLVFDQMPIKSLVSWNSIISAHCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCS 140


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 200/593 (33%), Positives = 327/593 (55%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L++ + +      AL I+  M+ +G   D  T+ ++L ACA V     GK++H + +
Sbjct: 213 FNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLL 272

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+  D     +L+ +Y +CG + +A  +F+     +VV W+ M+  Y +     ++ E
Sbjct: 273 KAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFE 332

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+   I P++     ++        ++LG+ IH+  ++N  +  + V+    LIDM
Sbjct: 333 IFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVS--GVLIDM 390

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSK G L  A+++   L +  VVSWT MI+GY++ +   E +  F EM +  V+P  I +
Sbjct: 391 YSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGL 450

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S    C  +  ++ G  +HA +  +G+   +++ N LV++Y +C     A +LF  ++ 
Sbjct: 451 ASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEH 510

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN +IS + Q+    +A  +F+ M  +  + N  T +  +S       ++ GK +
Sbjct: 511 KDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQV 570

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    K G   +  +  AL+ +Y KCG +  A  +FSE   R+   WN ++     HG G
Sbjct: 571 HGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRG 630

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F  M++ G+KPN +TFIG+L ACSH GLV EG S F  M +  GL P  +HY C
Sbjct: 631 LEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYAC 690

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VD+LGRAG LD A   +  MP+  N ++W  LL+A K+HKN  +GE+AA  +LE+EP +
Sbjct: 691 VVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHD 750

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VL+SN YAV  +W +   VR++MK+  ++KEPG S +EV   VH F  G
Sbjct: 751 SASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVG 803



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 163/559 (29%), Positives = 284/559 (50%), Gaps = 20/559 (3%)

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC-AQVLMTHLGKEIHGFAIKNG 101
           +  +I  + P   L++ A    +   + +  +   L+AC  +     L  EIH  ++  G
Sbjct: 14  LAKFIVPDNPEKILSLVAAKASHHRALGSADLTCALQACRGRGNRWPLVLEIHATSVVRG 73

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
           L  D  + N LI +Y++ G +  AR +F E+ +RD VSW  M+ GY + GL +EA  +  
Sbjct: 74  LGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYS 133

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALIDMY 219
           +M +  + P+   + S++S          G+ IHA V +   C +  +G     ALI +Y
Sbjct: 134 QMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG----NALIALY 189

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
              G+   A+++F  +     V++  +ISG+ +C      +++F EM    + P  +T+ 
Sbjct: 190 LGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVA 249

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           SL+  C  VG LQ GK LH+Y+L+ G  F      +L+D+Y KC +I +A  +F+     
Sbjct: 250 SLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRT 309

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           +V++WN ++ AY Q   + K+FE+F  M+ + + PN+ T   +L  CT  G +E+G+ +H
Sbjct: 310 NVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIH 369

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
           +   K G E D+ +   L+DMY+K G ++ A ++      RD+  W +M+AGY  H   E
Sbjct: 370 SLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCE 429

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           EAL  F +M+  GV P+ I      +AC+    + +G  +  + V+  G    I  +  +
Sbjct: 430 EALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHAR-VYVSGYAADISIWNTL 488

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA---SKLHKNPSMGEIAATQILEIEP 576
           V+L  R G  +EA  + + +  + + I W  L++    S+L+K   M        +++  
Sbjct: 489 VNLYARCGRSEEAFSLFREIEHK-DEITWNGLISGFGQSRLYKQALM------VFMKMGQ 541

Query: 577 QNYGYNV--LMSNIYAVAN 593
               YNV   +S I A+AN
Sbjct: 542 AGAKYNVFTFISAISALAN 560



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 137/518 (26%), Positives = 267/518 (51%), Gaps = 4/518 (0%)

Query: 41  SLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
           ++++ Y ++     A  +Y+ M         + + ++L AC +  +   G+ IH    K 
Sbjct: 114 AMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQ 173

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
               + +V NALI +Y   GS   A  +F +M   D V+++T+I G+ + G  E AL++ 
Sbjct: 174 AFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIF 233

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
            EM+   +RP  V + S+++  A V D+  GK +H+ +++             +L+D+Y 
Sbjct: 234 DEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLK--AGMSFDYITEGSLLDLYV 291

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           KCG++  A  +FN  ++ +VV W +M+  Y + +++ +   +F +M    + P++ T   
Sbjct: 292 KCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPC 351

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           ++  C   G ++LG+ +H+  ++NGFE  + ++  L+DMY K   +  AR + + ++ +D
Sbjct: 352 ILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRD 411

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           V+ W ++I+ Y Q    ++A   F  M+   V P+ + +    S C    A+  G  +H 
Sbjct: 412 VVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHA 471

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
            +   G   D+ +   LV++YA+CG    A+ LF E  ++D   WN +++G+G     ++
Sbjct: 472 RVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQ 531

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           AL+ F+ M ++G K N  TFI  ++A ++   + +GK V  + V   G   + E    ++
Sbjct: 532 ALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVK-TGHTSETEVANALI 590

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            L G+ G +++A  +   M LR N + W  ++ +   H
Sbjct: 591 SLYGKCGSIEDAKMIFSEMSLR-NEVSWNTIITSCSQH 627



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 229/473 (48%), Gaps = 28/473 (5%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYT-------------------NIINPLTR-----YNSLVT 44
           +L++ +Q H++++K    F Y                    +I N   R     +N ++ 
Sbjct: 260 DLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLV 319

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
           +Y + +  + +  I+  M+  G   + FT P IL+ C       LG++IH  +IKNG + 
Sbjct: 320 AYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFES 379

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           D YVS  LI MYS+ G L  AR + + +  RDVVSW++MI GY +    EEAL   +EM+
Sbjct: 380 DMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQ 439

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
              + P  + + S  S  A +  +  G  IHA V          ++I   L+++Y++CG 
Sbjct: 440 DCGVWPDNIGLASAASACAGIKAMRQGLQIHARVY--VSGYAADISIWNTLVNLYARCGR 497

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
              A  LF  +     ++W  +ISG+ +     + + +F +M +     +  T +S I  
Sbjct: 498 SEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISA 557

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
              +  ++ GK +H   ++ G      +ANAL+ +YGKC  I  A+ +F  M  ++ + W
Sbjct: 558 LANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSW 617

Query: 345 NAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIE 403
           N +I++ +Q     +A +LF  MK   ++PN+VT +G+L+ C+  G +E G  +  +   
Sbjct: 618 NTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSN 677

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
             GL         +VD+  + G ++ A R   E  I  +  +W  +++   +H
Sbjct: 678 VYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVH 730


>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 752

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 205/601 (34%), Positives = 332/601 (55%), Gaps = 3/601 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMR-KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           + +L+  Y+  +    AL +++ M  + G + D F I   LKAC   +    G+ +HGF+
Sbjct: 124 WTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFS 183

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K+GL    +VS+ALI MY + G +     +F +M  R+VVSW+ +I G    G   EAL
Sbjct: 184 VKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEAL 243

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
               EM    +          +   AD + +  GKAIH   ++   DE     +   L  
Sbjct: 244 LYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDE--SSFVINTLAT 301

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+KCG   Y  +LF ++    VVSWT +I+ Y++  E    V  F  M + NV P++ T
Sbjct: 302 MYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYT 361

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             ++I  C  +   + G+ +H ++LR G   +L++AN++V +Y K   ++SA  +F G+ 
Sbjct: 362 FAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGIT 421

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KD++ W+ +I+ Y+Q     +AF+    M+    +PNE  +  +LS+C     LE GK 
Sbjct: 422 RKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQ 481

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H ++   G++ + ++ +AL+ MY+KCG V  A ++F+     +I  W AM+ GY  HG 
Sbjct: 482 VHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGY 541

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            +EA+  F  +   G+KP+ +TFIG+L ACSHAG+V  G   F  M +   + P  EHYG
Sbjct: 542 SQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYG 601

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           C++DLL RAG L EA  MI+SMP   + +VW  LL + ++H +   G   A Q+L ++P 
Sbjct: 602 CIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDPN 661

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWK 637
           + G ++ ++NIYA   RW + A +R++MK   V KE G+S V VN  ++ F+ G   + +
Sbjct: 662 SAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVNVNDKLNAFVAGDQAHPQ 721

Query: 638 S 638
           S
Sbjct: 722 S 722



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 141/515 (27%), Positives = 242/515 (46%), Gaps = 30/515 (5%)

Query: 50  NKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVS 109
           + PSS  ++ A   +N      ++ P     C +++           A +  L  +AY  
Sbjct: 37  HPPSSLHSMTAVFSRNLDSPLTYSSPGTATECRELIQQ---------AKQEQLAQNAYSV 87

Query: 110 NALIQMYSEC------GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
           + ++++ SE       G L  +RY+FD+M +RD +SW+T+I GY       EAL +   M
Sbjct: 88  HNMLELNSELKQLVKQGQLCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNM 147

Query: 164 RFMDIRPSEVAMISMVSLFADVADVDL--GKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
                   +  MIS V+L A    V++  G+ +H   V++       V +++ALIDMY K
Sbjct: 148 WVQPGLQRDQFMIS-VALKACGLGVNICFGELLHGFSVKSGLIN--SVFVSSALIDMYMK 204

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
            G +    ++F ++ + +VVSWT +I+G +      E +  F+EM    V     T    
Sbjct: 205 VGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIA 264

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +        L  GK +H   ++ GF+ S  + N L  MY KC +      LF+ MK  DV
Sbjct: 265 LKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDV 324

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           + W  +I+ Y Q    + A E F  M+ S V PN+ T   ++S C      + G+ +H +
Sbjct: 325 VSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGH 384

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
           + + GL   + +  ++V +Y+K G +  A  +F     +DI  W+ ++A Y   G  +EA
Sbjct: 385 VLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEA 444

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH----YG 517
             +   M R G KPN      +L+ C    L+ +GK      VH   L   I+H    + 
Sbjct: 445 FDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQ-----VHAHVLCIGIDHEAMVHS 499

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
            ++ +  + G ++EA ++   M +  N+I W A++
Sbjct: 500 ALISMYSKCGSVEEASKIFNGMKIN-NIISWTAMI 533


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 214/614 (34%), Positives = 328/614 (53%), Gaps = 7/614 (1%)

Query: 26  KFSYTNIINP-LTRYNSLVTSYIKNNKP--SSALNIYAFMRKNGSEVDNFTIPTILKACA 82
           K  + +I N  +  +N L+  Y +      S  + ++  MR   +  +  T   +  A +
Sbjct: 65  KLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAAS 124

Query: 83  QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
               T  G + H  AIK     D +V ++LI MY + G ++ AR +FD +P R+ VSW+T
Sbjct: 125 SSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWAT 184

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           +I GY    +  EA E+   MR  +    +    S++S       V  GK IH   ++N 
Sbjct: 185 IISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKN- 243

Query: 203 KDEKLGVA-IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVR 261
               L +A +  AL+ MY KCG L  A + F        ++W+ MI+GY +  + +E + 
Sbjct: 244 --GLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALN 301

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           LF  M      PSE T + +I  C  +G L+ GK +H Y L+ G+E  +    ALVDMY 
Sbjct: 302 LFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYA 361

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           KC  +  AR  FD +K  D+++W ++IS YAQ    + A  L+  M++ ++ P+E+TM  
Sbjct: 362 KCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMAS 421

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           +L  C+   ALE GK +H    K G  ++V + +AL  MYAKCG +     +F     RD
Sbjct: 422 VLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRD 481

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           I  WNAM++G   +G G +AL  F ++     KP+ +TF+ +L+ACSH GLV  GK  F 
Sbjct: 482 IMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFR 541

Query: 502 KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
            M+   G+VP++EHY CMVD+L RAG L E  E I+S  +   M +W  LL A + ++N 
Sbjct: 542 MMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNY 601

Query: 562 SMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
            +G  A  +++E+  Q     +L+S+IY    R +DV  VRR+MK   V KEPG S +E+
Sbjct: 602 ELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIEL 661

Query: 622 NGLVHKFIRGGMVN 635
              VH F+ G  ++
Sbjct: 662 KSQVHVFVVGDQIH 675



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 148/501 (29%), Positives = 258/501 (51%), Gaps = 12/501 (2%)

Query: 56  LNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQM 115
           +N+Y    ++ S VD      +L  C +      GK IH   ++ G     Y++N+L+ +
Sbjct: 1   MNLYLLPPQHRSFVD------LLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNL 54

Query: 116 YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA--LEVMREMRFMDIRPSEV 173
           Y++CGS+V A+ +F+ + N+DVVSW+ +I GY + G    +  +E+ + MR  +  P+  
Sbjct: 55  YAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGH 114

Query: 174 AMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFN 233
               + +  +   +   G   HA  ++        V + ++LI+MY K G +  A+++F+
Sbjct: 115 TFSGVFTAASSSPETFGGLQAHALAIKT--SNFYDVFVGSSLINMYCKIGCMLDARKVFD 172

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL 293
            + + + VSW  +ISGY       E   LF  M  E     +    S++        +  
Sbjct: 173 TIPERNTVSWATIISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHY 232

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           GK +H   L+NG     ++ NALV MYGKC  +  A   F+    KD + W+A+I+ YAQ
Sbjct: 233 GKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQ 292

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
           A    +A  LF +M ++  +P+E T VG+++ C++ GALE GK +H Y  K G E  +  
Sbjct: 293 AGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYF 352

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
            TALVDMYAKCG +  A + F      DI +W +M++GY  +G  E AL  +  M+   +
Sbjct: 353 MTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERI 412

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
            P+ +T   +L ACS    + +GK +  + +   G   ++     +  +  + G L++ +
Sbjct: 413 MPHELTMASVLRACSSLAALEQGKQIHAQTIK-YGFSLEVPIGSALSTMYAKCGSLEDGN 471

Query: 534 EMIKSMPLRPNMIVWGALLAA 554
            + + MP R +++ W A+++ 
Sbjct: 472 LVFRRMPSR-DIMTWNAMISG 491


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 199/576 (34%), Positives = 328/576 (56%), Gaps = 6/576 (1%)

Query: 67  SEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG-LDGDAYVSNALIQMYSECGSLVSA 125
           S  D+    T+L++           ++H      G L  + Y++  L   Y+ CG +  A
Sbjct: 18  STFDSLQCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYA 77

Query: 126 RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV 185
           +++FD++  ++   W++MIRGY     P  AL +  +M     +P       ++    D+
Sbjct: 78  QHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDL 137

Query: 186 ADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
              ++G+ +HA VV    +E   V +  +++ MY K G++  A+ +F+R+    + SW  
Sbjct: 138 LLREMGRKVHALVVVGGLEED--VYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNT 195

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
           M+SG+++  E      +F +M  +       T+L+L+  CG V  L++GK +H Y++RNG
Sbjct: 196 MMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNG 255

Query: 306 FEFSLA---MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
               +    + N+++DMY  C  +  AR LF+G++ KDV+ WN++IS Y +     +A E
Sbjct: 256 ESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALE 315

Query: 363 LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYA 422
           LF  M V    P+EVT++ +L+ C +  AL +G  + +Y+ K+G  V+V++ TAL+ MYA
Sbjct: 316 LFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYA 375

Query: 423 KCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
            CG +  A R+F E   +++     M+ G+G+HG G EA+  F +M   GV P+   F  
Sbjct: 376 NCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTA 435

Query: 483 LLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
           +L+ACSH+GLV EGK +F KM     + P+  HY C+VDLLGRAG LDEA+ +I++M L+
Sbjct: 436 VLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLK 495

Query: 543 PNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVR 602
           PN  VW ALL+A +LH+N  +  I+A ++ E+ P      V +SNIYA   RW DV  VR
Sbjct: 496 PNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVR 555

Query: 603 RVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
            ++ + R++K P +S VE+N +VH+F  G   + +S
Sbjct: 556 ALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQS 591



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 227/420 (54%), Gaps = 3/420 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++  Y  NN PS AL +Y  M   G + DNFT P +LKAC  +L+  +G+++H   +
Sbjct: 92  WNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVV 151

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             GL+ D YV N+++ MY + G + +AR +FD M  RD+ SW+TM+ G+ + G    A E
Sbjct: 152 VGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFE 211

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA-IATALID 217
           V  +MR          +++++S   DV D+ +GK IH  VVRN +  ++    +  ++ID
Sbjct: 212 VFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIID 271

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY  C +++ A++LF  L    VVSW  +ISGY +C +  + + LF  M+     P E+T
Sbjct: 272 MYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVT 331

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++S++  C  +  L+LG  + +Y+++ G+  ++ +  AL+ MY  C  +  A  +FD M 
Sbjct: 332 VISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMP 391

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            K++     +++ +       +A  +F  M    V P+E     +LS C+ +G ++ GK 
Sbjct: 392 EKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKE 451

Query: 398 LHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
           +   + +   +E      + LVD+  + G ++ AY +     +  +  +W A+++   +H
Sbjct: 452 IFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSACRLH 511



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 190/355 (53%), Gaps = 16/355 (4%)

Query: 10  LEQTRQCHAHIIKTHFKFSYTN---------IINPLTRYNSLVTSYIKNNKPSSALNIYA 60
           LE+       I+  +FKF             ++  LT +N++++ ++KN +   A  ++ 
Sbjct: 155 LEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFG 214

Query: 61  FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG---DAYVSNALIQMYS 117
            MR++G   D  T+  +L AC  V+   +GKEIHG+ ++NG  G   + ++ N++I MY 
Sbjct: 215 DMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYC 274

Query: 118 ECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMIS 177
            C S+  AR LF+ +  +DVVSW+++I GY + G   +ALE+   M  +   P EV +IS
Sbjct: 275 NCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVIS 334

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
           +++    ++ + LG  + + VV+  +   + V + TALI MY+ CG+L  A ++F+ + +
Sbjct: 335 VLAACNQISALRLGATVQSYVVK--RGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPE 392

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
            ++ + TVM++G+       E + +F EM+ + V P E    +++  C   G +  GK +
Sbjct: 393 KNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEI 452

Query: 298 HAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISA 350
              + R+   E      + LVD+ G+   +  A  + + MK K +  +W A++SA
Sbjct: 453 FYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSA 507



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 118/251 (47%), Gaps = 5/251 (1%)

Query: 2   KIKNGFL-NLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYA 60
           ++ NGFL N      C+   +    K      +  +  +NSL++ Y K      AL ++ 
Sbjct: 259 RVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFG 318

Query: 61  FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECG 120
            M   G+  D  T+ ++L AC Q+    LG  +  + +K G   +  V  ALI MY+ CG
Sbjct: 319 RMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCG 378

Query: 121 SLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
           SLV A  +FDEMP +++ + + M+ G+   G   EA+ +  EM    + P E    +++S
Sbjct: 379 SLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLS 438

Query: 181 LFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL--AYAKQLFNRLNQN 238
             +    VD GK I   + R+   E       + L+D+  + G L  AYA     +L  N
Sbjct: 439 ACSHSGLVDEGKEIFYKMTRDYSVEPRPTHY-SCLVDLLGRAGYLDEAYAVIENMKLKPN 497

Query: 239 SVVSWTVMISG 249
             V WT ++S 
Sbjct: 498 EDV-WTALLSA 507


>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 690

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 210/617 (34%), Positives = 346/617 (56%), Gaps = 9/617 (1%)

Query: 15  QCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFT 73
            C A ++     F   +I + +  +NSLV+ Y KN+     L ++  +      V D+FT
Sbjct: 54  HCSARLV-----FENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFT 108

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
            P ++KA   +    LG+ IH   +K+G   D  V+++L+ MY++      +  +FDEMP
Sbjct: 109 YPNVIKAYGALGREFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMP 168

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
            RDV SW+T+I  +++ G  E+ALE+   M   D  P+ V++   +S  + +  ++ GK 
Sbjct: 169 ERDVASWNTVISSFYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKE 228

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           IH   ++  K+ +L   + +AL+DMY +C  L  A+++F ++ + S+V+W  MI GY+  
Sbjct: 229 IHRKYLK--KEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIRGYVAR 286

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
            +    V L   MI E   PS+ T+ S+++ C     L  GK++H Y++R+  +  + + 
Sbjct: 287 GDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFVHGYVIRSVVDADIYIN 346

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
            +L+D+Y KC E++ A T+F   +   V  WN +IS Y       KA +++  M    V+
Sbjct: 347 CSLIDLYFKCGEVKLAETVFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQ 406

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           P+ VT   +LS C++  ALE GK +H  I +  LE D +L +AL+DMY+KCG+V  A R+
Sbjct: 407 PDIVTFTSVLSTCSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRI 466

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F+    +D+  W  M++ YG HG   EAL  F +M++ GVKP+G+TF+ +L+AC HAGL+
Sbjct: 467 FNSIPKKDVVSWTVMISAYGSHGQPREALYHFDEMQKFGVKPDGVTFLAVLSACGHAGLI 526

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP-LRPNMIVWGALL 552
            EG   F +M    G+   IE Y C++D+LGRAG L EA+ +++  P  R N  +   L 
Sbjct: 527 DEGVKYFSQMRSKYGIEASIEQYSCLIDILGRAGRLLEAYGILQQKPETRDNAELLSTLF 586

Query: 553 AASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKK 612
            A  LH++  +G   A  ++E  P +     ++ N+YA    W+    VR  MKE+ ++K
Sbjct: 587 CACCLHRDHLLGYTIAKLLVEKYPDDASTYTVLFNLYASGESWDAAKRVRLKMKEVGMRK 646

Query: 613 EPGFSSVEVNGLVHKFI 629
           +PG S +E+N  V  F 
Sbjct: 647 KPGCSWIEMNEKVCHFF 663



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 143/279 (51%), Gaps = 8/279 (2%)

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           +LSL+ EC     L+  K +H  IL  G    + +  +L+++Y  C++  SAR +F+ + 
Sbjct: 6   LLSLLRECTNTKSLRQAKLVHQRILTVGLRSDVVLCKSLINVYFACKDHCSARLVFENID 65

Query: 338 SK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV-RPNEVTMVGLLSLCTEAGALEMG 395
            + DV IWN+++S Y++        ++F  +    +  P+  T   ++      G   +G
Sbjct: 66  IRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGALGREFLG 125

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +HT + K G   DV++ ++LV MYAK      + ++F E   RD+  WN +++ +   
Sbjct: 126 RMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVISSFYQR 185

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  E+AL  F  MERS  +PN ++    ++ACS    +  GK +  K    L    +++ 
Sbjct: 186 GDAEKALELFGRMERSDFEPNSVSITVAISACSRLLCLERGKEIHRKY---LKKEFELDE 242

Query: 516 Y--GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           Y    +VD+ GR   L+ A E+ + M  R +++ W +++
Sbjct: 243 YVNSALVDMYGRCDFLEMAREVFQQMR-RKSLVAWNSMI 280


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 202/578 (34%), Positives = 321/578 (55%), Gaps = 39/578 (6%)

Query: 86  MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECG---SLVSARYLFDEMPNRDVVSWST 142
           +THL K++H   +++ LD    +   L+   S C    SL  A  +F+ +P  +    + 
Sbjct: 36  LTHL-KQVHAQILRSKLDRSTSLLVKLV--ISSCALSSSLDYALSVFNLIPKPETHLCNR 92

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
            +R   R   PE+ L V   MR   +     +   ++   + V  +  G  IH    +  
Sbjct: 93  FLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLG 152

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
            D    V   T L+ MY+ CG +A A+ +F+++    VV+W++MI GY +    N+ + L
Sbjct: 153 FDSDPFVQ--TGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLL 210

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F EM   NV P E+ + +++  CG  G L  GK +H +I+ N       + +ALV MY  
Sbjct: 211 FEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYAS 270

Query: 323 CR-------------------------------EIRSARTLFDGMKSKDVMIWNAVISAY 351
           C                                +I +AR++F+ M  KD++ W+A+IS Y
Sbjct: 271 CGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGY 330

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
           A++    +A  LF  M+   ++P++VTM+ +++ C   GAL+  KW+H +++K G    +
Sbjct: 331 AESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGAL 390

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
            +  AL++MYAKCG +  A R+F +   +++  W  M++ + MHG    AL FF  ME  
Sbjct: 391 PINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDE 450

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
            ++PNGITF+G+L ACSHAGLV EG+ +F  M++   + PK  HYGCMVDL GRA LL E
Sbjct: 451 NIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLRE 510

Query: 532 AHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAV 591
           A E++++MPL PN+I+WG+L+AA ++H    +GE AA ++LE++P + G +V +SNIYA 
Sbjct: 511 ALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSNIYAK 570

Query: 592 ANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           A RW DV  VR++MK   + KE G S  E+N  +H+F+
Sbjct: 571 ARRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFL 608



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 240/465 (51%), Gaps = 33/465 (7%)

Query: 25  FKFSYTNII-NPLTRY-NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACA 82
           +  S  N+I  P T   N  +    ++ +P   L +Y  MR  G  VD F+ P +LKA +
Sbjct: 74  YALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALS 133

Query: 83  QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
           +V     G EIHG A K G D D +V   L++MY+ CG +  AR +FD+M +RDVV+WS 
Sbjct: 134 RVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSI 193

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN- 201
           MI GY + GL  +AL +  EM+  ++ P E+ + +++S      ++  GK IH  ++ N 
Sbjct: 194 MIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENN 253

Query: 202 -----------------CKDEKLGVAI-----------ATALIDMYSKCGNLAYAKQLFN 233
                            C    L + +           +TA++  YSK G +  A+ +FN
Sbjct: 254 IVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFN 313

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL 293
           ++ +  +V W+ MISGY   +   E + LF EM    + P ++T+LS+I  C  +G L  
Sbjct: 314 QMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQ 373

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
            KW+H ++ +NGF  +L + NAL++MY KC  +  AR +FD M  K+V+ W  +ISA+A 
Sbjct: 374 AKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAM 433

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVI 412
                 A   F  M+   + PN +T VG+L  C+ AG +E G K  ++ I +  +    +
Sbjct: 434 HGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHV 493

Query: 413 LKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
               +VD++ +   +  A  L     +  ++ +W ++MA   +HG
Sbjct: 494 HYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHG 538


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 212/593 (35%), Positives = 326/593 (54%), Gaps = 7/593 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L++ Y K       + ++  M   G   D +TI  +LK  A +     G+ +HG   
Sbjct: 164 WTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGEVVHGLLE 223

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G      V NAL+  Y++      A  +FD MP+RDV+SW++MI G    GL ++A+E
Sbjct: 224 KLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNGLYDKAIE 283

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M           ++S++   A++  + LG+ +H   V+     +   ++A  L+DM
Sbjct: 284 LFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQ--TSLANVLLDM 341

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YS C +     ++F  + Q +VVSWT MI+ Y R    ++   LF EM  E   P    I
Sbjct: 342 YSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRPDIFAI 401

Query: 279 LSLIIECGFVGG--LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
            S +    F G   L+ GK +H Y +RNG E  LA+ NAL++MY KC  +  A+ +FDG+
Sbjct: 402 TSALH--AFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIFDGV 459

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
            SKD++ WN +I  Y++ +  ++AF LF  M + ++RPN VTM  +L       +LE G+
Sbjct: 460 VSKDMISWNTLIGGYSRNNLANEAFSLFTEMLL-QLRPNAVTMTCILPAAASLSSLERGR 518

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H Y  ++G   D  +  AL+DMY KCG +  A RLF     +++  W  M+AGYGMHG
Sbjct: 519 EMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTIMVAGYGMHG 578

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
            G +A+  F  M  SG+ P+  +F  +L ACSH+GL  EG   FD M     + P+++HY
Sbjct: 579 RGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEHKIEPRLKHY 638

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            CMVDLL   G L EA+E I SMP+ P+  +W +LL   ++H+N  + E  A ++ E+EP
Sbjct: 639 TCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEVAERVFELEP 698

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +N GY VL++NIYA A RW  V  ++  +    +++  G S +E  G VH FI
Sbjct: 699 ENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKVHVFI 751



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 240/499 (48%), Gaps = 19/499 (3%)

Query: 69  VDNFTIPTILKACAQVLMTHLGKEIHGFAIKN---GLDG-DAYVSNALIQMYSECGSLVS 124
           VD+ +   +L+ C++V     GK  H F ++    G DG D  +   L+ MY +CG L +
Sbjct: 89  VDDRSYGAVLQLCSEVRSLEGGKRAH-FLVRASSLGRDGMDNVLGQKLVLMYLKCGDLEN 147

Query: 125 ARYLFDEMPN-RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFA 183
           AR +FDEMP   DV  W+ ++ GY + G   E + + R+M    +RP    +  ++   A
Sbjct: 148 ARRVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIA 207

Query: 184 DVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
            +  ++ G+ +H  +      EKLG     A+  AL+  Y+K      A  +F+ +    
Sbjct: 208 GLGSIEDGEVVHGLL------EKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRD 261

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
           V+SW  MISG       ++ + LF  M  E       T+LS++  C  +  L LG+ +H 
Sbjct: 262 VISWNSMISGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHG 321

Query: 300 YILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
           Y ++ GF    ++AN L+DMY  C + RS   +F  M  K+V+ W A+I++Y +A   DK
Sbjct: 322 YSVKTGFISQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDK 381

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVD 419
              LF  M +   RP+   +   L        L+ GK +H Y  + G+E  + +  AL++
Sbjct: 382 VAGLFQEMGLEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALME 441

Query: 420 MYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGIT 479
           MY KCG++  A  +F   + +D+  WN ++ GY  +    EA   F +M    ++PN +T
Sbjct: 442 MYVKCGNMEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVT 500

Query: 480 FIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM 539
              +L A +    +  G+ +    +   G +        ++D+  + G L  A  +   +
Sbjct: 501 MTCILPAAASLSSLERGREMHAYALR-RGYLEDDFVANALIDMYVKCGALLLARRLFDRL 559

Query: 540 PLRPNMIVWGALLAASKLH 558
               N+I W  ++A   +H
Sbjct: 560 S-NKNLISWTIMVAGYGMH 577


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 223/690 (32%), Positives = 369/690 (53%), Gaps = 54/690 (7%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTR---------------------- 38
           +K  +G  +L+   Q HA  +K  +  S   + N L                        
Sbjct: 99  LKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRD 158

Query: 39  ---YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH---LGKE 92
              +NS + +  +  K   AL  +  M+    E+ +FT+ ++  AC+ + + H   LGK+
Sbjct: 159 QVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQ 218

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HG++++ G D   + +NAL+ MY++ G +  ++ LF+   +RD+VSW+TMI  + +   
Sbjct: 219 LHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDR 277

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
             EAL   R M    +    V + S++   + +  +D+GK IHA V+RN  D      + 
Sbjct: 278 FSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRN-NDLIENSFVG 336

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE-ENV 271
           +AL+DMY  C  +   +++F+ +    +  W  MISGY R     + + LF EMI+   +
Sbjct: 337 SALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGL 396

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P+  T+ S++  C         + +H Y ++ GF+    + NAL+DMY +  ++  + T
Sbjct: 397 LPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISET 456

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV-----------------SKVRP 374
           +FD M+ +D + WN +I+ Y  +     A  L   M+                     +P
Sbjct: 457 IFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKP 516

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           N +T++ +L  C    A+  GK +H Y  +  L  D+ + +ALVDMYAKCG +N + R+F
Sbjct: 517 NAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVF 576

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM----ERSG-VKPNGITFIGLLNACSH 489
           +E   +++  WN ++   GMHG GEEAL  F +M     R G  KPN +TFI +  ACSH
Sbjct: 577 NEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSH 636

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI-VW 548
           +GL++EG ++F +M H  G+ P  +HY C+VDLLGRAG L+EA+E++ +MP   + +  W
Sbjct: 637 SGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAW 696

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
            +LL A ++H+N  +GE+AA  +L +EP    + VL+SNIY+ A  WN    VR+ M+++
Sbjct: 697 SSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQM 756

Query: 609 RVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
            VKKEPG S +E    VHKF+ G + + +S
Sbjct: 757 GVKKEPGCSWIEFRDEVHKFMAGDVSHPQS 786



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 165/538 (30%), Positives = 270/538 (50%), Gaps = 30/538 (5%)

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
           S  ++N    A++ Y  M  +G+  DNF  P +LKA + +     G++IH  A+K G   
Sbjct: 66  SRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGS 125

Query: 105 DA-YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
            +  V+N L+ MY +CG +     +FD + +RD VSW++ I    R    E+ALE  R M
Sbjct: 126 SSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAM 185

Query: 164 RFMDIRPSEVAMISMVSLFADVA---DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
           +  ++  S   ++S+    +++     + LGK +H   +R   D+K       AL+ MY+
Sbjct: 186 QMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLR-VGDQK--TFTNNALMAMYA 242

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           K G +  +K LF       +VSW  MIS + + +  +E +  F  M+ E V    +TI S
Sbjct: 243 KLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIAS 302

Query: 281 LIIECGFVGGLQLGKWLHAYILRNG--FEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           ++  C  +  L +GK +HAY+LRN    E S  + +ALVDMY  CR++ S R +FD +  
Sbjct: 303 VLPACSHLERLDVGKEIHAYVLRNNDLIENSF-VGSALVDMYCNCRQVESGRRVFDHILG 361

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           + + +WNA+IS YA+    +KA  LFI M KV+ + PN  TM  ++  C    A    + 
Sbjct: 362 RRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKES 421

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H Y  K G + D  ++ AL+DMY++ G ++ +  +F     RD   WN M+ GY + G 
Sbjct: 422 IHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGR 481

Query: 458 GEEALIFFVDMER-----------------SGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
              AL+   +M+R                    KPN IT + +L  C+    + +GK + 
Sbjct: 482 YSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIH 541

Query: 501 DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
              +  + L   I     +VD+  + G L+ +  +   MP + N+I W  L+ A  +H
Sbjct: 542 AYAIRNM-LASDITVGSALVDMYAKCGCLNLSRRVFNEMPNK-NVITWNVLIMACGMH 597



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/426 (29%), Positives = 212/426 (49%), Gaps = 9/426 (2%)

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           P+R   SW   +R   R     EA+    EM     RP   A  +++   + + D+  G+
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
            IHA  V+        V +A  L++MY KCG +    ++F+R+     VSW   I+   R
Sbjct: 113 QIHAAAVKFGYGSS-SVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCR 171

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG---GLQLGKWLHAYILRNGFEFS 309
             +  + +  F  M  EN+  S  T++S+ + C  +G   GL+LGK LH Y LR G + +
Sbjct: 172 FEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGDQKT 231

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
               NAL+ MY K   +  ++ LF+    +D++ WN +IS+++Q+    +A   F  M +
Sbjct: 232 FT-NNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVL 290

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI-EKQGLEVDVILKTALVDMYAKCGDVN 428
             V  + VT+  +L  C+    L++GK +H Y+     L  +  + +ALVDMY  C  V 
Sbjct: 291 EGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVE 350

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER-SGVKPNGITFIGLLNAC 487
              R+F   + R I +WNAM++GY  +G  E+ALI F++M + +G+ PN  T   ++ AC
Sbjct: 351 SGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPAC 410

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
            H    +  +S+    V  LG          ++D+  R G +D +  +  SM +R + + 
Sbjct: 411 VHCEAFSNKESIHGYAVK-LGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVR-DRVS 468

Query: 548 WGALLA 553
           W  ++ 
Sbjct: 469 WNTMIT 474


>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  380 bits (977), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/594 (33%), Positives = 334/594 (56%), Gaps = 6/594 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+  Y         L +Y  M + G   D+ T P +LKACA       G+E+HG  +
Sbjct: 10  WNTLIRGY-SIAGVGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP-EEAL 157
           K G + D +V N L+  Y  CG L  A  +FDEMP +D+VSW+TMI  +   G    +AL
Sbjct: 69  KLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDAL 128

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           ++ R M    ++P+ + + S + +  ++     G+ +H   +R   +    + IA +LID
Sbjct: 129 DMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESD--IFIANSLID 186

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+K G+   A  +F +L+  +VVSW  MI+ + +       V L  +M +    P+ +T
Sbjct: 187 MYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVT 246

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             +++  C  +G ++ GK +HA  +  G  F L ++NAL DMY K   ++ AR +FD   
Sbjct: 247 FTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVFD-TS 305

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +D + +N +I  ++Q     ++  LF  M++  ++ + V+ +G LS C    A++ GK 
Sbjct: 306 LRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIKQGKE 365

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H ++ ++   + + +  +L+D Y KCG +  A  +F     +D+  WN M+ GYGM G 
Sbjct: 366 IHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDRMTNKDVASWNTMILGYGMLGE 425

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            + A+  F +M +  V+ + ++FI +L+ACSH GL+ +G+  FD++    G+ P   HY 
Sbjct: 426 LDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKGRKYFDEL-KARGIEPTQMHYA 484

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLLGRAGL++EA E+IK +P+ P+  +WGALL A +++ N  +   AA  + E++P+
Sbjct: 485 CMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACRIYGNLELAAWAAEHLFELKPE 544

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           + GY  L+SN+YA   RW++   +R +MK   VKK PG S V++    H F+ G
Sbjct: 545 HSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCSWVQIGEQAHAFVVG 598



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 3/110 (2%)

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
           +WN ++ GY + G G   L  +  M R GV+P+  TF  +L AC+ A  V +G+ V   +
Sbjct: 9   LWNTLIRGYSIAGVG-GGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSV 67

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           V  LG    +     ++   G  G L +A  +   MP + +++ W  ++ 
Sbjct: 68  VK-LGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEK-DLVSWNTMIG 115


>gi|297816638|ref|XP_002876202.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322040|gb|EFH52461.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 769

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 225/650 (34%), Positives = 344/650 (52%), Gaps = 34/650 (5%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTNIINP--------------------------LTRYNSL 42
           +L Q R+ H HI+ ++ K  Y  I+N                           L  Y S+
Sbjct: 79  SLAQGRKIHDHILNSNCK--YDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSV 136

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           +T Y +N + + A+ +Y  M +     D F   +I+KACA      LGK++H   IK   
Sbjct: 137 ITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIKLES 196

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
                  NALI MY     +  A  +F  +P +D++SWS++I G+ + G   EAL  ++E
Sbjct: 197 SSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKE 256

Query: 163 M-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA-TALIDMYS 220
           M  F    P+E    S +   + +   D G  IH   +   K E  G AIA  +L DMY+
Sbjct: 257 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCI---KLELTGNAIAGCSLCDMYA 313

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           +CG L  A+++FN++ +    SW V+I+G       +E V +F+EM      P  I++ S
Sbjct: 314 RCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRS 373

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK- 339
           L+        L  G  +H++I++ GF   L++ N+L+ MY  C ++     LF+  ++K 
Sbjct: 374 LLCAQTKPMALCQGMQIHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKA 433

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           D + WNA+++A  Q     +   LF  M VS+  P+ +TM  LL  C E  +L++G  +H
Sbjct: 434 DSVSWNAILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH 493

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
            Y  K GL ++  +K  L+DMYAKCG +  A R+F      D+  W+ ++ GY   G GE
Sbjct: 494 CYSWKTGLVLEQFIKNGLIDMYAKCGSLRQARRIFDSMDNGDVVSWSTLIVGYAQSGFGE 553

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           EALI F +M+ SG++PN +TF+G+L ACSH GLV EG  ++  M    G+ P  EH  C+
Sbjct: 554 EALILFREMKSSGIEPNHVTFVGVLTACSHVGLVEEGLKLYAIMQTEHGISPTKEHCSCV 613

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNY 579
           VDLL RAG L+EA   I  M L P+++VW  LL+A K   N  + + AA  IL+I+P N 
Sbjct: 614 VDLLARAGHLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVDLAQKAAENILKIDPFNS 673

Query: 580 GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
             +VL+ +++A +  W D A +R  MK+  VKK PG S ++V   +H F 
Sbjct: 674 TAHVLLCSMHASSGNWEDAALLRSSMKKHDVKKIPGQSWIDVEDKIHIFF 723



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 247/516 (47%), Gaps = 7/516 (1%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           N  + S  +N+    AL  + F +KN S ++   T  +++ AC+       G++IH   +
Sbjct: 32  NDHINSLCRNSFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 91

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +    D  ++N ++ MY +CGSL  AR +FD MP R++VS++++I GY + G   EA+ 
Sbjct: 92  NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQEAEAIT 151

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M   D+ P + A  S++   A   DV LGK +HA V++   +    +    ALI M
Sbjct: 152 LYLKMLQADLVPDQFAFGSIIKACACAGDVVLGKQLHAQVIK--LESSSHLIAQNALIAM 209

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF-PSEIT 277
           Y +   ++ A ++F  +    ++SW+ +I+G+ +     E +    EM+   VF P+E  
Sbjct: 210 YVRFNQMSDASKVFYGIPAKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 269

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             S +  C  +     G  +H   ++     +     +L DMY +C  + SAR +F+ ++
Sbjct: 270 FGSSLKACSSLLRPDYGSQIHGLCIKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIE 329

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
             D   WN +I+  A     D+A  +F  M+ S   P+ +++  LL   T+  AL  G  
Sbjct: 330 RPDTASWNVIIAGLANNGYADEAVSVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQ 389

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHG 456
           +H++I K G   D+ +  +L+ MY  C D+   + LF +   + D   WNA++     H 
Sbjct: 390 IHSFIIKCGFLADLSVCNSLLTMYTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHE 449

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
              E L  F  M  S  +P+ IT   LL  C     +  G  V        GLV +    
Sbjct: 450 QPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQV-HCYSWKTGLVLEQFIK 508

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
             ++D+  + G L +A  +  SM    +++ W  L+
Sbjct: 509 NGLIDMYAKCGSLRQARRIFDSMD-NGDVVSWSTLI 543



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 217/459 (47%), Gaps = 22/459 (4%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           VSN+ I   S   S +    L ++  N      S     ++R  L  EA +  ++     
Sbjct: 10  VSNSQIPATSSVVSTIKTEELMNDHIN------SLCRNSFYREAL--EAFDFAQKNSSFK 61

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALIDMYSKCGNLA 226
           IR      IS++   +    +  G+ IH  ++  NCK + +   +   ++ MY KCG+L 
Sbjct: 62  IRLR--TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTI---LNNHILSMYGKCGSLR 116

Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
            A+++F+ + + ++VS+T +I+GY +  +  E + L+ +M++ ++ P +    S+I  C 
Sbjct: 117 DAREVFDFMPERNLVSYTSVITGYSQNGQEAEAITLYLKMLQADLVPDQFAFGSIIKACA 176

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
             G + LGK LHA +++      L   NAL+ MY +  ++  A  +F G+ +KD++ W++
Sbjct: 177 CAGDVVLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASKVFYGIPAKDLISWSS 236

Query: 347 VISAYAQAHCIDKAFELFIHMK----VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
           +I+ ++Q   +   FE   H+K         PNE      L  C+     + G  +H   
Sbjct: 237 IIAGFSQ---LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLC 293

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
            K  L  + I   +L DMYA+CG ++ A R+F++    D   WN ++AG   +G  +EA+
Sbjct: 294 IKLELTGNAIAGCSLCDMYARCGFLDSARRVFNQIERPDTASWNVIIAGLANNGYADEAV 353

Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDL 522
             F +M  SG  P+ I+   LL A +    + +G  +   ++   G +  +     ++ +
Sbjct: 354 SVFSEMRNSGFIPDAISLRSLLCAQTKPMALCQGMQIHSFIIK-CGFLADLSVCNSLLTM 412

Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
                 L     + +    + + + W A+L A   H+ P
Sbjct: 413 YTFCSDLYCCFNLFEDFRNKADSVSWNAILTACLQHEQP 451


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 194/541 (35%), Positives = 311/541 (57%), Gaps = 31/541 (5%)

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           L  A  +F+ +   + + W+TMIRG+     P  +L +   M  + + P+      ++  
Sbjct: 14  LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIA----------------------------- 212
            A       G+ IH  V++   D  L V  +                             
Sbjct: 74  CAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSY 133

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           TALI  Y+  G++  A++LF+ +    VVSW  MISGY       E + LF EM++ NV 
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVR 193

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P E T ++++  C   G ++LG+ +H+++  +GF+ +L + NAL+D+Y KC E+ +A  L
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGL 253

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F G+  KDV+ WN +I  Y   +   +A  LF  M  S   PN+VTM+ +L  C   GA+
Sbjct: 254 FQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAI 313

Query: 393 EMGKWLHTYIEK--QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           ++G+W+H YI+K  +G+     L+T+L+DMYAKCGD+  A+++F+  +++ +  WNAM+ 
Sbjct: 314 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 373

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           G+ MHG  + +   F  M + G++P+ ITF+GLL+ACSH+G++  G+ +F  M     + 
Sbjct: 374 GFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMT 433

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           PK+EHYGCM+DLLG +GL  EA EMI +M + P+ ++W +LL A K+H N  + E  A  
Sbjct: 434 PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQN 493

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIR 630
           +++IEP+N    +L+SNIYA A RW DVA +R ++    +KK PG SS+EV+ +V +F+ 
Sbjct: 494 LIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFEFVV 553

Query: 631 G 631
           G
Sbjct: 554 G 554



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 158/495 (31%), Positives = 260/495 (52%), Gaps = 52/495 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  +  ++ P S+L +Y  M   G   +++T P +LK+CA+      G++IHG  +
Sbjct: 32  WNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVL 91

Query: 99  KNGLDGDAYVSNALIQM-------------------------------YSECGSLVSARY 127
           K G D D YV  +LI M                               Y+  G + SA+ 
Sbjct: 92  KLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQK 151

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           LFDE+P +DVVSW+ MI GY   G  +EALE+  EM  M++RP E   ++++S  A    
Sbjct: 152 LFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGS 211

Query: 188 VDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           ++LG+ +H+ V  +  D  L   I  ALID+YSKCG +  A  LF  L+   V+SW  +I
Sbjct: 212 IELGRQVHSWVDDHGFDSNL--KIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLI 269

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR--NG 305
            GY   N   E + LF EM+     P+++T+LS++  C  +G + +G+W+H YI +   G
Sbjct: 270 GGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKG 329

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
              + ++  +L+DMY KC +I +A  +F+ M  K +  WNA+I  +A     D +F+LF 
Sbjct: 330 VTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFS 389

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            M+   + P+++T VGLLS C+ +G L++G+  H +   + +  D  + T  ++ Y    
Sbjct: 390 RMRKIGIEPDDITFVGLLSACSHSGMLDLGR--HIF---RSMTQDYKM-TPKLEHYGCMI 443

Query: 426 DVNGAYRLFSEA--------IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP-N 476
           D+ G   LF EA        +  D  +W +++    MHG  E A  F  ++ +  ++P N
Sbjct: 444 DLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIK--IEPEN 501

Query: 477 GITFIGLLNACSHAG 491
             ++I L N  + AG
Sbjct: 502 PSSYILLSNIYASAG 516



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 167/320 (52%), Gaps = 2/320 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +N++++ Y +      AL ++  M K     D  T  T+L ACA      LG++
Sbjct: 158 VKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQ 217

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H +   +G D +  + NALI +YS+CG + +A  LF  +  +DV+SW+T+I GY    L
Sbjct: 218 VHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLIGGYTHMNL 277

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            +EAL + +EM      P++V M+S++   A +  +D+G+ IH  + +  K      ++ 
Sbjct: 278 YKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 337

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T+LIDMY+KCG++  A Q+FN +   S+ SW  MI G+      +    LF+ M +  + 
Sbjct: 338 TSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIE 397

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSART 331
           P +IT + L+  C   G L LG+ +   + ++      L     ++D+ G     + A  
Sbjct: 398 PDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 457

Query: 332 LFDGMK-SKDVMIWNAVISA 350
           + + M+   D +IW +++ A
Sbjct: 458 MINTMEMEPDGVIWCSLLKA 477


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 213/595 (35%), Positives = 338/595 (56%), Gaps = 6/595 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMR-KNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           L  +N LV  Y K      A+ +Y  M    G + D +T P +L+ C  +     G+E+H
Sbjct: 160 LFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVH 219

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
              ++ G + D  V NALI MY +CG + SAR LFD MP RD++SW+ MI GY   G+  
Sbjct: 220 VHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMGH 279

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           E L++   MR + + P  + + S++S    + D  LG+ IHA V+       + +++  +
Sbjct: 280 EGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITT--GFAVDISVCNS 337

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L  MY   G+   A++LF+R++   +VSWT MISGY       + +  +  M +++V P 
Sbjct: 338 LTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQDSVKPD 397

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           EIT+ +++  C  +G L  G  LH   ++      + +AN L++MY KC+ I  A  +F 
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH 457

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            +  K+V+ W ++I+     +   +A   F  MK++ ++PN +T+   L+ C   GAL  
Sbjct: 458 NIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMT-LQPNAITLTAALAACARIGALMC 516

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           GK +H ++ + G+ +D  L  AL+DMY +CG +N A+  F+    +D+  WN ++ GY  
Sbjct: 517 GKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNSQ-KKDVSSWNILLTGYSE 575

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
            G G   +  F  M ++ V+P+ ITFI LL  C  + +V +G   F KM    G+ P ++
Sbjct: 576 RGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKM-EEYGVTPNLK 634

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HY C+VDLLGRAG L EAH+ I+ MP+ P+  VWGALL A ++H N  +GE++A +I E+
Sbjct: 635 HYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSAQRIFEL 694

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +  + GY +L+ N+YA   +W +VA VRR+MKE  +  + G S VEV G VH F+
Sbjct: 695 DKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFL 749



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 146/508 (28%), Positives = 258/508 (50%), Gaps = 9/508 (1%)

Query: 49  NNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYV 108
           N K   A+ +   M++    VD      +++ C        G +++  A+ +       +
Sbjct: 72  NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVEL 131

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD- 167
            NA + M+   G+LV A Y+F +M  R++ SW+ ++ GY + G  +EA+ +   M ++  
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGG 191

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
           ++P       ++     + D+  G+ +H  VVR     +L + +  ALI MY KCG++  
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGREVHVHVVR--YGYELDIDVVNALITMYVKCGDVKS 249

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A+ LF+R+ +  ++SW  MISGY      +EG++LF  M   +V P  +T+ S+I  C  
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACEL 309

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
           +G  +LG+ +HAY++  GF   +++ N+L  MY      R A  LF  M  KD++ W  +
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTM 369

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           IS Y      +KA + +  M    V+P+E+T+  +LS C   G L+ G  LH    K  L
Sbjct: 370 ISGYEYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
              VI+   L++MY+KC  ++ A  +F     +++  W +++AG  ++    EALIFF  
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQ 489

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRA 526
           M+ + ++PN IT    L AC+  G +  GK +   ++  G+GL   + +   ++D+  R 
Sbjct: 490 MKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN--ALLDMYVRC 546

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           G ++ A     S   + ++  W  LL  
Sbjct: 547 GRMNIAWNQFNSQ--KKDVSSWNILLTG 572


>gi|147819178|emb|CAN71462.1| hypothetical protein VITISV_018656 [Vitis vinifera]
          Length = 787

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 207/633 (32%), Positives = 340/633 (53%), Gaps = 47/633 (7%)

Query: 21  IKTHFKFSYTNIINPLTRYNS-----LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIP 75
           +K+ F    + + + +   N+     L+  Y ++ +   A+ ++  + + G E++ F   
Sbjct: 84  VKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFT 143

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           TILK    +    LG  IH    K G + +A+V  ALI  YS CG +  AR +FD +  +
Sbjct: 144 TILKLLVSMDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYK 203

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
           D+VSW+ M+  +      +EAL++  +MR +  +P+     S+      +   D+GK++H
Sbjct: 204 DMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVH 263

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
            C +++    +L + +  AL+D+Y+K G++  A+  F  + +  V+ W+ MI+ Y + ++
Sbjct: 264 GCALKS--RYELDLYVGVALLDLYTKSGDIDDARXAFEEIPKKDVIPWSFMIARYAQSDQ 321

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
             E V +F +M +  V P++ T  S++  C  + GL LG  +H ++++ G    + ++NA
Sbjct: 322 SKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNA 381

Query: 316 LVDMYGKCREIRSARTLF-DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
           L+D+Y KC  + ++  LF +     DV  WN VI  + Q    +KA  LF++M   +V+ 
Sbjct: 382 LMDVYAKCGRMENSMXLFAESPHRNDVTPWNTVIVGHVQLGDGEKALRLFLNMLEYRVQA 441

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
            EVT    L  C    ALE G  +H+   K   + D+++  AL+DMYAKCG +  A  +F
Sbjct: 442 TEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVF 501

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
                +D   WNAM++GY MHG                             AC++AGL+ 
Sbjct: 502 DLMNKQDEVSWNAMISGYSMHGL----------------------------ACANAGLLD 533

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +G++ F  M+   G+ P IEHY CMV LLGR G LD+A ++I  +P +P+++VW ALL A
Sbjct: 534 QGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGA 593

Query: 555 SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEP 614
             +H +  +G I+A  +LE+EPQ+   +VL+SN+YA A RW++VA VR+ MK   VKKEP
Sbjct: 594 CVIHNDIELGRISAQHVLEMEPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEP 653

Query: 615 GFSSVEVNGLVHKFIRG-----------GMVNW 636
           G S +E  G VH F  G           GM+ W
Sbjct: 654 GLSWIESQGTVHSFTVGDTSHPEVRVINGMLEW 686



 Score = 43.5 bits (101), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 3/119 (2%)

Query: 369 VSKVRPNEV---TMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
           V  V P+E         L  C +      GK LH  I K+G  +D+     L++MY K  
Sbjct: 28  VGHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSD 87

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
            +  A +LF E   R+   +  ++ GY       EA+  FV + R G + N   F  +L
Sbjct: 88  FLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTIL 146


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 216/609 (35%), Positives = 325/609 (53%), Gaps = 19/609 (3%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           FS+T +I  L ++           +   A +++  M++NG   +  T  +IL A A    
Sbjct: 387 FSWTVMIGGLAQHG----------RGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIAST 436

Query: 87  THLG--KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
           + L   K +H  A + G   D  + NALI MY++CGS+  AR +FD M +RDV+SW+ M+
Sbjct: 437 SALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMM 496

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--C 202
            G  + G   EA  V  +M+   + P     +S+++       ++    +H   V     
Sbjct: 497 GGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLI 556

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
            D ++G    +A I MY +CG++  A+ LF++L+   V +W  MI G  +     E + L
Sbjct: 557 SDFRVG----SAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSL 612

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F +M  E   P   T ++++        L+  K +H++    G    L + NALV  Y K
Sbjct: 613 FLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSK 671

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C  ++ A+ +FD M  ++V  W  +I   AQ  C   AF  F+ M    + P+  T V +
Sbjct: 672 CGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSI 731

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           LS C   GALE  K +H +    GL  D+ +  ALV MYAKCG ++ A  +F + + RD+
Sbjct: 732 LSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDV 791

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             W  M+ G   HG G EAL FFV M+  G KPNG +++ +L ACSHAGLV EG+  F  
Sbjct: 792 FSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLS 851

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
           M    G+ P +EHY CMVDLLGRAGLL+EA   I +MP+ P+   WGALL A   + N  
Sbjct: 852 MTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLE 911

Query: 563 MGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
           M E AA + L+++P++    VL+SNIYA   +W     VR +M+   ++KEPG S +EV+
Sbjct: 912 MAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIEVD 971

Query: 623 GLVHKFIRG 631
             +H F+ G
Sbjct: 972 NRIHSFVVG 980



 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 174/583 (29%), Positives = 295/583 (50%), Gaps = 26/583 (4%)

Query: 64  KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLV 123
           + G  +D+F+   IL+ C +     L K++H   IK+G++ + YV+N L+++Y  CG L 
Sbjct: 111 QQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQ 170

Query: 124 SARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFA 183
            AR +FD++  +++  W+TMI GY   G  E+A+ V  +MR    +P+E+  +S++    
Sbjct: 171 CARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACC 230

Query: 184 DVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSW 243
              ++  GK IHA ++++       V + TAL++MY KCG++  A+ +F+++ + +V+SW
Sbjct: 231 CPVNLKWGKKIHAHIIQSGFQSD--VRVETALVNMYVKCGSIEDAQLIFDKMVERNVISW 288

Query: 244 TVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
           TVMI G        E   LF +M  E   P+  T +S++      G L+  K +H++ + 
Sbjct: 289 TVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVN 348

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
            G    L + NALV MY K   I  AR +FDGM  +D+  W  +I   AQ     +AF L
Sbjct: 349 AGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSL 408

Query: 364 FIHMKVSKVRPNEVTMVGLL--SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
           F+ M+ +   PN  T + +L  S      ALE  K +H + E+ G   D+ +  AL+ MY
Sbjct: 409 FLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMY 468

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
           AKCG ++ A  +F     RD+  WNAMM G   +GCG EA   F+ M++ G+ P+  T++
Sbjct: 469 AKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYL 528

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
            LLN       +     V    V   GL+         + +  R G +D+A  +   + +
Sbjct: 529 SLLNTHGSTDALEWVNEVHKHAVE-TGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSV 587

Query: 542 RPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNY------GYNVLMSNIYAVANRW 595
           R ++  W A++  +   +    G  A +  L+++ + +        N+L +N+   A  W
Sbjct: 588 R-HVTTWNAMIGGAAQQR---CGREALSLFLQMQREGFIPDATTFINILSANVDEEALEW 643

Query: 596 NDVAGVRRVMKEIRVK-KEPGFSSVEV-NGLVHKFIRGGMVNW 636
                    +KE+     + G   + V N LVH + + G V +
Sbjct: 644 ---------VKEVHSHATDAGLVDLRVGNALVHTYSKCGNVKY 677



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 166/581 (28%), Positives = 283/581 (48%), Gaps = 39/581 (6%)

Query: 8   LNLEQTRQCHAHIIKTHFKFSY---TNIINPLTRYNSLVTSYIKNNK------------- 51
           +NL+  ++ HAHII++ F+      T ++N   +  S+  + +  +K             
Sbjct: 233 VNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMI 292

Query: 52  --------PSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD 103
                      A +++  M++ G   +++T  +IL A A        KE+H  A+  GL 
Sbjct: 293 GGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLA 352

Query: 104 GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
            D  V NAL+ MY++ GS+  AR +FD M  RD+ SW+ MI G  + G  +EA  +  +M
Sbjct: 353 LDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQM 412

Query: 164 RFMDIRPSEVAMISMV--SLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATALID 217
           +     P+    +S++  S  A  + ++  K +H         E+ G    + I  ALI 
Sbjct: 413 QRNGCLPNLTTYLSILNASAIASTSALEWVKVVHK------HAEEAGFISDLRIGNALIH 466

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+KCG++  A+ +F+ +    V+SW  M+ G  +    +E   +F +M +E + P   T
Sbjct: 467 MYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTT 526

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
            LSL+   G    L+    +H + +  G      + +A + MY +C  I  AR LFD + 
Sbjct: 527 YLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLS 586

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            + V  WNA+I   AQ  C  +A  LF+ M+     P+  T + +LS   +  ALE  K 
Sbjct: 587 VRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKE 646

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H++    GL VD+ +  ALV  Y+KCG+V  A ++F + + R++  W  M+ G   HGC
Sbjct: 647 VHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGC 705

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G +A   F+ M R G+ P+  T++ +L+AC+  G +   K V +  V   GLV  +    
Sbjct: 706 GHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSA-GLVSDLRVGN 764

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            +V +  + G +D+A  +   M  R ++  W  ++     H
Sbjct: 765 ALVHMYAKCGSIDDARSVFDDMVER-DVFSWTVMIGGLAQH 804



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 143/450 (31%), Positives = 232/450 (51%), Gaps = 4/450 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++  Y +      A+ +Y  MR+   + +  T  +ILKAC   +    GK+IH   I
Sbjct: 187 WTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHII 246

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++G   D  V  AL+ MY +CGS+  A+ +FD+M  R+V+SW+ MI G    G  +EA  
Sbjct: 247 QSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFH 306

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+     P+    +S+++  A    ++  K +H+  V       L + +  AL+ M
Sbjct: 307 LFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVN--AGLALDLRVGNALVHM 364

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G++  A+ +F+ + +  + SWTVMI G  +     E   LF +M      P+  T 
Sbjct: 365 YAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTY 424

Query: 279 LSLIIECGF--VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           LS++          L+  K +H +    GF   L + NAL+ MY KC  I  AR +FDGM
Sbjct: 425 LSILNASAIASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGM 484

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             +DV+ WNA++   AQ  C  +AF +F+ M+   + P+  T + LL+      ALE   
Sbjct: 485 CDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVN 544

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H +  + GL  D  + +A + MY +CG ++ A  LF +   R +  WNAM+ G     
Sbjct: 545 EVHKHAVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQR 604

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           CG EAL  F+ M+R G  P+  TFI +L+A
Sbjct: 605 CGREALSLFLQMQREGFIPDATTFINILSA 634



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 196/384 (51%), Gaps = 15/384 (3%)

Query: 258 EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALV 317
           + V +    +++ +     + ++++  C     + L K +H  I+++G E +L +AN L+
Sbjct: 101 DAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLL 160

Query: 318 DMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEV 377
            +Y +C  ++ AR +FD +  K++ IW  +I  YA+    + A  ++  M+    +PNE+
Sbjct: 161 RVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEI 220

Query: 378 TMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
           T + +L  C     L+ GK +H +I + G + DV ++TALV+MY KCG +  A  +F + 
Sbjct: 221 TYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKM 280

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
           + R++  W  M+ G   +G G+EA   F+ M+R G  PN  T++ +LNA + AG +   K
Sbjct: 281 VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVK 340

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
            V    V+  GL   +     +V +  ++G +D+A  +   M  R ++  W  ++     
Sbjct: 341 EVHSHAVNA-GLALDLRVGNALVHMYAKSGSIDDARVVFDGMTER-DIFSWTVMIGGLAQ 398

Query: 558 HKNPSMGEIAATQILEIEPQ----NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           H     G+ A +  L+++      N    + + N  A+A+  + +  V+ V K     +E
Sbjct: 399 H---GRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIAST-SALEWVKVVHKH---AEE 451

Query: 614 PGF-SSVEV-NGLVHKFIRGGMVN 635
            GF S + + N L+H + + G ++
Sbjct: 452 AGFISDLRIGNALIHMYAKCGSID 475


>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
 gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis]
          Length = 1113

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 215/588 (36%), Positives = 335/588 (56%), Gaps = 17/588 (2%)

Query: 24   HFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQ 83
            H  F Y  I + +  +N+L+  Y +N    SAL ++  M K G      T+  +L +C Q
Sbjct: 497  HNAFDYMPIRD-VVSWNALICGYSRNGYDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQ 555

Query: 84   VLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTM 143
            + +   GK IHGF IK+GL  D  V NAL  MY++CG L +A YLF+EM ++ VVSW+TM
Sbjct: 556  LELVFQGKSIHGFGIKSGLHLDPQVKNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTM 615

Query: 144  IRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
            I  Y + G  +EA+ V + M    +  S+V ++S+ S  A+       ++IH      C 
Sbjct: 616  IGAYGQNGFFDEAMFVFKRMIGAGVEVSQVTIMSLPSANANP------ESIH------CY 663

Query: 204  DEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
              K+G+A    + T+LI MY++ G+  +A+ L+  L Q ++VS T +I+ Y     +   
Sbjct: 664  TIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLPQKNLVSLTAIITSYAEAGNLGLV 723

Query: 260  VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
            +  F++M + N+ P  + +LS++        + +G   H Y +++G +    + N L+ M
Sbjct: 724  MESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTFNLVTNGLISM 783

Query: 320  YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
            Y K   + +   LF GM  K ++ WN+VIS   QA     A ELF  MK+    P+ +T+
Sbjct: 784  YSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGRASHAIELFCQMKMHGCNPDAITI 843

Query: 380  VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
              LLS C++ G L+ G+ LH+YI +  LE++  + TAL+ MY KCG +  A R+F     
Sbjct: 844  ASLLSGCSQLGYLQFGERLHSYILRNKLEMEDFVGTALIHMYTKCGSIVHAERVFKSIGK 903

Query: 440  RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
              +  WNAM++GY  +G   +AL  + +M+  GV+P+ ITF+G+L AC+H GL+ EG+  
Sbjct: 904  PCLATWNAMISGYSCYGFEHKALTCYSEMQEQGVEPDKITFLGVLAACTHGGLIHEGRRY 963

Query: 500  FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK 559
            F  M     +VP ++H  CMV LL R GL +EA   IK+M   P+  VWGA L+A  +H+
Sbjct: 964  FQIMTKVYDMVPTLQHCACMVGLLARVGLFEEALLFIKNMEKEPDSAVWGAFLSACCIHQ 1023

Query: 560  NPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
               +GE  A ++  ++ +N G  VLMSN+YAV  RW+DVA VR +MK+
Sbjct: 1024 EVKLGEYLAKKLYLLDCRNGGLYVLMSNLYAVTGRWDDVARVREMMKD 1071



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 225/471 (47%), Gaps = 26/471 (5%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           +I    IK G+D   YVS AL+ +Y + G +  A   FD MP RDVVSW+ +I GY R G
Sbjct: 463 QIQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNG 522

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
               ALE+  +M  +   P +  ++ ++     +  V  GK+IH   +++     L   +
Sbjct: 523 YDFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKS--GLHLDPQV 580

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
             AL  MY+KCG+L  A+ LF  +   SVVSW  MI  Y +    +E + +F  MI   V
Sbjct: 581 KNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGV 640

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
             S++TI+SL             + +H Y ++ G     ++  +L+ MY +      A  
Sbjct: 641 EVSQVTIMSL------PSANANPESIHCYTIKVGLADDASVVTSLICMYARYGSTDHAEL 694

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           L+  +  K+++   A+I++YA+A  +    E F  M    ++P+ V M+ +L    +   
Sbjct: 695 LYWSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVH 754

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           + +G   H Y  K GL+   ++   L+ MY+K  +V   + LFS    + +  WN++++G
Sbjct: 755 ICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISG 814

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
               G    A+  F  M+  G  P+ IT   LL+ CS  G +      F + +H   L  
Sbjct: 815 CVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLGYLQ-----FGERLHSYILRN 869

Query: 512 KIEHYGCMVDLLGRA--------GLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           K+E    M D +G A        G +  A  + KS+  +P +  W A+++ 
Sbjct: 870 KLE----MEDFVGTALIHMYTKCGSIVHAERVFKSIG-KPCLATWNAMISG 915


>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 214/632 (33%), Positives = 332/632 (52%), Gaps = 71/632 (11%)

Query: 67  SEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSAR 126
           S +D+     +L  C +       + +H   IK     + ++ N L+ +Y +CG L  AR
Sbjct: 15  SFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDAR 74

Query: 127 YLFDEM-------------------------------PNRDVVSWSTMIRGYHRGGLPEE 155
            +FD M                               P RD  SW+ M+ G+ +    EE
Sbjct: 75  KVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEE 134

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL  + +M   D   +E +  S +S  A + D+ +G  IH  + ++     L V + +AL
Sbjct: 135 ALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKS--RYSLDVYMGSAL 192

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMYSKC  +A A++ F+ ++  ++VSW  +I+ Y +     + + +F  M+   + P E
Sbjct: 193 VDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDE 252

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILR-NGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           IT+ S+   C  +  ++ G  +HA +++ + +   L + NALVDMY KCR +  AR +FD
Sbjct: 253 ITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFD 312

Query: 335 GMKSKDVMI-------------------------------WNAVISAYAQAHCIDKAFEL 363
            M  +DV+                                WNA+I+ Y Q    ++A  L
Sbjct: 313 RMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRL 372

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL------EVDVILKTAL 417
           F+ +K   + P   T   LL+ C     L++G+  HT+I K G       + D+ +  +L
Sbjct: 373 FLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSL 432

Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
           +DMY KCG V     +F   + RD   WNAM+ GY  +G G EAL  F +M  SG +P+ 
Sbjct: 433 IDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDH 492

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK 537
           +T IG+L+ACSHAGLV EG+  F  M    GLVP  +HY CMVDLLGRAG LDEA+ +I+
Sbjct: 493 VTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQ 552

Query: 538 SMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWND 597
           +MP+ P+ +VWG+LLAA K+H N ++G+  A ++LEI+P N G  VL+SN+YA   RW D
Sbjct: 553 TMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKD 612

Query: 598 VAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           V  VR+ M+++ V K+PG S + +   +H F+
Sbjct: 613 VVRVRKQMRQMGVIKQPGCSWISIQSHLHVFM 644



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 149/513 (29%), Positives = 258/513 (50%), Gaps = 64/513 (12%)

Query: 4   KNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRY---------------------NSL 42
           K GFL  E  R+   H+ + +  FS+  ++  LT++                     N++
Sbjct: 66  KCGFL--EDARKVFDHMQQRN-TFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAM 122

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           V+ + + ++   AL     M      ++ ++  + L ACA ++   +G +IHG   K+  
Sbjct: 123 VSGFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRY 182

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
             D Y+ +AL+ MYS+C  + SA+  FD+M  R++VSW+++I  Y + G   +ALEV   
Sbjct: 183 SLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVR 242

Query: 163 MRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC 222
           M    I P E+ + S+ S  A ++ +  G  IHA V+++ K  +  + +  AL+DMY+KC
Sbjct: 243 MMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDK-YRNDLVLGNALVDMYAKC 301

Query: 223 GNLAYAKQLFNRLN-------------------------------QNSVVSWTVMISGYI 251
             +  A+ +F+R+                                + +VVSW  +I+GY 
Sbjct: 302 RRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYT 361

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF--- 308
           +  E  E VRLF  +  E+++P+  T  +L+  C  +  L+LG+  H +IL++GF F   
Sbjct: 362 QNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSG 421

Query: 309 ---SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
               + + N+L+DMY KC  +   R +F+ M  +D + WNA+I  YAQ     +A E+F 
Sbjct: 422 EDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFR 481

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-WLHTYIEKQGLEVDVILKTALVDMYAKC 424
            M VS  RP+ VTM+G+LS C+ AG +E G+ +  +   + GL       T +VD+  + 
Sbjct: 482 EMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRA 541

Query: 425 GDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
           G ++ A  L     +  D  +W +++A   +HG
Sbjct: 542 GCLDEANNLIQTMPMEPDAVVWGSLLAACKVHG 574


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 210/619 (33%), Positives = 327/619 (52%), Gaps = 62/619 (10%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           M + G+ +D+FT+P +LKAC ++     G   HG    NG + + ++ NAL+ MYS CGS
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 122 LVSARYLFDEMPNR---DVVSWSTMIRGYHRGGLPEEALEVMREMRFM------DIRPSE 172
           L  A  +FDE+  R   DV+SW++++  + +      AL++  +M  +      + R   
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 173 VAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLF 232
           +++++++     +  V   K +H   +RN     L V +  ALID Y+KCG +  A ++F
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRN--GTFLDVFVGNALIDAYAKCGLMENAVKVF 178

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV--------------------- 271
           N +    VVSW  M++GY +         LF  M +EN+                     
Sbjct: 179 NMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 238

Query: 272 --------------FPSEITILSLIIECGFVGGLQLGKWLHAYILRN----------GFE 307
                          P+ +TI+S++  C  +G    G  +HAY L+N          G +
Sbjct: 239 EALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGED 298

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDG--MKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
             L + NAL+DMY KCR  ++AR++FD   ++ ++V+ W  +I  +AQ    + A +LF+
Sbjct: 299 EDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFV 358

Query: 366 HM--KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI--EKQGLEVDVILKTALVDMY 421
            M  +   V PN  T+  +L  C    A+ +GK +H Y+    Q       +   L++MY
Sbjct: 359 EMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMY 418

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
           +KCGDV+ A  +F     +    W +MM GYGMHG G EAL  F  M ++G  P+ ITF+
Sbjct: 419 SKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFL 478

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
            +L ACSH G+V +G S FD M    GL P+ EHY   +DLL R G LD+A + +K MP+
Sbjct: 479 VVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPM 538

Query: 542 RPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGV 601
            P  +VW ALL+A ++H N  + E A  +++E+  +N G   L+SNIYA A RW DVA +
Sbjct: 539 EPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARI 598

Query: 602 RRVMKEIRVKKEPGFSSVE 620
           R +MK+  +KK PG S V+
Sbjct: 599 RHLMKKSGIKKRPGCSWVQ 617



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 145/498 (29%), Positives = 253/498 (50%), Gaps = 64/498 (12%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFM------RKNGSEVDNFTIPTILKACAQVLM 86
           I+ +  +NS+V++++K++   +AL++++ M      +      D  +I  IL AC  +  
Sbjct: 76  IDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKA 135

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
               KE+HG AI+NG   D +V NALI  Y++CG + +A  +F+ M  +DVVSW+ M+ G
Sbjct: 136 VPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAG 195

Query: 147 YHRGG----------------LP-------------------EEALEVMREMRFMDIRPS 171
           Y + G                +P                    EAL V R+M F    P+
Sbjct: 196 YSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPN 255

Query: 172 EVAMISMVSLFADVADVDLGKAIHACVVRNC----------KDEKLGVAIATALIDMYSK 221
            V +IS++S  A +     G  IHA  ++NC          +DE L   +  ALIDMYSK
Sbjct: 256 CVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDL--MVYNALIDMYSK 313

Query: 222 CGNLAYAKQLFNR--LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE--NVFPSEIT 277
           C +   A+ +F+   L + +VV+WTVMI G+ +  + N+ ++LF EMI E   V P+  T
Sbjct: 314 CRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYT 373

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA--MANALVDMYGKCREIRSARTLFDG 335
           I  +++ C  +  +++GK +HAY+LR+    S A  +AN L++MY KC ++ +AR +FD 
Sbjct: 374 ISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDS 433

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M  K  + W ++++ Y       +A ++F  M+ +   P+++T + +L  C+  G ++ G
Sbjct: 434 MSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQG 493

Query: 396 -KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYG 453
             +  +     GL          +D+ A+ G ++ A++   +  +     +W A+++   
Sbjct: 494 LSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACR 553

Query: 454 MHG---CGEEALIFFVDM 468
           +H      E AL   V+M
Sbjct: 554 VHSNVELAEHALNKLVEM 571



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 178/341 (52%), Gaps = 26/341 (7%)

Query: 31  NIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           NI   +  + +++  Y +      ALN++  M  +GS  +  TI ++L ACA +     G
Sbjct: 216 NIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQG 275

Query: 91  KEIHGFAIKN----------GLDGDAYVSNALIQMYSECGSLVSARYLFDEMP--NRDVV 138
            EIH +++KN          G D D  V NALI MYS+C S  +AR +FD++P   R+VV
Sbjct: 276 MEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVV 335

Query: 139 SWSTMIRGYHRGGLPEEALEVMREM--RFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           +W+ MI G+ + G   +AL++  EM      + P+   +  ++   A +A + +GK IHA
Sbjct: 336 TWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHA 395

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
            V+R+ + +     +A  LI+MYSKCG++  A+ +F+ ++Q S +SWT M++GY      
Sbjct: 396 YVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRG 455

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL------ 310
           +E + +F +M +    P +IT L ++  C   G +  G    +Y      ++ L      
Sbjct: 456 SEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGL---SYFDSMSADYGLTPRAEH 512

Query: 311 -AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
            A A  L+  +G  R  ++ +T+ D       ++W A++SA
Sbjct: 513 YAYAIDLLARFG--RLDKAWKTVKDMPMEPTAVVWVALLSA 551


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 217/651 (33%), Positives = 342/651 (52%), Gaps = 27/651 (4%)

Query: 2   KIKNGFLNLEQTRQCHAHIIKTHFKFSYTN---------IINPLTRYNS-----LVTSYI 47
           K  +GFL   +    H+ ++  H   +Y+          + + +++ N+     L+    
Sbjct: 88  KTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLA 147

Query: 48  KNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAY 107
           +N         +  M+  G   D F    IL+ C  +    LG  +H   +  G     +
Sbjct: 148 ENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTF 207

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           VS AL+ MY++   +  +  +F+ M   +VVSW+ MI G+    L  +A ++   M    
Sbjct: 208 VSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEG 267

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
           + P     I +      + DV+  K +    +    D      + TALIDM SKCG+L  
Sbjct: 268 VTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSN--TLVGTALIDMNSKCGSLQE 325

Query: 228 AKQLFN------RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
           A+ +FN      R N      W  MISGY+R     + + LFA+M + +++    T  S+
Sbjct: 326 ARSIFNSHFITCRFN----APWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSV 381

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFS-LAMANALVDMYGKCREIRSARTLFDGMKSKD 340
                 +  L LGK +HA  +++G E + ++++NA+ + Y KC  +   R +F+ M+ +D
Sbjct: 382 FNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRD 441

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           ++ W ++++AY+Q    DKA E+F +M+   + PN+ T   +L  C     LE G+ +H 
Sbjct: 442 LISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHG 501

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
            I K GL++D  +++ALVDMYAKCG +  A ++F+     D   W A++AG+  HG  ++
Sbjct: 502 IICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDD 561

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           AL  F  M + GV+PN +TF+ +L ACSH GLV EG   F  M    GLVP++EHY C+V
Sbjct: 562 ALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIV 621

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYG 580
           DLL R G L++A E I  MP+ PN +VW  LL A ++H N  +GE+AA +IL  + +N  
Sbjct: 622 DLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSA 681

Query: 581 YNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             VL+SN Y  +  + D   +R VMKE  VKKEPG S + VNG +HKF  G
Sbjct: 682 TYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVNGTLHKFYAG 732



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 190/394 (48%), Gaps = 6/394 (1%)

Query: 166 MDIRPSEVAMISMVSLFADVADVDL---GKAIHACVVRNCKDEKLGVAIATALIDMYSKC 222
           +D   S + +  +V L  D  D       K +H  ++++       + +   +   YSKC
Sbjct: 59  VDKTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKC 118

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI 282
            ++  A +LF++++Q +  SWTV+I+G        +G   F EM  + +FP +     ++
Sbjct: 119 SDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGIL 178

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
             C  +  ++LG  +HA I+  GF     ++ AL++MY K +EI  +  +F+ M   +V+
Sbjct: 179 QICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVV 238

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
            WNA+I+ +        AF+LF+ M    V P+  T +G+         +   K +  Y 
Sbjct: 239 SWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYA 298

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY--RDICMWNAMMAGYGMHGCGEE 460
            + G++ + ++ TAL+DM +KCG +  A  +F+      R    WNAM++GY   G  E+
Sbjct: 299 LELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEK 358

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           AL  F  M ++ +  +  T+  + NA +    ++ GK V  + +     V  +     + 
Sbjct: 359 ALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVA 418

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +   + G L++  ++   M  R ++I W +L+ A
Sbjct: 419 NAYAKCGSLEDVRKVFNRMEDR-DLISWTSLVTA 451


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/593 (33%), Positives = 327/593 (55%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+++Y+KN++   A+ ++  M  +G +   F    ++ AC        G+++H   +
Sbjct: 170 WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVV 229

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G D D + +NAL+ MY + G +  A  +F++MP+ DVVSW+ +I G    G    A+E
Sbjct: 230 RMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIE 289

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++ +M++  + P+   + S++   +     DLG+ IH  +++   D      I   L+DM
Sbjct: 290 LLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSD--DYIGVGLVDM 347

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K   L  A+++F+ +    ++    +ISG       +E + LF E+ +E +  +  T+
Sbjct: 348 YAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTL 407

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            +++     +      + +HA  ++ GF F   + N L+D Y KC  +  A  +F+   S
Sbjct: 408 AAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSS 467

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D++   ++I+A +Q    + A +LF+ M    + P+   +  LL+ C    A E GK +
Sbjct: 468 GDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 527

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ K+    D     ALV  YAKCG +  A   FS    R +  W+AM+ G   HG G
Sbjct: 528 HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHG 587

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           + AL  F  M   G+ PN IT   +L AC+HAGLV E K  F+ M    G+    EHY C
Sbjct: 588 KRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSC 647

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           M+DLLGRAG LD+A E++ SMP + N  +WGALL AS++HK+P +G++AA ++  +EP+ 
Sbjct: 648 MIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEK 707

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            G +VL++N YA A  WN+VA VR++MK+  +KKEP  S +EV   VH FI G
Sbjct: 708 SGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVG 760



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/532 (28%), Positives = 256/532 (48%), Gaps = 9/532 (1%)

Query: 29  YTNIINPL-TRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  I +P    ++SLVT+Y  N  P SA+  +  MR  G   + F +P +LK    V   
Sbjct: 60  FDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDA 116

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN-RDVVSWSTMIRG 146
            LG ++H  A+  G   D +V+NAL+ MY   G +  AR +F+E  + R+ VSW+ ++  
Sbjct: 117 RLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           Y +     +A++V  EM +  I+P+E     +V+      +++ G+ +HA VVR   D+ 
Sbjct: 177 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKD 236

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
             V  A AL+DMY K G +  A  +F ++  + VVSW  +ISG +     +  + L  +M
Sbjct: 237 --VFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
               + P+  T+ S++  C   G   LG+ +H ++++   +    +   LVDMY K   +
Sbjct: 295 KYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             AR +FD M  +D+++ NA+IS  +     D+A  LF  ++   +  N  T+  +L   
Sbjct: 355 DDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKST 414

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
               A    + +H    K G   D  +   L+D Y KC  ++ A R+F E    DI    
Sbjct: 415 ASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACT 474

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           +M+        GE A+  F++M R G++P+      LLNAC+      +GK V   ++  
Sbjct: 475 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             +         +V    + G +++A     S+P R  ++ W A++     H
Sbjct: 535 QFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLPER-GVVSWSAMIGGLAQH 584



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 214/408 (52%), Gaps = 10/408 (2%)

Query: 80  ACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVS 139
           A AQ L+   G  +H   +K+G    A   N LI  YS+C     AR  FDE+P+   VS
Sbjct: 15  AAAQALLP--GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFFDEIPDPCHVS 70

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           WS+++  Y   GLP  A++    MR   +  +E A+  ++     V D  LG  +HA  +
Sbjct: 71  WSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHAMAM 127

Query: 200 RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINE 258
                    V +A AL+ MY   G +  A+++FN  + + + VSW  ++S Y++ ++  +
Sbjct: 128 ATGFGSD--VFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGD 185

Query: 259 GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
            +++F EM+   + P+E     ++  C     ++ G+ +HA ++R G++  +  ANALVD
Sbjct: 186 AIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVD 245

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
           MY K   +  A  +F+ M   DV+ WNA+IS         +A EL + MK S + PN  T
Sbjct: 246 MYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFT 305

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
           +  +L  C+ AGA ++G+ +H ++ K   + D  +   LVDMYAK   ++ A ++F    
Sbjct: 306 LSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMF 365

Query: 439 YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           +RD+ + NA+++G    G  +EAL  F ++ + G+  N  T   +L +
Sbjct: 366 HRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 215/649 (33%), Positives = 347/649 (53%), Gaps = 28/649 (4%)

Query: 7   FLNLEQTRQCHAHIIKTHFKFS---YTNIIN---------------------PLTRYNSL 42
           F +L+  ++ H H++K++++ S     ++IN                      +  + S+
Sbjct: 172 FRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSM 231

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           ++ Y +N + + A+ +Y  M ++G   D  T  +++KAC       LG+++H   IK+  
Sbjct: 232 ISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWF 291

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
                  NALI MY+  G +  A  +F  +P +D++SW TMI GY + G   EAL + R+
Sbjct: 292 GHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRD 351

Query: 163 M-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
           + R    +P+E    S+ S  + + +++ GK +H   V+     +  V    +L DMY+K
Sbjct: 352 LLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVK--FGLRRNVFAGCSLCDMYAK 409

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
            G L  AK  F ++    +VSW  +I+ +    + NE +  F +MI   + P  IT +SL
Sbjct: 410 FGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISL 469

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF-DGMKSKD 340
           +  CG    L  G+ +H+YI++ GF+  + + N+L+ MY KC  +  A  +F D  ++ +
Sbjct: 470 LCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNAN 529

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           ++ WNA++SA  Q     + F L+  M  S  +P+ +T+  LL  C E  +L +G  +H 
Sbjct: 530 LVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHC 589

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
           Y  K GL +DV +   L+DMYAKCG +  A  +F      DI  W++++ GY   G G E
Sbjct: 590 YSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHE 649

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           AL  F  M   GV+PN +T++G L+ACSH GLV EG  ++  M    G+ P  EH+ C+V
Sbjct: 650 ALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIV 709

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYG 580
           DLL RAG L EA   I+   L  ++  W  LLAA K H N  + E  A  IL+++P N  
Sbjct: 710 DLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSA 769

Query: 581 YNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
             V++ NI+A A  W +VA +R++MK++ V+K PG S +EV    H F 
Sbjct: 770 AMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFF 818



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 143/517 (27%), Positives = 254/517 (49%), Gaps = 9/517 (1%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNG-SEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           NS +    K +    AL  + F  KN  S  +  T  +++ ACA        K+IH   +
Sbjct: 127 NSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYTSLVLACANFRSLDYAKKIHDHVL 186

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+       + N +I MY +CGS+  AR +FD M   +VVSW++MI GY + G   +A+ 
Sbjct: 187 KSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDAII 246

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M      P ++   S++       D+DLG+ +HA V+++     L      ALI M
Sbjct: 247 MYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHL--TSQNALISM 304

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF-PSEIT 277
           Y+  G + +A  +F R+    ++SW  MI+GYI+     E + LF +++ +  + P+E  
Sbjct: 305 YTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFI 364

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             S+   C  +  L+ GK +H   ++ G   ++    +L DMY K   + SA+  F  +K
Sbjct: 365 FGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIK 424

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           + D++ WNA+I+A+A     ++A + F  M    + P+ +T + LL  C     L  G+ 
Sbjct: 425 NPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQ 484

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR--DICMWNAMMAGYGMH 455
           +H+YI K G + ++ +  +L+ MY KC  ++ A  +F + I R  ++  WNA+++     
Sbjct: 485 IHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRD-ISRNANLVSWNAILSACLQK 543

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
               E    + +M  SG KP+ IT   LL  C+    +  G  V    +   GL+  +  
Sbjct: 544 KQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKS-GLILDVSV 602

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
              ++D+  + G L  A ++  S     +++ W +L+
Sbjct: 603 CNGLIDMYAKCGSLKHARDVFDSTQ-NLDIVSWSSLI 638



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 144/283 (50%), Gaps = 5/283 (1%)

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           PS  T  SL++ C     L   K +H ++L++ ++ S+ + N +++MYGKC  ++ AR +
Sbjct: 159 PSTYT--SLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKV 216

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FD M+  +V+ W ++IS Y+Q    + A  ++I M  S   P+++T   ++  C  AG +
Sbjct: 217 FDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDI 276

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           ++G+ LH ++ K      +  + AL+ MY   G +  A  +F+    +D+  W  M+ GY
Sbjct: 277 DLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGY 336

Query: 453 GMHGCGEEALIFFVDMERSGV-KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
              G   EAL  F D+ R G  +PN   F  + +ACS    +  GK V   M    GL  
Sbjct: 337 IQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQV-HGMCVKFGLRR 395

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            +     + D+  + G L  A +M       P+++ W A++AA
Sbjct: 396 NVFAGCSLCDMYAKFGFLPSA-KMAFCQIKNPDIVSWNAIIAA 437


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 195/590 (33%), Positives = 323/590 (54%), Gaps = 2/590 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++++Y  + +   A  I+  M++ G   D  T  +IL AC        GK +     
Sbjct: 229 WNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESIS 288

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +   + D +V  ALI MY+ C S   A  +F  M   ++++WS +I  +   G   EAL 
Sbjct: 289 ETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALR 348

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             R M+   I P+ V  IS+++ F   + ++    IH  +  +  D+     +  AL+++
Sbjct: 349 YFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDT--TTMRNALVNV 406

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y +C +   A+ +F++L   +++SW  MI  Y++C   ++ ++LF  M ++ + P  +  
Sbjct: 407 YGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNF 466

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           ++++  C      +  K +H  +  +G   S  +  +LV+MY K  E+  A  +   M  
Sbjct: 467 MTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDE 526

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           + +  WN +I+ YA      +A E +  +++  +  ++VT + +L+ CT + +L  GK +
Sbjct: 527 QQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMI 586

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H+   + GL+ DVI+K AL +MY+KCG +  A R+F     R    WN M+  Y  HG  
Sbjct: 587 HSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGES 646

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           EE L     ME+ GVK NGITF+ +L++CSHAGL+ EG   F  + H  G+  K EHYGC
Sbjct: 647 EEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGC 706

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VDLLGRAG L EA + I  MPL P ++ W +LL A ++ K+   G++AA ++LE++P N
Sbjct: 707 LVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGN 766

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
              +V++SNIY+    W + A +RR M   RVKK PG SS++V   VH+F
Sbjct: 767 SSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEF 816



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 153/545 (28%), Positives = 277/545 (50%), Gaps = 20/545 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++++Y        AL ++  M   G   +  T+  +L +C        G  +H  ++
Sbjct: 26  WNVMISAYSSYKSFQEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILVHALSL 85

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH-RGGLPEEAL 157
           + G   +  V+ AL+ MY +CG+L+ A+ +F+EM  ++VV+W+ M+  Y  +G   + A+
Sbjct: 86  ERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGCCWKLAV 145

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           E+   M    ++ + +  +++++   D   +  GK IH+CV  +  +  L V + TAL++
Sbjct: 146 ELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRES--EHSLDVFVNTALVN 203

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
            Y+KCG+L  A+++F+ +   SV +W  MIS Y       E   +F  M +E      +T
Sbjct: 204 TYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVT 263

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
            LS++  C     LQ GK +   I    FE  L +  AL+ MY +CR    A  +F  MK
Sbjct: 264 FLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMK 323

Query: 338 SKDVMIWNAVISAYA-QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             +++ W+A+I+A+A   HC  +A   F  M+   + PN VT + LL+  T    LE   
Sbjct: 324 QTNLITWSAIITAFADHGHC-GEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELS 382

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H  I + GL+    ++ ALV++Y +C   + A  +F +    ++  WN+M+  Y    
Sbjct: 383 RIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCE 442

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH------GLGLV 510
             ++AL  F  M++ G++P+ + F+ +L AC+   + + G++   K+VH      GLG  
Sbjct: 443 RHDDALQLFRTMQQQGIQPDRVNFMTILGACT---IGSHGRT--RKLVHQCVEESGLGGS 497

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           P ++    +V++  +AG LD A  +++ M     +  W  L+    LH   S   + A Q
Sbjct: 498 PLVQ--TSLVNMYAKAGELDVAEVILQEMD-EQQITAWNVLINGYALHGR-SREALEAYQ 553

Query: 571 ILEIE 575
            L++E
Sbjct: 554 KLQLE 558



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/442 (30%), Positives = 227/442 (51%), Gaps = 11/442 (2%)

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           MYS CGSL  A   F ++  R+VVSW+ MI  Y      +EAL +   M    + P+ + 
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
           ++++++      ++  G  +HA  +   +       +ATAL++MY KCG L  A+ +F  
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLE--RGFFQNTLVATALLNMYGKCGTLLDAQSVFEE 118

Query: 235 LNQNSVVSWTVMISGYIR---CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL 291
           + + +VV+W  M+  Y     C ++   V LF  M+ E V  + IT L+++        L
Sbjct: 119 MAEKNVVTWNAMLGVYSLQGCCWKL--AVELFTRMLLEGVKANVITFLNVLNSVVDPDAL 176

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
           + GK++H+ +  +     + +  ALV+ Y KC  +  AR +FDGM  + V  WN++ISAY
Sbjct: 177 RKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAY 236

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
           + +    +AF +F  M+    R + VT + +L  C     L+ GK +   I +   E+D+
Sbjct: 237 SISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDL 296

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
            + TAL+ MYA+C     A ++F      ++  W+A++  +  HG   EAL +F  M++ 
Sbjct: 297 FVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQE 356

Query: 472 GVKPNGITFIGLLNA-CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
           G+ PN +TFI LLN   + +GL  E  S    ++   GL         +V++ GR    D
Sbjct: 357 GILPNRVTFISLLNGFTTPSGL--EELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPD 414

Query: 531 EAHEMIKSMPLRPNMIVWGALL 552
           +A  +   + L PN+I W +++
Sbjct: 415 DARTVFDQLEL-PNLISWNSMI 435



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 183/342 (53%), Gaps = 3/342 (0%)

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYS+CG+L  A   F ++   +VVSW VMIS Y       E + LF  M+ E V P+ IT
Sbjct: 1   MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           +++++  CG    L+ G  +HA  L  GF  +  +A AL++MYGKC  +  A+++F+ M 
Sbjct: 61  LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120

Query: 338 SKDVMIWNAVISAYA-QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
            K+V+ WNA++  Y+ Q  C   A ELF  M +  V+ N +T + +L+   +  AL  GK
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
           ++H+ + +    +DV + TALV+ Y KCG +  A ++F     R +  WN+M++ Y +  
Sbjct: 181 FIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISE 240

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
              EA   F  M++ G + + +TF+ +L+AC +   +  GK V +  +        +   
Sbjct: 241 RSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRES-ISETSFELDLFVG 299

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             ++ +  R    ++A ++   M  + N+I W A++ A   H
Sbjct: 300 TALITMYARCRSPEDAAQVFGRMK-QTNLITWSAIITAFADH 340



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 154/317 (48%), Gaps = 4/317 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NS++  Y++  +   AL ++  M++ G + D     TIL AC         K +H 
Sbjct: 428 LISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQ 487

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              ++GL G   V  +L+ MY++ G L  A  +  EM  + + +W+ +I GY   G   E
Sbjct: 488 CVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSRE 547

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           ALE  ++++   I   +V  IS+++       +  GK IH+  V    D    V +  AL
Sbjct: 548 ALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSD--VIVKNAL 605

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
            +MYSKCG++  A+++F+ +   S VSW  M+  Y +  E  E ++L  +M +E V  + 
Sbjct: 606 TNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNG 665

Query: 276 ITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           IT +S++  C   G +  G ++ H+     G E        LVD+ G+  +++ A     
Sbjct: 666 ITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYIS 725

Query: 335 GMK-SKDVMIWNAVISA 350
            M     ++ W +++ A
Sbjct: 726 KMPLEPGIVTWASLLGA 742



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 118/238 (49%), Gaps = 10/238 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +T +N L+  Y  + +   AL  Y  ++     VD  T  ++L AC        GK IH 
Sbjct: 529 ITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHS 588

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A++ GLD D  V NAL  MYS+CGS+ +AR +FD MP R  VSW+ M++ Y + G  EE
Sbjct: 589 NAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEE 648

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT-- 213
            L+++R+M    ++ + +  +S++S  +       G     C   +      G+ + T  
Sbjct: 649 VLKLIRKMEQEGVKLNGITFVSVLSSCSHA-----GLIAEGCQYFHSLGHDRGIEVKTEH 703

Query: 214 --ALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
              L+D+  + G L  A++  +++  +  +V+W  ++       +++ G     +++E
Sbjct: 704 YGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLE 761


>gi|15231798|ref|NP_190904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174119|sp|Q9LFI1.1|PP280_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53360, mitochondrial; Flags: Precursor
 gi|6729487|emb|CAB67643.1| putative protein [Arabidopsis thaliana]
 gi|332645554|gb|AEE79075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 221/650 (34%), Positives = 341/650 (52%), Gaps = 34/650 (5%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTNIINP--------------------------LTRYNSL 42
           +L Q R+ H HI+ ++ K  Y  I+N                           L  Y S+
Sbjct: 82  SLAQGRKIHDHILNSNCK--YDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSV 139

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           +T Y +N + + A+ +Y  M +     D F   +I+KACA      LGK++H   IK   
Sbjct: 140 ITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES 199

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
                  NALI MY     +  A  +F  +P +D++SWS++I G+ + G   EAL  ++E
Sbjct: 200 SSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKE 259

Query: 163 M-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA-TALIDMYS 220
           M  F    P+E    S +   + +   D G  IH   +   K E  G AIA  +L DMY+
Sbjct: 260 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCI---KSELAGNAIAGCSLCDMYA 316

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           +CG L  A+++F+++ +    SW V+I+G       +E V +F++M      P  I++ S
Sbjct: 317 RCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRS 376

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK- 339
           L+        L  G  +H+YI++ GF   L + N+L+ MY  C ++     LF+  ++  
Sbjct: 377 LLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNA 436

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           D + WN +++A  Q     +   LF  M VS+  P+ +TM  LL  C E  +L++G  +H
Sbjct: 437 DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH 496

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
            Y  K GL  +  +K  L+DMYAKCG +  A R+F     RD+  W+ ++ GY   G GE
Sbjct: 497 CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGE 556

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           EALI F +M+ +G++PN +TF+G+L ACSH GLV EG  ++  M    G+ P  EH  C+
Sbjct: 557 EALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCV 616

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNY 579
           VDLL RAG L+EA   I  M L P+++VW  LL+A K   N  + + AA  IL+I+P N 
Sbjct: 617 VDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNS 676

Query: 580 GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
             +VL+ +++A +  W + A +R  MK+  VKK PG S +E+   +H F 
Sbjct: 677 TAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFF 726



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 251/518 (48%), Gaps = 11/518 (2%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           N  + S  K+N    AL  + F +KN S ++   T  +++ AC+       G++IH   +
Sbjct: 35  NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +    D  ++N ++ MY +CGSL  AR +FD MP R++VS++++I GY + G   EA+ 
Sbjct: 95  NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M   D+ P + A  S++   A  +DV LGK +HA V++   +    +    ALI M
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIK--LESSSHLIAQNALIAM 212

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF-PSEIT 277
           Y +   ++ A ++F  +    ++SW+ +I+G+ +     E +    EM+   VF P+E  
Sbjct: 213 YVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 272

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             S +  C  +     G  +H   +++    +     +L DMY +C  + SAR +FD ++
Sbjct: 273 FGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE 332

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
             D   WN +I+  A     D+A  +F  M+ S   P+ +++  LL   T+  AL  G  
Sbjct: 333 RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQ 392

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR---DICMWNAMMAGYGM 454
           +H+YI K G   D+ +  +L+ MY  C D+   + LF +  +R   D   WN ++     
Sbjct: 393 IHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFED--FRNNADSVSWNTILTACLQ 450

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           H    E L  F  M  S  +P+ IT   LL  C     +  G  V    +   GL P+  
Sbjct: 451 HEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLK-TGLAPEQF 509

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
               ++D+  + G L +A  +  SM  R +++ W  L+
Sbjct: 510 IKNGLIDMYAKCGSLGQARRIFDSMDNR-DVVSWSTLI 546



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/459 (25%), Positives = 214/459 (46%), Gaps = 22/459 (4%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           VSN+ I   S   S +    L ++  N      S     ++R  L  EA +  ++     
Sbjct: 13  VSNSQILATSSVVSTIKTEELMNDHIN------SLCKSNFYREAL--EAFDFAQKNSSFK 64

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALIDMYSKCGNLA 226
           IR      IS++   +    +  G+ IH  ++  NCK + +   +   ++ MY KCG+L 
Sbjct: 65  IRLR--TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTI---LNNHILSMYGKCGSLR 119

Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
            A+++F+ + + ++VS+T +I+GY +  +  E +RL+ +M++E++ P +    S+I  C 
Sbjct: 120 DAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACA 179

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
               + LGK LHA +++      L   NAL+ MY +  ++  A  +F G+  KD++ W++
Sbjct: 180 SSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSS 239

Query: 347 VISAYAQAHCIDKAFELFIHMK----VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
           +I+ ++Q   +   FE   H+K         PNE      L  C+     + G  +H   
Sbjct: 240 IIAGFSQ---LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLC 296

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
            K  L  + I   +L DMYA+CG +N A R+F +    D   WN ++AG   +G  +EA+
Sbjct: 297 IKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAV 356

Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDL 522
             F  M  SG  P+ I+   LL A +    +++G  +   ++   G +  +     ++ +
Sbjct: 357 SVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLADLTVCNSLLTM 415

Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
                 L     + +      + + W  +L A   H+ P
Sbjct: 416 YTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQP 454


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/630 (32%), Positives = 345/630 (54%), Gaps = 18/630 (2%)

Query: 21  IKTHFKFSYTNIINPLTRYNSL-VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILK 79
           +K  F     N+ + +   N++   +  +       + +Y+ + + G E++     + LK
Sbjct: 95  VKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLK 154

Query: 80  ACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVS 139
               +    +   +H   +K G D +A+V  ALI  YS CGS+ SAR +F+ +  +D+V 
Sbjct: 155 LFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVV 214

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           W+ ++  Y   G  E++L+++  MR     P+     + +     +   D  K +H  ++
Sbjct: 215 WAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQIL 274

Query: 200 RNCK--DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN 257
           + C   D ++GV     L+ +Y++ G+++ A ++FN + +N VV W+ MI+ + +    N
Sbjct: 275 KTCYVLDPRVGVG----LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN 330

Query: 258 EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALV 317
           E V LF  M E  V P+E T+ S++  C       LG+ LH  +++ GF+  + ++NAL+
Sbjct: 331 EAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALI 390

Query: 318 DMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEV 377
           D+Y KC ++ +A  LF  + SK+ + WN VI  Y       KAF +F     ++V   EV
Sbjct: 391 DVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEV 450

Query: 378 TMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
           T    L  C    ++++G  +H    K      V +  +L+DMYAKCGD+  A  +F+E 
Sbjct: 451 TFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM 510

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
              D+  WNA+++GY  HG G +AL     M+    KPNG+TF+G+L+ CS+AGL+ +G+
Sbjct: 511 ETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQ 570

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
             F+ M+   G+ P +EHY CMV LLGR+G LD+A ++I+ +P  P++++W A+L+AS  
Sbjct: 571 ECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMN 630

Query: 558 HKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
             N      +A +IL+I P++    VL+SN+YA A +W +VA +R+ MKE+ VKKEPG S
Sbjct: 631 QNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLS 690

Query: 618 SVEVNGLVHKFIRG-----------GMVNW 636
            +E  G VH F  G           GM+ W
Sbjct: 691 WIEHQGDVHYFSVGLSDHPDMKLINGMLEW 720



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/494 (25%), Positives = 228/494 (46%), Gaps = 16/494 (3%)

Query: 69  VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYL 128
           +D+     +L+ C Q       K IH   +K G   D + +N L+  Y + G    A  L
Sbjct: 47  LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106

Query: 129 FDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV 188
           FDEMP R+ VS+ T+ +GY           + RE    ++ P      S + LF  +   
Sbjct: 107 FDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGH--ELNPH--VFTSFLKLFVSLDKA 162

Query: 189 DLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
           ++   +H+ +V+   D      +  ALI+ YS CG++  A+ +F  +    +V W  ++S
Sbjct: 163 EICPWLHSPIVKLGYDSN--AFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVS 220

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
            Y+      + ++L + M      P+  T  + +     +G     K +H  IL+  +  
Sbjct: 221 CYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVL 280

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
              +   L+ +Y +  ++  A  +F+ M   DV+ W+ +I+ + Q    ++A +LFI M+
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMR 340

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
            + V PNE T+  +L+ C       +G+ LH  + K G ++D+ +  AL+D+YAKC  ++
Sbjct: 341 EAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMD 400

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A +LF+E   ++   WN ++ GY   G G +A   F +  R+ V    +TF   L AC+
Sbjct: 401 TAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA 460

Query: 489 HAGLVTEGKSVFDKMVHGLGL----VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
               +  G       VHGL +      K+     ++D+  + G +  A  +   M    +
Sbjct: 461 SLASMDLGVQ-----VHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-TID 514

Query: 545 MIVWGALLAASKLH 558
           +  W AL++    H
Sbjct: 515 VASWNALISGYSTH 528


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/593 (33%), Positives = 327/593 (55%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+++Y+KN++   A+ ++  M  +G +   F    ++ AC        G+++H   +
Sbjct: 170 WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVV 229

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G D D + +NAL+ MY + G +  A  +F++MP+ DVVSW+ +I G    G    A+E
Sbjct: 230 RMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIE 289

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++ +M++  + P+   + S++   +     DLG+ IH  +++   D      I   L+DM
Sbjct: 290 LLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSD--DYIGVGLVDM 347

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K   L  A+++F+ +    ++    +ISG       +E + LF E+ +E +  +  T+
Sbjct: 348 YAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTL 407

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            +++     +      + +HA  ++ GF F   + N L+D Y KC  +  A  +F+   S
Sbjct: 408 AAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSS 467

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D++   ++I+A +Q    + A +LF+ M    + P+   +  LL+ C    A E GK +
Sbjct: 468 GDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 527

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ K+    D     ALV  YAKCG +  A   FS    R +  W+AM+ G   HG G
Sbjct: 528 HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHG 587

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           + AL  F  M   G+ PN IT   +L AC+HAGLV E K  F+ M    G+    EHY C
Sbjct: 588 KRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSC 647

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           M+DLLGRAG LD+A E++ SMP + N  +WGALL AS++HK+P +G++AA ++  +EP+ 
Sbjct: 648 MIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEK 707

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            G +VL++N YA A  WN+VA VR++MK+  +KKEP  S +EV   VH FI G
Sbjct: 708 SGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMSWIEVKDKVHTFIVG 760



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/532 (28%), Positives = 256/532 (48%), Gaps = 9/532 (1%)

Query: 29  YTNIINPL-TRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  I +P    ++SLVT+Y  N  P SA+  +  MR  G   + F +P +LK    V   
Sbjct: 60  FDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDA 116

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN-RDVVSWSTMIRG 146
            LG ++H  A+  G   D +V+NAL+ MY   G +  AR +F+E  + R+ VSW+ ++  
Sbjct: 117 RLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSA 176

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           Y +     +A++V  EM +  I+P+E     +V+      +++ G+ +HA VVR   D+ 
Sbjct: 177 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKD 236

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
             V  A AL+DMY K G +  A  +F ++  + VVSW  +ISG +     +  + L  +M
Sbjct: 237 --VFTANALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
               + P+  T+ S++  C   G   LG+ +H ++++   +    +   LVDMY K   +
Sbjct: 295 KYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             AR +FD M  +D+++ NA+IS  +     D+A  LF  ++   +  N  T+  +L   
Sbjct: 355 DDARKVFDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKST 414

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
               A    + +H    K G   D  +   L+D Y KC  ++ A R+F E    DI    
Sbjct: 415 ASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACT 474

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           +M+        GE A+  F++M R G++P+      LLNAC+      +GK V   ++  
Sbjct: 475 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             +         +V    + G +++A     S+P R  ++ W A++     H
Sbjct: 535 QFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLPER-GVVSWSAMIGGLAQH 584



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 215/408 (52%), Gaps = 10/408 (2%)

Query: 80  ACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVS 139
           A AQ L+   G  +H   +K+G    A   N LI  YS+C     AR +FDE+P+   VS
Sbjct: 15  AAAQALLP--GAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVFDEIPDPCHVS 70

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           WS+++  Y   GLP  A++    MR   +  +E A+  ++     V D  LG  +HA  +
Sbjct: 71  WSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDARLGAQVHAMAM 127

Query: 200 RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINE 258
                    V +A AL+ MY   G +  A+++FN  + + + VSW  ++S Y++ ++  +
Sbjct: 128 ATGFGSD--VFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGD 185

Query: 259 GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
            +++F EM+   + P+E     ++  C     ++ G+ +HA ++R G++  +  ANALVD
Sbjct: 186 AIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVD 245

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
           MY K   +  A  +F+ M   DV+ WNA+IS         +A EL + MK S + PN  T
Sbjct: 246 MYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFT 305

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
           +  +L  C+ AGA ++G+ +H ++ K   + D  +   LVDMYAK   ++ A ++F    
Sbjct: 306 LSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMF 365

Query: 439 YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           +RD+ + NA+++G    G  +EAL  F ++ + G+  N  T   +L +
Sbjct: 366 HRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKS 413


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 192/541 (35%), Positives = 306/541 (56%), Gaps = 4/541 (0%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           GK IH    ++    D +V+ AL+  Y++CGSL  AR +FD MP R V +W++MI  Y  
Sbjct: 29  GKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSI 88

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
                EA  + + M+    R   V  +S++    +  ++  GK +   +     +  L +
Sbjct: 89  SERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFE--LDL 146

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            + TALI MY++C +   A Q+F R+ Q ++++W+ +I+ +       E +R F  M +E
Sbjct: 147 FVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQQE 206

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR--EIR 327
            + P+ +T +SL+       GL+    +H  I  +G + +  M+NALV++YG+C   E+ 
Sbjct: 207 GILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGELD 266

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            A  +   M  + +  WN +I+ Y       +A E +  +++  +  ++VT + +L+ CT
Sbjct: 267 VAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACT 326

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
            + +L  GK +H+   + GL+ DVI+K AL +MY+KCG +  A R+F     R    WN 
Sbjct: 327 SSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNG 386

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           M+  Y  HG  EE L     ME+ GVK NGITF+ +L++CSHAGL+ EG   F  + H  
Sbjct: 387 MLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDR 446

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
           G+  K EHYGC+VDLLGRAG L EA + I  MP  P ++ W +LL A ++HK+   G++A
Sbjct: 447 GIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLA 506

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHK 627
           A ++LE++P N   +V++SNIY+    W + A +RR M   RVKK PG SS++V   VH+
Sbjct: 507 ARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHE 566

Query: 628 F 628
           F
Sbjct: 567 F 567



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 207/421 (49%), Gaps = 6/421 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++++Y  + +   A  I+  M+  G   D  T  +IL AC        GK +     
Sbjct: 79  WNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESIS 138

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +   + D +V  ALI MY+ C S  +A  +F  M  +++++WS +I  +   G   EAL 
Sbjct: 139 ETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALR 198

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             R M+   I P+ V  IS+++ F   + ++    IH  +  +  D+     ++ AL+++
Sbjct: 199 YFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDT--TTMSNALVNV 256

Query: 219 YSKC--GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           Y +C  G L  A+ +   +++  + +W V+I+GY       E +  +  +  E +   ++
Sbjct: 257 YGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKV 316

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T +S++  C     L  GK +H+  +  G +  + + NAL +MY KC  + +AR +FD M
Sbjct: 317 TFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSM 376

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG- 395
             +  + WN ++ AYAQ    ++  +L   M+   V+ N +T V +LS C+ AG +  G 
Sbjct: 377 PIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGC 436

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGM 454
           ++ H+    +G+EV       LVD+  + G +  A +  S+     +I  W +++    +
Sbjct: 437 QYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRV 496

Query: 455 H 455
           H
Sbjct: 497 H 497



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 112/217 (51%), Gaps = 10/217 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +T +N L+  Y  + +   AL  Y  ++     VD  T  ++L AC        GK IH 
Sbjct: 280 ITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHS 339

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A++ GLD D  V NAL  MYS+CGS+ +AR +FD MP R  VSW+ M++ Y + G  EE
Sbjct: 340 NAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEE 399

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT-- 213
            L+++R+M    ++ + +  +S++S  +    +  G     C   +      G+ + T  
Sbjct: 400 VLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEG-----CQYFHSLGHDRGIEVKTEH 454

Query: 214 --ALIDMYSKCGNLAYAKQLFNRL-NQNSVVSWTVMI 247
              L+D+  + G L  A++  +++ ++  +V+W  ++
Sbjct: 455 YGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLL 491


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/593 (33%), Positives = 329/593 (55%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+L+    +      A+ ++  M  +G E D+ T+ +++ AC+       G+++H +  
Sbjct: 317 YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT 376

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   +  +  AL+ +Y++C  + +A   F E    +VV W+ M+  Y        +  
Sbjct: 377 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 436

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R+M+  +I P++    S++     + D++LG+ IH+ +++   + +L   + + LIDM
Sbjct: 437 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT--NFQLNAYVCSVLIDM 494

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G L  A  +  R     VVSWT MI+GY + N  ++ +  F +M++  +   E+ +
Sbjct: 495 YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 554

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            + +  C  +  L+ G+ +HA    +GF   L   NALV +Y +C +I  +   F+  ++
Sbjct: 555 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 614

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D + WNA++S + Q+   ++A  +F+ M    +  N  T    +   +E   ++ GK +
Sbjct: 615 GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV 674

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I K G + +  +  AL+ MYAKCG ++ A + F E   ++   WNA++  Y  HG G
Sbjct: 675 HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFG 734

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F  M  S V+PN +T +G+L+ACSH GLV +G + F+ M    GL PK EHY C
Sbjct: 735 SEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVC 794

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VD+L RAGLL  A E I+ MP++P+ +VW  LL+A  +HKN  +GE AA  +LE+EP++
Sbjct: 795 VVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPED 854

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VL+SN+YAV+ +W+     R+ MKE  VKKEPG S +EV   +H F  G
Sbjct: 855 SATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 907



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 135/527 (25%), Positives = 255/527 (48%), Gaps = 13/527 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC-AQVLMTHLGKEIHGFA 97
           +N ++      N       ++  M       +  T   +L+AC    +   + ++IH   
Sbjct: 114 WNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARI 173

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +  GL     V N LI +YS  G +  AR +FD +  +D  SW  MI G  +     EA+
Sbjct: 174 LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAI 233

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IAT 213
            +  +M  + I P+  A  S++S    +  +++G+ +H  V+      KLG +    +  
Sbjct: 234 RLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL------KLGFSSDTYVCN 287

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+ +Y   GNL  A+ +F+ ++Q   V++  +I+G  +C    + + LF  M  + + P
Sbjct: 288 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 347

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T+ SL++ C   G L  G+ LHAY  + GF  +  +  AL+++Y KC +I +A   F
Sbjct: 348 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 407

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
              + ++V++WN ++ AY     +  +F +F  M++ ++ PN+ T   +L  C   G LE
Sbjct: 408 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 467

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           +G+ +H+ I K   +++  + + L+DMYAK G ++ A+ +      +D+  W  M+AGY 
Sbjct: 468 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 527

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +   ++AL  F  M   G++ + +     ++AC+    + EG+ +  +     G    +
Sbjct: 528 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDL 586

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
                +V L  R G ++E++   +      N I W AL++  +   N
Sbjct: 587 PFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGN 632



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 223/458 (48%), Gaps = 12/458 (2%)

Query: 2   KIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAF 61
           KI+   LNL    +C    I+T   +     +  +  +N ++ +Y   +   ++  I+  
Sbjct: 385 KIEGALLNL--YAKCAD--IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQ 440

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           M+      + +T P+ILK C ++    LG++IH   IK     +AYV + LI MY++ G 
Sbjct: 441 MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGK 500

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           L +A  +      +DVVSW+TMI GY +    ++AL   R+M    IR  EV + + VS 
Sbjct: 501 LDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 560

Query: 182 FADVADVDLGKAIH--ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
            A +  +  G+ IH  ACV     D    +    AL+ +YS+CG +  +   F +     
Sbjct: 561 CAGLQALKEGQQIHAQACVSGFSSD----LPFQNALVTLYSRCGKIEESYLAFEQTEAGD 616

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
            ++W  ++SG+ +     E +R+F  M  E +  +  T  S +        ++ GK +HA
Sbjct: 617 NIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHA 676

Query: 300 YILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
            I + G++    + NAL+ MY KC  I  A   F  + +K+ + WNA+I+AY++     +
Sbjct: 677 VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSE 736

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALV 418
           A + F  M  S VRPN VT+VG+LS C+  G ++ G  +  +   + GL         +V
Sbjct: 737 ALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVV 796

Query: 419 DMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
           DM  + G ++ A     E  I  D  +W  +++   +H
Sbjct: 797 DMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVH 834



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 226/469 (48%), Gaps = 11/469 (2%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G+++H   +K GLD +  +S  L   Y   G L  A  +FDEMP R + +W+ MI+    
Sbjct: 64  GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELAS 123

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMV-SLFADVADVDLGKAIHACVV-RNCKDEKL 207
             L  E   +   M   ++ P+E     ++ +        D+ + IHA ++ +  +D   
Sbjct: 124 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD--- 180

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
              +   LID+YS+ G +  A+++F+ L      SW  MISG  +     E +RLF +M 
Sbjct: 181 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 240

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
              + P+     S++  C  +  L++G+ LH  +L+ GF     + NALV +Y     + 
Sbjct: 241 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 300

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           SA  +F  M  +D + +N +I+  +Q    +KA ELF  M +  + P+  T+  L+  C+
Sbjct: 301 SAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 360

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
             G L  G+ LH Y  K G   +  ++ AL+++YAKC D+  A   F E    ++ +WN 
Sbjct: 361 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 420

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           M+  YG+      +   F  M+   + PN  T+  +L  C   G +  G+ +  +++   
Sbjct: 421 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK-- 478

Query: 508 GLVPKIEHYGC--MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
               ++  Y C  ++D+  + G LD A +++     + +++ W  ++A 
Sbjct: 479 -TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG 525



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 118/255 (46%), Gaps = 2/255 (0%)

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
           G L  G+ LH+ IL+ G + +  ++  L D Y    ++  A  +FD M  + +  WN +I
Sbjct: 59  GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 118

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG-ALEMGKWLHTYIEKQGL 407
              A  + I + F LF+ M    V PNE T  G+L  C     A ++ + +H  I  QGL
Sbjct: 119 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 178

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
               ++   L+D+Y++ G V+ A R+F     +D   W AM++G   + C  EA+  F D
Sbjct: 179 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 238

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           M   G+ P    F  +L+AC     +  G+ +   +V  LG          +V L    G
Sbjct: 239 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG-LVLKLGFSSDTYVCNALVSLYFHLG 297

Query: 528 LLDEAHEMIKSMPLR 542
            L  A  +  +M  R
Sbjct: 298 NLISAEHIFSNMSQR 312



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 97/220 (44%), Gaps = 8/220 (3%)

Query: 372 VRPNEVTMVGLLSLCTEA-GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
           +RPN  T+  LL  C +  G+L+ G+ LH+ I K GL+ +  L   L D Y   GD+ GA
Sbjct: 40  IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 99

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
           +++F E   R I  WN M+          E    FV M    V PN  TF G+L AC   
Sbjct: 100 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 159

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
            +  +        +   GL         ++DL  R G +D A  +   + L+ +   W A
Sbjct: 160 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHS-SWVA 218

Query: 551 LLAASKLHKNPSMGE----IAATQILEIEPQNYGYNVLMS 586
           ++  S L KN    E         +L I P  Y ++ ++S
Sbjct: 219 MI--SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLS 256


>gi|356497951|ref|XP_003517819.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Glycine max]
          Length = 828

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 202/601 (33%), Positives = 338/601 (56%), Gaps = 7/601 (1%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  ++S+V  Y++N +P   L +  +M   G   D+ T+ ++ +AC +V    L K 
Sbjct: 165 VRDLVSWSSVVACYVENGRPREGLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKS 224

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HG+ I+  + GDA + N+LI MY +C  L  A+ +F+ + +     W++MI   ++ G 
Sbjct: 225 VHGYVIRKEMAGDASLRNSLIVMYGQCSYLRGAKGMFESVSDPSTACWTSMISSCNQNGC 284

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            EEA++  ++M+  ++  + V MIS++   A +  +  GK++H  ++R   D    + + 
Sbjct: 285 FEEAIDAFKKMQESEVEVNAVTMISVLCCCARLGWLKEGKSVHCFILRREMDGA-DLDLG 343

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            AL+D Y+ C  ++  ++L   +  +SVVSW  +IS Y R     E + LF  M+E+ + 
Sbjct: 344 PALMDFYAACWKISSCEKLLCLIGNSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLM 403

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGF--EFSLAMANALVDMYGKCREIRSAR 330
           P   ++ S I  C     ++ G+ +H ++ + GF  EF   + N+L+DMY KC  +  A 
Sbjct: 404 PDSFSLASSISACAGASSVRFGQQIHGHVTKRGFADEF---VQNSLMDMYSKCGFVDLAY 460

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
           T+FD +  K ++ WN +I  ++Q     +A +LF  M  + +  NEVT +  +  C+ +G
Sbjct: 461 TIFDKIWEKSIVTWNCMICGFSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSG 520

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
            L  GKW+H  +   G++ D+ + TALVDMYAKCGD+  A  +F+    + +  W+AM+A
Sbjct: 521 YLLKGKWIHHKLVVSGVQKDLYIDTALVDMYAKCGDLKTAQGVFNSMPEKSVVSWSAMIA 580

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
            YG+HG    A   F  M  S +KPN +TF+ +L+AC HAG V EGK  F+ M    G+V
Sbjct: 581 AYGIHGQITAATTLFTKMVESHIKPNEVTFMNILSACRHAGSVEEGKFYFNSM-RDYGIV 639

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           P  EH+  +VDLL RAG +D A+E+IKS     +  +WGALL   ++H    +      +
Sbjct: 640 PNAEHFASIVDLLSRAGDIDGAYEIIKSTCQHIDASIWGALLNGCRIHGRMDLIHNIHKE 699

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIR 630
           + EI   + GY  L+SNIYA    W +   VR  M+ + +KK PG+SS+E++  +++F  
Sbjct: 700 LREIRTNDTGYYTLLSNIYAEGGNWYESRKVRSRMEGMGLKKVPGYSSIEIDDKIYRFGA 759

Query: 631 G 631
           G
Sbjct: 760 G 760



 Score =  267 bits (683), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/557 (29%), Positives = 294/557 (52%), Gaps = 17/557 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN---FTIPTILKACAQVLMTHLGKEIHG 95
           +  L+  Y+ ++     +++Y    + GS +     F  P+++KA + V    +G+++HG
Sbjct: 67  FGVLIKCYLWHHLFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHG 126

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K GL  D  +  +L+ MY E G L  AR +FDE+  RD+VSWS+++  Y   G P E
Sbjct: 127 RIVKTGLGTDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPRE 186

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            LE++R M    + P  V M+S+      V  + L K++H  V+R  K+     ++  +L
Sbjct: 187 GLEMLRWMVSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIR--KEMAGDASLRNSL 244

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE---INEGVRLFAEMIEENVF 272
           I MY +C  L  AK +F  ++  S   WT MIS    CN+     E +  F +M E  V 
Sbjct: 245 IVMYGQCSYLRGAKGMFESVSDPSTACWTSMISS---CNQNGCFEEAIDAFKKMQESEVE 301

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS-LAMANALVDMYGKCREIRSART 331
            + +T++S++  C  +G L+ GK +H +ILR   + + L +  AL+D Y  C +I S   
Sbjct: 302 VNAVTMISVLCCCARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEK 361

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           L   + +  V+ WN +IS YA+    ++A  LF+ M    + P+  ++   +S C  A +
Sbjct: 362 LLCLIGNSSVVSWNTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASS 421

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           +  G+ +H ++ K+G   D  ++ +L+DMY+KCG V+ AY +F +   + I  WN M+ G
Sbjct: 422 VRFGQQIHGHVTKRGF-ADEFVQNSLMDMYSKCGFVDLAYTIFDKIWEKSIVTWNCMICG 480

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           +  +G   EAL  F +M  + +  N +TF+  + ACS++G + +GK +  K+V   G+  
Sbjct: 481 FSQNGISVEALKLFDEMCFNCMDINEVTFLSAIQACSNSGYLLKGKWIHHKLVVS-GVQK 539

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
            +     +VD+  + G L  A  +  SMP   +++ W A++AA  +H   +      T++
Sbjct: 540 DLYIDTALVDMYAKCGDLKTAQGVFNSMP-EKSVVSWSAMIAAYGIHGQITAATTLFTKM 598

Query: 572 LE--IEPQNYGYNVLMS 586
           +E  I+P    +  ++S
Sbjct: 599 VESHIKPNEVTFMNILS 615



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/469 (26%), Positives = 234/469 (49%), Gaps = 13/469 (2%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           ++H   +  GL  D   S  L++ Y+  GSL S+R +F+  P+ D   +  +I+ Y    
Sbjct: 19  QLHAHLVVTGLHSDPLASTKLLESYARMGSLHSSRLVFETHPSPDSFMFGVLIKCYLWHH 78

Query: 152 LPEEALEVMREMRFMDIRPSEVAMI---SMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           L ++ + +         R ++       S++   + V  + +G+ +H  +V+      LG
Sbjct: 79  LFDQVVSLYHHHIQKGSRLTQNCTFLYPSVIKAISVVGGLVVGRKVHGRIVKT----GLG 134

Query: 209 V--AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
               I T+L+ MY + G L+ A+++F+ +    +VSW+ +++ Y+      EG+ +   M
Sbjct: 135 TDHVIGTSLLGMYGELGCLSDARKVFDEIRVRDLVSWSSVVACYVENGRPREGLEMLRWM 194

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
           + E V P  +T+LS+   CG VG L+L K +H Y++R       ++ N+L+ MYG+C  +
Sbjct: 195 VSEGVGPDSVTMLSVAEACGKVGCLRLAKSVHGYVIRKEMAGDASLRNSLIVMYGQCSYL 254

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
           R A+ +F+ +       W ++IS+  Q  C ++A + F  M+ S+V  N VTM+ +L  C
Sbjct: 255 RGAKGMFESVSDPSTACWTSMISSCNQNGCFEEAIDAFKKMQESEVEVNAVTMISVLCCC 314

Query: 387 TEAGALEMGKWLHTYIEKQGLE-VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
              G L+ GK +H +I ++ ++  D+ L  AL+D YA C  ++   +L        +  W
Sbjct: 315 ARLGWLKEGKSVHCFILRREMDGADLDLGPALMDFYAACWKISSCEKLLCLIGNSSVVSW 374

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           N +++ Y   G  EEA++ FV M   G+ P+  +    ++AC+ A  V  G+ +    V 
Sbjct: 375 NTLISIYAREGLNEEAMVLFVCMLEKGLMPDSFSLASSISACAGASSVRFGQQIHGH-VT 433

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
             G   +      M D+  + G +D A+ +   +    +++ W  ++  
Sbjct: 434 KRGFADEFVQNSLM-DMYSKCGFVDLAYTIFDKI-WEKSIVTWNCMICG 480


>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
 gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 691

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 210/616 (34%), Positives = 343/616 (55%), Gaps = 5/616 (0%)

Query: 16  CHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTI 74
           C  H    H  F   +I + +  +NSL++ Y KN+     L ++  +      V D+FT 
Sbjct: 52  CKDHCSARHV-FENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTF 110

Query: 75  PTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN 134
           P ++KA   +    LG+ IH   +K+G   D  V+++L+ MY++     ++  +FDEMP 
Sbjct: 111 PNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPE 170

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           RDV SW+T+I  +++ G  E+ALE+   M      P+ V++   +S  + +  ++ GK I
Sbjct: 171 RDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEI 230

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
           H   V+  K  +L   + +AL+DMY KC  L  A+++F ++ + S+V+W  MI GY+   
Sbjct: 231 HRKCVK--KGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKG 288

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
           +    V +   MI E   PS+ T+ S+++ C     L  GK++H Y++R+     + +  
Sbjct: 289 DSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNC 348

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
           +L+D+Y KC E   A T+F   +      WN +IS+Y       KA E++  M    V+P
Sbjct: 349 SLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKP 408

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           + VT   +L  C++  ALE GK +H  I +  LE D +L +AL+DMY+KCG+   A+R+F
Sbjct: 409 DVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIF 468

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
           +    +D+  W  M++ YG HG   EAL  F +M++ G+KP+G+T + +L+AC HAGL+ 
Sbjct: 469 NSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLID 528

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP-LRPNMIVWGALLA 553
           EG   F +M    G+ P IEHY CM+D+LGRAG L EA+E+I+  P    N  +   L +
Sbjct: 529 EGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFS 588

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           A  LH   S+G+  A  ++E  P +    +++ N+YA    W+    VR  MKE+ ++K+
Sbjct: 589 ACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKK 648

Query: 614 PGFSSVEVNGLVHKFI 629
           PG S +E++  V  F 
Sbjct: 649 PGCSWIEMSDKVCHFF 664



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 142/279 (50%), Gaps = 7/279 (2%)

Query: 278 ILSLIIEC-GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           +LSL+ EC      L+  K +H  IL  G    + +  +L+++Y  C++  SAR +F+  
Sbjct: 6   LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65

Query: 337 KSK-DVMIWNAVISAYAQAHCIDKAFELFIH-MKVSKVRPNEVTMVGLLSLCTEAGALEM 394
             + DV IWN+++S Y++        E+F   +  S   P+  T   ++      G   +
Sbjct: 66  DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFL 125

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G+ +HT + K G   DV++ ++LV MYAK      + ++F E   RD+  WN +++ +  
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVPKI 513
            G  E+AL  F  ME SG +PN ++    ++ACS    +  GK +  K V  G  L   +
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
                +VD+ G+   L+ A E+ + MP R +++ W +++
Sbjct: 246 N--SALVDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMI 281


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 205/602 (34%), Positives = 350/602 (58%), Gaps = 11/602 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSE---VDNFTIPTILKACAQVLMTHLGKE 92
           L  +NS++ + ++N     +  ++  +  NG E    D  T+ T++  CA+     LG  
Sbjct: 262 LVSWNSVMYACLENGVFEESYGLFKGLL-NGDEGLMPDVATMVTVIPLCARQGEVRLGMV 320

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
            HG A+K GL G+  V+++L+ MYS+CG L  AR LFD    ++V+SW++MI GY +   
Sbjct: 321 FHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRD 379

Query: 153 PEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGV 209
              A E++R+M+  D ++ +EV +++++ +  +       K IH   +R+   + ++L  
Sbjct: 380 FRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDEL-- 437

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            +A A +  Y+KCG+L YA+ +F  +    V SW  +I G+++     + + L+  M   
Sbjct: 438 -VANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGS 496

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            + P   TI SL+  C  +  L  GK +H  +LRNGFE    +  +LV +Y +C +I  A
Sbjct: 497 GLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLA 556

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           +  FD M+ K+++ WN +I+ ++Q      A ++F  M  SK+ P+E++++G L  C++ 
Sbjct: 557 KLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQV 616

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            AL +GK LH +  K  L     +  +L+DMYAKCG +  +  +F     +    WN ++
Sbjct: 617 SALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLI 676

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
            GYG+HG G +A+  F  M+ +G +P+ +TFI LL AC+HAGLV EG     +M    G+
Sbjct: 677 TGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGI 736

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            PK+EHY C+VD+LGRAG L+EA E++  +P +P+  +W +LL++ + +++  +GE  A 
Sbjct: 737 KPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVAN 796

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           ++LE+ P      VL+SN YA   +W++V  +R+ MKEI ++K+ G S +E+ G V +F+
Sbjct: 797 KLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFL 856

Query: 630 RG 631
            G
Sbjct: 857 VG 858



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 162/533 (30%), Positives = 278/533 (52%), Gaps = 26/533 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +N+L++ Y++N+    A+ ++  M      V DNFT+P ++KAC  V    LG+ +HGFA
Sbjct: 163 WNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFA 222

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K  +  D +V NALI MY + G + SA  +FD+MP R++VSW++++      G+ EE+ 
Sbjct: 223 LKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESY 282

Query: 158 EVMREMRFMD--IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----I 211
            + + +   D  + P    M++++ L A   +V LG   H   +      KLG+     +
Sbjct: 283 GLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLAL------KLGLCGELKV 336

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM-IEEN 270
            ++L+DMYSKCG L  A+ LF+  N+ +V+SW  MI GY +  +      L  +M +E+ 
Sbjct: 337 NSSLLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDK 395

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF-EFSLAMANALVDMYGKCREIRSA 329
           V  +E+T+L+++  C         K +H Y LR+GF +    +ANA V  Y KC  +  A
Sbjct: 396 VKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYA 455

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             +F GM+SK V  WNA+I  + Q     KA +L++ M+ S + P+  T+  LLS C   
Sbjct: 456 EGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARL 515

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            +L  GK +H  + + G E+D  +  +LV +Y +CG +  A   F     +++  WN M+
Sbjct: 516 KSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMI 575

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
            G+  +    +AL  F  M  S + P+ I+ IG L ACS    +  GK      +H   +
Sbjct: 576 NGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKE-----LHCFAV 630

Query: 510 VPKIEHYG----CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
              +  +      ++D+  + G ++++  +   + L+   + W  L+    +H
Sbjct: 631 KSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGE-VTWNVLITGYGIH 682



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 247/497 (49%), Gaps = 17/497 (3%)

Query: 74  IPTILKACAQVLMTHLGKEIHGF-AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           I  +L+ C +     +G++IH F +       D  +   L+ MYS C S   +  +F+  
Sbjct: 96  IGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNAS 155

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLG 191
             +++  W+ ++ GY R  L  +A+ V  EM    +  P    +  ++     V DV LG
Sbjct: 156 RRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLG 215

Query: 192 KAIHACVVRNCKDEKLG-VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           +A+H   +   K + L  V +  ALI MY K G +  A ++F+++ Q ++VSW  ++   
Sbjct: 216 EAVHGFAL---KTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYAC 272

Query: 251 IRCNEINEGVRLFAEMI--EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
           +      E   LF  ++  +E + P   T++++I  C   G ++LG   H   L+ G   
Sbjct: 273 LENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCG 332

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
            L + ++L+DMY KC  +  AR LFD    K+V+ WN++I  Y++      AFEL   M+
Sbjct: 333 ELKVNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQ 391

Query: 369 V-SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG-LEVDVILKTALVDMYAKCGD 426
           +  KV+ NEVT++ +L +C E       K +H Y  + G ++ D ++  A V  YAKCG 
Sbjct: 392 MEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGS 451

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           ++ A  +F     + +  WNA++ G+  +G   +AL  ++ M  SG++P+  T   LL+A
Sbjct: 452 LHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSA 511

Query: 487 CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC--MVDLLGRAGLLDEAHEMIKSMPLRPN 544
           C+    ++ GK +   M+   G   +++ + C  +V L  + G +  A     +M    N
Sbjct: 512 CARLKSLSCGKEIHGSMLRN-GF--ELDEFICISLVSLYVQCGKILLAKLFFDNME-EKN 567

Query: 545 MIVWGALLAASKLHKNP 561
           ++ W  ++     ++ P
Sbjct: 568 LVCWNTMINGFSQNEFP 584


>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
          Length = 766

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 205/598 (34%), Positives = 339/598 (56%), Gaps = 5/598 (0%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           NP++ + S++ ++++N +   AL +++ M ++G+  D F + + ++AC ++     G+++
Sbjct: 116 NPVS-WASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQV 174

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           H  A+K+    D  V NAL+ MYS+ G +     LF+ + ++D++SW ++I G+ + G  
Sbjct: 175 HAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFE 234

Query: 154 EEALEVMREMRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            EAL+V R+M       P+E    S       V   + G+ IH   ++   D  L V   
Sbjct: 235 MEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVG-- 292

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            +L DMY++  NL  A+  F R+    +VSW  +++ Y     ++E + LF+EM +  + 
Sbjct: 293 CSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLR 352

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P  IT+  L+  C     L  G+ +H+Y+++ G +  +++ N+L+ MY +C ++ SA  +
Sbjct: 353 PDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMDV 412

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F  +K +DV+ WN++++A AQ +  ++  +LF  +  S+   + +++  +LS   E G  
Sbjct: 413 FHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYF 472

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS-EAIYRDICMWNAMMAG 451
           EM K +H Y  K GL  D +L   L+D YAKCG ++ A RLF      RD+  W++++ G
Sbjct: 473 EMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFSWSSLIVG 532

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           Y   G  +EAL  F  M   G++PN +TFIG+L ACS  G V EG   +  M    G+VP
Sbjct: 533 YAQFGYAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVP 592

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
             EH  C+VDLL RAG L EA   I  MP  P++I+W  LLAASK+H +  MG+ AA  I
Sbjct: 593 TREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGI 652

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           L I+P +    VL+ NIYA +  WN+ A +++ M+   VKK PG S V++ G +  FI
Sbjct: 653 LNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWVKLKGELKVFI 710



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 246/485 (50%), Gaps = 11/485 (2%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNG-------LDGDAYVSNALIQMYSECGSLVSARYL 128
            ++ AC+++     G+ +H   + +        L G+  + N LI MY  C +  SAR +
Sbjct: 49  ALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQV 108

Query: 129 FDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV 188
           FDEMP R+ VSW+++I  + + G   +AL +   M        + A+ S V    ++ DV
Sbjct: 109 FDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDV 168

Query: 189 DLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
             G+ +HA  +++ +   L   +  AL+ MYSK G +     LF R+    ++SW  +I+
Sbjct: 169 GTGRQVHAHALKSERGSDL--IVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIA 226

Query: 249 GYIRCNEINEGVRLFAEMI-EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           G+ +     E +++F +MI E +  P+E    S    CG VG  + G+ +H   ++   +
Sbjct: 227 GFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLD 286

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             L +  +L DMY + + + SAR  F  +++ D++ WN++++AY+    + +A  LF  M
Sbjct: 287 RDLYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEM 346

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           + S +RP+ +T+ GLL  C    AL  G+ +H+Y+ K GL+ DV +  +L+ MYA+C D+
Sbjct: 347 RDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSMYARCSDL 406

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
           + A  +F E   +D+  WN+++     H   EE L  F  + +S    + I+   +L+A 
Sbjct: 407 SSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSAS 466

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           +  G     K V        GLV        ++D   + G LD+A  + + M    ++  
Sbjct: 467 AELGYFEMVKQVH-AYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGNNRDVFS 525

Query: 548 WGALL 552
           W +L+
Sbjct: 526 WSSLI 530



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 190/391 (48%), Gaps = 8/391 (2%)

Query: 177 SMVSLFADVADVDLGKAIHACVV---RNCKDEKLG--VAIATALIDMYSKCGNLAYAKQL 231
           ++VS  + +  +  G+ +H  +V    +  D +L     +   LI MY +C     A+Q+
Sbjct: 49  ALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSARQV 108

Query: 232 FNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL 291
           F+ +   + VSW  +I+ +++     + + LF+ M+       +  + S +  C  +G +
Sbjct: 109 FDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDV 168

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
             G+ +HA+ L++     L + NALV MY K   +     LF+ +K KD++ W ++I+ +
Sbjct: 169 GTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGF 228

Query: 352 AQAHCIDKAFELFIHMKVSKV-RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
           AQ     +A ++F  M V     PNE         C   G+ E G+ +H    K  L+ D
Sbjct: 229 AQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRD 288

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
           + +  +L DMYA+  +++ A   F      D+  WN+++  Y + G   EAL+ F +M  
Sbjct: 289 LYVGCSLSDMYARFKNLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRD 348

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
           SG++P+GIT  GLL AC     +  G+ +   +V  LGL   +     ++ +  R   L 
Sbjct: 349 SGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVK-LGLDGDVSVCNSLLSMYARCSDLS 407

Query: 531 EAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
            A ++   +  + +++ W ++L A   H +P
Sbjct: 408 SAMDVFHEIKDQ-DVVTWNSILTACAQHNHP 437


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/593 (33%), Positives = 329/593 (55%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+L+    +      A+ ++  M  +G E D+ T+ +++ AC+       G+++H +  
Sbjct: 357 YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT 416

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   +  +  AL+ +Y++C  + +A   F E    +VV W+ M+  Y        +  
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R+M+  +I P++    S++     + D++LG+ IH+ +++   + +L   + + LIDM
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT--NFQLNAYVCSVLIDM 534

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G L  A  +  R     VVSWT MI+GY + N  ++ +  F +M++  +   E+ +
Sbjct: 535 YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 594

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            + +  C  +  L+ G+ +HA    +GF   L   NALV +Y +C +I  +   F+  ++
Sbjct: 595 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 654

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D + WNA++S + Q+   ++A  +F+ M    +  N  T    +   +E   ++ GK +
Sbjct: 655 GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV 714

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I K G + +  +  AL+ MYAKCG ++ A + F E   ++   WNA++  Y  HG G
Sbjct: 715 HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFG 774

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F  M  S V+PN +T +G+L+ACSH GLV +G + F+ M    GL PK EHY C
Sbjct: 775 SEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVC 834

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VD+L RAGLL  A E I+ MP++P+ +VW  LL+A  +HKN  +GE AA  +LE+EP++
Sbjct: 835 VVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPED 894

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VL+SN+YAV+ +W+     R+ MKE  VKKEPG S +EV   +H F  G
Sbjct: 895 SATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 947



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 135/527 (25%), Positives = 255/527 (48%), Gaps = 13/527 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC-AQVLMTHLGKEIHGFA 97
           +N ++      N       ++  M       +  T   +L+AC    +   + ++IH   
Sbjct: 154 WNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARI 213

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +  GL     V N LI +YS  G +  AR +FD +  +D  SW  MI G  +     EA+
Sbjct: 214 LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAI 273

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IAT 213
            +  +M  + I P+  A  S++S    +  +++G+ +H  V+      KLG +    +  
Sbjct: 274 RLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL------KLGFSSDTYVCN 327

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+ +Y   GNL  A+ +F+ ++Q   V++  +I+G  +C    + + LF  M  + + P
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T+ SL++ C   G L  G+ LHAY  + GF  +  +  AL+++Y KC +I +A   F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
              + ++V++WN ++ AY     +  +F +F  M++ ++ PN+ T   +L  C   G LE
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           +G+ +H+ I K   +++  + + L+DMYAK G ++ A+ +      +D+  W  M+AGY 
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +   ++AL  F  M   G++ + +     ++AC+    + EG+ +  +     G    +
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDL 626

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
                +V L  R G ++E++   +      N I W AL++  +   N
Sbjct: 627 PFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGN 672



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 223/458 (48%), Gaps = 12/458 (2%)

Query: 2   KIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAF 61
           KI+   LNL    +C    I+T   +     +  +  +N ++ +Y   +   ++  I+  
Sbjct: 425 KIEGALLNL--YAKCAD--IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQ 480

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           M+      + +T P+ILK C ++    LG++IH   IK     +AYV + LI MY++ G 
Sbjct: 481 MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGK 540

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           L +A  +      +DVVSW+TMI GY +    ++AL   R+M    IR  EV + + VS 
Sbjct: 541 LDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 600

Query: 182 FADVADVDLGKAIH--ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
            A +  +  G+ IH  ACV     D    +    AL+ +YS+CG +  +   F +     
Sbjct: 601 CAGLQALKEGQQIHAQACVSGFSSD----LPFQNALVTLYSRCGKIEESYLAFEQTEAGD 656

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
            ++W  ++SG+ +     E +R+F  M  E +  +  T  S +        ++ GK +HA
Sbjct: 657 NIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHA 716

Query: 300 YILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
            I + G++    + NAL+ MY KC  I  A   F  + +K+ + WNA+I+AY++     +
Sbjct: 717 VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSE 776

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALV 418
           A + F  M  S VRPN VT+VG+LS C+  G ++ G  +  +   + GL         +V
Sbjct: 777 ALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVV 836

Query: 419 DMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
           DM  + G ++ A     E  I  D  +W  +++   +H
Sbjct: 837 DMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVH 874



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 226/469 (48%), Gaps = 11/469 (2%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G+++H   +K GLD +  +S  L   Y   G L  A  +FDEMP R + +W+ MI+    
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELAS 163

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMV-SLFADVADVDLGKAIHACVV-RNCKDEKL 207
             L  E   +   M   ++ P+E     ++ +        D+ + IHA ++ +  +D   
Sbjct: 164 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD--- 220

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
              +   LID+YS+ G +  A+++F+ L      SW  MISG  +     E +RLF +M 
Sbjct: 221 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
              + P+     S++  C  +  L++G+ LH  +L+ GF     + NALV +Y     + 
Sbjct: 281 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 340

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           SA  +F  M  +D + +N +I+  +Q    +KA ELF  M +  + P+  T+  L+  C+
Sbjct: 341 SAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 400

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
             G L  G+ LH Y  K G   +  ++ AL+++YAKC D+  A   F E    ++ +WN 
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 460

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           M+  YG+      +   F  M+   + PN  T+  +L  C   G +  G+ +  +++   
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK-- 518

Query: 508 GLVPKIEHYGC--MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
               ++  Y C  ++D+  + G LD A +++     + +++ W  ++A 
Sbjct: 519 -TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG 565



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 118/255 (46%), Gaps = 2/255 (0%)

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
           G L  G+ LH+ IL+ G + +  ++  L D Y    ++  A  +FD M  + +  WN +I
Sbjct: 99  GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG-ALEMGKWLHTYIEKQGL 407
              A  + I + F LF+ M    V PNE T  G+L  C     A ++ + +H  I  QGL
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
               ++   L+D+Y++ G V+ A R+F     +D   W AM++G   + C  EA+  F D
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           M   G+ P    F  +L+AC     +  G+ +   +V  LG          +V L    G
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG-LVLKLGFSSDTYVCNALVSLYFHLG 337

Query: 528 LLDEAHEMIKSMPLR 542
            L  A  +  +M  R
Sbjct: 338 NLISAEHIFSNMSQR 352



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 129/286 (45%), Gaps = 15/286 (5%)

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE--LFI 365
           F  +++++ + ++G  R++++ RT+F  +       + A IS Y      D++F+     
Sbjct: 19  FLRSVSSSFIFIHGVPRKLKT-RTVFPTLCGTRRASF-AAISVYISE---DESFQEKRID 73

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEA-GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC 424
            ++   +RPN  T+  LL  C +  G+L+ G+ LH+ I K GL+ +  L   L D Y   
Sbjct: 74  SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 133

Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
           GD+ GA+++F E   R I  WN M+          E    FV M    V PN  TF G+L
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193

Query: 485 NACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
            AC    +  +        +   GL         ++DL  R G +D A  +   + L+ +
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253

Query: 545 MIVWGALLAASKLHKNPSMGE----IAATQILEIEPQNYGYNVLMS 586
              W A++  S L KN    E         +L I P  Y ++ ++S
Sbjct: 254 S-SWVAMI--SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLS 296


>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 683

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 211/612 (34%), Positives = 339/612 (55%), Gaps = 53/612 (8%)

Query: 67  SEVDNFTIPTI----------LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMY 116
           S+   FT PT           LK+C    MTHL K+IH    + GL  D    N L+   
Sbjct: 23  SKFSTFTNPTTGLSQQSCISYLKSCKS--MTHL-KQIHAQIFRVGLHQDIVSLNKLMAFC 79

Query: 117 SEC--GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           ++   G+L  A  +F  +    ++ ++ +I+ + + G  +  L +  ++R   + P    
Sbjct: 80  TDPFNGNLNYAEKMFKYIRYPCLLIYNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFT 139

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
              +      + +V   + +   V +   +      +  +LIDMY++       K LF+ 
Sbjct: 140 YPFVFKAIGYLGEVSKAEKLRGLVTKTGLE--FDTYVRNSLIDMYAQLALTDVMKMLFDE 197

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN-VFPSEITILSLIIECGFVGGLQL 293
           +    V+SW VMISGY++C    + + +F  M EE+ + P E T++S +  C  +  L+L
Sbjct: 198 MPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEESGLMPDEATVVSTLSACTALKRLEL 257

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCR----------------------------- 324
           GK +H Y+ R+  +F+  + NAL+DMY KC                              
Sbjct: 258 GKKIHHYV-RDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYAN 316

Query: 325 --EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
             E+  AR LF+G   +DV+IW A+I+ Y Q +  D+A  LF  M++ KV+P++  +V L
Sbjct: 317 CGELEEARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSL 376

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           L+ C + GA+E GKW+H +I++  + +D ++ TAL++MYAKCG +  A  +F     +D 
Sbjct: 377 LTGCAQTGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDT 436

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             W +++ G  M+G   +AL  F  M+++GV+P+ ITFIG+L+ACSH GLV EG+  F+ 
Sbjct: 437 ASWTSIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNS 496

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI---VWGALLAASKLHK 559
           M     + PK+EHYGC+VDLLGRAGLL+EA E+IK +P     I   ++G+LL+A +++ 
Sbjct: 497 MRMEYQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYG 556

Query: 560 NPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           N  MGE  A Q+++ E  +   + L++NIYA A+RW DV  VRR MK++ VKK PG SS+
Sbjct: 557 NVEMGERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSI 616

Query: 620 EVNGLVHKFIRG 631
           EV+ ++H+F  G
Sbjct: 617 EVDSIIHEFFSG 628



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/431 (31%), Positives = 216/431 (50%), Gaps = 36/431 (8%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN ++ ++ K       L +++ +R++G   DNFT P + KA   +      +++ G   
Sbjct: 105 YNLIIKAFAKKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVT 164

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+ D YV N+LI MY++       + LFDEMP+RDV+SW+ MI GY +    E+A+ 
Sbjct: 165 KTGLEFDTYVRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAIN 224

Query: 159 VMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           V   M+    + P E  ++S +S    +  ++LGK IH  V  N K   +   I  AL+D
Sbjct: 225 VFCRMQEESGLMPDEATVVSTLSACTALKRLELGKKIHHYVRDNVKFTPI---IGNALLD 281

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI--------------------- 256
           MY KCG L+ A+ +F  +   +V+ WT M+SGY  C E+                     
Sbjct: 282 MYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEEARELFEGSPIRDVVIWTAM 341

Query: 257 ----------NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
                     +E V LF EM    V P +  ++SL+  C   G ++ GKW+H +I  N  
Sbjct: 342 INGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFIDENRI 401

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
                +  AL++MY KC  I  A  +F G++ KD   W ++I   A      KA ELF  
Sbjct: 402 PIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSKALELFSK 461

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
           MK + VRP+++T +G+LS C+  G +E G K+ ++   +  ++  V     LVD+  + G
Sbjct: 462 MKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRMEYQIKPKVEHYGCLVDLLGRAG 521

Query: 426 DVNGAYRLFSE 436
            +N A  L  +
Sbjct: 522 LLNEAEELIKK 532



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 105/205 (51%), Gaps = 2/205 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++  Y++ N+   A+ ++  M+    + D F + ++L  CAQ      GK IH F  
Sbjct: 338 WTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQTGAIEQGKWIHEFID 397

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +N +  DA V  ALI+MY++CG +  A  +F  +  +D  SW+++I G    G   +ALE
Sbjct: 398 ENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDTASWTSIICGLAMNGKTSKALE 457

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+   +RP ++  I ++S  +    V+ G+      +R     K  V     L+D+
Sbjct: 458 LFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNS-MRMEYQIKPKVEHYGCLVDL 516

Query: 219 YSKCGNLAYAKQLFNRL-NQNSVVS 242
             + G L  A++L  ++ ++N  ++
Sbjct: 517 LGRAGLLNEAEELIKKIPDENKAIT 541


>gi|92429671|gb|ABE77204.1| unknown [Sorghum bicolor]
          Length = 795

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 202/601 (33%), Positives = 333/601 (55%), Gaps = 3/601 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  +   + P  AL  Y  M   G+  D FT P +LK CA+      G+  H   I
Sbjct: 88  HNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVLKCCARAGALGEGRAAHAAVI 147

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL  D Y +N+L+ +Y++ G +  A  +FD MP RD+VSW+TM+ GY   G+   AL 
Sbjct: 148 KLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTMVDGYVSNGMGALALA 207

Query: 159 VMREMR-FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
             REM   + +    V +I+ ++     + + LG+ IH   +R+  ++   V + T+L+D
Sbjct: 208 CFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHGLEQD--VKVGTSLVD 265

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY KCGN+ +A+ +F ++   +VV+W  MI GY       +    F +M  +      +T
Sbjct: 266 MYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGYALNERPVDAFDCFMQMRVDGFQVEVVT 325

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
            ++L+  C        G+ +HAY++R  F   + +  AL++MYGK  ++ S+  +F  + 
Sbjct: 326 AINLLTACAQTESSLFGRSVHAYVVRRHFLPHVVLETALLEMYGKVGKVESSEKIFGQIT 385

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            K ++ WN +I+AY       +A  LF+ +    + P+  TM  ++      G++   K 
Sbjct: 386 DKTLVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQ 445

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H+YI K G     ++  A++ MYA+CG++  +  +F +   +D+  WN ++ GY +HG 
Sbjct: 446 MHSYIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQ 505

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G+ AL  F +M+ SG++PN  TF+ +L ACS +GL  EG   F+ M    G++P+IEHYG
Sbjct: 506 GKIALEMFDEMKCSGMEPNESTFVSVLTACSVSGLEAEGWKEFNSMQQEYGMIPQIEHYG 565

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CM DLLGRAG L E    I++MP+ P   +WG+LL AS+   +  + E AA +I ++E  
Sbjct: 566 CMTDLLGRAGELREVLRFIENMPIAPTSRIWGSLLTASRNKNDIDIAEYAAERIFQLEHN 625

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWK 637
           N G  V++S++YA A RW DV  +R +MKE  +++    S VE+N     F+ G M + +
Sbjct: 626 NTGCYVVLSSMYADAGRWEDVERIRSLMKEKGLRRTEARSLVELNNKECSFVNGDMSHPQ 685

Query: 638 S 638
           S
Sbjct: 686 S 686



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 161/342 (47%), Gaps = 3/342 (0%)

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           +LI  +   G +  A   F  + +       VMI G+   +   + +  +  M++    P
Sbjct: 59  SLILSHVAAGRMDEAADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARP 118

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T   ++  C   G L  G+  HA +++ G    +  AN+LV +Y K   +  A  +F
Sbjct: 119 DRFTFPVVLKCCARAGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVF 178

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS-KVRPNEVTMVGLLSLCTEAGAL 392
           DGM ++D++ WN ++  Y        A   F  M  + +V  + V ++  L+ C    AL
Sbjct: 179 DGMPARDIVSWNTMVDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESAL 238

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
            +G+ +H Y  + GLE DV + T+LVDMY KCG+V  A  +F++   R +  WN M+ GY
Sbjct: 239 ALGREIHGYAIRHGLEQDVKVGTSLVDMYCKCGNVFFAENVFAKMPLRTVVTWNCMIGGY 298

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
            ++    +A   F+ M   G +   +T I LL AC+       G+SV   +V     +P 
Sbjct: 299 ALNERPVDAFDCFMQMRVDGFQVEVVTAINLLTACAQTESSLFGRSVHAYVVR-RHFLPH 357

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +     ++++ G+ G + E+ E I        ++ W  ++AA
Sbjct: 358 VVLETALLEMYGKVGKV-ESSEKIFGQITDKTLVSWNNMIAA 398



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 105/235 (44%), Gaps = 5/235 (2%)

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           A   F G+      + N +I  +A A     A   +  M  +  RP+  T   +L  C  
Sbjct: 73  AADAFAGVTRPGAFLHNVMIRGFADADLPLDALAAYRAMLDAGARPDRFTFPVVLKCCAR 132

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
           AGAL  G+  H  + K GL  DV    +LV +YAK G V  A R+F     RDI  WN M
Sbjct: 133 AGALGEGRAAHAAVIKLGLGADVYTANSLVALYAKLGLVGDAERVFDGMPARDIVSWNTM 192

Query: 449 MAGYGMHGCGEEALIFFVDMERS-GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HG 506
           + GY  +G G  AL  F +M  +  V  + +  I  L AC     +  G+ +    + HG
Sbjct: 193 VDGYVSNGMGALALACFREMNDALQVGHDSVGVIAALAACCLESALALGREIHGYAIRHG 252

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
           L    K+     +VD+  + G +  A  +   MPLR  ++ W  ++    L++ P
Sbjct: 253 LEQDVKVG--TSLVDMYCKCGNVFFAENVFAKMPLR-TVVTWNCMIGGYALNERP 304



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 83/145 (57%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++ +Y+       A+ ++  +       D FT+ T++ A   +      K++H 
Sbjct: 389 LVSWNNMIAAYMYMEMYQEAIALFLELLNQPLYPDYFTMTTVVPAFVLLGSIRQCKQMHS 448

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + +K G      + NA++ MY+ CG++V++R +FD+MP +DV+SW+T+I GY   G  + 
Sbjct: 449 YIVKLGYGDSTLIMNAVMHMYARCGNIVASREIFDKMPGKDVISWNTIIIGYAIHGQGKI 508

Query: 156 ALEVMREMRFMDIRPSEVAMISMVS 180
           ALE+  EM+   + P+E   +S+++
Sbjct: 509 ALEMFDEMKCSGMEPNESTFVSVLT 533


>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 708

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/581 (35%), Positives = 321/581 (55%), Gaps = 6/581 (1%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           ++  Y  NN+    +  Y  + K+G   D+      LKAC +V     GK+IH   +K  
Sbjct: 125 ILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVP 184

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
              D  V   L+ MY++CG + S+  +F+++  R+VV W++MI GY +  L EE L +  
Sbjct: 185 -SFDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFN 243

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
            MR   +  +E    ++V     +  +  GK  H C++++    +L   + T+L+DMY K
Sbjct: 244 RMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKS--GIELSSCLVTSLLDMYVK 301

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
           CG+++ A+++FN  +   +V WT MI GY     +NE + LF +M    + P+ +TI S+
Sbjct: 302 CGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASV 361

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +  CG VG L+LG+ +H   ++ G  +   +ANALV MY KC + R A+ +F+    KD+
Sbjct: 362 LSGCGLVGNLELGRSIHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDI 420

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           + WN++IS ++Q   I +A  LF  M    V PN VT+  L S C   G+L +G  LH Y
Sbjct: 421 VAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAY 480

Query: 402 IEKQGL--EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
             K G      V + TAL+D YAKCGD   A  +F     ++   W+AM+ GYG  G  +
Sbjct: 481 SVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTK 540

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
            +L  F +M +   KPN  TF  +L+ACSH G+V EGK  F  M       P  +HY CM
Sbjct: 541 GSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCM 600

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNY 579
           VD+L RAG L++A ++I+ MP++P++  +GA L    +H    +GEI   ++L++ P + 
Sbjct: 601 VDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDA 660

Query: 580 GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
            Y VL+SN+YA   RW+    VR +MK+  + K  G S +E
Sbjct: 661 SYYVLVSNLYASDGRWSQAKEVRNLMKQRGLSKIAGHSIME 701



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 147/471 (31%), Positives = 237/471 (50%), Gaps = 18/471 (3%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           ++ HG    NGL GD  ++  L+ +Y   G    AR +FD++P  D   W  ++R Y   
Sbjct: 73  RQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWKVILRCY--- 129

Query: 151 GLPEEALEVMREMRFMDIRP------SEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
            L  E+ EV   ++F D+         ++     +    +V D+D GK IH  +V   K 
Sbjct: 130 CLNNESFEV---IKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIV---KV 183

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
                 + T L+DMY+KCG +  + ++F  +   +VV WT MI+GY++ +   EG+ LF 
Sbjct: 184 PSFDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFN 243

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
            M E +V  +E T  +L++ C  +  L  GKW H  ++++G E S  +  +L+DMY KC 
Sbjct: 244 RMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCG 303

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
           +I +AR +F+     D+++W A+I  Y     +++A  LF  M    ++PN VT+  +LS
Sbjct: 304 DISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLS 363

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
            C   G LE+G+ +H    K G+  D  +  ALV MYAKC     A  +F     +DI  
Sbjct: 364 GCGLVGNLELGRSIHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVA 422

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           WN++++G+  +G   EAL  F  M    V PNG+T   L +AC+  G +  G S+    V
Sbjct: 423 WNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSV 482

Query: 505 HGLGLVPKIEHYG-CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
               L     H G  ++D   + G  + A  +  ++    N I W A++  
Sbjct: 483 KLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIE-EKNTITWSAMIGG 532



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 238/442 (53%), Gaps = 13/442 (2%)

Query: 21  IKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA 80
           IK+ +K      +  +  + S++  Y+KN+     L ++  MR+N    + +T  T++ A
Sbjct: 204 IKSSYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMA 263

Query: 81  CAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSW 140
           C ++   H GK  HG  IK+G++  + +  +L+ MY +CG + +AR +F+E  + D+V W
Sbjct: 264 CTKLRALHQGKWFHGCLIKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMW 323

Query: 141 STMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR 200
           + MI GY   G   EAL + ++M  + I+P+ V + S++S    V +++LG++IH   + 
Sbjct: 324 TAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSI- 382

Query: 201 NCKDEKLGV---AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN 257
                K+G+    +A AL+ MY+KC     AK +F   ++  +V+W  +ISG+ +   I+
Sbjct: 383 -----KVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIH 437

Query: 258 EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF--EFSLAMANA 315
           E + LF  M  E+V P+ +T+ SL   C  +G L +G  LHAY ++ GF    S+ +  A
Sbjct: 438 EALFLFHRMNTESVMPNGVTVASLFSACASLGSLAIGSSLHAYSVKLGFLASSSVHVGTA 497

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
           L+D Y KC +  SAR +FD ++ K+ + W+A+I  Y +      + ELF  M   + +PN
Sbjct: 498 LLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPN 557

Query: 376 EVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           E T   +LS C+  G +  G K+  +  +           T +VDM A+ G++  A  + 
Sbjct: 558 ESTFTSVLSACSHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDII 617

Query: 435 SE-AIYRDICMWNAMMAGYGMH 455
            +  I  D+  + A + G GMH
Sbjct: 618 EKMPIQPDVRCFGAFLHGCGMH 639


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 207/592 (34%), Positives = 322/592 (54%), Gaps = 5/592 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y K  +   +L+++  M + G   D   I  +LK    +     G   HG+ +
Sbjct: 385 WNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIV 444

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G      V NALI  Y++   +  A  +F+ MP +D +SW+++I G    GL  EA+E
Sbjct: 445 KLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIE 504

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG-VAIATALID 217
           +   M         V ++S++   A       G+ +H   V   K   +G  ++A AL+D
Sbjct: 505 LFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSV---KTGLIGETSLANALLD 561

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYS C +     Q+F  + Q +VVSWT MI+ Y+R    ++   L  EM+ + + P    
Sbjct: 562 MYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFA 621

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           + S +        L+ GK +H Y +RNG E  L +ANAL++MY KCR +  AR +FD + 
Sbjct: 622 VTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVT 681

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           +KDV+ WN +I  Y++ +  +++F LF  M + + RPN VTM  +L       +LE G+ 
Sbjct: 682 NKDVISWNTLIGGYSRNNFPNESFSLFSDMLL-QFRPNAVTMTCILPAAASISSLERGRE 740

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H Y  ++G   D     ALVDMY KCG +  A  LF     +++  W  M+AGYGMHG 
Sbjct: 741 IHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGF 800

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G+ A+  F  M  SG++P+  +F  +L AC H+GL  EG+  F  M     + PK++HY 
Sbjct: 801 GKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYT 860

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           C+VDLL R G L EA E I+SMP+ P+  +W +LL   ++HKN  + E  A ++ ++EP+
Sbjct: 861 CIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPE 920

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           N GY VL++NIYA A RW  V  ++  +    +++  G+S +EV   VH FI
Sbjct: 921 NTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFI 972



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 232/470 (49%), Gaps = 9/470 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + SL+++Y K      A++++  M+  G   D   +  +LK  + +     G+ IHG   
Sbjct: 172 WTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLE 231

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL     V+NALI +YS CG +  A  +FD M  RD +SW++MI G    G    A++
Sbjct: 232 KLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVD 291

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN-----CKDEKLGV---A 210
           +  +M       S V ++S++   A +    +GKA+H   V++         + G+   A
Sbjct: 292 LFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAA 351

Query: 211 IATALIDMYSKCGNLAYAKQLFNRL-NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
           + + L+ MY KCG++A A+++F+ + ++ +V  W +++ GY +  E  E + LF +M E 
Sbjct: 352 LGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHEL 411

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            + P E  I  L+     +   + G   H YI++ GF    A+ NAL+  Y K   I  A
Sbjct: 412 GIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDA 471

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             +F+ M  +D + WN+VIS  +      +A ELFI M       + VT++ +L  C ++
Sbjct: 472 VLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQS 531

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
                G+ +H Y  K GL  +  L  AL+DMY+ C D     ++F     +++  W AM+
Sbjct: 532 RYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMI 591

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
             Y   G  ++      +M   G++P+       L+A +    + +GKSV
Sbjct: 592 TSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSV 641



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 147/555 (26%), Positives = 259/555 (46%), Gaps = 58/555 (10%)

Query: 44  TSYIKNNKPSSAL---------------NIYAFMRKNGSE--VDNFTIPTILKACAQVLM 86
           +S+   N PS AL               ++   +R  GS+  VD  +   +++ C +   
Sbjct: 53  SSWSTKNPPSRALSSDVNLRIQRLCQAGDLAGALRLLGSDGGVDVRSYCMVVQLCGEERS 112

Query: 87  THLGKEIHGF-----AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR--DVVS 139
               K  H       A   G  G + +   L+  Y +CG L  AR +FD MP +  DV  
Sbjct: 113 LEAAKRAHALIRASSAAATGGKG-SVLGKRLVLAYLKCGDLGEARTVFDGMPPQAADVRV 171

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           W++++  Y + G  +EA+ + R+M+   + P   A+  ++   + +  +  G+ IH  + 
Sbjct: 172 WTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLL- 230

Query: 200 RNCKDEKLGV----AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
                EKLG+    A+A ALI +YS+CG +  A ++F+ ++    +SW  MI G      
Sbjct: 231 -----EKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGW 285

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL----- 310
               V LF++M  +    S +T+LS++  C  +G   +GK +H Y +++G  + L     
Sbjct: 286 HGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQS 345

Query: 311 -----AMANALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELF 364
                A+ + LV MY KC ++ SAR +FD M SK +V +WN ++  YA+    +++  LF
Sbjct: 346 GIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLF 405

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC 424
           + M    + P+E  +  LL   T       G   H YI K G      +  AL+  YAK 
Sbjct: 406 VQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISFYAKS 465

Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
             +  A  +F+    +D   WN++++G   +G   EA+  F+ M   G + + +T + +L
Sbjct: 466 NMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTLLSVL 525

Query: 485 NACSH-----AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM 539
            AC+      AG V  G SV        GL+ +      ++D+          +++ +SM
Sbjct: 526 PACAQSRYWFAGRVVHGYSV------KTGLIGETSLANALLDMYSNCSDWQSTNQIFRSM 579

Query: 540 PLRPNMIVWGALLAA 554
             + N++ W A++ +
Sbjct: 580 G-QKNVVSWTAMITS 593


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 205/529 (38%), Positives = 311/529 (58%), Gaps = 17/529 (3%)

Query: 112 LIQMYSECGSLVSARYLFD----------EMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
           LI +YS+ G L SAR LFD          + PN  + +  TM+R Y   G   EA+++  
Sbjct: 64  LIILYSKLGDLHSARTLFDHRHHHHHGHTQAPNSFLCN--TMLRAYANAGRSYEAIDLYI 121

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
            M+ M +  +      ++ + A       G+ +H  VVR      L V    AL+DMY+K
Sbjct: 122 YMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLFVE--AALVDMYAK 179

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
           CG +  A ++F+R+    VV WT MI+ Y +     + + LF +M EE     EIT +S+
Sbjct: 180 CGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISV 239

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
               G +G  ++   +H Y + NGF   +++ N++V MY KC  +  AR +FD M+ ++ 
Sbjct: 240 ASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNG 299

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           + WN+++S Y Q      A  LF  M+ S+  PN VT + ++S C+  G+  +G+ LH +
Sbjct: 300 ISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNF 359

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS--EAIYRDICMWNAMMAGYGMHGCGE 459
           +    +++D  L+ A++DMY KCGD++ A  +F+  E   RD+  WN +++GYG+HG G+
Sbjct: 360 VISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGK 419

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           EAL  F  M+  GV+PN ITF  +L+ACSHAGL+ EG+  F  M   L + P+++HY CM
Sbjct: 420 EALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTK-LSVRPEMKHYACM 478

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNY 579
           VD+LGRAG L+EA  +IK +P RP+  VWGALL A ++H N  +GEIAA  + ++EP++ 
Sbjct: 479 VDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHT 538

Query: 580 GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           GY VLMSNIYA +N+W +V  VR+ MK   +KK   FS +E    VH F
Sbjct: 539 GYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGF 587



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 229/424 (54%), Gaps = 7/424 (1%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           N+++ +Y    +   A+++Y +M++ G  V+NFT P +LK CA  L    G+ +HG  ++
Sbjct: 101 NTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVR 160

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
            G   D +V  AL+ MY++CG +  A  +FD M  RDVV W+ MI  Y +   P +AL +
Sbjct: 161 TGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALML 220

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG-VAIATALIDM 218
            R+M+       E+  IS+ S    + D  +  ++H   V N     +G V++  +++ M
Sbjct: 221 FRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLN---GFIGDVSVGNSIVGM 277

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCGN+  A+ +F+R+ + + +SW  M+SGY +     + + LF +M      P+ +T 
Sbjct: 278 YAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTA 337

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG--M 336
           L ++  C ++G   LG+ LH +++ +  +    + NA++DMY KC ++ +A  +F+   +
Sbjct: 338 LIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCEL 397

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             +DV  WN +IS Y       +A ELF  M+V  V PN++T   +LS C+ AG ++ G+
Sbjct: 398 GERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGR 457

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC-MWNAMMAGYGMH 455
                + K  +  ++     +VDM  + G +N A+RL  +   R    +W A++    +H
Sbjct: 458 KCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIH 517

Query: 456 GCGE 459
           G  E
Sbjct: 518 GNTE 521


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 216/651 (33%), Positives = 342/651 (52%), Gaps = 27/651 (4%)

Query: 2   KIKNGFLNLEQTRQCHAHIIKTHFKFSYTN---------IINPLTRYNS-----LVTSYI 47
           K  +GFL   +    H+ ++  H   +Y+          + + +++ N+     L+    
Sbjct: 88  KTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQRNTFSWTVLIAGLA 147

Query: 48  KNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAY 107
           +N         +  M+  G   D F    IL+ C  +    LG  +H   +  G     +
Sbjct: 148 ENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTF 207

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           VS AL+ MY++   +  +  +F+ M   +VVSW+ MI G+    L  +A ++   M    
Sbjct: 208 VSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEG 267

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
           + P     I +      + DV+  K +    +    D      + TALIDM SKCG+L  
Sbjct: 268 VTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSN--TLVGTALIDMNSKCGSLQE 325

Query: 228 AKQLFN------RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
           A+ +FN      R N      W  MISGY+R     + + LFA+M + +++    T  S+
Sbjct: 326 ARSIFNSHFITCRFN----APWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSV 381

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFS-LAMANALVDMYGKCREIRSARTLFDGMKSKD 340
                 +  L LGK +HA  +++G E + ++++NA+ + Y KC  +   R +F+ M+ +D
Sbjct: 382 FNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRD 441

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           ++ W ++++AY+Q    DKA E+F +M+   + PN+ T   +L  C     LE G+ +H 
Sbjct: 442 LISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHG 501

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
            I K GL++D  +++ALVDMYAKCG +  A ++F+     D   W A++AG+  HG  ++
Sbjct: 502 IICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDD 561

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           AL  F  M + GV+PN +TF+ +L ACSH GLV EG   F  M    GLVP++EHY C+V
Sbjct: 562 ALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIV 621

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYG 580
           DLL R G L++A E I  MP+ PN +VW  LL A ++H N  +GE+AA +IL  + +N  
Sbjct: 622 DLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAENSA 681

Query: 581 YNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             VL+SN Y  +  + D   +R +MKE  VKKEPG S + VNG +HKF  G
Sbjct: 682 TYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVNGTLHKFYAG 732



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 190/394 (48%), Gaps = 6/394 (1%)

Query: 166 MDIRPSEVAMISMVSLFADVADVDL---GKAIHACVVRNCKDEKLGVAIATALIDMYSKC 222
           +D   S + +  +V L  D  D       K +H  ++++       + +   +   YSKC
Sbjct: 59  VDKTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKC 118

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI 282
            ++  A +LF++++Q +  SWTV+I+G        +G   F EM  + +FP +     ++
Sbjct: 119 SDIDAACRLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGIL 178

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
             C  +  ++LG  +HA I+  GF     ++ AL++MY K +EI  +  +F+ M   +V+
Sbjct: 179 QICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVV 238

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
            WNA+I+ +        AF+LF+ M    V P+  T +G+         +   K +  Y 
Sbjct: 239 SWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYA 298

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY--RDICMWNAMMAGYGMHGCGEE 460
            + G++ + ++ TAL+DM +KCG +  A  +F+      R    WNAM++GY   G  E+
Sbjct: 299 LELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEK 358

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           AL  F  M ++ +  +  T+  + NA +    ++ GK V  + +     V  +     + 
Sbjct: 359 ALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVA 418

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +   + G L++  ++   M  R ++I W +L+ A
Sbjct: 419 NAYAKCGSLEDVRKVFNRMEDR-DLISWTSLVTA 451


>gi|108706064|gb|ABF93859.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|125584837|gb|EAZ25501.1| hypothetical protein OsJ_09324 [Oryza sativa Japonica Group]
          Length = 781

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 204/601 (33%), Positives = 338/601 (56%), Gaps = 3/601 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  +     P+ AL  Y  M ++G+  D FT P ++K CA++     G+  HG  I
Sbjct: 75  HNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVI 134

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+ D Y  N+L+  Y++ G +  A  +FD MP RD+V+W+TM+ GY   GL   AL 
Sbjct: 135 KLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVSNGLGSLALA 194

Query: 159 VMREMR-FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
             +EM   ++++   V +I+ ++          GK IH  V+R+  ++   + + T+L+D
Sbjct: 195 CFQEMHDALEVQHDSVGIIAALAACCLEVSSMQGKEIHGYVIRHGLEQD--IKVGTSLLD 252

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY KCG +AYA+ +F  +   +VV+W  MI GY      +E    F +M  E +    +T
Sbjct: 253 MYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVT 312

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
            ++L+  C        G+ +H Y++R  F   + +  AL++MYGK  ++ S+  +F  + 
Sbjct: 313 AINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIA 372

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           +K ++ WN +I+AY       +A  LF+ +    + P+  TM  ++      G+L   + 
Sbjct: 373 NKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQ 432

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H+YI   G   + ++  A++ MYA+ GDV  +  +F + + +D+  WN M+ GY +HG 
Sbjct: 433 IHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQ 492

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G+ AL  F +M+ +G++PN  TF+ +L ACS +GLV EG   F+ M+   G++P+IEHYG
Sbjct: 493 GKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYG 552

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CM DLLGR G L E  + I+SMP+ P   VWG+LL AS+   +  + E AA +I ++E  
Sbjct: 553 CMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHD 612

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWK 637
           N G  +++S++YA A RW DV  VR +MKE  +++    S VE++     F  G M + +
Sbjct: 613 NTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQ 672

Query: 638 S 638
           S
Sbjct: 673 S 673



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 161/338 (47%), Gaps = 14/338 (4%)

Query: 30  TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL 89
           T  +  +  +N ++  Y  N +P  A + +  MR  G +V+  T   +L ACAQ   +  
Sbjct: 269 TMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLY 328

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G+ +HG+ ++        +  AL++MY + G + S+  +F ++ N+ +VSW+ MI  Y  
Sbjct: 329 GRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMY 388

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
             +  EA+ +  E+    + P    M ++V  F  +  +   + IH+ ++       LG 
Sbjct: 389 KEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYII------GLGY 442

Query: 210 A----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           A    I  A++ MY++ G++  ++++F+++    V+SW  MI GY    +    + +F E
Sbjct: 443 AENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDE 502

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN--GFEFSLAMANALVDMYGKC 323
           M    + P+E T +S++  C  V GL    W+H  ++    G    +     + D+ G+ 
Sbjct: 503 MKYNGLQPNESTFVSVLTACS-VSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGRE 561

Query: 324 REIRSARTLFDGMK-SKDVMIWNAVISAYAQAHCIDKA 360
            ++R      + M       +W ++++A    + ID A
Sbjct: 562 GDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIA 599



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 11/232 (4%)

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            ++  D  + N +I  +A A     A   +  M     RP+  T   ++  C   G L+ 
Sbjct: 66  AVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDE 125

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G+  H  + K GLE DV    +LV  YAK G V  A R+F     RDI  WN M+ GY  
Sbjct: 126 GRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNTMVDGYVS 185

Query: 455 HGCGEEALIFFVDMERS-GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GL 509
           +G G  AL  F +M  +  V+ + +  I  L AC       E  S+  K +HG     GL
Sbjct: 186 NGLGSLALACFQEMHDALEVQHDSVGIIAALAAC-----CLEVSSMQGKEIHGYVIRHGL 240

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
              I+    ++D+  + G +  A  +  +MPLR  ++ W  ++    L++ P
Sbjct: 241 EQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR-TVVTWNCMIGGYALNERP 291



 Score = 42.7 bits (99), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 11/143 (7%)

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
           K+ +V + A+ G ++ A    +     D  + N M+ G+   G    AL  +  M   G 
Sbjct: 45  KSLVVSLAAE-GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH--YGC--MVDLLGRAGLL 529
           +P+  TF  ++  C+  G + EG++      HG+ +   +EH  Y C  +V    + GL+
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRA-----AHGMVIKLGLEHDVYTCNSLVAFYAKLGLV 158

Query: 530 DEAHEMIKSMPLRPNMIVWGALL 552
           ++A  +   MP+R +++ W  ++
Sbjct: 159 EDAERVFDGMPVR-DIVTWNTMV 180


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/593 (33%), Positives = 326/593 (54%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L++ + +      AL I+  M+ +G   D  T+ ++L ACA V     GK++H + +
Sbjct: 213 FNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLL 272

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+  D     +L+ +Y +CG + +A  +F+     +VV W+ M+  Y +     ++ E
Sbjct: 273 KAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFE 332

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+   I P++     ++        ++LG+ IH+  ++N  +  + V+    LIDM
Sbjct: 333 IFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVS--GVLIDM 390

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSK   L  A+++   L +  VVSWT MI+GY++ +   E +  F EM +  V+P  I +
Sbjct: 391 YSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGL 450

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S    C  +  ++ G  +HA +  +G+   +++ N LV++Y +C     A +LF  +  
Sbjct: 451 ASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDH 510

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN +IS + Q+   ++A  +F+ M  +  + N  T +  +S       ++ GK +
Sbjct: 511 KDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQV 570

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    K G   +  +  AL+ +Y KCG +  A  +FSE   R+   WN ++     HG G
Sbjct: 571 HGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRG 630

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F  M++ G+KPN +TFIG+L ACSH GLV EG S F  M +  GL P  +HY C
Sbjct: 631 LEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYAC 690

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VD+LGRAG LD A   +  MP+  N ++W  LL+A K+HKN  +GE+AA  +LE+EP +
Sbjct: 691 VVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHD 750

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VL+SN YAV  +W +   VR++MK+  ++KEPG S +EV   VH F  G
Sbjct: 751 SASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVKNAVHAFFVG 803



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 267/518 (51%), Gaps = 4/518 (0%)

Query: 41  SLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
           ++++ Y +      A  +Y+ M         + + ++L AC +  +   G+ IH    K 
Sbjct: 114 AMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQ 173

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
               + +V NALI +Y   GS   A  +F +M   D V+++T+I G+ + G  E AL++ 
Sbjct: 174 AFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIF 233

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
            EM+   +RP  V + S+++  A V D+  GK +H+ +++             +L+D+Y 
Sbjct: 234 DEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLK--AGMSFDYITEGSLLDLYV 291

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           KCG++  A  +FN  ++ +VV W +M+  Y + +++ +   +F +M    + P++ T   
Sbjct: 292 KCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPC 351

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           ++  C   G ++LG+ +H+  ++NGFE  + ++  L+DMY K R +  AR + + ++ +D
Sbjct: 352 ILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRD 411

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           V+ W ++I+ Y Q    ++A   F  M+   V P+ + +    S C    A+  G  +H 
Sbjct: 412 VVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHA 471

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
            +   G   D+ +   LV++YA+CG    A+ LF E  ++D   WN +++G+G     E+
Sbjct: 472 RVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQ 531

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           AL+ F+ M ++G K N  TFI  ++A ++   + +GK V  + V   G   + E    ++
Sbjct: 532 ALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVK-TGHTSETEVANALI 590

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            L G+ G +++A  +   M LR N + W  ++ +   H
Sbjct: 591 SLYGKCGSIEDAKMIFSEMSLR-NEVSWNTIITSCSQH 627



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 160/556 (28%), Positives = 280/556 (50%), Gaps = 14/556 (2%)

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC-AQVLMTHLGKEIHGFAIKNG 101
           +  +I  + P   L++ A    +   + +  +   L+AC  +     L  EIH  ++  G
Sbjct: 14  LAKFIVPDNPEKILSLVAAKASHHRALGSADLTCALQACRGRGNRWPLVLEIHATSVVRG 73

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
           L  D  + N LI +Y++ G +  AR +F E+ +RD VSW  M+ GY + GL +EA  +  
Sbjct: 74  LGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYS 133

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALIDMY 219
           +M +  + P+   + S++S          G+ IHA V +   C +  +G     ALI +Y
Sbjct: 134 QMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVG----NALIALY 189

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
              G+   A+++F  +     V++  +ISG+ +C      +++F EM    + P  +T+ 
Sbjct: 190 LGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVA 249

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           SL+  C  VG LQ GK LH+Y+L+ G  F      +L+D+Y KC +I +A  +F+     
Sbjct: 250 SLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRT 309

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           +V++WN ++ AY Q   + K+FE+F  M+ + + PN+ T   +L  CT  G +E+G+ +H
Sbjct: 310 NVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIH 369

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
           +   K G E D+ +   L+DMY+K   ++ A ++      RD+  W +M+AGY  H   E
Sbjct: 370 SLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCE 429

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           EAL  F +M+  GV P+ I      +AC+    + +G  +  + V+  G    I  +  +
Sbjct: 430 EALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHAR-VYVSGYAADISIWNTL 488

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNY 579
           V+L  R G  +EA  + + +  + + I W  L++         + E A    +++     
Sbjct: 489 VNLYARCGRSEEAFSLFREIDHK-DEITWNGLISG---FGQSRLYEQALMVFMKMSQAGA 544

Query: 580 GYNV--LMSNIYAVAN 593
            YNV   +S I A+AN
Sbjct: 545 KYNVFTFISAISALAN 560



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 229/473 (48%), Gaps = 28/473 (5%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYT-------------------NIINPLTR-----YNSLVT 44
           +L++ +Q H++++K    F Y                    +I N   R     +N ++ 
Sbjct: 260 DLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLV 319

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
           +Y + +  + +  I+  M+  G   + FT P IL+ C       LG++IH  +IKNG + 
Sbjct: 320 AYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFES 379

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           D YVS  LI MYS+   L  AR + + +  RDVVSW++MI GY +    EEAL   +EM+
Sbjct: 380 DMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQ 439

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
              + P  + + S  S  A +  +  G  IHA V          ++I   L+++Y++CG 
Sbjct: 440 DCGVWPDNIGLASAASACAGIKAMRQGLQIHARVY--VSGYAADISIWNTLVNLYARCGR 497

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
              A  LF  ++    ++W  +ISG+ +     + + +F +M +     +  T +S I  
Sbjct: 498 SEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISA 557

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
              +  ++ GK +H   ++ G      +ANAL+ +YGKC  I  A+ +F  M  ++ + W
Sbjct: 558 LANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSW 617

Query: 345 NAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIE 403
           N +I++ +Q     +A +LF  MK   ++PN+VT +G+L+ C+  G +E G  +  +   
Sbjct: 618 NTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSN 677

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
             GL         +VD+  + G ++ A R   E  I  +  +W  +++   +H
Sbjct: 678 VYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVH 730


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 204/599 (34%), Positives = 342/599 (57%), Gaps = 3/599 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  +NSL++ Y  +     AL IY  ++ +    D+FT+ ++L A   +L+   G+ 
Sbjct: 169 VRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQG 228

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HGFA+K+G++    V+N L+ MY +      AR +FDEM  RD VS++TMI GY +  +
Sbjct: 229 LHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEM 288

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            EE++ +  E      +P  + + S++     + D+ L K I+  +++      L   + 
Sbjct: 289 VEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK--AGFVLESTVR 345

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
             LID+Y+KCG++  A+ +FN +     VSW  +ISGYI+  ++ E ++LF  M+     
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
              IT L LI     +  L+ GK LH+  +++G    L+++NAL+DMY KC E+  +  +
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 465

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F  M + D + WN VISA  +        ++   M+ S+V P+  T +  L +C    A 
Sbjct: 466 FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK 525

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
            +GK +H  + + G E ++ +  AL++MY+KCG +  + R+F     RD+  W  M+  Y
Sbjct: 526 RLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAY 585

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
           GM+G GE+AL  F DME+SG+ P+ + FI ++ ACSH+GLV EG + F+KM     + P 
Sbjct: 586 GMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPM 645

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           IEHY C+VDLL R+  + +A E I++MP++P+  +W ++L A +   +    E  + +I+
Sbjct: 646 IEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRII 705

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           E+ P + GY++L SN YA   +W+ V+ +R+ +K+  + K PG+S +EV   VH F  G
Sbjct: 706 ELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSG 764



 Score =  274 bits (701), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 167/592 (28%), Positives = 306/592 (51%), Gaps = 33/592 (5%)

Query: 9   NLEQTRQCHAHIIK-----------------THFKFSYTNI-----INPLTR---YNSLV 43
           NL + R+ HA +I                  +HF+   +++     ++P      +NS++
Sbjct: 19  NLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSII 78

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD 103
            ++ KN     AL  Y  +R++    D +T P+++KACA +    +G  ++   +  G +
Sbjct: 79  RAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFE 138

Query: 104 GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
            D +V NAL+ MYS  G L  AR +FDEMP RD+VSW+++I GY   G  EEALE+  E+
Sbjct: 139 SDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198

Query: 164 RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCG 223
           +   I P    + S++  F ++  V  G+ +H   ++        V +   L+ MY K  
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK--SGVNSVVVVNNGLVAMYLKFR 256

Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLII 283
               A+++F+ ++    VS+  MI GY++   + E VR+F E +++   P  +T+ S++ 
Sbjct: 257 RPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLR 315

Query: 284 ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
            CG +  L L K+++ Y+L+ GF     + N L+D+Y KC ++ +AR +F+ M+ KD + 
Sbjct: 316 ACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS 375

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           WN++IS Y Q+  + +A +LF  M + + + + +T + L+S+ T    L+ GK LH+   
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI 435

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
           K G+ +D+ +  AL+DMYAKCG+V  + ++FS     D   WN +++     G     L 
Sbjct: 436 KSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQ 495

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL 523
               M +S V P+  TF+  L  C+       GK +   ++   G   +++    ++++ 
Sbjct: 496 VTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMY 554

Query: 524 GRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
            + G L+ +  + + M  R +++ W  ++ A  ++     GE A     ++E
Sbjct: 555 SKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALETFADME 602


>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
          Length = 778

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/593 (33%), Positives = 333/593 (56%), Gaps = 4/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSLV++ + N     A      M ++G  V+  ++ +IL AC        G  +HG  +
Sbjct: 188 WNSLVSALLTNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVL 247

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+    + NAL+ MY + G L S+ ++F+ M  ++ VSW++ I  +   G  E+ LE
Sbjct: 248 KFGLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLE 307

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R M   D+ P  V + S++    D+    LGK +H   +R   +    + IA  L+DM
Sbjct: 308 MFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESD--IFIANTLMDM 365

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G    A  +F  +   +VVSW  MI+   +     E  RL  EM +    P+  T+
Sbjct: 366 YAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTL 425

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           ++L+  C  V  +++GK +HA+ +R      L ++NAL+D+Y KC ++  AR +FD    
Sbjct: 426 VNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFD-RSE 484

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + +N +I  Y+Q+ C  ++  LF  M+++ +  + V+ +G LS C+   A + GK +
Sbjct: 485 KDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAFKQGKEI 544

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + K+ L+    L  +L+D+Y K G ++ A ++F+    +D+  WN M+ GYGMHG  
Sbjct: 545 HGVLVKRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILGYGMHGQI 604

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           + A   F  M+  G++ + +++I +L+ CSH GLV  GK  F +M+    + P+  HY C
Sbjct: 605 DVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGGLVDRGKKYFSQMI-AQNIKPQQMHYAC 663

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLLGRAG L E+ E+I++MP R N  VWGALL + ++H +  +  +AA  + E++P+N
Sbjct: 664 MVDLLGRAGQLSESAEIIRNMPFRANSDVWGALLGSCRIHGDIELARLAAEHLFELKPEN 723

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            GY  L+ N+Y+ +  WN+  GV+++MK  +V+K P +S V+    +  F+ G
Sbjct: 724 SGYYTLLRNMYSESGMWNEANGVKKLMKSRKVQKNPAYSWVQSGNKLQAFLVG 776



 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 159/545 (29%), Positives = 272/545 (49%), Gaps = 13/545 (2%)

Query: 18  AHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTI 77
           AH+I  H  F   +       +NSL  +      P  AL +Y  M ++G   D+ T P  
Sbjct: 66  AHLILRHHPFRLRSAF----LWNSLSRALASAALPCEALRVYNRMVRSGVRPDDRTFPFA 121

Query: 78  LKACAQVLMTH---LGKEIHGFAIKNGLD-GDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           L A A V        G E+H  A++ GL   D +  N L+  Y+ CG    AR +FDEMP
Sbjct: 122 LHAAAAVAQAEHPAKGAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMP 181

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
            RDVVSW++++      G+ E+A   +  M    +  +  +++S++       D   G  
Sbjct: 182 ARDVVSWNSLVSALLTNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLC 241

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           +H  V++   +    V +  AL+DMY K G+L  +  +FN + + + VSW   I  +   
Sbjct: 242 VHGLVLKFGLNSV--VNLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHA 299

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
               + + +F  M E +V P  +T+ SL+     +G   LGK LH Y +R   E  + +A
Sbjct: 300 GFHEDVLEMFRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIA 359

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           N L+DMY K      A  +F+ ++ ++V+ WNA+I+   Q     +AF L I M+ +   
Sbjct: 360 NTLMDMYAKFGCSEKASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGEC 419

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           PN  T+V LL  C+   +++MGK +H +  ++ L  D+ +  AL+D+YAKCG +N A  +
Sbjct: 420 PNSFTLVNLLPACSRVASVKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYI 479

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F  +  +D   +N ++ GY    C  E+L  F  M  +G++ + ++F+G L+ACS+    
Sbjct: 480 FDRS-EKDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSAF 538

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            +GK +   +V  L L         ++D+  + G+LD A ++   +  + ++  W  ++ 
Sbjct: 539 KQGKEIHGVLVKRL-LDSHPFLANSLLDVYTKGGMLDTASKIFNRIT-QKDVASWNTMIL 596

Query: 554 ASKLH 558
              +H
Sbjct: 597 GYGMH 601



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/433 (28%), Positives = 201/433 (46%), Gaps = 22/433 (5%)

Query: 83  QVLMTHLG-----KEIHGFAIKNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR- 135
            VL  H G     +  H  ++ +G L     ++ AL+  Y+    + SA  +    P R 
Sbjct: 18  HVLRLHCGGSLLLRRAHAASLVSGALTASFPLAGALLLSYAALPDIPSAHLILRHHPFRL 77

Query: 136 -DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD---LG 191
                W+++ R      LP EAL V   M    +RP +      +   A VA  +    G
Sbjct: 78  RSAFLWNSLSRALASAALPCEALRVYNRMVRSGVRPDDRTFPFALHAAAAVAQAEHPAKG 137

Query: 192 KAIHACVVRNCKDEKLGVAIA-----TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
             +HA  +R       G+ +A       L+  Y+ CG  A A+++F+ +    VVSW  +
Sbjct: 138 AELHAAALRR------GLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSL 191

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           +S  +    + +  R    M+   V  +  +++S++  CG       G  +H  +L+ G 
Sbjct: 192 VSALLTNGMLEDAKRAVVGMMRSGVPVNVASLVSILPACGTERDEGFGLCVHGLVLKFGL 251

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
              + + NALVDMYGK  ++ S+  +F+GM+ K+ + WN+ I  +A A   +   E+F  
Sbjct: 252 NSVVNLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEMFRL 311

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           M    V P  VT+  LL    + G   +GK LH Y  ++ +E D+ +   L+DMYAK G 
Sbjct: 312 MSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAKFGC 371

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
              A  +F     R++  WNAM+A    +G   EA    ++M+++G  PN  T + LL A
Sbjct: 372 SEKASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPA 431

Query: 487 CSHAGLVTEGKSV 499
           CS    V  GK +
Sbjct: 432 CSRVASVKMGKQI 444


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/593 (33%), Positives = 322/593 (54%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +++++   ++N++    L ++  M+  G  V      ++ ++CA +    LGKE+H  A+
Sbjct: 250 WSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHAL 309

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+    D  V  A + MY++CG +  A+ +   MP   + S++ +I GY R     +AL+
Sbjct: 310 KSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALK 369

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             + +    +   E+ +   ++  A +     G+ +H   V++       + +A A++DM
Sbjct: 370 SFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSN--ICVANAILDM 427

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC  LA A  LF+ + +   VSW  +I+   +     E +  FA MI   + P + T 
Sbjct: 428 YGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTY 487

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C     L  G  +H  I+++G  F   +  ALVDMY KC  I  A  + D  + 
Sbjct: 488 GSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQ 547

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K ++ WNA+IS ++     + A + F  M    V P+  T   +L  C     + +GK +
Sbjct: 548 KTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQI 607

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I KQ L+ DV + + LVDMY+KCG++  +  +F +A  RD   WNAM+ GY  HG G
Sbjct: 608 HAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLG 667

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           EEAL  F  M+   VKPN  TF+ +L AC+H GLV +G   FD M+   GL P+ EHY C
Sbjct: 668 EEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSC 727

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVD+LGR+G +DEA  +++ MP   + ++W  LL+  K+H N  + E A   +L+++PQ+
Sbjct: 728 MVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQD 787

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VL+SNIYA A  W +V+ +R++M+  ++KKEPG S +E+   VH F+ G
Sbjct: 788 SSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIELKDEVHAFLVG 840



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 153/561 (27%), Positives = 293/561 (52%), Gaps = 12/561 (2%)

Query: 26  KFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVL 85
           KF Y      +  +NS+++ +++N +   +++++  M + G   D  ++  +LKAC  + 
Sbjct: 136 KFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALE 195

Query: 86  MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIR 145
              +G ++HG  +K G D D    +AL+ MY++C  L  +  +F E+P ++ VSWS MI 
Sbjct: 196 ECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIA 255

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           G  +     E LE+ +EM+ + +  S+    S+    A ++ + LGK +H+  +++    
Sbjct: 256 GCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGS 315

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
              + + TA +DMY+KCG +A A+++ + + + S+ S+  +I GY R +   + ++ F  
Sbjct: 316 D--IIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQL 373

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           +++  +   EIT+   +  C  + G   G+ +H   +++    ++ +ANA++DMYGKC+ 
Sbjct: 374 LLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKA 433

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           +  A  LFD M+ +D + WNA+I+A  Q    ++    F  M  S++ P++ T   +L  
Sbjct: 434 LAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKA 493

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
           C    AL  G  +HT I K G+  D  +  ALVDMY KCG +  A ++      + +  W
Sbjct: 494 CAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSW 553

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           NA+++G+ +    E+A  FF  M   GV P+  T+  +L+ C++   V  GK +  +++ 
Sbjct: 554 NAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIK 613

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
              L   +     +VD+  + G + ++  M +  P R + + W A+L     H    +GE
Sbjct: 614 Q-ELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNR-DFVTWNAMLCGYAHH---GLGE 668

Query: 566 IA-----ATQILEIEPQNYGY 581
            A     + Q++ ++P +  +
Sbjct: 669 EALKLFESMQLVNVKPNHATF 689



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/556 (26%), Positives = 263/556 (47%), Gaps = 41/556 (7%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMY---------------- 116
           T   I + C++    + GK+ H   I  G +   +VSN L+QMY                
Sbjct: 51  TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110

Query: 117 ---------------SECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
                          + CG +  AR  F EMP RDVVSW+++I G+ + G   ++++V  
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
           EM    +     ++  ++     + + D+G  +H  VV+   D    V   +AL+ MY+K
Sbjct: 171 EMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFD--CDVVTGSALLGMYAK 228

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
           C  L  +  +F+ L + + VSW+ MI+G ++ +   EG+ LF EM    V  S+    SL
Sbjct: 229 CKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASL 288

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
              C  +  L+LGK LH++ L++ F   + +  A +DMY KC  +  A+ +   M    +
Sbjct: 289 FRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSL 348

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE-AGALEMGKWLHT 400
             +NA+I  YA++    +A + F  +  + +  +E+T+ G L+ C    G LE G+ +H 
Sbjct: 349 QSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLE-GRQVHG 407

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
              K     ++ +  A++DMY KC  +  A  LF     RD   WNA++A    +G  EE
Sbjct: 408 LAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEE 467

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCM 519
            L  F  M  S ++P+  T+  +L AC+    +  G  +  +++  G+G    +     +
Sbjct: 468 TLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVG--AAL 525

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQ 577
           VD+  + G++++A + I     +  M+ W A+++   L +         +++LE  + P 
Sbjct: 526 VDMYCKCGMIEKA-DKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPD 584

Query: 578 NYGYNVLMSNIYAVAN 593
           N+ Y  ++     +A 
Sbjct: 585 NFTYAAVLDTCANLAT 600



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 95/176 (53%)

Query: 16  CHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIP 75
           C   +I+   K         +  +N++++ +    +   A   ++ M + G   DNFT  
Sbjct: 530 CKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYA 589

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
            +L  CA +    LGK+IH   IK  L  D Y+ + L+ MYS+CG++  ++ +F++ PNR
Sbjct: 590 AVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNR 649

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           D V+W+ M+ GY   GL EEAL++   M+ ++++P+    +S++   A +  VD G
Sbjct: 650 DFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKG 705


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 207/574 (36%), Positives = 308/574 (53%), Gaps = 45/574 (7%)

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEM-------PNRDVVSWSTMIRGYHRGGL 152
           +G+  D    NA+I  Y++ G    A   F EM       PN  VVSW+ +I G  + G 
Sbjct: 285 SGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPN--VVSWTALIAGSEQNGY 342

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
             EAL V R+M    ++P+ + + S VS   +++ +  G+ IH   ++  ++    + + 
Sbjct: 343 DFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIK-VEELDSDLLVG 401

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM----IE 268
            +L+D Y+KC ++  A++ F  + Q  +VSW  M++GY       E + L +EM    IE
Sbjct: 402 NSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIE 461

Query: 269 ENVF-------------------------------PSEITILSLIIECGFVGGLQLGKWL 297
            ++                                P+  TI   +  CG V  L+LGK +
Sbjct: 462 PDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEI 521

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           H Y+LRN  E S  + +AL+ MY  C  +  A ++F  + ++DV++WN++ISA AQ+   
Sbjct: 522 HGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGRS 581

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
             A +L   M +S V  N VTMV  L  C++  AL  GK +H +I + GL+    +  +L
Sbjct: 582 VNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSL 641

Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
           +DMY +CG +  + R+F     RD+  WN M++ YGMHG G +A+  F      G+KPN 
Sbjct: 642 IDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNH 701

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK 537
           ITF  LL+ACSH+GL+ EG   F  M     + P +E Y CMVDLL RAG  +E  E I+
Sbjct: 702 ITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIE 761

Query: 538 SMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWND 597
            MP  PN  VWG+LL A ++H NP + E AA  + E+EPQ+ G  VLM+NIY+ A RW D
Sbjct: 762 KMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWED 821

Query: 598 VAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            A +R +MKE  V K PG S +EV   +H F+ G
Sbjct: 822 AAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVG 855



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/546 (24%), Positives = 252/546 (46%), Gaps = 82/546 (15%)

Query: 55  ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
            + ++  M   G   D+F  P + KAC+++    +GK+++ + +  G +G++ V  +++ 
Sbjct: 174 TIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILD 233

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           M+ +CG +  AR  F+E+  +DV  W+ M+ GY   G  ++AL+ + +M+   ++P +V 
Sbjct: 234 MFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVT 293

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
                                                  A+I  Y++ G    A + F  
Sbjct: 294 W-------------------------------------NAIISGYAQSGQFEEASKYFLE 316

Query: 235 LN-----QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           +      + +VVSWT +I+G  +     E + +F +M+ E V P+ ITI S +  C  + 
Sbjct: 317 MGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLS 376

Query: 290 GLQLGKWLHAYILR-NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
            L+ G+ +H Y ++    +  L + N+LVD Y KCR +  AR  F  +K  D++ WNA++
Sbjct: 377 LLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAML 436

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVR----------------------------------- 373
           + YA     ++A EL   MK   +                                    
Sbjct: 437 AGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMD 496

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           PN  T+ G L+ C +   L++GK +H Y+ +  +E+   + +AL+ MY+ C  +  A  +
Sbjct: 497 PNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSV 556

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           FSE   RD+ +WN++++     G    AL    +M  S V+ N +T +  L ACS    +
Sbjct: 557 FSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAAL 616

Query: 494 TEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
            +GK +   ++  GL     I     ++D+ GR G + ++  +   MP R +++ W  ++
Sbjct: 617 RQGKEIHQFIIRCGLDTCNFI--LNSLIDMYGRCGSIQKSRRIFDLMPQR-DLVSWNVMI 673

Query: 553 AASKLH 558
           +   +H
Sbjct: 674 SVYGMH 679



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 209/448 (46%), Gaps = 56/448 (12%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           +IL+ C ++    LG ++H   + NG+D   ++ + L+++Y + G +  AR +FD+M  R
Sbjct: 94  SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER 153

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
           +V SW+ ++  Y   G  EE +++   M    +RP       +    +++ +  +GK ++
Sbjct: 154 NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVY 213

Query: 196 ACVVRNCKDEKLGVA------IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
                   D  L +       +  +++DM+ KCG +  A++ F  +    V  W +M+SG
Sbjct: 214 --------DYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSG 265

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
           Y    E  + ++  ++M    V P ++T                  W             
Sbjct: 266 YTSKGEFKKALKCISDMKLSGVKPDQVT------------------W------------- 294

Query: 310 LAMANALVDMYGKCREIRSARTLF---DGMKS--KDVMIWNAVISAYAQAHCIDKAFELF 364
               NA++  Y +  +   A   F    G+K    +V+ W A+I+   Q     +A  +F
Sbjct: 295 ----NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVF 350

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY-IEKQGLEVDVILKTALVDMYAK 423
             M +  V+PN +T+   +S CT    L  G+ +H Y I+ + L+ D+++  +LVD YAK
Sbjct: 351 RKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAK 410

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
           C  V  A R F      D+  WNAM+AGY + G  EEA+    +M+  G++P+ IT+ GL
Sbjct: 411 CRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGL 470

Query: 484 LNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           +   +  G        F +M H +G+ P
Sbjct: 471 VTGFTQYGDGKAALEFFQRM-HSMGMDP 497



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 172/346 (49%), Gaps = 7/346 (2%)

Query: 14  RQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT 73
           R  H   I+   +  +  I   +  +N LVT + +     +AL  +  M   G + +  T
Sbjct: 442 RGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTT 501

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           I   L AC QV    LGKEIHG+ ++N ++    V +ALI MYS C SL  A  +F E+ 
Sbjct: 502 ISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELS 561

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
            RDVV W+++I    + G    AL+++REM   ++  + V M+S +   + +A +  GK 
Sbjct: 562 TRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKE 621

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           IH  ++R C  +     I  +LIDMY +CG++  ++++F+ + Q  +VSW VMIS Y   
Sbjct: 622 IHQFIIR-CGLDTCNF-ILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMH 679

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
               + V LF +     + P+ IT  +L+  C   G ++ G W +  +++  +    A+ 
Sbjct: 680 GFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEG-WKYFKMMKTEYAMDPAVE 738

Query: 314 N--ALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISAYAQAHC 356
               +VD+  +  +        + M    +  +W +++ A  + HC
Sbjct: 739 QYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA-CRIHC 783



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 205/445 (46%), Gaps = 43/445 (9%)

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMI--SMVSLFADVADVDLGKAIHACVVRNCKD- 204
           HR G+   A  ++  M   +  P E   I  S++     + ++ LG  +HA +V N  D 
Sbjct: 65  HRNGVLNNAAMLLSSMDLTN--PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDV 122

Query: 205 -EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
            E LG    + L+++Y + G +  A+++F+++++ +V SWT ++  Y    +  E ++LF
Sbjct: 123 CEFLG----SRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLF 178

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
             M+ E V P       +   C  +   ++GK ++ Y+L  GFE +  +  +++DM+ KC
Sbjct: 179 YLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKC 238

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
             +  AR  F+ ++ KDV +WN ++S Y       KA +    MK+S V+P++VT   ++
Sbjct: 239 GRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAII 298

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
           S   ++G  E       ++E  GL                            +    ++ 
Sbjct: 299 SGYAQSGQFEEAS--KYFLEMGGL----------------------------KDFKPNVV 328

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            W A++AG   +G   EAL  F  M   GVKPN IT    ++AC++  L+  G+ +    
Sbjct: 329 SWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYC 388

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN--P 561
           +    L   +     +VD   +   ++ A      M  + +++ W A+LA   L  +   
Sbjct: 389 IKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF-GMIKQTDLVSWNAMLAGYALRGSHEE 447

Query: 562 SMGEIAATQILEIEPQNYGYNVLMS 586
           ++  ++  +   IEP    +N L++
Sbjct: 448 AIELLSEMKFQGIEPDIITWNGLVT 472


>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g05240 [Vitis vinifera]
          Length = 565

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 205/562 (36%), Positives = 332/562 (59%), Gaps = 15/562 (2%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFD 130
           +I ++L+ C    M  L K +HG  I   +  D    + L+    YS+ G+L  A+ +F+
Sbjct: 7   SILSLLEKCKT--MAEL-KRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFN 63

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
           ++    +  W++MI+GY     P+EAL + REMR     P       ++   + V   +L
Sbjct: 64  QIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNL 123

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           G+ +H C+V+     ++ V  ATAL+ MY+ CG++  A ++F+ + + +VV+WT +I+G 
Sbjct: 124 GQCVHNCIVKT--GFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGC 181

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE--- 307
           I  +  +E VR++ +M   +V P+EIT++++++ C     L  G+W+H    + G +   
Sbjct: 182 ISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQ 241

Query: 308 ----FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
               F++ +A A+VDMY KC  +++AR LF+ M  ++++ WN++I AY Q    ++A +L
Sbjct: 242 SNSNFNVILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDL 301

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F  M+++   P++ T + ++  C   GAL  G+ LH Y+ K  L  D  + TALVDMYAK
Sbjct: 302 FSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAK 361

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM-ERSGVKPNGITFIG 482
            GD   A ++FSE   +D+  W +++ G  MHG GEEAL FF  M E + + P+ IT+IG
Sbjct: 362 SGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIG 421

Query: 483 LLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
           +L+ACSH G V +GK+ F  M +  G+ P  +HYGCMVDLL RAG L EA  +++ MP+ 
Sbjct: 422 VLSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVE 481

Query: 543 PNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVR 602
           PN  +W ALL   K+++N  + +    ++ E+E    G  VL+SNIYA A RW +V   R
Sbjct: 482 PNTAIWSALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKMAR 541

Query: 603 RVMKEIRVKKEPGFSSVEVNGL 624
            +MKE +++K  G SSVE+  L
Sbjct: 542 ELMKERKIQKSLGHSSVEMKML 563



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 137/435 (31%), Positives = 236/435 (54%), Gaps = 9/435 (2%)

Query: 26  KFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV 84
           K  +  I  P L  +NS++  Y  +  P  AL +Y  MR+ G   D+FT P +LKAC+ V
Sbjct: 59  KSVFNQIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLV 118

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
              +LG+ +H   +K G + D Y + AL+QMY+ CG + +A  +FD++P  +VV+W+++I
Sbjct: 119 NGYNLGQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLI 178

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
            G      P EA+ V ++M    + P+E+ M++++   A   D++ G+ +H    +   D
Sbjct: 179 AGCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLD 238

Query: 205 -----EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
                    V +ATA++DMY+KCG+L  A+ LFN++   ++V+W  MI  Y +  + NE 
Sbjct: 239 PFQSNSNFNVILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEA 298

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
           + LF++M      P + T L +I  C  +G L  G+ LHAY+ +       A+  ALVDM
Sbjct: 299 LDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDM 358

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV-SKVRPNEVT 378
           Y K  +   A+ +F  ++ KDV  W ++I   A     ++A   F  M+  + + P+E+T
Sbjct: 359 YAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEIT 418

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEK-QGLEVDVILKTALVDMYAKCGDVNGAYRLFSE- 436
            +G+LS C+  G +E GK     ++   G+E        +VD+ ++ G +  A RL  + 
Sbjct: 419 YIGVLSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKM 478

Query: 437 AIYRDICMWNAMMAG 451
            +  +  +W+A++ G
Sbjct: 479 PVEPNTAIWSALLNG 493


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 204/592 (34%), Positives = 346/592 (58%), Gaps = 18/592 (3%)

Query: 60  AFMRKNGSEVDN-FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSE 118
           +F+R+ G++V++ F +P IL+ C    +    ++IH   +K G   DA++   L+ +Y++
Sbjct: 59  SFIRE-GTKVESAFYVP-ILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYAK 116

Query: 119 CGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISM 178
           CG++ +AR +FDE+P R+VVSW+T++ GY     PE A++V REM      P+   + + 
Sbjct: 117 CGTMETARKVFDELPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTA 176

Query: 179 VSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
           +S  +D+   +LGK IH   ++     +   +I  +L  +YSKCG+L  A + F R+   
Sbjct: 177 LSASSDLHSKELGKQIHGYSIKY--RIEFDASIGNSLCSLYSKCGSLECAVKAFRRIRDK 234

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
           +V+SWT +IS +    E   G++ F EM+ E V P+E T+ S +  C  +  L +G  +H
Sbjct: 235 NVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIH 294

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ----- 353
           +  ++ GFE +L + N+++ +Y KC  I  A+ LFD M++  ++ WNA+I+ +A+     
Sbjct: 295 SLTIKLGFESNLPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFA 354

Query: 354 -----AH-CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
                AH C  +A  +F+ +  S ++P+  T   +LS+C+   ALE G+ +H    K G 
Sbjct: 355 KDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGF 414

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
             DV++ TALV+MY KCG +  A + F E   R +  W +M+ GY  +G  ++AL+ F D
Sbjct: 415 LSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFED 474

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           M  +GV+PN ITF+G+L+ACSHAG+V E    F  M +   + P ++HY C++D+  R G
Sbjct: 475 MRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLG 534

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNY-GYNVLMS 586
            LDEA + IK M L PN  +W  L+A  +      +G  AA Q+L ++P++   YN+L+ 
Sbjct: 535 RLDEAFDFIKEMDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLL- 593

Query: 587 NIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           N+Y  A +W +V+ VR++MKE ++ +   +S + +   ++ F R    + +S
Sbjct: 594 NMYLSAGKWKEVSRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQS 645



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 260/516 (50%), Gaps = 42/516 (8%)

Query: 14  RQCHAHIIKT-----HFKFSY--------------TNIINPLTRYN-----SLVTSYIKN 49
           ++ HAHI+KT      F  ++                + + L R N     +L+T Y+ +
Sbjct: 89  QKIHAHIVKTGAHKDAFLMTFLVNVYAKCGTMETARKVFDELPRRNVVSWTTLMTGYVHD 148

Query: 50  NKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVS 109
           +KP  A+ ++  M + G+   N+T+ T L A + +    LGK+IHG++IK  ++ DA + 
Sbjct: 149 SKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELGKQIHGYSIKYRIEFDASIG 208

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
           N+L  +YS+CGSL  A   F  + +++V+SW+T+I  +   G     L+   EM    + 
Sbjct: 209 NSLCSLYSKCGSLECAVKAFRRIRDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVE 268

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           P+E  + S +SL   +  +D+G  IH+  ++   +  L   I  +++ +Y KCG +  AK
Sbjct: 269 PNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESNL--PIKNSIMYLYLKCGWIHEAK 326

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEI-----------NEGVRLFAEMIEENVFPSEITI 278
           +LF+ +   S+V+W  MI+G+ R  +             E + +F ++    + P   T 
Sbjct: 327 KLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTF 386

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  L+ G+ +HA  ++ GF   + +  ALV+MY KC  I  A   F  M  
Sbjct: 387 SSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSI 446

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           + ++ W ++I+ YAQ     +A  LF  M+++ VRPN++T VG+LS C+ AG ++     
Sbjct: 447 RTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDY 506

Query: 399 HTYIEKQGLEVDVILKTA-LVDMYAKCGDVNGAYRLFSEA-IYRDICMWNAMMAGYGMHG 456
              ++ +     V+   A L+DM+ + G ++ A+    E  +  +  +W+ ++AG    G
Sbjct: 507 FQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQG 566

Query: 457 CGEEALIFFVDMERSGVKPNGI-TFIGLLNACSHAG 491
             E  L F+   +   +KP    T+  LLN    AG
Sbjct: 567 KLE--LGFYAAEQLLNLKPKDTETYNLLLNMYLSAG 600



 Score = 43.1 bits (100), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 89/233 (38%), Gaps = 47/233 (20%)

Query: 10  LEQTRQCHAHIIKTHF------------------------KFSYTNIINPLTRYNSLVTS 45
           LEQ  Q HA  IKT F                        K      I  L  + S++T 
Sbjct: 399 LEQGEQVHAQTIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITG 458

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI-----HGFAIKN 100
           Y +N +P  AL ++  MR  G   +  T   +L AC+   M     +      + + I  
Sbjct: 459 YAQNGQPQQALLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALDYFQMMKNEYKITP 518

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEM---PNRDVVSWSTMIRGYHRGGLPEEAL 157
            +D  A     LI M+   G L  A     EM   PN  +  WS +I G    G  E   
Sbjct: 519 VMDHYA----CLIDMFVRLGRLDEAFDFIKEMDLEPNEFI--WSILIAGCRSQGKLELGF 572

Query: 158 EVMREMRFMDIRPSEVAMIS-MVSLFADVADVDLGKAIHACVVRN-CKDEKLG 208
               ++  ++++P +    + +++++     +  GK      VR   K+EKLG
Sbjct: 573 YAAEQL--LNLKPKDTETYNLLLNMY-----LSAGKWKEVSRVRKMMKEEKLG 618


>gi|147769567|emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
          Length = 609

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 203/582 (34%), Positives = 330/582 (56%), Gaps = 4/582 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           + ++NS +T  +       AL ++  M++NG E +N T P++ KAC+++L     + +H 
Sbjct: 19  VAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACSKLLNLKYSQIVHT 78

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K+    D +V  +++ MY +C  L  A  LF  MP RDV SW++MI G+ + G  + 
Sbjct: 79  HVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIXGFAQLGFVDR 138

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            + +  EM    IR   V +I +      + D+ + ++IH+  ++   D    V+++   
Sbjct: 139 VVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDTD--VSVSNTW 196

Query: 216 IDMYSKCGNLAYAKQLFNRLNQ--NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           I  Y+KCG    A+ +F+ +++   + VSW  MI+GY    + ++ V  F +M+      
Sbjct: 197 IAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKKMLXGGFRA 256

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              TILSL+  C     L  GK +HA+ ++ G +  + + N L+ MY KC +I SAR LF
Sbjct: 257 DLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGDIGSARYLF 316

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           D M  K  + W A+I+  A+   +D+A  LF  M+    +P+ VT++ L+S C + GALE
Sbjct: 317 DNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSGCGQTGALE 376

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           +GKW+ TY    GL+ ++++  AL+D+YAKCG ++ A  LF     + +  W  ++AG  
Sbjct: 377 LGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSWTTLIAGCA 436

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
           ++G  +EAL  F  M   G+KPN ITF+ +L AC+HAG + +G   F+ M     + P +
Sbjct: 437 LNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTKVYKINPGL 496

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           +HY CM DLLGR G L EA E I++MP +P++ +W  LL+A K+H+N  +GE  A  + E
Sbjct: 497 DHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGECVAYHLFE 556

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPG 615
           +EPQ     V M+NIYA A +W+ VA +R +MK  +  K  G
Sbjct: 557 LEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAMKSSG 598



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/481 (27%), Positives = 232/481 (48%), Gaps = 38/481 (7%)

Query: 7   FLNLEQTRQCHAHIIKTHFK---FSYTNIIN---------------------PLTRYNSL 42
            LNL+ ++  H H++K+ F+   F  T++++                      +  +NS+
Sbjct: 67  LLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSM 126

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           +  + +       ++++  M   G   D+ T+  +  +   +    + + IH F IK G+
Sbjct: 127 IXGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGI 186

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPN--RDVVSWSTMIRGYHRGGLPEEALEVM 160
           D D  VSN  I  Y++CG    A  +FD +    +  VSW++MI GY       +A+   
Sbjct: 187 DTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFF 246

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALIDMY 219
           ++M     R     ++S++S       +  GK IHA  ++  C  +   + +   LI MY
Sbjct: 247 KKMLXGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSD---IQVINTLISMY 303

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
           SKCG++  A+ LF+ +   + VSWT MI+G     +++E + LF+ M      P  +TI+
Sbjct: 304 SKCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTII 363

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           SL+  CG  G L+LGKW+  Y   NG + +L + NAL+D+Y KC  + +AR LF  M  K
Sbjct: 364 SLMSGCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEK 423

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW-- 397
            ++ W  +I+  A      +A  LF  M    ++PN +T + +L  C  AG LE G W  
Sbjct: 424 SLVSWTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKG-WEC 482

Query: 398 --LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGM 454
             L T + K    +D    + + D+  + G +  A+       ++ D+ +W+ +++   +
Sbjct: 483 FNLMTKVYKINPGLDHY--SCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKI 540

Query: 455 H 455
           H
Sbjct: 541 H 541



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 177/366 (48%), Gaps = 11/366 (3%)

Query: 228 AKQLFNRL-NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
           A Q FNR  N  +V  W   I+  +     ++ + LF +M +  + P+ +T  S+   C 
Sbjct: 6   ATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVAKACS 65

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
            +  L+  + +H +++++ F+  L +  ++VDMY KC ++  A  LF  M  +DV  WN+
Sbjct: 66  KLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNS 125

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           +I  +AQ   +D+   LF  M +  +R + VT++GL         L+M + +H++  K G
Sbjct: 126 MIXGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIG 185

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFS--EAIYRDICMWNAMMAGYGMHGCGEEALIF 464
           ++ DV +    +  YAKCG+   A  +F   +   +    WN+M+AGY       +A+ F
Sbjct: 186 IDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGF 245

Query: 465 FVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL--GLVPKIEHYGCMVDL 522
           F  M   G + +  T + LL++C    ++  GK +     HG+  G    I+    ++ +
Sbjct: 246 FKKMLXGGFRADLSTILSLLSSCVQPEVLFHGKLIH---AHGIQVGCDSDIQVINTLISM 302

Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALLA--ASKLHKNPSMGEIAATQILEIEPQNYG 580
             + G +  A  +  +M L    + W A++A  A K   + +M   +A + +  +P    
Sbjct: 303 YSKCGDIGSARYLFDNM-LGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVT 361

Query: 581 YNVLMS 586
              LMS
Sbjct: 362 IISLMS 367


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 201/564 (35%), Positives = 324/564 (57%), Gaps = 7/564 (1%)

Query: 74  IPTILKACAQVLMTHLGKEIHG-FAIKNGLDGDAYVS--NALIQMYSECGSLVSARYLFD 130
           +  +LK  A       GK IH    ++N    D+ ++  N+LI +YS+CG    AR LFD
Sbjct: 26  VVNLLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFD 85

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVD 189
            M  R+VVSWS ++ GY   G   E L + R +  +D   P+E     ++S  AD   V 
Sbjct: 86  RMLQRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVK 145

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
            GK  H  ++++     L   +  ALI MYS+C ++  A Q+ + +  + V S+  ++S 
Sbjct: 146 EGKQCHGYLLKS--GLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSA 203

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
            +      E  ++   M++E V    +T +S++  C  +  LQLG  +HA +L+ G  F 
Sbjct: 204 LVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFD 263

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           + +++ L+D YGKC E+ +AR  FDG++ ++V+ W AV++AY Q    ++   LF  M++
Sbjct: 264 VFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMEL 323

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
              RPNE T   LL+ C    AL  G  LH  I   G +  +I+  AL++MY+K G+++ 
Sbjct: 324 EDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDS 383

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           +Y +FS  + RD+  WNAM+ GY  HG G++AL+ F DM  +G  PN +TFIG+L+AC H
Sbjct: 384 SYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVH 443

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP-LRPNMIVW 548
             LV EG   FD+++    + P +EHY CMV LLGRAGLLDEA   +K+   ++ +++ W
Sbjct: 444 LALVQEGFYYFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAW 503

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
             LL A  +H+N ++G+     +++++P + G   L+SN++A A +W+ V  +R++MKE 
Sbjct: 504 RTLLNACHIHRNYNLGKQITETVIQMDPHDVGTYTLLSNMHAKARKWDGVVKIRKLMKER 563

Query: 609 RVKKEPGFSSVEVNGLVHKFIRGG 632
            +KKEPG S +++    H F+  G
Sbjct: 564 NIKKEPGASWLDIRNNTHVFVSEG 587



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 211/421 (50%), Gaps = 6/421 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTI-LKACAQVLMTHLGKEIHGFA 97
           +++L+  Y+   +    L ++  +    S   N  I TI L  CA       GK+ HG+ 
Sbjct: 95  WSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYL 154

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K+GL    YV NALI MYS C  + SA  + D +P  DV S+++++      G   EA 
Sbjct: 155 LKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDTVPGDDVFSYNSILSALVESGCRGEAA 214

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           +V++ M    +    V  +S++ L A + D+ LG  IHA +++        V +++ LID
Sbjct: 215 QVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKT--GLVFDVFVSSTLID 272

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
            Y KCG +  A++ F+ L   +VV+WT +++ Y++     E + LF +M  E+  P+E T
Sbjct: 273 TYGKCGEVLNARKQFDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFT 332

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
              L+  C  +  L  G  LH  I+ +GF+  L + NAL++MY K   I S+  +F  M 
Sbjct: 333 FAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMM 392

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           ++DV+ WNA+I  Y+      +A  +F  M  +   PN VT +G+LS C     ++ G +
Sbjct: 393 NRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFY 452

Query: 398 LHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLF--SEAIYRDICMWNAMMAGYGM 454
               I K+  +E  +   T +V +  + G ++ A      +  +  D+  W  ++    +
Sbjct: 453 YFDQIMKKFDVEPGLEHYTCMVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHI 512

Query: 455 H 455
           H
Sbjct: 513 H 513



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 121/246 (49%), Gaps = 5/246 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++T+Y++N      LN++  M    +  + FT   +L ACA ++    G  +HG  +
Sbjct: 298 WTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIV 357

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +G      V NALI MYS+ G++ S+  +F  M NRDV++W+ MI GY   GL ++AL 
Sbjct: 358 MSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALL 417

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V ++M      P+ V  I ++S    +A V  G      +++   D + G+   T ++ +
Sbjct: 418 VFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKF-DVEPGLEHYTCMVAL 476

Query: 219 YSKCGNLAYAKQLFNRLNQN--SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
             + G L  A+       Q    VV+W  +++        N G ++   +I+ +  P ++
Sbjct: 477 LGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMD--PHDV 534

Query: 277 TILSLI 282
              +L+
Sbjct: 535 GTYTLL 540


>gi|225441321|ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 739

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 209/600 (34%), Positives = 338/600 (56%), Gaps = 13/600 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV-LMTHLGKEIHGFA 97
           +NS++ S++ +     AL  Y  MR+ G   D+FT P I +A   +      G+ +H  A
Sbjct: 117 WNSIIKSHVDSGLFGYALLQYGRMRELGVAHDSFTFPIINQAIWSLGCRVEYGETVHCVA 176

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K G   D Y  N ++++Y +CGS+ +A  LFDEM +RD+VSW+++I GY  G       
Sbjct: 177 MKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGYIYGESFSRGF 236

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           ++  +MR M++ P+ V M+ M+   +    V+ G+ +H+ V++  K   +  ++  +++ 
Sbjct: 237 KLFNKMR-MEMEPNSVTMVVMLQACSAFESVNEGRELHSYVIK--KGFMVDRSVQNSILR 293

Query: 218 MYSKCGNLAY-AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           MY+K G      +  F+ + +  ++SW ++I+ Y    +I E    F EM  E    S I
Sbjct: 294 MYTKTGGSGEEVETFFSEIEERDIISWNILIAFYSFRGDIAEVAERFNEMRRE--VTSSI 351

Query: 277 TILSLIIEC-GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
             L+L++        L  G  LH   ++ G   ++ M   L+ +Y KC  +  +  LF  
Sbjct: 352 ESLTLVVSAIANCANLSEGGMLHCSAIKTGLHDTVLMT-CLLALYAKCGALEISAQLFRD 410

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +  ++ + W++++S + Q     +A EL+  M  S ++PN   +  L+   T  GAL++G
Sbjct: 411 IPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLGALQLG 470

Query: 396 KWLHTY----IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           K  H +    +     E    L+T+L++MY +CG ++ A   F+  + +D+  W +M+ G
Sbjct: 471 KATHAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVVVKDVVTWTSMIEG 530

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           +G HG   EAL FF  M  S V+PN +TF+ LL+ACSH+GLV EG  VF  M  G  + P
Sbjct: 531 FGTHGLAFEALKFFKSMLESEVQPNSVTFLSLLSACSHSGLVREGCEVFHSMKWGFRIEP 590

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
            + HY CMVDLLGR+G L EA  +I  +   P+  +WGALLAAS++H++  +GE AA ++
Sbjct: 591 DLNHYTCMVDLLGRSGKLKEALTVILKLVTCPDSRIWGALLAASRVHEDKKLGEYAAEKL 650

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           LE+EP N GY  L SNI A   RW +V  VRRVM E  +KK+PG+S +EV G++H F+ G
Sbjct: 651 LELEPDNVGYYTLWSNIEASLERWGEVEEVRRVMHERDLKKKPGWSCIEVKGMIHGFVSG 710



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 132/526 (25%), Positives = 242/526 (46%), Gaps = 53/526 (10%)

Query: 71  NFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFD 130
           +F   ++L +C  +      K IH   I +       V++ LI +YS+     SA  + +
Sbjct: 51  SFPYSSLLHSCNNLQAL---KRIHASLIVSSGFQPLSVASKLITLYSQLNDFRSAFSICN 107

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
                + V W+++I+ +   GL   AL     +++  +R   VA  S      + A   L
Sbjct: 108 SFEEPNTVIWNSIIKSHVDSGLFGYAL-----LQYGRMRELGVAHDSFTFPIINQAIWSL 162

Query: 191 GKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
           G  +      +C   K+G    V     ++++Y KCG++  A +LF+ +    +VSWT +
Sbjct: 163 GCRVEYGETVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSI 222

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           ISGYI     + G +LF +M  E + P+ +T++ ++  C     +  G+ LH+Y+++ GF
Sbjct: 223 ISGYIYGESFSRGFKLFNKMRME-MEPNSVTMVVMLQACSAFESVNEGRELHSYVIKKGF 281

Query: 307 EFSLAMANALVDMYGKC-REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
               ++ N+++ MY K         T F  ++ +D++ WN +I+ Y+    I +  E F 
Sbjct: 282 MVDRSVQNSILRMYTKTGGSGEEVETFFSEIEERDIISWNILIAFYSFRGDIAEVAERFN 341

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            M+  +V  +  ++  ++S       L  G  LH    K GL  D +L T L+ +YAKCG
Sbjct: 342 EMR-REVTSSIESLTLVVSAIANCANLSEGGMLHCSAIKTGLH-DTVLMTCLLALYAKCG 399

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
            +  + +LF +  +R+   W++MM+G+  +G  +EA+  +  M  SG++PN      L+ 
Sbjct: 400 ALEISAQLFRDIPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVI 459

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPK--------------------------------- 512
           A +H G +  GK+     +  L   P+                                 
Sbjct: 460 AYTHLGALQLGKATHAFFIRNLSSWPEEDSAPLETSLLNMYIRCGSISSALICFNRVVVK 519

Query: 513 -IEHYGCMVDLLGRAGLLDEAHEMIKSM---PLRPNMIVWGALLAA 554
            +  +  M++  G  GL  EA +  KSM    ++PN + + +LL+A
Sbjct: 520 DVVTWTSMIEGFGTHGLAFEALKFFKSMLESEVQPNSVTFLSLLSA 565


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 217/625 (34%), Positives = 343/625 (54%), Gaps = 12/625 (1%)

Query: 12   QTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN 71
            Q +Q  A+  K  F +   +  + +  +N  ++ +++  +   A++ +  M  +    D 
Sbjct: 848  QLKQLKAYGTKL-FMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDG 906

Query: 72   FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE 131
             T   +L   A +    LGK+IHG  +++GLD    V N LI MY + GS+  AR +F +
Sbjct: 907  LTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQ 966

Query: 132  MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD-VDL 190
            M   D+VSW+TMI G    GL E ++ +  ++    + P +  + S++   + +     L
Sbjct: 967  MNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHL 1026

Query: 191  GKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
               IHAC +      K GV     ++T LID+YSK G +  A+ LF   +   + SW  M
Sbjct: 1027 ATQIHACAM------KAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAM 1080

Query: 247  ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
            + GYI   +  + +RL+  M E     ++IT+ +     G + GL+ GK + A +++ GF
Sbjct: 1081 MHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGF 1140

Query: 307  EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
               L + + ++DMY KC E+ SAR +F+ + S D + W  +IS   +    + A   + H
Sbjct: 1141 NLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHH 1200

Query: 367  MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
            M++SKV+P+E T   L+  C+   ALE G+ +H    K     D  + T+LVDMYAKCG+
Sbjct: 1201 MRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGN 1260

Query: 427  VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
            +  A  LF       I  WNAM+ G   HG  EEAL FF +M+  GV P+ +TFIG+L+A
Sbjct: 1261 IEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSA 1320

Query: 487  CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
            CSH+GLV+E    F  M    G+ P+IEHY C+VD L RAG + EA ++I SMP   +  
Sbjct: 1321 CSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASAS 1380

Query: 547  VWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMK 606
            ++  LL A ++  +   G+  A ++L +EP +    VL+SN+YA AN+W +VA  R +M+
Sbjct: 1381 MYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMR 1440

Query: 607  EIRVKKEPGFSSVEVNGLVHKFIRG 631
            +  VKK+PGFS V++   VH F+ G
Sbjct: 1441 KANVKKDPGFSWVDLKNKVHLFVAG 1465



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 136/559 (24%), Positives = 263/559 (47%), Gaps = 44/559 (7%)

Query: 36   LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
            L  +N++++++   +K     +++  +R++       T+  + K C         + +HG
Sbjct: 694  LVTWNAILSAHA--DKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHG 751

Query: 96   FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            +A+K GL  D +V+ AL+ +Y++ G +  AR LFD M  RDVV W+ M++ Y   GL  E
Sbjct: 752  YAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYE 811

Query: 156  ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            AL +  E     +RP +V + ++  +          K+    +    K  K         
Sbjct: 812  ALLLFSEFNRTGLRPDDVTLCTLARVV---------KSKQNVLEWQLKQLK--------- 853

Query: 216  IDMYSKCGNLAYAKQLF---NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
                      AY  +LF   +  + + V++W   +S +++  E  E V  F +MI   V 
Sbjct: 854  ----------AYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVA 903

Query: 273  PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
               +T + ++     +  L+LGK +H  ++R+G +  +++ N L++MY K   +  ART+
Sbjct: 904  CDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTV 963

Query: 333  FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE-AGA 391
            F  M   D++ WN +IS  A +   + +  +F+ +    + P++ T+  +L  C+   G 
Sbjct: 964  FWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGG 1023

Query: 392  LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
              +   +H    K G+ +D  + T L+D+Y+K G +  A  LF      D+  WNAMM G
Sbjct: 1024 CHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHG 1083

Query: 452  YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT---EGKSVFDKMVHGLG 508
            Y + G   +AL  ++ M+ SG + N IT   L NA   AG +    +GK +   +V   G
Sbjct: 1084 YIVSGDFPKALRLYILMQESGERANQIT---LANAAKAAGGLVGLKQGKQI-QAVVVKRG 1139

Query: 509  LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA--SKLHKNPSMGEI 566
                +     ++D+  + G ++ A  +   +P  P+ + W  +++       +  ++   
Sbjct: 1140 FNLDLFVISGVLDMYLKCGEMESARRIFNEIP-SPDDVAWTTMISGCVENGQEEHALFTY 1198

Query: 567  AATQILEIEPQNYGYNVLM 585
               ++ +++P  Y +  L+
Sbjct: 1199 HHMRLSKVQPDEYTFATLV 1217



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 211/457 (46%), Gaps = 51/457 (11%)

Query: 89   LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN--RDVVSWSTMIRG 146
            LGK  H   + +G   D +++N LI MYS+CGSL SAR LFD  P+  RD+V+W+ ++  
Sbjct: 644  LGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVTWNAILSA 703

Query: 147  YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
            +       +   + R +R   +  +   +  +  +    A     +++H   V      K
Sbjct: 704  H--ADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAV------K 755

Query: 207  LG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
            +G    V +A AL+++Y+K G +  A+ LF+ +    VV W VM+  Y+      E + L
Sbjct: 756  IGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLL 815

Query: 263  FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
            F+E     + P ++T+ +L      V   Q           N  E+ L    A    YG 
Sbjct: 816  FSEFNRTGLRPDDVTLCTL---ARVVKSKQ-----------NVLEWQLKQLKA----YGT 857

Query: 323  CREIRSARTLF---DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
                     LF   D     DV+ WN  +S + Q     +A + F+ M  S+V  + +T 
Sbjct: 858  --------KLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTF 909

Query: 380  VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
            V +LS+      LE+GK +H  + + GL+  V +   L++MY K G V+ A  +F +   
Sbjct: 910  VVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNE 969

Query: 440  RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
             D+  WN M++G  + G  E ++  FVD+ R G+ P+  T   +L ACS  G    G   
Sbjct: 970  VDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLG----GGCH 1025

Query: 500  FDKMVHG----LGLVPKIEHYGCMVDLLGRAGLLDEA 532
                +H      G+V        ++D+  ++G ++EA
Sbjct: 1026 LATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEA 1062



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 176/375 (46%), Gaps = 31/375 (8%)

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS--VVS 242
            +D+ LGK  HA ++ +         +   LI MYSKCG+L+ A++LF+     S  +V+
Sbjct: 639 ASDLPLGKRAHARILTSGHHPDR--FLTNNLITMYSKCGSLSSARKLFDTTPDTSRDLVT 696

Query: 243 WTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYIL 302
           W  ++S +   ++  +G  LF  +    V  +  T+  +   C         + LH Y +
Sbjct: 697 WNAILSAH--ADKARDGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAV 754

Query: 303 RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
           + G ++ + +A ALV++Y K   IR AR LFDGM  +DV++WN ++ AY       +A  
Sbjct: 755 KIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALL 814

Query: 363 LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYA 422
           LF     + +RP++VT      LCT A  ++  + +  +  KQ       LK     ++ 
Sbjct: 815 LFSEFNRTGLRPDDVT------LCTLARVVKSKQNVLEWQLKQ-------LKAYGTKLFM 861

Query: 423 KCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
              D +G+          D+  WN  ++ +   G   EA+  FVDM  S V  +G+TF+ 
Sbjct: 862 YDDDDDGS----------DVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVV 911

Query: 483 LLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
           +L+  +    +  GK +   +V   GL   +    C++++  + G +  A  +   M   
Sbjct: 912 MLSVVAGLNCLELGKQIHGIVVRS-GLDQVVSVGNCLINMYVKTGSVSRARTVFWQMN-E 969

Query: 543 PNMIVWGALLAASKL 557
            +++ W  +++   L
Sbjct: 970 VDLVSWNTMISGCAL 984


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 213/620 (34%), Positives = 339/620 (54%), Gaps = 29/620 (4%)

Query: 39   YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM-THLGKEIHGFA 97
            +NS++ +  +  +   +L+++  M     +  +FT+ ++  AC+ V     LGK++H + 
Sbjct: 401  WNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYT 460

Query: 98   IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
            ++NG D   Y +NAL+ MY+  G +  A+ LF     +D+VSW+T+I    +    EEAL
Sbjct: 461  LRNG-DLRTYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEAL 519

Query: 158  EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
              +  M    +RP  V + S++   + +  + +G+ IH   +RN  D      + TAL+D
Sbjct: 520  MYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRN-GDLIENSFVGTALVD 578

Query: 218  MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF-PSEI 276
            MY  C      + +F+ + + +V  W  +++GY R    ++ +RLF EMI E+ F P+  
Sbjct: 579  MYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNAT 638

Query: 277  TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
            T  S++  C         + +H YI++ GF     + NAL+DMY +   +  ++T+F  M
Sbjct: 639  TFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRM 698

Query: 337  KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK------------------VRPNEVT 378
              +D++ WN +I+        D A  L   M+  +                   +PN VT
Sbjct: 699  NKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVT 758

Query: 379  MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
            ++ +L  C    AL  GK +H Y  KQ L +DV + +ALVDMYAKCG +N A R+F +  
Sbjct: 759  LMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMP 818

Query: 439  YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG------VKPNGITFIGLLNACSHAGL 492
             R++  WN ++  YGMHG GEEAL  F  M   G      ++PN +T+I +  ACSH+G+
Sbjct: 819  IRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGM 878

Query: 493  VTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI-VWGAL 551
            V EG  +F  M    G+ P+ +HY C+VDLLGR+G + EA+E+I +MP   N +  W +L
Sbjct: 879  VDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSL 938

Query: 552  LAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVK 611
            L A ++H++   GEIAA  +  +EP    + VLMSNIY+ A  W+   GVR+ MKE+ V+
Sbjct: 939  LGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVR 998

Query: 612  KEPGFSSVEVNGLVHKFIRG 631
            KEPG S +E    VHKF+ G
Sbjct: 999  KEPGCSWIEHGDEVHKFLSG 1018



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 172/546 (31%), Positives = 271/546 (49%), Gaps = 30/546 (5%)

Query: 37  TRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGF 96
           +++  L+ S   ++    A++ YA M    +  DNF  P +LKA A V    LGK+IH  
Sbjct: 296 SQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQIHAH 355

Query: 97  AIKNG--LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
             K G        V+N+L+ MY +CG L +AR +FD++P+RD VSW++MI    R    E
Sbjct: 356 VFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWE 415

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADV-ADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            +L + R M   ++ P+   ++S+    + V   V LGK +HA  +RN     L      
Sbjct: 416 LSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRN---GDLRTYTNN 472

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+ MY++ G +  AK LF   +   +VSW  +IS   + +   E +     MI + V P
Sbjct: 473 ALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRP 532

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNG--FEFSLAMANALVDMYGKCREIRSART 331
             +T+ S++  C  +  L++G+ +H Y LRNG   E S  +  ALVDMY  C++ +  R 
Sbjct: 533 DGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSF-VGTALVDMYCNCKQPKKGRL 591

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAG 390
           +FDG+  + V +WNA+++ YA+    D+A  LF+ M   S+  PN  T   +L  C    
Sbjct: 592 VFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCK 651

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
                + +H YI K+G   D  ++ AL+DMY++ G V  +  +F     RDI  WN M+ 
Sbjct: 652 VFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMIT 711

Query: 451 GYGMHG---------------CGEEALIFFVDMERSG---VKPNGITFIGLLNACSHAGL 492
           G  + G                GE+    FVD E  G    KPN +T + +L  C+    
Sbjct: 712 GCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAA 771

Query: 493 VTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           + +GK +    V    L   +     +VD+  + G L+ A  +   MP+R N+I W  L+
Sbjct: 772 LGKGKEIHAYAVKQ-KLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIR-NVITWNVLI 829

Query: 553 AASKLH 558
            A  +H
Sbjct: 830 MAYGMH 835



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 212/424 (50%), Gaps = 8/424 (1%)

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           R    W  ++R         +A+     M      P   A  +++   A V D+ LGK I
Sbjct: 293 RSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQI 352

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
           HA V +        VA+A +L++MY KCG+L  A+Q+F+ +     VSW  MI+   R  
Sbjct: 353 HAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRFE 412

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFV-GGLQLGKWLHAYILRNGFEFSLAMA 313
           E    + LF  M+ ENV P+  T++S+   C  V GG++LGK +HAY LRNG +      
Sbjct: 413 EWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYTN 471

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           NALV MY +   +  A+ LF     KD++ WN VIS+ +Q    ++A      M V  VR
Sbjct: 472 NALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGVR 531

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG-LEVDVILKTALVDMYAKCGDVNGAYR 432
           P+ VT+  +L  C++   L +G+ +H Y  + G L  +  + TALVDMY  C        
Sbjct: 532 PDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGRL 591

Query: 433 LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM-ERSGVKPNGITFIGLLNACSHAG 491
           +F   + R + +WNA++AGY  +   ++AL  FV+M   S   PN  TF  +L AC    
Sbjct: 592 VFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRCK 651

Query: 492 LVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           + ++ + +   +V  G G    +++   ++D+  R G ++ +  +   M  R +++ W  
Sbjct: 652 VFSDKEGIHGYIVKRGFGKDKYVQN--ALMDMYSRMGRVEISKTIFGRMNKR-DIVSWNT 708

Query: 551 LLAA 554
           ++  
Sbjct: 709 MITG 712



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 243/504 (48%), Gaps = 46/504 (9%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N++++S  +N++   AL     M  +G   D  T+ ++L AC+Q+    +G+EIH 
Sbjct: 499 LVSWNTVISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHC 558

Query: 96  FAIKNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           +A++NG L  +++V  AL+ MY  C      R +FD +  R V  W+ ++ GY R    +
Sbjct: 559 YALRNGDLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDD 618

Query: 155 EALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAI 211
           +AL +  EM    +  P+     S++            + IH  +V+    KD+     +
Sbjct: 619 QALRLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDK----YV 674

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-- 269
             AL+DMYS+ G +  +K +F R+N+  +VSW  MI+G I C   ++ + L  EM     
Sbjct: 675 QNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQG 734

Query: 270 ----NVF------------PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
               + F            P+ +T+++++  C  +  L  GK +HAY ++      +A+ 
Sbjct: 735 EDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVG 794

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-- 371
           +ALVDMY KC  +  A  +FD M  ++V+ WN +I AY      ++A ELF  M      
Sbjct: 795 SALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGS 854

Query: 372 ----VRPNEVTMVGLLSLCTEAGALEMGKWL-HTYIEKQGLEVDVILKTALVDMYAKCGD 426
               +RPNEVT + + + C+ +G ++ G  L HT     G+E        LVD+  + G 
Sbjct: 855 NREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGR 914

Query: 427 VNGAYRLFS--EAIYRDICMWNAMMAGYGMHGCGEEALI----FFVDMERSGVKPNGIT- 479
           V  AY L +   +    +  W++++    +H   E   I     FV      ++PN  + 
Sbjct: 915 VKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFV------LEPNVASH 968

Query: 480 FIGLLNACSHAGLVTEGKSVFDKM 503
           ++ + N  S AGL  +   V  KM
Sbjct: 969 YVLMSNIYSSAGLWDQALGVRKKM 992



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 153/323 (47%), Gaps = 5/323 (1%)

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           + + S   W  ++      +   + +  +A M+     P      +++     V  L LG
Sbjct: 290 VERRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLG 349

Query: 295 KWLHAYILRNGF--EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
           K +HA++ + G     S+A+AN+LV+MYGKC ++ +AR +FD +  +D + WN++I+   
Sbjct: 350 KQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLC 409

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA-GALEMGKWLHTYIEKQGLEVDV 411
           +    + +  LF  M    V P   T+V +   C+   G + +GK +H Y  + G ++  
Sbjct: 410 RFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRT 468

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
               ALV MYA+ G VN A  LF     +D+  WN +++    +   EEAL++   M   
Sbjct: 469 YTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVD 528

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
           GV+P+G+T   +L ACS    +  G+ +    +    L+        +VD+        +
Sbjct: 529 GVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKK 588

Query: 532 AHEMIKSMPLRPNMIVWGALLAA 554
              +   + +R  + VW ALLA 
Sbjct: 589 GRLVFDGV-VRRTVAVWNALLAG 610


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 210/575 (36%), Positives = 307/575 (53%), Gaps = 47/575 (8%)

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEM-------PNRDVVSWSTMIRGYHRGGL 152
           +G+  D    NA+I  Y++ G    A   F EM       PN  VVSW+ +I G  + G 
Sbjct: 285 SGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPN--VVSWTALIAGSEQNGY 342

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAI 211
             EAL V R+M    ++P+ + + S VS   +++ +  G+ IH  C+     D  L   +
Sbjct: 343 DFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDL--LV 400

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM----I 267
             +L+D Y+KC ++  A++ F  + Q  +VSW  M++GY       E + L +EM    I
Sbjct: 401 GNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGI 460

Query: 268 EENVF-------------------------------PSEITILSLIIECGFVGGLQLGKW 296
           E ++                                P+  TI   +  CG V  L+LGK 
Sbjct: 461 EPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKE 520

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           +H Y+LRN  E S  + +AL+ MY  C  +  A ++F  + ++DV++WN++ISA AQ+  
Sbjct: 521 IHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSIISACAQSGR 580

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
              A +L   M +S V  N VTMV  L  C++  AL  GK +H +I + GL+    +  +
Sbjct: 581 SVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNS 640

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           L+DMY +CG +  + R+F     RD+  WN M++ YGMHG G +A+  F      G+KPN
Sbjct: 641 LIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPN 700

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
            ITF  LL+ACSH+GL+ EG   F  M     + P +E Y CMVDLL RAG  +E  E I
Sbjct: 701 HITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFI 760

Query: 537 KSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWN 596
           + MP  PN  VWG+LL A ++H NP + E AA  + E+EPQ+ G  VLM+NIY+ A RW 
Sbjct: 761 EKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWE 820

Query: 597 DVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           D A +R +MKE  V K PG S +EV   +H F+ G
Sbjct: 821 DAAKIRCLMKERGVTKPPGCSWIEVKRKLHSFVVG 855



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/546 (24%), Positives = 252/546 (46%), Gaps = 82/546 (15%)

Query: 55  ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
            + ++  M   G   D+F  P + KAC+++    +GK+++ + +  G +G++ V  +++ 
Sbjct: 174 TIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILD 233

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           M+ +CG +  AR  F+E+  +DV  W+ M+ GY   G  ++AL+ + +M+   ++P +V 
Sbjct: 234 MFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVT 293

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
                                                  A+I  Y++ G    A + F  
Sbjct: 294 W-------------------------------------NAIISGYAQSGQFEEASKYFLE 316

Query: 235 LN-----QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           +      + +VVSWT +I+G  +     E + +F +M+ E V P+ ITI S +  C  + 
Sbjct: 317 MGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLS 376

Query: 290 GLQLGKWLHAYILR-NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
            L+ G+ +H Y ++    +  L + N+LVD Y KCR +  AR  F  +K  D++ WNA++
Sbjct: 377 LLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAML 436

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVR----------------------------------- 373
           + YA     ++A EL   MK   +                                    
Sbjct: 437 AGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMD 496

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           PN  T+ G L+ C +   L++GK +H Y+ +  +E+   + +AL+ MY+ C  +  A  +
Sbjct: 497 PNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSV 556

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           FSE   RD+ +WN++++     G    AL    +M  S V+ N +T +  L ACS    +
Sbjct: 557 FSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAAL 616

Query: 494 TEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
            +GK +   ++  GL     I     ++D+ GR G + ++  +   MP R +++ W  ++
Sbjct: 617 RQGKEIHQFIIRCGLDTCNFI--LNSLIDMYGRCGSIQKSRRIFDLMPQR-DLVSWNVMI 673

Query: 553 AASKLH 558
           +   +H
Sbjct: 674 SVYGMH 679



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 209/448 (46%), Gaps = 56/448 (12%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           +IL+ C ++    LG ++H   + NG+D   ++ + L+++Y + G +  AR +FD+M  R
Sbjct: 94  SILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSER 153

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
           +V SW+ ++  Y   G  EE +++   M    +RP       +    +++ +  +GK ++
Sbjct: 154 NVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVY 213

Query: 196 ACVVRNCKDEKLGVA------IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
                   D  L +       +  +++DM+ KCG +  A++ F  +    V  W +M+SG
Sbjct: 214 --------DYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSG 265

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
           Y    E  + ++  ++M    V P ++T                  W             
Sbjct: 266 YTSKGEFKKALKCISDMKLSGVKPDQVT------------------W------------- 294

Query: 310 LAMANALVDMYGKCREIRSARTLF---DGMKS--KDVMIWNAVISAYAQAHCIDKAFELF 364
               NA++  Y +  +   A   F    G+K    +V+ W A+I+   Q     +A  +F
Sbjct: 295 ----NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVF 350

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY-IEKQGLEVDVILKTALVDMYAK 423
             M +  V+PN +T+   +S CT    L  G+ +H Y I+ + L+ D+++  +LVD YAK
Sbjct: 351 RKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAK 410

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
           C  V  A R F      D+  WNAM+AGY + G  EEA+    +M+  G++P+ IT+ GL
Sbjct: 411 CRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGL 470

Query: 484 LNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           +   +  G        F +M H +G+ P
Sbjct: 471 VTGFTQYGDGKAALEFFQRM-HSMGMDP 497



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 171/346 (49%), Gaps = 7/346 (2%)

Query: 14  RQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT 73
           R  H   I+   +  +  I   +  +N LVT + +     +AL  +  M   G + +  T
Sbjct: 442 RGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTT 501

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           I   L AC QV    LGKEIHG+ ++N ++    V +ALI MYS C SL  A  +F E+ 
Sbjct: 502 ISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELS 561

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
            RDVV W+++I    + G    AL+++REM   ++  + V M+S +   + +A +  GK 
Sbjct: 562 TRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKE 621

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           IH  ++R C  +     I  +LIDMY +CG++  ++++F+ + Q  +VSW VMIS Y   
Sbjct: 622 IHQFIIR-CGLDTCNF-ILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMH 679

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
               + V LF       + P+ IT  +L+  C   G ++ G W +  +++  +    A+ 
Sbjct: 680 GFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEG-WKYFKMMKTEYAMDPAVE 738

Query: 314 N--ALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISAYAQAHC 356
               +VD+  +  +        + M    +  +W +++ A  + HC
Sbjct: 739 QYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGA-CRIHC 783



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 205/445 (46%), Gaps = 43/445 (9%)

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMI--SMVSLFADVADVDLGKAIHACVVRNCKD- 204
           HR G+   A  ++  M   +  P E   I  S++     + ++ LG  +HA +V N  D 
Sbjct: 65  HRNGVLNNAAMLLSSMDLTN--PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDV 122

Query: 205 -EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
            E LG    + L+++Y + G +  A+++F+++++ +V SWT ++  Y    +  E ++LF
Sbjct: 123 CEFLG----SRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLF 178

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
             M+ E V P       +   C  +   ++GK ++ Y+L  GFE +  +  +++DM+ KC
Sbjct: 179 YLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKC 238

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
             +  AR  F+ ++ KDV +WN ++S Y       KA +    MK+S V+P++VT   ++
Sbjct: 239 GRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAII 298

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
           S   ++G  E       ++E  GL                            +    ++ 
Sbjct: 299 SGYAQSGQFEEAS--KYFLEMGGL----------------------------KDFKPNVV 328

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            W A++AG   +G   EAL  F  M   GVKPN IT    ++AC++  L+  G+ +    
Sbjct: 329 SWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYC 388

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN--P 561
           +    L   +     +VD   +   ++ A      M  + +++ W A+LA   L  +   
Sbjct: 389 IKVEELDSDLLVGNSLVDYYAKCRSVEVARRKF-GMIKQTDLVSWNAMLAGYALRGSHEE 447

Query: 562 SMGEIAATQILEIEPQNYGYNVLMS 586
           ++  ++  +   IEP    +N L++
Sbjct: 448 AIELLSEMKFQGIEPDIITWNGLVT 472


>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
          Length = 644

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 212/618 (34%), Positives = 339/618 (54%), Gaps = 31/618 (5%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           + LV S  K  +   AL+I   M +NG    + T  ++L+ C         K +H   I+
Sbjct: 33  DGLVKSLCKQGRLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQ 92

Query: 100 NGLD-GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
              +  D  + N L+ +Y + GSLV AR +FDEMP ++VVSW+ MI  Y R    +EAL 
Sbjct: 93  TQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALG 152

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
              EM+ + I+P+     +  S+     D+++    H  +V+   +    V +   L+DM
Sbjct: 153 FFYEMQDVGIQPNH---FTFASILPACTDLEVLGEFHDEIVKGGFESN--VFVGNGLVDM 207

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G + +A++LF+++ Q  VVSW  MI+GY++   I + ++LF E+ + +V     T+
Sbjct: 208 YAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWN-TM 266

Query: 279 LSLIIECGFV-----------------------GGLQLGKWLHAYILRNGF-EFSLAMAN 314
           ++   +CG V                       G +Q G    A+ L     E ++   N
Sbjct: 267 MAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWN 326

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
           A++  + +  ++  A  LF  M   +V+ WNA+I+ Y+Q    + A +LF  M++  ++P
Sbjct: 327 AVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKP 386

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           N  T   +L  C     LE G   H  + + G + DV++   LV MYAKCG +  A ++F
Sbjct: 387 NTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVF 446

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
                +D    +AM+ GY ++GC +E+L  F  M+ +G+KP+ +TF+G+L+AC HAGLV 
Sbjct: 447 DRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVD 506

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           EG+  FD M     + P +EHYGCM+DLLGRAG  DEA+++I  MP++P+  +WG+LL+A
Sbjct: 507 EGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSA 566

Query: 555 SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEP 614
            + H N  +GE  A  ++ + PQN    VL+SNIYA A RW+D+  VR  MK+ +VKK+ 
Sbjct: 567 CRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVRNRMKDRKVKKKL 626

Query: 615 GFSSVEVNGLVHKFIRGG 632
           G S + +   VH F+ GG
Sbjct: 627 GCSWIVIKKQVHAFLVGG 644



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 144/547 (26%), Positives = 257/547 (46%), Gaps = 60/547 (10%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTNIINPLTR-------------------------YNSLV 43
           +L   +  HAH+I+T F+    ++ N L                           + +++
Sbjct: 79  SLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMI 138

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD 103
            +Y ++     AL  +  M+  G + ++FT  +IL AC  + +  LG E H   +K G +
Sbjct: 139 AAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEV--LG-EFHDEIVKGGFE 195

Query: 104 GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
            + +V N L+ MY++ G +  AR LFD+MP RDVVSW+ MI GY + GL E+AL++ +E+
Sbjct: 196 SNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEI 255

Query: 164 RFMDIRPSEVAMI---------SMVSLFADVADVDL-------------GKAIHACVVRN 201
              D+      M          + V LF  + + +L             G    A  +  
Sbjct: 256 PKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLFQ 315

Query: 202 CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVR 261
              E+  V    A+I  +++ G +  A +LF  + + +VVSW  MI+GY +  +    ++
Sbjct: 316 IMPER-NVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALK 374

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           LF +M   ++ P+  T   ++  C  +  L+ G   H  ++R+GF+  + + N LV MY 
Sbjct: 375 LFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYA 434

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           KC  I  AR +FD M+ +D    +A+I  YA   C  ++ ELF  M+ + ++P+ VT VG
Sbjct: 435 KCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVG 494

Query: 382 LLSLCTEAGALEMGKWLHTYIEK-QGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIY 439
           +LS C  AG ++ G+     + +   +   +     ++D+  + G  + A  L ++  I 
Sbjct: 495 VLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIK 554

Query: 440 RDICMWNAMMAGYGMHG---CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
            D  MW ++++    H     GE+     + +      P    ++ L N  + AG   + 
Sbjct: 555 PDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAP----YVLLSNIYAAAGRWDDI 610

Query: 497 KSVFDKM 503
            SV ++M
Sbjct: 611 GSVRNRM 617


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 205/592 (34%), Positives = 334/592 (56%), Gaps = 10/592 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG-FA 97
           + S++T+Y +N    +AL++Y  M    + V      T+L ACA +     GK IH   +
Sbjct: 92  WGSMLTAYAQNGHYRAALDLYKRMDLQPNPV---VYTTVLGACASIKALEEGKAIHSRIS 148

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
              GL  D  + N+L+ MY++CGSL  A+ LF+ M  R V SW+ MI  Y + G  EEA+
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAI 208

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            +  +M   D+ PS     S++S  +++  +D G+ IHA +  + +  +L +++  AL+ 
Sbjct: 209 RLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALI--SSRGTELDLSLQNALLT 263

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY++C  L  A ++F RL +  VVSW+ MI+ +   +  +E +  +++M  E V P+  T
Sbjct: 264 MYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYT 323

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             S+++ C  VG L+ G+ +H  IL NG++ +L    ALVD+Y     +  AR+LFD ++
Sbjct: 324 FASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIE 383

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMK-VSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           ++D  +W  +I  Y++        EL+  MK  +KV   ++    ++S C   GA    +
Sbjct: 384 NRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADAR 443

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
             H+ IE  G+  D +L T+LV+MY++ G++  A ++F +   RD   W  ++AGY  HG
Sbjct: 444 QAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHG 503

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
               AL  + +ME  G +P+ +TF+ +L ACSHAGL  +GK +F  +     + P I HY
Sbjct: 504 EHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHY 563

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            C++DLL RAG L +A E+I +MP+ PN + W +LL AS++HK+      AA QI +++P
Sbjct: 564 SCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDP 623

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            +    VL+SN++AV      +A VR  M    VKK  G S +EV   +H+F
Sbjct: 624 VDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEF 675



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 139/469 (29%), Positives = 244/469 (52%), Gaps = 11/469 (2%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           ++IH   I      + ++ N +++ Y +CGS+ SAR  FD +  ++  SW +M+  Y + 
Sbjct: 44  RQIHD-RISGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQN 102

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           G    AL++ +    MD++P+ V   +++   A +  ++ GKAIH+  +   K  KL V 
Sbjct: 103 GHYRAALDLYKR---MDLQPNPVVYTTVLGACASIKALEEGKAIHS-RISGTKGLKLDVI 158

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           +  +L+ MY+KCG+L  AK+LF R++  SV SW  MI+ Y +     E +RL+ +M   +
Sbjct: 159 LENSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---D 215

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           V PS  T  S++  C  +G L  G+ +HA I   G E  L++ NAL+ MY +C+ +  A 
Sbjct: 216 VEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAA 275

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +F  +  +DV+ W+A+I+A+A+    D+A E +  M++  VRPN  T   +L  C   G
Sbjct: 276 KIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVG 335

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
            L  G+ +H  I   G ++ ++  TALVD+Y   G ++ A  LF +   RD  +W  ++ 
Sbjct: 336 DLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIG 395

Query: 451 GYGMHGCGEEALIFFVDMERSGVKP-NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           GY   G     L  + +M+ +   P   I +  +++AC+  G   + +      +   G+
Sbjct: 396 GYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSD-IEADGM 454

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +        +V++  R G L+ A ++   M  R + + W  L+A    H
Sbjct: 455 ISDFVLATSLVNMYSRWGNLESARQVFDKMSSR-DTLAWTTLIAGYAKH 502


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 210/651 (32%), Positives = 341/651 (52%), Gaps = 76/651 (11%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           I   +T YN+ +  + +     +A+ +    +K  SE++  T  ++L+ CA       GK
Sbjct: 62  IDRQVTDYNAKILHFCQLGNLENAMELVCMCQK--SELETKTYSSVLQLCAGSKSLTDGK 119

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLV---------------------------- 123
           ++H     N +  D  +   L+ +Y+ CG L                             
Sbjct: 120 KVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIG 179

Query: 124 -----------------------SARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
                                  SA  LFD++ +RDV+SW++MI GY   GL E  LE+ 
Sbjct: 180 DFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIY 239

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
           ++M ++ I      +IS++   A+   + LGKA+H+  +++  + ++    +  L+DMYS
Sbjct: 240 KQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRIN--FSNTLLDMYS 297

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           KCG+L  A ++F ++ + +VVSWT MI+GY R    +  +RL  +M +E V    +   S
Sbjct: 298 KCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATTS 357

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           ++  C   G L  GK +H YI  N  E +L + NAL+DMY KC  +  A ++F  M  KD
Sbjct: 358 ILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKD 417

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           ++ WN +I                      +++P+  TM  +L  C    ALE GK +H 
Sbjct: 418 IISWNTMIG---------------------ELKPDSRTMACILPACASLSALERGKEIHG 456

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
           YI + G   D  +  ALVD+Y KCG +  A  LF     +D+  W  M++GYGMHG G E
Sbjct: 457 YILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNE 516

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           A+  F +M  +G++P+ ++FI +L ACSH+GL+ +G   F  M +   + PK+EHY CMV
Sbjct: 517 AIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMV 576

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYG 580
           DLL R G L +A+E I+++P+ P+  +WGALL   +++ +  + E  A ++ E+EP+N G
Sbjct: 577 DLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTG 636

Query: 581 YNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           Y VL++NIYA A +W +V  +R  + +  ++K PG S +E+ G V+ F+ G
Sbjct: 637 YYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSG 687


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 198/544 (36%), Positives = 322/544 (59%), Gaps = 5/544 (0%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMY--SECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           K+ H   ++  L  +   S+ LI     S  G L  AR LF +M N D    +TMIRGY 
Sbjct: 28  KQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYA 87

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           R   P EA+ +   M    +         +++  A +  V LG+  H  V++N     L 
Sbjct: 88  RSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLF 147

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V    ALI  Y  CG+   A  +F+      VV+W +MI+ ++      +   L  EM +
Sbjct: 148 VI--NALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTK 205

Query: 269 -ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
            +N+ P E+T++SL+  C  +G L+ GK+LH+Y    G + +L + NA++DMY KC +I 
Sbjct: 206 LDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIE 265

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           SA+ +F+ ++ KDV+ W +++S  A++    +A  LF  M+++K+  +E+T+VG+LS C 
Sbjct: 266 SAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACA 325

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
           + GAL+ GK++H  I+K  +  D++L+TALVDMYAKCG ++ A ++F     R++  WNA
Sbjct: 326 QTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNA 385

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           ++ G  MHG GE+A+  F  ME   + P+ +TFI LL ACSHAGLV EG ++F  M +  
Sbjct: 386 LIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKF 445

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
            + P++EHYGC+VDLL RA  +D+A   I++MP++ N ++W  LL A +   +  + E  
Sbjct: 446 QIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGGHFDLAEKI 505

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHK 627
             +++E+EP + G  V++SN+YA  ++W+    +R+ MK   ++K PG S +E+NG++H+
Sbjct: 506 GRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQ 565

Query: 628 FIRG 631
           F+ G
Sbjct: 566 FVAG 569



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 149/454 (32%), Positives = 235/454 (51%), Gaps = 39/454 (8%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHFK----FS---------------------YTNIINPLT 37
           +K    ++ +T+Q HA +++TH      FS                     +T + NP  
Sbjct: 17  LKTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDP 76

Query: 38  RY-NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGF 96
              N+++  Y ++  P  A+++Y FM + G  VDN+T P +L ACA++    LG+  H  
Sbjct: 77  FICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCE 136

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
            +KNG   D +V NALIQ Y  CGS   A  +FDE   RDVV+W+ MI  +   GL E+A
Sbjct: 137 VLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKA 196

Query: 157 LEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            +++ EM  +D +RP EV M+S+V   A + +++ GK +H+       DE L V    A+
Sbjct: 197 FDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRV--NNAI 254

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY KC ++  A+++FNR+ +  V+SWT M+SG  +     E + LF +M    +   E
Sbjct: 255 LDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDE 314

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           IT++ ++  C   G L  GK++H  I +      L +  ALVDMY KC  I  A  +F  
Sbjct: 315 ITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRR 374

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M+ ++V  WNA+I   A     + A  LF  M+  K+ P++VT + LL  C+ AG ++ G
Sbjct: 375 MRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEG 434

Query: 396 K----------WLHTYIEKQGLEVDVILKTALVD 419
                       +   +E  G  VD++ +   VD
Sbjct: 435 LAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVD 468


>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Vitis vinifera]
          Length = 629

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 202/577 (35%), Positives = 324/577 (56%), Gaps = 19/577 (3%)

Query: 67  SEVDNFTIPTILKACAQVLMTHL-------GKEIHGFAIKNGLDGDAYVSNALIQMYSEC 119
           + + +F  P  L  C   L           GKEIH + + NG         +LI MYS+C
Sbjct: 26  TAIQSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKC 85

Query: 120 GSLVSARYLF-DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISM 178
             +  A  +F D     +V +++ +I G+   G PEE  E  ++MR   + P +      
Sbjct: 86  NQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCA 145

Query: 179 VSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
           +    DV ++   K IH  + +     +L V I +AL++ Y K G + +A+  F  L   
Sbjct: 146 IKACLDVLEI---KKIHGLLFK--FGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIR 200

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
            VV W  M++GY +  +    +  F  M +E+V PS  T+  ++     +G L  G+ +H
Sbjct: 201 DVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIH 260

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
            + ++ G++  +A++N+L+DMYGKC+ I  A  +F+ M+ KD+  WN+++S + Q    D
Sbjct: 261 GFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHD 320

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY-----IEKQGLEVD-VI 412
               L   M  + ++P+ VT+  +L  C+   AL  G+ +H Y     + K G ++D V+
Sbjct: 321 GTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVL 380

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           LK A++DMYAKCG +  A+ +F     +D+  WN M+ GYGMHG G EAL  F  M    
Sbjct: 381 LKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQ 440

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
           +KP+ +TF+G+L+ACSHAG V++G++   +M     + P IEHY C++D+LGRAG LDEA
Sbjct: 441 LKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEA 500

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVA 592
           +E+  +MP+  N +VW ALLAA +LHK+  + E+AA ++ E+EP++ G  VLMSN+Y   
Sbjct: 501 YELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAV 560

Query: 593 NRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            R+ +V  VR  M++  V+K PG S +E+   VH F+
Sbjct: 561 GRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFV 597



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 242/466 (51%), Gaps = 20/466 (4%)

Query: 5   NGFLN--LEQTRQCHAHIIKTHFKFSYTNIINP-----LTRYNSLVTSYIKNNKPSSALN 57
           NGFLN  L  T   + +       F+ +   +P     +  +N++++ +I N  P     
Sbjct: 66  NGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFE 125

Query: 58  IYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYS 117
            Y  MR  G   D FT P  +KAC  VL     K+IHG   K GL+ D ++ +AL+  Y 
Sbjct: 126 FYQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYL 182

Query: 118 ECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMIS 177
           + G +  A+  F+E+P RDVV W+ M+ GY + G  E  LE  R M    + PS   +  
Sbjct: 183 KFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTG 242

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
           ++S+FA + D++ G+ IH   ++   D   GVA++ +LIDMY KC  +  A ++F  + +
Sbjct: 243 VLSVFAVMGDLNNGRIIHGFAMKMGYDS--GVAVSNSLIDMYGKCKCIEDALEIFEMMRE 300

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
             + SW  ++S + +C + +  +RL   M+   + P  +T+ +++  C  +  L  G+ +
Sbjct: 301 KDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREI 360

Query: 298 HAYILRNGFEF------SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
           H Y++ +G          + + NA++DMY KC  +R A  +F+ M +KDV  WN +I  Y
Sbjct: 361 HGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGY 420

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-WLHTYIEKQGLEVD 410
                 ++A E+F  M   +++P+EVT VG+LS C+ AG +  G+ +L     K  +   
Sbjct: 421 GMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPT 480

Query: 411 VILKTALVDMYAKCGDVNGAYRL-FSEAIYRDICMWNAMMAGYGMH 455
           +   T ++DM  + G ++ AY L  +  I  +  +W A++A   +H
Sbjct: 481 IEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLH 526


>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 624

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 200/543 (36%), Positives = 316/543 (58%), Gaps = 7/543 (1%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQM-YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           +I   AI +G+  D  VS+ L+    S       +R LF ++   +V SW+ M R Y R 
Sbjct: 46  QILSHAIASGVFRDPVVSSKLLYYSLSHDHDFAFSRTLFFQIHKPNVFSWNFMFRAYSRS 105

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
             P E + +   M      P   +   ++   A ++ +  G+ IH+  ++      L V 
Sbjct: 106 SFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLK--LGVHLDVF 163

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQ--NSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           +  ALI  +S CG +  A+ +F+ L      VVSW  MISGY++ +     +++F E++ 
Sbjct: 164 VQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFWELLG 223

Query: 269 E-NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
           + ++ P E+T++S +  CG +G L LGK +H     +GF   + + ++L+DMY KC +I 
Sbjct: 224 DGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLIDMYSKCGQIE 283

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            AR +FD +  ++ + W ++I+ YAQ+    +A ELF  M++     +  T+  +LS C 
Sbjct: 284 DARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAATIACVLSACG 343

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
             GAL  G+W+H Y E+  +E+D+  + AL+ MY+KCGD+  A  +F      DI  W+A
Sbjct: 344 HWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSA 403

Query: 448 MMAGYGMHGCGEEALIFFVDMER-SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           +++G  M+G  ++AL  F  ME  S ++PN ITF+G+L AC+H G V +G   F+ M   
Sbjct: 404 VISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQI 463

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
             L P IEHYGCMVDLLGRA LL EA + I+++P++P++++W +LL A + H N  + E 
Sbjct: 464 YNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEF 523

Query: 567 AATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVH 626
           AA QI E+EP+  G  VL+SN+YA A+RW DV  VR+ M   R+KK+PG S VE++GLVH
Sbjct: 524 AAKQIEELEPRRCGARVLLSNVYASASRWGDVKRVRKDMATQRIKKQPGCSFVEIDGLVH 583

Query: 627 KFI 629
           +  
Sbjct: 584 ELF 586



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 156/450 (34%), Positives = 242/450 (53%), Gaps = 28/450 (6%)

Query: 25  FKFSYT---NIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA 80
           F FS T    I  P +  +N +  +Y +++ P+  + +Y  M +NG+  DN++ P +LKA
Sbjct: 77  FAFSRTLFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKA 136

Query: 81  CAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN--RDVV 138
           CA++ + H G+EIH   +K G+  D +V NALI  +S CG++ +AR +FD +P   RDVV
Sbjct: 137 CARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVV 196

Query: 139 SWSTMIRGYHRGGLPEEALEVMREMRF-MDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
           SW++MI GY +    E AL+V  E+     + P EV ++S +S+   +  +DLGK IH  
Sbjct: 197 SWNSMISGYLQSHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGL 256

Query: 198 VVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN 257
              +     L V + ++LIDMYSKCG +  A+++F+R+   + V WT MI+GY + +   
Sbjct: 257 FTGS--GFVLDVFVGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFK 314

Query: 258 EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALV 317
           E + LF EM          TI  ++  CG  G L  G+W+H Y  RN  E  L   NAL+
Sbjct: 315 EAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALI 374

Query: 318 DMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK-VSKVRPNE 376
            MY KC +I+ A  +F G+   D+  W+AVIS  A     DKA  LF  M+ +S +RPNE
Sbjct: 375 GMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNE 434

Query: 377 VTMVGLLSLCTEAGALEMGKW----------LHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           +T +G+L  C   G ++ G +          L   IE  G  VD++ +  L+        
Sbjct: 435 ITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLL-------- 486

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
           V     + +  I  D+ +W +++     HG
Sbjct: 487 VEAEKFIRTLPIQPDVVIWRSLLFACRNHG 516


>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
          Length = 773

 Score =  377 bits (967), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 210/591 (35%), Positives = 341/591 (57%), Gaps = 13/591 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRK---NGSEVDNF-TIPTILKACAQVLMTHLGKEIH 94
           + ++++  ++N +    L     M +   +GS   N  T+ + L+AC  +   + G+ +H
Sbjct: 184 WTAVISGCVRNGESGEGLRYLVEMVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLH 243

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           G+ +K G+     V +AL  MYS+C S   A  LF E+P +DVVSW+++I  Y R GL  
Sbjct: 244 GYVVKVGIGDSPMVISALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLIT 303

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV-RNCKDEKLGVAIAT 213
           EA+E+ ++M    ++P E+ +  ++S   +  +V  GK  HA +  RN  D    V I  
Sbjct: 304 EAMELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDS---VLIGN 360

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALI MY K   +  A ++F  L+Q    SW +M+ GY +     + + L+ EM   + + 
Sbjct: 361 ALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREMQLRDKYE 420

Query: 274 ---SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
                 +++S I  C  +  L+LG+  H Y +++  +   ++AN L+ MYG+C +   A 
Sbjct: 421 FWCVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHAC 480

Query: 331 TLFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
            +F   K K DV+ WN +IS+YA     + A  L+  M +  + PN  T++ ++S C   
Sbjct: 481 KIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANL 540

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            ALE G+ +H+Y+++ G + DV + TAL+DMYAKCG +  A R+F   +  D+  WN M+
Sbjct: 541 VALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMI 600

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           +GYGMHG  ++AL  F  ME   +KPNG+TF+ +L+A  H+GL+ EG+ VF +M     L
Sbjct: 601 SGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKVFTRMGK-YSL 659

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            P ++HY CMVDLLG++G L EA +M+ +MP+ P+  +WG LL+A KLH N  MG   A 
Sbjct: 660 EPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTLLSACKLHDNFEMGLRIAK 719

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
           +    +P+N GY +L+SN Y  A +W+++  +R  MK + V+K  G+S+V+
Sbjct: 720 KAFASDPENEGYYILISNSYGGAKKWDEIEKLRETMKNLGVQKGVGWSAVD 770



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 160/552 (28%), Positives = 276/552 (50%), Gaps = 31/552 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL+ ++   +   +AL+ +  M  +G+    FT P    A A++    +G  +H + +
Sbjct: 79  WNSLIRTHHCASDFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCV 138

Query: 99  KNGL---DGDAY-VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           + GL   DGD+  V+++L+ MY+ CG++  A  +F+EMP RDVV+W+ +I G  R G   
Sbjct: 139 RYGLLVGDGDSVAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESG 198

Query: 155 EALEVMREMRFM----DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           E L  + EM  +     +RP+   M S +     + +++ G+ +H  VV      K+G+ 
Sbjct: 199 EGLRYLVEMVRLAGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVV------KVGIG 252

Query: 211 ----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
               + +AL  MYSKC +   A  LF  L +  VVSWT +I  Y R   I E + LF +M
Sbjct: 253 DSPMVISALFSMYSKCYSTEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQM 312

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
           +E  + P EI +  ++   G  G +  GK  HA I +  F  S+ + NAL+ MYGK   +
Sbjct: 313 MESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMV 372

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS---KVRPNEVTMVGLL 383
            SA  +F  +  +D   WN ++  Y +A C  K  EL+  M++    +      ++V  +
Sbjct: 373 DSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVADSLVSAI 432

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DI 442
           S C+    L +G+  H Y  K  L+ D  +   L+ MY +CG  + A ++F  A  + D+
Sbjct: 433 SSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDV 492

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             WN +++ Y   G    A+  +  M   G+ PN  T I +++AC++   +  G+ +   
Sbjct: 493 VTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIH-S 551

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
            V  +G    +     ++D+  + G L  A  +  SM L+ +++ W  +++   +H    
Sbjct: 552 YVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSM-LQHDVVAWNVMISGYGMH---- 606

Query: 563 MGEIAATQILEI 574
            GE  A Q LE+
Sbjct: 607 -GE--AKQALEL 615



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 147/513 (28%), Positives = 240/513 (46%), Gaps = 15/513 (2%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            +H  A+ +GL     ++  L+  YS  G    A   F   P  D   W+++IR +H   
Sbjct: 31  RVHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCAS 90

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGV 209
               AL   R M     RPS        S  A++  + +G A+HA  VR      +   V
Sbjct: 91  DFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSV 150

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI-- 267
           A+A++L+ MY++CGN+  A ++F  + +  VV+WT +ISG +R  E  EG+R   EM+  
Sbjct: 151 AVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRL 210

Query: 268 --EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
             + +V P+  T+ S +  CG +  L  G+ LH Y+++ G   S  + +AL  MY KC  
Sbjct: 211 AGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYS 270

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
              A  LF  +  KDV+ W ++I  Y +   I +A ELF  M  S ++P+E+ +  +LS 
Sbjct: 271 TEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSG 330

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
               G +  GK  H  I K+     V++  AL+ MY K   V+ A R+F     RD   W
Sbjct: 331 LGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSW 390

Query: 446 NAMMAGYGMHGCGEEALIFFVDME---RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
           N M+ GY   GC  + L  + +M+   +        + +  +++CS    +  G+S    
Sbjct: 391 NLMVVGYCKAGCDVKCLELYREMQLRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCY 450

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA--ASKLHKN 560
            +  L L         ++ + GR G  D A ++     L+ +++ W  L++  A   H N
Sbjct: 451 SIKHL-LDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSN 509

Query: 561 PSMGEIAATQILEIEPQNYGYNVLMSNIYAVAN 593
            +M       I  + P +     L++ I A AN
Sbjct: 510 AAMSLYDQMLIEGLTPNS---TTLITVISACAN 539



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 109/205 (53%), Gaps = 2/205 (0%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           F    +   +  +N+L++SY      ++A+++Y  M   G   ++ T+ T++ ACA ++ 
Sbjct: 483 FGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVA 542

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
              G++IH +  + G D D  ++ ALI MY++CG L  AR +FD M   DVV+W+ MI G
Sbjct: 543 LERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISG 602

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           Y   G  ++ALE+  +M    I+P+ V  ++++S       ++ G+ +   + +   +  
Sbjct: 603 YGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSGLLEEGRKVFTRMGKYSLEPN 662

Query: 207 LGVAIATALIDMYSKCGNLAYAKQL 231
           L       ++D+  K G+L  A+ +
Sbjct: 663 L--KHYACMVDLLGKSGHLQEAEDM 685


>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 202/578 (34%), Positives = 324/578 (56%), Gaps = 19/578 (3%)

Query: 66  GSEVDNFTIPTILKACAQVLMTHL-------GKEIHGFAIKNGLDGDAYVSNALIQMYSE 118
            + + +F  P  L  C   L           GKEIH + + NG         +LI MYS+
Sbjct: 25  STAIQSFQQPYNLTTCIASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSK 84

Query: 119 CGSLVSARYLF-DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMIS 177
           C  +  A  +F D     +V +++ +I G+   G PEE  E  ++MR   + P +     
Sbjct: 85  CNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPC 144

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
            +    DV ++   K IH  + +     +L V I +AL++ Y K G + +A+  F  L  
Sbjct: 145 AIKACLDVLEI---KKIHGLLFK--FGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPI 199

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
             VV W  M++GY +  +    +  F  M +E+V PS  T+  ++     +G L  G+ +
Sbjct: 200 RDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRII 259

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           H + ++ G++  +A++N+L+DMYGKC+ I  A  +F+ M+ KD+  WN+++S + Q    
Sbjct: 260 HGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDH 319

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY-----IEKQGLEVD-V 411
           D    L   M  + ++P+ VT+  +L  C+   AL  G+ +H Y     + K G ++D V
Sbjct: 320 DGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDV 379

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
           +LK A++DMYAKCG +  A+ +F     +D+  WN M+ GYGMHG G EAL  F  M   
Sbjct: 380 LLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEV 439

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
            +KP+ +TF+G+L+ACSHAG V++G++   +M     + P IEHY C++D+LGRAG LDE
Sbjct: 440 QLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDE 499

Query: 532 AHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAV 591
           A+E+  +MP+  N +VW ALLAA +LHK+  + E+AA ++ E+EP++ G  VLMSN+Y  
Sbjct: 500 AYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGA 559

Query: 592 ANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
             R+ +V  VR  M++  V+K PG S +E+   VH F+
Sbjct: 560 VGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFV 597



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 242/466 (51%), Gaps = 20/466 (4%)

Query: 5   NGFLN--LEQTRQCHAHIIKTHFKFSYTNIINP-----LTRYNSLVTSYIKNNKPSSALN 57
           NGFLN  L  T   + +       F+ +   +P     +  +N++++ +I N  P     
Sbjct: 66  NGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFE 125

Query: 58  IYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYS 117
            Y  MR  G   D FT P  +KAC  VL     K+IHG   K GL+ D ++ +AL+  Y 
Sbjct: 126 FYQKMRNEGVIPDKFTFPCAIKACLDVLEI---KKIHGLLFKFGLELDVFIGSALVNCYL 182

Query: 118 ECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMIS 177
           + G +  A+  F+E+P RDVV W+ M+ GY + G  E  LE  R M    + PS   +  
Sbjct: 183 KFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTG 242

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
           ++S+FA + D++ G+ IH   ++   D   GVA++ +LIDMY KC  +  A ++F  + +
Sbjct: 243 VLSVFAVMGDLNNGRIIHGFAMKMGYDS--GVAVSNSLIDMYGKCKCIEDALEIFEMMRE 300

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
             + SW  ++S + +C + +  +RL   M+   + P  +T+ +++  C  +  L  G+ +
Sbjct: 301 KDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREI 360

Query: 298 HAYILRNGFEF------SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
           H Y++ +G          + + NA++DMY KC  +R A  +F+ M +KDV  WN +I  Y
Sbjct: 361 HGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGY 420

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-WLHTYIEKQGLEVD 410
                 ++A E+F  M   +++P+EVT VG+LS C+ AG +  G+ +L     K  +   
Sbjct: 421 GMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPT 480

Query: 411 VILKTALVDMYAKCGDVNGAYRL-FSEAIYRDICMWNAMMAGYGMH 455
           +   T ++DM  + G ++ AY L  +  I  +  +W A++A   +H
Sbjct: 481 IEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLH 526


>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
 gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
          Length = 772

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 209/594 (35%), Positives = 341/594 (57%), Gaps = 13/594 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRK----NGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           + ++V+  ++N +    L     M +      +  ++ T+ + L+AC  +   + G+ +H
Sbjct: 183 WTAVVSGCVRNGECGDGLRYLVEMVRLAGDGKARPNSRTMESGLEACGVLDELNSGRCLH 242

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           G+A+K G+     V +AL  MYS+C S   A  LF E+P +DVVSW+++I  Y   GL  
Sbjct: 243 GYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLFPELPEKDVVSWTSLIGIYCWRGLIR 302

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV-RNCKDEKLGVAIAT 213
           EA+E+ +EM    ++P +V +  ++S   +  +V  GKA HA ++ RN  D    V +  
Sbjct: 303 EAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKRNFGDN---VLVGN 359

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALI MY K   +  A ++F  L+Q    SW +MI GY +     + + L+ EM   + + 
Sbjct: 360 ALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVGYCKAGCDVKCLELYREMQFRDTYE 419

Query: 274 ---SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
                 +++S I  C  +  L+LG+  H Y +++  +   ++AN L+ MYG+C +   A 
Sbjct: 420 FLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHAC 479

Query: 331 TLFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
            +F   K K DV+ WN +IS+YA     + A  L+  M    + PN  T++ ++S C   
Sbjct: 480 KIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACANL 539

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            ALE G+ +H+Y+++ G + DV + TAL+DMYAKCG +  A R+F   +  D+  WN M+
Sbjct: 540 VALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMI 599

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           +GYGMHG  ++AL  F  ME   +KPNG+TF+ +L+AC H+GL+ EG+ +F +M     L
Sbjct: 600 SGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQLFTRMGK-YSL 658

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            P ++HY CMVDLLG++G L EA +M+ +MP+ P+  +WG LL+A KLH +  MG   A 
Sbjct: 659 EPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPDGGIWGTLLSACKLHDDFEMGLRIAK 718

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
           +    + +N GY +L+SN Y  A +W+++  +R  MK   V+K  G+S+V+  G
Sbjct: 719 KAFASDAENEGYYILISNSYGSAKKWDEIEKLREAMKNHGVQKGAGWSAVDYCG 772



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 154/552 (27%), Positives = 267/552 (48%), Gaps = 31/552 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL+ ++   +   +ALN +  M  + +    FT+P    A A++    +G  +H + +
Sbjct: 78  WNSLIRTHHCASDFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCV 137

Query: 99  KNGL----DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           + GL     G   V ++L+ MY+ CG +  A  LF+EM  RDVV+W+ ++ G  R G   
Sbjct: 138 RYGLLAVDGGSVAVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECG 197

Query: 155 EALEVMREMRFM----DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           + L  + EM  +      RP+   M S +     + +++ G+ +H   V      K+GV 
Sbjct: 198 DGLRYLVEMVRLAGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAV------KVGVG 251

Query: 211 ----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
               + +AL  MYSKC +   A  LF  L +  VVSWT +I  Y     I E + LF EM
Sbjct: 252 DSPMVISALFSMYSKCHSTEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEM 311

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
           +E  + P ++ +  L+   G  G +  GK  HA I++  F  ++ + NAL+ MYGK   +
Sbjct: 312 MESGLQPDDVLVSCLLSGLGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELV 371

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP---NEVTMVGLL 383
            +A  +F  +  +D   WN +I  Y +A C  K  EL+  M+         +  ++V  +
Sbjct: 372 DNAGRVFRLLHQRDADSWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAI 431

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DI 442
           S C+    L +G+  H Y  K  L+ D  +   L+ MY +CG  + A ++F  A  + D+
Sbjct: 432 SSCSRLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDV 491

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             WN +++ Y   G    A+  +  M   G+ PN  T I +++AC++   +  G+ +   
Sbjct: 492 VTWNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKIH-S 550

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
            V  +G    +     ++D+  + G L  A  +  SM L+ +++ W  +++   +H    
Sbjct: 551 YVKEMGWDYDVSINTALIDMYAKCGQLGTARRIFDSM-LQHDVVAWNVMISGYGMH---- 605

Query: 563 MGEIAATQILEI 574
            GE  A Q LE+
Sbjct: 606 -GE--AKQALEL 614



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 237/512 (46%), Gaps = 13/512 (2%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            +H  A+ +GL     +   L+  YS  G    A   F   P  D   W+++IR +H   
Sbjct: 30  RVHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCAS 89

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGV 209
               AL   R M     RPS   +    S  A++  + +G ++HA  VR      +   V
Sbjct: 90  DFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSV 149

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI-- 267
           A+ ++L+ MY++CG +  A +LF  + +  VV+WT ++SG +R  E  +G+R   EM+  
Sbjct: 150 AVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRL 209

Query: 268 --EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
             +    P+  T+ S +  CG +  L  G+ LH Y ++ G   S  + +AL  MY KC  
Sbjct: 210 AGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHS 269

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
              A +LF  +  KDV+ W ++I  Y     I +A ELF  M  S ++P++V +  LLS 
Sbjct: 270 TEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSG 329

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
              +G +  GK  H  I K+    +V++  AL+ MY K   V+ A R+F     RD   W
Sbjct: 330 LGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSW 389

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKP---NGITFIGLLNACSHAGLVTEGKSVFDK 502
           N M+ GY   GC  + L  + +M+         +  + +  +++CS    +  G+S    
Sbjct: 390 NLMIVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCY 449

Query: 503 MV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
            + H L     + +   ++ + GR G  D A ++     L+ +++ W  L+ +S  H   
Sbjct: 450 SIKHWLDEDSSVANV--LIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLI-SSYAHLGH 506

Query: 562 SMGEIAATQILEIEPQNYGYNVLMSNIYAVAN 593
           S   ++    +  E        L++ I A AN
Sbjct: 507 SNTAVSLYDQMLTEGLTPNSTTLITVISACAN 538



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 110/205 (53%), Gaps = 2/205 (0%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           F    +   +  +N+L++SY      ++A+++Y  M   G   ++ T+ T++ ACA ++ 
Sbjct: 482 FGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVA 541

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
              G++IH +  + G D D  ++ ALI MY++CG L +AR +FD M   DVV+W+ MI G
Sbjct: 542 LERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISG 601

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           Y   G  ++ALE+  +M    I+P+ V  ++++S       ++ G+ +   + +   +  
Sbjct: 602 YGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSACCHSGLLEEGRQLFTRMGKYSLEPN 661

Query: 207 LGVAIATALIDMYSKCGNLAYAKQL 231
           L       ++D+  K G+L  A+ +
Sbjct: 662 L--KHYACMVDLLGKSGHLQEAEDM 684


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  376 bits (966), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 202/515 (39%), Positives = 308/515 (59%), Gaps = 13/515 (2%)

Query: 128 LFDEMPNR-DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
           LF++  +R DV SW+++I    RGG   E+L     MR +DI+P+       +   + + 
Sbjct: 37  LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
           D++ GK  H   +    +  L V+  +ALIDMYSKCG L+ A+ LF+ + + ++V+WT +
Sbjct: 97  DLNSGKQAHQQALVFGFESDLFVS--SALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSL 154

Query: 247 ISGYIRCNEINEGVRLFAEMI---------EENVFPSEITILSLIIECGFVGGLQLGKWL 297
           I+GY++ ++ +E + +F E +         E       + ++S++  C  V    + + +
Sbjct: 155 ITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGV 214

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           H   ++ G +  + + N L+D Y KC E+  +R +FD M  KDV+ WN++I+ YAQ    
Sbjct: 215 HGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLS 274

Query: 358 DKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
             AFE+F  M K    + NEVT+  LL  C   GAL +G  LH  + K G   +VI+ T+
Sbjct: 275 TDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATS 334

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           ++DMY KCG    A   F     +++  W AM+AGYGMHG   EAL  F  M  +GVKPN
Sbjct: 335 IIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPN 394

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
            ITFI +L ACSHAG + EG   F+ M H   + P +EHYGCMVDLLGRAG + EA+ +I
Sbjct: 395 YITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLI 454

Query: 537 KSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWN 596
           KSM +R + ++WG+LLAA ++HK+  + EI+A ++ +++P N GY VL++NIYA A RW 
Sbjct: 455 KSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWK 514

Query: 597 DVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           DV  +R ++K+  + K PG+S VE+ G VH F+ G
Sbjct: 515 DVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVG 549



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 133/429 (31%), Positives = 238/429 (55%), Gaps = 14/429 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL+    +      +L  +++MRK   + +  T P  +K+C+ +   + GK+ H  A+
Sbjct: 50  WNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQAL 109

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G + D +VS+ALI MYS+CG L +AR LFDE+P R++V+W+++I GY +     EAL 
Sbjct: 110 VFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALM 169

Query: 159 VMREMRF---------MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
           V +E  F         +      VAMIS++S  + V++  + + +H   ++   D+ +GV
Sbjct: 170 VFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGV 229

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
                L+D Y+KCG ++ ++++F+ + +  VVSW  MI+ Y +     +   +F  M++ 
Sbjct: 230 --ENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKA 287

Query: 270 NVFP-SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
                +E+T+ +L++ C   G L++G  LH  +++ G+  ++ MA +++DMY KC +   
Sbjct: 288 GGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEM 347

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           AR  FDGMK K+V  W A+I+ Y       +A ++F  M  + V+PN +T + +L+ C+ 
Sbjct: 348 ARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYITFISVLAACSH 407

Query: 389 AGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWN 446
           AG LE G +W +    +  +E  V     +VD+  + G +  AY L  S  + RD  +W 
Sbjct: 408 AGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWG 467

Query: 447 AMMAGYGMH 455
           +++A   +H
Sbjct: 468 SLLAACRIH 476



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 177/331 (53%), Gaps = 22/331 (6%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYA-FMRKN--------GSEVDNFTIPTILKACAQVLM 86
           +  + SL+T Y++N+    AL ++  F+ +         G+ VD+  + ++L AC++V  
Sbjct: 148 IVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSN 207

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
             + + +HG AIK GLD    V N L+  Y++CG +  +R +FD+M  +DVVSW++MI  
Sbjct: 208 KAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAV 267

Query: 147 YHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           Y + GL  +A EV   M +    + +EV + +++   A    + +G  +H  V+      
Sbjct: 268 YAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVI------ 321

Query: 206 KLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVR 261
           K+G    V +AT++IDMY KCG    A+  F+ + + +V SWT MI+GY       E + 
Sbjct: 322 KMGYVNNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALD 381

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMY 320
           +F +MI   V P+ IT +S++  C   G L+ G +W +A       E  +     +VD+ 
Sbjct: 382 VFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLL 441

Query: 321 GKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
           G+   I+ A  L   MK  +D ++W ++++A
Sbjct: 442 GRAGYIKEAYNLIKSMKVRRDFVLWGSLLAA 472


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 205/593 (34%), Positives = 345/593 (58%), Gaps = 8/593 (1%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           N  ++ Y+ + + S+ L  +A M ++  E D  T   +L    +V    LG+++H  A+K
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
            GLD    VSN+LI MY +      AR +FD M  RD++SW+++I G  + GL  EA+ +
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVAD-VDLGKAIH--ACVVRNCKDEKLGVAIATALI 216
             ++    ++P +  M S++   + + + + L K +H  A  + N  D      ++TALI
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS----FVSTALI 459

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           D YS+   +  A+ LF R N + +V+W  M++GY + ++ ++ ++LFA M ++     + 
Sbjct: 460 DAYSRNRCMKEAEILFERHNFD-LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDF 518

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T+ ++   CGF+  +  GK +HAY +++G++  L +++ ++DMY KC ++ +A+  FD +
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
              D + W  +IS   +    ++AF +F  M++  V P+E T+  L    +   ALE G+
Sbjct: 579 PVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR 638

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H    K     D  + T+LVDMYAKCG ++ AY LF      +I  WNAM+ G   HG
Sbjct: 639 QIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHG 698

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
            G+E L  F  M+  G+KP+ +TFIG+L+ACSH+GLV+E       M    G+ P+IEHY
Sbjct: 699 EGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHY 758

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            C+ D LGRAGL+ +A  +I+SM +  +  ++  LLAA ++  +   G+  AT++LE+EP
Sbjct: 759 SCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEP 818

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            +    VL+SN+YA A++W+++   R +MK  +VKK+PGFS +EV   +H F+
Sbjct: 819 LDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFV 871



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/528 (25%), Positives = 243/528 (46%), Gaps = 51/528 (9%)

Query: 36  LTRYNSLVTSYIKNNKP-----SSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           L  +NS++ +Y ++++        A  ++  +R++       T+  +LK C         
Sbjct: 105 LVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWAS 164

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           +  HG+A K GLDGD +V+ AL+ +Y + G +   + LF+EMP RDVV W+ M++ Y   
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM 224

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           G  EEA+++        + P+E+ +  +  +  D  D D G+                  
Sbjct: 225 GFKEEAIDLSSAFHSSGLNPNEITLRLLARISGD--DSDAGQV----------------- 265

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM----ISGYIRCNEINEGVRLFAEM 266
                              + F   N  S VS  +     +S Y+   + +  ++ FA+M
Sbjct: 266 -------------------KSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADM 306

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
           +E +V   ++T + ++     V  L LG+ +H   L+ G +  L ++N+L++MY K R+ 
Sbjct: 307 VESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKF 366

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             ART+FD M  +D++ WN+VI+  AQ     +A  LF+ +    ++P++ TM  +L   
Sbjct: 367 GFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAA 426

Query: 387 TE-AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
           +     L + K +H +  K     D  + TAL+D Y++   +  A  LF    + D+  W
Sbjct: 427 SSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAW 485

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           NAMMAGY     G + L  F  M + G + +  T   +   C     + +GK V    + 
Sbjct: 486 NAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIK 545

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
             G    +     ++D+  + G +  A     S+P+ P+ + W  +++
Sbjct: 546 S-GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMIS 591



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 177/353 (50%), Gaps = 30/353 (8%)

Query: 10  LEQTRQCHAHIIKTH---FKFSYTNIINPLTR--------------------YNSLVTSY 46
           L  ++Q H H IK +     F  T +I+  +R                    +N+++  Y
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGY 492

Query: 47  IKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDA 106
            +++     L ++A M K G   D+FT+ T+ K C  +   + GK++H +AIK+G D D 
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 552

Query: 107 YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM 166
           +VS+ ++ MY +CG + +A++ FD +P  D V+W+TMI G    G  E A  V  +MR M
Sbjct: 553 WVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLM 612

Query: 167 DIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALIDMYSKCGNL 225
            + P E  + ++    + +  ++ G+ IHA  ++ NC ++     + T+L+DMY+KCG++
Sbjct: 613 GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPF---VGTSLVDMYAKCGSI 669

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
             A  LF R+   ++ +W  M+ G  +  E  E ++LF +M    + P ++T + ++  C
Sbjct: 670 DDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSAC 729

Query: 286 GFVGGLQLGKWLHAYILRN--GFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
               GL    + H   +    G +  +   + L D  G+   ++ A  L + M
Sbjct: 730 SH-SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESM 781



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 217/442 (49%), Gaps = 10/442 (2%)

Query: 25  FKFSYTNIIN----PLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA 80
           F F+ T   N     L  +NS++    +N     A+ ++  + + G + D +T+ ++LKA
Sbjct: 366 FGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425

Query: 81  CAQVLM-THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVS 139
            + +     L K++H  AIK     D++VS ALI  YS    +  A  LF E  N D+V+
Sbjct: 426 ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVA 484

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           W+ M+ GY +     + L++   M     R  +  + ++      +  ++ GK +HA  +
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544

Query: 200 RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
           ++  D  L + +++ ++DMY KCG+++ A+  F+ +     V+WT MISG I   E    
Sbjct: 545 KSGYD--LDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERA 602

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
             +F++M    V P E TI +L      +  L+ G+ +HA  L+        +  +LVDM
Sbjct: 603 FHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDM 662

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
           Y KC  I  A  LF  ++  ++  WNA++   AQ     +  +LF  MK   ++P++VT 
Sbjct: 663 YAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTF 722

Query: 380 VGLLSLCTEAGAL-EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEA 437
           +G+LS C+ +G + E  K + +     G++ ++   + L D   + G V  A  L  S +
Sbjct: 723 IGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMS 782

Query: 438 IYRDICMWNAMMAGYGMHGCGE 459
           +     M+  ++A   + G  E
Sbjct: 783 MEASASMYRTLLAACRVQGDTE 804



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 117/475 (24%), Positives = 211/475 (44%), Gaps = 51/475 (10%)

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           LGK  H   +    + + ++ N LI MYS+CGSL  AR +FD+MP+RD+VSW++++  Y 
Sbjct: 57  LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116

Query: 149 RGGLP-----EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH--ACVVRN 201
           +         ++A  + R +R   +  S + +  M+ L      V   ++ H  AC +  
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL 176

Query: 202 CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVR 261
             DE     +A AL+++Y K G +   K LF  +    VV W +M+  Y+      E + 
Sbjct: 177 DGDE----FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           L +      + P+EIT             L+L   +       G   S A  N       
Sbjct: 233 LSSAFHSSGLNPNEIT-------------LRLLARISGDDSDAGQVKSFANGN------- 272

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
                       D     +++  N  +S Y  +       + F  M  S V  ++VT + 
Sbjct: 273 ------------DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFIL 320

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           +L+   +  +L +G+ +H    K GL++ + +  +L++MY K      A  +F     RD
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERD 380

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           +  WN+++AG   +G   EA+  F+ + R G+KP+  T   +L A S    + EG S+  
Sbjct: 381 LISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSK 437

Query: 502 KM-VHGLGLVPKIEHY--GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           ++ VH + +    + +    ++D   R   + EA  + +      +++ W A++A
Sbjct: 438 QVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF--DLVAWNAMMA 490


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/600 (34%), Positives = 349/600 (58%), Gaps = 6/600 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLGKEI 93
           L  +NSL+  + +N     A   +  + ++G  +  D  T+ T+L  C+      +G  I
Sbjct: 276 LISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVI 335

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG A+K GL  +  V NALI MYS+CG L  A  LF ++ N+ VVSW++MI  Y R G  
Sbjct: 336 HGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFV 395

Query: 154 EEALEVMREMRFMD--IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
            E  +++R+M   +  +  +EV +++++    + +++   +A+H   +R+    K    I
Sbjct: 396 FETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYK--ELI 453

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
             A I  Y+KCG+L +A+ +F  +N  SV SW  +I G+ +  +  + +  + EM    +
Sbjct: 454 NNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGI 513

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P + +I+SL++ CG +G LQ GK +H ++LRNG E +  +A +L+ +Y  C +    RT
Sbjct: 514 LPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRT 573

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
            F+ M  K+ + WNA++S Y+Q    ++A  LF  M    + P+E+ +  +L  C++  A
Sbjct: 574 YFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSA 633

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L +GK +H +  K  L  D  +  +L+DMYAK G +  + R+F+    +++  WN M+ G
Sbjct: 634 LGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITG 693

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           +G+HG G +A+  F DM+RS  +P+  TF+G+L AC HAGLV+EG +   +M     L P
Sbjct: 694 FGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEP 753

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
           ++EHY C++D+LGRAG L+EA   I  MP  P+  +W +LL++S  + +  MGE  A ++
Sbjct: 754 ELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKL 813

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           L +E       +L+SN+YA A +W+ V  VR+ MK++ ++K+ G S +E+ G V+ FI G
Sbjct: 814 LALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAG 873



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 160/473 (33%), Positives = 249/473 (52%), Gaps = 15/473 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIY-AFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           L ++N+LV+ Y++N     A++ +   +     + DNFT P ++KAC      HLGK +H
Sbjct: 174 LFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVH 233

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           G A+K GL  D +V NA+I +Y +CG L  A  LFD+MP ++++SW+++IRG+   G   
Sbjct: 234 GMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWL 293

Query: 155 EALEVMREM--RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA-- 210
           EA    R +      + P    M++++ + +   +VD+G  IH   V      KLG+   
Sbjct: 294 EAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAV------KLGLVHE 347

Query: 211 --IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM-I 267
             +  ALIDMYSKCG L+ A  LF ++   SVVSW  MI  Y R   + E   L  +M +
Sbjct: 348 LMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWM 407

Query: 268 EENVFP-SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
           EE +   +E+TIL+L+  C     L   + LH Y LR+ F++   + NA +  Y KC  +
Sbjct: 408 EEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSL 467

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             A  +F GM +K V  WNAVI  +AQ     KA + +  M    + P++ ++V LL  C
Sbjct: 468 VFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLAC 527

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
              G L+ GK +H ++ + GLE++  +  +L+ +Y  C         F     ++   WN
Sbjct: 528 GRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWN 587

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           AM++GY  +    EAL  F  M   G++P+ I    +L ACS    +  GK V
Sbjct: 588 AMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEV 640



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 150/605 (24%), Positives = 283/605 (46%), Gaps = 51/605 (8%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSL--VTSYIKNNKPSSALNIYA 60
           +KN  L+    +  +   +    +   +  +NP+++ + L  ++   +    + AL+   
Sbjct: 34  LKNSLLSTSTPKSSY-FFVSARTQSHQSRSVNPVSQLSLLEEISKLCEAGDLNGALDFLQ 92

Query: 61  FMRKNGSEVD----NFTIPTILKACAQVLMTHLGKEIHG-FAIKNGLDGDAYVSNALIQM 115
              KN +  D       +  +L+ C Q     +G+++     + +   GD  ++  LI M
Sbjct: 93  RAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITM 152

Query: 116 YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVA 174
           YS CG  + +R +FD + N+++  W+ ++ GY R  L +EA+    E+    + +P    
Sbjct: 153 YSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFT 212

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQ 230
              ++       D+ LGK++H   V      K+G+     +  A+I +Y KCG L  A +
Sbjct: 213 FPCLIKACTGKCDIHLGKSVHGMAV------KMGLIMDLFVGNAMIALYGKCGFLDEAVE 266

Query: 231 LFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE--ENVFPSEITILSLIIECGFV 288
           LF+++ + +++SW  +I G+       E  R F  ++E  + + P   T+++L+  C   
Sbjct: 267 LFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGE 326

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
           G + +G  +H   ++ G    L + NAL+DMY KC  +  A  LF  +++K V+ WN++I
Sbjct: 327 GNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMI 386

Query: 349 SAYAQAHCIDKAFELFIHMKVSK--VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
            AY++   + + F+L   M + +  +  NEVT++ LL  C E   L   + LH Y  +  
Sbjct: 387 GAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHS 446

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
            +   ++  A +  YAKCG +  A  +F     + +  WNA++ G+  +G   +AL F+ 
Sbjct: 447 FQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYF 506

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE------------ 514
           +M R G+ P+  + + LL AC   GL+  GK      +HG  L   +E            
Sbjct: 507 EMTRLGILPDDFSIVSLLLACGRLGLLQYGKE-----IHGFVLRNGLEMNSFVAVSLLSL 561

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE- 573
           ++ C     GR           ++M  + N + W A+L+    ++ P+       Q+L  
Sbjct: 562 YFHCSKPFYGRT--------YFETMGDK-NSVCWNAMLSGYSQNELPNEALSLFRQMLSD 612

Query: 574 -IEPQ 577
            +EP 
Sbjct: 613 GLEPD 617


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/581 (35%), Positives = 327/581 (56%), Gaps = 43/581 (7%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGS---LVSARYLFDEMPNRDVVSWSTMIRG 146
           G +IH   I NGL    +  + LI  +S  GS   L  +R LF ++   ++  W+TMIRG
Sbjct: 25  GLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRG 84

Query: 147 YHRGGLPEEALEVMREMRFMDIRP-SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           Y R   P EA+ +   M    I P +      +++  A ++ ++ G  +H+ ++++  + 
Sbjct: 85  YSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFES 144

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
            L V    ALI +YS  GNL  A+ LF+      +VS+  MI GY   N+    + LF E
Sbjct: 145 DLFVR--NALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGE 202

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN--GFEFSLAMANALVDMYGKC 323
           M    + P E T ++L   C  +    +GK +HA + +N    + ++ + +A+VDMY KC
Sbjct: 203 MQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKC 262

Query: 324 R--------------------------------EIRSARTLFDGMKSKDVMIWNAVISAY 351
                                            EI  AR LF+ M  +DV+ W A+IS Y
Sbjct: 263 GLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGY 322

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL-HTYIEKQGLEVD 410
           +QA    +A ELF  M+   ++P+EVT+V +LS C   GA ++GK L H YIE      +
Sbjct: 323 SQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQN 382

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEA--IYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            IL  A++DMYAKCG ++ A  +F       +   ++N+M+AG   HG GE A+  F ++
Sbjct: 383 TILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFREL 442

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
             +G+KP+ +TF+G+L AC H+GL+ EGK +F+ M +  G+ P++EHYGCMVDLLGR G 
Sbjct: 443 ISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGC 502

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNI 588
           L+EA+++++ MP   N ++W ALL+A + H N  +GEIA  ++LE+E Q+    VL+SNI
Sbjct: 503 LEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNI 562

Query: 589 YAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            A AN+W +   VR+VM++  ++K PG+S +E+ G +H+F+
Sbjct: 563 LADANQWEEARQVRKVMEDHGIRKPPGWSYIELGGAIHRFV 603



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 163/531 (30%), Positives = 272/531 (51%), Gaps = 47/531 (8%)

Query: 24  HFKFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNG-SEVDNFTIPTILKAC 81
           H +  ++ I  P L  +N+++  Y +++ P  A+ +Y  M   G +  +NFT P +L +C
Sbjct: 62  HSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSC 121

Query: 82  AQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWS 141
           A++     G E+H   IK+G + D +V NALI +YS  G+L  AR LFDE   RD+VS++
Sbjct: 122 ARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYN 181

Query: 142 TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN 201
           TMI+GY     PE AL +  EM+   I P E   +++ S+ + + + ++GK IHA V +N
Sbjct: 182 TMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKN 241

Query: 202 CKDEKLGVAIATALIDMYSKCG--NLA------------------------------YAK 229
            +     + + +A++DMY+KCG  N+A                               A+
Sbjct: 242 LRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVAR 301

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           +LFN +++  V+SWT MISGY +  + +E + LF EM    + P E+T+++++  C  +G
Sbjct: 302 KLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLG 361

Query: 290 GLQLGKWL-HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD--GMKSKDVMIWNA 346
              LGK L H YI    F  +  +  A++DMY KC  I SA  +F   G   K   ++N+
Sbjct: 362 AFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNS 421

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL-HTYIEKQ 405
           +I+  AQ    + A  +F  +  + ++P+EVT VG+L  C  +G +E GK L  +     
Sbjct: 422 MIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAY 481

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHG---CGEEA 461
           G++  +     +VD+  + G +  AY L  +  +  +  +W A+++    HG    GE A
Sbjct: 482 GIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIA 541

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVP 511
               ++ME      +G  ++ L N  + A    E + V   M  HG+   P
Sbjct: 542 GQKLLEMEAQ----HGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPP 588



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 191/404 (47%), Gaps = 63/404 (15%)

Query: 9   NLEQTRQCHAHIIKTHFK---------------FSYTN---------IINPLTRYNSLVT 44
           +LE   + H+HIIK  F+               F   N         ++  L  YN+++ 
Sbjct: 126 SLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIK 185

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN--GL 102
            Y + N+P SAL ++  M+ +G   D FT   +   C+ +   ++GK+IH    KN   +
Sbjct: 186 GYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSI 245

Query: 103 DGDAYVSNALIQMYSECG----------------------SLVS----------ARYLFD 130
           D +  + +A++ MY++CG                      S+V           AR LF+
Sbjct: 246 DSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFN 305

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
            M  RDV+SW+ MI GY + G   EALE+ +EM  + I+P EV +++++S  A +   DL
Sbjct: 306 HMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDL 365

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV--MIS 248
           GK ++   + N    +    +  A++DMY+KCG++  A ++F R+ +N    +    MI+
Sbjct: 366 GKRLYHQYIENGVFNQ-NTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIA 424

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFE 307
           G  +       + +F E+I   + P E+T + ++  CG  G ++ GK L   +    G +
Sbjct: 425 GLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIK 484

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
             +     +VD+ G+   +  A  L   M    + +IW A++SA
Sbjct: 485 PQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSA 528


>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/614 (33%), Positives = 335/614 (54%), Gaps = 6/614 (0%)

Query: 17  HAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPT 76
           HA I      F    +    T + +++  Y K  +   +L ++  M++     D + + +
Sbjct: 189 HACIDDARLLFDGLQVKTSFT-WTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSS 247

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +L AC  +     GK+IH + +++G+  D  + N  I  Y +C  +   R LFD M +++
Sbjct: 248 VLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKN 307

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           VVSW+T+I G  +     +AL++  EM  M   P      S+++    +  ++ G+ +HA
Sbjct: 308 VVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHA 367

Query: 197 CVVR-NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
             ++ N  ++     +   LIDMY+KC +L  A+++FN +    +VS+  MI GY R ++
Sbjct: 368 YAIKVNIDNDDF---VKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDK 424

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
           + E + LF EM      P+ +  +SL+     +  L+L   +H  I++ G        +A
Sbjct: 425 LCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSA 484

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
           L+D+Y KC  +  AR +F+ ++ KD+++W A+ S Y Q    +++ +L+  +++S+++PN
Sbjct: 485 LIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPN 544

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
           E T   +++  +   +L  G+  H  + K G + D  +   LVDMYAK G +  A++ F 
Sbjct: 545 EFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFI 604

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
              ++D   WN+M+A Y  HG  E+AL  F DM   G+KPN +TF+G+L+ACSH GL+  
Sbjct: 605 STNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDL 664

Query: 496 GKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAAS 555
           G   FD M    G+ P IEHY CMV LLGRAG L EA E I+ MP++   +VW +LL+A 
Sbjct: 665 GFDHFDSMSQ-FGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSAC 723

Query: 556 KLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPG 615
           ++  N  +G  AA   +   P + G  VL+SNI+A    W +V  +R  M    V KEPG
Sbjct: 724 RVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPG 783

Query: 616 FSSVEVNGLVHKFI 629
            S +EVN  +HKFI
Sbjct: 784 CSWIEVNNEIHKFI 797



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 152/586 (25%), Positives = 269/586 (45%), Gaps = 46/586 (7%)

Query: 25  FKFSYTNIINPLT--RYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACA 82
           +K  + N IN +    +++L+  +++   P          RK G E+ N      +  C 
Sbjct: 4   YKLKFLNKINVIQTLHFSTLLHQFLEPRIPP-----IIEQRKIGRELANLLQSPHIPCC- 57

Query: 83  QVLMTHLGKEIHGFAIKNGLDG-DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWS 141
                   K+IH   +  G    D ++ N L+  YS+   +  A  LFD M ++++V+WS
Sbjct: 58  --------KKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWS 109

Query: 142 TMIRGY-HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR 200
           +M+  Y H     E  +  ++ MR  + +P+E  + S+V        ++    IH  VV+
Sbjct: 110 SMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVK 169

Query: 201 NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
               +   V + T+LID Y+K   +  A+ LF+ L   +  +WT +I+GY +       +
Sbjct: 170 GGYVQD--VYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSL 227

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
           +LF +M E +V P +  + S++  C  +  L+ GK +H Y+LR+G    ++M N  +D Y
Sbjct: 228 KLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFY 287

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
            KC +++  R LFD M  K+V+ W  VI+   Q      A +LF+ M      P+     
Sbjct: 288 FKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCT 347

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
            +L+ C    ALE G+ +H Y  K  ++ D  +K  L+DMYAKC  +  A ++F+     
Sbjct: 348 SVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAI 407

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS---HAGLVTEGK 497
           D+  +NAM+ GY       EAL  F +M  S   P  + F+ LL   +   H  L  +  
Sbjct: 408 DLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQ-- 465

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR--------PNMIVWG 549
                 +HGL     I  YG  +D    + L+D   +  +    R         +++VW 
Sbjct: 466 ------IHGL-----IIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWT 514

Query: 550 ALLA--ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVAN 593
           A+ +    +     S+      Q+  ++P  + +  +++    +A+
Sbjct: 515 AMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIAS 560


>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 201/563 (35%), Positives = 322/563 (57%), Gaps = 17/563 (3%)

Query: 81  CAQVLMTHLGKEIHG-FAIKNGLDGDAYVS--NALIQMYSECGSLVSARYLFDEMPNRDV 137
           CA V     GK +H  F I+N     +++S  N+L+ +Y +CG L  AR LFD MP R+V
Sbjct: 22  CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMPLRNV 81

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           VSW+ ++ GY  GG   E L + + M    +  P+E    + +S  +    V  G   H 
Sbjct: 82  VSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHG 141

Query: 197 CVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRL---NQNSVVSWTVMISG 249
            +       K G+     + +AL+ MYS+C ++  A Q+ + +   + N + S+  +++ 
Sbjct: 142 LLF------KFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNA 195

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
            +      E V +   M++E V    +T + ++  C  +  LQLG  +HA +LR G  F 
Sbjct: 196 LVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFD 255

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
             + + L+DMYGKC E+ +AR +FDG+++++V++W A+++AY Q    +++  LF  M  
Sbjct: 256 EFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDR 315

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
               PNE T   LL+ C    AL  G  LH  +EK G +  VI++ AL++MY+K G ++ 
Sbjct: 316 EGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDS 375

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           +Y +F++ IYRDI  WNAM+ GY  HG G++AL  F DM  +   PN +TFIG+L+A SH
Sbjct: 376 SYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSH 435

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
            GLV EG    + ++    + P +EHY CMV LL RAGLLDEA   +K+  ++ +++ W 
Sbjct: 436 LGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWR 495

Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR 609
            LL A  +H+N  +G   A  +L+++P + G   L+SN+YA A RW+ V  +R++M+E  
Sbjct: 496 TLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYTLLSNMYAKARRWDGVVTIRKLMRERN 555

Query: 610 VKKEPGFSSVEVNGLVHKFIRGG 632
           +KKEPG S +++   +H F+  G
Sbjct: 556 IKKEPGASWLDIRNDIHVFLSEG 578



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 198/394 (50%), Gaps = 7/394 (1%)

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIATALIDMYSKCGNLAYA 228
           PS   +  ++ L ADV  +  GKA+HA  ++RN       ++   +L+ +Y KCG L  A
Sbjct: 10  PSLEELGKLLKLCADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLA 69

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE-ENVFPSEITILSLIIECGF 287
           + LF+ +   +VVSW V+++GY+      E + LF  M+  +N  P+E    + +  C  
Sbjct: 70  RNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSH 129

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD---GMKSKDVMIW 344
            G ++ G   H  + + G      + +ALV MY +C  +  A  + D   G    D+  +
Sbjct: 130 GGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSY 189

Query: 345 NAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK 404
           N+V++A  ++   ++A E+   M    V  + VT VG++ LC +   L++G  +H  + +
Sbjct: 190 NSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLR 249

Query: 405 QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIF 464
            GL  D  + + L+DMY KCG+V  A  +F     R++ +W A+M  Y  +G  EE+L  
Sbjct: 250 GGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNL 309

Query: 465 FVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLG 524
           F  M+R G  PN  TF  LLNAC+    +  G  +    V  LG    +     ++++  
Sbjct: 310 FTCMDREGTLPNEYTFAVLLNACAGIAALRHG-DLLHARVEKLGFKNHVIVRNALINMYS 368

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           ++G +D ++ +   M  R ++I W A++     H
Sbjct: 369 KSGSIDSSYNVFTDMIYR-DIITWNAMICGYSHH 401



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 208/425 (48%), Gaps = 12/425 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN-FTIPTILKACAQVLMTHLGKEIHGFA 97
           +N L+  Y+        L ++  M    +   N +   T L AC+       G + HG  
Sbjct: 84  WNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCHGLL 143

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR---DVVSWSTMIRGYHRGGLPE 154
            K GL    YV +AL+ MYS C  +  A  + D +P     D+ S+++++      G  E
Sbjct: 144 FKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGE 203

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIA 212
           EA+EV+R M    +    V  + ++ L A + D+ LG  +HA ++R     DE +G    
Sbjct: 204 EAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVG---- 259

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           + LIDMY KCG +  A+ +F+ L   +VV WT +++ Y++     E + LF  M  E   
Sbjct: 260 SMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTL 319

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P+E T   L+  C  +  L+ G  LHA + + GF+  + + NAL++MY K   I S+  +
Sbjct: 320 PNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNV 379

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F  M  +D++ WNA+I  Y+      +A ++F  M  ++  PN VT +G+LS  +  G +
Sbjct: 380 FTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSHLGLV 439

Query: 393 EMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMA 450
           + G  +L+  +    +E  +   T +V + ++ G ++ A     +  +  D+  W  ++ 
Sbjct: 440 KEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLDEAENFMKTTQVKWDVVAWRTLLN 499

Query: 451 GYGMH 455
              +H
Sbjct: 500 ACHVH 504



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 177/360 (49%), Gaps = 18/360 (5%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +N +  YNS++ + +++ +   A+ +   M       D+ T   ++  CAQ+    LG  
Sbjct: 183 VNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLR 242

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H   ++ GL  D +V + LI MY +CG +++AR +FD + NR+VV W+ ++  Y + G 
Sbjct: 243 VHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAYLQNGY 302

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG---- 208
            EE+L +   M      P+E     +++  A +A +  G  +HA V      EKLG    
Sbjct: 303 FEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARV------EKLGFKNH 356

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V +  ALI+MYSK G++  +  +F  +    +++W  MI GY       + +++F +M+ 
Sbjct: 357 VIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVS 416

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIR 327
               P+ +T + ++     +G ++ G +   +++RN   E  L     +V +  +   + 
Sbjct: 417 AEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLLD 476

Query: 328 SARTLFDGMKSK-DVMIWNAVISAYAQAHCIDKAFEL--FIHMKVSKVRPNEVTMVGLLS 384
            A       + K DV+ W  +++A    H + + ++L   I   V ++ P++V    LLS
Sbjct: 477 EAENFMKTTQVKWDVVAWRTLLNA---CH-VHRNYDLGRRIAESVLQMDPHDVGTYTLLS 532



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 79/179 (44%), Gaps = 13/179 (7%)

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHT--YIEKQGLEVDVILK-TALVDMYAKCGD 426
           S+  P+   +  LL LC +   L  GK +H    I  Q      I    +LV +Y KCG 
Sbjct: 6   SRYLPSLEELGKLLKLCADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQ 65

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM-ERSGVKPNGITFIGLLN 485
           +  A  LF     R++  WN +MAGY   G   E L+ F +M       PN   F   L+
Sbjct: 66  LGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALS 125

Query: 486 ACSHAGLVTEGKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
           ACSH G V EG        HGL    GLV        +V +  R   ++ A +++ ++P
Sbjct: 126 ACSHGGRVKEGMQ-----CHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDTVP 179


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/600 (31%), Positives = 325/600 (54%), Gaps = 2/600 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +++++  Y++N++ +  L +Y  M   G  V   T  +  ++CA +    LG ++H +A+
Sbjct: 239 WSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYAL 298

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K     D  V  A + MY++C  +V AR +F+  PN    S + +I GY R     EALE
Sbjct: 299 KTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALE 358

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R ++   +   E+++   ++  + +     G  +H   V+   D    + +A  ++DM
Sbjct: 359 IFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLD--FNICVANTILDM 416

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG L  A  +F+ +     VSW  +I+ + +   + E + LF  M+   + P + T 
Sbjct: 417 YAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTF 476

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C     L  G  +H  ++++G      + +A++DMY KC  +  A  + + ++ 
Sbjct: 477 GSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEE 536

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +  + WN++IS ++     + A   F  M    V P+  T   +L +C     +E+GK +
Sbjct: 537 RTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQI 596

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I K  L  DV + + +VDMY+KCG++  +  +F +A  RD   W+AM+  Y  HG G
Sbjct: 597 HGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLG 656

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           E+A+  F +M+   VKPN   FI +L AC+H G V +G   F +M    GL P++EHY C
Sbjct: 657 EDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSC 716

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLLGR+G ++EA E+I+SMP   + ++W  LL   +L  N  + E AA  +L+++PQ+
Sbjct: 717 MVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQD 776

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
               VL+SN+YA+A  W +VA +R  MK  ++KKEPG S ++V   VH F+ G   + +S
Sbjct: 777 SSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRS 836



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 159/560 (28%), Positives = 283/560 (50%), Gaps = 9/560 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +NS+++ Y++N     ++ I+  MR    + D  T   +LKAC  +    LG ++H 
Sbjct: 135 VVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHC 194

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            AI+ G D D     AL+ MYS C  L  A  +F EMP R+ V WS +I GY R     E
Sbjct: 195 LAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTE 254

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            L++ + M    +  S+    S     A ++  +LG  +HA  ++   +      + TA 
Sbjct: 255 GLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKT--NFGYDNIVGTAT 312

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+KC  +  A+++FN     +  S   +I GY R +++ E + +F  + +  +   E
Sbjct: 313 LDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDE 372

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           I++   +  C  + G   G  LH   ++ G +F++ +AN ++DMY KC  +  A  +FD 
Sbjct: 373 ISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDD 432

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M+ KD + WNA+I+A+ Q   +++   LF+ M  S + P++ T   ++  C    AL  G
Sbjct: 433 MEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYG 492

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H  + K G+ +D  + +A++DMY KCG +  A ++      R    WN++++G+   
Sbjct: 493 MEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSE 552

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
             GE AL +F  M + GV P+  T+  +L+ C++   V  GK +  +++  L L   +  
Sbjct: 553 KQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILK-LQLHSDVYI 611

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
              +VD+  + G + ++  M +  P R + + W A++ A   H    +GE A     E++
Sbjct: 612 ASTIVDMYSKCGNMQDSRIMFEKAPKR-DYVTWSAMICAYAYH---GLGEDAIKLFEEMQ 667

Query: 576 PQNYGYN--VLMSNIYAVAN 593
            QN   N  + +S + A A+
Sbjct: 668 LQNVKPNHTIFISVLRACAH 687



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 149/574 (25%), Positives = 275/574 (47%), Gaps = 39/574 (6%)

Query: 47  IKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDA 106
           I N++ +    I++      +     T   I + C+ +   + GK+ H      G     
Sbjct: 14  ILNSQTTPPYAIHSISSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTV 73

Query: 107 YVSNALIQMYSEC-------------------------------GSLVSARYLFDEMPNR 135
           +VSN L+Q Y +C                               G++  A++LFD MP R
Sbjct: 74  FVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPER 133

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
           DVVSW++M+  Y + G   +++E+  +MR ++I+        ++     + D  LG  +H
Sbjct: 134 DVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVH 193

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
              ++   D    V   TAL+DMYS C  L +A  +F  + + + V W+ +I+GY+R + 
Sbjct: 194 CLAIQMGFDSD--VVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDR 251

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
             EG++L+  M++E +  S+ T  S    C  +   +LG  LHAY L+  F +   +  A
Sbjct: 252 FTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTA 311

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
            +DMY KC  +  AR +F+   +      NA+I  YA+   + +A E+F  ++ S +  +
Sbjct: 312 TLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFD 371

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
           E+++ G L+ C+       G  LH    K GL+ ++ +   ++DMYAKCG +  A  +F 
Sbjct: 372 EISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFD 431

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
           +   +D   WNA++A +  +   EE L  FV M RS ++P+  TF  ++ AC+    +  
Sbjct: 432 DMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNY 491

Query: 496 GKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           G  V  +++  G+GL   +     ++D+  + G+L EA ++ + +  R   + W ++++ 
Sbjct: 492 GMEVHGRVIKSGMGLDWFVG--SAIIDMYCKCGMLVEAEKIHERLEERTT-VSWNSIISG 548

Query: 555 SKLHKNPSMGEIAATQILEIE--PQNYGYNVLMS 586
               K         +++L++   P N+ Y  ++ 
Sbjct: 549 FSSEKQGENALSYFSRMLQVGVIPDNFTYATVLD 582



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 169/320 (52%), Gaps = 8/320 (2%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I     +N+++ ++ +N      L ++  M ++  E D++T  +++KACA     + G E
Sbjct: 435 IKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGME 494

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HG  IK+G+  D +V +A+I MY +CG LV A  + + +  R  VSW+++I G+     
Sbjct: 495 VHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQ 554

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            E AL     M  + + P      +++ + A++A V+LGK IH  +++        V IA
Sbjct: 555 GENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILK--LQLHSDVYIA 612

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           + ++DMYSKCGN+  ++ +F +  +   V+W+ MI  Y       + ++LF EM  +NV 
Sbjct: 613 STIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVK 672

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYI-LRN--GFEFSLAMANALVDMYGKCREIRSA 329
           P+    +S++  C  +G +  G  LH +  +R+  G +  +   + +VD+ G+  ++  A
Sbjct: 673 PNHTIFISVLRACAHMGFVDKG--LHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEA 730

Query: 330 RTLFDGMK-SKDVMIWNAVI 348
             L + M    D +IW  ++
Sbjct: 731 LELIESMPFEADDVIWRTLL 750


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/600 (34%), Positives = 349/600 (58%), Gaps = 6/600 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLGKEI 93
           L  +NSL+  + +N     A   +  + ++G  +  D  T+ T+L  C+      +G  I
Sbjct: 276 LISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVI 335

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG A+K GL  +  V NALI MYS+CG L  A  LF ++ N+ VVSW++MI  Y R G  
Sbjct: 336 HGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFV 395

Query: 154 EEALEVMREMRFMD--IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
            E  +++R+M   +  +  +EV +++++    + +++   +A+H   +R+    K    I
Sbjct: 396 FETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYK--ELI 453

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
             A I  Y+KCG+L +A+ +F  +N  SV SW  +I G+ +  +  + +  + EM    +
Sbjct: 454 NNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGI 513

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P + +I+SL++ CG +G LQ GK +H ++LRNG E +  +A +L+ +Y  C +    RT
Sbjct: 514 LPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRT 573

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
            F+ M  K+ + WNA++S Y+Q    ++A  LF  M    + P+E+ +  +L  C++  A
Sbjct: 574 YFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSA 633

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L +GK +H +  K  L  D  +  +L+DMYAK G +  + R+F+    +++  WN M+ G
Sbjct: 634 LGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITG 693

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           +G+HG G +A+  F DM+RS  +P+  TF+G+L AC HAGLV+EG +   +M     L P
Sbjct: 694 FGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEP 753

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
           ++EHY C++D+LGRAG L+EA   I  MP  P+  +W +LL++S  + +  MGE  A ++
Sbjct: 754 ELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKL 813

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           L +E       +L+SN+YA A +W+ V  VR+ MK++ ++K+ G S +E+ G V+ FI G
Sbjct: 814 LALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAG 873



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 160/473 (33%), Positives = 249/473 (52%), Gaps = 15/473 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIY-AFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           L ++N+LV+ Y++N     A++ +   +     + DNFT P ++KAC      HLGK +H
Sbjct: 174 LFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVH 233

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           G A+K GL  D +V NA+I +Y +CG L  A  LFD+MP ++++SW+++IRG+   G   
Sbjct: 234 GMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWL 293

Query: 155 EALEVMREM--RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA-- 210
           EA    R +      + P    M++++ + +   +VD+G  IH   V      KLG+   
Sbjct: 294 EAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAV------KLGLVHE 347

Query: 211 --IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM-I 267
             +  ALIDMYSKCG L+ A  LF ++   SVVSW  MI  Y R   + E   L  +M +
Sbjct: 348 LMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWM 407

Query: 268 EENVFP-SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
           EE +   +E+TIL+L+  C     L   + LH Y LR+ F++   + NA +  Y KC  +
Sbjct: 408 EEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSL 467

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             A  +F GM +K V  WNAVI  +AQ     KA + +  M    + P++ ++V LL  C
Sbjct: 468 VFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLAC 527

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
              G L+ GK +H ++ + GLE++  +  +L+ +Y  C         F     ++   WN
Sbjct: 528 GRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVCWN 587

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           AM++GY  +    EAL  F  M   G++P+ I    +L ACS    +  GK V
Sbjct: 588 AMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEV 640



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/528 (25%), Positives = 257/528 (48%), Gaps = 28/528 (5%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSL--VTSYIKNNKPSSALNIYA 60
           +KN  L+    +  +   +    +   +  +NP+++ + L  ++   +    + AL+   
Sbjct: 34  LKNSLLSTSTPKSSY-FFVSARTQSHQSRSVNPVSQLSLLEEISKLCEAGDLNGALDFLQ 92

Query: 61  FMRKNGSEVD----NFTIPTILKACAQVLMTHLGKEIHG-FAIKNGLDGDAYVSNALIQM 115
              KN +  D       +  +L+ C Q     +G+++     + +   GD  ++  LI M
Sbjct: 93  RAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITM 152

Query: 116 YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVA 174
           YS CG  + +R +FD + N+++  W+ ++ GY R  L +EA+    E+    + +P    
Sbjct: 153 YSICGYPLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFT 212

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQ 230
              ++       D+ LGK++H   V      K+G+     +  A+I +Y KCG L  A +
Sbjct: 213 FPCLIKACTGKCDIHLGKSVHGMAV------KMGLIMDLFVGNAMIALYGKCGFLDEAVE 266

Query: 231 LFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE--ENVFPSEITILSLIIECGFV 288
           LF+++ + +++SW  +I G+       E  R F  ++E  + + P   T+++L+  C   
Sbjct: 267 LFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGE 326

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
           G + +G  +H   ++ G    L + NAL+DMY KC  +  A  LF  +++K V+ WN++I
Sbjct: 327 GNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMI 386

Query: 349 SAYAQAHCIDKAFELFIHMKVSK--VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
            AY++   + + F+L   M + +  +  NEVT++ LL  C E   L   + LH Y  +  
Sbjct: 387 GAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHS 446

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
            +   ++  A +  YAKCG +  A  +F     + +  WNA++ G+  +G   +AL F+ 
Sbjct: 447 FQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYF 506

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           +M R G+ P+  + + LL AC   GL+  GK      +HG  L   +E
Sbjct: 507 EMTRLGILPDDFSIVSLLLACGRLGLLQYGKE-----IHGFVLRNGLE 549



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 4/173 (2%)

Query: 382 LLSLCTEAGALEMGKWLHTYI-EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
           LL  C +   +E+G+ L   +        D +L T L+ MY+ CG    +  +F   + +
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDM-ERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           ++  WNA+++GY  +   +EA+  F+++   +  +P+  TF  L+ AC+    +  GKSV
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSV 232

Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
               V  +GL+  +     M+ L G+ G LDEA E+   MP   N+I W +L+
Sbjct: 233 HGMAVK-MGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMP-EQNLISWNSLI 283


>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
          Length = 1111

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 201/553 (36%), Positives = 324/553 (58%), Gaps = 5/553 (0%)

Query: 68   EVDNF-TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSAR 126
            E  NF T+    +AC  +     G+ +HG  +K G+D    V ++L+ MYS+CG+   A 
Sbjct: 563  ERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAH 622

Query: 127  YLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
              F E+ N+D++SW++MI  Y R G   E +++  EM    I P  + +  M+S F++  
Sbjct: 623  RSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSM 682

Query: 187  DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
             V   KA H  ++R  +   L   +  AL+ MY K G L  A++ F R+N+ +  +W +M
Sbjct: 683  RVFEAKAFHGLIIR--RHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLM 740

Query: 247  ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
            +SGY +   I + + LF EM    +     +++S++  C  +G   L + +H Y+++N  
Sbjct: 741  VSGYGKIGLIMKCIGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLM 800

Query: 307  EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
            + ++++ N+L+DMYGK   +  AR +F  +  +D++ WN +IS+YA      +A  L+  
Sbjct: 801  DENVSVNNSLIDMYGKSGNLTIARRIFCRI-PRDIVTWNTLISSYAHCGHFAEALSLYDK 859

Query: 367  MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
            M +  ++PN  T+V +LS C+   +LE G+ +H YI     E ++ + TAL+DMYAKCG 
Sbjct: 860  MVLEDLKPNSATLVXVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQ 919

Query: 427  VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
            +  +  +F+    RD+  WN M++GYGMHG    A+  F  ME S  KPNG+TF+ +L+A
Sbjct: 920  LEKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEXFQQMEESSAKPNGLTFLAVLSA 979

Query: 487  CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
            C+HAGLV EGK +F KM     + P ++HY CMVDLLGR+G L EA  ++ SMP+ P+  
Sbjct: 980  CAHAGLVKEGKYLFGKM-QDYSVAPNLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGG 1038

Query: 547  VWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMK 606
            VWGALL++ K+H    MG   A   +  + +N GY V++SN+Y+   +W +    R +MK
Sbjct: 1039 VWGALLSSCKIHNEIEMGIRIAKHAIXSDVENDGYYVMISNMYSSIGKWEEAEKARGIMK 1098

Query: 607  EIRVKKEPGFSSV 619
            E  V+K+ G+S+V
Sbjct: 1099 ERGVRKKTGWSAV 1111



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/430 (28%), Positives = 231/430 (53%), Gaps = 5/430 (1%)

Query: 28   SYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
            S+  ++N  +  + S++++Y +    +  ++++  M  +G   D   I  +L + +  + 
Sbjct: 624  SFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMR 683

Query: 87   THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
                K  HG  I+     D  V NAL+ MY + G L  A   F  +  ++  +W+ M+ G
Sbjct: 684  VFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSG 743

Query: 147  YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
            Y + GL  + + + REM+ + I     +++S+VS  + +    L ++IH  +++N  DE 
Sbjct: 744  YGKIGLIMKCIGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDE- 802

Query: 207  LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
              V++  +LIDMY K GNL  A+++F R+ ++ +V+W  +IS Y  C    E + L+ +M
Sbjct: 803  -NVSVNNSLIDMYGKSGNLTIARRIFCRIPRD-IVTWNTLISSYAHCGHFAEALSLYDKM 860

Query: 267  IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
            + E++ P+  T++ ++  C  +  L+ G+ +H YI    FEF+L++A AL+DMY KC ++
Sbjct: 861  VLEDLKPNSATLVXVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQL 920

Query: 327  RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
              +R +F+ M  +DV+ WN +IS Y        A E F  M+ S  +PN +T + +LS C
Sbjct: 921  EKSREIFNSMHERDVITWNVMISGYGMHGDARSAIEXFQQMEESSAKPNGLTFLAVLSAC 980

Query: 387  TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL-FSEAIYRDICMW 445
              AG ++ GK+L   ++   +  ++     +VD+  + G++  A  L  S  I  D  +W
Sbjct: 981  AHAGLVKEGKYLFGKMQDYSVAPNLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGGVW 1040

Query: 446  NAMMAGYGMH 455
             A+++   +H
Sbjct: 1041 GALLSSCKIH 1050



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 118/246 (47%), Gaps = 7/246 (2%)

Query: 29   YTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH 88
            +  I   +  +N+L++SY      + AL++Y  M     + ++ T+  +L AC+ +    
Sbjct: 827  FCRIPRDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLE 886

Query: 89   LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
             G+++H +      + +  ++ ALI MY++CG L  +R +F+ M  RDV++W+ MI GY 
Sbjct: 887  EGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYG 946

Query: 149  RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
              G    A+E  ++M     +P+ +  ++++S  A    V  GK +        +D  + 
Sbjct: 947  MHGDARSAIEXFQQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFG----KMQDYSVA 1002

Query: 209  VAIA--TALIDMYSKCGNLAYAKQLFNRLNQNSVVS-WTVMISGYIRCNEINEGVRLFAE 265
              +     ++D+  + GNL  A+ L   +  +     W  ++S     NEI  G+R+   
Sbjct: 1003 PNLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKH 1062

Query: 266  MIEENV 271
             I  +V
Sbjct: 1063 AIXSDV 1068



 Score = 46.6 bits (109), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 10/148 (6%)

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
           D V++S++   Y + GL ++A   + EM     R   +A  S++SL  ++ D D    +H
Sbjct: 260 DWVTYSSLTNLYIKKGLLDKAATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKD---GVH 316

Query: 196 ACVVRNCKD--EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT----VMISG 249
             + +  K    K+  A  T +I    K G    A+ L++     S    +    ++++ 
Sbjct: 317 R-IWKKLKSIFHKMNDAEYTCMISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILLAA 375

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEIT 277
           YI  NE+    + + +M+E  + PS  T
Sbjct: 376 YINKNEMEMAEKFYNQMVERGITPSYTT 403


>gi|125542314|gb|EAY88453.1| hypothetical protein OsI_09918 [Oryza sativa Indica Group]
          Length = 781

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/601 (33%), Positives = 337/601 (56%), Gaps = 3/601 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  +     P+ AL  Y  M ++G+  D FT P ++K CA++     G+  HG  I
Sbjct: 75  HNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDEGRAAHGMVI 134

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+ D Y  N+L+  Y++ G +  A  +FD MP RD+V+W+ M+ GY   GL   AL 
Sbjct: 135 KLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVSNGLGSLALA 194

Query: 159 VMREMR-FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
             +EM   ++++   V +I+ ++          GK IH  V+R+  ++   + + T+L+D
Sbjct: 195 CFQEMHDALEVQHDSVGIIAALAACCLEFSSMQGKEIHGYVIRHGLEQD--IKVGTSLLD 252

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY KCG +AYA+ +F  +   +VV+W  MI GY      +E    F +M  E +    +T
Sbjct: 253 MYCKCGEVAYARSVFATMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVT 312

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
            ++L+  C        G+ +H Y++R  F   + +  AL++MYGK  ++ S+  +F  + 
Sbjct: 313 AINLLAACAQTESSLYGRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIA 372

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           +K ++ WN +I+AY       +A  LF+ +    + P+  TM  ++      G+L   + 
Sbjct: 373 NKTLVSWNNMIAAYMYKEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQ 432

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H+YI   G   + ++  A++ MYA+ GDV  +  +F + + +D+  WN M+ GY +HG 
Sbjct: 433 IHSYIIGLGYAENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQ 492

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G+ AL  F +M+ +G++PN  TF+ +L ACS +GLV EG   F+ M+   G++P+IEHYG
Sbjct: 493 GKTALEMFDEMKYNGLQPNESTFVSVLTACSVSGLVDEGWMHFNLMLQEYGMIPQIEHYG 552

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CM DLLGR G L E  + I+SMP+ P   VWG+LL AS+   +  + E AA +I ++E  
Sbjct: 553 CMTDLLGREGDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIAEYAAERIFQLEHD 612

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWK 637
           N G  +++S++YA A RW DV  VR +MKE  +++    S VE++     F  G M + +
Sbjct: 613 NTGCYIVLSSMYADAGRWEDVERVRLLMKEKGLRRTEPISLVELHSTACSFANGDMSHSQ 672

Query: 638 S 638
           S
Sbjct: 673 S 673



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 161/338 (47%), Gaps = 14/338 (4%)

Query: 30  TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL 89
           T  +  +  +N ++  Y  N +P  A + +  MR  G +V+  T   +L ACAQ   +  
Sbjct: 269 TMPLRTVVTWNCMIGGYALNERPDEAFDCFMQMRAEGLQVEVVTAINLLAACAQTESSLY 328

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G+ +HG+ ++        +  AL++MY + G + S+  +F ++ N+ +VSW+ MI  Y  
Sbjct: 329 GRSVHGYVVRRQFLPHVVLETALLEMYGKVGKVESSEKIFGKIANKTLVSWNNMIAAYMY 388

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
             +  EA+ +  E+    + P    M ++V  F  +  +   + IH+ ++       LG 
Sbjct: 389 KEMYTEAITLFLELLNQPLYPDYFTMSTVVPAFVLLGSLRHCRQIHSYII------GLGY 442

Query: 210 A----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           A    I  A++ MY++ G++  ++++F+++    V+SW  MI GY    +    + +F E
Sbjct: 443 AENTLIMNAVLHMYARSGDVVASREIFDKMVSKDVISWNTMIMGYAIHGQGKTALEMFDE 502

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN--GFEFSLAMANALVDMYGKC 323
           M    + P+E T +S++  C  V GL    W+H  ++    G    +     + D+ G+ 
Sbjct: 503 MKYNGLQPNESTFVSVLTACS-VSGLVDEGWMHFNLMLQEYGMIPQIEHYGCMTDLLGRE 561

Query: 324 REIRSARTLFDGMK-SKDVMIWNAVISAYAQAHCIDKA 360
            ++R      + M       +W ++++A    + ID A
Sbjct: 562 GDLREVLQFIESMPIDPTSRVWGSLLTASRNQNDIDIA 599



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 11/232 (4%)

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            ++  D  + N +I  +A A     A   +  M     RP+  T   ++  C   G L+ 
Sbjct: 66  AVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGARPDRFTFPVVVKCCARLGGLDE 125

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G+  H  + K GLE DV    +LV  YAK G V  A R+F     RDI  WN M+ GY  
Sbjct: 126 GRAAHGMVIKLGLEHDVYTCNSLVAFYAKLGLVEDAERVFDGMPVRDIVTWNIMVDGYVS 185

Query: 455 HGCGEEALIFFVDMERS-GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GL 509
           +G G  AL  F +M  +  V+ + +  I  L AC       E  S+  K +HG     GL
Sbjct: 186 NGLGSLALACFQEMHDALEVQHDSVGIIAALAAC-----CLEFSSMQGKEIHGYVIRHGL 240

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
              I+    ++D+  + G +  A  +  +MPLR  ++ W  ++    L++ P
Sbjct: 241 EQDIKVGTSLLDMYCKCGEVAYARSVFATMPLR-TVVTWNCMIGGYALNERP 291



 Score = 42.0 bits (97), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 11/143 (7%)

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
           K+ +V + A+ G ++ A    +     D  + N M+ G+   G    AL  +  M   G 
Sbjct: 45  KSLVVSLAAE-GRMDEAVEALAAVRGPDAFLHNVMIRGFADAGLPAGALAAYRGMLEDGA 103

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH--YGC--MVDLLGRAGLL 529
           +P+  TF  ++  C+  G + EG++      HG+ +   +EH  Y C  +V    + GL+
Sbjct: 104 RPDRFTFPVVVKCCARLGGLDEGRA-----AHGMVIKLGLEHDVYTCNSLVAFYAKLGLV 158

Query: 530 DEAHEMIKSMPLRPNMIVWGALL 552
           ++A  +   MP+R +++ W  ++
Sbjct: 159 EDAERVFDGMPVR-DIVTWNIMV 180


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1047

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 198/593 (33%), Positives = 323/593 (54%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+L+    +      A+ ++  M+ +G E D+ T+ +++ AC+       G+++H +  
Sbjct: 340 YNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTT 399

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   +  +  AL+ +Y++C  + +A   F E    +VV W+ M+  Y        +  
Sbjct: 400 KLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 459

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R+M+  +I P++    S++     + D++LG+ IH+ +++     +L   + + LIDM
Sbjct: 460 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT--SFQLNAYVCSVLIDM 517

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G L  A  +  R     VVSWT MI+GY + N  ++ +  F +M++  +   E+ +
Sbjct: 518 YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 577

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            + +  C  +  L+ G+ +HA    +GF   L   NALV +Y KC  I  A   F+  ++
Sbjct: 578 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEA 637

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D + WNA++S + Q+   ++A  +F  M    +  N  T    +   +E   ++ GK +
Sbjct: 638 GDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQV 697

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I K G + +  +  A++ MYAKCG ++ A + F E   ++   WNAM+  Y  HG G
Sbjct: 698 HAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFG 757

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F  M  S V+PN +T +G+L+ACSH GLV +G   F+ M    GL PK EHY C
Sbjct: 758 SEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVC 817

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VD+L RAGLL  A + I  MP+ P+ +VW  LL+A  +HKN  +GE AA  +LE+EP++
Sbjct: 818 VVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPED 877

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VL+SN+YAV  +W+     R+ MKE  VKKEPG S +EV   +H F  G
Sbjct: 878 SATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 930



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 246/493 (49%), Gaps = 13/493 (2%)

Query: 73  TIPTILKAC-AQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE 131
           T   +L+AC    +   + ++IH   I  GL     V N LI +YS  G +  AR +FD 
Sbjct: 171 TFSGVLEACRGGSVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDG 230

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           +  +D  SW  MI G  +     EA+ +  +M  + I P+  A  S++S    +  +++G
Sbjct: 231 LYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG 290

Query: 192 KAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           + +H  V+      KLG +    +  AL+ +Y   G+L  A+ +F+ ++Q   V++  +I
Sbjct: 291 EQLHGLVL------KLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLI 344

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           +G  +C    + + LF  M  + + P   T+ SL++ C   G L  G+ LHAY  + GF 
Sbjct: 345 NGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFA 404

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
            +  +  AL+++Y KC +I +A   F   + ++V++WN ++ AY     +  +F +F  M
Sbjct: 405 SNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM 464

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           ++ ++ PN+ T   +L  C   G LE+G+ +H+ I K   +++  + + L+DMYAK G +
Sbjct: 465 QIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKL 524

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
           + A+ +      +D+  W  M+AGY  +   ++AL  F  M   G++ + +     ++AC
Sbjct: 525 DTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSAC 584

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           +    + EG+ +  +     G    +     +V L  + G ++EA+   +      N I 
Sbjct: 585 AGLQALKEGQQIHAQACVS-GFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDN-IA 642

Query: 548 WGALLAASKLHKN 560
           W AL++  +   N
Sbjct: 643 WNALVSGFQQSGN 655



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 226/458 (49%), Gaps = 12/458 (2%)

Query: 2   KIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAF 61
           KI+   LNL    +C    I+T   +     +  +  +N ++ +Y   +   ++  I+  
Sbjct: 408 KIEGALLNL--YAKCSD--IETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQ 463

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           M+      + +T P+ILK C ++    LG++IH   IK     +AYV + LI MY++ G 
Sbjct: 464 MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGK 523

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           L +A  +      +DVVSW+TMI GY +    ++AL   R+M    IR  EV + + VS 
Sbjct: 524 LDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 583

Query: 182 FADVADVDLGKAIH--ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
            A +  +  G+ IH  ACV     D    +    AL+ +YSKCGN+  A   F +     
Sbjct: 584 CAGLQALKEGQQIHAQACVSGFSSD----LPFQNALVTLYSKCGNIEEAYLAFEQTEAGD 639

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
            ++W  ++SG+ +     E +R+FA M  E +  +  T  S +        ++ GK +HA
Sbjct: 640 NIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQVHA 699

Query: 300 YILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
            I + G++    + NA++ MY KC  I  A+  F  +  K+ + WNA+I+AY++     +
Sbjct: 700 VITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAYSKHGFGSE 759

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALV 418
           A + F  M  S VRPN VT+VG+LS C+  G ++ G ++  +   + GL         +V
Sbjct: 760 ALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMNTEYGLAPKPEHYVCVV 819

Query: 419 DMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
           DM  + G ++ A     E  I  D  +W  +++   +H
Sbjct: 820 DMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVH 857



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 229/470 (48%), Gaps = 13/470 (2%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G+++H   +K G D +A +S  L+  Y   G L  A  +FDEMP R + +W+ MI+    
Sbjct: 87  GRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKELAS 146

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMV-SLFADVADVDLGKAIHACVVRNCKDEKLG 208
             L  +   +   M   ++ P+E     ++ +        D+ + IHA ++     + LG
Sbjct: 147 RSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIY----QGLG 202

Query: 209 VA--IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
            +  +   LID+YS+ G +  A+++F+ L      SW  MISG  +     E +RLF +M
Sbjct: 203 KSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDM 262

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
               + P+     S++  C  +  L++G+ LH  +L+ GF     + NALV +Y     +
Sbjct: 263 YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSL 322

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
            SA  +F  M  +D + +N +I+  +Q    +KA ELF  M++  + P+  T+  L+  C
Sbjct: 323 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVAC 382

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
           +  G L  G+ LH Y  K G   +  ++ AL+++YAKC D+  A   F E    ++ +WN
Sbjct: 383 SSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWN 442

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
            M+  YG+      +   F  M+   + PN  T+  +L  C   G +  G+ +  +++  
Sbjct: 443 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK- 501

Query: 507 LGLVPKIEHYGC--MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
                ++  Y C  ++D+  + G LD A +++     + +++ W  ++A 
Sbjct: 502 --TSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG 548



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 117/255 (45%), Gaps = 2/255 (0%)

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
           G L  G+ LH+ IL+ GF+ +  ++  L+D Y    ++  A  +FD M  + +  WN +I
Sbjct: 82  GSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMI 141

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG-ALEMGKWLHTYIEKQGL 407
              A      K F LF  M    V PNE T  G+L  C     A ++ + +H  I  QGL
Sbjct: 142 KELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIYQGL 201

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
               I+   L+D+Y++ G V+ A R+F     +D   W AM++G   + C  EA+  F D
Sbjct: 202 GKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCD 261

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           M   G+ P    F  +L+AC     +  G+ +   +V  LG          +V L    G
Sbjct: 262 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG-LVLKLGFSSDTYVCNALVSLYFHLG 320

Query: 528 LLDEAHEMIKSMPLR 542
            L  A  +  +M  R
Sbjct: 321 SLISAEHIFSNMSQR 335



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 12/222 (5%)

Query: 372 VRPNEVTMVGLLSLCTEA-GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
           +RPN  T+  LL  C +  G+L+ G+ LH+ I K G + +  L   L+D Y   GD++GA
Sbjct: 63  IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGA 122

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
            ++F E   R I  WN M+          +    F  M    V PN  TF G+L AC   
Sbjct: 123 LKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGG 182

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
            +  +        +   GL         ++DL  R G +D A  +   + L+ +   W A
Sbjct: 183 SVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHS-SWVA 241

Query: 551 LLAASKLHKNPSMGEIAATQ------ILEIEPQNYGYNVLMS 586
           ++  S L KN    E+ A +      +L I P  Y ++ ++S
Sbjct: 242 MI--SGLSKNEC--EVEAIRLFCDMYVLGIMPTPYAFSSVLS 279


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 200/595 (33%), Positives = 329/595 (55%), Gaps = 4/595 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++++Y+KN++   A+ ++  M  +G   + F    ++ AC        G+++HG  +
Sbjct: 173 WNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVV 232

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G + D + +NAL+ MYS+ G +  A  +F++MP  DVVSW+  I G    G    ALE
Sbjct: 233 RTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALE 292

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++ +M+   + P+   + S++   A     +LG+ IH  +V+   D      +A  L+DM
Sbjct: 293 LLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVAD--FDEFVAVGLVDM 350

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE--NVFPSEI 276
           Y+K G L  A+++F+ + +  ++ W  +ISG        E + LF  M +E  ++  +  
Sbjct: 351 YAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRT 410

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T+ S++        +   + +HA   + G      + N L+D Y KC ++  A  +F   
Sbjct: 411 TLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKES 470

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           +S D++    +++A +Q    + A +LF+ M    + P+   +  LL+ CT   A E GK
Sbjct: 471 RSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGK 530

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H ++ K+    DV    ALV  YAKCG +  A   FS    R I  W+AM+ G   HG
Sbjct: 531 QVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHG 590

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
            G+ AL  F  M   GV PN IT   +L+AC+HAGLV + K  F+ M    G+    EHY
Sbjct: 591 HGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHY 650

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            CM+D+LGRAG L++A E++ +MP + N  VWGALL AS++H++P +G +AA ++  +EP
Sbjct: 651 ACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELGRMAAEKLFTLEP 710

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +  G +VL++N YA A  W+++A VR++MK+  VKKEP  S VE+   VH FI G
Sbjct: 711 EKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDKVHTFIVG 765



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 157/537 (29%), Positives = 257/537 (47%), Gaps = 14/537 (2%)

Query: 29  YTNIINPL-TRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  I +P    ++SLVT+Y  N  P  AL  +  MR  G   + F +P +LK    V   
Sbjct: 60  FDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDV--- 116

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM----PNRDVVSWSTM 143
             G ++H  A+   L  D +V+NAL+ +Y   G +  AR +FDE       R+ VSW+TM
Sbjct: 117 RFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTM 176

Query: 144 IRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
           I  Y +     +A+ V REM +   RP+E     +V+      D++ G+ +H  VVR   
Sbjct: 177 ISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGY 236

Query: 204 DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
           ++   V  A AL+DMYSK G++  A  +F ++    VVSW   ISG +     +  + L 
Sbjct: 237 EKD--VFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELL 294

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
            +M    + P+  T+ S++  C   G   LG+ +H ++++   +F   +A  LVDMY K 
Sbjct: 295 LQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKH 354

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS--KVRPNEVTMVG 381
             +  AR +FD M  +D+++WNA+IS  +      +   LF  M+     +  N  T+  
Sbjct: 355 GFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLAS 414

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           +L     + A+   + +H   EK GL  D  +   L+D Y KCG ++ A ++F E+   D
Sbjct: 415 VLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDD 474

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           I     MM        GE+A+  FV M R G++P+      LLNAC+      +GK V  
Sbjct: 475 IISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHA 534

Query: 502 KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            ++        +     +V    + G +++A      +P R  ++ W A++     H
Sbjct: 535 HLIK-RQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPER-GIVSWSAMIGGLAQH 589



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/456 (30%), Positives = 230/456 (50%), Gaps = 18/456 (3%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G  +H   +K+GL   A  SN L+ +YS C    +AR +FDE+P+   VSWS+++  Y  
Sbjct: 23  GAHLHSHLLKSGLL--AGFSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSN 80

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV--RNCKDEKL 207
            G+P +AL   R MR   +  +E A+  ++       DV  G  +HA  V  R   D   
Sbjct: 81  NGMPRDALLAFRAMRGRGVPCNEFALPVVLKC---APDVRFGAQVHALAVATRLVHD--- 134

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRL----NQNSVVSWTVMISGYIRCNEINEGVRLF 263
            V +A AL+ +Y   G +  A+++F+       + + VSW  MIS Y++ ++  + + +F
Sbjct: 135 -VFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVF 193

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
            EM+     P+E     ++  C     L+ G+ +H  ++R G+E  +  ANALVDMY K 
Sbjct: 194 REMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKL 253

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
            +I  A T+F+ M + DV+ WNA IS         +A EL + MK S + PN  T+  +L
Sbjct: 254 GDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVL 313

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
             C  AGA  +G+ +H ++ K   + D  +   LVDMYAK G ++ A ++F     RD+ 
Sbjct: 314 KACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLI 373

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSG--VKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           +WNA+++G    G   E L  F  M + G  +  N  T   +L + + +  +   + V  
Sbjct: 374 LWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQVH- 432

Query: 502 KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK 537
            +   +GL+        ++D   + G LD A ++ K
Sbjct: 433 ALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFK 468



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/319 (25%), Positives = 158/319 (49%), Gaps = 6/319 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVD--NFTIPTILKACAQVLMTHLGKEI 93
           L  +N+L++    + +    L+++  MRK G ++D    T+ ++LK+ A        +++
Sbjct: 372 LILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTRQV 431

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           H  A K GL  D++V N LI  Y +CG L  A  +F E  + D++S +TM+    +    
Sbjct: 432 HALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTALSQCDHG 491

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           E+A+++  +M    + P    + S+++    ++  + GK +HA +++  +     V    
Sbjct: 492 EDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIK--RQFTSDVFAGN 549

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+  Y+KCG++  A   F+ L +  +VSW+ MI G  +       + LF  M++E V P
Sbjct: 550 ALVYAYAKCGSIEDADMAFSGLPERGIVSWSAMIGGLAQHGHGKRALDLFHRMLDEGVAP 609

Query: 274 SEITILSLIIECGFVGGL-QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           + IT+ S++  C   G +    K+  +     G + +      ++D+ G+  ++  A  L
Sbjct: 610 NHITLTSVLSACNHAGLVDDAKKYFESMKETFGIDRTEEHYACMIDILGRAGKLEDAMEL 669

Query: 333 FDGMK-SKDVMIWNAVISA 350
            + M    +  +W A++ A
Sbjct: 670 VNNMPFQANAAVWGALLGA 688


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 204/600 (34%), Positives = 344/600 (57%), Gaps = 8/600 (1%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           ++ +   N +++ Y+   + S+ L  +  M ++  E D  T   +L    ++    LG++
Sbjct: 284 VSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQ 343

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H  A+K GLD    VSN+LI MY +   +  AR +F+ M  RD++SW+++I G  +  L
Sbjct: 344 VHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDL 403

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD-VDLGKAIHACVVR--NCKDEKLGV 209
             EA+ +  ++    ++P    M S++   + + + + L K IH   ++  N  D     
Sbjct: 404 EVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADS---- 459

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            ++TALID YS+   +  A+ LF R N   +V+W  M+SGY + ++ ++ + LFA M ++
Sbjct: 460 FVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQ 518

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
                + T+ +++  CGF+  +  GK +HAY +++G++  L +++ ++DMY KC ++ +A
Sbjct: 519 GERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 578

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           +  FD +   D + W  +IS   +    ++A  +F  M++  V P+E T+  L    +  
Sbjct: 579 QFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCL 638

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            ALE G+ +H    K     D  + T+LVDMYAKCG ++ AY LF      +I  WNAM+
Sbjct: 639 TALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAML 698

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
            G   HG G+EAL  F  ME  G+KP+ +TFIG+L+ACSH+GLV+E       M    G+
Sbjct: 699 VGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGI 758

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            P+IEHY C+ D LGRAGL+ EA  +I SM +  +  ++  LLAA ++  +   G+  AT
Sbjct: 759 KPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVAT 818

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           ++LE+EP +    VL+SN+YA A++W+++   R +MK  +VKK+PGFS +EV   +H F+
Sbjct: 819 KLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFV 878



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 131/524 (25%), Positives = 247/524 (47%), Gaps = 43/524 (8%)

Query: 36  LTRYNSLVTSYIKNNKP-----SSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           L  +NS++ +Y ++++        A  ++  +R++       T+  +LK C         
Sbjct: 112 LVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCAS 171

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           +  HG+A K GLDGD +V+ AL+ +Y + G +   R LF+EMP RDVV W+ M++ Y   
Sbjct: 172 ESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEM 231

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           G  EEA+++        + P+E+ +  +  +  D ++    K+                 
Sbjct: 232 GFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFEN-------------- 277

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
                       GN A A         + ++S   ++SGY+   + +  ++ F +M+E +
Sbjct: 278 ------------GNDASA--------VSEIISRNKILSGYLHAGQYSALLKCFMDMVESD 317

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           +   ++T + ++     +  L LG+ +H   L+ G +  L ++N+L++MY K R+I  AR
Sbjct: 318 LECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLAR 377

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE-A 389
           T+F+ M  +D++ WN+VI+  AQ+    +A  LF+ +    ++P+  TM  +L   +   
Sbjct: 378 TVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLP 437

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
             L + K +H +  K     D  + TAL+D Y++   +  A  LF    + D+  WNAMM
Sbjct: 438 EGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNF-DLVAWNAMM 496

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           +GY     G + L  F  M + G + +  T   +L  C     + +GK V    +   G 
Sbjct: 497 SGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKS-GY 555

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
              +     ++D+  + G +  A     S+P+ P+ + W  L++
Sbjct: 556 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTLIS 598



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 214/445 (48%), Gaps = 10/445 (2%)

Query: 117 SECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMI 176
           SE G + S     D     +++S + ++ GY   G     L+   +M   D+   +V  I
Sbjct: 267 SEAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFI 326

Query: 177 SMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLN 236
            +++    +  + LG+ +H   ++   D  L + ++ +LI+MY K   +  A+ +FN ++
Sbjct: 327 LVLATAVRLDSLALGQQVHCMALKLGLD--LMLTVSNSLINMYCKLRKIGLARTVFNNMS 384

Query: 237 QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI-IECGFVGGLQLGK 295
           +  ++SW  +I+G  + +   E V LF +++   + P   T+ S++        GL L K
Sbjct: 385 ERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSK 444

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
            +H + ++        ++ AL+D Y + R ++ A  LF G  + D++ WNA++S Y Q+H
Sbjct: 445 QIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLF-GRNNFDLVAWNAMMSGYTQSH 503

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
              K  ELF  M     R ++ T+  +L  C    A+  GK +H Y  K G ++D+ + +
Sbjct: 504 DGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 563

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
            ++DMY KCGD++ A   F      D   W  +++G   +G  E AL  F  M   GV P
Sbjct: 564 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLP 623

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY--GCMVDLLGRAGLLDEAH 533
           +  T   L  A S    + +G+ +     + L L    + +    +VD+  + G +D+A+
Sbjct: 624 DEFTIATLAKASSCLTALEQGRQIH---ANALKLNCTSDPFVGTSLVDMYAKCGSIDDAY 680

Query: 534 EMIKSMPLRPNMIVWGALLAASKLH 558
            + K + +  N+  W A+L     H
Sbjct: 681 CLFKRIEMM-NITAWNAMLVGLAQH 704



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 112/475 (23%), Positives = 212/475 (44%), Gaps = 51/475 (10%)

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           LGK  H   +    + + ++ N LI MYS+CGSL  AR +FD+MP RD+VSW++++  Y 
Sbjct: 64  LGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYA 123

Query: 149 RG--GLPE---EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH--ACVVRN 201
           +   G+ E   EA  + R +R   +  S + +  M+ L      V   ++ H  AC +  
Sbjct: 124 QSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGL 183

Query: 202 CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVR 261
             D+     +A AL+++Y K G +   + LF  +    VV W +M+  Y+      E + 
Sbjct: 184 DGDD----FVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 239

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           L +      + P+EIT                                L + + +     
Sbjct: 240 LSSAFHTSGLHPNEIT--------------------------------LRLLSRISGDDS 267

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           +  +++S     D     +++  N ++S Y  A       + F+ M  S +  ++VT + 
Sbjct: 268 EAGQVKSFENGNDASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFIL 327

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           +L+      +L +G+ +H    K GL++ + +  +L++MY K   +  A  +F+    RD
Sbjct: 328 VLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERD 387

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           +  WN+++AG        EA+  F+ + R G+KP+  T   +L A S    + EG S+  
Sbjct: 388 LISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASS---LPEGLSLSK 444

Query: 502 KM-VHGLGLVPKIEHY--GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           ++ VH +      + +    ++D   R   + EA  +        +++ W A+++
Sbjct: 445 QIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNF--DLVAWNAMMS 497



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 69/195 (35%), Positives = 101/195 (51%), Gaps = 5/195 (2%)

Query: 291 LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
           L LGK  HA IL         + N L+ MY KC  +  AR +FD M  +D++ WN++++A
Sbjct: 62  LMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAA 121

Query: 351 YAQA-----HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
           YAQ+       + +AF LF  ++   V  + +T+  +L LC  +G +   +  H Y  K 
Sbjct: 122 YAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKI 181

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
           GL+ D  +  ALV++Y K G V     LF E  YRD+ +WN M+  Y   G  EEA+   
Sbjct: 182 GLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLS 241

Query: 466 VDMERSGVKPNGITF 480
                SG+ PN IT 
Sbjct: 242 SAFHTSGLHPNEITL 256



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 174/377 (46%), Gaps = 47/377 (12%)

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
            +D+ LGK  HA ++    +E     +   LI MYSKCG+L YA+++F+++ +  +VSW 
Sbjct: 59  TSDLMLGKCTHARIL--ALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWN 116

Query: 245 VMISGYIRCNE-----INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
            +++ Y + +E     + E   LF  + ++ V+ S +T+  ++  C   G +   +  H 
Sbjct: 117 SILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHG 176

Query: 300 YILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
           Y  + G +    +A ALV++Y K  +++  R LF+ M  +DV++WN ++ AY +    ++
Sbjct: 177 YACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEE 236

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLC---TEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
           A +L      S + PNE+T+  L  +    +EAG                          
Sbjct: 237 AIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQ------------------------- 271

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
            V  +    D +      SE I R     N +++GY   G     L  F+DM  S ++ +
Sbjct: 272 -VKSFENGNDASAV----SEIISR-----NKILSGYLHAGQYSALLKCFMDMVESDLECD 321

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
            +TFI +L        +  G+ V   M   LGL   +     ++++  +   +  A  + 
Sbjct: 322 QVTFILVLATAVRLDSLALGQQVH-CMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVF 380

Query: 537 KSMPLRPNMIVWGALLA 553
            +M  R ++I W +++A
Sbjct: 381 NNMSER-DLISWNSVIA 396



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 7/179 (3%)

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
           G L        L +GK  H  I       +  L   L+ MY+KCG +  A R+F +   R
Sbjct: 51  GFLRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPER 110

Query: 441 DICMWNAMMAGYGMHGCG-----EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
           D+  WN+++A Y     G     +EA + F  + +  V  + +T   +L  C H+G V  
Sbjct: 111 DLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCA 170

Query: 496 GKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            +S F      +GL       G +V++  + G + E   + + MP R ++++W  +L A
Sbjct: 171 SES-FHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYR-DVVLWNLMLKA 227


>gi|297798412|ref|XP_002867090.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312926|gb|EFH43349.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 803

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 201/578 (34%), Positives = 323/578 (55%), Gaps = 6/578 (1%)

Query: 55  ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
           AL +Y  M  +G + D+FT P ++K+   +     GK+IH   IK     D YV N+LI 
Sbjct: 110 ALQLYCRMVFSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSDVYVCNSLIS 169

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           +Y + G    A  +F+EMP RD+VSW++MI GY        +L + +EM     +P   +
Sbjct: 170 LYMKLGCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFS 229

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
            +S +   + V   ++GK +H   VR+ + E   V + T+++DMYSK G ++YA+++F  
Sbjct: 230 TMSALGACSHVYSPNMGKELHCHAVRS-RIETGDVMVMTSILDMYSKYGEVSYAERIFKC 288

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN-VFPSEITILSLIIECGFVGGLQL 293
           + Q ++V+W V+I  Y R + + +    F +M E+N + P  IT+++L+  C  + G   
Sbjct: 289 IIQRNIVAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPACAILEG--- 345

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
            + +H Y +R GF   + +  AL+DMYG+  +++SA  +FD +  K+++ WN++I+AY Q
Sbjct: 346 -RTIHGYAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQ 404

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
                 A ELF  +  S + P+  T+  +L    E+ +L  G+ +H YI K     + I+
Sbjct: 405 NGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTII 464

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
             +LV MYA CGD+  A + F+  + +D+  WN+++  Y +HG G  ++  F +M  S V
Sbjct: 465 LNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKV 524

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
            PN  TF  LL ACS +G+V EG   F+ M    G+ P IEHYG M+DL+GR G    A 
Sbjct: 525 DPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAK 584

Query: 534 EMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVAN 593
             I+ MP  P   +WG+LL AS+ H + ++ E AA QI ++E  N G  VL+ N+YA A 
Sbjct: 585 RFIREMPFLPTARIWGSLLNASRNHNDITVAEFAAEQIFKMEHDNTGCYVLLLNMYAEAR 644

Query: 594 RWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           RW DV  ++ +M+   + +    S+VE     H    G
Sbjct: 645 RWEDVNRIKLLMESKGISRTSSRSTVEAKSKTHVLTNG 682



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 229/465 (49%), Gaps = 29/465 (6%)

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           D  ++ AL + +++ G +  A  LFDEM   D   W+ MI+G+   GL  EAL++   M 
Sbjct: 60  DPALTRAL-RGFADSGLMEDALQLFDEMNKADTFVWNVMIKGFTSCGLYFEALQLYCRMV 118

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV--RNCKDEKLGVAIATALIDMYSKC 222
           F  ++        ++     ++ ++ GK IHA V+  R   D    V +  +LI +Y K 
Sbjct: 119 FSGVKADSFTYPFVIKSVTGISSLEEGKKIHAMVIKLRFVSD----VYVCNSLISLYMKL 174

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI 282
           G    A+++F  + +  +VSW  MISGY+   +    + LF EM++    P   + +S +
Sbjct: 175 GCSWDAEKVFEEMPERDIVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSAL 234

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMA-NALVDMYGKCREIRSARTLFDGMKSKDV 341
             C  V    +GK LH + +R+  E    M   +++DMY K  E+  A  +F  +  +++
Sbjct: 235 GACSHVYSPNMGKELHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNI 294

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           + WN +I  YA+   +  AF  F  M + + ++P+ +T++ LL  C    A+  G+ +H 
Sbjct: 295 VAWNVLIGCYARNSRVTDAFLCFQKMSEQNGLQPDVITLINLLPAC----AILEGRTIHG 350

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
           Y  ++G    ++L TAL+DMY + G +  A  +F     +++  WN+++A Y  +G    
Sbjct: 351 YAMRRGFLPHIVLDTALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYS 410

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG--- 517
           AL  F  +  S + P+  T   +L A + +  ++EG+ +   +V           YG   
Sbjct: 411 ALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHAYIVKS--------RYGSNT 462

Query: 518 ----CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
                +V +    G L++A +    + L+ +++ W +++ A  +H
Sbjct: 463 IILNSLVHMYAMCGDLEDARKCFNHVLLK-DVVSWNSIIMAYAVH 506



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 234/464 (50%), Gaps = 35/464 (7%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPL------------------------ 36
           +K   G  +LE+ ++ HA +IK  F  S   + N L                        
Sbjct: 133 IKSVTGISSLEEGKKIHAMVIKLRF-VSDVYVCNSLISLYMKLGCSWDAEKVFEEMPERD 191

Query: 37  -TRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
              +NS+++ Y+       +L ++  M K G + D F+  + L AC+ V   ++GKE+H 
Sbjct: 192 IVSWNSMISGYLALEDGFRSLMLFKEMLKFGFKPDRFSTMSALGACSHVYSPNMGKELHC 251

Query: 96  FAIKNGLD-GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
            A+++ ++ GD  V  +++ MYS+ G +  A  +F  +  R++V+W+ +I  Y R     
Sbjct: 252 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFKCIIQRNIVAWNVLIGCYARNSRVT 311

Query: 155 EALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           +A    ++M   + ++P  + +I+++   A +     G+ IH   +R  +     + + T
Sbjct: 312 DAFLCFQKMSEQNGLQPDVITLINLLPACAILE----GRTIHGYAMR--RGFLPHIVLDT 365

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALIDMY + G L  A+ +F+R+ + +++SW  +I+ Y++  +    + LF ++ + ++ P
Sbjct: 366 ALIDMYGEWGQLKSAEVIFDRIAEKNLISWNSIIAAYVQNGKNYSALELFQKLWDSSLLP 425

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              TI S++        L  G+ +HAYI+++ +  +  + N+LV MY  C ++  AR  F
Sbjct: 426 DSTTIASILPAYAESLSLSEGRQIHAYIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCF 485

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + +  KDV+ WN++I AYA       +  LF  M  SKV PN+ T   LL+ C+ +G ++
Sbjct: 486 NHVLLKDVVSWNSIIMAYAVHGFGRISVCLFSEMIASKVDPNKSTFASLLAACSISGMVD 545

Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
            G ++  +   + G++  +     ++D+  + G+ + A R   E
Sbjct: 546 EGWEYFESMKREYGIDPGIEHYGYMLDLIGRTGNFSSAKRFIRE 589



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 102/200 (51%), Gaps = 1/200 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NS++ +Y++N K  SAL ++  +  +    D+ TI +IL A A+ L    G++IH 
Sbjct: 392 LISWNSIIAAYVQNGKNYSALELFQKLWDSSLLPDSTTIASILPAYAESLSLSEGRQIHA 451

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + +K+    +  + N+L+ MY+ CG L  AR  F+ +  +DVVSW+++I  Y   G    
Sbjct: 452 YIVKSRYGSNTIILNSLVHMYAMCGDLEDARKCFNHVLLKDVVSWNSIIMAYAVHGFGRI 511

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           ++ +  EM    + P++    S+++  +    VD G      + R    +  G+     +
Sbjct: 512 SVCLFSEMIASKVDPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDP-GIEHYGYM 570

Query: 216 IDMYSKCGNLAYAKQLFNRL 235
           +D+  + GN + AK+    +
Sbjct: 571 LDLIGRTGNFSSAKRFIREM 590


>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03380, mitochondrial; Flags: Precursor
 gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
 gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 203/581 (34%), Positives = 321/581 (55%), Gaps = 6/581 (1%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           ++  Y  N +    + +Y  + K+G   D+      LKAC ++     GK+IH   +K  
Sbjct: 113 MLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP 172

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
              D  V   L+ MY++CG + SA  +F+++  R+VV W++MI GY +  L EE L +  
Sbjct: 173 -SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFN 231

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
            MR  ++  +E    +++     ++ +  GK  H C+V++    +L   + T+L+DMY K
Sbjct: 232 RMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKS--GIELSSCLVTSLLDMYVK 289

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
           CG+++ A+++FN  +   +V WT MI GY     +NE + LF +M    + P+ +TI S+
Sbjct: 290 CGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASV 349

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +  CG +  L+LG+ +H   ++ G  +   +ANALV MY KC + R A+ +F+    KD+
Sbjct: 350 LSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDI 408

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           + WN++IS ++Q   I +A  LF  M    V PN VT+  L S C   G+L +G  LH Y
Sbjct: 409 VAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAY 468

Query: 402 IEKQGL--EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
             K G      V + TAL+D YAKCGD   A  +F     ++   W+AM+ GYG  G   
Sbjct: 469 SVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTI 528

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
            +L  F +M +   KPN  TF  +L+AC H G+V EGK  F  M       P  +HY CM
Sbjct: 529 GSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCM 588

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNY 579
           VD+L RAG L++A ++I+ MP++P++  +GA L    +H    +GEI   ++L++ P + 
Sbjct: 589 VDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDA 648

Query: 580 GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
            Y VL+SN+YA   RWN    VR +MK+  + K  G S++E
Sbjct: 649 SYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 150/468 (32%), Positives = 239/468 (51%), Gaps = 12/468 (2%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           ++ HG    NGL GD  ++  L+ +Y   G    AR +FD++P  D   W  M+R Y   
Sbjct: 61  RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCY--- 117

Query: 151 GLPEEALEVMREMRFM---DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
            L +E++EV++    +     R  ++     +    ++ D+D GK IH  +V   K    
Sbjct: 118 CLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV---KVPSF 174

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
              + T L+DMY+KCG +  A ++FN +   +VV WT MI+GY++ +   EG+ LF  M 
Sbjct: 175 DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR 234

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
           E NV  +E T  +LI+ C  +  L  GKW H  ++++G E S  +  +L+DMY KC +I 
Sbjct: 235 ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDIS 294

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           +AR +F+     D+++W A+I  Y     +++A  LF  MK  +++PN VT+  +LS C 
Sbjct: 295 NARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCG 354

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
               LE+G+ +H    K G+  D  +  ALV MYAKC     A  +F     +DI  WN+
Sbjct: 355 LIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNS 413

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           +++G+  +G   EAL  F  M    V PNG+T   L +AC+  G +  G S+    V   
Sbjct: 414 IISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLG 473

Query: 508 GLVPKIEHYG-CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            L     H G  ++D   + G    A  +  ++    N I W A++  
Sbjct: 474 FLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE-EKNTITWSAMIGG 520



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 233/424 (54%), Gaps = 13/424 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + S++  Y+KN+     L ++  MR+N    + +T  T++ AC ++   H GK  HG  +
Sbjct: 210 WTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLV 269

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G++  + +  +L+ MY +CG + +AR +F+E  + D+V W+ MI GY   G   EAL 
Sbjct: 270 KSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALS 329

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV---AIATAL 215
           + ++M+ ++I+P+ V + S++S    + +++LG+++H   +      K+G+    +A AL
Sbjct: 330 LFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSI------KVGIWDTNVANAL 383

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           + MY+KC     AK +F   ++  +V+W  +ISG+ +   I+E + LF  M  E+V P+ 
Sbjct: 384 VHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNG 443

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGF--EFSLAMANALVDMYGKCREIRSARTLF 333
           +T+ SL   C  +G L +G  LHAY ++ GF    S+ +  AL+D Y KC + +SAR +F
Sbjct: 444 VTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIF 503

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           D ++ K+ + W+A+I  Y +      + ELF  M   + +PNE T   +LS C   G + 
Sbjct: 504 DTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVN 563

Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAG 451
            G K+  +  +           T +VDM A+ G++  A  +  +  I  D+  + A + G
Sbjct: 564 EGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHG 623

Query: 452 YGMH 455
            GMH
Sbjct: 624 CGMH 627



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 189/375 (50%), Gaps = 6/375 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + +++  Y  N   + AL+++  M+    + +  TI ++L  C  +    LG+ +HG
Sbjct: 308 LVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHG 367

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            +IK G+  D  V+NAL+ MY++C     A+Y+F+    +D+V+W+++I G+ + G   E
Sbjct: 368 LSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHE 426

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL +   M    + P+ V + S+ S  A +  + +G ++HA  V+        V + TAL
Sbjct: 427 ALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTAL 486

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +D Y+KCG+   A+ +F+ + + + ++W+ MI GY +  +    + LF EM+++   P+E
Sbjct: 487 LDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNE 546

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFD 334
            T  S++  CG  G +  GK   + + ++  F  S      +VDM  +  E+  A  + +
Sbjct: 547 STFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIE 606

Query: 335 GMK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS-LCTEAGAL 392
            M    DV  + A +         D   E+ I  K+  + P++ +   L+S L    G  
Sbjct: 607 KMPIQPDVRCFGAFLHGCGMHSRFDLG-EIVIK-KMLDLHPDDASYYVLVSNLYASDGRW 664

Query: 393 EMGKWLHTYIEKQGL 407
              K +   ++++GL
Sbjct: 665 NQAKEVRNLMKQRGL 679


>gi|225438700|ref|XP_002277701.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
          Length = 1008

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/587 (33%), Positives = 336/587 (57%), Gaps = 6/587 (1%)

Query: 36   LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
            L  +NS+++ Y  N    ++++ +  M+  G + D  +I  IL AC+++    LGK  H 
Sbjct: 423  LLSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKAAHA 482

Query: 96   FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            F+ +   D +  +SNAL+  YS+CG L S+  LF +MP R+ +SW+T+I G    G  ++
Sbjct: 483  FSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKK 542

Query: 156  ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            A+ ++ +M+   +    V +IS++ +     ++  G  +H   ++        V++  AL
Sbjct: 543  AVALLHKMQQEKMELDLVTLISIIPICRVAENLIQGMTLHGYAIKT--GFACDVSLVNAL 600

Query: 216  IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
            I MY  CG++   K LF  +   S+VSW  +I+GY      NE +  F +MI E   P+ 
Sbjct: 601  ISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMASFCQMIREGQKPNY 660

Query: 276  ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            +T+L+L+  C     L  GK +HA+ +R G      +  +L+ MY +   I S   LF+ 
Sbjct: 661  VTLLNLLPSCR---TLLQGKSIHAFAVRTGVIVETPIITSLISMYARFENINSFIFLFEM 717

Query: 336  MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
               +D+ +WNA++S Y Q     ++   F  +  ++V P+ +T + L+S C +  +L + 
Sbjct: 718  GGKEDIALWNAIMSVYVQTKNAKESVTFFCELLHARVEPDYITFLSLISACVQLSSLNLS 777

Query: 396  KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
              +  Y+ ++G +  +++  AL+D++A+CG+++ A ++F     +D   W+ M+ GYG+H
Sbjct: 778  NSVMAYVIQKGFDKHIVISNALIDLFARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLH 837

Query: 456  GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
            G  E AL     M  SG+KP+GIT+  +L+ACSH G + +G  +F+ MV   G+  ++EH
Sbjct: 838  GDSEAALALLSQMRLSGMKPDGITYASVLSACSHGGFIDQGWMIFNSMVEE-GVPRRMEH 896

Query: 516  YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
            Y CMVDLLGR G L+EA++ ++ +P +P++ +  +LL A  +H N  +GE  ++ + E++
Sbjct: 897  YACMVDLLGRTGQLNEAYDFVEKLPCKPSVSLLESLLGACIIHGNVKLGEKISSLLFELD 956

Query: 576  PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
            P+N G  V++ NIYA A RW D   VR  M+E +++K PGFS VE N
Sbjct: 957  PKNSGSYVMLYNIYAAAGRWMDANRVRSDMEERQLRKIPGFSLVEGN 1003



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 148/535 (27%), Positives = 253/535 (47%), Gaps = 32/535 (5%)

Query: 25  FKFSYTNIINPLTRYNSLVTSYIKNNKP--SSALNIYAFMRKNGSEVDNFTIPTILKACA 82
           F+FS+      LT +++    +IKN     SS   + +F+R             +   C 
Sbjct: 24  FRFSFAFPFTNLTSFSN--KQFIKNTSKHNSSNPKVTSFLR-------------LFDLCR 68

Query: 83  QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
            +      K +    I   L  D YV    I      G+   A   F+ +    V   + 
Sbjct: 69  NIENL---KPLGSVLIVRDLMRDEYVVAEFIISCFHLGAPELALSAFEAIEKPSVFLQNL 125

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           MIR     GL E+ L V  + R +     +     ++     +  V + + +H  V+R  
Sbjct: 126 MIRRLCDHGLFEDVLCVYLKCRVLGCPSDDFTFPFVIKACTALGAVWIAEGVHCIVLRTS 185

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
            +E L   I TAL+D Y+K G +  A+ + ++++Q  +V+W  +ISGY       E   +
Sbjct: 186 FEENL--VIQTALVDFYAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEV 243

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
             ++ E  + P+  T  S+I  C  +  L +GK +H +++++GF     +  AL+ MY  
Sbjct: 244 LRQINEMGLKPNVSTFASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAG 303

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
              +  AR LFD    K+V+IWN++ISAYAQ     +AF++F  M  + ++PN VT V +
Sbjct: 304 GGNLFIARDLFDSAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSI 363

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           +  C  +     GK LH ++ K  L+  + + TAL+ MYAK GD+N A  +F +   R++
Sbjct: 364 IPCCENSANFWYGKSLHAHVMKYRLDSQLSVATALLSMYAKLGDLNSADFIFYQMPRRNL 423

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             WN+M++GYG +G  E ++  F DM+  G  P+ I+ + +L+ACS    +  GK+    
Sbjct: 424 LSWNSMISGYGHNGLWEASMDAFCDMQFEGFDPDAISIVNILSACSKLEAILLGKA---- 479

Query: 503 MVHGLGLVPKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
             H      + +        ++      G L  + ++ + MPLR N I W  L++
Sbjct: 480 -AHAFSFRKEFDSNLNISNALLAFYSDCGKLSSSFKLFQKMPLR-NAISWNTLIS 532


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 220/632 (34%), Positives = 347/632 (54%), Gaps = 47/632 (7%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           +PLT  +S   SY  +  PSS+   Y  +R + S        ++L  C  +    +   I
Sbjct: 6   SPLTVPSS---SYPFHFLPSSSDPPYDSIRNHPSL-------SLLHNCKTLQSLRI---I 52

Query: 94  HGFAIKNGLDGDAYVSNALIQ---MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           H   IK GL    Y  + LI+   +      L  A  +F  +   +++ W+TM RG+   
Sbjct: 53  HAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALS 112

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NC------- 202
             P  AL++   M  + + P+      ++   A       G+ IH  V++  C       
Sbjct: 113 SDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVH 172

Query: 203 ---------------------KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
                                K     V   TALI  Y+  G +  A++LF+ +    VV
Sbjct: 173 TSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVV 232

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           SW  MISGY       E + LF +M++ NV P E T+++++  C   G ++LG+ +H +I
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
             +GF  +L + NAL+D+Y KC E+ +A  LF+ +  KDV+ WN +I  Y   +   +A 
Sbjct: 293 DDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEAL 352

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK--QGLEVDVILKTALVD 419
            LF  M  S   PN+VTM+ +L  C   GA+++G+W+H YI+K  +G+     L+T+L+D
Sbjct: 353 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 412

Query: 420 MYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGIT 479
           MYAKCGD+  A+++F+  +++ +  WNAM+ G+ MHG  + +   F  M + G++P+ IT
Sbjct: 413 MYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDIT 472

Query: 480 FIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM 539
           F+GLL+ACSH+G++  G+ +F  M     + PK+EHYGCM+DLLG +GL  EA EMI  M
Sbjct: 473 FVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMM 532

Query: 540 PLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVA 599
            + P+ ++W +LL A K+H N  +GE  A  +++IEP+N G  VL+SNIYA A RWN+VA
Sbjct: 533 EMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVA 592

Query: 600 GVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             R ++ +  +KK PG SS+E++ +VH+FI G
Sbjct: 593 KTRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 624



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 146/263 (55%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +N++++ Y +      AL ++  M K     D  T+ T++ ACAQ     LG++
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H +   +G   +  + NALI +YS+CG L +A  LF+ +P +DV+SW+T+I GY    L
Sbjct: 288 VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNL 347

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            +EAL + +EM      P++V M+S++   A +  +D+G+ IH  + +  K      ++ 
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 407

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T+LIDMY+KCG++  A Q+FN +   S+ SW  MI G+      +    LF+ M +  + 
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467

Query: 273 PSEITILSLIIECGFVGGLQLGK 295
           P +IT + L+  C   G L LG+
Sbjct: 468 PDDITFVGLLSACSHSGMLDLGR 490


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 209/652 (32%), Positives = 341/652 (52%), Gaps = 76/652 (11%)

Query: 31  NIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
            I + +T YN+ +  + +     +A+ +    +K  SE++  T  ++L+ CA +     G
Sbjct: 61  TIDHQVTDYNAKILHFCQLGDLENAMELICMCKK--SELETKTYSSVLQLCAGLKSFTDG 118

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY----------------------- 127
           K++H     N +  D  +   L+  Y+ CG L   R                        
Sbjct: 119 KKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKI 178

Query: 128 ----------------------------LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
                                       LFD++ +RDV+SW++MI GY   GL E  L +
Sbjct: 179 GDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGI 238

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
            ++M ++ I      +IS++   A+   + LGKA+H+  +++  + ++    +  L+DMY
Sbjct: 239 YKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRIN--FSNTLLDMY 296

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
           SKCG+L  A ++F ++ + +VVSWT MI+GY R    +  ++L  +M +E V    + I 
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAIT 356

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           S++  C   G L  GK +H YI  N  E +L + NAL+DMY KC  + +A ++F  M  K
Sbjct: 357 SILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVK 416

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           D++ WN +I                      +++P+  TM  +L  C    ALE GK +H
Sbjct: 417 DIISWNTMIG---------------------ELKPDSRTMACVLPACASLSALERGKEIH 455

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
            YI + G   D  +  ALVD+Y KCG +  A  LF     +D+  W  M+AGYGMHG G 
Sbjct: 456 GYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGN 515

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           EA+  F +M  +G++P+ ++FI +L ACSH+GL+ +G   F  M +   + PK+EHY CM
Sbjct: 516 EAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACM 575

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNY 579
           VDLL R G L +A+E I+++P+ P+  +WGALL   + + +  + E  A ++ E+EP+N 
Sbjct: 576 VDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENS 635

Query: 580 GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           GY VL++NIYA A +W +V  +R  + +  ++K PG S +E+ G V+ F+ G
Sbjct: 636 GYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSG 687


>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
 gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g22410, mitochondrial; Flags: Precursor
 gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
 gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
 gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
 gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
          Length = 681

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 210/594 (35%), Positives = 328/594 (55%), Gaps = 49/594 (8%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYL------F 129
           ++L+ C   L+ HL K+I    I NGL  D + S+ LI     C +L  +RYL       
Sbjct: 58  SLLEKCK--LLLHL-KQIQAQMIINGLILDPFASSRLIAF---C-ALSESRYLDYSVKIL 110

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR---FMDIRPSEVAMISMVSLFADVA 186
             + N ++ SW+  IRG+     P+E+  + ++M      + RP       +  + AD+ 
Sbjct: 111 KGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLR 170

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
              LG  I   V++     +L   +  A I M++ CG++  A+++F+      +VSW  +
Sbjct: 171 LSSLGHMILGHVLK--LRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCL 228

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           I+GY +  E  + + ++  M  E V P ++T++ L+  C  +G L  GK  + Y+  NG 
Sbjct: 229 INGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGL 288

Query: 307 EFSLAMANALVDMYGKCREIRSAR-------------------------------TLFDG 335
             ++ + NAL+DM+ KC +I  AR                                LFD 
Sbjct: 289 RMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDD 348

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M+ KDV++WNA+I    QA     A  LF  M+ S  +P+E+TM+  LS C++ GAL++G
Sbjct: 349 MEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG 408

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
            W+H YIEK  L ++V L T+LVDMYAKCG+++ A  +F     R+   + A++ G  +H
Sbjct: 409 IWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALH 468

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G    A+ +F +M  +G+ P+ ITFIGLL+AC H G++  G+  F +M     L P+++H
Sbjct: 469 GDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKH 528

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y  MVDLLGRAGLL+EA  +++SMP+  +  VWGALL   ++H N  +GE AA ++LE++
Sbjct: 529 YSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELD 588

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           P + G  VL+  +Y  AN W D    RR+M E  V+K PG SS+EVNG+V +FI
Sbjct: 589 PSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFI 642



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 145/480 (30%), Positives = 252/480 (52%), Gaps = 42/480 (8%)

Query: 32  IINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNG---SEVDNFTIPTILKACAQVLMT 87
           I NP +  +N  +  + ++  P  +  +Y  M ++G   S  D+FT P + K CA + ++
Sbjct: 113 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 172

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
            LG  I G  +K  L+  ++V NA I M++ CG + +AR +FDE P RD+VSW+ +I GY
Sbjct: 173 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 232

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
            + G  E+A+ V + M    ++P +V MI +VS  + + D++ GK  +  V  N    ++
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN--GLRM 290

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN---------- 257
            + +  AL+DM+SKCG++  A+++F+ L + ++VSWT MISGY RC  ++          
Sbjct: 291 TIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDME 350

Query: 258 ---------------------EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
                                + + LF EM   N  P EIT++  +  C  +G L +G W
Sbjct: 351 EKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIW 410

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           +H YI +     ++A+  +LVDMY KC  I  A ++F G+++++ + + A+I   A    
Sbjct: 411 IHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGD 470

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVDVILKT 415
              A   F  M  + + P+E+T +GLLS C   G ++ G+   + ++ +  L   +   +
Sbjct: 471 ASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYS 530

Query: 416 ALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMHG---CGEEALIFFVDMERS 471
            +VD+  + G +  A RL  S  +  D  +W A++ G  MHG    GE+A    ++++ S
Sbjct: 531 IMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPS 590



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 139/282 (49%), Gaps = 10/282 (3%)

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM--YGKCREIRSARTLFDG 335
           +LSL+ +C  +  L   K + A ++ NG       ++ L+      + R +  +  +  G
Sbjct: 56  LLSLLEKCKLLLHL---KQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKG 112

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHM---KVSKVRPNEVTMVGLLSLCTEAGAL 392
           +++ ++  WN  I  ++++    ++F L+  M      + RP+  T   L  +C +    
Sbjct: 113 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 172

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
            +G  +  ++ K  LE+   +  A + M+A CGD+  A ++F E+  RD+  WN ++ GY
Sbjct: 173 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 232

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
              G  E+A+  +  ME  GVKP+ +T IGL+++CS  G +  GK  ++  V   GL   
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYE-YVKENGLRMT 291

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           I     ++D+  + G + EA  +  ++  R  ++ W  +++ 
Sbjct: 292 IPLVNALMDMFSKCGDIHEARRIFDNLEKR-TIVSWTTMISG 332


>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 198/555 (35%), Positives = 316/555 (56%), Gaps = 40/555 (7%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +L+AC Q       K+IH   +KN  + D+ V + L ++Y  C  +V AR LFDE+PN  
Sbjct: 14  LLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPNPS 73

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           V+ W+ +IR Y   G  + A+++   M  + +RP++     ++   + +  ++ G  IH+
Sbjct: 74  VILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEIHS 133

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
                  +    V + TAL+D Y+KCG L  A++LF+ ++   VV+W  MI+G       
Sbjct: 134 HAKMFGLESD--VFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
           ++ V+L  +M EE + P+  TI+ ++                                  
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVL---------------------------------- 217

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
                 C+ +  AR +FD M  ++ + W+A+I  Y  + C+ +A ++F  M++S + P+ 
Sbjct: 218 ----PTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGIDPDL 273

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
            TM+G+L  C+   AL+ G   H Y+  +G   D ++  AL+DMY+KCG ++ A  +F+ 
Sbjct: 274 TTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNR 333

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
               DI  WNAM+ GYG+HG G EAL  F D+   G+KP+ ITFI LL++CSH+GLV EG
Sbjct: 334 MDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEG 393

Query: 497 KSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
           +  FD M     +VP++EH  CMVD+LGRAGL+DEAH  I++MP  P++ +W ALL+A +
Sbjct: 394 RLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACR 453

Query: 557 LHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGF 616
           +HKN  +GE  + +I  + P++ G  VL+SNIY+ A RW+D A +R   K+  +KK PG 
Sbjct: 454 IHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGC 513

Query: 617 SSVEVNGLVHKFIRG 631
           S +E+NG+VH F+ G
Sbjct: 514 SWIEINGIVHAFVGG 528



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 208/430 (48%), Gaps = 43/430 (10%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  I NP +  +N ++ +Y  N     A+++Y  M   G   + +T P +LKAC+ +L  
Sbjct: 66  FDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAI 125

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
             G EIH  A   GL+ D +V  AL+  Y++CG LV A+ LF  M +RDVV+W+ MI G 
Sbjct: 126 EDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGC 185

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
              GL ++A++++ +M+   I P+                                    
Sbjct: 186 SLYGLCDDAVQLIMQMQEEGICPN------------------------------------ 209

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
               ++ ++ +   C  L YA+++F+ +   + VSW+ MI GY+  + + E + +F  M 
Sbjct: 210 ----SSTIVGVLPTCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQ 265

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
              + P   T+L ++  C  +  LQ G   H Y++  GF     + NAL+DMY KC +I 
Sbjct: 266 LSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKIS 325

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            AR +F+ M   D++ WNA+I  Y       +A  LF  +    ++P+++T + LLS C+
Sbjct: 326 FAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCS 385

Query: 388 EAGALEMGK-WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMW 445
            +G +  G+ W         +   +     +VD+  + G ++ A+       +  D+ +W
Sbjct: 386 HSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIW 445

Query: 446 NAMMAGYGMH 455
           +A+++   +H
Sbjct: 446 SALLSACRIH 455



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 122/225 (54%), Gaps = 3/225 (1%)

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           L L+  C     L   K +H + L+N      ++ + L  +Y  C ++  AR LFD + +
Sbjct: 12  LHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEIPN 71

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
             V++WN +I AYA     D A +L+  M    VRPN+ T   +L  C+   A+E G  +
Sbjct: 72  PSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGVEI 131

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H++ +  GLE DV + TALVD YAKCG +  A RLFS   +RD+  WNAM+AG  ++G  
Sbjct: 132 HSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYGLC 191

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
           ++A+   + M+  G+ PN  T +G+L  C     +   + +FD M
Sbjct: 192 DDAVQLIMQMQEEGICPNSSTIVGVLPTCQ---CLLYARKIFDVM 233


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/608 (34%), Positives = 335/608 (55%), Gaps = 17/608 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +  LV ++  + +    L     MR++G   D  T  T L +C        G  IH 
Sbjct: 23  LYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQ 82

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMIRGYHRGGLPE 154
             + + L+ D  VSNAL+ MY +CGSL  A+ +F +M   R+V+SWS M   +   G   
Sbjct: 83  MVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVW 142

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           EAL   R M  + I+ ++ AM++++S  +  A V  G+ IH+C+  +  + +L   +A A
Sbjct: 143 EALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESEL--LVANA 200

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQ--NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           ++ MY +CG +  A+++F+ +++    VVSW +M+S Y+  +   + ++L+  M    + 
Sbjct: 201 VMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRM---QLR 257

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P ++T +SL+  C     + LG+ LH  I+ +  E ++ + NALV MY KC     AR +
Sbjct: 258 PDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAV 317

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM-------KVSKVRPNEVTMVGLLSL 385
           FD M+ + ++ W  +ISAY +   + +A  LF  M          +V+P+ +  V +L+ 
Sbjct: 318 FDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNA 377

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICM 444
           C +  ALE GK +       GL  D  + TA+V++Y KCG++  A R+F     R D+ +
Sbjct: 378 CADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQL 437

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           WNAM+A Y   G   EAL  F  ME  GV+P+  +F+ +L ACSH GL  +GKS F  M 
Sbjct: 438 WNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMT 497

Query: 505 HGLGLVPK-IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
                V + I+H+GC+ DLLGR G L EA E ++ +P++P+ + W +LLAA + H++   
Sbjct: 498 TEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKR 557

Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
            +  A ++L +EP+     V +SNIYA   +W+ VA VR+ M E  VKKE G S++E+  
Sbjct: 558 AKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGK 617

Query: 624 LVHKFIRG 631
            +H F  G
Sbjct: 618 YMHDFATG 625



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/451 (30%), Positives = 242/451 (53%), Gaps = 20/451 (4%)

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           MY+ C S   A+  FD +  R++ SW+ ++  +   G  +E L  +  MR   +RP  V 
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV--AIATALIDMYSKCGNLAYAKQLF 232
            I+ +    D   +  G  IH  VV    D +L +   ++ AL++MY KCG+L++AK++F
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVV----DSRLEIDPKVSNALLNMYKKCGSLSHAKRVF 116

Query: 233 NRLNQN-SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL 291
            ++ +  +V+SW++M   +     + E +R F  M+   +  ++  +++++  C     +
Sbjct: 117 AKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALV 176

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS--KDVMIWNAVIS 349
           Q G+ +H+ I  +GFE  L +ANA++ MYG+C  +  AR +FD M    +DV+ WN ++S
Sbjct: 177 QDGRMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLS 236

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
            Y        A +L+  M   ++RP++VT V LLS C+ A  + +G+ LH  I    LE 
Sbjct: 237 TYVHNDRGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEK 293

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF---V 466
           +VI+  ALV MYAKCG    A  +F +   R I  W  +++ Y       EA   F   +
Sbjct: 294 NVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQML 353

Query: 467 DMERSG----VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDL 522
           ++E++G    VKP+ + F+ +LNAC+    + +GK V ++     GL         +V+L
Sbjct: 354 ELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAA-SCGLSSDKAVGTAVVNL 412

Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            G+ G ++EA  +  ++  RP++ +W A++A
Sbjct: 413 YGKCGEIEEARRIFDAVCSRPDVQLWNAMIA 443



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 177/340 (52%), Gaps = 8/340 (2%)

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+ C +   AK  F+ L Q ++ SWT +++ +    +  E +R    M ++ V P  +T
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM- 336
            ++ +  CG    L+ G  +H  ++ +  E    ++NAL++MY KC  +  A+ +F  M 
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           ++++V+ W+ +  A+A    + +A   F  M +  ++  +  MV +LS C+    ++ G+
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 180

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS--EAIYRDICMWNAMMAGYGM 454
            +H+ I   G E ++++  A++ MY +CG V  A ++F   +   RD+  WN M++ Y  
Sbjct: 181 MIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVH 240

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           +  G++A+  +   +R  ++P+ +T++ LL+ACS A  V  G+ V  K +    L   + 
Sbjct: 241 NDRGKDAIQLY---QRMQLRPDKVTYVSLLSACSSAEDVGLGR-VLHKQIVNDELEKNVI 296

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
               +V +  + G   EA  +   M  R ++I W  +++A
Sbjct: 297 VGNALVSMYAKCGSHTEARAVFDKMEQR-SIISWTTIISA 335



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 152/321 (47%), Gaps = 19/321 (5%)

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
           MY  C     A+  FD ++ +++  W  +++A+A +    +       M+   VRP+ VT
Sbjct: 1   MYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVT 60

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-A 437
            +  L  C +  +L  G  +H  +    LE+D  +  AL++MY KCG ++ A R+F++  
Sbjct: 61  FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 120

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
             R++  W+ M   + +HG   EAL  F  M   G+K      + +L+ACS   LV +G 
Sbjct: 121 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDG- 179

Query: 498 SVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM--PLRPNMIVWGAL 551
               +M+H      G   ++     ++ + GR G ++EA ++  +M   LR +++ W  +
Sbjct: 180 ----RMIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALR-DVVSWNIM 234

Query: 552 LAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVK 611
           L ++ +H +     I   Q +++ P    Y  L+S   +  +      G+ RV+ +  V 
Sbjct: 235 L-STYVHNDRGKDAIQLYQRMQLRPDKVTYVSLLSACSSAED-----VGLGRVLHKQIVN 288

Query: 612 KEPGFSSVEVNGLVHKFIRGG 632
            E   + +  N LV  + + G
Sbjct: 289 DELEKNVIVGNALVSMYAKCG 309


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 212/654 (32%), Positives = 351/654 (53%), Gaps = 66/654 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN-FTIPTILKACAQVLMTHLGKEIHGFA 97
           +N+L++ Y ++ +   +L  +  M ++G    N FT+   +K+C  +    L  ++    
Sbjct: 105 WNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMV 164

Query: 98  IKNGLDGDAYVSNALIQMYSECGSL-VSARY----------------------------- 127
            K     D+ V+ AL+ M+  CG++ +++R                              
Sbjct: 165 QKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHAL 224

Query: 128 -LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            LFD MP RDVVSW+ M+    + G   EAL+++ +M+   +R       S ++  A ++
Sbjct: 225 ELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLS 284

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
            +  GK +HA V+RN     +   +A+AL+++Y+K G    AK +FN L+  + V+WTV+
Sbjct: 285 SLRWGKQLHAQVIRNLP--HIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVL 342

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           ISG+++     E V LF +M  E +   +  + +LI  C     L LG+ LH+  L++G 
Sbjct: 343 ISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ 402

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF-- 364
             ++ ++N+L+ MY KC  ++SA  +F  M  KD++ W ++I+AY+Q   + KA E F  
Sbjct: 403 IQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDG 462

Query: 365 ------------------------------IHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
                                         + +    VRP+ VT V L   C + GA ++
Sbjct: 463 MSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKL 522

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G  +     K GL +D  +  A++ MY+KCG +  A ++F     +DI  WNAM+ GY  
Sbjct: 523 GDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQ 582

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           HG G++A+  F D+ + G KP+ I+++ +L+ CSH+GLV EGK  FD M     + P +E
Sbjct: 583 HGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLE 642

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           H+ CMVDLLGRAG L EA ++I  MP++P   VWGALL+A K+H N  + E+AA  + E+
Sbjct: 643 HFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFEL 702

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           +  + G  +LM+ IYA A + +D A +R++M++  +KK PG+S +EV+  VH F
Sbjct: 703 DSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVF 756



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 130/577 (22%), Positives = 236/577 (40%), Gaps = 100/577 (17%)

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYL--------- 128
           L++C         + +HG  +  GL    ++ N L+  Y  CG+L  AR L         
Sbjct: 11  LRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPN 70

Query: 129 -----------------------FDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-R 164
                                  F  MP RDV SW+T++ GY +      +LE    M R
Sbjct: 71  VITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHR 130

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
             D  P+   +   +     +    L   + A V +   D +    +A AL+DM+ +CG 
Sbjct: 131 SGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKF--DSQDDSEVAAALVDMFVRCGA 188

Query: 225 LAYAKQLFNRLNQNS-------------------------------VVSWTVMISGYIRC 253
           +  A +LF R+ + +                               VVSW +M+S   + 
Sbjct: 189 VDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQS 248

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
             + E + +  +M  + V     T  S +  C  +  L+ GK LHA ++RN       +A
Sbjct: 249 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA 308

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           +ALV++Y K    + A+ +F+ +  ++ + W  +IS + Q  C  ++ ELF  M+   + 
Sbjct: 309 SALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMT 368

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC--------- 424
            ++  +  L+S C     L +G+ LH+   K G    V++  +L+ MYAKC         
Sbjct: 369 LDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAI 428

Query: 425 ----------------------GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
                                 G+V  A   F     +++  WNAM+  Y  HG  E+ L
Sbjct: 429 FRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGL 488

Query: 463 -IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVD 521
            ++ V +    V+P+ +T++ L   C+  G    G  +  + V  +GL+        ++ 
Sbjct: 489 RMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVK-VGLIIDTSVANAVIT 547

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +  + G + EA ++   + ++ +++ W A++     H
Sbjct: 548 MYSKCGRILEARKVFDFLNVK-DIVSWNAMITGYSQH 583



 Score = 39.3 bits (90), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 12/176 (6%)

Query: 20  IIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILK 79
           I++    F + N+   +  +N+++T Y ++     A+ I+  + K G++ D  +   +L 
Sbjct: 555 ILEARKVFDFLNV-KDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 613

Query: 80  ACAQVLMTHLGKEI-----HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN 134
            C+   +   GK           I  GL+      + ++ +    G L  A+ L D+MP 
Sbjct: 614 GCSHSGLVQEGKFYFDMMKRAHNISPGLEH----FSCMVDLLGRAGHLTEAKDLIDDMPM 669

Query: 135 RDVVS-WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           +     W  ++      G  E A    + +  +D  P   + + M  ++AD    D
Sbjct: 670 KPTAEVWGALLSACKIHGNNELAELAAKHVFELD-SPDSGSYMLMAKIYADAGKSD 724


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  374 bits (960), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 212/654 (32%), Positives = 351/654 (53%), Gaps = 66/654 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN-FTIPTILKACAQVLMTHLGKEIHGFA 97
           +N+L++ Y ++ +   +L  +  M ++G    N FT+   +K+C  +    L  ++    
Sbjct: 125 WNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMKSCGALGWHSLALQLLAMV 184

Query: 98  IKNGLDGDAYVSNALIQMYSECGSL-VSARY----------------------------- 127
            K     D+ V+ AL+ M+  CG++ +++R                              
Sbjct: 185 QKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHAL 244

Query: 128 -LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            LFD MP RDVVSW+ M+    + G   EAL+++ +M+   +R       S ++  A ++
Sbjct: 245 ELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLS 304

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
            +  GK +HA V+RN     +   +A+AL+++Y+K G    AK +FN L+  + V+WTV+
Sbjct: 305 SLRWGKQLHAQVIRNLP--HIDPYVASALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVL 362

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           ISG+++     E V LF +M  E +   +  + +LI  C     L LG+ LH+  L++G 
Sbjct: 363 ISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQ 422

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF-- 364
             ++ ++N+L+ MY KC  ++SA  +F  M  KD++ W ++I+AY+Q   + KA E F  
Sbjct: 423 IQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDG 482

Query: 365 ------------------------------IHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
                                         + +    VRP+ VT V L   C + GA ++
Sbjct: 483 MSEKNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKL 542

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G  +     K GL +D  +  A++ MY+KCG +  A ++F     +DI  WNAM+ GY  
Sbjct: 543 GDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQ 602

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           HG G++A+  F D+ + G KP+ I+++ +L+ CSH+GLV EGK  FD M     + P +E
Sbjct: 603 HGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLE 662

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           H+ CMVDLLGRAG L EA ++I  MP++P   VWGALL+A K+H N  + E+AA  + E+
Sbjct: 663 HFSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFEL 722

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           +  + G  +LM+ IYA A + +D A +R++M++  +KK PG+S +EV+  VH F
Sbjct: 723 DSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVF 776



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 130/577 (22%), Positives = 236/577 (40%), Gaps = 100/577 (17%)

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYL--------- 128
           L++C         + +HG  +  GL    ++ N L+  Y  CG+L  AR L         
Sbjct: 31  LRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPN 90

Query: 129 -----------------------FDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-R 164
                                  F  MP RDV SW+T++ GY +      +LE    M R
Sbjct: 91  VITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHR 150

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
             D  P+   +   +     +    L   + A V +   D +    +A AL+DM+ +CG 
Sbjct: 151 SGDSWPNAFTLACAMKSCGALGWHSLALQLLAMVQKF--DSQDDSEVAAALVDMFVRCGA 208

Query: 225 LAYAKQLFNRLNQNS-------------------------------VVSWTVMISGYIRC 253
           +  A +LF R+ + +                               VVSW +M+S   + 
Sbjct: 209 VDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQS 268

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
             + E + +  +M  + V     T  S +  C  +  L+ GK LHA ++RN       +A
Sbjct: 269 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA 328

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           +ALV++Y K    + A+ +F+ +  ++ + W  +IS + Q  C  ++ ELF  M+   + 
Sbjct: 329 SALVELYAKSGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMT 388

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC--------- 424
            ++  +  L+S C     L +G+ LH+   K G    V++  +L+ MYAKC         
Sbjct: 389 LDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAI 448

Query: 425 ----------------------GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
                                 G+V  A   F     +++  WNAM+  Y  HG  E+ L
Sbjct: 449 FRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGL 508

Query: 463 -IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVD 521
            ++ V +    V+P+ +T++ L   C+  G    G  +  + V  +GL+        ++ 
Sbjct: 509 RMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVK-VGLIIDTSVANAVIT 567

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +  + G + EA ++   + ++ +++ W A++     H
Sbjct: 568 MYSKCGRILEARKVFDFLNVK-DIVSWNAMITGYSQH 603



 Score = 39.3 bits (90), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 35/176 (19%), Positives = 72/176 (40%), Gaps = 12/176 (6%)

Query: 20  IIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILK 79
           I++    F + N+   +  +N+++T Y ++     A+ I+  + K G++ D  +   +L 
Sbjct: 575 ILEARKVFDFLNV-KDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLS 633

Query: 80  ACAQVLMTHLGKEI-----HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN 134
            C+   +   GK           I  GL+      + ++ +    G L  A+ L D+MP 
Sbjct: 634 GCSHSGLVQEGKFYFDMMKRAHNISPGLEH----FSCMVDLLGRAGHLTEAKDLIDDMPM 689

Query: 135 RDVVS-WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           +     W  ++      G  E A    + +  +D  P   + + M  ++AD    D
Sbjct: 690 KPTAEVWGALLSACKIHGNNELAELAAKHVFELD-SPDSGSYMLMAKIYADAGKSD 744


>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 194/569 (34%), Positives = 327/569 (57%), Gaps = 12/569 (2%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           T+ ++L  C++      G  +H   +K G   D ++SN ++ MY++CG    AR +FDEM
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
             +++VSWS MI GY + G P+ A+++  +M  +   P+E    S++S  A ++ V LG+
Sbjct: 65  FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLV---PNEYVFASVISACASLSAVTLGQ 121

Query: 193 AIHACVVRNCKDEKLGVA-IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
            IH+   R+ K     ++ ++ +LI MY KC   + A  +F    + + VS+  +I+G++
Sbjct: 122 KIHS---RSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFV 178

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
              ++  G+  F  M ++ + P     + ++  C     L+ G  LH   ++   + +  
Sbjct: 179 ENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPF 238

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID--KAFELFIHM-K 368
           + N ++ MY +   I+ A   F  ++ KDV+ WN +I+A +  HC D  K   +F HM +
Sbjct: 239 IGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACS--HCDDHAKGLRVFKHMTE 296

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
            + VRP++ T    L+ C    ++  GK +H ++ +  L  D+ +  ALV+MYAKCG + 
Sbjct: 297 ETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIG 356

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            AY +FS+ ++ ++  WN ++AG+G HG GE A+  F  M  SG++P+ +TFIGLL AC+
Sbjct: 357 YAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACN 416

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           HAGLV +G+  F+ M    G+ P IEH+ C++D+LGRAG L+EA E ++  P   + +V 
Sbjct: 417 HAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVL 476

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
            +LL+AS+LH +  +GE  A  +L+++P      VL+SN+YA    W+ VA  R+ +K  
Sbjct: 477 VSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGS 536

Query: 609 RVKKEPGFSSVEVNGLVHKFIRGGMVNWK 637
            +KKEPG S +EVNG V KF  G   + +
Sbjct: 537 GLKKEPGHSLIEVNGSVEKFTIGDFTHLR 565



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 217/429 (50%), Gaps = 18/429 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  ++++++ Y +  +P  A+++Y+ M    +E   +   +++ ACA +    LG++IH 
Sbjct: 69  LVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNE---YVFASVISACASLSAVTLGQKIHS 125

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            ++K G +  ++VSN+LI MY +C     A  +F   P  + VS++ +I G+      E 
Sbjct: 126 RSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLER 185

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            LE  + MR   + P   A + ++ +     ++  G  +H   V+   D      I   +
Sbjct: 186 GLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDST--PFIGNVI 243

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPS 274
           I MYS+   +  A++ F  + +  V+SW  +I+    C++  +G+R+F  M EE NV P 
Sbjct: 244 ITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPD 303

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           + T  S +  C  +  +  GK +HA+++R      L + NALV+MY KC  I  A  +F 
Sbjct: 304 DFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFS 363

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M   +++ WN +I+ +      ++A ELF  M  S +RP+ VT +GLL+ C  AG ++ 
Sbjct: 364 KMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDK 423

Query: 395 GK-WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN------A 447
           G+ + ++  E  G+  D+   + L+DM  + G +N A     E   R    WN      +
Sbjct: 424 GQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEA-----EEYMRKFPFWNDPVVLVS 478

Query: 448 MMAGYGMHG 456
           +++   +HG
Sbjct: 479 LLSASRLHG 487



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 146/305 (47%), Gaps = 5/305 (1%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +TN   P    YN+L+T +++N +    L  +  MR+ G   D F    +L  C      
Sbjct: 159 FTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENL 218

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
             G E+H   +K  LD   ++ N +I MYSE   +  A   F  +  +DV+SW+T+I   
Sbjct: 219 KRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAAC 278

Query: 148 HRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
                  + L V + M    ++RP +    S ++  A +A +  GK IHA ++R    + 
Sbjct: 279 SHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQD 338

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
           LGV    AL++MY+KCG + YA  +F+++  +++VSW  +I+G+         V LF +M
Sbjct: 339 LGV--GNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQM 396

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGK-WLHAYILRNGFEFSLAMANALVDMYGKCRE 325
               + P  +T + L+  C   G +  G+ + ++     G    +   + L+DM G+   
Sbjct: 397 NASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGR 456

Query: 326 IRSAR 330
           +  A 
Sbjct: 457 LNEAE 461


>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 587

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 194/569 (34%), Positives = 327/569 (57%), Gaps = 12/569 (2%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           T+ ++L  C++      G  +H   +K G   D ++SN ++ MY++CG    AR +FDEM
Sbjct: 5   TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
             +++VSWS MI GY + G P+ A+++  +M  +   P+E    S++S  A ++ V LG+
Sbjct: 65  FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLV---PNEYVFASVISACASLSAVTLGQ 121

Query: 193 AIHACVVRNCKDEKLGVA-IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
            IH+   R+ K     ++ ++ +LI MY KC   + A  +F    + + VS+  +I+G++
Sbjct: 122 KIHS---RSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFV 178

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
              ++  G+  F  M ++ + P     + ++  C     L+ G  LH   ++   + +  
Sbjct: 179 ENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPF 238

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID--KAFELFIHM-K 368
           + N ++ MY +   I+ A   F  ++ KDV+ WN +I+A +  HC D  K   +F HM +
Sbjct: 239 IGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACS--HCDDHAKGLRVFKHMTE 296

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
            + VRP++ T    L+ C    ++  GK +H ++ +  L  D+ +  ALV+MYAKCG + 
Sbjct: 297 ETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIG 356

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            AY +FS+ ++ ++  WN ++AG+G HG GE A+  F  M  SG++P+ +TFIGLL AC+
Sbjct: 357 YAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACN 416

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           HAGLV +G+  F+ M    G+ P IEH+ C++D+LGRAG L+EA E ++  P   + +V 
Sbjct: 417 HAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVL 476

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
            +LL+AS+LH +  +GE  A  +L+++P      VL+SN+YA    W+ VA  R+ +K  
Sbjct: 477 VSLLSASRLHGDVVIGERLAKWLLKLQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGS 536

Query: 609 RVKKEPGFSSVEVNGLVHKFIRGGMVNWK 637
            +KKEPG S +EVNG V KF  G   + +
Sbjct: 537 GLKKEPGHSLIEVNGSVEKFTIGDFTHLR 565



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 217/429 (50%), Gaps = 18/429 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  ++++++ Y +  +P  A+++Y+ M    +E   +   +++ ACA +    LG++IH 
Sbjct: 69  LVSWSAMISGYDQAGEPQMAIDLYSQMFLVPNE---YVFASVISACASLSAVTLGQKIHS 125

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            ++K G +  ++VSN+LI MY +C     A  +F   P  + VS++ +I G+      E 
Sbjct: 126 RSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLER 185

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            LE  + MR   + P   A + ++ +     ++  G  +H   V+   D      I   +
Sbjct: 186 GLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDST--PFIGNVI 243

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPS 274
           I MYS+   +  A++ F  + +  V+SW  +I+    C++  +G+R+F  M EE NV P 
Sbjct: 244 ITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPD 303

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           + T  S +  C  +  +  GK +HA+++R      L + NALV+MY KC  I  A  +F 
Sbjct: 304 DFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFS 363

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M   +++ WN +I+ +      ++A ELF  M  S +RP+ VT +GLL+ C  AG ++ 
Sbjct: 364 KMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDK 423

Query: 395 GK-WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN------A 447
           G+ + ++  E  G+  D+   + L+DM  + G +N A     E   R    WN      +
Sbjct: 424 GQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRLNEA-----EEYMRKFPFWNDPVVLVS 478

Query: 448 MMAGYGMHG 456
           +++   +HG
Sbjct: 479 LLSASRLHG 487



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 146/305 (47%), Gaps = 5/305 (1%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +TN   P    YN+L+T +++N +    L  +  MR+ G   D F    +L  C      
Sbjct: 159 FTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENL 218

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
             G E+H   +K  LD   ++ N +I MYSE   +  A   F  +  +DV+SW+T+I   
Sbjct: 219 KRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAAC 278

Query: 148 HRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
                  + L V + M    ++RP +    S ++  A +A +  GK IHA ++R    + 
Sbjct: 279 SHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQD 338

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
           LGV    AL++MY+KCG + YA  +F+++  +++VSW  +I+G+         V LF +M
Sbjct: 339 LGV--GNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQM 396

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGK-WLHAYILRNGFEFSLAMANALVDMYGKCRE 325
               + P  +T + L+  C   G +  G+ + ++     G    +   + L+DM G+   
Sbjct: 397 NASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGR 456

Query: 326 IRSAR 330
           +  A 
Sbjct: 457 LNEAE 461


>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like [Vitis vinifera]
          Length = 662

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 210/592 (35%), Positives = 333/592 (56%), Gaps = 43/592 (7%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGL--DGDAYVSNALIQMYSECGSLVSARYLFDEMPN 134
           +LK C    M HL K+I    ++ G    GD      +       G+L  A  +F+ +  
Sbjct: 38  LLKNCKS--MQHL-KQIQTQILRTGFHQSGDTLNKFMVCCTDPSIGNLHYAERIFNYIDI 94

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
             +  ++ +I+ + + G   +A+ + R++R   + P       +      + +V  G+ +
Sbjct: 95  PGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGEVREGEKV 154

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
           +  VV++  +      +  +L+DMY++ G +   +Q+F  + Q  VVSW V+ISGY++C 
Sbjct: 155 YGFVVKSGLE--FDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCR 212

Query: 255 EINEGVRLFAEMIEENVF-PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
              + V +F  M +++   P+E T++S +  C  +  L+LGK +H Y+ R    F++ + 
Sbjct: 213 RYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYV-REQLGFTIKIG 271

Query: 314 NALVDMYGKC------REI-------------------------RSARTLFDGMKSKDVM 342
           NALVDMY KC      REI                           AR LF+    +DV+
Sbjct: 272 NALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVV 331

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
           +W A+I+ Y Q +  D A  LF  M++ +V P+  T+V LL+ C + G LE GKW+H YI
Sbjct: 332 LWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYI 391

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
           ++  + +D ++ TAL++MYAKCG +  +  +F+    +D   W +++ G  M+G   +AL
Sbjct: 392 DENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNGKTSKAL 451

Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDL 522
             F +M ++GVKP+ ITFIG+L+ACSH GLV EG+  F  M     + PK+EHYGC++DL
Sbjct: 452 ELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDL 511

Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIV---WGALLAASKLHKNPSMGEIAATQILEIEPQNY 579
           LGRAG LDEA E+I+  P   N ++   +GALL+A + H N  MGE  A +++ IE  + 
Sbjct: 512 LGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDS 571

Query: 580 GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             + L++NIYA A+RW DV  VRR MK++ VKK PG SSVEVNG+VH+F+ G
Sbjct: 572 SVHTLLANIYASADRWEDVTKVRRKMKDLGVKKVPGCSSVEVNGIVHEFLVG 623



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/469 (31%), Positives = 249/469 (53%), Gaps = 45/469 (9%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           F+Y +I   L  YN ++ ++ KN     A+ ++  +R+ G   DNFT P + KA   +  
Sbjct: 89  FNYIDIPG-LFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKAIGCLGE 147

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
              G++++GF +K+GL+ D YV N+L+ MY+E G + + R +F+EMP RDVVSW+ +I G
Sbjct: 148 VREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVVSWNVLISG 207

Query: 147 YHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           Y +    E+A++V R M+    +RP+E  ++S +S    +  ++LGK IH  V      E
Sbjct: 208 YVKCRRYEDAVDVFRRMQQQSSLRPNEATVVSTLSACIALKMLELGKEIHRYV-----RE 262

Query: 206 KLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG---- 259
           +LG  + I  AL+DMY KCG+L+ A+++FN +   +V+ WT M+SGY+ C +++E     
Sbjct: 263 QLGFTIKIGNALVDMYCKCGHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELF 322

Query: 260 ---------------------------VRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
                                      V LF EM  + V P   T+++L+  C  +G L+
Sbjct: 323 ERSPVRDVVLWTAMINGYVQFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLE 382

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
            GKW+H YI  N       +  AL++MY KC  I  +  +F+G+K KD   W ++I   A
Sbjct: 383 QGKWIHGYIDENKIMIDAVVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLA 442

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDV 411
                 KA ELF  M  + V+P+++T +G+LS C+  G +E G K   +      +E  +
Sbjct: 443 MNGKTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKL 502

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRD----ICMWNAMMAGYGMHG 456
                L+D+  + G ++ A  L  ++   +    + ++ A+++    HG
Sbjct: 503 EHYGCLIDLLGRAGQLDEAEELIEKSPNVNNEVIVPLYGALLSACRTHG 551


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 199/593 (33%), Positives = 324/593 (54%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+++Y+KN++   A+ ++  M  +G +   F    ++ AC        G+++H   +
Sbjct: 77  WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVV 136

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G + D + +NAL+ MY + G +  A  +F++MP+ DVVSW+ +I G    G    A+E
Sbjct: 137 RMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIE 196

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++ +M+   + P+   + S++   A     DLG+ IH  +++   D      I   L+DM
Sbjct: 197 LLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSD--DYIGVGLVDM 254

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K   L  A ++F+ ++   ++ W  +ISG       +E   +F  + +E +  +  T+
Sbjct: 255 YAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTL 314

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            +++     +      + +HA   + GF F   + N L+D Y KC  +  A  +F+   S
Sbjct: 315 AAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSS 374

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D++   ++I+A +Q    + A +LF+ M    + P+   +  LL+ C    A E GK +
Sbjct: 375 GDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 434

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ K+    D     ALV  YAKCG +  A   FS    R +  W+AM+ G   HG G
Sbjct: 435 HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHG 494

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           + AL  F  M   G+ PN IT   +L AC+HAGLV E K  F+ M    G+    EHY C
Sbjct: 495 KRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSC 554

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           M+DLLGRAG LD+A E++ SMP + N  VWGALL AS++HK+P +G++AA ++  +EP+ 
Sbjct: 555 MIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEK 614

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            G +VL++N YA +  WN+VA VR++MK+  +KKEP  S VEV   VH FI G
Sbjct: 615 SGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVG 667



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 238/498 (47%), Gaps = 8/498 (1%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           MR  G   + F +P +LK    V    LG ++H  A+  G   D +V+NAL+ MY   G 
Sbjct: 1   MRAEGVCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGF 57

Query: 122 LVSARYLFDEM-PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
           +  AR +FDE    R+ VSW+ ++  Y +     +A++V  EM +  I+P+E     +V+
Sbjct: 58  MDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVN 117

Query: 181 LFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
                 ++D G+ +HA VVR   ++   V  A AL+DMY K G +  A  +F ++  + V
Sbjct: 118 ACTGSRNIDAGRQVHAMVVRMGYEKD--VFTANALVDMYVKMGRVDIASVIFEKMPDSDV 175

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           VSW  +ISG +     +  + L  +M    + P+   + S++  C   G   LG+ +H +
Sbjct: 176 VSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGF 235

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           +++   +    +   LVDMY K   +  A  +FD M  +D+++WNA+IS  +     D+A
Sbjct: 236 MIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEA 295

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
           F +F  ++   +  N  T+  +L       A    + +H   EK G   D  +   L+D 
Sbjct: 296 FSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDS 355

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           Y KC  ++ A R+F E    DI    +M+        GE A+  F++M R G++P+    
Sbjct: 356 YWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVL 415

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
             LLNAC+      +GK V   ++    +         +V    + G +++A     S+P
Sbjct: 416 SSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLP 474

Query: 541 LRPNMIVWGALLAASKLH 558
            R  ++ W A++     H
Sbjct: 475 ER-GVVSWSAMIGGLAQH 491



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 160/318 (50%), Gaps = 6/318 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+L++      +   A +I+  +RK G  V+  T+  +LK+ A +      +++H 
Sbjct: 276 LILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHA 335

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A K G   DA+V N LI  Y +C  L  A  +F+E  + D+++ ++MI    +    E 
Sbjct: 336 LAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEG 395

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA-TA 214
           A+++  EM    + P    + S+++  A ++  + GK +HA ++   K + +  A A  A
Sbjct: 396 AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI---KRQFMSDAFAGNA 452

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+  Y+KCG++  A+  F+ L +  VVSW+ MI G  +       + LF  M++E + P+
Sbjct: 453 LVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPN 512

Query: 275 EITILSLIIECGFVGGLQLGK-WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
            IT+ S++  C   G +   K + ++     G + +    + ++D+ G+  ++  A  L 
Sbjct: 513 HITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELV 572

Query: 334 DGMK-SKDVMIWNAVISA 350
           + M    +  +W A++ A
Sbjct: 573 NSMPFQANASVWGALLGA 590


>gi|242041975|ref|XP_002468382.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
 gi|241922236|gb|EER95380.1| hypothetical protein SORBIDRAFT_01g044940 [Sorghum bicolor]
          Length = 1026

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/590 (32%), Positives = 339/590 (57%), Gaps = 7/590 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++ Y+ NN+ + AL+ +  M+  G   D  T+  ++  C      H+ K IH +A+
Sbjct: 411 WNSMISGYLVNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAV 470

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +N  +    V NAL+ MY++CG + ++  LF +M  R ++SW+TMI G+   G  E +L 
Sbjct: 471 RNRFESYQSVMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLT 530

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN-CKDEKLGVAIATALID 217
           +  +M   ++    V +I ++S  +   D  +G+++H+  +++ C  +   V++  ALI 
Sbjct: 531 LFCQMFHEEVWFDLVTLIGLISSLSVSEDAIVGESVHSLAIKSGCISD---VSLTNALIT 587

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+ CG +   +QLFN     + +++  ++SGY + N   + + LF +M++ +  P+ +T
Sbjct: 588 MYANCGIVEAGQQLFNSFCSRNTITYNALMSGYRKNNVSEKILPLFTQMVKNDEKPNLVT 647

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           +L+L+  C     LQ GK +H+Y +RN       +  + + MY +   I   RT+F  + 
Sbjct: 648 LLNLLPVCQ--SQLQ-GKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCRTIFSLVS 704

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           ++++++WNA +SA  Q    D   + F HM    VRP+EVTM+ L+S C++ G  +    
Sbjct: 705 ARNLIVWNAFLSACVQCKQADMVVDYFKHMLFLNVRPDEVTMLALISACSQLGNADFAAC 764

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +   I ++G  +++++  AL+D +++CG ++ A  LF  ++ +D   W AM+  Y MHG 
Sbjct: 765 IMAVILQKGFSMNILVLNALIDTHSRCGSISFARELFDSSVEKDSVTWGAMINAYSMHGN 824

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           GE AL  F  M  SGV P+ ITF+ +L+ACSH GLV +G+++F  +    G+ P++EHY 
Sbjct: 825 GEAALDLFSMMIDSGVDPDDITFVSILSACSHNGLVEQGRTLFKSLQADHGITPRMEHYA 884

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLLGR G LDEA+++++SMP  P+  +  +LL A + H N  +GE     +++ E  
Sbjct: 885 CMVDLLGRTGHLDEAYDIVRSMPFTPSDNLLESLLGACRFHGNYKIGESVGKLLIKSEYG 944

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHK 627
                V++SNIYA A +W+D   +R  M+   ++K  G   +E  G+  K
Sbjct: 945 KSRSYVMLSNIYASAGKWSDCEQLRLDMEAKGLRKNVGVRKLESQGVPTK 994



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 156/533 (29%), Positives = 272/533 (51%), Gaps = 8/533 (1%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           ++  L  +N++V+ Y  N     A+     M++ G   +  T+  I+  C        G 
Sbjct: 201 VLRDLISWNAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDRVAGD 260

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            +H FA+K G   D  +++ALI MY+    L S+R +FD  P +D+VS+++MI  Y +  
Sbjct: 261 SLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQHS 320

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA-DVDLGKAIHACVVRNCKDEKLGVA 210
             +EA EV R M    + P+ + ++S++   +D+   ++ G+++H  +++    E+  V+
Sbjct: 321 NWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESVHGMIIKLGLAEQ--VS 378

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           + +AL+ MYSK G L  +  LF    + + + W  MISGY+  NE N  +  F +M    
Sbjct: 379 VVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYLVNNEWNMALDAFCKMQIAG 438

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           V P   T++++I  C +   L + K +HAY +RN FE   ++ NAL+ MY  C +I ++ 
Sbjct: 439 VAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQSVMNALLAMYADCGDISTSY 498

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
           TLF  M+ + ++ WN +IS +A+    + +  LF  M   +V  + VT++GL+S  + + 
Sbjct: 499 TLFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEEVWFDLVTLIGLISSLSVSE 558

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
              +G+ +H+   K G   DV L  AL+ MYA CG V    +LF+    R+   +NA+M+
Sbjct: 559 DAIVGESVHSLAIKSGCISDVSLTNALITMYANCGIVEAGQQLFNSFCSRNTITYNALMS 618

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           GY  +   E+ L  F  M ++  KPN +T + LL  C       +GK +    V     +
Sbjct: 619 GYRKNNVSEKILPLFTQMVKNDEKPNLVTLLNLLPVCQSQ---LQGKCIHSYAVRNFTRL 675

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
            +   +   + +  R   ++    +   +  R N+IVW A L+A    K   M
Sbjct: 676 -ETPLFTSAMGMYSRFNNIEYCRTIFSLVSAR-NLIVWNAFLSACVQCKQADM 726



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 260/504 (51%), Gaps = 11/504 (2%)

Query: 56  LNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQM 115
           L++Y  +   GS  DNFT P +++AC       LG+++H   ++ G   +  V  AL+ M
Sbjct: 126 LDLYRGLCGFGS--DNFTFPPVIRACTAASCLQLGRQVHCRVLRTGHGSNVGVQTALLDM 183

Query: 116 YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAM 175
           Y++ G +  +R +FD M  RD++SW+ M+ GY   G   EA+E ++EM+   + P+   +
Sbjct: 184 YAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTL 243

Query: 176 ISMVSLFADVADVDLGKAIHACVVR--NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFN 233
           + +V +     D   G ++HA  ++     DE L     +ALI MY+   +L+ ++ +F+
Sbjct: 244 VGIVGMCGSAGDRVAGDSLHAFALKGGTIDDESL----TSALISMYAAFDDLSSSRLVFD 299

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG-FVGGLQ 292
                 +VS+  MIS Y++ +   E   +F  M    V P+ IT++S++  C   + G+ 
Sbjct: 300 LQPVKDLVSFNSMISAYMQHSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGIN 359

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
            G+ +H  I++ G    +++ +ALV MY K  ++ S+  LF     K+ ++WN++IS Y 
Sbjct: 360 HGESVHGMIIKLGLAEQVSVVSALVSMYSKLGKLDSSSLLFCCFTEKNNILWNSMISGYL 419

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
             +  + A + F  M+++ V P+  T++ ++S C     L + K +H Y  +   E    
Sbjct: 420 VNNEWNMALDAFCKMQIAGVAPDATTVINVISGCRYTKDLHVAKSIHAYAVRNRFESYQS 479

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           +  AL+ MYA CGD++ +Y LF +   R +  WN M++G+   G  E +L  F  M    
Sbjct: 480 VMNALLAMYADCGDISTSYTLFQKMEVRMLISWNTMISGFAEIGDSETSLTLFCQMFHEE 539

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
           V  + +T IGL+++ S +     G+SV    +   G +  +     ++ +    G+++  
Sbjct: 540 VWFDLVTLIGLISSLSVSEDAIVGESVHSLAIKS-GCISDVSLTNALITMYANCGIVEAG 598

Query: 533 HEMIKSMPLRPNMIVWGALLAASK 556
            ++  S   R N I + AL++  +
Sbjct: 599 QQLFNSFCSR-NTITYNALMSGYR 621



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 198/426 (46%), Gaps = 38/426 (8%)

Query: 171 SEVAMISMVS-LFADVADVDLGKAIHACVVRNCKDEKLGVA-------IATALIDMYSKC 222
           SE+A + +++ L  D   +   + IHA         +L VA       + T L++ Y   
Sbjct: 36  SEIAHLKVLTVLLRDTCSLKCLREIHA---------RLAVAGAIQDRFVVTGLVERYVSF 86

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRC-------NEINEGVRLFAEMIEEN-VFPS 274
           G  A A  LF    +     +++ +   +RC        E+ +  R       +N  FP 
Sbjct: 87  GKPASAALLFAEAYRGRPAVYSLNL--VVRCFSDHGFHRELLDLYRGLCGFGSDNFTFPP 144

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
                 +I  C     LQLG+ +H  +LR G   ++ +  AL+DMY K  +I  +R +FD
Sbjct: 145 ------VIRACTAASCLQLGRQVHCRVLRTGHGSNVGVQTALLDMYAKAGQIDVSRRVFD 198

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M  +D++ WNA++S Y+   C  +A E    M+   + PN  T+VG++ +C  AG    
Sbjct: 199 CMVLRDLISWNAMVSGYSVNGCFREAVETLQEMQQCGMSPNASTLVGIVGMCGSAGDRVA 258

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G  LH +  K G   D  L +AL+ MYA   D++ +  +F     +D+  +N+M++ Y  
Sbjct: 259 GDSLHAFALKGGTIDDESLTSALISMYAAFDDLSSSRLVFDLQPVKDLVSFNSMISAYMQ 318

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL-VTEGKSVFDKMVHGLGLVPKI 513
           H   +EA   F  M  +GV PN IT + +L +CS     +  G+SV   M+  LGL  ++
Sbjct: 319 HSNWKEAFEVFRLMHCAGVGPNLITLVSVLPSCSDLLFGINHGESV-HGMIIKLGLAEQV 377

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK--NPSMGEIAATQI 571
                +V +  + G LD +  +      + N I+W ++++   ++   N ++      QI
Sbjct: 378 SVVSALVSMYSKLGKLDSSSLLFCCFTEKNN-ILWNSMISGYLVNNEWNMALDAFCKMQI 436

Query: 572 LEIEPQ 577
             + P 
Sbjct: 437 AGVAPD 442


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/544 (35%), Positives = 317/544 (58%), Gaps = 4/544 (0%)

Query: 90  GKEIHGFAIKNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           G+++H   I    L+ + Y++  L   Y+ CG +  A  +FD +  ++   W+ MIRGY 
Sbjct: 78  GQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGYA 137

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
             GLP ++L + REM     R        ++    D+  V++G+ +H+ VV  C  E   
Sbjct: 138 SNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVV-CGLES-D 195

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           + +  +L+ MY+K G++  A+ +F+R+ +  + SW  MISGY +  +      +F  M +
Sbjct: 196 IYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGK 255

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF-EFSLAMANALVDMYGKCREIR 327
             +F    T+L L+  C  +  ++ GK +H Y +RN    ++    N+L++MY  C  + 
Sbjct: 256 AGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMV 315

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            AR LF+ ++ KD + WN++I  YA+     ++  LF  M +    P++VT + +L  C 
Sbjct: 316 DARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACD 375

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
           +  AL  G  +H+Y+ K+G + + I+ TALVDMY+KCG +  + R+F E   + +  W+A
Sbjct: 376 QIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSA 435

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           M+AGYG+HG G EA+     M+ + V P+   F  +L+ACSHAGLV EGK +F KM    
Sbjct: 436 MVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKEY 495

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
            + P + HY CMVDLLGRAG LDEA+ +I++M ++P   +W ALL AS+LHKN  + EI+
Sbjct: 496 NVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLAEIS 555

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHK 627
           A ++ ++ P+     + +SNIYA   RW+DV  VR +++   +KK PG S +E++ +VH+
Sbjct: 556 AQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIELDNMVHR 615

Query: 628 FIRG 631
           F+ G
Sbjct: 616 FLVG 619



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 215/421 (51%), Gaps = 7/421 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y  N  P  +L +Y  M   G   DNFT P +LKAC  +L+  +G+ +H   +
Sbjct: 129 WNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVV 188

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             GL+ D YV N+L+ MY++ G + +AR +FD M  RD+ SW+TMI GY +      A  
Sbjct: 189 VCGLESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFL 248

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V   M    +      ++ ++S  AD+  V  GK IH   VRN            +LI+M
Sbjct: 249 VFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIG-NYNKFFTNSLIEM 307

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y  C  +  A++LF R+     VSW  MI GY R  +  E +RLF  M  +   P ++T 
Sbjct: 308 YCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTF 367

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           ++++  C  +  L+ G  +H+Y+++ GF+ +  +  ALVDMY KC  +  +R +FD M  
Sbjct: 368 IAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPD 427

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K ++ W+A+++ Y       +A  +   MK + V P+      +LS C+ AG +  GK +
Sbjct: 428 KSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEI 487

Query: 399 HTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAY---RLFSEAIYRDICMWNAMMAGYGM 454
              +EK+  ++  +   + +VD+  + G ++ AY   R        DI  W A++    +
Sbjct: 488 FYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDI--WAALLTASRL 545

Query: 455 H 455
           H
Sbjct: 546 H 546



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 171/319 (53%), Gaps = 7/319 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           LT +N++++ Y KN    +A  ++  M K G   D  T+  +L ACA +     GK IHG
Sbjct: 227 LTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHG 286

Query: 96  FAIKNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           +A++N + + + + +N+LI+MY  C  +V AR LF+ +  +D VSW++MI GY R G   
Sbjct: 287 YAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAF 346

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           E+L + R M      P +V  I+++     +A +  G +IH+ +V+   D      + TA
Sbjct: 347 ESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDAN--TIVGTA 404

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+DMYSKCG+LA ++++F+ +   S+VSW+ M++GY       E + +   M   +V P 
Sbjct: 405 LVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPD 464

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA--NALVDMYGKCREIRSARTL 332
                S++  C   G +  GK +  Y +   +    A++  + +VD+ G+   +  A  +
Sbjct: 465 NGVFTSILSACSHAGLVVEGKEIF-YKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVI 523

Query: 333 FDGMKSKDVM-IWNAVISA 350
              M+ K    IW A+++A
Sbjct: 524 IRTMEIKPTSDIWAALLTA 542



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 122/246 (49%), Gaps = 7/246 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++  Y +N     +L ++  M  +GS  D  T   +L AC Q+     G  IH + +
Sbjct: 332 WNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGACDQIAALRYGMSIHSYLV 391

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G D +  V  AL+ MYS+CGSL  +R +FDEMP++ +VSWS M+ GY   G   EA+ 
Sbjct: 392 KKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWSAMVAGYGLHGRGREAIS 451

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++  M+   + P      S++S  +    V  GK I   + +   + K  ++  + ++D+
Sbjct: 452 ILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKE-YNVKPALSHYSCMVDL 510

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVS-WTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
             + G+L  A  +   +        W  +++     + +++ ++L AE+  + VF     
Sbjct: 511 LGRAGHLDEAYVIIRTMEIKPTSDIWAALLTA----SRLHKNIKL-AEISAQKVFDMNPK 565

Query: 278 ILSLII 283
           ++S  I
Sbjct: 566 VVSSYI 571


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 206/594 (34%), Positives = 326/594 (54%), Gaps = 9/594 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y K  +   +L ++  M + G   D   +  +LK    +     G   HG+ +
Sbjct: 378 WNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLV 437

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G      V NALI  Y++   + +A  +FD MP++D +SW+++I G    GL  EA+E
Sbjct: 438 KLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIE 497

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG-VAIATALID 217
           +   M           ++S++   A      +G+ +H   V   K   +G  ++A AL+D
Sbjct: 498 LFVRMWMQGHELDSTTLLSVLPACARSHYWFVGRVVHGYSV---KTGLIGETSLANALLD 554

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYS C +     Q+F  + Q +VVSWT MI+ Y R    ++   L  EM+ + + P    
Sbjct: 555 MYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFA 614

Query: 278 ILSLIIECGFVG--GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           + S++   GF G   L+ GK +H Y +RNG E  L +ANAL++MY  CR +  AR +FD 
Sbjct: 615 VTSVLH--GFAGDESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDH 672

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           + +KD++ WN +I  Y++ +  +++F LF  M + + +PN VTM  +L       +LE G
Sbjct: 673 VTNKDIISWNTLIGGYSRNNFANESFSLFSDMLL-QFKPNTVTMTCILPAVASISSLERG 731

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H Y  ++G   D     ALVDMY KCG +  A  LF     +++  W  M+AGYGMH
Sbjct: 732 REIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMH 791

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           GCG++A+  F  M  SGV+P+  +F  +L AC H+GL  EG   F+ M     + PK++H
Sbjct: 792 GCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKH 851

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y C+VDLL   G L EA E I+SMP+ P+  +W +LL   ++H++  + E  A ++ ++E
Sbjct: 852 YTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLE 911

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           P+N GY VL++NIYA A RW  V  ++  +    +++  G S +EV G VH FI
Sbjct: 912 PENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFI 965



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 236/470 (50%), Gaps = 10/470 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + SL+++Y K       ++++  M+  G   D   +  +LK  A +     G+ IHG   
Sbjct: 166 WTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLE 225

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL     V+NALI +YS CG +  A  +FD M  RD +SW++ I GY   G  + A++
Sbjct: 226 KLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVD 285

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-----NCKDEKLGV--AI 211
           +  +M       S V ++S++   A++    +GK +H   ++     + +  + G+  A+
Sbjct: 286 LFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEAL 345

Query: 212 ATALIDMYSKCGNLAYAKQLFNRL-NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
            + L+ MY KCG++  A+++F+ + ++ +V  W +++ GY +  E  E + LF +M E  
Sbjct: 346 GSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELG 405

Query: 271 VFPSEITILSLIIEC-GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
           + P E   LS +++C   +   + G   H Y+++ GF    A+ NAL+  Y K   I +A
Sbjct: 406 ITPDE-HALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNA 464

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             +FD M  +D + WN+VIS         +A ELF+ M +     +  T++ +L  C  +
Sbjct: 465 VLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARS 524

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
               +G+ +H Y  K GL  +  L  AL+DMY+ C D +   ++F     +++  W AM+
Sbjct: 525 HYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMI 584

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
             Y   G  ++      +M   G+KP+      +L+  +    + +GKSV
Sbjct: 585 TSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSV 634



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 148/546 (27%), Positives = 264/546 (48%), Gaps = 40/546 (7%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSE--VDNFTIPTILKACAQVLMTHLGK 91
           NP +R  S   + ++  +   A ++ A +R  GS+  V   +   +++ C +       +
Sbjct: 56  NPPSRVLSSDVN-LRIQRLCQAGDLAAALRLLGSDGGVGVRSYCAVVQLCGEERSLEAAR 114

Query: 92  EIHGFAIKNGLDG--DAYVSNALIQMYSECGSLVSARYLFDEMPNR--DVVSWSTMIRGY 147
             H   ++ G  G   + +   L+  Y +CG L  AR +FDEMP R  DV  W++++  Y
Sbjct: 115 RAHAL-VRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTSLMSAY 173

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
            + G  +E + + R+M+   + P   A+  ++   A +  +  G+ IH  +      EKL
Sbjct: 174 AKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLL------EKL 227

Query: 208 GV----AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
           G+    A+A ALI +YS+CG +  A Q+F+ ++    +SW   ISGY      +  V LF
Sbjct: 228 GLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLF 287

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL---------AMAN 314
           ++M  E    S +T+LS++  C  +G   +GK +H Y +++G  + L         A+ +
Sbjct: 288 SKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGS 347

Query: 315 ALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
            LV MY KC ++ SAR +FD M SK +V +WN ++  YA+A   +++  LF  M    + 
Sbjct: 348 KLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGIT 407

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           P+E  +  LL   T       G   H Y+ K G      +  AL+  YAK   ++ A  +
Sbjct: 408 PDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMIDNAVLV 467

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA--- 490
           F    ++D   WN++++G   +G   EA+  FV M   G + +  T + +L AC+ +   
Sbjct: 468 FDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYW 527

Query: 491 --GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
             G V  G SV        GL+ +      ++D+          +++ ++M  + N++ W
Sbjct: 528 FVGRVVHGYSV------KTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMA-QKNVVSW 580

Query: 549 GALLAA 554
            A++ +
Sbjct: 581 TAMITS 586


>gi|356504054|ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g05240-like [Glycine max]
          Length = 563

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/562 (35%), Positives = 322/562 (57%), Gaps = 15/562 (2%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMY--SECGSLVSARYLFD 130
           TI ++L  C    M  L K++HG  +           + LI     SE G +  A  +  
Sbjct: 6   TILSLLAKCKS--MREL-KKLHGLIVTTPTIKSIIPLSKLIDFCVDSEFGDINYADLVLR 62

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
           ++ N  V  W++MIRG+     P  ++ + R+M      P       ++     +AD D 
Sbjct: 63  QIHNPSVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIADQDC 122

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           GK IH+C+V++    +     AT L+ MY  C ++    ++F+ + + +VV+WT +I+GY
Sbjct: 123 GKCIHSCIVKS--GFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGY 180

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE--- 307
           ++ N+  E +++F +M   NV P+EIT+++ +I C     +  G+W+H  I + G++   
Sbjct: 181 VKNNQPYEALKVFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYDPFM 240

Query: 308 ----FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
                ++ +A A+++MY KC  ++ AR LF+ M  ++++ WN++I+AY Q     +A +L
Sbjct: 241 STSNSNIILATAILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDL 300

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F  M  S V P++ T + +LS+C    AL +G+ +H Y+ K G+  D+ L TAL+DMYAK
Sbjct: 301 FFDMWTSGVYPDKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDISLATALLDMYAK 360

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM-ERSGVKPNGITFIG 482
            G++  A ++FS    +D+ MW +M+ G  MHG G EAL  F  M E S + P+ IT+IG
Sbjct: 361 TGELGNAQKIFSSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHITYIG 420

Query: 483 LLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
           +L ACSH GLV E K  F  M    G+VP  EHYGCMVDLL RAG   EA  ++++M ++
Sbjct: 421 VLFACSHVGLVEEAKKHFRLMTEMYGMVPGREHYGCMVDLLSRAGHFREAERLMETMTVQ 480

Query: 543 PNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVR 602
           PN+ +WGALL   ++H+N  +      ++ E+EP   G ++L+SNIYA A RW +V   R
Sbjct: 481 PNIAIWGALLNGCQIHENVCVANQVKVRLKELEPCQSGVHILLSNIYAKAGRWEEVNVTR 540

Query: 603 RVMKEIRVKKEPGFSSVEVNGL 624
           +VMK  R+ K  G SSVE+  L
Sbjct: 541 KVMKHKRITKTIGHSSVEMKLL 562



 Score =  252 bits (643), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 132/425 (31%), Positives = 235/425 (55%), Gaps = 8/425 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++  ++ ++ P  ++ +Y  M +NG   D+FT P +LKAC  +     GK IH   +
Sbjct: 72  WNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACCVIADQDCGKCIHSCIV 131

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G + DAY +  L+ MY  C  + S   +FD +P  +VV+W+ +I GY +   P EAL+
Sbjct: 132 KSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTCLIAGYVKNNQPYEALK 191

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA-----IAT 213
           V  +M   ++ P+E+ M++ +   A   D+D G+ +H  + +   D  +  +     +AT
Sbjct: 192 VFEDMSHWNVEPNEITMVNALIACAHSRDIDTGRWVHQRIRKAGYDPFMSTSNSNIILAT 251

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           A+++MY+KCG L  A+ LFN++ Q ++VSW  MI+ Y +     E + LF +M    V+P
Sbjct: 252 AILEMYAKCGRLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDLFFDMWTSGVYP 311

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
            + T LS++  C     L LG+ +HAY+L+ G    +++A AL+DMY K  E+ +A+ +F
Sbjct: 312 DKATFLSVLSVCAHQCALALGQTVHAYLLKTGIATDISLATALLDMYAKTGELGNAQKIF 371

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV-SKVRPNEVTMVGLLSLCTEAGAL 392
             ++ KDV++W ++I+  A     ++A  +F  M+  S + P+ +T +G+L  C+  G +
Sbjct: 372 SSLQKKDVVMWTSMINGLAMHGHGNEALSMFQTMQEDSSLVPDHITYIGVLFACSHVGLV 431

Query: 393 EMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMA 450
           E   K      E  G+         +VD+ ++ G    A RL  +  +  +I +W A++ 
Sbjct: 432 EEAKKHFRLMTEMYGMVPGREHYGCMVDLLSRAGHFREAERLMETMTVQPNIAIWGALLN 491

Query: 451 GYGMH 455
           G  +H
Sbjct: 492 GCQIH 496



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 107/216 (49%), Gaps = 3/216 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +NS++ +Y +  +   AL+++  M  +G   D  T  ++L  CA      LG+ +H 
Sbjct: 278 IVSWNSMINAYNQYERHQEALDLFFDMWTSGVYPDKATFLSVLSVCAHQCALALGQTVHA 337

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + +K G+  D  ++ AL+ MY++ G L +A+ +F  +  +DVV W++MI G    G   E
Sbjct: 338 YLLKTGIATDISLATALLDMYAKTGELGNAQKIFSSLQKKDVVMWTSMINGLAMHGHGNE 397

Query: 156 ALEVMREMRF-MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           AL + + M+    + P  +  I ++   + V  V+  K  H  ++        G      
Sbjct: 398 ALSMFQTMQEDSSLVPDHITYIGVLFACSHVGLVEEAKK-HFRLMTEMYGMVPGREHYGC 456

Query: 215 LIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISG 249
           ++D+ S+ G+   A++L   +  Q ++  W  +++G
Sbjct: 457 MVDLLSRAGHFREAERLMETMTVQPNIAIWGALLNG 492


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 208/652 (31%), Positives = 341/652 (52%), Gaps = 76/652 (11%)

Query: 31  NIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
            I + +T YN+ +  + +     +A+ +    +K  SE++  T  ++L+ CA +     G
Sbjct: 61  TIDHQVTDYNAKILHFCQLGDLENAMELICMCQK--SELETKTYGSVLQLCAGLKSFTDG 118

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY----------------------- 127
           K++H     N +  D  +   L+  Y+ CG L   R                        
Sbjct: 119 KKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKI 178

Query: 128 ----------------------------LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
                                       LFD++ +RDV+SW++MI GY   GL E  L +
Sbjct: 179 GDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGI 238

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
            ++M ++ I      +IS++   A+   + LGKA+H+  +++  + +  +  +  L+DMY
Sbjct: 239 YKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERR--INFSNTLLDMY 296

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
           SKCG+L  A ++F ++ + +VVSWT MI+GY R    +  ++L  +M +E V    + I 
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAIT 356

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           S++  C   G L  GK +H YI  N  E +L + NAL+DMY KC  + +A ++F  M  K
Sbjct: 357 SILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVK 416

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           D++ WN +I                      +++P+  TM  +L  C    ALE GK +H
Sbjct: 417 DIISWNTMIG---------------------ELKPDSRTMACVLPACASLSALERGKEIH 455

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
            YI + G   D  +  ALVD+Y KCG +  A  LF     +D+  W  M+AGYGMHG G 
Sbjct: 456 GYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGN 515

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           EA+  F +M  +G++P+ ++FI +L ACSH+GL+ +G   F  M +   + PK+EHY CM
Sbjct: 516 EAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACM 575

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNY 579
           VDLL R G L +A+E ++++P+ P+  +WGALL   + + +  + E  A ++ E+EP+N 
Sbjct: 576 VDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENT 635

Query: 580 GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           GY VL++NIYA A +W +V  +R  + +  ++K PG S +E+ G V+ F+ G
Sbjct: 636 GYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSG 687


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 199/593 (33%), Positives = 324/593 (54%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+++Y+KN++   A+ ++  M  +G +   F    ++ AC        G+++H   +
Sbjct: 170 WNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVV 229

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G + D + +NAL+ MY + G +  A  +F++MP+ DVVSW+ +I G    G    A+E
Sbjct: 230 RMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIE 289

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++ +M+   + P+   + S++   A     DLG+ IH  +++   D      I   L+DM
Sbjct: 290 LLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSD--DYIGVGLVDM 347

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K   L  A ++F+ ++   ++ W  +ISG       +E   +F  + +E +  +  T+
Sbjct: 348 YAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTL 407

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            +++     +      + +HA   + GF F   + N L+D Y KC  +  A  +F+   S
Sbjct: 408 AAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSS 467

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D++   ++I+A +Q    + A +LF+ M    + P+   +  LL+ C    A E GK +
Sbjct: 468 GDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQV 527

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ K+    D     ALV  YAKCG +  A   FS    R +  W+AM+ G   HG G
Sbjct: 528 HAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHG 587

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           + AL  F  M   G+ PN IT   +L AC+HAGLV E K  F+ M    G+    EHY C
Sbjct: 588 KRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSC 647

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           M+DLLGRAG LD+A E++ SMP + N  VWGALL AS++HK+P +G++AA ++  +EP+ 
Sbjct: 648 MIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEK 707

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            G +VL++N YA +  WN+VA VR++MK+  +KKEP  S VEV   VH FI G
Sbjct: 708 SGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVG 760



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 150/532 (28%), Positives = 256/532 (48%), Gaps = 9/532 (1%)

Query: 29  YTNIINPL-TRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  I +P    ++SLVT+Y  N  P SA+  +  MR  G   + F +P +LK    V   
Sbjct: 60  FDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDA 116

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM-PNRDVVSWSTMIRG 146
            LG ++H  A+  G   D +V+NAL+ MY   G +  AR +FDE    R+ VSW+ ++  
Sbjct: 117 QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA 176

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           Y +     +A++V  EM +  I+P+E     +V+      ++D G+ +HA VVR   ++ 
Sbjct: 177 YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKD 236

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
             V  A AL+DMY K G +  A  +F ++  + VVSW  +ISG +     +  + L  +M
Sbjct: 237 --VFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQM 294

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
               + P+   + S++  C   G   LG+ +H ++++   +    +   LVDMY K   +
Sbjct: 295 KSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFL 354

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             A  +FD M  +D+++WNA+IS  +     D+AF +F  ++   +  N  T+  +L   
Sbjct: 355 DDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKST 414

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
               A    + +H   EK G   D  +   L+D Y KC  ++ A R+F E    DI    
Sbjct: 415 ASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVT 474

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           +M+        GE A+  F++M R G++P+      LLNAC+      +GK V   ++  
Sbjct: 475 SMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             +         +V    + G +++A     S+P R  ++ W A++     H
Sbjct: 535 QFMSDAFAG-NALVYTYAKCGSIEDAELAFSSLPER-GVVSWSAMIGGLAQH 584



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 212/408 (51%), Gaps = 10/408 (2%)

Query: 80  ACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVS 139
           A AQ L+   G  +H   +K+G    A + N LI  YS+C     AR +FDE+P+   VS
Sbjct: 15  AAAQALLP--GAHLHANLLKSGFL--ASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVS 70

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           WS+++  Y   GLP  A++    MR   +  +E A+  ++     V D  LG  +HA  +
Sbjct: 71  WSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKC---VPDAQLGAQVHAMAM 127

Query: 200 RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL-NQNSVVSWTVMISGYIRCNEINE 258
                    V +A AL+ MY   G +  A+++F+   ++ + VSW  ++S Y++ ++  +
Sbjct: 128 ATGFGSD--VFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGD 185

Query: 259 GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
            +++F EM+   + P+E     ++  C     +  G+ +HA ++R G+E  +  ANALVD
Sbjct: 186 AIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVD 245

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
           MY K   +  A  +F+ M   DV+ WNA+IS         +A EL + MK S + PN   
Sbjct: 246 MYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFM 305

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
           +  +L  C  AGA ++G+ +H ++ K   + D  +   LVDMYAK   ++ A ++F    
Sbjct: 306 LSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMS 365

Query: 439 YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           +RD+ +WNA+++G    G  +EA   F  + + G+  N  T   +L +
Sbjct: 366 HRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS 413



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 172/340 (50%), Gaps = 6/340 (1%)

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LI  YSKC     A+++F+ +     VSW+ +++ Y         ++ F  M  E V  +
Sbjct: 43  LISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCN 102

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           E   L ++++C  V   QLG  +HA  +  GF   + +ANALV MYG    +  AR +FD
Sbjct: 103 EFA-LPVVLKC--VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFD 159

Query: 335 GMKS-KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
              S ++ + WN ++SAY +      A ++F  M  S ++P E     +++ CT +  ++
Sbjct: 160 EAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNID 219

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            G+ +H  + + G E DV    ALVDMY K G V+ A  +F +    D+  WNA+++G  
Sbjct: 220 AGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCV 279

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
           ++G    A+   + M+ SG+ PN      +L AC+ AG    G+ +   M+         
Sbjct: 280 LNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDY 339

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
              G +VD+  +   LD+A ++   M  R ++I+W AL++
Sbjct: 340 IGVG-LVDMYAKNHFLDDAMKVFDWMSHR-DLILWNALIS 377



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 160/318 (50%), Gaps = 6/318 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+L++      +   A +I+  +RK G  V+  T+  +LK+ A +      +++H 
Sbjct: 369 LILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHA 428

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A K G   DA+V N LI  Y +C  L  A  +F+E  + D+++ ++MI    +    E 
Sbjct: 429 LAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEG 488

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA-TA 214
           A+++  EM    + P    + S+++  A ++  + GK +HA ++   K + +  A A  A
Sbjct: 489 AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLI---KRQFMSDAFAGNA 545

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+  Y+KCG++  A+  F+ L +  VVSW+ MI G  +       + LF  M++E + P+
Sbjct: 546 LVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPN 605

Query: 275 EITILSLIIECGFVGGLQLGK-WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
            IT+ S++  C   G +   K + ++     G + +    + ++D+ G+  ++  A  L 
Sbjct: 606 HITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELV 665

Query: 334 DGMK-SKDVMIWNAVISA 350
           + M    +  +W A++ A
Sbjct: 666 NSMPFQANASVWGALLGA 683


>gi|357114151|ref|XP_003558864.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic-like [Brachypodium distachyon]
          Length = 782

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/602 (33%), Positives = 337/602 (55%), Gaps = 4/602 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  +     P +AL  Y  M   G+  D FT P ++K CA++     G+  H  AI
Sbjct: 75  HNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGRAAHSAAI 134

Query: 99  KNGLDG-DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           + GL G + Y  N+L+  Y++ G +  A  +FD MP RD+V+W++M+ GY   GL   AL
Sbjct: 135 RLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSNGLGALAL 194

Query: 158 EVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           +  REM   + ++   V +I+ ++     + +  G+ +HA V+R+  ++   V + T+L+
Sbjct: 195 DCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQD--VKVGTSLL 252

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           DMY KCG +A A+ +F  +   +VV+W  MI GY       E    F +M  E      +
Sbjct: 253 DMYCKCGAIASAEGMFATMPSRTVVTWNCMIGGYALNGCPEEAFDCFVQMKAEGHQVEVV 312

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T ++L+  C        G+ +H Y+ R+ F   + +  AL++MY K  +++S+ T+F  M
Sbjct: 313 TAINLLAACAQTESSLYGRSVHGYVTRSQFLPHVVLETALLEMYSKVGKVKSSETIFGQM 372

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
            +K ++ WN +I+AY      ++A  LF+ +    + P+  TM  ++      G L   +
Sbjct: 373 TNKTLVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCR 432

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H+YI +     + ++  A++ MYA+CGDV  + ++F +   +D+  WN ++ GY +HG
Sbjct: 433 QMHSYIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHG 492

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
            G+ AL  F +M+ +G++PN  TF+ +L ACS +G+  EG   F+ M    G++P+IEHY
Sbjct: 493 QGKIALEMFSEMKSNGLQPNESTFVSVLTACSVSGMADEGWIQFNLMQRDYGIIPQIEHY 552

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
           GCM DLLGRAG L E  + I+S+P+ P   +WG+LL AS+   +  + E AA +I E+E 
Sbjct: 553 GCMTDLLGRAGDLREVLKFIESIPITPTFRIWGSLLTASRNRNDIDIAEYAAERIFELEH 612

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNW 636
            N G  V++S++YA A RW DV  +R  M E  +++    S VE++G    F+ G M + 
Sbjct: 613 DNTGCYVILSSMYADAGRWEDVQRIRSSMMEKGLRRTDARSIVELHGSSCSFVNGDMTHP 672

Query: 637 KS 638
           +S
Sbjct: 673 QS 674



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 6/228 (2%)

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
            S D  + N VI  +A A   + A   +  M  +  RP+  T   ++  C   GALE G+
Sbjct: 68  SSPDAFLHNVVIRGFADAGLPEAALAAYRAMLAAGARPDRFTFPVVVKCCARLGALEEGR 127

Query: 397 WLHTYIEKQGL-EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             H+   + GL   +V    +L+  YAK G V  A R+F     RDI  WN+M+ GY  +
Sbjct: 128 AAHSAAIRLGLVGSEVYTGNSLLAFYAKLGMVADAERVFDGMPVRDIVTWNSMVDGYVSN 187

Query: 456 GCGEEALIFFVDM-ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVPKI 513
           G G  AL  F +M E   V+ +G+  I  L AC     + +G+ V   ++ HGL    K+
Sbjct: 188 GLGALALDCFREMHEGLQVQHDGVGIIAALAACCLDSALMQGREVHAYVIRHGLEQDVKV 247

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
                ++D+  + G +  A  M  +MP R  ++ W  ++    L+  P
Sbjct: 248 G--TSLLDMYCKCGAIASAEGMFATMPSR-TVVTWNCMIGGYALNGCP 292



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 84/145 (57%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++ +Y+     + A+ ++  +       D FT+  ++ A   + +    +++H 
Sbjct: 377 LVSWNNMIAAYMYKEMYNEAITLFLELLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHS 436

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + ++     +  V+NA++ MY+ CG +VS+R +FD+M  +DV+SW+T+I GY   G  + 
Sbjct: 437 YIVRLDYGENTLVTNAVMHMYARCGDVVSSRKIFDKMAGKDVISWNTIIMGYAIHGQGKI 496

Query: 156 ALEVMREMRFMDIRPSEVAMISMVS 180
           ALE+  EM+   ++P+E   +S+++
Sbjct: 497 ALEMFSEMKSNGLQPNESTFVSVLT 521


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/593 (34%), Positives = 334/593 (56%), Gaps = 11/593 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG-FA 97
           + S++T+Y +N    +AL++Y  M    + V      T+L ACA +     GK IH   +
Sbjct: 92  WGSMLTAYAQNGHYRAALDLYKRMDLQPNPV---VYTTVLGACASIEALEEGKAIHSRIS 148

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMIRGYHRGGLPEEA 156
              GL  D  + N+L+ MY++CGSL  A+ LF+ M   R V SW+ MI  Y + G  EEA
Sbjct: 149 GTKGLKLDVILENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEA 208

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           + +  +M   D+ PS     S++S  +++  +D G+ IHA +  + +  +L +++  AL+
Sbjct: 209 IRLYEDM---DVEPSVRTFTSVLSACSNLGLLDQGRKIHALI--SSRGTELDLSLQNALL 263

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
            MY++C  L  A ++F RL +  VVSW+ MI+ +   +  +E +  +++M  E V P+  
Sbjct: 264 TMYARCKCLDDAAKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYY 323

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T  S+++ C  VG L+ G+ +H  IL NG++ +L    ALVD+Y     +  AR+LFD +
Sbjct: 324 TFASVLLACASVGDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQI 383

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMK-VSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +++D  +W  +I  Y++        EL+  MK  +KV   ++    ++S C   GA    
Sbjct: 384 ENRDEGLWTVLIGGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADA 443

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           +  H+ IE  G+  D +L T+LV+MY++ G++  A ++F +   RD   W  ++AGY  H
Sbjct: 444 RQAHSDIEADGMISDFVLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKH 503

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G    AL  + +ME  G +P+ +TF+ +L ACSHAGL  +GK +F  +     + P I H
Sbjct: 504 GEHGLALGLYKEMELEGAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAH 563

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y C++DLL RAG L +A E+I +MP+ PN + W +LL AS++HK+      AA QI +++
Sbjct: 564 YSCIIDLLSRAGRLSDAEELINAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLD 623

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           P +    VL+SN++AV      +A VR  M    VKK  G S +EV   +H+F
Sbjct: 624 PVDPASYVLLSNVHAVTGNLAGMASVRNTMVARGVKKRRGSSWIEVADQIHEF 676



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 139/470 (29%), Positives = 245/470 (52%), Gaps = 12/470 (2%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           ++IH   I      + ++ N +++ Y +CGS+ SAR  FD +  ++  SW +M+  Y + 
Sbjct: 44  RQIHD-RISGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQN 102

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           G    AL++ +    MD++P+ V   +++   A +  ++ GKAIH+  +   K  KL V 
Sbjct: 103 GHYRAALDLYKR---MDLQPNPVVYTTVLGACASIEALEEGKAIHS-RISGTKGLKLDVI 158

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
           +  +L+ MY+KCG+L  AK+LF R++ + SV SW  MI+ Y +     E +RL+ +M   
Sbjct: 159 LENSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM--- 215

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
           +V PS  T  S++  C  +G L  G+ +HA I   G E  L++ NAL+ MY +C+ +  A
Sbjct: 216 DVEPSVRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDA 275

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             +F  +  +DV+ W+A+I+A+A+    D+A E +  M++  VRPN  T   +L  C   
Sbjct: 276 AKIFQRLPRRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASV 335

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           G L  G+ +H  I   G ++ ++  TALVD+Y   G ++ A  LF +   RD  +W  ++
Sbjct: 336 GDLRAGRAVHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLI 395

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKP-NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
            GY   G     L  + +M+ +   P   I +  +++AC+  G   + +      +   G
Sbjct: 396 GGYSKQGHRTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSD-IEADG 454

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           ++        +V++  R G L+ A ++   M  R + + W  L+A    H
Sbjct: 455 MISDFVLATSLVNMYSRWGNLESARQVFDKMSSR-DTLAWTTLIAGYAKH 503


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 201/600 (33%), Positives = 346/600 (57%), Gaps = 10/600 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFM---RKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           L  +NS++ +  +N        ++  +    + G   D  T+ T++ ACA V    +G  
Sbjct: 261 LVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMV 320

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HG A K G+  +  V+N+L+ MYS+CG L  AR LFD    ++VVSW+T+I GY + G 
Sbjct: 321 VHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGD 380

Query: 153 PEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGV 209
                E+++EM R   +R +EV +++++   +    +   K IH    R+   KDE    
Sbjct: 381 FRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDE---- 436

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            +A A +  Y+KC +L  A+++F  +   +V SW  +I  + +     + + LF  M++ 
Sbjct: 437 LVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDS 496

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            + P   TI SL++ C  +  L+ GK +H ++LRNG E    +  +L+ +Y +C  +   
Sbjct: 497 GMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLG 556

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           + +FD M++K ++ WN +I+ ++Q     +A + F  M    ++P E+ + G+L  C++ 
Sbjct: 557 KLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQV 616

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            AL +GK +H++  K  L  D  +  AL+DMYAKCG +  +  +F     +D  +WN ++
Sbjct: 617 SALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVII 676

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           AGYG+HG G +A+  F  M+  G +P+  TF+G+L AC+HAGLVTEG     +M +  G+
Sbjct: 677 AGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGV 736

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            PK+EHY C+VD+LGRAG L EA +++  MP  P+  +W +LL++ + + +  +GE  + 
Sbjct: 737 KPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSK 796

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           ++LE+EP      VL+SN+YA   +W++V  VR+ MKE  + K+ G S +E+ G+V++F+
Sbjct: 797 KLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMVYRFL 856



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 161/529 (30%), Positives = 264/529 (49%), Gaps = 17/529 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIY-AFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           YN+L++ Y +N     A++++   +       DNFT+P + KACA V    LG+ +H  A
Sbjct: 162 YNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAVHALA 221

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K G   DA+V NALI MY +CG + SA  +F+ M NR++VSW++++      G   E  
Sbjct: 222 LKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGFGECC 281

Query: 158 EVMREMRFMD---IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
            V + +   +   + P    M++++   A V +V +G  +H    +    E+  V +  +
Sbjct: 282 GVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEE--VTVNNS 339

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI-EENVFP 273
           L+DMYSKCG L  A+ LF+     +VVSW  +I GY +  +      L  EM  EE V  
Sbjct: 340 LVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRV 399

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +E+T+L+++  C     L   K +H Y  R+GF     +ANA V  Y KC  +  A  +F
Sbjct: 400 NEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVF 459

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
            GM+ K V  WNA+I A+AQ     K+ +LF+ M  S + P+  T+  LL  C     L 
Sbjct: 460 CGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLR 519

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            GK +H ++ + GLE+D  +  +L+ +Y +C  +     +F +   + +  WN M+ G+ 
Sbjct: 520 CGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFS 579

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +    EAL  F  M   G+KP  I   G+L ACS    +  GK      VH   L   +
Sbjct: 580 QNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKE-----VHSFALKAHL 634

Query: 514 EHYG----CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
                    ++D+  + G ++++  +   +    +  VW  ++A   +H
Sbjct: 635 SEDAFVTCALIDMYAKCGCMEQSQNIFDRVN-EKDEAVWNVIIAGYGIH 682



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 251/521 (48%), Gaps = 37/521 (7%)

Query: 17  HAHIIKTHFKFSYT-------NIINPLTRYNSLVTSYIKNNKP--------------SSA 55
           H H +  H + ++T       N+  P T   S +TS+ K + P              + A
Sbjct: 13  HYHKLTFHNRNTWTRNHNNSNNLFPPFTVPKSSLTSHTKTHSPILQRLHNLCDSGNLNDA 72

Query: 56  LNIYAFMRKNG----SEVDNFTIPTILKACAQVLMTHLGKEIHGF-AIKNGLDGDAYVSN 110
           LN+     +NG    S++    I  +L+AC      H+G+++H   +  + L  D  +S 
Sbjct: 73  LNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLST 132

Query: 111 ALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE-MRFMDIR 169
            +I MYS CGS   +R +FD    +D+  ++ ++ GY R  L  +A+ +  E +   D+ 
Sbjct: 133 RIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLA 192

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVR--NCKDEKLGVAIATALIDMYSKCGNLAY 227
           P    +  +    A VADV+LG+A+HA  ++     D  +G     ALI MY KCG +  
Sbjct: 193 PDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVG----NALIAMYGKCGFVES 248

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI---EENVFPSEITILSLIIE 284
           A ++F  +   ++VSW  ++          E   +F  ++   EE + P   T++++I  
Sbjct: 249 AVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPA 308

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
           C  VG +++G  +H    + G    + + N+LVDMY KC  +  AR LFD    K+V+ W
Sbjct: 309 CAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSW 368

Query: 345 NAVISAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           N +I  Y++       FEL   M +  KVR NEVT++ +L  C+    L   K +H Y  
Sbjct: 369 NTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAF 428

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
           + G   D ++  A V  YAKC  ++ A R+F     + +  WNA++  +  +G   ++L 
Sbjct: 429 RHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLD 488

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
            F+ M  SG+ P+  T   LL AC+    +  GK +   M+
Sbjct: 489 LFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFML 529



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 91/186 (48%), Gaps = 6/186 (3%)

Query: 382 LLSLCTEAGALEMGKWLHTYIE-KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
           LL  C     + +G+ +H  +     L  DV+L T ++ MY+ CG  + +  +F  A  +
Sbjct: 98  LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVD-MERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           D+ ++NA+++GY  +    +A+  F++ +  + + P+  T   +  AC+    V  G++V
Sbjct: 158 DLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAV 217

Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK 559
               +   G          ++ + G+ G ++ A ++ ++M  R N++ W +++ A    +
Sbjct: 218 HALALKAGGFSDAFVG-NALIAMYGKCGFVESAVKVFETMRNR-NLVSWNSVMYACS--E 273

Query: 560 NPSMGE 565
           N   GE
Sbjct: 274 NGGFGE 279


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 209/568 (36%), Positives = 325/568 (57%), Gaps = 14/568 (2%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL-DGDAYVSNALIQMYSECGSLVSARYL 128
           D+FT P +++A           ++H  A++ GL   + + S +L+  Y   G +  A  +
Sbjct: 68  DSFTFPPLVRAAPGPASA---AQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRV 124

Query: 129 FDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV 188
           FDEMP RDV +W+ M+ G  R     +A+ ++  M    +    V + S++ +   + D 
Sbjct: 125 FDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDR 184

Query: 189 DLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
            L   +H   V++    +L V    ALID+Y K G L  A  +F  +    +V+W  +IS
Sbjct: 185 ALALVMHVYAVKHGLSGELFVC--NALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIIS 242

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSL---IIECGFVGGLQLGKWLHAYILRNG 305
              +  ++   V LF  M+E  V P  +T++SL   + +CG   G    K +H Y+ R G
Sbjct: 243 ANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELG---AKSVHCYVRRRG 299

Query: 306 FEFSLAMA-NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
           ++    +A NA+VDMY K  +I +A+ +FD +  +DV+ WN +I+ Y Q    ++A  ++
Sbjct: 300 WDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIY 359

Query: 365 IHMKVSK-VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
             M   + ++P + T V +L   +  G L+ G  +H    K GL +DV + T L+D+YAK
Sbjct: 360 NDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAK 419

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
           CG +  A  LF     R    WNA++AG G+HG G +AL  F  M++  +KP+ +TF+ L
Sbjct: 420 CGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSL 479

Query: 484 LNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           L ACSHAGLV +G+S FD M    G+VP  +HY CMVD+LGRAG LDEA E I+SMP++P
Sbjct: 480 LAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKP 539

Query: 544 NMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRR 603
           +  VWGALL A ++H N  MG++A+  + E++P+N GY VLMSN+YA   +W+ V  VR 
Sbjct: 540 DSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRS 599

Query: 604 VMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +++   ++K PG+SS+EV G V  F  G
Sbjct: 600 LVRRQNLQKTPGWSSMEVKGSVSVFYSG 627


>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 608

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 184/421 (43%), Positives = 267/421 (63%), Gaps = 3/421 (0%)

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF- 272
           +LI MYS+CG +A+A+++F+ + +  +VSW  MI+GY +     E V +F EM   + F 
Sbjct: 156 SLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFE 215

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P E++++S++  CG +G L+LG+W+  +++  G   +  + +AL+ MY KC ++ SAR +
Sbjct: 216 PDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSARRI 275

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FDGM ++DV+ WNAVIS YAQ    D+A  LF  MK   V  N++T+  +LS C   GAL
Sbjct: 276 FDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIGAL 335

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           ++GK +  Y  ++G + D+ + TAL+DMYAKCG +  A R+F E   ++   WNAM++  
Sbjct: 336 DLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISAL 395

Query: 453 GMHGCGEEALIFFVDM--ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
             HG  +EAL  F  M  E  G +PN ITF+GLL+AC HAGLV EG  +FD M    GLV
Sbjct: 396 ASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLV 455

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           PKIEHY CMVDLL RAG L EA ++I+ MP +P+ +  GALL A +  KN  +GE     
Sbjct: 456 PKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGACRSKKNVDIGERVIRM 515

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIR 630
           ILE++P N G  ++ S IYA  N W D A +R +M++  + K PG S +EV   +H+F  
Sbjct: 516 ILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHA 575

Query: 631 G 631
           G
Sbjct: 576 G 576



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 126/361 (34%), Positives = 202/361 (55%), Gaps = 6/361 (1%)

Query: 80  ACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVS 139
           +CA + +    +  H    K  L  D + +++LI MYS CG +  AR +FDE+P RD+VS
Sbjct: 125 SCANLAVLSPARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVS 184

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACV 198
           W++MI GY + G   EA+EV  EM   D   P E++++S++    ++ D++LG+ +   V
Sbjct: 185 WNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFV 244

Query: 199 VRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE 258
           V   +   L   I +ALI MY+KCG+L  A+++F+ +    V++W  +ISGY +    +E
Sbjct: 245 VE--RGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADE 302

Query: 259 GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
            + LF  M E+ V  ++IT+ +++  C  +G L LGK +  Y  + GF+  + +A AL+D
Sbjct: 303 AISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALID 362

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM--KVSKVRPNE 376
           MY KC  + SA+ +F  M  K+   WNA+ISA A      +A  LF  M  +    RPN+
Sbjct: 363 MYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPND 422

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
           +T VGLLS C  AG +  G  L   +    GL   +   + +VD+ A+ G +  A+ L  
Sbjct: 423 ITFVGLLSACVHAGLVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIE 482

Query: 436 E 436
           +
Sbjct: 483 K 483



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 209/413 (50%), Gaps = 57/413 (13%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFM-RKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           L  +NS++  Y K      A+ ++  M R++G E D  ++ ++L AC ++    LG+ + 
Sbjct: 182 LVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVE 241

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           GF ++ G+  ++Y+ +ALI MY++CG L SAR +FD M  RDV++W+ +I GY + G+ +
Sbjct: 242 GFVVERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMAD 301

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           EA+ +   M+   +  +++ + +++S  A +  +DLGK I     +  +  +  + +ATA
Sbjct: 302 EAISLFHAMKEDCVTENKITLTAVLSACATIGALDLGKQIDEYASQ--RGFQHDIFVATA 359

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE--NVF 272
           LIDMY+KCG+LA A+++F  + Q +  SW  MIS      +  E + LF  M +E     
Sbjct: 360 LIDMYAKCGSLASAQRVFKEMPQKNEASWNAMISALASHGKAKEALSLFQCMSDEGGGAR 419

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P++IT + L+  C           +HA ++  G+         L DM           TL
Sbjct: 420 PNDITFVGLLSAC-----------VHAGLVNEGYR--------LFDMMS---------TL 451

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F G+  K +  ++ ++   A+A  + +A++L   M     +P++VT+  LL  C     +
Sbjct: 452 F-GLVPK-IEHYSCMVDLLARAGHLYEAWDLIEKM---PEKPDKVTLGALLGACRSKKNV 506

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
           ++G+ +   I    LEVD                 N    + S  IY ++ MW
Sbjct: 507 DIGERVIRMI----LEVD---------------PSNSGNYIISSKIYANLNMW 540


>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
 gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
          Length = 668

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 201/573 (35%), Positives = 328/573 (57%), Gaps = 36/573 (6%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           K+I    I  GL  D + S+ LI     SE  +L     + + + N +V SW+ +IRG  
Sbjct: 70  KQIQAQMILTGLILDGFASSRLISFCAISESRNLDYCIKILNNLQNPNVFSWNAVIRGCV 129

Query: 149 RGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
               P++ L + + M      RP       +  + A++    +G  I   V++   D+ +
Sbjct: 130 ESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSYMGFEILGQVLKMGFDKDM 189

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
              +   +I M    G    A ++F+      +VSW  +I+GY+R  +  E + ++ +MI
Sbjct: 190 --YLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYVRRRQPREAMGIYQQMI 247

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
            E+V P E+T++ ++  C  +  L+LG+ +H YI  +G    +++ NAL+DMY KC ++ 
Sbjct: 248 TEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLE 307

Query: 328 SARTLFDGMK-------------------------------SKDVMIWNAVISAYAQAHC 356
           + + LFD M+                                K+V+ WNA+I +  QA+ 
Sbjct: 308 AGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANL 367

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
             +A ELF  M+ S ++P++VTM+  LS C++ GAL+ G W H YI+K  L +DV L TA
Sbjct: 368 SFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLDVALGTA 427

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           L+DMYAKCG++  A ++F+E   R+   W A++ G  ++G   +A+ +F  M  SG+ P+
Sbjct: 428 LIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNVNDAIFYFSKMIDSGLMPD 487

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
            ITF+G+L AC H GLV EG+  FD+M     L P+ +HY CMV+LLGRAGLL+EA E+I
Sbjct: 488 EITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSCMVNLLGRAGLLEEAEELI 547

Query: 537 KSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWN 596
           K+MP+  + +VWGAL  A  +H+N  +GE AA+++L+++P + G  VL++N+Y  A +W 
Sbjct: 548 KTMPMEADAMVWGALFFACGIHRNLLIGERAASKLLDLDPHDSGIYVLLANMYREAGKWE 607

Query: 597 DVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +   +R++M E  V+K PG SS+EVNG++++FI
Sbjct: 608 EAQNIRKMMMERGVEKTPGSSSIEVNGIINEFI 640



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 149/514 (28%), Positives = 251/514 (48%), Gaps = 48/514 (9%)

Query: 31  NIINP-LTRYNSLVTSYIKNNKPSSALNIYAFM-RKNGSEVDNFTIPTILKACAQVLMTH 88
           N+ NP +  +N+++   +++  P   L +Y  M  + G   DN+T   + K CA +++++
Sbjct: 112 NLQNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCANLVLSY 171

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           +G EI G  +K G D D Y+ N +I M    G    A  +FDE   RD+VSW+++I GY 
Sbjct: 172 MGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNSLINGYV 231

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           R   P EA+ + ++M    ++P EV MI +VS  A +  + LG+ IH  +  +  +  L 
Sbjct: 232 RRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHRYIEESGLN--LK 289

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR---------------- 252
           +++  AL+DMY KCG+L   K LF+ + + +VVSWT MI GY +                
Sbjct: 290 ISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPE 349

Query: 253 ------------CNEIN---EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
                       C + N   E + LF EM   N+ P ++T+L  +  C  +G L  G W 
Sbjct: 350 KNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWT 409

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           H YI ++     +A+  AL+DMY KC  +  A  +F+ M  ++ + W A+I   A    +
Sbjct: 410 HNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLTWTAIIGGLALYGNV 469

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTA 416
           + A   F  M  S + P+E+T +G+L+ C   G +E G K+      +  L       + 
Sbjct: 470 NDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSRFNLSPQPKHYSC 529

Query: 417 LVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMHG---CGEEALIFFVDME--R 470
           +V++  + G +  A  L  +  +  D  +W A+    G+H     GE A    +D++   
Sbjct: 530 MVNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIHRNLLIGERAASKLLDLDPHD 589

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           SG+      ++ L N    AG   E +++   M+
Sbjct: 590 SGI------YVLLANMYREAGKWEEAQNIRKMMM 617


>gi|413938143|gb|AFW72694.1| hypothetical protein ZEAMMB73_533387 [Zea mays]
          Length = 663

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 218/592 (36%), Positives = 324/592 (54%), Gaps = 17/592 (2%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           N+L+ SY        AL +Y+ MR      D+ T     KACA + +   G+ +HG A+ 
Sbjct: 82  NTLLRSYSGLGFHRQALALYSQMR----HFDHLTFTFAAKACAGLRLRRHGRAVHGRALA 137

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
            G   DAYV NA++ MY  C  + +A  +F  +P+R  VSW+T+I G  + G  E ALEV
Sbjct: 138 AGFGSDAYVQNAIVSMYMRCRDVAAAEAVFVALPSRTTVSWNTVITGCVKDGRAERALEV 197

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLG--VAIATALI 216
              M    +     +++S++   A   D+  G+A+H   VVR      LG  VA+  ALI
Sbjct: 198 FETMVDRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAVVRG-----LGKYVAVKNALI 252

Query: 217 DMYSKCGNLAYAKQLFNRLNQN-SVVSWTVMISGYIRCNEINEGVRLFAEM-IEENVFPS 274
           DMY KCG+L  A+++F+  + +  VVSWTVMI  Y+  +  ++   L +EM +     P+
Sbjct: 253 DMYGKCGSLEDARRVFDEDSYDKDVVSWTVMIGAYVLNDHASKAFALGSEMLVSSEAQPN 312

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            +T+  L+  C  +   +  K  HA  +R G    + +  ALVD Y KC  +     + +
Sbjct: 313 AVTMAHLLSACASLLSGKHAKCTHALCIRLGLGSDIVVETALVDCYAKCGYMGVIDMVVE 372

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
              S+    WNA IS Y Q     KA  LF  M    VRP+  TM  ++    E+  L  
Sbjct: 373 -KGSRRTETWNAAISGYTQRDQGKKALALFKRMLAESVRPDSATMASVIPAYAESADLVQ 431

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
              +H  +  +G  V   + T L+D+YAK GD+  A+ LF     +D+  W  ++AGYGM
Sbjct: 432 ANNIHCCLLVRGCLVSTDIATGLIDLYAKAGDLGVAWELFQCLPEKDVVAWTTVIAGYGM 491

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL-GLVPKI 513
           HG  + A++ +  M   GV PN +T   LL++CSHAG+V EG  +F+ M HG+ GL+P  
Sbjct: 492 HGHAQTAMLLYSRMVELGVMPNTVTIASLLHSCSHAGMVDEGLRLFNDM-HGVHGLMPNA 550

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHY C+VD+LGRAG ++EA+  I+ MP  P + VW +LL A  LH+N   GE+AA  + E
Sbjct: 551 EHYLCLVDMLGRAGRIEEAYRRIEDMPFEPTVSVWSSLLGACVLHENVEFGEVAAKHLFE 610

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLV 625
           +EP N G  VL+  +YA A RW+DV  +RRVM+ + + K+PG+  V+    V
Sbjct: 611 LEPDNVGNYVLLGKVYAAAERWSDVQHLRRVMEGMDLHKDPGYCVVDAKSEV 662



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 205/425 (48%), Gaps = 15/425 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++T  +K+ +   AL ++  M   G  +D  ++ ++L ACAQ    H G+ +H  A+
Sbjct: 178 WNTVITGCVKDGRAERALEVFETMVDRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAV 237

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMIRGYHRGGLPEEAL 157
             GL     V NALI MY +CGSL  AR +FDE   ++DVVSW+ MI  Y       +A 
Sbjct: 238 VRGLGKYVAVKNALIDMYGKCGSLEDARRVFDEDSYDKDVVSWTVMIGAYVLNDHASKAF 297

Query: 158 EVMREMRF-MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIA 212
            +  EM    + +P+ V M  ++S  A +      K  HA  +R      LG    + + 
Sbjct: 298 ALGSEMLVSSEAQPNAVTMAHLLSACASLLSGKHAKCTHALCIR------LGLGSDIVVE 351

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           TAL+D Y+KCG +     +  + ++ +  +W   ISGY + ++  + + LF  M+ E+V 
Sbjct: 352 TALVDCYAKCGYMGVIDMVVEKGSRRT-ETWNAAISGYTQRDQGKKALALFKRMLAESVR 410

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P   T+ S+I        L     +H  +L  G   S  +A  L+D+Y K  ++  A  L
Sbjct: 411 PDSATMASVIPAYAESADLVQANNIHCCLLVRGCLVSTDIATGLIDLYAKAGDLGVAWEL 470

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F  +  KDV+ W  VI+ Y        A  L+  M    V PN VT+  LL  C+ AG +
Sbjct: 471 FQCLPEKDVVAWTTVIAGYGMHGHAQTAMLLYSRMVELGVMPNTVTIASLLHSCSHAGMV 530

Query: 393 EMGKWLHTYIEK-QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMA 450
           + G  L   +    GL  +      LVDM  + G +  AYR   +  +   + +W++++ 
Sbjct: 531 DEGLRLFNDMHGVHGLMPNAEHYLCLVDMLGRAGRIEEAYRRIEDMPFEPTVSVWSSLLG 590

Query: 451 GYGMH 455
              +H
Sbjct: 591 ACVLH 595



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 239/505 (47%), Gaps = 25/505 (4%)

Query: 79  KACAQVLMTHLGKEIHGFAIKNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
           K+ +  L+     ++H   + +G L  D+   + L+  Y  CG    A+ L  +MP    
Sbjct: 20  KSSSTPLVPTTTAQLHALLLTSGHLHYDS--PHLLLYSYCACGCPFDAQNLLAQMPQPAS 77

Query: 138 VSWS-TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL-----G 191
           VS S T++R Y   G   +AL +  +MR  D          +   FA  A   L     G
Sbjct: 78  VSVSNTLLRSYSGLGFHRQALALYSQMRHFD---------HLTFTFAAKACAGLRLRRHG 128

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           +A+H   +           +  A++ MY +C ++A A+ +F  L   + VSW  +I+G +
Sbjct: 129 RAVHGRALAAGFGSD--AYVQNAIVSMYMRCRDVAAAEAVFVALPSRTTVSWNTVITGCV 186

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +       + +F  M++  V     +++S++  C     L  G+ +H   +  G    +A
Sbjct: 187 KDGRAERALEVFETMVDRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAVVRGLGKYVA 246

Query: 312 MANALVDMYGKCREIRSARTLFD-GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV- 369
           + NAL+DMYGKC  +  AR +FD     KDV+ W  +I AY       KAF L   M V 
Sbjct: 247 VKNALIDMYGKCGSLEDARRVFDEDSYDKDVVSWTVMIGAYVLNDHASKAFALGSEMLVS 306

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
           S+ +PN VTM  LLS C    + +  K  H    + GL  D++++TALVD YAKCG + G
Sbjct: 307 SEAQPNAVTMAHLLSACASLLSGKHAKCTHALCIRLGLGSDIVVETALVDCYAKCGYM-G 365

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
              +  E   R    WNA ++GY     G++AL  F  M    V+P+  T   ++ A + 
Sbjct: 366 VIDMVVEKGSRRTETWNAAISGYTQRDQGKKALALFKRMLAESVRPDSATMASVIPAYAE 425

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           +  + +  ++   ++    LV      G ++DL  +AG L  A E+ + +P + +++ W 
Sbjct: 426 SADLVQANNIHCCLLVRGCLVSTDIATG-LIDLYAKAGDLGVAWELFQCLPEK-DVVAWT 483

Query: 550 ALLAASKLHKNPSMGEIAATQILEI 574
            ++A   +H +     +  ++++E+
Sbjct: 484 TVIAGYGMHGHAQTAMLLYSRMVEL 508


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/545 (36%), Positives = 309/545 (56%), Gaps = 3/545 (0%)

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
           H  K+ H   ++ GL  D Y+ N L++      +   A  +F + P+ ++  ++T+IRG 
Sbjct: 17  HQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGM 76

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD-VDLGKAIHACVVRNCKDEK 206
                  +A+ V   MR     P       ++     +     +G ++H+ V++   D  
Sbjct: 77  VSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFD-- 134

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
             V + T L+ +YSK G L  A+++F+ + + +VVSWT +I GYI      E + LF  +
Sbjct: 135 WDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGL 194

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
           +E  + P   T++ ++  C  VG L  G+W+  Y+  +G   ++ +A +LVDMY KC  +
Sbjct: 195 LEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSM 254

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             AR +FDGM  KDV+ W+A+I  YA      +A ++F  M+   VRP+   MVG+ S C
Sbjct: 255 EEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSAC 314

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
           +  GALE+G W    ++      + +L TAL+D YAKCG V  A  +F     +D  ++N
Sbjct: 315 SRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFN 374

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           A+++G  M G    A   F  M + G++P+G TF+GLL  C+HAGLV +G   F  M   
Sbjct: 375 AVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSV 434

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
             + P IEHYGCMVDL  RAGLL EA ++I+SMP+  N IVWGALL   +LHK+  + E 
Sbjct: 435 FSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEH 494

Query: 567 AATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVH 626
              Q++E+EP N G+ VL+SNIY+ ++RW++   +R  + +  ++K PG S VEV+G+VH
Sbjct: 495 VLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVH 554

Query: 627 KFIRG 631
           +F+ G
Sbjct: 555 EFLVG 559



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 149/481 (30%), Positives = 241/481 (50%), Gaps = 37/481 (7%)

Query: 6   GFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTR-------------------------YN 40
           G  +L Q +QCH  +++       T +IN L R                         YN
Sbjct: 12  GLKSLHQAKQCHCLLLRLGLH-QDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYN 70

Query: 41  SLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVL-MTHLGKEIHGFAIK 99
           +L+   + N+    A+++YA MR++G   DNFT P +LKAC ++    H+G  +H   IK
Sbjct: 71  TLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIK 130

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
            G D D +V   L+ +YS+ G L  AR +FDE+P ++VVSW+ +I GY   G   EAL +
Sbjct: 131 TGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGL 190

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
            R +  M +RP    ++ ++   + V D+  G+ I   +  +       V +AT+L+DMY
Sbjct: 191 FRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRES--GSVGNVFVATSLVDMY 248

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
           +KCG++  A+++F+ + +  VV W+ +I GY       E + +F EM  ENV P    ++
Sbjct: 249 AKCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMV 308

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
            +   C  +G L+LG W    +  + F  +  +  AL+D Y KC  +  A+ +F GM+ K
Sbjct: 309 GVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRK 368

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           D +++NAVIS  A    +  AF +F  M    ++P+  T VGLL  CT AG ++ G   H
Sbjct: 369 DCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDG---H 425

Query: 400 TYIEKQGLEVDVILKT----ALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGM 454
            Y         V         +VD+ A+ G +  A  L  S  +  +  +W A++ G  +
Sbjct: 426 RYFSGMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRL 485

Query: 455 H 455
           H
Sbjct: 486 H 486



 Score = 40.4 bits (93), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 36/170 (21%), Positives = 70/170 (41%), Gaps = 13/170 (7%)

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           +L   K  H  + + GL  D  L   L+           A  +F++  + +I ++N ++ 
Sbjct: 15  SLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIR 74

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS------HAGLVTEGKSVFDKMV 504
           G   +    +A+  +  M + G  P+  TF  +L AC+      H GL          +V
Sbjct: 75  GMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGL------SLHSLV 128

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
              G    +     +V L  + G L +A ++   +P + N++ W A++  
Sbjct: 129 IKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEK-NVVSWTAIICG 177


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 201/542 (37%), Positives = 316/542 (58%), Gaps = 20/542 (3%)

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           D +V++AL ++Y     +  AR +FD +P+ D V W+T++ G        EA+E    M 
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS----EAVESFARMV 203

Query: 165 FM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMY 219
               +RP    + S++   A+VADV +G+ +H+        EK G+A    + T LI +Y
Sbjct: 204 CDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFA------EKCGLAEHEHVLTGLISLY 257

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
           SKCG++  A+ LF+ + +  +V++  +ISGY     +   V LF E++   ++P+  T++
Sbjct: 258 SKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLV 317

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           +LI      G   L + LH ++L++GF  +  ++ A+  ++ +  ++ SAR  FD M  K
Sbjct: 318 ALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEK 377

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
            +  WNA+IS YAQ    + A  LF  M    VRPN +T+   LS C + GAL +GKWLH
Sbjct: 378 TMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLH 437

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
             I ++ LE +V + TAL+DMYAKCG ++ A R+F+    +++  WNAM+AGYG+HG G 
Sbjct: 438 RIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGA 497

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           EAL  + DM  + + P   TF+ +L ACSH GLV EG  VF  M     + P IEH  CM
Sbjct: 498 EALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCM 557

Query: 520 VDLLGRAGLLDEAHEMIKSMP---LRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
           VDLLGRAG L EA E+I   P   + P   VWGALL A  +HK+  + ++A+ ++ E++P
Sbjct: 558 VDLLGRAGQLKEAFELISEFPKSAVGPG--VWGALLGACMVHKDSDLAKLASQKLFELDP 615

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNW 636
           +N GY VL+SN++    ++++ A VR+  K  ++ K PG++ +E+    H F+ G   + 
Sbjct: 616 ENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHP 675

Query: 637 KS 638
           +S
Sbjct: 676 QS 677



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 222/429 (51%), Gaps = 11/429 (2%)

Query: 53  SSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNA 111
           S A+  +A M  +GS   D  T+ ++L A A+V    +G+ +H FA K GL    +V   
Sbjct: 193 SEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTG 252

Query: 112 LIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPS 171
           LI +YS+CG + SAR LFD M   D+V+++ +I GY   G+   ++ +  E+  + + P+
Sbjct: 253 LISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPN 312

Query: 172 EVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQL 231
              +++++ + +      L + +H  V+++         ++TA+  ++ +  ++  A++ 
Sbjct: 313 SSTLVALIPVHSPFGHDLLAQCLHGFVLKS--GFTANSPVSTAITTLHCRLNDMESARKA 370

Query: 232 FNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL 291
           F+ + + ++ SW  MISGY +       V LF +M++ NV P+ ITI S +  C  +G L
Sbjct: 371 FDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGAL 430

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
            LGKWLH  I     E ++ +  AL+DMY KC  I  AR +F+ M +K+V+ WNA+I+ Y
Sbjct: 431 SLGKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGY 490

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVD 410
                  +A +L+  M  + + P   T + +L  C+  G +E G K   +  +   +   
Sbjct: 491 GLHGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPG 550

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDI--CMWNAMMAGYGMHGCGEEA-----LI 463
           +   T +VD+  + G +  A+ L SE     +   +W A++    +H   + A      +
Sbjct: 551 IEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKL 610

Query: 464 FFVDMERSG 472
           F +D E SG
Sbjct: 611 FELDPENSG 619



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 171/323 (52%), Gaps = 15/323 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  YN+L++ Y  N    S++N++  +   G   ++ T+  ++   +      L + +HG
Sbjct: 278 LVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHG 337

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F +K+G   ++ VS A+  ++     + SAR  FD MP + + SW+ MI GY + GL E 
Sbjct: 338 FVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEKTMESWNAMISGYAQNGLTEM 397

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+ +  +M  +++RP+ + + S +S  A +  + LGK +H  +    +D +  V + TAL
Sbjct: 398 AVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITE--EDLEPNVYVMTAL 455

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           IDMY+KCG+++ A+++FN ++  +VVSW  MI+GY    +  E ++L+ +M++ ++ P+ 
Sbjct: 456 IDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGAEALKLYKDMLDAHLLPTS 515

Query: 276 ITILSLIIECGFVGGLQLGKW------LHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            T LS++  C   GGL    W         Y +  G E    M    VD+ G+  +++ A
Sbjct: 516 ATFLSVLYACSH-GGLVEEGWKVFRSMTDDYAINPGIEHCTCM----VDLLGRAGQLKEA 570

Query: 330 RTLFDGMKSKDV--MIWNAVISA 350
             L        V   +W A++ A
Sbjct: 571 FELISEFPKSAVGPGVWGALLGA 593



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 7/157 (4%)

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH      G   D  + +AL  +Y     V+ A ++F      D  +WN ++AG      
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLS---- 191

Query: 458 GEEALIFFVDMERSG-VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
           G EA+  F  M   G V+P+  T   +L A +    VT G+ V        GL       
Sbjct: 192 GSEAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCV-HSFAEKCGLAEHEHVL 250

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
             ++ L  + G ++ A  +   M  +P+++ + AL++
Sbjct: 251 TGLISLYSKCGDVESARCLFDMME-KPDLVAYNALIS 286


>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 974

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 201/585 (34%), Positives = 337/585 (57%), Gaps = 6/585 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  + +N      +  ++ M+++G + D FT  +I  ACA +   + G ++H   I
Sbjct: 378 WNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMI 437

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KN    + +V+NAL+ MY++ G+L  AR  F+ M   D VSW+ +I GY +    +EA  
Sbjct: 438 KNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFF 497

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R M    + P EV++ S+VS  A+V ++  G+  H  +V+   D        ++LIDM
Sbjct: 498 MFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTS--TCAGSSLIDM 555

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCG +  A+ +F  +   +VVS   +I+GY     + E + LF E+    + P+E+T 
Sbjct: 556 YVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTF 614

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN-ALVDMYGKCREIRSARTLFDGMK 337
             L+  C     L LG+ +H  +++ GF  S  M   +L+ +Y   +    + TLF  ++
Sbjct: 615 AGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQ 674

Query: 338 -SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             K +++W A+IS YAQ +  +KA + + HM+   + P++     +L  C    +L+ G+
Sbjct: 675 YPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQ 734

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD-ICMWNAMMAGYGMH 455
            +H+ I   G  +D +  ++L+DMYAKCGDV G+ ++F E   R+ +  WN+M+ G   +
Sbjct: 735 EIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKN 794

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  EEAL  F  ME+  + P+ +TF+G+L+ACSHAG V+EG+ VFD MV+   L P+++H
Sbjct: 795 GYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDH 854

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
            GCMVD+LGR G L+EA E I  +  + + ++W  LL A + H +   G+ AA +++E++
Sbjct: 855 LGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMELK 914

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
           PQ+    VL+S+IYA +  W+    +RR MK   VKK PG+S +E
Sbjct: 915 PQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWIE 959



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 280/529 (52%), Gaps = 11/529 (2%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +T I NP +  +N +++ + K      A++ +  ++K G +    ++ ++L A A + M 
Sbjct: 266 FTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSML 325

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
           + G  +H  A K GLD + YV +AL+ MY++C  + +A+ +F+ +  R++V W+ M+ G+
Sbjct: 326 NYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGF 385

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
            + GL +E +E    M+    +P E    S+ S  A +  ++ G  +H  +++N     L
Sbjct: 386 AQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNL 445

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            V  A AL+DMY+K G L  A++ F  +  +  VSW  +I GY++    +E   +F  M+
Sbjct: 446 FV--ANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMV 503

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
              V P E+++ S++  C  V  L+ G+  H  +++ G + S    ++L+DMY KC  + 
Sbjct: 504 SNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVL 563

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           +AR +F  M S++V+  NA+I+ Y   H +++A  LF  +++  ++P EVT  GLL  C 
Sbjct: 564 AARDVFYSMPSRNVVSVNALIAGYTMGH-LEEAIHLFQEIQMVGLKPTEVTFAGLLDGCD 622

Query: 388 EAGALEMGKWLHTYIEKQG-LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY-RDICMW 445
            A  L +G+ +H  + K G L    ++  +L+ +Y        +  LFSE  Y + + +W
Sbjct: 623 GAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVW 682

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
            A+++GY      E+AL F+  M    + P+   F  +L AC+    +  G+ +   + H
Sbjct: 683 TALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFH 742

Query: 506 GLGLVPKIEHYGC--MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
             G    ++   C  ++D+  + G +  + ++ + MP R N+I W +++
Sbjct: 743 -TGF--NMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMI 788



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 140/461 (30%), Positives = 236/461 (51%), Gaps = 38/461 (8%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+  Y+++  P  A+ ++  M++ G   D  T+ T++ A                  
Sbjct: 211 WTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNA------------------ 252

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
                            Y   G L  AR LF ++PN +VV+W+ MI G+ + G  EEA+ 
Sbjct: 253 -----------------YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAIS 295

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
              E++   ++ +  ++ S++S  A ++ ++ G  +HA   +   D+   V + +AL++M
Sbjct: 296 FFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDN--VYVGSALVNM 353

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KC  +  AKQ+FN L + ++V W  M+ G+ +     E +  F+ M      P E T 
Sbjct: 354 YAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTF 413

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S+   C  +  L  G  LH  +++N F  +L +ANALVDMY K   ++ AR  F+ MK 
Sbjct: 414 TSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKI 473

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D + WNA+I  Y Q    D+AF +F  M  + V P+EV++  ++S C     L+ G+  
Sbjct: 474 HDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQC 533

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + K GL+      ++L+DMY KCG V  A  +F     R++   NA++AGY M G  
Sbjct: 534 HCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHL 592

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           EEA+  F +++  G+KP  +TF GLL+ C  A ++  G+ +
Sbjct: 593 EEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQI 633



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 138/548 (25%), Positives = 262/548 (47%), Gaps = 40/548 (7%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++ Y+ +   ++ +  +  M  +    + FT   +L AC+ +   + G+++H    
Sbjct: 110 WNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVF 169

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G    ++    LI MY++C  L  AR +FD   N D VSW+ +I GY R G P EA++
Sbjct: 170 KTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVK 229

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V   M+ +   P ++ ++++V                                     + 
Sbjct: 230 VFDRMQRVGHAPDQITLVTVV-------------------------------------NA 252

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y   G LA A++LF ++   +VV+W VMISG+ +     E +  F E+ +  +  +  ++
Sbjct: 253 YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++     +  L  G  +HA   + G + ++ + +ALV+MY KC ++ +A+ +F+ +  
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +++++WNA++  +AQ     +  E F  MK    +P+E T   + S C     L  G  L
Sbjct: 373 RNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQL 432

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           HT + K     ++ +  ALVDMYAK G +  A + F      D   WNA++ GY      
Sbjct: 433 HTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYN 492

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +EA   F  M  +GV P+ ++   +++AC++   +  G+     +V  +GL         
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVK-VGLDTSTCAGSS 551

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL-HKNPSMGEIAATQILEIEPQ 577
           ++D+  + G++  A ++  SMP R N++   AL+A   + H   ++      Q++ ++P 
Sbjct: 552 LIDMYVKCGVVLAARDVFYSMPSR-NVVSVNALIAGYTMGHLEEAIHLFQEIQMVGLKPT 610

Query: 578 NYGYNVLM 585
              +  L+
Sbjct: 611 EVTFAGLL 618



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 226/478 (47%), Gaps = 49/478 (10%)

Query: 79  KACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVV 138
           K   Q L T   K IH  ++K G+     + N ++ +Y +CG++  A+  F  +  +DV 
Sbjct: 51  KPVLQALST--AKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVF 108

Query: 139 SWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACV 198
           +W++++  Y   GL    ++    M   ++RP+E     ++S  + + DV+ G+ +H   
Sbjct: 109 AWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVH--- 165

Query: 199 VRNCKDEKLGVAIAT----ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
              C   K G    +     LIDMY+KC  L  A+ +F+       VSWT +I+GY+R  
Sbjct: 166 ---CGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDG 222

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
              E V++F  M      P +IT+++                                  
Sbjct: 223 FPMEAVKVFDRMQRVGHAPDQITLVT---------------------------------- 248

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
            +V+ Y     +  AR LF  + + +V+ WN +IS +A+    ++A   F+ +K + ++ 
Sbjct: 249 -VVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKA 307

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
              ++  +LS       L  G  +H    K+GL+ +V + +ALV+MYAKC  ++ A ++F
Sbjct: 308 TRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVF 367

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
           +    R+I +WNAM+ G+  +G  +E + FF  M+R G +P+  TF  + +AC+    + 
Sbjct: 368 NSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLN 427

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
            G  +   M+        +     +VD+  ++G L EA +  + M +  N + W A++
Sbjct: 428 FGGQLHTVMIKN-KFASNLFVANALVDMYAKSGALKEARKQFELMKIHDN-VSWNAII 483



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 173/367 (47%), Gaps = 41/367 (11%)

Query: 192 KAIHACVVRNCKDEKLGVAI----ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           +A+    V + K  K+GV +       ++D+Y KCGN+ +A++ F+RL +  V +W  ++
Sbjct: 55  QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           S Y+        V+ F  M    V P+E T   ++  C  +  +  G+ +H  + + GF 
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
           F       L+DMY KCR +R AR +FDG  + D + W A+I+ Y +     +A ++F  M
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           +     P+++T+V                                    +V+ Y   G +
Sbjct: 235 QRVGHAPDQITLV-----------------------------------TVVNAYVALGRL 259

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             A +LF++    ++  WN M++G+   G  EEA+ FF++++++G+K    +   +L+A 
Sbjct: 260 ADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAI 319

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           +   ++  G  V  +     GL   +     +V++  +   +D A ++  S+  R N+++
Sbjct: 320 ASLSMLNYGSMVHAQATKE-GLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGER-NIVL 377

Query: 548 WGALLAA 554
           W A+L  
Sbjct: 378 WNAMLGG 384



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 3/244 (1%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           FS       L  + +L++ Y + N    AL  Y  MR +    D     ++L+ACA +  
Sbjct: 670 FSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSS 729

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR-DVVSWSTMIR 145
              G+EIH      G + D    ++LI MY++CG +  +  +F EMP R +V+SW++MI 
Sbjct: 730 LQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIV 789

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           G  + G  EEALE+ ++M    I P EV  + ++S  +    V  G+ +   +V N K +
Sbjct: 790 GLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQ 849

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFA 264
              V     ++D+  + G L  A++  N+L  +   + W+ ++    +  +   G R   
Sbjct: 850 PR-VDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAAD 908

Query: 265 EMIE 268
           +++E
Sbjct: 909 KLME 912


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 192/558 (34%), Positives = 329/558 (58%), Gaps = 5/558 (0%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNA-LIQMYSECGSLVSARYLFDEMPNR 135
           +L+AC Q     +G+ +H     +    + +V N  +I MYS CGS   +R +FD++  +
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           ++  W+ ++  Y R  L E+A+ +  E+    + +P    +  ++   A + D+ LG+ I
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQII 230

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYA-KQLFNRLNQNSVVSWTVMISGYIRC 253
           H    +   D    V +  ALI MY KCG +  A K++F+ ++  +V SW  ++ GY + 
Sbjct: 231 HGMATK--MDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQN 288

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
           ++  + + L+ +M +  + P   TI SL++ C  +  L  G+ +H + LRNG      + 
Sbjct: 289 SDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIG 348

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
            +L+ +Y  C +  +A+ LFDGM+ + ++ WN +I+ Y+Q    D+A  LF  M    ++
Sbjct: 349 ISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQ 408

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           P E+ ++ +   C++  AL +GK LH +  K  L  D+ + ++++DMYAK G +  + R+
Sbjct: 409 PYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRI 468

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F     +D+  WN ++AGYG+HG G+EAL  F  M R G+KP+  TF G+L ACSHAGLV
Sbjct: 469 FDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLV 528

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            +G   F++M++   + PK+EHY C+VD+LGRAG +D+A  +I+ MP  P+  +W +LL+
Sbjct: 529 EDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLS 588

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           + ++H N  +GE  A ++LE+EP+     VL+SN++A + +W+DV  VR  MK+I ++K+
Sbjct: 589 SCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKD 648

Query: 614 PGFSSVEVNGLVHKFIRG 631
            G S +EV G VH F+ G
Sbjct: 649 AGCSWIEVGGKVHNFLIG 666



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 247/464 (53%), Gaps = 19/464 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYA-FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           L ++N++V++Y +N     A++I++  +     + DNFT+P ++KACA +L   LG+ IH
Sbjct: 172 LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIH 231

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSA-RYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           G A K  L  D +V NALI MY +CG +  A + +FD M  + V SW+ ++ GY +   P
Sbjct: 232 GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNSDP 291

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA--- 210
            +AL++  +M    + P    + S++   + +  +  G+ IH   +RN      G+A   
Sbjct: 292 RKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRN------GLAVDP 345

Query: 211 -IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            I  +L+ +Y  CG    A+ LF+ +   S+VSW VMI+GY +    +E + LF +M+ +
Sbjct: 346 FIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSD 405

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            + P EI I+ +   C  +  L+LGK LH + L+      + ++++++DMY K   I  +
Sbjct: 406 GIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLS 465

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           + +FD ++ KDV  WN +I+ Y       +A ELF  M    ++P++ T  G+L  C+ A
Sbjct: 466 QRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHA 525

Query: 390 GALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI-YRDICMWNA 447
           G +E G ++ +  +    +E  +   T +VDM  + G ++ A RL  E     D  +W++
Sbjct: 526 GLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSS 585

Query: 448 MMAGYGMH---GCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
           +++   +H   G GE+     +++E    KP     I  L A S
Sbjct: 586 LLSSCRIHGNLGLGEKVANKLLELEPE--KPENYVLISNLFAGS 627


>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 599

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/542 (35%), Positives = 318/542 (58%), Gaps = 6/542 (1%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           K+IH  +I + L    ++   +I  +     L  A  +F++    D   ++ MIR Y   
Sbjct: 23  KQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQEPDGFIYNAMIRAYSSS 82

Query: 151 GLPEEALEVMREMRF-MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
             P  A+ +  +MR   +I   +     +    A    V+ GK +H  +VR     +L  
Sbjct: 83  QTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVR--IGYELDG 140

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE- 268
            + ++L++ Y  CG +  A+Q+F+  +   VV W  +I+GY R   + +   +F EM+E 
Sbjct: 141 FLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEV 200

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIR 327
           + V P+E T++ LI+ C     L+LG+ +H Y++++      + +  AL+++Y KC  + 
Sbjct: 201 KEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLD 260

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            AR LFD +  K+ ++WN++I  Y Q   +++  EL   M +S ++P+  T+ G+LS C 
Sbjct: 261 GARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACA 320

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
           + GA  +G W+H + EK+G+  DV + TAL+DMYAKCG +  A ++F +   R++  WNA
Sbjct: 321 QMGAFNLGNWVHRFAEKKGI-WDVFIGTALIDMYAKCGFIGAARKVFDQMNERNVATWNA 379

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           +++GY  HG  E A+  F +M  SG +P+ ITF+ +L+AC+H+GLV  GK  FD M+   
Sbjct: 380 ILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLMLQYY 439

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
            + P++EHYGCMVDLLGRAGLL EA E+IK M + PN++VWGALL+A  +H N  +GE A
Sbjct: 440 KIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGNIEIGEWA 499

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHK 627
           A  ++++   + G  V+++N+YA A R+N V  VR +M E  + K  G S +E+  +VH+
Sbjct: 500 AHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKGICKSHGCSMIEIGDVVHE 559

Query: 628 FI 629
           F+
Sbjct: 560 FV 561



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 160/566 (28%), Positives = 284/566 (50%), Gaps = 46/566 (8%)

Query: 9   NLEQTRQCHAHII---KTHFKFSYTNIINPLTR---------------------YNSLVT 44
           N++Q +Q HA  I    ++ +F  T IIN                         YN+++ 
Sbjct: 18  NIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQEPDGFIYNAMIR 77

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD 103
           +Y  +  P  A++IY  MR   + + D +T P + KACA       GKE+HG  ++ G +
Sbjct: 78  AYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVHGVIVRIGYE 137

Query: 104 GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
            D ++ ++L+  Y  CG + +A+ +FDE   +DVV W+ +I GY R G+  ++  V +EM
Sbjct: 138 LDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEM 197

Query: 164 -RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC 222
               ++RP+E  M+ ++    +  ++ LG+AIH  ++++    + GV +  ALI++Y KC
Sbjct: 198 VEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLRE-GVKLEAALINLYVKC 256

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI 282
           G L  A++LF+ + + + V W  +I GY +   +NE + L  EM   N+ P   T+  ++
Sbjct: 257 GYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVL 316

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
             C  +G   LG W+H +  + G  + + +  AL+DMY KC  I +AR +FD M  ++V 
Sbjct: 317 SACAQMGAFNLGNWVHRFAEKKGI-WDVFIGTALIDMYAKCGFIGAARKVFDQMNERNVA 375

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-WLHTY 401
            WNA++S YA     + A ELF  M+ S  RP+ +T + +L  C  +G +E GK +    
Sbjct: 376 TWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVENGKQYFDLM 435

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHG---C 457
           ++   +   V     +VD+  + G +  A  L    +   ++ +W A+++   +HG    
Sbjct: 436 LQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSACSIHGNIEI 495

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           GE A    + +       +G +++ L N  + A      K+V + MV   G+    + +G
Sbjct: 496 GEWAAHHMIKLN----AMDGGSYVILANLYASAQRFNRVKAVREMMVEK-GIC---KSHG 547

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRP 543
           C +  +G     D  HE + +  + P
Sbjct: 548 CSMIEIG-----DVVHEFVVADKMHP 568


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/593 (32%), Positives = 326/593 (54%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L++ + +      AL I+  M+ +G   D+ TI ++L AC+ V     GK++H + +
Sbjct: 212 FNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLL 271

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+  D  +  +L+ +Y + G +  A  +FD     +VV W+ M+  Y +     ++ +
Sbjct: 272 KAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFD 331

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M    +RP++     M+       ++ LG+ IH+  ++N     +   ++  LIDM
Sbjct: 332 IFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDM--YVSGVLIDM 389

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSK G L  A+++ + + +  VVSWT MI+GY++     E +  F EM    ++P  I +
Sbjct: 390 YSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGL 449

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S I  C  +  +  G  +HA +  +G+   +++ N LV +Y +C   + A + F+ ++ 
Sbjct: 450 ASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEH 509

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K+ + WN +IS +AQ+   ++A ++F+ M  +  + N  T V  +S       ++ GK +
Sbjct: 510 KEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQI 569

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + K G   +  +  AL+ +Y KCG +  A   F E   R+   WN ++     HG G
Sbjct: 570 HARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRG 629

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F  M++ G+KP+ +TF+G+L ACSH GLV EG   F  M +  G+ P+ +HY C
Sbjct: 630 LEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYAC 689

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VD+LGRAG LD A   ++ MP+  + +VW  LL+A K+HKN  +GE AA  +LE+EP +
Sbjct: 690 VVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHD 749

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VL+SN YAV  +W     +R++MK+  V+KEPG S +EV  +VH F  G
Sbjct: 750 SASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVG 802



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 160/558 (28%), Positives = 276/558 (49%), Gaps = 10/558 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC-AQVLMTHLGKEIHGFA 97
           +N  +  ++  + P   L ++A   +    +        L+AC        L  EIH  A
Sbjct: 9   FNRPLAGFLAPDDPEKLLPLFAAKCRQYMVLGAVDFACALRACRGSGRRWPLVPEIHAKA 68

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           I  GL G   + N LI +Y++ G +  AR +F+E+  RD VSW  ++ GY + GL EEA+
Sbjct: 69  IICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAV 128

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            + REM    + P+   + S++S         LG+ IH  V +     +    +  ALI 
Sbjct: 129 RLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSE--TFVGNALIS 186

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           +Y +C +   A ++F  +     V++  +ISG+ +C   +  + +F EM    + P  +T
Sbjct: 187 LYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVT 246

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           I SL+  C  VG L+ GK LH+Y+L+ G      M  +L+D+Y K  +I  A  +FD   
Sbjct: 247 IASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGD 306

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
             +V++WN ++ AY Q   + K+F++F  M  + VRPN+ T   +L  CT  G + +G+ 
Sbjct: 307 RTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQ 366

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H+   K G + D+ +   L+DMY+K G ++ A R+      +D+  W +M+AGY  H  
Sbjct: 367 IHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEF 426

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            +EAL  F +M+  G+ P+ I     ++AC+    V +G  +  + V+  G    +  + 
Sbjct: 427 CKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHAR-VYVSGYSADVSIWN 485

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
            +V L  R G+  EA    +++  +   I W  L++         + E A    ++++  
Sbjct: 486 GLVYLYARCGISKEAFSSFEAIEHKEG-ITWNGLISG---FAQSGLYEEALKVFMKMDQA 541

Query: 578 NYGYNV--LMSNIYAVAN 593
              YNV   +S+I A AN
Sbjct: 542 GAKYNVFTFVSSISASAN 559



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 267/518 (51%), Gaps = 4/518 (0%)

Query: 41  SLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
           ++++ Y +N     A+ +Y  M ++G     + + +IL AC +  +  LG+ IH    K 
Sbjct: 113 AVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQ 172

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G   + +V NALI +Y  C S   A  +F +M   D V+++T+I G+ + G  + AL + 
Sbjct: 173 GFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIF 232

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
            EM+   + P  V + S+++  + V D+  GK +H+ +++      L   +  +L+D+Y 
Sbjct: 233 DEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLK--AGMSLDYIMEGSLLDLYV 290

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           K G++  A Q+F+  ++ +VV W +M+  Y + +++ +   +F  M+   V P++ T   
Sbjct: 291 KSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPC 350

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           ++  C   G + LG+ +H+  ++NGF+  + ++  L+DMY K   +  A+ + D ++ KD
Sbjct: 351 MLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKD 410

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           V+ W ++I+ Y Q     +A E F  M+   + P+ + +   +S C    A+  G  +H 
Sbjct: 411 VVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHA 470

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
            +   G   DV +   LV +YA+CG    A+  F    +++   WN +++G+   G  EE
Sbjct: 471 RVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEE 530

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           AL  F+ M+++G K N  TF+  ++A ++   + +GK +  +++   G   + E    ++
Sbjct: 531 ALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIK-TGYTSETEISNALI 589

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            L G+ G +++A      M  R N + W  ++     H
Sbjct: 590 SLYGKCGSIEDAKMDFFEMTKR-NEVSWNTIITCCSQH 626



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 219/430 (50%), Gaps = 19/430 (4%)

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           I   LID+Y+K G +  A+++F  L+    VSW  ++SGY +     E VRL+ EM    
Sbjct: 79  IGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSG 138

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           V P+   + S++  C      QLG+ +H  + + GF     + NAL+ +Y +CR  R A 
Sbjct: 139 VVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLAD 198

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +F  M   D + +N +IS +AQ    D+A  +F  M++S + P+ VT+  LL+ C+  G
Sbjct: 199 RVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVG 258

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
            L  GK LH+Y+ K G+ +D I++ +L+D+Y K GD+  A ++F      ++ +WN M+ 
Sbjct: 259 DLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLV 318

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
            YG      ++   F  M  +GV+PN  T+  +L  C+H G +  G+ +    +   G  
Sbjct: 319 AYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKN-GFQ 377

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK--NPSMGEIAA 568
             +   G ++D+  + G LD+A  ++  M    +++ W +++A    H+    ++     
Sbjct: 378 SDMYVSGVLIDMYSKYGWLDKAQRIL-DMIEEKDVVSWTSMIAGYVQHEFCKEALETFKE 436

Query: 569 TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE---PGFSS-VEV-NG 623
            Q   I P N G   L S I A        AG++ V +  ++       G+S+ V + NG
Sbjct: 437 MQACGIWPDNIG---LASAISA-------CAGIKAVHQGSQIHARVYVSGYSADVSIWNG 486

Query: 624 LVHKFIRGGM 633
           LV+ + R G+
Sbjct: 487 LVYLYARCGI 496


>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g09040, mitochondrial-like [Cucumis sativus]
          Length = 1441

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 201/585 (34%), Positives = 338/585 (57%), Gaps = 6/585 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  + +N      +  ++ M+++G + D FT  +I  ACA +   + G ++H   I
Sbjct: 378 WNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMI 437

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KN    + +V+NAL+ MY++ G+L  AR  F+ M   D VSW+ +I GY +    +EA  
Sbjct: 438 KNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFF 497

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R M    + P EV++ S+VS  A+V ++  G+  H  +V+   D        ++LIDM
Sbjct: 498 MFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTS--TCAGSSLIDM 555

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCG +  A+ +F  +   +VVS   +I+GY     + E + LF E+    + P+E+T 
Sbjct: 556 YVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKPTEVTF 614

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN-ALVDMYGKCREIRSARTLFDGMK 337
             L+  C     L LG+ +H  +++ GF  S  M   +L+ +Y   +    + TLF  ++
Sbjct: 615 AGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQ 674

Query: 338 -SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             K +++W A+IS YAQ +  +KA + + HM+   + P++     +L  C    +L+ G+
Sbjct: 675 YPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQ 734

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD-ICMWNAMMAGYGMH 455
            +H+ I   G  +D +  ++L+DMYAKCGDV G+ ++F E   R+ +  WN+M+ G   +
Sbjct: 735 EIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIVGLAKN 794

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  EEAL  F  ME+  + P+ +TF+G+L+ACSHAG V+EG+ VFD MV+   L+P+++H
Sbjct: 795 GYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLLPRVDH 854

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
            GCMVD+LGR G L+EA E I  +  + + ++W  LL A + H +   G+ AA +++E++
Sbjct: 855 LGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAADKLMELK 914

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
           PQ+    VL+S+IYA +  W+    +RR MK   VKK PG+S +E
Sbjct: 915 PQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWIE 959



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 280/529 (52%), Gaps = 11/529 (2%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +T I NP +  +N +++ + K      A++ +  ++K G +    ++ ++L A A + M 
Sbjct: 266 FTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSML 325

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
           + G  +H  A K GLD + YV +AL+ MY++C  + +A+ +F+ +  R++V W+ M+ G+
Sbjct: 326 NYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGF 385

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
            + GL +E +E    M+    +P E    S+ S  A +  ++ G  +H  +++N     L
Sbjct: 386 AQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNL 445

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            V  A AL+DMY+K G L  A++ F  +  +  VSW  +I GY++    +E   +F  M+
Sbjct: 446 FV--ANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMV 503

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
              V P E+++ S++  C  V  L+ G+  H  +++ G + S    ++L+DMY KC  + 
Sbjct: 504 SNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVL 563

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           +AR +F  M S++V+  NA+I+ Y   H +++A  LF  +++  ++P EVT  GLL  C 
Sbjct: 564 AARDVFYSMPSRNVVSVNALIAGYTMGH-LEEAIHLFQEIQMVGLKPTEVTFAGLLDGCD 622

Query: 388 EAGALEMGKWLHTYIEKQG-LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY-RDICMW 445
            A  L +G+ +H  + K G L    ++  +L+ +Y        +  LFSE  Y + + +W
Sbjct: 623 GAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVW 682

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
            A+++GY      E+AL F+  M    + P+   F  +L AC+    +  G+ +   + H
Sbjct: 683 TALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHSLIFH 742

Query: 506 GLGLVPKIEHYGC--MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
             G    ++   C  ++D+  + G +  + ++ + MP R N+I W +++
Sbjct: 743 -TGF--NMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMI 788



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 150/519 (28%), Positives = 252/519 (48%), Gaps = 62/519 (11%)

Query: 5   NGFLNLEQTRQCHAHIIKTHFKFS-----------------------YTNIINPLT-RYN 40
           +G  ++   RQ H  + KT F F                        +   +N  T  + 
Sbjct: 153 SGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWT 212

Query: 41  SLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
           +L+  Y+++  P  A+ ++  M++ G   D  T+ T++ A                    
Sbjct: 213 ALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTVVNA-------------------- 252

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
                          Y   G L  AR LF ++PN +VV+W+ MI G+ + G  EEA+   
Sbjct: 253 ---------------YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFF 297

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
            E++   ++ +  ++ S++S  A ++ ++ G  +HA   +   D+   V + +AL++MY+
Sbjct: 298 LELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDN--VYVGSALVNMYA 355

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           KC  +  AKQ+FN L + ++V W  M+ G+ +     E +  F+ M      P E T  S
Sbjct: 356 KCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTS 415

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           +   C  +  L  G  LH  +++N F  +L +ANALVDMY K   ++ AR  F+ MK  D
Sbjct: 416 IFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHD 475

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
            + WNA+I  Y Q    D+AF +F  M  + V P+EV++  ++S C     L+ G+  H 
Sbjct: 476 NVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHC 535

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
            + K GL+      ++L+DMY KCG V  A  +F     R++   NA++AGY M G  EE
Sbjct: 536 LLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEE 594

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           A+  F +++  G+KP  +TF GLL+ C  A ++  G+ +
Sbjct: 595 AIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQI 633



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 138/548 (25%), Positives = 262/548 (47%), Gaps = 40/548 (7%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++ Y+ +   ++ +  +  M  +    + FT   +L AC+ +   + G+++H    
Sbjct: 110 WNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVF 169

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G    ++    LI MY++C  L  AR +FD   N D VSW+ +I GY R G P EA++
Sbjct: 170 KTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVK 229

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V   M+ +   P ++ ++++V                                     + 
Sbjct: 230 VFDRMQRVGHAPDQITLVTVV-------------------------------------NA 252

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y   G LA A++LF ++   +VV+W VMISG+ +     E +  F E+ +  +  +  ++
Sbjct: 253 YVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSL 312

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++     +  L  G  +HA   + G + ++ + +ALV+MY KC ++ +A+ +F+ +  
Sbjct: 313 GSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGE 372

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +++++WNA++  +AQ     +  E F  MK    +P+E T   + S C     L  G  L
Sbjct: 373 RNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQL 432

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           HT + K     ++ +  ALVDMYAK G +  A + F      D   WNA++ GY      
Sbjct: 433 HTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYN 492

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +EA   F  M  +GV P+ ++   +++AC++   +  G+     +V  +GL         
Sbjct: 493 DEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVK-VGLDTSTCAGSS 551

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL-HKNPSMGEIAATQILEIEPQ 577
           ++D+  + G++  A ++  SMP R N++   AL+A   + H   ++      Q++ ++P 
Sbjct: 552 LIDMYVKCGVVLAARDVFYSMPSR-NVVSVNALIAGYTMGHLEEAIHLFQEIQMVGLKPT 610

Query: 578 NYGYNVLM 585
              +  L+
Sbjct: 611 EVTFAGLL 618



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 226/478 (47%), Gaps = 49/478 (10%)

Query: 79  KACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVV 138
           K   Q L T   K IH  ++K G+     + N ++ +Y +CG++  A+  F  +  +DV 
Sbjct: 51  KPVLQALST--AKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVF 108

Query: 139 SWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACV 198
           +W++++  Y   GL    ++    M   ++RP+E     ++S  + + DV+ G+ +H   
Sbjct: 109 AWNSVLSMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVH--- 165

Query: 199 VRNCKDEKLGVAIAT----ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
              C   K G    +     LIDMY+KC  L  A+ +F+       VSWT +I+GY+R  
Sbjct: 166 ---CGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDG 222

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
              E V++F  M      P +IT+++                                  
Sbjct: 223 FPMEAVKVFDRMQRVGHAPDQITLVT---------------------------------- 248

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
            +V+ Y     +  AR LF  + + +V+ WN +IS +A+    ++A   F+ +K + ++ 
Sbjct: 249 -VVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKA 307

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
              ++  +LS       L  G  +H    K+GL+ +V + +ALV+MYAKC  ++ A ++F
Sbjct: 308 TRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVF 367

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
           +    R+I +WNAM+ G+  +G  +E + FF  M+R G +P+  TF  + +AC+    + 
Sbjct: 368 NSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLN 427

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
            G  +   M+        +     +VD+  ++G L EA +  + M +  N + W A++
Sbjct: 428 FGGQLHTVMIKN-KFASNLFVANALVDMYAKSGALKEARKQFELMKIHDN-VSWNAII 483



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 173/367 (47%), Gaps = 41/367 (11%)

Query: 192 KAIHACVVRNCKDEKLGVAI----ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           +A+    V + K  K+GV +       ++D+Y KCGN+ +A++ F+RL +  V +W  ++
Sbjct: 55  QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           S Y+        V+ F  M    V P+E T   ++  C  +  +  G+ +H  + + GF 
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
           F       L+DMY KCR +R AR +FDG  + D + W A+I+ Y +     +A ++F  M
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           +     P+++T+V                                    +V+ Y   G +
Sbjct: 235 QRVGHAPDQITLV-----------------------------------TVVNAYVALGRL 259

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             A +LF++    ++  WN M++G+   G  EEA+ FF++++++G+K    +   +L+A 
Sbjct: 260 ADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAI 319

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           +   ++  G  V  +     GL   +     +V++  +   +D A ++  S+  R N+++
Sbjct: 320 ASLSMLNYGSMVHAQATKE-GLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGER-NIVL 377

Query: 548 WGALLAA 554
           W A+L  
Sbjct: 378 WNAMLGG 384



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 120/248 (48%), Gaps = 11/248 (4%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           FS       L  + +L++ Y + N    AL  Y  MR +    D     ++L+ACA +  
Sbjct: 670 FSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSS 729

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR-DVVSWSTMIR 145
              G+EIH      G + D    ++LI MY++CG +  +  +F EMP R +V+SW++MI 
Sbjct: 730 LQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWNSMIV 789

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK-- 203
           G  + G  EEALE+ ++M    I P EV  + ++S  +    V  G+ +   +V N K  
Sbjct: 790 GLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLL 849

Query: 204 --DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGV 260
              + LG      ++D+  + G L  A++  N+L  +   + W+ ++    +  +   G 
Sbjct: 850 PRVDHLG-----CMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGK 904

Query: 261 RLFAEMIE 268
           R   +++E
Sbjct: 905 RAADKLME 912


>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g69350, mitochondrial-like
           [Cucumis sativus]
          Length = 804

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/584 (33%), Positives = 326/584 (55%), Gaps = 3/584 (0%)

Query: 48  KNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAY 107
           +N + +  L+ +  M   G   D+  + T+++AC ++ +  L K  HG+ +K G++ D +
Sbjct: 177 ENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRF 236

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           V ++LI MY++CGSL SA  +F+ +  R   +W+ MI  Y+ GG  +EAL +   M+  +
Sbjct: 237 VDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTE 296

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
           + P+ V M  ++    +++ +  GK++H  V++N  D  L   +   L+++Y+       
Sbjct: 297 VEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLD-CLGPTLLELYAATAKHDL 355

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
            +++ + +    +  W  +IS Y +   + E V LF  M ++   P   ++ S +   G 
Sbjct: 356 CEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGN 415

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
            G LQLG  +H ++++  F     + N+L++MY KC  +  A  +FD M+ K V+ WN++
Sbjct: 416 EGELQLGLQIHGHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSM 474

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           IS  +Q     KA  LF  M V+     EV  V ++  C+  G LE GKW+H  +   G+
Sbjct: 475 ISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGV 534

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
              + ++TALVDMYAKCGD+  A R+F     R +  W+++++ YG+HG   E +  F  
Sbjct: 535 RKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSK 594

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           M  SG+KPN +T + +L+ACSHAG V EG   F+ M    G+ PK EH+ C+VDLL RAG
Sbjct: 595 MLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSM-RDFGIEPKREHFVCIVDLLSRAG 653

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSN 587
            LDEA+E+IK MP  P   +WGALL   ++H+   + +    ++  I+  + G+  L+SN
Sbjct: 654 DLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLSN 713

Query: 588 IYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           IYA    WN+   VR +MK   +KK P +S VE+    ++F  G
Sbjct: 714 IYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRFGAG 757



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/598 (26%), Positives = 300/598 (50%), Gaps = 34/598 (5%)

Query: 9   NLEQTRQCHAHIIKTHF---KFSYTNIINPLTR---------------------YNSLVT 44
            L Q  Q HAHII T         T +I   ++                     +  L+ 
Sbjct: 13  TLRQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSPDSFMWGVLLK 72

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
           S++ N     A+++Y  M     + +++T P++L+AC+      +G+ +HG  IK+G D 
Sbjct: 73  SHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSGFDM 132

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           D  V+ AL+ +Y E G L SAR +F EMP RD+VSWS++I      G   E L+  R M 
Sbjct: 133 DPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFRCMV 192

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV-RNCKDEKLGVAIATALIDMYSKCG 223
                P  V ++++V    ++  + L K+ H  ++ R  ++++    + ++LI MY+KCG
Sbjct: 193 SEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRF---VDSSLIFMYAKCG 249

Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLII 283
           +L  A+ +F  +   S  +WT MIS Y     + E + LF  M +  V P+ +T+  ++ 
Sbjct: 250 SLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRIILR 309

Query: 284 ECGFVGGLQLGKWLHAYILRNGFEFSL-AMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
            C  +  L+ GK +H  +++N  + +L  +   L+++Y    +      +   +  + + 
Sbjct: 310 SCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGRGIA 369

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
           +WN +IS YAQ   + +  +LF+ M+     P+  ++   LS     G L++G  +H ++
Sbjct: 370 VWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIHGHV 429

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
            K+   +D  +  +L++MY+KCG V+ AY +F +   + +  WN+M++G   +G   +A+
Sbjct: 430 IKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAI 488

Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDL 522
             F  M  +  +   + F+ ++ ACSH G + +GK +  K++   G+   I     +VD+
Sbjct: 489 SLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLI-TCGVRKCIFIETALVDM 547

Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQN 578
             + G L  A  +  +M  R +++ W +L+++  +H   S      +++LE  I+P +
Sbjct: 548 YAKCGDLQTAQRVFDNMSER-SVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPND 604


>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial-like [Cucumis sativus]
          Length = 804

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/584 (33%), Positives = 326/584 (55%), Gaps = 3/584 (0%)

Query: 48  KNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAY 107
           +N + +  L+ +  M   G   D+  + T+++AC ++ +  L K  HG+ +K G++ D +
Sbjct: 177 ENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRF 236

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           V ++LI MY++CGSL SA  +F+ +  R   +W+ MI  Y+ GG  +EAL +   M+  +
Sbjct: 237 VDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTE 296

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
           + P+ V M  ++    +++ +  GK++H  V++N  D  L   +   L+++Y+       
Sbjct: 297 VEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLD-CLGPTLLELYAATAKHDL 355

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
            +++ + +    +  W  +IS Y +   + E V LF  M ++   P   ++ S +   G 
Sbjct: 356 CEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGN 415

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
            G LQLG  +H ++++  F     + N+L++MY KC  +  A  +FD M+ K V+ WN++
Sbjct: 416 EGELQLGLQIHGHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSM 474

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           IS  +Q     KA  LF  M V+     EV  V ++  C+  G LE GKW+H  +   G+
Sbjct: 475 ISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLITCGV 534

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
              + ++TALVDMYAKCGD+  A R+F     R +  W+++++ YG+HG   E +  F  
Sbjct: 535 RKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSSLISSYGVHGQISEVIFLFSK 594

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           M  SG+KPN +T + +L+ACSHAG V EG   F+ M    G+ PK EH+ C+VDLL RAG
Sbjct: 595 MLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSM-RDFGIEPKREHFVCIVDLLSRAG 653

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSN 587
            LDEA+E+IK MP  P   +WGALL   ++H+   + +    ++  I+  + G+  L+SN
Sbjct: 654 DLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNIQRELWNIQTDDTGHYTLLSN 713

Query: 588 IYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           IYA    WN+   VR +MK   +KK P +S VE+    ++F  G
Sbjct: 714 IYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVVELGKKAYRFGAG 757



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 148/541 (27%), Positives = 285/541 (52%), Gaps = 10/541 (1%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           L+ S++ N     A+++Y  M     + +++T P++L+AC+      +G+ +HG  IK+G
Sbjct: 70  LLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVHGRIIKSG 129

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
            D D  V+ AL+ +Y E G L SAR +F EMP RD+VSWS++I      G   E L+  R
Sbjct: 130 FDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEINEGLDAFR 189

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV-RNCKDEKLGVAIATALIDMYS 220
            M      P  V ++++V    ++  + L K+ H  ++ R  ++++    + ++LI MY+
Sbjct: 190 CMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRF---VDSSLIFMYA 246

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           KCG+L  A+ +F  +   S  +WT MIS Y     + E + LF  M +  V P+ +T+  
Sbjct: 247 KCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTEVEPNSVTMRI 306

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSL-AMANALVDMYGKCREIRSARTLFDGMKSK 339
           ++  C  +  L+ GK +H  +++N  + +L  +   L+++Y    +      +   +  +
Sbjct: 307 ILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKILHEIGGR 366

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
            + +WN +IS YAQ   + +  +LF+ M+     P+  ++   LS     G L++G  +H
Sbjct: 367 GIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNEGELQLGLQIH 426

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
            ++ K+   +D  +  +L++MY+KCG V+ AY +F +   + +  WN+M++G   +G   
Sbjct: 427 GHVIKRPF-MDEYVFNSLINMYSKCGYVDLAYMIFDQMEPKGVVTWNSMISGLSQNGYST 485

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           +A+  F  M  +  +   + F+ ++ ACSH G + +GK +  K++   G+   I     +
Sbjct: 486 KAISLFDLMYVTCPEIGEVAFVSVIQACSHLGFLEKGKWIHHKLI-TCGVRKCIFIETAL 544

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQ 577
           VD+  + G L  A  +  +M  R +++ W +L+++  +H   S      +++LE  I+P 
Sbjct: 545 VDMYAKCGDLQTAQRVFDNMSER-SVVSWSSLISSYGVHGQISEVIFLFSKMLESGIKPN 603

Query: 578 N 578
           +
Sbjct: 604 D 604



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 133/522 (25%), Positives = 251/522 (48%), Gaps = 38/522 (7%)

Query: 72  FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE 131
           F   T L+  AQ         +H   I   L  D   S  LI+ YS+ G L S+  +F  
Sbjct: 8   FKASTTLRTLAQ---------LHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRT 58

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
             + D   W  +++ +   G  +EA+ +  +M    I+ +     S++   +   D+ +G
Sbjct: 59  FHSPDSFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVG 118

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           + +H  ++++  D  +   + TAL+ +Y + G L  A+++F  +    +VSW+ +IS  +
Sbjct: 119 QRVHGRIIKSGFD--MDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVV 176

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
              EINEG+  F  M+ E   P  + +L+++  CG +G L+L K  H YIL+ G E    
Sbjct: 177 ENGEINEGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRF 236

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           + ++L+ MY KC  +RSA  +F+ +  +    W A+IS+Y     + +A  LF+ M+ ++
Sbjct: 237 VDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALFVSMQKTE 296

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV-ILKTALVDMYAKCGDVNGA 430
           V PN VTM  +L  CT    L  GK +H  + K  L+ ++  L   L+++YA     +  
Sbjct: 297 VEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLC 356

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
            ++  E   R I +WN +++ Y   G  +E +  FV M++ G  P+  +    L+A  + 
Sbjct: 357 EKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPDSFSLASSLSASGNE 416

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHY--GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           G +  G  +   ++      P ++ Y    ++++  + G +D A+ +   M  +  ++ W
Sbjct: 417 GELQLGLQIHGHVIKR----PFMDEYVFNSLINMYSKCGYVDLAYMIFDQMEPK-GVVTW 471

Query: 549 GALLAASKLHKN-----------------PSMGEIAATQILE 573
            +++  S L +N                 P +GE+A   +++
Sbjct: 472 NSMI--SGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQ 511


>gi|334187347|ref|NP_680777.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635624|sp|Q3E9N1.2|PP359_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g39952, mitochondrial; Flags: Precursor
 gi|332661744|gb|AEE87144.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 775

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/585 (33%), Positives = 328/585 (56%), Gaps = 8/585 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTI---LKACAQVLMTHLGKEIHG 95
           + ++++ +++N +    L     M   GS+VD     T+    +AC+ +     G+ +HG
Sbjct: 195 WTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHG 254

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           FA+KNGL    +V +++   YS+ G+   A   F E+ + D+ SW+++I    R G  EE
Sbjct: 255 FAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEE 314

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           + ++  EM+   + P  V +  +++    +  V  GKA H  V+R+C    L   +  +L
Sbjct: 315 SFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCF--SLDSTVCNSL 372

Query: 216 IDMYSKCGNLAYAKQLFNRLNQN-SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           + MY K   L+ A++LF R+++  +  +W  M+ GY +     + + LF ++    +   
Sbjct: 373 LSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEID 432

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
             +  S+I  C  +G + LGK LH Y+++   + ++++ N+L+D+YGK  ++  A  +F 
Sbjct: 433 SASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFC 492

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
              + +V+ WNA+I++Y      +KA  LF  M     +P+ +T+V LL  C   G+LE 
Sbjct: 493 EADT-NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLER 551

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G+ +H YI +   E+++ L  AL+DMYAKCG +  +  LF     +D   WN M++GYGM
Sbjct: 552 GQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGM 611

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           HG  E A+  F  ME S VKP G TF+ LL+AC+HAGLV +GK +F KM H   + P ++
Sbjct: 612 HGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLK 670

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HY C+VDLL R+G L+EA   + SMP  P+ ++WG LL++   H    MG   A + +  
Sbjct: 671 HYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVAS 730

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           +PQN GY ++++N+Y+ A +W +    R +M+E  V K  G S V
Sbjct: 731 DPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 272/537 (50%), Gaps = 30/537 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++ ++  N   + +L  +  M  +G   D+FT P ++ ACA++L  H+G  +HG  +
Sbjct: 93  WNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVL 152

Query: 99  KNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           K+G  D +  V  + +  YS+CG L  A  +FDEMP+RDVV+W+ +I G+ + G  E  L
Sbjct: 153 KHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGL 212

Query: 158 EVMREMRFM--DI-RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA---- 210
             + +M     D+ +P+   +       +++  +  G+ +H   V+N      G+A    
Sbjct: 213 GYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKN------GLASSKF 266

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           + +++   YSK GN + A   F  L    + SWT +I+   R  ++ E   +F EM  + 
Sbjct: 267 VQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKG 326

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + P  + I  LI E G +  +  GK  H +++R+ F     + N+L+ MY K   +  A 
Sbjct: 327 MHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAE 386

Query: 331 TLFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
            LF  +  + +   WN ++  Y +  C  K  ELF  ++   +  +  +   ++S C+  
Sbjct: 387 KLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHI 446

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           GA+ +GK LH Y+ K  L++ + +  +L+D+Y K GD+  A+R+F EA   ++  WNAM+
Sbjct: 447 GAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEAD-TNVITWNAMI 505

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           A Y      E+A+  F  M     KP+ IT + LL AC + G +  G     +M+H    
Sbjct: 506 ASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERG-----QMIH--RY 558

Query: 510 VPKIEH------YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
           + + EH         ++D+  + G L+++ E+  +   + + + W  +++   +H +
Sbjct: 559 ITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN-QKDAVCWNVMISGYGMHGD 614



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 130/525 (24%), Positives = 244/525 (46%), Gaps = 20/525 (3%)

Query: 51  KPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSN 110
           KP+  + +      + S VD   I  IL  C Q L     ++ +   I  GL  + +V++
Sbjct: 7   KPNLVVTLRKLSSSSASYVDRH-ISVIL--CDQSLSLESLRKHNALIITGGLSENIFVAS 63

Query: 111 ALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRP 170
            LI  Y+  G    +  +F  +  RD+  W+++I+ +   G    +L     M      P
Sbjct: 64  KLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSP 123

Query: 171 SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQ 230
                  +VS  A++    +G  +H  V+++   ++   A+  + +  YSKCG L  A  
Sbjct: 124 DHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDR-NTAVGASFVYFYSKCGFLQDACL 182

Query: 231 LFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF--- 287
           +F+ +    VV+WT +ISG+++  E   G+    +M        +    +L  ECGF   
Sbjct: 183 VFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTL--ECGFQAC 240

Query: 288 --VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
             +G L+ G+ LH + ++NG   S  + +++   Y K      A   F  +  +D+  W 
Sbjct: 241 SNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWT 300

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
           ++I++ A++  ++++F++F  M+   + P+ V +  L++   +   +  GK  H ++ + 
Sbjct: 301 SIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRH 360

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLF---SEAIYRDICMWNAMMAGYGMHGCGEEAL 462
              +D  +  +L+ MY K   ++ A +LF   SE   ++   WN M+ GYG   C  + +
Sbjct: 361 CFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEA--WNTMLKGYGKMKCHVKCI 418

Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDL 522
             F  ++  G++ +  +   ++++CSH G V  GKS+   +V    L   I     ++DL
Sbjct: 419 ELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVK-TSLDLTISVVNSLIDL 477

Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
            G+ G L  A  M        N+I W A++ AS +H   S   IA
Sbjct: 478 YGKMGDLTVAWRMF--CEADTNVITWNAMI-ASYVHCEQSEKAIA 519


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 207/565 (36%), Positives = 321/565 (56%), Gaps = 8/565 (1%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL-DGDAYVSNALIQMYSECGSLVSARYL 128
           D FT P++++A           ++H  A++ GL     + S +L+  Y   G +  A  +
Sbjct: 69  DGFTFPSLIRAAPS---NASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKV 125

Query: 129 FDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV 188
           FDEM  RDV +W+ M+ G  R     EA+ +   M    +    V + S++ +   + D 
Sbjct: 126 FDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQ 185

Query: 189 DLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
            L   +H   V++  D++L V    ALID+Y K G L  A+ +F+ +    +V+W  +IS
Sbjct: 186 VLALVMHVYAVKHGLDKELFVC--NALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIIS 243

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
           G  +  +    +++F  M    V P  +T++SL       G  +  K LH Y++R G++ 
Sbjct: 244 GCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDV 303

Query: 309 SLAMA-NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
              +A NA+VDMY K   I +A+ +FD M  +D + WN +I+ Y Q    ++A E + HM
Sbjct: 304 DDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHM 363

Query: 368 -KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
            K   ++  + T V +L   +  GAL+ G  +H    K GL VDV + T L+D+YAKCG 
Sbjct: 364 QKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGK 423

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           +  A  LF +   R    WNA+++G G+HG G EAL  F  M++ G+KP+ +TF+ LL A
Sbjct: 424 LAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAA 483

Query: 487 CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
           CSHAGLV +G+S FD M     +VP  +HY CM D+LGRAG LDEA   I++MP++P+  
Sbjct: 484 CSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSA 543

Query: 547 VWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMK 606
           VWGALL A ++H N  MG++A+  + E++P+N GY VLMSN+YA   +W+ V  VR +++
Sbjct: 544 VWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVR 603

Query: 607 EIRVKKEPGFSSVEVNGLVHKFIRG 631
              ++K PG+SS+EV   V+ F  G
Sbjct: 604 RQNLQKTPGWSSIEVKRSVNVFYSG 628


>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/573 (34%), Positives = 337/573 (58%), Gaps = 5/573 (0%)

Query: 64  KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL-DGDAYVSNALIQMYSECGSL 122
           K G + D  T+ ++L  CA+     + + +H +A+K GL  G   V NAL+ +Y +CGS 
Sbjct: 233 KPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKVGNALVDVYGKCGSE 292

Query: 123 VSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLF 182
            +++ +FDE+  R+V+SW+ +I  +   G   +AL+V R M    +RP+ V + SM+ + 
Sbjct: 293 KASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVL 352

Query: 183 ADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVS 242
            ++    LG  +H   ++   +    V I+ +LIDMY+K G+   A  +FN++   ++VS
Sbjct: 353 GELGLFKLGMEVHGFSLKMAIESD--VFISNSLIDMYAKSGSSRIASTIFNKMGVRNIVS 410

Query: 243 WTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYIL 302
           W  MI+ + R     E V L  +M  +   P+ +T  +++  C  +G L +GK +HA I+
Sbjct: 411 WNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKEIHARII 470

Query: 303 RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
           R G    L ++NAL DMY KC  +  A+ +F+ +  +D + +N +I  Y++ +   ++  
Sbjct: 471 RVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGYSRTNDSLESLR 529

Query: 363 LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYA 422
           LF  M++  +RP+ V+ +G++S C     +  GK +H  + ++     + +  +L+D+Y 
Sbjct: 530 LFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYT 589

Query: 423 KCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
           +CG ++ A ++F     +D+  WN M+ GYGM G  + A+  F  M+  GV+ + ++F+ 
Sbjct: 590 RCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVEYDSVSFVA 649

Query: 483 LLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
           +L+ACSH GL+ +G+  F KM+  L + P   HY CMVDLLGRAGL++EA ++I+ + + 
Sbjct: 650 VLSACSHGGLIEKGRKYF-KMMCDLNIEPTHTHYACMVDLLGRAGLMEEAADLIRGLSII 708

Query: 543 PNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVR 602
           P+  +WGALL A ++H N  +G  AA  + E++PQ+ GY +L+SN+YA A RW++   VR
Sbjct: 709 PDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVR 768

Query: 603 RVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
            +MK    KK PG S V+V  LVH F+ G  ++
Sbjct: 769 ELMKSRGAKKNPGCSWVQVGDLVHAFLVGEKID 801



 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 164/515 (31%), Positives = 275/515 (53%), Gaps = 32/515 (6%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           N L R NS+   +            Y  M + G + D  T P +LK C+  +    G+E+
Sbjct: 107 NTLIRANSIAGVF-------DGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGREV 159

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG A K G DGD +V N L+  Y  CG    A  +FDEMP RD VSW+T+I      G  
Sbjct: 160 HGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGFY 219

Query: 154 EEALEVMREMRFMD--IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--- 208
           EEAL   R M      I+P  V ++S++ + A+  D  + + +H      C   K+G   
Sbjct: 220 EEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVH------CYALKVGLLG 273

Query: 209 --VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
             V +  AL+D+Y KCG+   +K++F+ +++ +V+SW  +I+ +    +  + + +F  M
Sbjct: 274 GHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLM 333

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
           I+E + P+ +TI S++   G +G  +LG  +H + L+   E  + ++N+L+DMY K    
Sbjct: 334 IDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSS 393

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
           R A T+F+ M  ++++ WNA+I+ +A+     +A EL   M+     PN VT   +L  C
Sbjct: 394 RIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPAC 453

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
              G L +GK +H  I + G  +D+ +  AL DMY+KCG +N A  +F+ ++ RD   +N
Sbjct: 454 ARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFNISV-RDEVSYN 512

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
            ++ GY       E+L  F +M   G++P+ ++F+G+++AC++   + +GK      +HG
Sbjct: 513 ILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKE-----IHG 567

Query: 507 LGLVPKIEHY-----GCMVDLLGRAGLLDEAHEMI 536
           L LV K+ H        ++DL  R G +D A ++ 
Sbjct: 568 L-LVRKLFHTHLFVANSLLDLYTRCGRIDLATKVF 601



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +N+++ ++ +N     A+ +   M+  G   +N T   +L ACA++   ++GKE
Sbjct: 405 VRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNVGKE 464

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IH   I+ G   D +VSNAL  MYS+CG L  A+ +F+ +  RD VS++ +I GY R   
Sbjct: 465 IHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGYSRTND 523

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
             E+L +  EMR + +RP  V+ + +VS  A++A +  GK IH  +VR      L V  A
Sbjct: 524 SLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHLFV--A 581

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            +L+D+Y++CG +  A ++F  +    V SW  MI GY    E++  + LF  M E+ V 
Sbjct: 582 NSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKEDGVE 641

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
              ++ ++++  C   G ++ G+     +     E +      +VD+ G+   +  A  L
Sbjct: 642 YDSVSFVAVLSACSHGGLIEKGRKYFKMMCDLNIEPTHTHYACMVDLLGRAGLMEEAADL 701

Query: 333 FDGMK-SKDVMIWNAVISA 350
             G+    D  IW A++ A
Sbjct: 702 IRGLSIIPDTNIWGALLGA 720



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 6/180 (3%)

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQG-LEVDVILKTALVDMYAKCGDVNGAYRLF--SEAI 438
           LL LCT    L   K +H Y    G L   V L  +L+  YA  G  + +  LF  S A 
Sbjct: 40  LLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAY 99

Query: 439 YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKS 498
            R   +WN ++    + G   +    +  M R+GVKP+  T+  +L  CS    V +G+ 
Sbjct: 100 SRSAFLWNTLIRANSIAGV-FDGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGRE 158

Query: 499 VFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           V   +   LG    +     ++   G  GL  +A ++   MP R + + W  ++    LH
Sbjct: 159 V-HGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPER-DKVSWNTVIGLCSLH 216


>gi|242033481|ref|XP_002464135.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
 gi|241917989|gb|EER91133.1| hypothetical protein SORBIDRAFT_01g012973 [Sorghum bicolor]
          Length = 576

 Score =  370 bits (951), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 196/544 (36%), Positives = 315/544 (57%), Gaps = 7/544 (1%)

Query: 9   NLEQTRQCHAHIIKTHFKFS---YTNIINPLTR-YNSLVTSYIKNNKPSSALNIYAFMRK 64
           N E  ++   HI +     +   +  I  P  R YN+L+ +Y       +A+++Y  M  
Sbjct: 33  NKEWQQELEQHIARGQLALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLY 92

Query: 65  NGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVS 124
                + +T P +LKAC+ +     G+ IH  A   GL  D +VS ALI +Y  C     
Sbjct: 93  FRVPPNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGP 152

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVSLFA 183
           A  +F +MP RDVV+W+ M+ GY   G+   A+  + +M+    +RP+   ++S++ L A
Sbjct: 153 AANVFAKMPMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLA 212

Query: 184 DVADVDLGKAIHACVVRNCKDE-KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVS 242
               +  G ++HA  +R   D+ +  V I TAL+DMY+KC +L YA ++F+ +   + V+
Sbjct: 213 QHGALFQGTSVHAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVT 272

Query: 243 WTVMISGYIRCNEINEGVRLFAEMIEENV-FPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           W+ +I G++ C+ + E   LF +M+ E + F S  ++ S +  C  +  L++G  LHA +
Sbjct: 273 WSALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALL 332

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
            ++G    L   N+L+ MY K   I  A  LFD +  KD + + A++S Y Q    ++AF
Sbjct: 333 AKSGIHADLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAF 392

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
            +F  M+   V+P+  TMV L+  C+   AL+ G+  H  +  +GL ++  +  +L+DMY
Sbjct: 393 LVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMY 452

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
           AKCG ++ + ++F +   RDI  WN M+AGYG+HG G+EA   F+ M+  G +P+ +TFI
Sbjct: 453 AKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFI 512

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
            L+ ACSH+GLVTEGK  FD M H  G++P++EHY CMVDLL R G LDEA++ I+SMPL
Sbjct: 513 CLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPL 572

Query: 542 RPNM 545
           + ++
Sbjct: 573 KADV 576


>gi|449439735|ref|XP_004137641.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
 gi|449514868|ref|XP_004164502.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 601

 Score =  370 bits (951), Expect = e-99,   Method: Compositional matrix adjust.
 Identities = 199/600 (33%), Positives = 333/600 (55%), Gaps = 9/600 (1%)

Query: 26  KFSYTNII---NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACA 82
           +FS ++ +    PL  +N  + S +     + +L  Y+FMR +G   +NFT P +LKACA
Sbjct: 5   RFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACA 64

Query: 83  QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
            +     G  +H   I  G + D +V  +L+ MYS+  +L ++R +FDE   R V+SW++
Sbjct: 65  NLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNS 124

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL--GKAIHACVVR 200
           MI  Y R     EAL++ REM      P+    +S++S FAD     L  G+ +H C+ +
Sbjct: 125 MIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTK 184

Query: 201 -NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
               D+     +  +L+ MY   G +  A  +F  +++ +V+SWT+M+ GY++   + + 
Sbjct: 185 FQLHDD---TPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKV 241

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
              F++M + NV   +   + +I  C  +G L LG  LH+ +L+ G ++   +   L+ M
Sbjct: 242 FETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISM 301

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
           Y KC ++ SAR +FD +  K +  W ++IS YA A    +A  LF     + VRPN   +
Sbjct: 302 YSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAML 361

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
              +S C + G+L M + +  +I++ GL  D  + T+L+ +Y K G +  A ++F+  I+
Sbjct: 362 ATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIH 421

Query: 440 RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           RD+  W++MM GY +HG GE+ +  F +M+RSG+KP+G  +  +L ACSH+GLV +G   
Sbjct: 422 RDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEH 481

Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK 559
           F  M    G+VP + HY C+VD+L RAG L+ A   I+ MP +     W   L+A + + 
Sbjct: 482 FKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYC 541

Query: 560 NPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           +  +GE+A   +L   P+N   +VLM+N+Y    +W + A VR ++ +  + KEPG S +
Sbjct: 542 DVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 601


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 197/599 (32%), Positives = 347/599 (57%), Gaps = 8/599 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  ++++V+ +  N+    A+  +  M + G   + +    +++AC+      +G+ I+G
Sbjct: 93  LVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYG 152

Query: 96  FAIKNG-LDGDAYVSNALIQMYSE-CGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           F +K G L+ D  V   LI M+ +  G L SA  +FD+MP R++V+W+ MI  + + G  
Sbjct: 153 FVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCA 212

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            +A+++  +M      P      S++S   ++  + LGK +H+ V+R      L V +  
Sbjct: 213 RDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIR--LGLALDVCVGC 270

Query: 214 ALIDMYSKC---GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-EGVRLFAEMIEE 269
           +L+DMY+KC   G++  ++++F ++ +++V+SWT +I+ Y++  E + E + LF +MI  
Sbjct: 271 SLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISG 330

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
           ++ P+  +  S++  CG +     G+ +++Y ++ G      + N+L+ MY +   +  A
Sbjct: 331 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 390

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           R  FD +  K+++ +NA++  YA+    ++AF LF  +  + +  +  T   LLS     
Sbjct: 391 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 450

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           GA+  G+ +H  + K G + +  +  AL+ MY++CG++  A+++F+E   R++  W +M+
Sbjct: 451 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 510

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
            G+  HG    AL  F  M  +G KPN IT++ +L+ACSH G+++EG+  F+ M    G+
Sbjct: 511 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 570

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
           VP++EHY CMVDLLGR+GLL EA E I SMPL  + +VW  LL A ++H N  +G  AA 
Sbjct: 571 VPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAE 630

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            ILE EP +    +L+SN++A A +W DV  +R+ MKE  + KE G S +EV   VH+F
Sbjct: 631 MILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRF 689



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/510 (27%), Positives = 259/510 (50%), Gaps = 9/510 (1%)

Query: 55  ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
           A +    M +  +  D  T   +LK+C +     LGK +H   +++GL+ D+ V N LI 
Sbjct: 10  AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 69

Query: 115 MYSECGSLVSARYLFDEMPN-RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEV 173
           +YS+CG   +AR +F+ M N RD+VSWS M+  +    +  +A+    +M  +   P+E 
Sbjct: 70  LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 129

Query: 174 AMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK-CGNLAYAKQLF 232
              +++   ++     +G+ I+  VV+    E   V +   LIDM+ K  G+L  A ++F
Sbjct: 130 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEA-DVCVGCELIDMFVKGSGDLGSAYKVF 188

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
           +++ + ++V+WT+MI+ + +     + + LF +M      P   T  S++  C  +G L 
Sbjct: 189 DKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLA 248

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCR---EIRSARTLFDGMKSKDVMIWNAVIS 349
           LGK LH+ ++R G    + +  +LVDMY KC     +  +R +F+ M   +VM W A+I+
Sbjct: 249 LGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIIT 308

Query: 350 AYAQA-HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
           AY Q+  C  +A ELF  M    +RPN  +   +L  C        G+ +++Y  K G+ 
Sbjct: 309 AYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIA 368

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
               +  +L+ MYA+ G +  A + F     +++  +NA++ GY  +   EEA + F ++
Sbjct: 369 SVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEI 428

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
             +G+  +  TF  LL+  +  G + +G+ +  +++ G G          ++ +  R G 
Sbjct: 429 ADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRCGN 487

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           ++ A ++   M  R N+I W +++     H
Sbjct: 488 IEAAFQVFNEMEDR-NVISWTSMITGFAKH 516


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 200/605 (33%), Positives = 348/605 (57%), Gaps = 12/605 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV----DNFTIPTILKACAQVLMTHLGK 91
           L  +NS++  +  N        +   M +   E+    D  T+ T+L  CA+     +GK
Sbjct: 250 LVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGK 309

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            +HG A+K  LD +  V+NAL+ MYS+CG +  A+ +F    N++VVSW+TM+ G+   G
Sbjct: 310 GVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAG 369

Query: 152 LPEEALEVMREMRFM--DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKL 207
              +  +++R+M     D+R  EV +++ V +  + + +   K +H   ++     + +L
Sbjct: 370 DIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNEL 429

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
              +A A +  Y+KCG+L+YA ++F  +   +V SW  +I GY + ++    +  + +M 
Sbjct: 430 ---VANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMK 486

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
              + P   T+ SL+  C  +  L+LGK +H  I+RN  E    +  +L+ +Y  C E+ 
Sbjct: 487 SSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELS 546

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           +A  LFD M+ K ++ WN +++ Y Q    ++A  LF  M +  V+P E++M+ +   C+
Sbjct: 547 TAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACS 606

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
              +L +G+  H Y  K  LE +  +  +++DMYAK G V  ++++F+    R +  WNA
Sbjct: 607 LLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKERSVASWNA 666

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           M+ GYG+HG  +EA+  F +M+R+G  P+ +TF+G+L AC+H+GLV EG +  D+M    
Sbjct: 667 MVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLF 726

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEM-IKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
           G+ P ++HY C++D+L RAG LDEA ++  + M   P + +W  LL++ ++HKN  MGE 
Sbjct: 727 GMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPGVGIWNFLLSSCRIHKNLEMGEK 786

Query: 567 AATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVH 626
            A ++   EP+     VL+SN+YA + +W++V  VR+ MKE+ ++K+ G S +E+NG V 
Sbjct: 787 IAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQRMKEMSLRKDAGCSWIELNGKVF 846

Query: 627 KFIRG 631
            F+ G
Sbjct: 847 SFVAG 851



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 161/535 (30%), Positives = 277/535 (51%), Gaps = 20/535 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFM-RKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           L ++N++++SY +N    + L ++  M  ++G   DNFT P ++KACA V    +G  +H
Sbjct: 148 LFQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVH 207

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           G  +K  L  D +VSNAL+  Y   GS+  A  +F  MP R++VSW++MIR +   GL E
Sbjct: 208 GLVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSE 267

Query: 155 EALEVMREMRFMD----IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           E   ++ +M   D      P    + +++ + A   ++ +GK +H   ++   D++  V 
Sbjct: 268 ECFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKE--VV 325

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE-- 268
           +  AL+DMYSKCG +  A+ +F   N  +VVSW  M+ G+    +I++   L  +M+   
Sbjct: 326 VNNALMDMYSKCGCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGG 385

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM-ANALVDMYGKCREIR 327
            ++   E+TIL+ +  C     L   K LH Y L+  F  +  + ANA V  Y KC  + 
Sbjct: 386 GDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSLS 445

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            A  +F  ++SK V  WNA+I  Y+Q+     + + +  MK S + P+  T+  LLS C+
Sbjct: 446 YAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACS 505

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
           +  +L++GK +H  I +  LE D  +  +L+ +Y  CG+++ A+ LF     + +  WN 
Sbjct: 506 QIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNT 565

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           M+ GY  +G  E AL  F  M   GV+P  I+ + +  ACS    +  G+       HG 
Sbjct: 566 MVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGRE-----AHGY 620

Query: 508 GLVPKIEHYG----CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            L   +E        ++D+  + G + E+ ++   +  R ++  W A++    +H
Sbjct: 621 ALKCLLEDNAFIACSVIDMYAKNGSVMESFKVFNGLKER-SVASWNAMVMGYGIH 674



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 142/522 (27%), Positives = 247/522 (47%), Gaps = 27/522 (5%)

Query: 50  NKPSSALN-IYAFMRKNGSEVDNFTIPTIL-----KACAQVLMTHLGKEIHGFAIKNG-L 102
           N P   L  I  F R+  S  D F +         +A  +     LG++IH    ++  L
Sbjct: 54  NPPQGVLQVIEEFDREEKSSSDAFLLLREALGLLLQASGRRKDIQLGRKIHQLVSESARL 113

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
             D  +   +I MYS CGS   +R +FD +  +++  W+ +I  Y R  L    LE+  +
Sbjct: 114 SNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVISSYSRNELYHNVLEMFVK 173

Query: 163 M-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
           M     + P       +V   A V++V +G A+H  VV+    E   V ++ AL+  Y  
Sbjct: 174 MITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVED--VFVSNALVSFYGT 231

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN---VFPSEITI 278
            G+++ A ++F  + + ++VSW  MI  +       E   L  +M+E++    F  ++  
Sbjct: 232 NGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVAT 291

Query: 279 LSLIIE-CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           L+ ++  C     + +GK +H   ++   +  + + NAL+DMY KC  I  A+ +F    
Sbjct: 292 LATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNNALMDMYSKCGCINDAQVIFKLNN 351

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKV--SKVRPNEVTMVGLLSLCTEAGALEMG 395
           +K+V+ WN ++  ++ A  I K F+L   M      +R +EVT++  + +C E   L   
Sbjct: 352 NKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVLPNL 411

Query: 396 KWLHTYIEKQG-LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           K LH Y  KQ  +  + ++  A V  YAKCG ++ A+R+F     + +  WNA++ GY  
Sbjct: 412 KELHCYSLKQEFVHNNELVANAFVASYAKCGSLSYAHRVFCSIRSKTVNSWNALIGGYSQ 471

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
                 +L  +  M+ SG+ P+  T   LL+ACS    +  GK      VHGL +  ++E
Sbjct: 472 SSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKE-----VHGLIIRNRLE 526

Query: 515 H----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
                Y  ++ L    G L  AH +  +M  +  ++ W  ++
Sbjct: 527 RDSFVYISLLSLYIHCGELSTAHVLFDAMEDK-TLVSWNTMV 567



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/284 (24%), Positives = 128/284 (45%), Gaps = 20/284 (7%)

Query: 291 LQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
           +QLG+ +H  +  +        +   ++ MY  C     +R++FD ++ K++  WNAVIS
Sbjct: 97  IQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNLFQWNAVIS 156

Query: 350 AYAQAHCIDKAFELFIHMKV-SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
           +Y++        E+F+ M   S + P+  T   ++  C     +++G  +H  + K  L 
Sbjct: 157 SYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLV 216

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            DV +  ALV  Y   G V+ A R+F     R++  WN+M+  +  +G  EE  +    M
Sbjct: 217 EDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEECFLLLGQM 276

Query: 469 ----ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMV 520
               +     P+  T   +L  C+    +  GK      VHGL +   ++        ++
Sbjct: 277 MEKDDEIAFTPDVATLATVLPVCARDREIGVGKG-----VHGLAMKLSLDKEVVVNNALM 331

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVW----GALLAASKLHKN 560
           D+  + G +++A  + K +    N++ W    G   AA  +HK 
Sbjct: 332 DMYSKCGCINDAQVIFK-LNNNKNVVSWNTMVGGFSAAGDIHKT 374


>gi|357120534|ref|XP_003561982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Brachypodium distachyon]
          Length = 989

 Score =  370 bits (951), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 190/582 (32%), Positives = 340/582 (58%), Gaps = 7/582 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++ Y+ NN+ + AL+ +  M+      D  T+  ++  C  +    + K IH +A+
Sbjct: 411 WNSIISGYLVNNEWNMALDTFCKMQIENVAPDATTVIKVIYGCRHIKDLRMAKSIHAYAV 470

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +N  + +  V NAL+ MY +CG L S+  LF +M  R ++SW+T+I GY      E +++
Sbjct: 471 RNRFELNQSVMNALLAMYGDCGELSSSYKLFQKMEVRMLISWNTIISGYAEIRDLEASVK 530

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN-CKDEKLGVAIATALID 217
           +  +MR   ++   V +I ++S  +   D  +G+++H+  V++ C    + +++   LI 
Sbjct: 531 LFFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLHSLAVKSGCN---MDISLTNTLIT 587

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYS CG++   ++LF+ L+  + VS+ V+++GY + N   E + LF +M++    P+ IT
Sbjct: 588 MYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYRKNNLSEEILPLFRQMVKNEQEPNHIT 647

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           +L+L+  C      Q GK +H Y +RN      +   + + MY +   +  +  LF+ + 
Sbjct: 648 VLNLLPVCQ---NHQQGKSVHCYAIRNFSTLETSFFTSAICMYSRFNNVDYSCKLFNSVG 704

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +++++WNA++SA  Q    D AF+ F  M    ++P+EVTM+ L+S C + G  ++G+ 
Sbjct: 705 ERNIIVWNAILSACVQCKLADTAFDFFRQMHFLNMKPDEVTMMSLVSACAQLGNSDLGEC 764

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +   I ++G    +++  AL+DM+++CG ++ A  LF  ++ +D   W+AM+  Y MHG 
Sbjct: 765 VTALILQKGFGGTLLVVNALIDMHSRCGSLSFARELFDSSVVKDSVTWSAMINSYSMHGD 824

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            E AL  F  M  SGVKP+ ITF+ +L+ACSH+G V + +++F  +    G+ P++EHY 
Sbjct: 825 CESALAIFSMMIDSGVKPDDITFVIILSACSHSGFVEQARALFKSLQIDHGITPRMEHYA 884

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLLGR+G LDEA+++++SM  RP+  +  +LL A + H N  +GE     +++ +  
Sbjct: 885 CMVDLLGRSGHLDEAYDVVRSMSFRPSESLLESLLGACRFHGNSKIGEAVGNLLIDSQHG 944

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           N    V++SNIYA   +WND   +R  M+   ++K+ G S V
Sbjct: 945 NPRSYVMLSNIYASVGKWNDYEWLRVDMEAKGLRKDAGVSLV 986



 Score =  282 bits (721), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 180/603 (29%), Positives = 314/603 (52%), Gaps = 14/603 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N++++ Y  N     A+     M+++G   +  T+  I  AC     +  G  +H 
Sbjct: 206 LISWNAMISGYSLNGSLREAVEATQEMQQDGMRANASTLVCIAGACGAAGDSDAGGSLHA 265

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           FA+K G+ GD  ++ ALI +Y+    L S+R LFD    +D+VS+++MI  Y + G  +E
Sbjct: 266 FALKCGVLGDESLAPALISLYAALDDLSSSRVLFDLQHVKDLVSYNSMISAYMQHGKWKE 325

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           + +V R+M    + P+ V +IS++   +D   V+LG ++H  V++    E+  +++ +AL
Sbjct: 326 SFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDSVHGMVIKFGLAEQ--ISVVSAL 383

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           + MYSK G L  AK LF+   + + + W  +ISGY+  NE N  +  F +M  ENV P  
Sbjct: 384 VSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNEWNMALDTFCKMQIENVAPDA 443

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T++ +I  C  +  L++ K +HAY +RN FE + ++ NAL+ MYG C E+ S+  LF  
Sbjct: 444 TTVIKVIYGCRHIKDLRMAKSIHAYAVRNRFELNQSVMNALLAMYGDCGELSSSYKLFQK 503

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M+ + ++ WN +IS YA+   ++ + +LF  M+   ++ + VT++GL+S  + A    +G
Sbjct: 504 MEVRMLISWNTIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISSISVAEDTTVG 563

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + LH+   K G  +D+ L   L+ MY+ CG V    RLF     R+   +N +M GY  +
Sbjct: 564 ESLHSLAVKSGCNMDISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYRKN 623

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
              EE L  F  M ++  +PN IT + LL  C +     +GKSV    +     + +   
Sbjct: 624 NLSEEILPLFRQMVKNEQEPNHITVLNLLPVCQNH---QQGKSVHCYAIRNFSTL-ETSF 679

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK--NPSMGEIAATQILE 573
           +   + +  R   +D + ++  S+  R N+IVW A+L+A    K  + +         L 
Sbjct: 680 FTSAICMYSRFNNVDYSCKLFNSVGER-NIIVWNAILSACVQCKLADTAFDFFRQMHFLN 738

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGM 633
           ++P       +MS + A A   N   G    +  + ++K  G + + VN L+    R G 
Sbjct: 739 MKPDEV---TMMSLVSACAQLGNSDLG--ECVTALILQKGFGGTLLVVNALIDMHSRCGS 793

Query: 634 VNW 636
           +++
Sbjct: 794 LSF 796



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 144/504 (28%), Positives = 266/504 (52%), Gaps = 12/504 (2%)

Query: 56  LNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQM 115
           L++Y  +   GS  DNFT P ++KACA V    LG+E+H   ++ G +G+  V  AL+ M
Sbjct: 127 LDLYRTLCTFGS--DNFTFPPVIKACAAVSCLPLGREMHCRVLRTGHEGNVGVQTALLDM 184

Query: 116 YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAM 175
           Y++ G + ++R +FD M  +D++SW+ MI GY   G   EA+E  +EM+   +R +   +
Sbjct: 185 YAKAGWIGASRTVFDFMGQKDLISWNAMISGYSLNGSLREAVEATQEMQQDGMRANASTL 244

Query: 176 ISMVSLFADVADVDLGKAIHACVVRNC---KDEKLGVAIATALIDMYSKCGNLAYAKQLF 232
           + +        D D G ++HA  ++ C    DE L    A ALI +Y+   +L+ ++ LF
Sbjct: 245 VCIAGACGAAGDSDAGGSLHAFALK-CGVLGDESL----APALISLYAALDDLSSSRVLF 299

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
           +  +   +VS+  MIS Y++  +  E   +F +M    + P+ +T++S++  C    G+ 
Sbjct: 300 DLQHVKDLVSYNSMISAYMQHGKWKESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVN 359

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
           LG  +H  +++ G    +++ +ALV MY K  E+ SA+ LFD    K+ ++WN++IS Y 
Sbjct: 360 LGDSVHGMVIKFGLAEQISVVSALVSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYL 419

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
             +  + A + F  M++  V P+  T++ ++  C     L M K +H Y  +   E++  
Sbjct: 420 VNNEWNMALDTFCKMQIENVAPDATTVIKVIYGCRHIKDLRMAKSIHAYAVRNRFELNQS 479

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           +  AL+ MY  CG+++ +Y+LF +   R +  WN +++GY      E ++  F  M + G
Sbjct: 480 VMNALLAMYGDCGELSSSYKLFQKMEVRMLISWNTIISGYAEIRDLEASVKLFFQMRQEG 539

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
           ++ + +T IGL+++ S A   T G+S+    V   G    I     ++ +    G ++  
Sbjct: 540 LQFDVVTLIGLISSISVAEDTTVGESLHSLAVKS-GCNMDISLTNTLITMYSNCGSVEAC 598

Query: 533 HEMIKSMPLRPNMIVWGALLAASK 556
             +  ++  R N + +  L+   +
Sbjct: 599 QRLFDNLSSR-NTVSYNVLMTGYR 621



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/556 (24%), Positives = 287/556 (51%), Gaps = 9/556 (1%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  YNS++++Y+++ K   + +++  M   G   +  T+ ++L  C+     +LG  
Sbjct: 304 VKDLVSYNSMISAYMQHGKWKESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVNLGDS 363

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HG  IK GL     V +AL+ MYS+ G L SA++LFD    ++ + W+++I GY     
Sbjct: 364 VHGMVIKFGLAEQISVVSALVSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYLVNNE 423

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
              AL+   +M+  ++ P    +I ++     + D+ + K+IHA  VRN    +L  ++ 
Sbjct: 424 WNMALDTFCKMQIENVAPDATTVIKVIYGCRHIKDLRMAKSIHAYAVRN--RFELNQSVM 481

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            AL+ MY  CG L+ + +LF ++    ++SW  +ISGY    ++   V+LF +M +E + 
Sbjct: 482 NALLAMYGDCGELSSSYKLFQKMEVRMLISWNTIISGYAEIRDLEASVKLFFQMRQEGLQ 541

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
              +T++ LI          +G+ LH+  +++G    +++ N L+ MY  C  + + + L
Sbjct: 542 FDVVTLIGLISSISVAEDTTVGESLHSLAVKSGCNMDISLTNTLITMYSNCGSVEACQRL 601

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FD + S++ + +N +++ Y + +  ++   LF  M  ++  PN +T++ LL +C      
Sbjct: 602 FDNLSSRNTVSYNVLMTGYRKNNLSEEILPLFRQMVKNEQEPNHITVLNLLPVCQNH--- 658

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           + GK +H Y  +    ++    T+ + MY++  +V+ + +LF+    R+I +WNA+++  
Sbjct: 659 QQGKSVHCYAIRNFSTLETSFFTSAICMYSRFNNVDYSCKLFNSVGERNIIVWNAILSAC 718

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
                 + A  FF  M    +KP+ +T + L++AC+  G    G+ V   ++   G    
Sbjct: 719 VQCKLADTAFDFFRQMHFLNMKPDEVTMMSLVSACAQLGNSDLGECV-TALILQKGFGGT 777

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           +     ++D+  R G L  A E+  S  ++ + + W A++ +  +H +        + ++
Sbjct: 778 LLVVNALIDMHSRCGSLSFARELFDSSVVK-DSVTWSAMINSYSMHGDCESALAIFSMMI 836

Query: 573 E--IEPQNYGYNVLMS 586
           +  ++P +  + +++S
Sbjct: 837 DSGVKPDDITFVIILS 852



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 226/406 (55%), Gaps = 6/406 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N++++ Y +     +++ ++  MR+ G + D  T+  ++ + +    T +G+ +H 
Sbjct: 509 LISWNTIISGYAEIRDLEASVKLFFQMRQEGLQFDVVTLIGLISSISVAEDTTVGESLHS 568

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+K+G + D  ++N LI MYS CGS+ + + LFD + +R+ VS++ ++ GY +  L EE
Sbjct: 569 LAVKSGCNMDISLTNTLITMYSNCGSVEACQRLFDNLSSRNTVSYNVLMTGYRKNNLSEE 628

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            L + R+M   +  P+ + +++++ +     +   GK++H   +RN     L  +  T+ 
Sbjct: 629 ILPLFRQMVKNEQEPNHITVLNLLPV---CQNHQQGKSVHCYAIRNF--STLETSFFTSA 683

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I MYS+  N+ Y+ +LFN + + +++ W  ++S  ++C   +     F +M   N+ P E
Sbjct: 684 ICMYSRFNNVDYSCKLFNSVGERNIIVWNAILSACVQCKLADTAFDFFRQMHFLNMKPDE 743

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T++SL+  C  +G   LG+ + A IL+ GF  +L + NAL+DM+ +C  +  AR LFD 
Sbjct: 744 VTMMSLVSACAQLGNSDLGECVTALILQKGFGGTLLVVNALIDMHSRCGSLSFARELFDS 803

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
              KD + W+A+I++Y+     + A  +F  M  S V+P+++T V +LS C+ +G +E  
Sbjct: 804 SVVKDSVTWSAMINSYSMHGDCESALAIFSMMIDSGVKPDDITFVIILSACSHSGFVEQA 863

Query: 396 KWLHTYIE-KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
           + L   ++   G+   +     +VD+  + G ++ AY +     +R
Sbjct: 864 RALFKSLQIDHGITPRMEHYACMVDLLGRSGHLDEAYDVVRSMSFR 909



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 228/464 (49%), Gaps = 16/464 (3%)

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR--DVVSWSTMIRGYHRGGLP 153
            A+   +  D  V  A++  Y   G   SA  +F     R   V S +  +R +   G  
Sbjct: 64  LAVAGAIARDTSVVTAVVDRYLSFGRPASAASVFAGAYRRRPTVYSLNLAVRCFSDHGFH 123

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            E L++ R +              ++   A V+ + LG+ +H  V+R   +  +GV   T
Sbjct: 124 RELLDLYRTL--CTFGSDNFTFPPVIKACAAVSCLPLGREMHCRVLRTGHEGNVGVQ--T 179

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMY+K G +  ++ +F+ + Q  ++SW  MISGY     + E V    EM ++ +  
Sbjct: 180 ALLDMYAKAGWIGASRTVFDFMGQKDLISWNAMISGYSLNGSLREAVEATQEMQQDGMRA 239

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +  T++ +   CG  G    G  LHA+ L+ G     ++A AL+ +Y    ++ S+R LF
Sbjct: 240 NASTLVCIAGACGAAGDSDAGGSLHAFALKCGVLGDESLAPALISLYAALDDLSSSRVLF 299

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           D    KD++ +N++ISAY Q     ++F++F  M  + + PN VT++ +L  C++   + 
Sbjct: 300 DLQHVKDLVSYNSMISAYMQHGKWKESFDVFRQMHCAGLGPNLVTVISVLPTCSDFFGVN 359

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           +G  +H  + K GL   + + +ALV MY+K G+++ A  LF     ++  +WN++++GY 
Sbjct: 360 LGDSVHGMVIKFGLAEQISVVSALVSMYSKLGELDSAKHLFDSCTEKNNLLWNSIISGYL 419

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
           ++     AL  F  M+   V P+  T I ++  C H   +   KS     +H   +  + 
Sbjct: 420 VNNEWNMALDTFCKMQIENVAPDATTVIKVIYGCRHIKDLRMAKS-----IHAYAVRNRF 474

Query: 514 EHYGCMVDLL----GRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           E    +++ L    G  G L  ++++ + M +R  +I W  +++
Sbjct: 475 ELNQSVMNALLAMYGDCGELSSSYKLFQKMEVRM-LISWNTIIS 517


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 198/603 (32%), Positives = 347/603 (57%), Gaps = 9/603 (1%)

Query: 36  LTRYNSLVTSYIKNN-KPSSALNIYAFMRKNGSEV---DNFTIPTILKACAQVLMTHLGK 91
           L  +NS++  +  N     S L +   M +NG      D  T+ T+L  CA+     LGK
Sbjct: 253 LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 312

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            +HG+A+K  LD +  ++NAL+ MYS+CG + +A+ +F    N++VVSW+TM+ G+   G
Sbjct: 313 GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 372

Query: 152 LPEEALEVMREMRF--MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
                 +V+R+M     D++  EV +++ V +    + +   K +H   ++  ++     
Sbjct: 373 DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLK--QEFVYNE 430

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            +A A +  Y+KCG+L+YA+++F+ +   +V SW  +I G+ + N+    +    +M   
Sbjct: 431 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 490

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            + P   T+ SL+  C  +  L+LGK +H +I+RN  E  L +  +++ +Y  C E+ + 
Sbjct: 491 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 550

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           + LFD M+ K ++ WN VI+ Y Q    D+A  +F  M +  ++   ++M+ +   C+  
Sbjct: 551 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL 610

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            +L +G+  H Y  K  LE D  +  +L+DMYAK G +  + ++F+    +    WNAM+
Sbjct: 611 PSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMI 670

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
            GYG+HG  +EA+  F +M+R+G  P+ +TF+G+L AC+H+GL+ EG    D+M    GL
Sbjct: 671 MGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGL 730

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMI-KSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
            P ++HY C++D+LGRAG LD+A  ++ + M    ++ +W +LL++ ++H+N  MGE  A
Sbjct: 731 KPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVA 790

Query: 569 TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            ++ E+EP+     VL+SN+YA   +W DV  VR+ M E+ ++K+ G S +E+N  V  F
Sbjct: 791 AKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSF 850

Query: 629 IRG 631
           + G
Sbjct: 851 VVG 853



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 146/463 (31%), Positives = 248/463 (53%), Gaps = 15/463 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTHLGKEIH 94
           L ++N++++SY +N      L  +  M      + D+FT P ++KACA +    +G  +H
Sbjct: 151 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 210

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           G  +K GL  D +V NAL+  Y   G +  A  LFD MP R++VSW++MIR +   G  E
Sbjct: 211 GLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSE 270

Query: 155 EALEVMREM-------RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
           E+  ++ EM        FM   P    +++++ + A   ++ LGK +H   V+   D++L
Sbjct: 271 ESFLLLGEMMEENGDGAFM---PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
              +  AL+DMYSKCG +  A+ +F   N  +VVSW  M+ G+    + +    +  +M+
Sbjct: 328 --VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385

Query: 268 E--ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
              E+V   E+TIL+ +  C     L   K LH Y L+  F ++  +ANA V  Y KC  
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           +  A+ +F G++SK V  WNA+I  +AQ++    + +  + MK+S + P+  T+  LLS 
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
           C++  +L +GK +H +I +  LE D+ +  +++ +Y  CG++     LF     + +  W
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
           N ++ GY  +G  + AL  F  M   G++  GI+ + +  ACS
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 218/456 (47%), Gaps = 15/456 (3%)

Query: 57  NIYAFMRKNGSEVDNF-----TIPTILKACAQVLMTHLGKEIHGFAI-KNGLDGDAYVSN 110
            +  F+  + S  D F      +  +L+A  +     +G++IH        L  D  +  
Sbjct: 65  TVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCT 124

Query: 111 ALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIR 169
            +I MY+ CGS   +R++FD + ++++  W+ +I  Y R  L +E LE   EM    D+ 
Sbjct: 125 RIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLL 184

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           P       ++   A ++DV +G A+H  VV+    E   V +  AL+  Y   G +  A 
Sbjct: 185 PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVED--VFVGNALVSFYGTHGFVTDAL 242

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN----VFPSEITILSLIIEC 285
           QLF+ + + ++VSW  MI  +       E   L  EM+EEN      P   T+++++  C
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
                + LGK +H + ++   +  L + NAL+DMY KC  I +A+ +F    +K+V+ WN
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 362

Query: 346 AVISAYAQAHCIDKAFELFIHMKV--SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
            ++  ++        F++   M      V+ +EVT++  + +C     L   K LH Y  
Sbjct: 363 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 422

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
           KQ    + ++  A V  YAKCG ++ A R+F     + +  WNA++ G+        +L 
Sbjct: 423 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLD 482

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
             + M+ SG+ P+  T   LL+ACS    +  GK V
Sbjct: 483 AHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEV 518



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 148/324 (45%), Gaps = 22/324 (6%)

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILS------LIIECGFVGGLQLGKWLHAY 300
           IS +    ++++  R   E + ++   S+  +L       L+   G    +++G+ +H  
Sbjct: 50  ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109

Query: 301 I-----LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
           +     LRN       +   ++ MY  C     +R +FD ++SK++  WNAVIS+Y++  
Sbjct: 110 VSGSTRLRN----DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNE 165

Query: 356 CIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
             D+  E FI M   + + P+  T   ++  C     + +G  +H  + K GL  DV + 
Sbjct: 166 LYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVG 225

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD-MERSG- 472
            ALV  Y   G V  A +LF     R++  WN+M+  +  +G  EE+ +   + ME +G 
Sbjct: 226 NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 285

Query: 473 --VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
               P+  T + +L  C+    +  GK V    V  L L  ++     ++D+  + G + 
Sbjct: 286 GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK-LRLDKELVLNNALMDMYSKCGCIT 344

Query: 531 EAHEMIKSMPLRPNMIVWGALLAA 554
            A +MI  M    N++ W  ++  
Sbjct: 345 NA-QMIFKMNNNKNVVSWNTMVGG 367


>gi|297834550|ref|XP_002885157.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330997|gb|EFH61416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 655

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 200/594 (33%), Positives = 324/594 (54%), Gaps = 8/594 (1%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           INP+  ++ ++ +Y+ N     AL++Y  M  +G     FT P +LKACA +     GK 
Sbjct: 66  INPIA-WDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGKL 124

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IH     +    D YV  AL+  Y++CG L  A  +FDEMP RD+V+W+ MI G+     
Sbjct: 125 IHSHVKCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLHCC 184

Query: 153 PEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
             + + +  +MR  D + P+   ++ M         +  GKA+H    R      L   +
Sbjct: 185 LTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL--VV 242

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI--EE 269
            T ++D+Y+K   + YA+++F+   + + V+W+ MI GY+    I E   +F +M+   +
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVNAD 302

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
               + + I  +++ C   G L  G+ +H Y ++ GF   L + N ++  Y K   +  A
Sbjct: 303 MAMVTPVAIGLILMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLCDA 362

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
              F  +  KD++ +N++IS   +    +++F LF  MK S +RP+  T++G+L+ C+  
Sbjct: 363 FRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACSNL 422

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            AL  G   H Y    G  V+  +  AL+DMY KCG +  A R+F     RDI  WN M+
Sbjct: 423 AALGHGSSCHGYCVVNGYAVNTSICNALMDMYTKCGKLYVAKRVFDTMHKRDIVSWNTML 482

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG-LG 508
            G+G+HG G+EAL  F  M+ +GV P+ +T + +L+ACSH+GLV EGK +F+ M  G   
Sbjct: 483 FGFGIHGLGKEALSLFNSMQDTGVHPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFN 542

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
           ++P+++HY CM DLL RAG LDEA++ +  MP  P++ V G LL+A   +KN  +G   +
Sbjct: 543 VIPRLDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNVELGNEVS 602

Query: 569 TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
            ++  +        VL+SN Y+ A RW D A +R   K+  + K PG+S V+V+
Sbjct: 603 KKMQSLGETTESL-VLLSNTYSAAERWEDAAKIRMTQKKSGLLKTPGYSWVDVD 655



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/491 (28%), Positives = 254/491 (51%), Gaps = 16/491 (3%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLD-GDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           +L++C +     LG+ IH   +K  L    + V   L ++Y+ C  +  AR++FDE+P+ 
Sbjct: 5   LLESCIRSRNLILGQIIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHP 64

Query: 136 DV--VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
            +  ++W  MIR Y   G  E+AL++  +M    +RP++     ++   A +  ++ GK 
Sbjct: 65  RINPIAWDLMIRAYVSNGFAEKALDLYYKMLNSGVRPTKFTYPFVLKACAGLRAIEDGKL 124

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           IH+ V   C +    + + TAL+D Y+KCG L  A ++F+ + +  +V+W  MISG+   
Sbjct: 125 IHSHV--KCSNFAADMYVCTALVDFYAKCGELDMAIKVFDEMPKRDIVAWNAMISGFSLH 182

Query: 254 NEINEGVRLFAEMIEENVF-PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
             + + + LF +M   +   P+  TI+ +    G  G L+ GK +H Y  R GF   L +
Sbjct: 183 CCLTDVIGLFLDMRRSDCLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVV 242

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK- 371
              ++D+Y K + I  AR +FD    K+ + W+A+I  Y +   I +A E+F+ M V+  
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDSDFKKNEVTWSAMIGGYVENEMIKEAGEVFLQMLVNAD 302

Query: 372 ---VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
              V P  + ++  L  C   G L  G+ +H Y  K G  +D+ +   ++  YAK G + 
Sbjct: 303 MAMVTPVAIGLI--LMGCARFGDLSGGRCVHCYAIKAGFILDLTVGNTVISFYAKYGSLC 360

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A+R F+E   +DI  +N++++G   +   EE+   F  M+ SG++P+  T +G+L ACS
Sbjct: 361 DAFRQFTEIGLKDIVSYNSLISGCVENCRAEESFRLFHQMKSSGIRPDITTLLGILTACS 420

Query: 489 HAGLVTEGKSVFDK-MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           +   +  G S     +V+G  +   I +   ++D+  + G L  A  +  +M  R +++ 
Sbjct: 421 NLAALGHGSSCHGYCVVNGYAVNTSICN--ALMDMYTKCGKLYVAKRVFDTMHKR-DIVS 477

Query: 548 WGALLAASKLH 558
           W  +L    +H
Sbjct: 478 WNTMLFGFGIH 488


>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
 gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
          Length = 792

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 198/584 (33%), Positives = 330/584 (56%), Gaps = 9/584 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + S+++SY  N     AL++Y  M  +G + D+ T  + L AC +++    GK IH   +
Sbjct: 215 WTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKLVD---GKAIHARIV 271

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            + ++ D +V +ALI MY+ CG + SAR  F+++ N+ VV W++++  Y +     EAL+
Sbjct: 272 SSNMESD-FVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALD 330

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M    +    V  ++ +   A +  +  GKAIH+ V   C  + L   + TAL+ M
Sbjct: 331 LYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVF-ECGFQSL--VVHTALLTM 387

Query: 219 YSKCGNLAYAKQLFNRLNQN-SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           Y+KCG L  A+ +FNR+ Q  +V  WT MIS Y +     E + L+ +M+ E   P+E T
Sbjct: 388 YAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYT 447

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             +++  C   G L+ G  +H ++  +    ++A+ NALV MY KC  +  A++ F+   
Sbjct: 448 FSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASG 507

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KD++ WNA+I AYAQ     +A +L+  M    V P+EVT+   LS C  +G+L++G+ 
Sbjct: 508 RKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGRE 567

Query: 398 LHTYIEK-QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
           +H+ + K Q     ++++TALV+MY +CG +  A  +F +   RD+  W AM + Y   G
Sbjct: 568 IHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQG 627

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             ++ L  +++M   G++PN ITF  +L  CSHAGL+  G   F +M     +VP  EH+
Sbjct: 628 HADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHF 687

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            CMVDLLGR+G L +A  +++SMP +P+ + W  +L + K H +    + AA ++ E++P
Sbjct: 688 LCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDP 747

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
           +N     L+S+I+  A    +   V+  MKE+ +KK PG S +E
Sbjct: 748 ENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLIE 791



 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 177/525 (33%), Positives = 289/525 (55%), Gaps = 11/525 (2%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I  +  YN ++++Y KN   + AL +Y  M + G E D  T   +L +C+ V      +E
Sbjct: 106 IKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREARE 165

Query: 93  IHGFAIKNG--LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           IH   I+    +  +  + NAL+ MY +CGS+  AR +FD + NRD VSW++MI  Y   
Sbjct: 166 IHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANN 225

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           G  +EAL++ ++M    I+P  +   S  +L A    VD GKAIHA +V +  +      
Sbjct: 226 GFCDEALDLYQQMDADGIQPDSITFTS--ALLACTKLVD-GKAIHARIVSSNMESDF--- 279

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           + +ALI+MY++CG+++ A+Q F ++    VV WT +++ Y++     E + L+  M  E 
Sbjct: 280 VGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEG 339

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           V    +T ++ +  C  +G L+ GK +H+ +   GF+ SL +  AL+ MY KC E+ +AR
Sbjct: 340 VHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQ-SLVVHTALLTMYAKCGELDAAR 398

Query: 331 TLFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
            +F+ ++ K +V  W A+ISAYAQA    +A EL+  M     RPNE T   +L+ C+ +
Sbjct: 399 AVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSS 458

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           G LE G  +H ++E   L  +V ++ ALV MYAKCG +  A   F  +  +D+  WNAM+
Sbjct: 459 GDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMI 518

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
             Y  HG G EAL  +  M   GV P+ +T    L+AC+ +G +  G+ +  +++     
Sbjct: 519 GAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSF 578

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
              +     +V++ GR G L+ A  M + M  R +++ W A+ +A
Sbjct: 579 RSSLMVQTALVNMYGRCGRLETARSMFEDMGQR-DVLSWTAMTSA 622



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 247/484 (51%), Gaps = 9/484 (1%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN-R 135
           +L+ C ++     GK +H   ++ G   + ++ N LIQMY  CG +  AR  F    + +
Sbjct: 48  LLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIK 107

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
            V  ++ M+  Y + GL   ALE+   M      P ++    ++   + V  +   + IH
Sbjct: 108 AVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIH 167

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
           A ++   +  +  +++  AL++MY KCG++  A+++F+ +     VSWT MIS Y     
Sbjct: 168 ASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGF 227

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
            +E + L+ +M  + + P  IT  S ++ C     L  GK +HA I+ +  E    + +A
Sbjct: 228 CDEALDLYQQMDADGIQPDSITFTSALLAC---TKLVDGKAIHARIVSSNMESDF-VGSA 283

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
           L++MY +C ++ SAR  F+ +++K V+ W ++++AY Q     +A +L+  M    V  +
Sbjct: 284 LINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHAD 343

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
            VT V  L  C   GAL+ GK +H+ + + G +  +++ TAL+ MYAKCG+++ A  +F+
Sbjct: 344 GVTYVTALGACASLGALKEGKAIHSRVFECGFQ-SLVVHTALLTMYAKCGELDAARAVFN 402

Query: 436 EAIY-RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
                R++  W AM++ Y   G  +EAL  +  M   G +PN  TF  +L ACS +G + 
Sbjct: 403 RVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLE 462

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            G  +    V    L   +     +V +  + G L+ A    ++   R +++ W A++ A
Sbjct: 463 AGMKIHGH-VENSELASNVAVQNALVTMYAKCGSLELAKSAFEASG-RKDLVSWNAMIGA 520

Query: 555 SKLH 558
              H
Sbjct: 521 YAQH 524



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 1/145 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++ +Y ++     AL++Y  M   G   D  TI + L ACA      LG+EIH 
Sbjct: 511 LVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHS 570

Query: 96  FAIKN-GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
             +KN        V  AL+ MY  CG L +AR +F++M  RDV+SW+ M   Y + G  +
Sbjct: 571 RVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHAD 630

Query: 155 EALEVMREMRFMDIRPSEVAMISMV 179
           + L++  EM    IRP+E+   S++
Sbjct: 631 QVLDLYLEMVLHGIRPNEITFTSIL 655


>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  370 bits (950), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 197/599 (32%), Positives = 347/599 (57%), Gaps = 8/599 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  ++++V+ +  N+    A+  +  M + G   + +    +++AC+      +G+ I+G
Sbjct: 111 LVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYG 170

Query: 96  FAIKNG-LDGDAYVSNALIQMYSE-CGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           F +K G L+ D  V   LI M+ +  G L SA  +FD+MP R++V+W+ MI  + + G  
Sbjct: 171 FVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCA 230

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            +A+++  +M      P      S++S   ++  + LGK +H+ V+R      L V +  
Sbjct: 231 RDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIR--LGLALDVCVGC 288

Query: 214 ALIDMYSKC---GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-EGVRLFAEMIEE 269
           +L+DMY+KC   G++  ++++F ++ +++V+SWT +I+ Y++  E + E + LF +MI  
Sbjct: 289 SLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISG 348

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
           ++ P+  +  S++  CG +     G+ +++Y ++ G      + N+L+ MY +   +  A
Sbjct: 349 HIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDA 408

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           R  FD +  K+++ +NA++  YA+    ++AF LF  +  + +  +  T   LLS     
Sbjct: 409 RKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASI 468

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           GA+  G+ +H  + K G + +  +  AL+ MY++CG++  A+++F+E   R++  W +M+
Sbjct: 469 GAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMI 528

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
            G+  HG    AL  F  M  +G KPN IT++ +L+ACSH G+++EG+  F+ M    G+
Sbjct: 529 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGI 588

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
           VP++EHY CMVDLLGR+GLL EA E I SMPL  + +VW  LL A ++H N  +G  AA 
Sbjct: 589 VPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAE 648

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            ILE EP +    +L+SN++A A +W DV  +R+ MKE  + KE G S +EV   VH+F
Sbjct: 649 MILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRF 707



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/510 (27%), Positives = 259/510 (50%), Gaps = 9/510 (1%)

Query: 55  ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
           A +    M +  +  D  T   +LK+C +     LGK +H   +++GL+ D+ V N LI 
Sbjct: 28  AFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLIS 87

Query: 115 MYSECGSLVSARYLFDEMPN-RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEV 173
           +YS+CG   +AR +F+ M N RD+VSWS M+  +    +  +A+    +M  +   P+E 
Sbjct: 88  LYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEY 147

Query: 174 AMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK-CGNLAYAKQLF 232
              +++   ++     +G+ I+  VV+    E   V +   LIDM+ K  G+L  A ++F
Sbjct: 148 CFAAVIRACSNANYAWVGEIIYGFVVKTGYLEA-DVCVGCELIDMFVKGSGDLGSAYKVF 206

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
           +++ + ++V+WT+MI+ + +     + + LF +M      P   T  S++  C  +G L 
Sbjct: 207 DKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLA 266

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCR---EIRSARTLFDGMKSKDVMIWNAVIS 349
           LGK LH+ ++R G    + +  +LVDMY KC     +  +R +F+ M   +VM W A+I+
Sbjct: 267 LGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIIT 326

Query: 350 AYAQA-HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
           AY Q+  C  +A ELF  M    +RPN  +   +L  C        G+ +++Y  K G+ 
Sbjct: 327 AYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIA 386

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
               +  +L+ MYA+ G +  A + F     +++  +NA++ GY  +   EEA + F ++
Sbjct: 387 SVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEI 446

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
             +G+  +  TF  LL+  +  G + +G+ +  +++ G G          ++ +  R G 
Sbjct: 447 ADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMYSRCGN 505

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           ++ A ++   M  R N+I W +++     H
Sbjct: 506 IEAAFQVFNEMEDR-NVISWTSMITGFAKH 534


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  370 bits (949), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 204/630 (32%), Positives = 343/630 (54%), Gaps = 18/630 (2%)

Query: 21  IKTHFKFSYTNIINPLTRYNSLVTSYI---KNNKPSSALNIYAFMRKNGSEVDNFTIPTI 77
           +K  F     N+ + +   N++  SY+   +       + +Y+ + + G E++     + 
Sbjct: 95  VKAGFDKDALNLFDEMPERNNV--SYVTLTQGYACQDPVGLYSRLHREGHELNPHVFTSF 152

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
           LK    +    +   +H   +K G D +A+V  ALI  YS CGS+ SAR +F+ +  +D+
Sbjct: 153 LKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDI 212

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
           V W+ ++  Y   G  E++L+++  M      P+     + +     +      K++H  
Sbjct: 213 VVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQ 272

Query: 198 VVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN 257
           +++ C +  L   +   L+ +Y++ G+++ A ++FN + +N VV W+ MI+ + +    N
Sbjct: 273 ILKTCYE--LDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN 330

Query: 258 EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALV 317
           + V +F  M E  V P+E T+ S++  C       LG+ LH  +++ GF+  + ++NAL+
Sbjct: 331 KAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALI 390

Query: 318 DMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEV 377
           D+Y KC ++ +A  LF  + SK+V+ WN VI  Y       KA  +F     ++V   EV
Sbjct: 391 DVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEV 450

Query: 378 TMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
           T    L  C    ++E+G  +H    K      V +  +L+DMYAKCGD+  A  +F+E 
Sbjct: 451 TFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEM 510

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
              D+  WNA+++GY  HG G +AL  F  M+ S  KPNG+TF+G+L+ CS+AGL+ +G+
Sbjct: 511 ETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQ 570

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
             F+ M+   G+ P +EHY CMV L GR+G LD+A  +I+ +P  P++++W A+L+AS  
Sbjct: 571 DCFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMN 630

Query: 558 HKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
             N      +A +IL+I P++    VL+SN+YA A +W +VA +R+ MKE  VKKEPG S
Sbjct: 631 QYNEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLS 690

Query: 618 SVEVNGLVHKFIRG-----------GMVNW 636
            +E  G VH F  G           GM+ W
Sbjct: 691 WIEHQGDVHFFSVGSSDHPDMKLINGMLEW 720



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/494 (25%), Positives = 233/494 (47%), Gaps = 16/494 (3%)

Query: 69  VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYL 128
           +D+    T+L+ C +   +   K IH   +K G   D + +N L+  Y + G    A  L
Sbjct: 47  LDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106

Query: 129 FDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV 188
           FDEMP R+ VS+ T+ +GY           + RE    ++ P      S + LF  +   
Sbjct: 107 FDEMPERNNVSYVTLTQGYACQDPVGLYSRLHREGH--ELNPH--VFTSFLKLFVSLDKA 162

Query: 189 DLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
           ++   +H+ +V+   D      +  ALI+ YS CG++  A+ +F  +    +V W  ++S
Sbjct: 163 EICWWLHSPIVKLGYDSN--AFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVS 220

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
            Y+      + ++L + M  +   P+  T  + +     +G     K +H  IL+  +E 
Sbjct: 221 CYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYEL 280

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
              +   L+ +Y +  ++  A  +F+ M   DV+ W+ +I+ + Q    +KA ++FI M+
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMR 340

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
              V PNE T+  +L+ C       +G+ LH  + K G ++DV +  AL+D+YAKC  ++
Sbjct: 341 EGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMD 400

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A +LF+E   +++  WN ++ GY   G G +AL  F +  R+ V    +TF   L AC+
Sbjct: 401 TAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACA 460

Query: 489 HAGLVTEGKSVFDKMVHGLGL----VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
               +  G       VHGL +      ++     ++D+  + G +  A  +   M    +
Sbjct: 461 SLASMELGVQ-----VHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEME-TID 514

Query: 545 MIVWGALLAASKLH 558
           +  W AL++    H
Sbjct: 515 VASWNALISGYSTH 528


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  370 bits (949), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 199/597 (33%), Positives = 341/597 (57%), Gaps = 5/597 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMR-KNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           +  +NS++  +  +   + A++++  M  ++G   +  +I ++L  CA +     G++IH
Sbjct: 73  VVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIH 132

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
            + +K GLD    V NAL+ +Y +CG +  +R +FDE+  R+ VSW+ +I         +
Sbjct: 133 CYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERNQ 192

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           +ALE+ R M    ++P+ V   SM+ +  ++   D GK IH   +R   +    + +A A
Sbjct: 193 DALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESD--IFVANA 250

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LIDMY+K G    A  +FN++ + ++VSW  M++ + +       V L  +M  +   P+
Sbjct: 251 LIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPN 310

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            +T  +++  C  +G L+ GK +HA  +R G    L ++NAL DMY KC  +  AR +F 
Sbjct: 311 SVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFK 370

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            +  +D + +N +I  Y+Q     ++  LF+ M +  ++ + V+ +G++S C    AL+ 
Sbjct: 371 -ISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQ 429

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           GK +H    ++ L   + +  AL+D Y KCG ++ A ++F +   RD   WN+M+ GYGM
Sbjct: 430 GKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGM 489

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
            G    A+  F  M+  GV+ + +++I +L+ACSH GLV EGK  F+ M     + P   
Sbjct: 490 LGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHM-QVQNIKPTQM 548

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HY CMVDLLGRAGL++EA ++I+S+P+ P+  VWGALL A ++H    +   AA  + ++
Sbjct: 549 HYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLFKL 608

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +PQ+ GY  ++SN+YA A +W++   VR++MK    KK PG S V+++  VH F+ G
Sbjct: 609 KPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQIDNQVHAFVAG 665



 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 154/492 (31%), Positives = 263/492 (53%), Gaps = 14/492 (2%)

Query: 66  GSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSA 125
           G  +D+ T P +LKACA  L    G+EIHG   K G D D +V N L+  Y  CG L   
Sbjct: 2   GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61

Query: 126 RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVSLFAD 184
           + +FDEM  RDVVSW+++I  +   G   EA+ +  EM      RP+ V+++S++ + A 
Sbjct: 62  KRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAG 121

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
           + D   G+ IH  VV+   D +  V +  AL+D+Y KCG +  ++++F+ +++ + VSW 
Sbjct: 122 LEDGVTGRQIHCYVVKTGLDSQ--VTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWN 179

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
            +I+         + + +F  MI+  V P+ +T  S++     +     GK +H + LR 
Sbjct: 180 AIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRF 239

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
           G E  + +ANAL+DMY K      A  +F+ +  K+++ WNA+++ +AQ      A +L 
Sbjct: 240 GLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLV 299

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC 424
             M+     PN VT   +L  C   G L  GK +H    + G  VD+ +  AL DMYAKC
Sbjct: 300 RQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKC 359

Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
           G +N A R+F  ++ RD   +N ++ GY       E+L  F++M   G+K + ++++G++
Sbjct: 360 GCLNLARRVFKISL-RDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVI 418

Query: 485 NACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIKSMP 540
           +AC++   + +GK      VHGL +   +  +      ++D   + G +D A ++ + +P
Sbjct: 419 SACANLAALKQGKE-----VHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIP 473

Query: 541 LRPNMIVWGALL 552
            R +   W +++
Sbjct: 474 SR-DTASWNSMI 484



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 184/373 (49%), Gaps = 4/373 (1%)

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
           M +R  +     ++   AD   V  G+ IH  V +   D    V +   L+  Y  CG L
Sbjct: 1   MGVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSD--VFVGNTLLLFYGNCGGL 58

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM-IEENVFPSEITILSLIIE 284
              K++F+ + +  VVSW  +I  +       E + LF EM +     P+ ++I+S++  
Sbjct: 59  KDVKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPV 118

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
           C  +     G+ +H Y+++ G +  + + NALVD+YGKC  ++ +R +FD +  ++ + W
Sbjct: 119 CAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSW 178

Query: 345 NAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK 404
           NA+I++ A       A E+F  M    V+PN VT   +L +  E    + GK +H +  +
Sbjct: 179 NAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLR 238

Query: 405 QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIF 464
            GLE D+ +  AL+DMYAK G    A  +F++   ++I  WNAM+A +  +     A+  
Sbjct: 239 FGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDL 298

Query: 465 FVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLG 524
              M+  G  PN +TF  +L AC+  G +  GK +  + +   G    +     + D+  
Sbjct: 299 VRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIR-TGSSVDLFVSNALTDMYA 357

Query: 525 RAGLLDEAHEMIK 537
           + G L+ A  + K
Sbjct: 358 KCGCLNLARRVFK 370


>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
 gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
          Length = 673

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 192/546 (35%), Positives = 317/546 (58%), Gaps = 11/546 (2%)

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
           LKAC +      G+ +H   +K G   D +V N+L+ MY++ G L +AR +FD +P R+V
Sbjct: 130 LKACVRSADFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAGDLENARKVFDRVPERNV 188

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
           VSW++M+ G  + G+ EE L +  EMR  ++ PSE  M+S+++  A +  +  G+ IH  
Sbjct: 189 VSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGS 248

Query: 198 VVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           V+      K G++    I+ +L+DMY+KC  +  A+++F+ L    +V WT MI GY + 
Sbjct: 249 VI------KYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQN 302

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
               + ++LF      ++ P+ +TI ++I     +  L LG+ +HA  ++ G   S  + 
Sbjct: 303 KRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVR 362

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           NALVDMY KC+ +  A ++F  +  KDV+ WN++++ Y++    +++  LF  M++  + 
Sbjct: 363 NALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGIS 422

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           P+ +++V  LS C     L +GK  HTY  K     ++ + TAL+++Y+KC D+  A R+
Sbjct: 423 PDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRV 482

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F++   R+   W+AM+ GYGM G    ++  F +M +  + PN + F  +L+ACSH G+V
Sbjct: 483 FNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMV 542

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           T GK  FD M     + P ++HY CMVD++ RAG L+EA E I++MP++  + VWG+ L 
Sbjct: 543 TAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLH 602

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
             KLH     GE A  ++  + P+   + VLMSN+Y    RW+    +RR M+E  + K 
Sbjct: 603 GCKLHSRLEFGEEAIKKMAALHPETPDFYVLMSNLYTSYGRWDKSQTIRRWMQEQGLVKL 662

Query: 614 PGFSSV 619
           PG SSV
Sbjct: 663 PGCSSV 668



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/444 (31%), Positives = 239/444 (53%), Gaps = 9/444 (2%)

Query: 112 LIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPS 171
           L+  Y+  G L SAR + D  P  D  ++  M+      G   +A+ + R+MR      +
Sbjct: 61  LLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAA 120

Query: 172 EVAMISMVSLFADV--ADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           +  ++  ++L A V  AD   G+ +H  VV+    +     +  +L+DMY+K G+L  A+
Sbjct: 121 QADVVLSLALKACVRSADFRYGRRLHCDVVKAGGADGF---VMNSLVDMYAKAGDLENAR 177

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           ++F+R+ + +VVSWT M+SG I+     EG+ LF EM ++NV PSE T++S++  C  +G
Sbjct: 178 KVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLG 237

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
           GL  G+W+H  +++ G   +  ++ +L+DMY KC ++  AR +FD ++  D+++W A+I 
Sbjct: 238 GLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIV 297

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG-LE 408
            Y Q      A +LF+H K   + PN VT+  ++S   +   L +G+ +H    K G +E
Sbjct: 298 GYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTME 357

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            DV+ + ALVDMYAKC  +  A  +F   + +D+  WN+MMAGY  +G   E+L+ F  M
Sbjct: 358 SDVV-RNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRM 416

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
              G+ P+ I+ +  L+AC     +  GK  F         +  I     +++L  +   
Sbjct: 417 RMQGISPDAISVVNALSACVCLADLHIGKG-FHTYAIKYAFMSNIYVNTALLNLYSKCAD 475

Query: 529 LDEAHEMIKSMPLRPNMIVWGALL 552
           L  A  +   M  R N + W A++
Sbjct: 476 LPSAQRVFNDMTDR-NSVTWSAMI 498



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 225/436 (51%), Gaps = 21/436 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + S+++  I+N      L ++  MR++      +T+ ++L ACA +   H G+ IHG  I
Sbjct: 191 WTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVI 250

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL  ++++S +L+ MY++C  +  AR +FDE+   D+V W+ MI GY +   P +AL+
Sbjct: 251 KYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQ 310

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV----AIATA 214
           +    +F+ I P+ V + +++S  A +  + LG+++HA  V      KLG      +  A
Sbjct: 311 LFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGV------KLGTMESDVVRNA 364

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+DMY+KC  L  A  +F R+    VV+W  M++GY      NE + LF  M  + + P 
Sbjct: 365 LVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPD 424

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            I++++ +  C  +  L +GK  H Y ++  F  ++ +  AL+++Y KC ++ SA+ +F+
Sbjct: 425 AISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFN 484

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M  ++ + W+A+I  Y        + +LF  M    + PNEV    +LS C+  G +  
Sbjct: 485 DMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTA 544

Query: 395 GKWLHTYIEKQGLEVDVILK----TALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMM 449
           GK    Y +      ++         +VD+ A+ G++  A        I   I +W + +
Sbjct: 545 GK---EYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFL 601

Query: 450 AGYGMHG---CGEEAL 462
            G  +H     GEEA+
Sbjct: 602 HGCKLHSRLEFGEEAI 617



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 2/219 (0%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           +I  +  +NS++  Y +N   + +L ++  MR  G   D  ++   L AC  +   H+GK
Sbjct: 386 LIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGK 445

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
             H +AIK     + YV+ AL+ +YS+C  L SA+ +F++M +R+ V+WS MI GY   G
Sbjct: 446 GFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQG 505

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
               ++++  EM   +I P+EV   S++S  +    V  GK     + R+       +  
Sbjct: 506 DSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITP-SMKH 564

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVS-WTVMISG 249
              ++D+ ++ GNL  A +    +   + +S W   + G
Sbjct: 565 YACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHG 603


>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 584

 Score =  370 bits (949), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 211/582 (36%), Positives = 320/582 (54%), Gaps = 60/582 (10%)

Query: 57  NIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMY 116
            I     K  S+  N+   + L++C     T   K+IH   I  G   D +++   ++ Y
Sbjct: 13  QITTVTTKFKSKNSNYKTLSALQSCKS---TEDLKKIHAQLIITGQIKDTFIATKTVESY 69

Query: 117 SECGSLVSAR------YLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRP 170
           +     VSAR      ++F  +   D  SW+TMIRG+     PE+ALE    MR   +  
Sbjct: 70  A-----VSARNIDYAFWVFVGINYPDSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVEL 124

Query: 171 SEVAMISMVSLFADVADVDLGKAIHACVVR--NCKDEKLGVAIATALIDMYSKCGNLAYA 228
           ++   + ++  +        G+ +H  +V+   C D    V    ALI MY KCG++  A
Sbjct: 125 NKFTFLFVLKAYGLRPSYQEGRIVHGKLVKVGFCYD----VFTRNALIHMYLKCGSITDA 180

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
             LF+ +  ++VV+W  MI+G   C +     RLF EM E NV                 
Sbjct: 181 HLLFDEMPNHNVVTWNTMITGCFGCGDTERARRLFGEMPERNV----------------- 223

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
                G W                 NA+V  Y K   +  AR+LFD M  +DV+ W ++I
Sbjct: 224 -----GSW-----------------NAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMI 261

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
           SAY Q     +A ELF  M ++ V  + + +  +LS C + GAL+MG+W+H Y+++  L 
Sbjct: 262 SAYVQNGRAAEALELFKEMMLAGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLR 321

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            DV L TALVDMYAKCG ++ A+ +F+    +++C WNAM++G  +HG G  AL  F  M
Sbjct: 322 NDVFLDTALVDMYAKCGCIDTAFGVFNTMPRKNLCSWNAMLSGLAIHGHGFAALELFKQM 381

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
           E +GV PN ITF+ +L+ACSH G V EG   F++M     + PK+EHYGCMVD+L R GL
Sbjct: 382 ESTGVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCRQGL 441

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNI 588
           ++EA EMI++MPL PN+++WGALL A K+H   ++GE     I ++  ++ G  VL+SNI
Sbjct: 442 INEAKEMIRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVGYIQKLVSEDGGCYVLLSNI 501

Query: 589 YAVANRWNDVAGVRRVMKEIRVKKE-PGFSSVEVNGLVHKFI 629
           +A  ++WN+V   R++MK++ V+K+ PG+SS+E++ +VH F 
Sbjct: 502 FAAKSQWNEVEKTRKMMKQMGVEKKIPGYSSIELDSVVHDFF 543



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 144/483 (29%), Positives = 231/483 (47%), Gaps = 51/483 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++  +++   P  AL  Y  MR+ G E++ FT   +LKA         G+ +HG  +
Sbjct: 94  WTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKLV 153

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   D +  NALI MY +CGS+  A  LFDEMPN +VV+W+TMI G    G  E A  
Sbjct: 154 KVGFCYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTERARR 213

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  EM      P                             RN       V    A++  
Sbjct: 214 LFGEM------PE----------------------------RN-------VGSWNAVVGG 232

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSK G++  A+ LF+ + +  VVSW  MIS Y++     E + LF EM+   V    I I
Sbjct: 233 YSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMMLAGVSADSIII 292

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +G L +G+W+HAY+ R+     + +  ALVDMY KC  I +A  +F+ M  
Sbjct: 293 TSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFGVFNTMPR 352

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K++  WNA++S  A       A ELF  M+ + V PN++T V +LS C+  G++E G   
Sbjct: 353 KNLCSWNAMLSGLAIHGHGFAALELFKQMESTGVGPNDITFVAVLSACSHIGSVEEGWKK 412

Query: 399 HTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMHG 456
              ++K+  +   V     +VD+  + G +N A  +  +  +  ++ +W A++    +HG
Sbjct: 413 FNQMDKEFNITPKVEHYGCMVDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVHG 472

Query: 457 ---CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
               GE+ + +   +    V  +G  ++ L N  +      E +    KM+  +G+  KI
Sbjct: 473 YTNVGEDVVGYIQKL----VSEDGGCYVLLSNIFAAKSQWNEVEKT-RKMMKQMGVEKKI 527

Query: 514 EHY 516
             Y
Sbjct: 528 PGY 530


>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 588

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 202/550 (36%), Positives = 310/550 (56%), Gaps = 24/550 (4%)

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYL------FDEMPNRDVVSWSTMIRGYHRGGLP 153
            GL  D + S+ LI     C +L  +RYL         + N +  SW+  IRG+     P
Sbjct: 4   TGLVLDPFASSRLIAF---C-ALSESRYLNYCVKILKGIENPNAFSWNVTIRGFSESENP 59

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE-KLGVAIA 212
           ++A+   ++M       S     +   LF   AD+ L    H  +    K   +L   + 
Sbjct: 60  KDAVLAYKQMLRRGCCESRPDHFTYPVLFKVCADLRLNSLGHMILGHVFKLRLELVSHVH 119

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            A I M++ CG +  A+++F+      +VSW  +I+GY +  E  + + ++  M  E V 
Sbjct: 120 NASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVK 179

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR-- 330
           P ++T++ L+  C  +G L  GK  + Y+  NG   ++ +ANAL+DM+ KC +I  AR  
Sbjct: 180 PDDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRI 239

Query: 331 -----------TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
                       LFD M+ KDV++WNA+I    QA     A  LF  M+ S   P+E+TM
Sbjct: 240 FDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITM 299

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
           +  LS C++ GAL++G W+H YIEK  L ++V L T+LVDMYAKCG+++ A  +F     
Sbjct: 300 IHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAKCGNISEALCVFHGIQT 359

Query: 440 RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           R+   + A++ G  +HG    A+ +F +M  +G+ P+ ITFIGLL+AC H G++  G+  
Sbjct: 360 RNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDY 419

Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK 559
           F +M     L P+++HY  MVDLLGRAGLL+EA ++++SMP+  +  VWGALL   ++H 
Sbjct: 420 FSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEADAAVWGALLFGCRMHG 479

Query: 560 NPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           N  +GE AA ++LE++P + G  VL+  +Y  AN W D    RR+M E  V+K PG SS+
Sbjct: 480 NVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSI 539

Query: 620 EVNGLVHKFI 629
           EVNG+V +FI
Sbjct: 540 EVNGIVSEFI 549



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 142/455 (31%), Positives = 243/455 (53%), Gaps = 25/455 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNG---SEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +N  +  + ++  P  A+  Y  M + G   S  D+FT P + K CA + +  LG  I G
Sbjct: 46  WNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPDHFTYPVLFKVCADLRLNSLGHMILG 105

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              K  L+  ++V NA I M++ CG + +AR +FDE P RD+VSW+ +I GY + G  E+
Sbjct: 106 HVFKLRLELVSHVHNASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEK 165

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+EV + M    ++P +V MI +VS  A + D++ GK  +  V  N    ++ + +A AL
Sbjct: 166 AIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEYVKAN--GLRMTIPLANAL 223

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVS-------------WTVMISGYIRCNEINEGVRL 262
           +DM+SKCG++  A+++F+ L + ++VS             W  MI G ++     + + L
Sbjct: 224 MDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALAL 283

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F EM   N  P EIT++  +  C  +G L +G W+H YI ++    ++A+  +LVDMY K
Sbjct: 284 FQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAK 343

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C  I  A  +F G+++++ + + A+I   A       A   F  M  + + P+E+T +GL
Sbjct: 344 CGNISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGL 403

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILK--TALVDMYAKCGDVNGAYRLF-SEAIY 439
           LS C   G ++ G+   + + K    ++  LK  + +VD+  + G +  A +L  S  + 
Sbjct: 404 LSACCHGGMIQTGRDYFSQM-KSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPME 462

Query: 440 RDICMWNAMMAGYGMHG---CGEEALIFFVDMERS 471
            D  +W A++ G  MHG    GE+A    ++++ S
Sbjct: 463 ADAAVWGALLFGCRMHGNVKLGEKAAKKLLELDPS 497



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 167/331 (50%), Gaps = 17/331 (5%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  +N L+  Y K  +   A+ +Y  M   G + D+ T+  ++ +CA +   + GKE
Sbjct: 144 VRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKE 203

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY-------------LFDEMPNRDVVS 139
            + +   NGL     ++NAL+ M+S+CG +  AR              LFD+M  +DVV 
Sbjct: 204 FYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDVVM 263

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           W+ MI G  +    ++AL + +EM+  +  P E+ MI  +S  + +  +D+G  IH  + 
Sbjct: 264 WNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIE 323

Query: 200 RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
           ++     L VA+ T+L+DMY+KCGN++ A  +F+ +   + +++T +I G     + +  
Sbjct: 324 KH--SLSLNVALGTSLVDMYAKCGNISEALCVFHGIQTRNSLTYTAIIGGLALHGDASTA 381

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK-WLHAYILRNGFEFSLAMANALVD 318
           +  F EMI+  + P EIT + L+  C   G +Q G+ +      R      L   + +VD
Sbjct: 382 ISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVD 441

Query: 319 MYGKCREIRSARTLFDGMK-SKDVMIWNAVI 348
           + G+   +  A  L + M    D  +W A++
Sbjct: 442 LLGRAGLLEEADKLMESMPMEADAAVWGALL 472


>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 609

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 207/591 (35%), Positives = 331/591 (56%), Gaps = 30/591 (5%)

Query: 54  SALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG-FAIKNGLDGDAYVSNAL 112
           S   I+  +  N +    F + ++LK C     T   ++IH  F I +      +  N L
Sbjct: 4   SKHKIFKTINTNTNHSPIFLLLSLLKQCPS---TKTLQQIHTQFTIHS-----IHKPNHL 55

Query: 113 IQMYSECGSLVSARYLFDEM-PNRDVVSWSTMIRG----YHRGGLPEEALEVMREMRFMD 167
           +           +  +F  + P+ +  +++ M+R     +H   L    L +  +M+ ++
Sbjct: 56  LSQSISLKDFTYSTLIFSHITPHPNDYAFNIMLRATTTTWHDYPL---TLHLYHQMKTLN 112

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCG 223
           I P+      +    A++ ++ + +  H      C+  KLG+        +++ MY +CG
Sbjct: 113 ISPNNFTFPFVFLACANLEEIRMARLAH------CEVFKLGLDNDHHTVNSMVTMYFRCG 166

Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF-PSEITILSLI 282
               A+++F+ + +  +VSW  ++SGY +     E V +F  + EE+ F P E++++S++
Sbjct: 167 ENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVL 226

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
             CG +G L+LG+W+  +++  G + +  + +AL+ MY KC E+ S+R +FDGM S+D +
Sbjct: 227 GACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFI 286

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
            WNA ISAYAQ    D+A  LF  MK + V PN+VT+  +LS C   GAL++GK +  Y 
Sbjct: 287 TWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYA 346

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
             +GL+ D+ + TAL+DMYAKCG +  A R+F++   ++   WNAM++    HG  +EAL
Sbjct: 347 THRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEAL 406

Query: 463 IFFVDMERSG--VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
             F  M   G   +PN ITF+ LL+AC HAGLV EG  +FD M    GLVPKIEHY CMV
Sbjct: 407 SLFERMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMV 466

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYG 580
           DLL RAG L EA ++I+ MP +P+ +  GAL +A +  KN  +GE     +LE++P N G
Sbjct: 467 DLLSRAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSG 526

Query: 581 YNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             ++ S IY   N W+D A +R +M+E  V K PG S +EV   + +F+ G
Sbjct: 527 NYIISSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSG 577



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 210/414 (50%), Gaps = 57/414 (13%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRK-NGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           L  +NSL++ Y K      A+ ++  +R+ +G E D  ++ ++L AC ++    LG+ + 
Sbjct: 183 LVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVE 242

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           GF ++ G+  ++Y+ +ALI MYS+CG LVS+R +FD MP+RD ++W+  I  Y + G+ +
Sbjct: 243 GFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMAD 302

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           EA+ +   M+   + P++V + +++S  A +  +DLGK +        +  +  + +ATA
Sbjct: 303 EAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATH--RGLQHDIFVATA 360

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE--NVF 272
           LIDMY+KCG+L  A+++FN + + +  SW  MIS      +  E + LF  M +E  +  
Sbjct: 361 LIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSAR 420

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P++IT +SL+  C           +HA ++  G+         L DM           TL
Sbjct: 421 PNDITFVSLLSAC-----------VHAGLVDEGYR--------LFDMMS---------TL 452

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F G+  K +  ++ ++   ++A  + +A+++   M     +P+ VT+  L S C     +
Sbjct: 453 F-GLVPK-IEHYSCMVDLLSRAGHLYEAWDVIEKM---PEKPDNVTLGALHSACQRKKNV 507

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
           ++G+                    ++ M  +    N    + S  IY ++ MW+
Sbjct: 508 DIGE-------------------RVIQMLLELDPSNSGNYIISSKIYENLNMWD 542


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 203/609 (33%), Positives = 343/609 (56%), Gaps = 8/609 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  ++++V+ +  NN    AL  +  M +NG   + +      +AC+      +G  I G
Sbjct: 133 LISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFG 192

Query: 96  FAIKNG-LDGDAYVSNALIQMYSEC-GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           F +K G L  D  V   LI M+ +  G LVSA  +F++MP R+ V+W+ MI    + G  
Sbjct: 193 FVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYA 252

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            EA+++  EM      P    +  ++S  A++  + LG+ +H+  +R+     L   +  
Sbjct: 253 GEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRH--GLTLDRCVGC 310

Query: 214 ALIDMYSKC---GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE-GVRLFAEMIEE 269
            LI+MY+KC   G++  A+++F+++  ++V SWT MI+GY++    +E  + LF  MI  
Sbjct: 311 CLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILT 370

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
           +V P+  T  S +  C  +  L++G+ +  + ++ GF     +AN+L+ MY +   I  A
Sbjct: 371 HVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDA 430

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           R  FD +  K+++ +N VI AYA+    ++A ELF  ++   +  +  T   LLS     
Sbjct: 431 RKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASI 490

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           G +  G+ +H  + K GL+++  +  AL+ MY++CG++  A+++F +   R++  W +++
Sbjct: 491 GTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSII 550

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
            G+  HG   +AL  F  M   GV+PN +T+I +L+ACSH GLV EG   F  M    G+
Sbjct: 551 TGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGV 610

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
           +P++EHY CMVD+LGR+G L EA + I SMP + + +VW   L A ++H N  +G+ AA 
Sbjct: 611 IPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAK 670

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            I+E EP +    +L+SN+YA  ++W++V+ +R+ MKE  + KE G S VEV   VHKF 
Sbjct: 671 MIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSWVEVENKVHKFY 730

Query: 630 RGGMVNWKS 638
            G   + K+
Sbjct: 731 VGDTSHPKA 739



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 150/554 (27%), Positives = 261/554 (47%), Gaps = 22/554 (3%)

Query: 28  SYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           ++TN  NPLT     +   I N +   A++    M   GS  D  T    LK C +    
Sbjct: 27  TFTNP-NPLT---GRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSF 82

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM-PNRDVVSWSTMIRG 146
            +G  +H    ++ L  D+   N+LI +YS+CG    A  +F  M  +RD++SWS M+  
Sbjct: 83  DIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSC 142

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           +    +   AL    +M      P+E    +     +    V +G +I   VV+    + 
Sbjct: 143 FANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQS 202

Query: 207 LGVAIATALIDMYSKC-GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
             V +   LIDM+ K  G+L  A ++F ++ + + V+WT+MI+  ++     E + LF E
Sbjct: 203 -DVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLE 261

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR- 324
           MI     P   T+  +I  C  +  L LG+ LH+  +R+G      +   L++MY KC  
Sbjct: 262 MILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSV 321

Query: 325 --EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID-KAFELFIHMKVSKVRPNEVTMVG 381
              + +AR +FD +   +V  W A+I+ Y Q    D +A +LF  M ++ V PN  T   
Sbjct: 322 DGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSS 381

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
            L  C    AL +G+ + T+  K G      +  +L+ MYA+ G ++ A + F     ++
Sbjct: 382 TLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN 441

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           +  +N ++  Y  +   EEAL  F ++E  G+  +  TF  LL+  +  G + +G+ +  
Sbjct: 442 LISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHA 501

Query: 502 KMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
           +++  GL L   +     ++ +  R G ++ A ++ + M  R N+I W +++     H  
Sbjct: 502 RVIKSGLKLNQSV--CNALISMYSRCGNIESAFQVFEDMEDR-NVISWTSIITGFAKHG- 557

Query: 561 PSMGEIAATQILEI 574
                  ATQ LE+
Sbjct: 558 ------FATQALEL 565


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 198/601 (32%), Positives = 326/601 (54%), Gaps = 4/601 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +++++   ++N+     L ++  M+K G  V   T  ++ ++CA +    LG ++HG A+
Sbjct: 243 WSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHAL 302

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K     D  +  A + MY +C +L  A+ LF+ +PN ++ S++ +I GY R     EAL 
Sbjct: 303 KTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALG 362

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN-CKDEKLGVAIATALID 217
           + R ++   +   EV++       A +     G  +H   +++ C+     + +A A++D
Sbjct: 363 MFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSN---ICVANAILD 419

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY KCG L  A  +F  +     VSW  +I+ + +     + + LF  M++  + P E T
Sbjct: 420 MYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFT 479

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             S++  C     L  G  +H  I+++       +  AL+DMY KC  +  A  L D + 
Sbjct: 480 YGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLA 539

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            + V+ WNA+IS ++     ++A + F  M    V P+  T   +L  C     +E+GK 
Sbjct: 540 EQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQ 599

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H  I K+ L+ D  + + LVDMY+KCG++     +F +A  RD   WNAM+ GY  HG 
Sbjct: 600 IHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGL 659

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           GEEAL  F  M+   VKPN  TF+ +L AC H GLV +G   F  M+   GL P++EHY 
Sbjct: 660 GEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYS 719

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           C+VD++GR+G + +A E+I+ MP   + ++W  LL+  K+H N  + E AA  IL++EP+
Sbjct: 720 CVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPE 779

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWK 637
           +    VL+SNIYA A  WN+V  +R++M+   +KKEPG S +E+   VH F+ G   + +
Sbjct: 780 DSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPR 839

Query: 638 S 638
           S
Sbjct: 840 S 840



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 266/523 (50%), Gaps = 4/523 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +NSL++ Y+ N      ++++  M + G+  D  T   +LK+C+ +     G +IHG
Sbjct: 139 VVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHG 198

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+K G D D    +AL+ MY++C  L  +   F  MP ++ VSWS +I G  +      
Sbjct: 199 LAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRG 258

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            LE+ +EM+   +  S+    S+    A ++ + LG  +H   ++   D    V I TA 
Sbjct: 259 GLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKT--DFGTDVVIGTAT 316

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY KC NL+ A++LFN L  +++ S+  +I GY R ++  E + +F  + +  +   E
Sbjct: 317 LDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDE 376

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +++      C  + G   G  +H   +++  + ++ +ANA++DMYGKC  +  A  +F+ 
Sbjct: 377 VSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEE 436

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M S+D + WNA+I+A+ Q    +K   LF+ M  S + P+E T   +L  C    AL  G
Sbjct: 437 MVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCG 496

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H  I K  L +D  +  AL+DMY+KCG +  A +L      + +  WNA+++G+ + 
Sbjct: 497 MEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQ 556

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
              EEA   F  M   GV P+  T+  +L+ C++   V  GK +  +++    L      
Sbjct: 557 KQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKK-ELQSDAYI 615

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
              +VD+  + G + +   + +  P R + + W A++     H
Sbjct: 616 SSTLVDMYSKCGNMQDFQLIFEKAPNR-DFVTWNAMVCGYAQH 657



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 252/467 (53%), Gaps = 15/467 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  YN+++  Y +++K   AL ++  ++K+G  +D  ++    +ACA +     G ++HG
Sbjct: 341 LQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHG 400

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            ++K+    +  V+NA++ MY +CG+LV A  +F+EM +RD VSW+ +I  + + G  E+
Sbjct: 401 LSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEK 460

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA--IAT 213
            L +   M    + P E    S++   A    ++ G  IH  ++++    +LG+   +  
Sbjct: 461 TLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKS----RLGLDSFVGI 516

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALIDMYSKCG +  A++L +RL + +VVSW  +ISG+    +  E  + F++M+E  V P
Sbjct: 517 ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDP 576

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T  +++  C  +  ++LGK +HA I++   +    +++ LVDMY KC  ++  + +F
Sbjct: 577 DNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIF 636

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           +   ++D + WNA++  YAQ    ++A ++F +M++  V+PN  T + +L  C   G +E
Sbjct: 637 EKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVE 696

Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAG 451
            G  + H+ +   GL+  +   + +VD+  + G V+ A  L     +  D  +W  +++ 
Sbjct: 697 KGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSI 756

Query: 452 YGMHG---CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
             +HG     E+A    + +E      +   ++ L N  ++AG+  E
Sbjct: 757 CKIHGNVEVAEKAAYSILQLE----PEDSAAYVLLSNIYANAGMWNE 799



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 150/576 (26%), Positives = 273/576 (47%), Gaps = 41/576 (7%)

Query: 47  IKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDA 106
            ++  P   L I  F     +     T   I + C+       GK+ H   I        
Sbjct: 18  FQSKSPFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTV 77

Query: 107 YVSNALIQMYSEC-------------------------------GSLVSARYLFDEMPNR 135
           +V+N LIQMY +C                               G +  A+ LFD MP R
Sbjct: 78  FVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPER 137

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
           DVVSW+++I GY   G   + ++V  +M  M           ++   + + D   G  IH
Sbjct: 138 DVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIH 197

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
              V+   D    V   +AL+DMY+KC  L  + Q F+ + + + VSW+ +I+G ++ ++
Sbjct: 198 GLAVKMGFD--CDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDD 255

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
           +  G+ LF EM +  V  S+ T  S+   C  +  L+LG  LH + L+  F   + +  A
Sbjct: 256 LRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTA 315

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
            +DMY KC  +  A+ LF+ + + ++  +NA+I  YA++    +A  +F  ++ S +  +
Sbjct: 316 TLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLD 375

Query: 376 EVTMVGLLSLCTE-AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           EV++ G    C    G LE G  +H    K   + ++ +  A++DMY KCG +  A  +F
Sbjct: 376 EVSLSGAFRACAVIKGDLE-GLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVF 434

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
            E + RD   WNA++A +  +G  E+ L  FV M +SG++P+  T+  +L AC+    + 
Sbjct: 435 EEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALN 494

Query: 495 EGKSVFDKMVHG-LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            G  + ++++   LGL   +     ++D+  + G++++A ++   +     ++ W A+++
Sbjct: 495 CGMEIHNRIIKSRLGLDSFVGI--ALIDMYSKCGMMEKAEKLHDRLA-EQTVVSWNAIIS 551

Query: 554 ASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMSN 587
              L K     +   +++LE  ++P N+ Y  ++  
Sbjct: 552 GFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDT 587


>gi|193848497|gb|ACF22688.1| vegetative storage protein [Brachypodium distachyon]
          Length = 587

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 189/544 (34%), Positives = 319/544 (58%), Gaps = 5/544 (0%)

Query: 90  GKEIHGFAIKNGLD-GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           G+ +H  AI++     DA+V+ AL+ MY++C  +V +   ++     D+V  ++M+ GY 
Sbjct: 8   GRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMVTGYE 67

Query: 149 RGGLPEEALEVM-REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
           +  +  EALE   R +      PS V ++S++S  A + DV  G+A HA V+RN  + + 
Sbjct: 68  QNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRN--NFEY 125

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            + +  A++  Y + G +  A++LF  + +  VV+W+ M++GY++  +I E +  + +M+
Sbjct: 126 DLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKKMV 185

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
           E  + P+ +T++S++  C     ++ G+ +H   ++ G E  + +A ALVDMY KC    
Sbjct: 186 EAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSCHE 245

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            A  LF  M  KD + W  VIS + Q    D++  +F  M      P+ VTMV +L+ C+
Sbjct: 246 EAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAACS 305

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
           E+G +     LH Y+   G    + +  ALVD+Y+KCG++  A R+F  A+ +D+ +W++
Sbjct: 306 ESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLWSS 365

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           M++GYG+HG G++A+  F  M  S VKPN +TF+ +L+ACSH+GLV EGK +F+ M    
Sbjct: 366 MISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQVY 425

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
           G+VP   H+  MVDLLGRAG L EA +++     R +   W ALLAA + H +  M E+ 
Sbjct: 426 GVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNG-RADAHTWCALLAACRAHHDTEMSEVV 484

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHK 627
           A ++L+++P + GY  L++NIY     W+     R ++++  + K PG S+VE+N ++H 
Sbjct: 485 AAKLLKLDPDHAGYYNLLNNIYTFDENWSSAKENRNIIRDRGLNKVPGCSAVELNNVMHT 544

Query: 628 FIRG 631
           F  G
Sbjct: 545 FTAG 548



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 239/449 (53%), Gaps = 8/449 (1%)

Query: 40  NSLVTSYIKNNKPSSALNIYA-FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
            S+VT Y +N   + AL  ++  +   G      T+ +++ A AQ+     G+  H F I
Sbjct: 60  TSMVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVI 119

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +N  + D  + NA++  Y   G++ +AR LF+ M  +DVV+WS M+ GY + G   EAL 
Sbjct: 120 RNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALT 179

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALID 217
             ++M    I+P+ V ++S+V   +   D++ G+ +H   V+  C   +L + +ATAL+D
Sbjct: 180 AYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGC---ELEMTVATALVD 236

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY KC     A QLF R+++   V+W V+ISG+ +    +E +R+F  M+    FP  +T
Sbjct: 237 MYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVT 296

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++ ++  C   G ++    LH Y++  GF   + +A ALVD+Y KC  +  A  +F+   
Sbjct: 297 MVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAM 356

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KDV++W+++IS Y       +A ELF  M  S V+PN +T V +LS C+ +G ++ GK 
Sbjct: 357 EKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKR 416

Query: 398 L-HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
           +  +  +  G+  + +  +A+VD+  + G++  A +L       D   W A++A    H 
Sbjct: 417 IFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNGRADAHTWCALLAACRAHH 476

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLN 485
             E + +    + +  + P+   +  LLN
Sbjct: 477 DTEMSEVVAAKLLK--LDPDHAGYYNLLN 503



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 191/397 (48%), Gaps = 31/397 (7%)

Query: 14  RQCHAHIIKTHFKFSYTNIINPL-------------------------TRYNSLVTSYIK 48
           + CHA +I+ +F++    ++N +                           ++ +VT Y++
Sbjct: 112 QACHAFVIRNNFEYDLV-LVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQ 170

Query: 49  NNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYV 108
           +     AL  Y  M + G + +  T+ ++++AC+       G+ +H  A+K G + +  V
Sbjct: 171 SGDICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTV 230

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI 168
           + AL+ MY +C     A  LF  M  +D V+W+ +I G+ + GLP+E++ V + M F   
Sbjct: 231 ATALVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGP 290

Query: 169 RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYA 228
            P  V M+ +++  ++   +     +H  +V     +K  + +A AL+D+YSKCGNL  A
Sbjct: 291 FPDAVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDK--IFVAAALVDLYSKCGNLGCA 348

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
            ++F    +  VV W+ MISGY       + V LF  M+  +V P+ +T +S++  C   
Sbjct: 349 VRVFESAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHS 408

Query: 289 GGLQLGKWLHAYILR-NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
           G +Q GK +   + +  G   +    +A+VD+ G+  E++ A  L  G    D   W A+
Sbjct: 409 GLVQEGKRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNGRADAHTWCAL 468

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
           ++A    H  D      +  K+ K+ P+      LL+
Sbjct: 469 LAACRAHH--DTEMSEVVAAKLLKLDPDHAGYYNLLN 503


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  369 bits (948), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 197/600 (32%), Positives = 346/600 (57%), Gaps = 9/600 (1%)

Query: 39  YNSLVTSYIKNN-KPSSALNIYAFMRKNGSEV---DNFTIPTILKACAQVLMTHLGKEIH 94
           +NS++  +  N     S L +   M +NG      D  T+ T+L  CA+     LGK +H
Sbjct: 6   WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 65

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           G+A+K  LD +  ++NAL+ MYS+CG + +A+ +F    N++VVSW+TM+ G+   G   
Sbjct: 66  GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 125

Query: 155 EALEVMREMRF--MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
              +V+R+M     D++  EV +++ V +    + +   K +H   ++  ++      +A
Sbjct: 126 GTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLK--QEFVYNELVA 183

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            A +  Y+KCG+L+YA+++F+ +   +V SW  +I G+ + N+    +    +M    + 
Sbjct: 184 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 243

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P   T+ SL+  C  +  L+LGK +H +I+RN  E  L +  +++ +Y  C E+ + + L
Sbjct: 244 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 303

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FD M+ K ++ WN VI+ Y Q    D+A  +F  M +  ++   ++M+ +   C+   +L
Sbjct: 304 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSL 363

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
            +G+  H Y  K  LE D  +  +L+DMYAK G +  + ++F+    +    WNAM+ GY
Sbjct: 364 RLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGY 423

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
           G+HG  +EA+  F +M+R+G  P+ +TF+G+L AC+H+GL+ EG    D+M    GL P 
Sbjct: 424 GIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPN 483

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMI-KSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
           ++HY C++D+LGRAG LD+A  ++ + M    ++ +W +LL++ ++H+N  MGE  A ++
Sbjct: 484 LKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKL 543

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            E+EP+     VL+SN+YA   +W DV  VR+ M E+ ++K+ G S +E+N  V  F+ G
Sbjct: 544 FELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVG 603



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 192/360 (53%), Gaps = 8/360 (2%)

Query: 135 RDVVSWSTMIRGYHRGGLPEEAL----EVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
           R+ VSW++MIR +   G  EE+     E+M E       P    +++++ + A   ++ L
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           GK +H   V+   D++L   +  AL+DMYSKCG +  A+ +F   N  +VVSW  M+ G+
Sbjct: 61  GKGVHGWAVKLRLDKEL--VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGF 118

Query: 251 IRCNEINEGVRLFAEMIE--ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
               + +    +  +M+   E+V   E+TIL+ +  C     L   K LH Y L+  F +
Sbjct: 119 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 178

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
           +  +ANA V  Y KC  +  A+ +F G++SK V  WNA+I  +AQ++    + +  + MK
Sbjct: 179 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 238

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
           +S + P+  T+  LLS C++  +L +GK +H +I +  LE D+ +  +++ +Y  CG++ 
Sbjct: 239 ISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELC 298

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
               LF     + +  WN ++ GY  +G  + AL  F  M   G++  GI+ + +  ACS
Sbjct: 299 TVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 358



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 85/145 (58%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++T Y++N  P  AL ++  M   G ++   ++  +  AC+ +    LG+E H 
Sbjct: 312 LVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHA 371

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +A+K+ L+ DA+++ +LI MY++ GS+  +  +F+ +  +   SW+ MI GY   GL +E
Sbjct: 372 YALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKE 431

Query: 156 ALEVMREMRFMDIRPSEVAMISMVS 180
           A+++  EM+     P ++  + +++
Sbjct: 432 AIKLFEEMQRTGHNPDDLTFLGVLT 456


>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 212/611 (34%), Positives = 340/611 (55%), Gaps = 16/611 (2%)

Query: 19  HIIKTHFKFSYTNIINPL-----TRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT 73
           H++K  FK  Y +++ PL     T   S +    K+ + S AL +   +           
Sbjct: 3   HLMKPLFK-RYYSLLTPLNLSDNTNPFSKILQLCKSGELSGALQLLKSIDPGEISAKPVL 61

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS-LVSARYLFDEM 132
             ++L+ C +VL  + G +IH   IK+GL+ D +V N+L+ +Y + G+     R +FD +
Sbjct: 62  YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 121

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
             +DV+SW++MI GY R G P  +LE+  +M    + P+   + +++   +++ D+ LG+
Sbjct: 122 FVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGR 181

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
             H  V+    D      IA+ALIDM+ +   L  A+QLF+ L +   + WT +IS   R
Sbjct: 182 IFHGVVLGRGFDSN--YVIASALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTR 239

Query: 253 CNEINEGVRLFAEMIEEN-VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
            +  +E +R F  M  ++ + P   T  +++  CG +G L+ GK +HA ++  GF  ++ 
Sbjct: 240 NDFFDEALRFFYSMQRDHGMCPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVV 299

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           + ++LVDMYGKC  +  ++ +FD M  K+ + W+A++  Y Q        ++F  M+   
Sbjct: 300 VESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME--- 356

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLH-TYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
            + +      +L  C    A+  GK +H  YI K G   DVI+++ALVD+YAKCG +  A
Sbjct: 357 -KVDLYCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWR-DVIVESALVDLYAKCGCIEYA 414

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
             +F +   R++  WN+M+ G+  +G GEEAL  F  M + G+KP+ I+FIG+L ACSH 
Sbjct: 415 QTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHR 474

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           GLV EG+  F  M    G+   IEHY CMVDLLGRAGLL+EA  +I++   R +  +W A
Sbjct: 475 GLVDEGREYFISMTKDYGIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAA 534

Query: 551 LLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRV 610
           LL A     N  + E  A +++E+EP  +   VL++N+Y    RWND   +RR+MK+  V
Sbjct: 535 LLGACTTCTNYEIAERIAKRVMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGV 594

Query: 611 KKEPGFSSVEV 621
            K PG S +E 
Sbjct: 595 NKMPGKSWIET 605



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 241/466 (51%), Gaps = 38/466 (8%)

Query: 15  QCHAHIIKTHFKFS----------YTNIIN--PLTR-------------YNSLVTSYIKN 49
           Q HAH+IK+  +F           Y  +    P TR             + S+++ Y++ 
Sbjct: 80  QIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRV 139

Query: 50  NKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVS 109
            KP ++L ++  M   G E + FT+  ++KAC+++    LG+  HG  +  G D +  ++
Sbjct: 140 GKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIA 199

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDI 168
           +ALI M+    +L  AR LFDE+   D + W+++I    R    +EAL     M R   +
Sbjct: 200 SALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGM 259

Query: 169 RPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALIDMYSKCGNLA 226
            P      ++++   ++  +  GK +HA V+    C +    V + ++L+DMY KCG++ 
Sbjct: 260 CPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGN----VVVESSLVDMYGKCGSVG 315

Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
            ++++F+R+   + VSW+ ++ GY +  +    +++F +M + +++       +++  C 
Sbjct: 316 ESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLY----CFGTILRTCA 371

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
            +  ++ GK +H   +R G    + + +ALVD+Y KC  I  A+T+FD M  ++++ WN+
Sbjct: 372 GLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNS 431

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-WLHTYIEKQ 405
           +I  +AQ    ++A  +F  M    ++P+ ++ +G+L  C+  G ++ G+ +  +  +  
Sbjct: 432 MIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDY 491

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMA 450
           G++V +   + +VD+  + G +  A  L   + +R D  +W A++ 
Sbjct: 492 GIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLG 537


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 201/625 (32%), Positives = 352/625 (56%), Gaps = 27/625 (4%)

Query: 30  TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRK---------------NGSE----VD 70
           T ++  L   N+LV+ Y  +   S AL ++  M +               NG +     D
Sbjct: 216 TGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGDDGAFMPD 275

Query: 71  NFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFD 130
             T+ T+L  CA+     +GK +HG+A+K  LD +  V+NAL+ MYS+ G ++ ++ +F 
Sbjct: 276 VATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFK 335

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF--MDIRPSEVAMISMVSLFADVADV 188
              N++VVSW+TM+ G+   G      +++R+M     D++  EV +++ V +  D + +
Sbjct: 336 LNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVL 395

Query: 189 DLGKAIHACVVRN--CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
              K +H   ++     DE L    A A +  Y+KCG+L+YA+++F+ +   ++ SW  +
Sbjct: 396 PSLKELHCYSLKQEFVYDELL----ANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNAL 451

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           I GY + ++    +    +M    + P   T+ SL+  C  +  L+LGK +H +I+RN  
Sbjct: 452 IGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL 511

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
           E  L +  +++ +Y  C E+ + + LFD M+   ++ WN VI+ + Q    ++A  LF  
Sbjct: 512 ERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQ 571

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           M +  ++P  ++M+ +   C+   +L +G+  H Y  K  LE +  +  +++DMYAK G 
Sbjct: 572 MVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGA 631

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           +  + ++F+    +    WNAM+ GYGMHG  +EA+  F +M+R+G  P+ +TF+G+L A
Sbjct: 632 ITQSSKVFNGLKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTA 691

Query: 487 CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
           C+H+GL+ EG    D+M    GL P ++HY C++D+LGRAG LD A  +   M   P++ 
Sbjct: 692 CNHSGLLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVG 751

Query: 547 VWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMK 606
           +W +LL+  ++H+N  MGE  A ++  +EP+     VL+SN+YA   +W+DV  VR+ MK
Sbjct: 752 IWNSLLSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMK 811

Query: 607 EIRVKKEPGFSSVEVNGLVHKFIRG 631
           E+ ++K+ G S +E+NG V  F+ G
Sbjct: 812 EMSLRKDAGCSWIELNGKVFSFVVG 836



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 208/428 (48%), Gaps = 20/428 (4%)

Query: 77  ILKACAQVLMTHLGKEIHGF-AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           +L+A  +     +G++IH   +    L  D  +   +I MY+ CGS   +R  FD + ++
Sbjct: 90  LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           ++  W+ +I  Y R  L  E LE+  +M     + P       ++   A ++DV +G A+
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
           H  VV+    E L V    AL+  Y   G ++ A +LF+ + + ++VSW  MI       
Sbjct: 210 HGLVVKTGLVEDLFV--GNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMI------- 260

Query: 255 EINEGVRLFAEMIEENVF-PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
                 R+F++  ++  F P   T+++++  C     + +GK +H + ++   +  L + 
Sbjct: 261 ------RVFSDNGDDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVN 314

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV--SK 371
           NAL+DMY K   I  ++ +F    +K+V+ WN ++  ++    I   F+L   M      
Sbjct: 315 NALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSED 374

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           V+ +EVT++  + +C +   L   K LH Y  KQ    D +L  A V  YAKCG ++ A 
Sbjct: 375 VKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQ 434

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
           R+F     + +  WNA++ GY        +L   + M+ SG+ P+  T   LL+ACS   
Sbjct: 435 RVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLK 494

Query: 492 LVTEGKSV 499
            +  GK V
Sbjct: 495 SLRLGKEV 502



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/317 (22%), Positives = 141/317 (44%), Gaps = 24/317 (7%)

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILS------LIIECGFVGGLQLGKWLHAY 300
           IS +    ++++  R+  E   ++   S++ +L       L+   G    +++G+ +H  
Sbjct: 50  ISNFCETGDLDKSFRVVQEFAGDDESSSDVFLLVREALGLLLQASGKRKDIEMGRKIHHL 109

Query: 301 IL-RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
           +           +   ++ MY  C     +R+ FD ++SK++  WNAVIS+Y++     +
Sbjct: 110 VSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHE 169

Query: 360 AFELFIHMKVSKVR--PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
             E+FI M +SK    P+  T   ++  C     + +G  +H  + K GL  D+ +  AL
Sbjct: 170 VLEMFIKM-ISKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNAL 228

Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
           V  Y   G V+ A +LF     R++  WN+M+  +  +G            +     P+ 
Sbjct: 229 VSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG------------DDGAFMPDV 276

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK 537
            T + +L  C+    +  GK V    V  L L  ++     ++D+  + G + ++ +MI 
Sbjct: 277 ATVVTVLPVCAREREIGVGKGVHGWAVK-LSLDKELVVNNALMDMYSKWGCIIDS-QMIF 334

Query: 538 SMPLRPNMIVWGALLAA 554
            +    N++ W  ++  
Sbjct: 335 KLNNNKNVVSWNTMVGG 351


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 206/608 (33%), Positives = 333/608 (54%), Gaps = 17/608 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +  LV ++  + +    L     MR++G   D  T  T L +C        G  IH 
Sbjct: 110 LYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQ 169

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMIRGYHRGGLPE 154
             + + L+ D  VSNAL+ MY +CGSL  A+ +F +M   R+V+SWS M   +   G   
Sbjct: 170 MVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVW 229

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           EAL   R M  + I+ ++ AM++++S  +  A V  G+ IH+C+  +  + +L   +A A
Sbjct: 230 EALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESEL--LVANA 287

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQ--NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           ++ MY +CG +  A+++F+ +++    VVSW +M+S Y+  +   + ++L+  M    + 
Sbjct: 288 VMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM---QLR 344

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
             ++T +SL+  C     + LG+ LH  I+ +  E ++ + NALV MY KC     AR +
Sbjct: 345 ADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKCGSHTEARAV 404

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM-------KVSKVRPNEVTMVGLLSL 385
           FD M+ + ++ W  +ISAY +   + +A  LF  M          +V+P+ +  V +L+ 
Sbjct: 405 FDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNA 464

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICM 444
           C +  ALE GK +       GL  D  + TA+V++Y KCG++    R+F     R D+ +
Sbjct: 465 CADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQL 524

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           WNAM+A Y   G   EAL  F  ME  GV+P+  +F+ +L ACSH GL  +GKS F  M 
Sbjct: 525 WNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMT 584

Query: 505 HGLGLVPK-IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
                V + I+H+GC+ DLLGR G L EA E ++ +P++P+ + W +LLAA + H++   
Sbjct: 585 TEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKR 644

Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
            +  A ++L +EP+     V +SNIYA   +W+ VA VR+ M E  VKKE G S++E+  
Sbjct: 645 AKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKKERGVSTIEIGK 704

Query: 624 LVHKFIRG 631
            +H F  G
Sbjct: 705 YMHDFATG 712



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 152/505 (30%), Positives = 267/505 (52%), Gaps = 21/505 (4%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK-NGLDGDAYVSNALIQMYSECG 120
           + K     +N T   +L+ CA+      G++IH  A+K N L G+  + N ++ MY+ C 
Sbjct: 34  LEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCD 93

Query: 121 SLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
           S   A+  FD +  R++ SW+ ++  +   G  +E L  +  MR   +RP  V  I+ + 
Sbjct: 94  SPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALG 153

Query: 181 LFADVADVDLGKAIHACVVRNCKDEKLGV--AIATALIDMYSKCGNLAYAKQLFNRLNQN 238
              D   +  G  IH  VV    D +L +   ++ AL++MY KCG+L++AK++F ++ + 
Sbjct: 154 SCGDPESLRDGIRIHQMVV----DSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERT 209

Query: 239 -SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
            +V+SW++M   +     + E +R F  M+   +  ++  +++++  C     +Q G+ +
Sbjct: 210 RNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLI 269

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS--KDVMIWNAVISAYAQAH 355
           H+ I  +GFE  L +ANA++ MYG+C  +  AR +FD M    +DV+ WN ++SAY    
Sbjct: 270 HSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHND 329

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
               A +L+  M   ++R ++VT V LLS C+ A  + +G+ LH  I    LE +VI+  
Sbjct: 330 RGKDAIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGN 386

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF---VDMERSG 472
           ALV MYAKCG    A  +F +   R I  W  +++ Y       EA   F   +++E++G
Sbjct: 387 ALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNG 446

Query: 473 ----VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
               VKP+ + F+ +LNAC+    + +GK V ++     GL         +V+L G+ G 
Sbjct: 447 SSQRVKPDALAFVTILNACADVSALEQGKMVSEQAA-SCGLSSDKAVGTAVVNLYGKCGE 505

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLA 553
           ++E   +   +  RP++ +W A++A
Sbjct: 506 IEEGRRIFDGVCSRPDVQLWNAMIA 530



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 178/343 (51%), Gaps = 8/343 (2%)

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           ++ MY+ C +   AK  F+ L Q ++ SWT +++ +    +  E +R    M ++ V P 
Sbjct: 85  IVSMYAHCDSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPD 144

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            +T ++ +  CG    L+ G  +H  ++ +  E    ++NAL++MY KC  +  A+ +F 
Sbjct: 145 AVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFA 204

Query: 335 GM-KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
            M ++++V+ W+ +  A+A    + +A   F  M +  ++  +  MV +LS C+    ++
Sbjct: 205 KMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQ 264

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS--EAIYRDICMWNAMMAG 451
            G+ +H+ I   G E ++++  A++ MY +CG V  A ++F   +   RD+  WN M++ 
Sbjct: 265 DGRLIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSA 324

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           Y  +  G++A+  +  M+   ++ + +T++ LL+ACS A  V  G+ V  K +    L  
Sbjct: 325 YVHNDRGKDAIQLYQRMQ---LRADKVTYVSLLSACSSAEDVGLGR-VLHKQIVNDELEK 380

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            +     +V +  + G   EA  +   M  R ++I W  +++A
Sbjct: 381 NVIVGNALVSMYAKCGSHTEARAVFDKMEQR-SIISWTTIISA 422



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 174/372 (46%), Gaps = 12/372 (3%)

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR-NGFEFSLAMANALVDMYGKC 323
           ++ ++ V     T   L+  C     L  G+ +H+  ++ N    +L + N +V MY  C
Sbjct: 33  DLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHC 92

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
                A+  FD ++ +++  W  +++A+A +    +       M+   VRP+ VT +  L
Sbjct: 93  DSPGDAKAAFDALEQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITAL 152

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDI 442
             C +  +L  G  +H  +    LE+D  +  AL++MY KCG ++ A R+F++    R++
Sbjct: 153 GSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKMERTRNV 212

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             W+ M   + +HG   EAL  F  M   G+K      + +L+ACS   LV +G+ +   
Sbjct: 213 ISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSC 272

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM--PLRPNMIVWGALLAASKLHKN 560
           +    G   ++     ++ + GR G ++EA ++  +M   LR +++ W  +L+A  +H +
Sbjct: 273 IALS-GFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALR-DVVSWNIMLSAY-VHND 329

Query: 561 PSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
                I   Q +++      Y  L+S   +  +      G+ RV+ +  V  E   + + 
Sbjct: 330 RGKDAIQLYQRMQLRADKVTYVSLLSACSSAED-----VGLGRVLHKQIVNDELEKNVIV 384

Query: 621 VNGLVHKFIRGG 632
            N LV  + + G
Sbjct: 385 GNALVSMYAKCG 396


>gi|18409250|ref|NP_564961.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75168871|sp|Q9C507.1|PP111_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial; Flags: Precursor
 gi|12325094|gb|AAG52503.1|AC018364_21 hypothetical protein; 27026-24663 [Arabidopsis thaliana]
 gi|12597785|gb|AAG60097.1|AC073178_8 PPR-repeat protein, putative [Arabidopsis thaliana]
 gi|332196793|gb|AEE34914.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 787

 Score =  369 bits (947), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 201/601 (33%), Positives = 341/601 (56%), Gaps = 8/601 (1%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  +++LV+S ++N +   AL ++  M  +G E D  T+ ++++ CA++    + + 
Sbjct: 164 VRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARS 223

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HG   +   D D  + N+L+ MYS+CG L+S+  +F+++  ++ VSW+ MI  Y+RG  
Sbjct: 224 VHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEF 283

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            E+AL    EM    I P+ V + S++S    +  +  GK++H   VR   D     +++
Sbjct: 284 SEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYE-SLS 342

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            AL+++Y++CG L+  + +   ++  ++V+W  +IS Y     + + + LF +M+ + + 
Sbjct: 343 LALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIK 402

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGF--EFSLAMANALVDMYGKCREIRSAR 330
           P   T+ S I  C   G + LGK +H +++R     EF   + N+L+DMY K   + SA 
Sbjct: 403 PDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF---VQNSLIDMYSKSGSVDSAS 459

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
           T+F+ +K + V+ WN+++  ++Q     +A  LF +M  S +  NEVT + ++  C+  G
Sbjct: 460 TVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIG 519

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           +LE GKW+H  +   GL+ D+   TAL+DMYAKCGD+N A  +F     R I  W++M+ 
Sbjct: 520 SLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMIN 578

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
            YGMHG    A+  F  M  SG KPN + F+ +L+AC H+G V EGK  F+ M    G+ 
Sbjct: 579 AYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVS 637

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           P  EH+ C +DLL R+G L EA+  IK MP   +  VWG+L+   ++H+   + +     
Sbjct: 638 PNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKND 697

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIR 630
           + +I   + GY  L+SNIYA    W +   +R  MK   +KK PG+S++E++  V +F  
Sbjct: 698 LSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGA 757

Query: 631 G 631
           G
Sbjct: 758 G 758



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 280/489 (57%), Gaps = 9/489 (1%)

Query: 54  SALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL--GKEIHGFAIKNGLDGDAYVSNA 111
           +A+++Y  +    +++  F  P++L+ACA     HL  G ++HG  IK G+D DA +  +
Sbjct: 83  AAIDLYHRLVSETTQISKFVFPSVLRACAGS-REHLSVGGKVHGRIIKGGVDDDAVIETS 141

Query: 112 LIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPS 171
           L+ MY + G+L  A  +FD MP RD+V+WST++      G   +AL + + M    + P 
Sbjct: 142 LLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPD 201

Query: 172 EVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQL 231
            V MIS+V   A++  + + +++H  + R   D  L   +  +L+ MYSKCG+L  ++++
Sbjct: 202 AVTMISVVEGCAELGCLRIARSVHGQITRKMFD--LDETLCNSLLTMYSKCGDLLSSERI 259

Query: 232 FNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL 291
           F ++ + + VSWT MIS Y R     + +R F+EMI+  + P+ +T+ S++  CG +G +
Sbjct: 260 FEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLI 319

Query: 292 QLGKWLHAYILRNGFEFSL-AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
           + GK +H + +R   + +  +++ ALV++Y +C ++    T+   +  ++++ WN++IS 
Sbjct: 320 REGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISL 379

Query: 351 YAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
           YA    + +A  LF  M   +++P+  T+   +S C  AG + +GK +H ++ +  +  D
Sbjct: 380 YAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-D 438

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
             ++ +L+DMY+K G V+ A  +F++  +R +  WN+M+ G+  +G   EA+  F  M  
Sbjct: 439 EFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYH 498

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
           S ++ N +TF+ ++ ACS  G + +GK V  K++  +  +  +     ++D+  + G L+
Sbjct: 499 SYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI--ISGLKDLFTDTALIDMYAKCGDLN 556

Query: 531 EAHEMIKSM 539
            A  + ++M
Sbjct: 557 AAETVFRAM 565



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 193/387 (49%), Gaps = 17/387 (4%)

Query: 175 MISMVSLFADVADVDLGKAIHA--CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLF 232
           M   + LF   + + L   +HA   V    + + L V   T LI+ Y+  G+   ++ +F
Sbjct: 1   MTQYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPV---TKLIESYAFMGSPDSSRLVF 57

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC-GFVGGL 291
                     + V+I   + C+ ++  + L+  ++ E    S+    S++  C G    L
Sbjct: 58  EAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHL 117

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
            +G  +H  I++ G +    +  +L+ MYG+   +  A  +FDGM  +D++ W+ ++S+ 
Sbjct: 118 SVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSC 177

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
            +   + KA  +F  M    V P+ VTM+ ++  C E G L + + +H  I ++  ++D 
Sbjct: 178 LENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDE 237

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
            L  +L+ MY+KCGD+  + R+F +   ++   W AM++ Y      E+AL  F +M +S
Sbjct: 238 TLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKS 297

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG----LVPKIEHYG-CMVDLLGRA 526
           G++PN +T   +L++C   GL+ EGKS     VHG      L P  E     +V+L    
Sbjct: 298 GIEPNLVTLYSVLSSCGLIGLIREGKS-----VHGFAVRRELDPNYESLSLALVELYAEC 352

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLA 553
           G L +   +++ +  R N++ W +L++
Sbjct: 353 GKLSDCETVLRVVSDR-NIVAWNSLIS 378


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  369 bits (946), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 198/603 (32%), Positives = 347/603 (57%), Gaps = 9/603 (1%)

Query: 36   LTRYNSLVTSYIKNN-KPSSALNIYAFMRKNGSEV---DNFTIPTILKACAQVLMTHLGK 91
            L  +NS++  +  N     S L +   M +NG      D  T+ T+L  CA+     LGK
Sbjct: 608  LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 667

Query: 92   EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
             +HG+A+K  LD +  ++NAL+ MYS+CG + +A+ +F    N++VVSW+TM+ G+   G
Sbjct: 668  GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 727

Query: 152  LPEEALEVMREMRF--MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
                  +V+R+M     D++  EV +++ V +    + +   K +H   ++  ++     
Sbjct: 728  DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLK--QEFVYNE 785

Query: 210  AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
             +A A +  Y+KCG+L+YA+++F+ +   +V SW  +I G+ + N+    +    +M   
Sbjct: 786  LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 845

Query: 270  NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
             + P   T+ SL+  C  +  L+LGK +H +I+RN  E  L +  +++ +Y  C E+ + 
Sbjct: 846  GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 905

Query: 330  RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
            + LFD M+ K ++ WN VI+ Y Q    D+A  +F  M +  ++   ++M+ +   C+  
Sbjct: 906  QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL 965

Query: 390  GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
             +L +G+  H Y  K  LE D  +  +L+DMYAK G +  + ++F+    +    WNAM+
Sbjct: 966  PSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMI 1025

Query: 450  AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
             GYG+HG  +EA+  F +M+R+G  P+ +TF+G+L AC+H+GL+ EG    D+M    GL
Sbjct: 1026 MGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGL 1085

Query: 510  VPKIEHYGCMVDLLGRAGLLDEAHEMI-KSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
             P ++HY C++D+LGRAG LD+A  ++ + M    ++ +W +LL++ ++H+N  MGE  A
Sbjct: 1086 KPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVA 1145

Query: 569  TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
             ++ E+EP+     VL+SN+YA   +W DV  VR+ M E+ ++K+ G S +E+N  V  F
Sbjct: 1146 AKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSF 1205

Query: 629  IRG 631
            + G
Sbjct: 1206 VVG 1208



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 145/460 (31%), Positives = 246/460 (53%), Gaps = 9/460 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTHLGKEIH 94
           L ++N++++SY +N      L  +  M      + D+FT P ++KACA +    +G  +H
Sbjct: 506 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 565

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           G  +K GL  D +V NAL+  Y   G +  A  LFD MP R++VSW++MIR +   G  E
Sbjct: 566 GLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSE 625

Query: 155 EAL----EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           E+     E+M E       P    +++++ + A   ++ LGK +H   V+   D++L   
Sbjct: 626 ESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL--V 683

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE-- 268
           +  AL+DMYSKCG +  A+ +F   N  +VVSW  M+ G+    + +    +  +M+   
Sbjct: 684 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 743

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
           E+V   E+TIL+ +  C     L   K LH Y L+  F ++  +ANA V  Y KC  +  
Sbjct: 744 EDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSY 803

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           A+ +F G++SK V  WNA+I  +AQ++    + +  + MK+S + P+  T+  LLS C++
Sbjct: 804 AQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSK 863

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
             +L +GK +H +I +  LE D+ +  +++ +Y  CG++     LF     + +  WN +
Sbjct: 864 LKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTV 923

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
           + GY  +G  + AL  F  M   G++  GI+ + +  ACS
Sbjct: 924 ITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 963



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 219/456 (48%), Gaps = 15/456 (3%)

Query: 57  NIYAFMRKNGSEVDNF-----TIPTILKACAQVLMTHLGKEIHGF-AIKNGLDGDAYVSN 110
            +  F+  + S  D F      +  +L+A  +     +G++IH   +    L  D  +  
Sbjct: 420 TVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCT 479

Query: 111 ALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIR 169
            +I MY+ CGS   +R++FD + ++++  W+ +I  Y R  L +E LE   EM    D+ 
Sbjct: 480 RIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLL 539

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           P       ++   A ++DV +G A+H  VV+    E   V +  AL+  Y   G +  A 
Sbjct: 540 PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVED--VFVGNALVSFYGTHGFVTDAL 597

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN----VFPSEITILSLIIEC 285
           QLF+ + + ++VSW  MI  +       E   L  EM+EEN      P   T+++++  C
Sbjct: 598 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 657

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
                + LGK +H + ++   +  L + NAL+DMY KC  I +A+ +F    +K+V+ WN
Sbjct: 658 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 717

Query: 346 AVISAYAQAHCIDKAFELFIHMKV--SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
            ++  ++        F++   M      V+ +EVT++  + +C     L   K LH Y  
Sbjct: 718 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 777

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
           KQ    + ++  A V  YAKCG ++ A R+F     + +  WNA++ G+        +L 
Sbjct: 778 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLD 837

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
             + M+ SG+ P+  T   LL+ACS    +  GK V
Sbjct: 838 AHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEV 873



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 148/324 (45%), Gaps = 22/324 (6%)

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILS------LIIECGFVGGLQLGKWLHAY 300
           IS +    ++++  R   E + ++   S+  +L       L+   G    +++G+ +H  
Sbjct: 405 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 464

Query: 301 I-----LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
           +     LRN       +   ++ MY  C     +R +FD ++SK++  WNAVIS+Y++  
Sbjct: 465 VSGSTRLRN----DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNE 520

Query: 356 CIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
             D+  E FI M   + + P+  T   ++  C     + +G  +H  + K GL  DV + 
Sbjct: 521 LYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVG 580

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD-MERSG- 472
            ALV  Y   G V  A +LF     R++  WN+M+  +  +G  EE+ +   + ME +G 
Sbjct: 581 NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 640

Query: 473 --VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
               P+  T + +L  C+    +  GK V    V  L L  ++     ++D+  + G + 
Sbjct: 641 GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK-LRLDKELVLNNALMDMYSKCGCIT 699

Query: 531 EAHEMIKSMPLRPNMIVWGALLAA 554
            A +MI  M    N++ W  ++  
Sbjct: 700 NA-QMIFKMNNNKNVVSWNTMVGG 722


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 203/609 (33%), Positives = 344/609 (56%), Gaps = 8/609 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  ++++V+ +  NN    AL  +  M +NG   + +      +AC+      +G  I G
Sbjct: 133 LISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFG 192

Query: 96  FAIKNG-LDGDAYVSNALIQMYSEC-GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           F IK G L  D  V   LI M+ +  G LVSA  +F++MP R+ V+W+ MI    + G  
Sbjct: 193 FVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYA 252

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            EA+++  +M F    P    +  ++S  A++  + LG+ +H+  +R+     L   +  
Sbjct: 253 GEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRH--GLTLDRCVGC 310

Query: 214 ALIDMYSKC---GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE-GVRLFAEMIEE 269
            LI+MY+KC   G++  A+++F+++  ++V SWT MI+GY++    +E  + LF  MI  
Sbjct: 311 CLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILT 370

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
           +V P+  T  S +  C  +  L++G+ +  + ++ GF     +AN+L+ MY +   I  A
Sbjct: 371 HVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDA 430

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           R  FD +  K+++ +N VI AYA+    ++A ELF  ++   +  +  T   LLS     
Sbjct: 431 RKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASI 490

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           G +  G+ +H  + K GL+++  +  AL+ MY++CG++  A+++F +   R++  W +++
Sbjct: 491 GTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSII 550

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
            G+  HG   +AL  F  M   GV+PN +T+I +L+ACSH GLV EG   F  M    G+
Sbjct: 551 TGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGV 610

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
           +P++EHY C+VD+LGR+G L EA + I SMP + + +VW   L A ++H N  +G+ AA 
Sbjct: 611 IPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVHGNLELGKHAAK 670

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            I+E EP +    +L+SN+YA  ++W++V+ +R+ MKE  + KE G S VEV   VHKF 
Sbjct: 671 MIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSWVEVENKVHKFY 730

Query: 630 RGGMVNWKS 638
            G   + K+
Sbjct: 731 VGDTSHPKA 739



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 261/554 (47%), Gaps = 22/554 (3%)

Query: 28  SYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           ++TN  NPLT     +   I N +   A++    M   GS  D  T    LK C +    
Sbjct: 27  TFTNP-NPLT---GRLIQEINNGRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSF 82

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM-PNRDVVSWSTMIRG 146
            +G  +H    ++ L  D+   N+LI +YS+CG    A  +F  M  +RD++SWS M+  
Sbjct: 83  DIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSC 142

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           +    +   AL    +M      P+E    +     +    V +G +I   V++    + 
Sbjct: 143 FANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQS 202

Query: 207 LGVAIATALIDMYSKC-GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
             V +   LIDM+ K  G+L  A ++F ++ + + V+WT+MI+  ++     E + LF +
Sbjct: 203 -DVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLD 261

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR- 324
           MI     P   T+  +I  C  +  L LG+ LH+  +R+G      +   L++MY KC  
Sbjct: 262 MIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSV 321

Query: 325 --EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID-KAFELFIHMKVSKVRPNEVTMVG 381
              + +AR +FD +   +V  W A+I+ Y Q    D +A +LF  M ++ V PN  T   
Sbjct: 322 DGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSS 381

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
            L  C    AL +G+ + T+  K G      +  +L+ MYA+ G ++ A + F     ++
Sbjct: 382 TLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKN 441

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           +  +N ++  Y  +   EEAL  F ++E  G+  +  TF  LL+  +  G + +G+ +  
Sbjct: 442 LISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHA 501

Query: 502 KMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
           +++  GL L   +     ++ +  R G ++ A ++ + M  R N+I W +++     H  
Sbjct: 502 RVIKSGLKLNQSV--CNALISMYSRCGNIESAFQVFEDMEDR-NVISWTSIITGFAKHG- 557

Query: 561 PSMGEIAATQILEI 574
                  ATQ LE+
Sbjct: 558 ------FATQALEL 565


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 202/606 (33%), Positives = 340/606 (56%), Gaps = 6/606 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIY-AFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           L  +NS++ ++ +N     + ++    + + G   D  T+ TIL  CA      +G  IH
Sbjct: 212 LVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIH 271

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           G A+K GL  +  V+NA++ MYS+CG L  A+  F +  N++VVSW+TMI  +   G   
Sbjct: 272 GLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVN 331

Query: 155 EALEVMREMRFM--DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
           EA  +++EM+    +++ +EV +++++    D   +   K +H    R+C      V ++
Sbjct: 332 EAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQH---VELS 388

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            A I  Y+KCG L  A+++F+ +   +V SW  +I G+ +  +  + + L  +M      
Sbjct: 389 NAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQ 448

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P   TI SL++ C  +  LQ GK +H Y+LRNG E    +  +L+  Y  C +  SAR L
Sbjct: 449 PDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVL 508

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           FD MK K+++ WNA+IS Y+Q     ++  LF       ++ +E+ +V +   C++  AL
Sbjct: 509 FDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSAL 568

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
            +GK  H Y+ K     D  +  +++DMYAK G +  + ++F     +++  WNA++  +
Sbjct: 569 RLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAH 628

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
           G+HG G+EA+  +  M++ G  P+  T+IG+L AC HAGLV EG   F +M +   + PK
Sbjct: 629 GIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPK 688

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           +EHY C++D+L RAG LD+A  ++  MP   +  +W +LL + +      +GE  A ++L
Sbjct: 689 LEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLL 748

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
           E+EP      VL+SN+YA   +W+ V  VR++MKEI ++K+ G S +EV G V+ F+ G 
Sbjct: 749 ELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIEVGGRVYSFVVGD 808

Query: 633 MVNWKS 638
            +  KS
Sbjct: 809 SLQPKS 814



 Score =  275 bits (704), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 168/530 (31%), Positives = 282/530 (53%), Gaps = 15/530 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYA-FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           L ++N+LV+ Y +N      + ++   +     + DNFT P+++KAC  +L   LG+ IH
Sbjct: 110 LIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIH 169

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           G  IK GL  D +V NAL+ MY +CG++  A  +FD MP  ++VSW++MI  +   G   
Sbjct: 170 GMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSR 229

Query: 155 EALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           ++ +++ EM   + + P  V +++++ + A   +VD+G  IH   V+    E+  V +  
Sbjct: 230 DSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEE--VMVNN 287

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM-IE-ENV 271
           A++ MYSKCG L  A+  F + N  +VVSW  MIS +    ++NE   L  EM I+ E +
Sbjct: 288 AMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEM 347

Query: 272 FPSEITILSLIIECGFVGGLQLG--KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
             +E+TIL+++  C  +  LQL   K LH Y  R+ F+  + ++NA +  Y KC  + SA
Sbjct: 348 KANEVTILNVLPAC--LDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALNSA 404

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             +F G+  K V  WNA+I  +AQ     KA  L   M  S  +P+  T+  LL  C   
Sbjct: 405 EKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHL 464

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            +L+ GK +H Y+ + GLE D  + T+L+  Y  CG  + A  LF     +++  WNAM+
Sbjct: 465 KSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMI 524

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           +GY  +G   E+L  F      G++ + I  + +  ACS    +  GK     ++  L  
Sbjct: 525 SGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQ- 583

Query: 510 VPKIEHYGC-MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             +    GC ++D+  ++G + E+ ++   +  + N+  W A++ A  +H
Sbjct: 584 -TEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDK-NVASWNAIIVAHGIH 631



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 137/477 (28%), Positives = 238/477 (49%), Gaps = 15/477 (3%)

Query: 28  SYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           S+   I  L   ++L T+ I     S      AF+     E     I  +L+AC      
Sbjct: 7   SFLQEIAALCETDNLTTALILIQSHSQNA---AFISLQAKE----AIGLLLQACGNQKDI 59

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNA-LIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
             G+ +H F   +    + YV N  LI+MY+ CGS + +R +FD M  ++++ W+ ++ G
Sbjct: 60  ETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMETKNLIQWNALVSG 119

Query: 147 YHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           Y R GL  + ++V  ++    D +P      S++     + DV LG+ IH  V++     
Sbjct: 120 YTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIK--MGL 177

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
            L V +  AL+ MY KCG +  A ++F+ + + ++VSW  MI  +       +   L  E
Sbjct: 178 VLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGFSRDSFDLLME 237

Query: 266 MI-EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           M+ EE + P  +T+++++  C   G + +G  +H   ++ G    + + NA+V MY KC 
Sbjct: 238 MLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCG 297

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS--KVRPNEVTMVGL 382
            +  A+  F    +K+V+ WN +ISA++    +++AF L   M++   +++ NEVT++ +
Sbjct: 298 YLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNV 357

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           L  C +   L   K LH Y  +   +  V L  A +  YAKCG +N A ++F     + +
Sbjct: 358 LPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALNSAEKVFHGIGDKTV 416

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
             WNA++ G+  +G   +AL     M  SG +P+  T   LL AC+H   +  GK +
Sbjct: 417 SSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEI 473


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 209/596 (35%), Positives = 329/596 (55%), Gaps = 8/596 (1%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQ-VLMTHLGKEIHGFAIKN 100
           L++ Y +N  P  A  +   M   G   + F   + ++AC + +L    G+++HG+AI+ 
Sbjct: 72  LISGYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRT 131

Query: 101 GL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
           GL D    V N LI MY++CG +  AR +F  M ++D VSW++MI G  +    E+A++ 
Sbjct: 132 GLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKS 191

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
              MR   + PS  A+IS +S  A +  + LG+  H   ++   D  + V+++  L+ +Y
Sbjct: 192 YNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLD--MDVSVSNTLLALY 249

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN-EINEGVRLFAEMIEENVFPSEITI 278
           ++   LA  +++F+ + +   VSW  +I         ++E + +F EM+     P+ +T 
Sbjct: 250 AETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTF 309

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM-K 337
           ++L+     +   +L   +HA IL+   +   A+ NAL+  YGK  E+ +   +F  M +
Sbjct: 310 INLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSE 369

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +D + WN++IS Y     + KA +L   M     R +  T   +LS C     LE G  
Sbjct: 370 RRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGME 429

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H    +  LE DV++ +ALVDMY+KCG ++ A R F+    R++  WN+M++GY  HG 
Sbjct: 430 VHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGH 489

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G+ AL  F  M+ SG  P+ ITF+G+L+ACSH GLV EG   F  M    GLVP++EHY 
Sbjct: 490 GDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYS 549

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL--HKNPSMGEIAATQILEIE 575
           CMVDLLGRAG LD+    I  MP++PN+++W  +L A      +   +G  AA  +  ++
Sbjct: 550 CMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMD 609

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           PQN    VL+SN+YA   +W D+A  RR M+E  VKKE G S V +   VH F+ G
Sbjct: 610 PQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAG 665



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 239/473 (50%), Gaps = 14/473 (2%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
            H   +K+G D D ++ N LI +Y   G  VSAR LFDEMP+R+ V+W+ +I GY + G+
Sbjct: 22  FHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNGM 81

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFAD-VADVDLGKAIHACVVRN-CKDEKLGVA 210
           PE+A  V++EM F    P+  A  S +    + +     G+ +H   +R    D K  VA
Sbjct: 82  PEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAK--VA 139

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           +   LI+MY+KCG++ +A+ +F  +     VSW  MI+G  +     + V+ +  M +  
Sbjct: 140 VGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYNSMRKTG 199

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + PS   ++S +  C  +G + LG+  H   ++ G +  ++++N L+ +Y +   +   +
Sbjct: 200 LMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAECQ 259

Query: 331 TLFDGMKSKDVMIWNAVISAYAQA-HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
            +F  M  +D + WN VI A A +   + +A E+F+ M  +   PN VT + LL+  +  
Sbjct: 260 KVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSL 319

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAM 448
              ++   +H  I K  ++ D  ++ AL+  Y K G++     +FS  +  RD   WN+M
Sbjct: 320 STSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSM 379

Query: 449 MAGYGMHG---CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           ++GY +H    C    L++   M + G + +  TF  +L+AC+    +  G  V    + 
Sbjct: 380 ISGY-IHNELLCKAMDLVWL--MMQRGQRLDCFTFATVLSACATVATLECGMEVHACAIR 436

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
              L   +     +VD+  + G +D A      MP+R N+  W ++++    H
Sbjct: 437 AC-LESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR-NLYSWNSMISGYARH 487



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 215/418 (51%), Gaps = 8/418 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++T   +N     A+  Y  MRK G    NF + + L +CA +    LG++ HG  I
Sbjct: 172 WNSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGI 231

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP-EEAL 157
           K GLD D  VSN L+ +Y+E   L   + +F  M  RD VSW+T+I      G    EA+
Sbjct: 232 KLGLDMDVSVSNTLLALYAETSRLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAI 291

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALI 216
           EV  EM      P+ V  I++++  + ++   L   IHA +++ N KD+    AI  AL+
Sbjct: 292 EVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDN---AIENALL 348

Query: 217 DMYSKCGNLAYAKQLFNRLNQ-NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
             Y K G +   +++F+R+++    VSW  MISGYI    + + + L   M++       
Sbjct: 349 ACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDC 408

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T  +++  C  V  L+ G  +HA  +R   E  + + +ALVDMY KC  I  A   F+ 
Sbjct: 409 FTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNL 468

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M  +++  WN++IS YA+    D A  LF  MK+S   P+ +T VG+LS C+  G ++ G
Sbjct: 469 MPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEG 528

Query: 396 -KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAG 451
            ++  +  E  GL   V   + +VD+  + G+++      ++  I  +I +W  ++  
Sbjct: 529 FEYFKSMTEVYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGA 586



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 17/238 (7%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++ YI N     A+++   M + G  +D FT  T+L ACA V     G E+H  AI
Sbjct: 376 WNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEVHACAI 435

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +  L+ D  + +AL+ MYS+CG +  A   F+ MP R++ SW++MI GY R G  + AL 
Sbjct: 436 RACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHGDNALR 495

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLG-------KAIHACVVRNCKDEKLGVAI 211
           +   M+     P  +  + ++S  + +  VD G         ++  V R        V  
Sbjct: 496 LFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPR--------VEH 547

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCN-EINEGVRLFAEMI 267
            + ++D+  + G L   +   N++  + +++ W  ++    R N    E  R  AEM+
Sbjct: 548 YSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEML 605


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 191/571 (33%), Positives = 309/571 (54%), Gaps = 12/571 (2%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF 129
           D  T+  +++  A+    + GK++H   I+ G   + ++SN  + +YS+CG L     LF
Sbjct: 74  DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           D+M  R++VSW+++I G+      +EAL    +MR      ++ A+ S++     +  + 
Sbjct: 134 DKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQ 193

Query: 190 LGKAIHACVVR---NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
            G  +H  VV+    C+     + + + L DMYSKCG L+ A + F  +     V WT M
Sbjct: 194 FGTQVHCLVVKCGFGCE-----LFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSM 248

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           I G+++  +  + +  + +M+ ++VF  +  + S +  C  +     GK LHA IL+ GF
Sbjct: 249 IDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGF 308

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFD-GMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
           E+   + NAL DMY K  ++ SA  +F        ++   A+I  Y +   I+KA   F+
Sbjct: 309 EYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFV 368

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            ++   + PNE T   L+  C     LE G  LH  + K   + D  + + LVDMY KCG
Sbjct: 369 DLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCG 428

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
             + + +LF E    D   WN ++  +  HG G  A+  F  M   G+KPN +TF+ LL 
Sbjct: 429 LFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLK 488

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
            CSHAG+V +G + F  M    G+VPK EHY C++DLLGRAG L EA + I +MP  PN+
Sbjct: 489 GCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEPNV 548

Query: 546 IVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVM 605
             W + L A K+H +    + AA +++++EP+N G +VL+SNIYA   +W DV  +R+++
Sbjct: 549 FGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMI 608

Query: 606 KEIRVKKEPGFSSVEVNGLVHKFIRGGMVNW 636
           K+  + K PG+S V++    H F   G+ +W
Sbjct: 609 KDGNMNKLPGYSWVDIRNKTHVF---GVEDW 636



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 239/494 (48%), Gaps = 27/494 (5%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFM 62
           + N FLNL        + IK   K S  N+++    + S++T +  N++   AL+ +  M
Sbjct: 112 LSNHFLNLYSKCGELDYTIKLFDKMSQRNMVS----WTSIITGFAHNSRFQEALSSFCQM 167

Query: 63  RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSL 122
           R  G     F + ++L+AC  +     G ++H   +K G   + +V + L  MYS+CG L
Sbjct: 168 RIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGEL 227

Query: 123 VSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLF 182
             A   F+EMP +D V W++MI G+ + G  ++AL    +M   D+   +  + S +S  
Sbjct: 228 SDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSAC 287

Query: 183 ADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFN-RLNQ 237
           + +     GK++HA ++      KLG      I  AL DMYSK G++  A  +F    + 
Sbjct: 288 SALKASSFGKSLHATIL------KLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDC 341

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
            S+VS T +I GY+  ++I + +  F ++    + P+E T  SLI  C     L+ G  L
Sbjct: 342 ISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQL 401

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           H  +++  F+    +++ LVDMYGKC     +  LFD +++ D + WN ++  ++Q    
Sbjct: 402 HGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLG 461

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK-QGLEVDVILKTA 416
             A E F  M    ++PN VT V LL  C+ AG +E G    + +EK  G+       + 
Sbjct: 462 RNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSC 521

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           ++D+  + G +  A    +   +  ++  W + +    +HG          DMER+    
Sbjct: 522 VIDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGACKIHG----------DMERAKFAA 571

Query: 476 NGITFIGLLNACSH 489
           + +  +   N+ +H
Sbjct: 572 DKLMKLEPENSGAH 585


>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 702

 Score =  369 bits (946), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 206/587 (35%), Positives = 330/587 (56%), Gaps = 30/587 (5%)

Query: 58  IYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG-FAIKNGLDGDAYVSNALIQMY 116
           I+  +  N +    F + ++LK C     T   ++IH  F I +      +  N L+   
Sbjct: 8   IFKTINTNTNHSPIFLLLSLLKQCPS---TKTLQQIHTQFTIHS-----IHKPNHLLSQS 59

Query: 117 SECGSLVSARYLFDEM-PNRDVVSWSTMIRG----YHRGGLPEEALEVMREMRFMDIRPS 171
                   +  +F  + P+ +  +++ M+R     +H   L    L +  +M+ ++I P+
Sbjct: 60  ISLKDFTYSTLIFSHITPHPNDYAFNIMLRATTTTWHDYPL---TLHLYHQMKTLNISPN 116

Query: 172 EVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAY 227
                 +    A++ ++ + +  H      C+  KLG+        +++ MY +CG    
Sbjct: 117 NFTFPFVFLACANLEEIRMARLAH------CEVFKLGLDNDHHTVNSMVTMYFRCGENGV 170

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF-PSEITILSLIIECG 286
           A+++F+ + +  +VSW  ++SGY +     E V +F  + EE+ F P E++++S++  CG
Sbjct: 171 ARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACG 230

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
            +G L+LG+W+  +++  G + +  + +AL+ MY KC E+ S+R +FDGM S+D + WNA
Sbjct: 231 ELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNA 290

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
            ISAYAQ    D+A  LF  MK + V PN+VT+  +LS C   GAL++GK +  Y   +G
Sbjct: 291 AISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRG 350

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
           L+ D+ + TAL+DMYAKCG +  A R+F++   ++   WNAM++    HG  +EAL  F 
Sbjct: 351 LQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFE 410

Query: 467 DMERSG--VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLG 524
            M   G   +PN ITF+ LL+AC HAGLV EG  +FD M    GLVPKIEHY CMVDLL 
Sbjct: 411 RMSDEGGSARPNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLS 470

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVL 584
           RAG L EA ++I+ MP +P+ +  GAL +A +  KN  +GE     +LE++P N G  ++
Sbjct: 471 RAGHLYEAWDVIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYII 530

Query: 585 MSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            S IY   N W+D A +R +M+E  V K PG S +EV   + +F+ G
Sbjct: 531 SSKIYENLNMWDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSG 577



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/460 (30%), Positives = 233/460 (50%), Gaps = 37/460 (8%)

Query: 7   FLNLEQTRQCHAH--IIKTHFKFSYTNIINP---LTR--------YNSLVTSYIKNNKPS 53
           FL L   +QC +   + + H +F+  +I  P   L++        Y++L+ S+I  +   
Sbjct: 22  FLLLSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSISLKDFTYSTLIFSHITPHPND 81

Query: 54  SALNI------------------YAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
            A NI                  Y  M+      +NFT P +  ACA +    + +  H 
Sbjct: 82  YAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHC 141

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              K GLD D +  N+++ MY  CG    AR +FDE+  +D+VSW++++ GY + G   E
Sbjct: 142 EVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFARE 201

Query: 156 ALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           A+EV   +R      P E++++S++    ++ D++LG+ +   VV   +  K+   I +A
Sbjct: 202 AVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVE--RGMKVNSYIGSA 259

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LI MYSKCG L  ++++F+ +     ++W   IS Y +    +E + LF  M E  V P+
Sbjct: 260 LISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPN 319

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           ++T+ +++  C  +G L LGK +  Y    G +  + +A AL+DMY KC  + SA+ +F+
Sbjct: 320 KVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFN 379

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM--KVSKVRPNEVTMVGLLSLCTEAGAL 392
            M  K+   WNA+ISA A      +A  LF  M  +    RPN++T V LLS C  AG +
Sbjct: 380 DMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGLV 439

Query: 393 EMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAY 431
           + G  L   +    GL   +   + +VD+ ++ G +  A+
Sbjct: 440 DEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAW 479



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 210/414 (50%), Gaps = 57/414 (13%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRK-NGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           L  +NSL++ Y K      A+ ++  +R+ +G E D  ++ ++L AC ++    LG+ + 
Sbjct: 183 LVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVE 242

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           GF ++ G+  ++Y+ +ALI MYS+CG LVS+R +FD MP+RD ++W+  I  Y + G+ +
Sbjct: 243 GFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMAD 302

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           EA+ +   M+   + P++V + +++S  A +  +DLGK +        +  +  + +ATA
Sbjct: 303 EAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATH--RGLQHDIFVATA 360

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE--NVF 272
           LIDMY+KCG+L  A+++FN + + +  SW  MIS      +  E + LF  M +E  +  
Sbjct: 361 LIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSAR 420

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P++IT +SL+  C           +HA ++  G+         L DM           TL
Sbjct: 421 PNDITFVSLLSAC-----------VHAGLVDEGYR--------LFDMMS---------TL 452

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F G+  K +  ++ ++   ++A  + +A+++   M     +P+ VT+  L S C     +
Sbjct: 453 F-GLVPK-IEHYSCMVDLLSRAGHLYEAWDVIEKM---PEKPDNVTLGALHSACQRKKNV 507

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
           ++G+                    ++ M  +    N    + S  IY ++ MW+
Sbjct: 508 DIGE-------------------RVIQMLLELDPSNSGNYIISSKIYENLNMWD 542


>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
 gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  368 bits (945), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 196/549 (35%), Positives = 312/549 (56%), Gaps = 17/549 (3%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H   IK G   + +V + L+ +Y++CG +V+AR +FD +P R+VV W+T++ GY +   
Sbjct: 2   VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV--RNCKDEKLGVA 210
           PE A+EV  +M      PS   +   ++  + +  + LGK  HA ++  R   D  +G  
Sbjct: 62  PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIG-- 119

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
              AL  +YSK G+L  + + F    +  V+SWT +IS          G+RLF EM+ EN
Sbjct: 120 --NALCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFEN 177

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           V P++ T+ S++  C  +    LG  +H+   + G E +L + N+LV +Y KC  I  A+
Sbjct: 178 VEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAK 237

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDK-----------AFELFIHMKVSKVRPNEVTM 379
            LF+ M+ K+++ WNA+I+ +AQA  + K           A  +++ +  S  +P+  T+
Sbjct: 238 NLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTL 297

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
             +L++C+   ALE G+ +H    K G   DV++ TALVDMY KCG +  A + F +   
Sbjct: 298 SSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMST 357

Query: 440 RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           R +  W +M+  +  HG  + AL  F DM  +G +PN ITF+G+L ACSHAG+V E    
Sbjct: 358 RTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEY 417

Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK 559
           F+ M     + P ++HYGC+VD+  R G LDEA ++IK M + PN  +W  L+A  + H 
Sbjct: 418 FEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHG 477

Query: 560 NPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           N  +G  AA Q+L+++P++    V++ N+Y  A RW DV+ VRR+MKE +V K   +S +
Sbjct: 478 NEELGFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDWSRI 537

Query: 620 EVNGLVHKF 628
            + G VH F
Sbjct: 538 SIKGEVHSF 546



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 262/508 (51%), Gaps = 44/508 (8%)

Query: 17  HAHIIKT--HFKF-----------------SYTNIINPLTRYN-----SLVTSYIKNNKP 52
           HAH+IKT  H +F                 +   + + L R N     +L+T Y++N++P
Sbjct: 3   HAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQP 62

Query: 53  SSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNAL 112
             A+ ++  M ++GS   NFT+   L AC+ +    LGK+ H F IK  +  D+ + NAL
Sbjct: 63  EVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNAL 122

Query: 113 IQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSE 172
             +YS+ GSL S+   F E   +DV+SW+T+I      G     L +  EM F ++ P++
Sbjct: 123 CSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPND 182

Query: 173 VAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLF 232
             + S++SL + +   DLG  +H+   +   +  L   I  +L+ +Y KCG +  AK LF
Sbjct: 183 FTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNL--RITNSLVYLYLKCGCIDEAKNLF 240

Query: 233 NRLNQNSVVSWTVMISGYIRCNEI-----------NEGVRLFAEMIEENVFPSEITILSL 281
           NR+   ++++W  MI+G+ +  ++            E + ++ ++      P   T+ S+
Sbjct: 241 NRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSI 300

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +  C  +  L+ G+ +HA  +++GF   + +  ALVDMY KC  I  AR  F  M ++ +
Sbjct: 301 LTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTL 360

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           + W ++I+++A+      A +LF  M+++  RPN++T VG+L+ C+ AG ++        
Sbjct: 361 ISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEI 420

Query: 402 IEKQGLEVDVILKT--ALVDMYAKCGDVNGAYRLFSEA-IYRDICMWNAMMAGYGMHGCG 458
           ++K+  ++  ++     LVDM+ + G ++ A+ +     +  +  +W  ++AG   H  G
Sbjct: 421 MQKE-YKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNH--G 477

Query: 459 EEALIFFVDMERSGVKPNGI-TFIGLLN 485
            E L F+   +   +KP    T++ LLN
Sbjct: 478 NEELGFYAAEQLLKLKPRSTETYVVLLN 505


>gi|297804224|ref|XP_002869996.1| putative protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315832|gb|EFH46255.1| putative protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1251

 Score =  368 bits (945), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 207/603 (34%), Positives = 326/603 (54%), Gaps = 8/603 (1%)

Query: 39   YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
            +N  V   +  N P  +L ++  M++ G E +NFT P + KACA++      + +H   I
Sbjct: 616  WNFQVREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLAYIGYCEMVHTHLI 675

Query: 99   KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            K+    D +V  A + M+ +C SL  A  +F+ MP RD  +W+ M+ G+ + G  ++   
Sbjct: 676  KSPFWSDVFVGTATVDMFVKCDSLDYAAKVFERMPVRDATTWNAMLSGFCQSGHTDKVFS 735

Query: 159  VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
            + REMR  +I P  V +++++   +    + L K +HA  +R   D  L   ++   I  
Sbjct: 736  LFREMRLDEIPPDSVTVMTLIQSASFEKSLKLLKVMHAFGIRLGVD--LQATVSNTWISA 793

Query: 219  YSKCGNLAYAKQLFNRLNQ--NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
            Y KCG+L  AK +F  +++   +VVSW  +   +    E  +    +  M+ +   P   
Sbjct: 794  YGKCGDLDSAKLVFEAIDRGDRTVVSWNSVFKAFAVFGEAFDAFGHYRLMLRDEFKPDLS 853

Query: 277  TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
            T ++L   C     L  G+ +H++ +  G +  +   N  + MY K  +  SAR LFD M
Sbjct: 854  TFINLAASCQNPQTLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSGDSCSARLLFDIM 913

Query: 337  KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             S+  + W  +IS YA+   +D+A  LF  M  + V P+ VT++ L+S C + G+LE+GK
Sbjct: 914  PSRTCVSWTVMISGYAEKGDMDEALALFHAMAKTGVNPDLVTLLSLISGCGKFGSLEIGK 973

Query: 397  WLHTYIEKQGLEVD-VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
            W+    +  G + D V++  AL+DMY+KCG ++ A  +F     + +  W  M+AGY ++
Sbjct: 974  WIDGRADMYGCKKDNVMVCNALIDMYSKCGSIDEARDIFDNTSEKTMVTWTTMIAGYALN 1033

Query: 456  GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
            G   EA+  F  M     KPN ITF+ +L AC+H+G + +G   F  M     + P ++H
Sbjct: 1034 GIFLEAMELFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDH 1093

Query: 516  YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
            Y CMVDLLGR G LDEA E+I +M  +P+  +WGALL+A K+H+N  + E AA  +  +E
Sbjct: 1094 YSCMVDLLGRKGKLDEALELIHNMSAKPDAGIWGALLSACKIHRNVKIAEQAADSLFNLE 1153

Query: 576  PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI---RGG 632
            PQ     V MSNIYA A  W+  A +R +MK   +KK PG S ++VNG  H F    RG 
Sbjct: 1154 PQMAAPYVEMSNIYAAAGMWDGFARIRSMMKLWNIKKYPGESVIQVNGKNHTFTVGERGH 1213

Query: 633  MVN 635
            M N
Sbjct: 1214 MEN 1216


>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
 gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 727

 Score =  368 bits (944), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 209/608 (34%), Positives = 333/608 (54%), Gaps = 13/608 (2%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSA---LNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH 88
           I   +  +NSL+T Y +N   SS+   + ++  MR      + +T+  I KA + +  + 
Sbjct: 76  ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSST 135

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           +G++ H   +K    GD YV  +L+ MY + G +     +F  MP R+  +WSTM+ GY 
Sbjct: 136 VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYA 195

Query: 149 RGGLPEEALEV----MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
             G  EEA++V    +RE    +   S+    +++S  A    V LG+ IH   ++N   
Sbjct: 196 TRGRVEEAIKVFNLFLREKE--EGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKN--- 250

Query: 205 EKLG-VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
             LG VA++ AL+ MYSKC +L  A ++F+     + ++W+ M++GY +  E  E V+LF
Sbjct: 251 GLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLF 310

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
           + M    + PSE TI+ ++  C  +  L+ GK LH+++L+ GFE  L    ALVDMY K 
Sbjct: 311 SRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKA 370

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
             +  AR  FD ++ +DV +W ++IS Y Q    ++A  L+  MK + + PN+ TM  +L
Sbjct: 371 GCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVL 430

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
             C+    LE+GK +H +  K G  ++V + +AL  MY+KCG +     +F     +D+ 
Sbjct: 431 KACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVV 490

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            WNAM++G   +G G+EAL  F +M   G++P+ +TF+ +++ACSH G V  G   F+ M
Sbjct: 491 SWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMM 550

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
              +GL PK++HY CMVDLL RAG L EA E I+S  +   + +W  LL+A K H    +
Sbjct: 551 SDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCEL 610

Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
           G  A  +++ +  +     V +S IY    R  DV  V + M+   V KE G S +E+  
Sbjct: 611 GVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKN 670

Query: 624 LVHKFIRG 631
             H F+ G
Sbjct: 671 QYHVFVVG 678



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 143/475 (30%), Positives = 250/475 (52%), Gaps = 19/475 (4%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G+ +HG  I+ G       +N L+  Y++CG L  A  +F+ +  +DVVSW+++I GY +
Sbjct: 33  GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92

Query: 150 GGLPEEALEVM---REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
            G    +  VM   REMR  DI P+   +  +    + +    +G+  HA VV   K   
Sbjct: 93  NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVV---KMSS 149

Query: 207 LG-VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
            G + + T+L+ MY K G +    ++F  + + +  +W+ M+SGY     + E +++F  
Sbjct: 150 FGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNL 209

Query: 266 MIEENVFPSE-----ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
            + E    S+       +LS +    +VG   LG+ +H   ++NG    +A++NALV MY
Sbjct: 210 FLREKEEGSDSDYVFTAVLSSLAATIYVG---LGRQIHCITIKNGLLGFVALSNALVTMY 266

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
            KC  +  A  +FD    ++ + W+A+++ Y+Q     +A +LF  M  + ++P+E T+V
Sbjct: 267 SKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIV 326

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
           G+L+ C++   LE GK LH+++ K G E  +   TALVDMYAK G +  A + F     R
Sbjct: 327 GVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQER 386

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           D+ +W ++++GY  +   EEALI +  M+ +G+ PN  T   +L ACS    +  GK V 
Sbjct: 387 DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVH 446

Query: 501 DKMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
              + HG GL   I     +  +  + G L++ + + +  P   +++ W A+++ 
Sbjct: 447 GHTIKHGFGLEVPIG--SALSTMYSKCGSLEDGNLVFRRTP-NKDVVSWNAMISG 498



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 134/287 (46%), Gaps = 7/287 (2%)

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P   T+L  +        L  G+ +H  I+R G    +  AN LV+ Y KC ++  A ++
Sbjct: 12  PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAF---ELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           F+ +  KDV+ WN++I+ Y+Q   I  ++   +LF  M+   + PN  T+ G+    +  
Sbjct: 72  FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            +  +G+  H  + K     D+ + T+LV MY K G V    ++F+    R+   W+ M+
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191

Query: 450 AGYGMHGCGEEALIFF--VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           +GY   G  EEA+  F     E+     +   F  +L++ +    V  G+ +    +   
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKN- 250

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           GL+  +     +V +  +   L+EA +M  S   R N I W A++  
Sbjct: 251 GLLGFVALSNALVTMYSKCESLNEACKMFDSSGDR-NSITWSAMVTG 296



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 17/194 (8%)

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
           +++ P+  T++  L+  ++   L  G+ +H  I + G    +     LV+ YAKCG +  
Sbjct: 8   TELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAK 67

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHG---CGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           A+ +F+  I +D+  WN+++ GY  +G        +  F +M    + PN  T  G+  A
Sbjct: 68  AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127

Query: 487 CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG------CMVDLLGRAGLLDEAHEMIKSMP 540
            S     T G+           LV K+  +G       +V +  +AGL+++  ++   MP
Sbjct: 128 ESSLQSSTVGRQAH-------ALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180

Query: 541 LRPNMIVWGALLAA 554
            R N   W  +++ 
Sbjct: 181 ER-NTYTWSTMVSG 193


>gi|242062998|ref|XP_002452788.1| hypothetical protein SORBIDRAFT_04g032540 [Sorghum bicolor]
 gi|241932619|gb|EES05764.1| hypothetical protein SORBIDRAFT_04g032540 [Sorghum bicolor]
          Length = 662

 Score =  368 bits (944), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 213/594 (35%), Positives = 317/594 (53%), Gaps = 11/594 (1%)

Query: 35  PLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           P++  N+L+ SY        AL +Y+ MR      D+ T     KACA +     G+ +H
Sbjct: 76  PVSVSNTLLRSYTGLGFNRQALALYSQMRA----FDHLTFTFAAKACADLRRRRHGRAVH 131

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           G A+  G  GD YV NAL+ MY  C  +VSA  +F  + +R  VSW+T+I G  + G  E
Sbjct: 132 GRALTAGFGGDGYVQNALVSMYMRCRDVVSAEAVFGALRSRTTVSWNTVITGCVKDGRAE 191

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIAT 213
            ALEV   M    +      ++S++   A   D+ +G+A+H   VVR   +     A+  
Sbjct: 192 RALEVFETMVGRGVCIDRATVVSVLPACAQARDLHMGRAVHRLAVVRGLGNY---AAVKN 248

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQN-SVVSWTVMISGYIRCNEINEGVRLFAEM-IEENV 271
           ALIDMY KC +L  AK++F+  + +  VVSWT MI  Y+  +  ++   L +EM +    
Sbjct: 249 ALIDMYGKCRSLEDAKRVFDEDSYDKDVVSWTAMIGAYVLNDHASKAFALGSEMLVTSEA 308

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P+ +T++ L+  C  +   +  K  HA  +R G      +  ALVD Y KC  +     
Sbjct: 309 QPNAVTMVHLLSACTSLLSGKHAKCTHALCIRLGLGSDTVVETALVDCYAKCGYMGMIDM 368

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           + +   S+    WNA IS Y       KA  LF  M    VRP+  TM  ++    E+  
Sbjct: 369 VVE-KGSRRTETWNAAISGYTHREQGKKALALFKQMLAESVRPDSATMASVIPAYAESAD 427

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L   K +H  +  +G      + T L+++YAK GD+  A+ LF     +D+  W  ++AG
Sbjct: 428 LVQAKNIHCCLLIRGCLGSTDIATGLINVYAKAGDLGVAWELFQCLPEKDVVAWTTVIAG 487

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           YGMHG  + A++ +  M   GV PN +T   L+ +CSHAG+V EG  +F+ M    GL+P
Sbjct: 488 YGMHGHAQTAILLYSRMIEMGVTPNTVTMASLMYSCSHAGMVDEGLRLFNDMRGVHGLMP 547

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
             EHY C+VD+LGRAG ++EA+ +I+ MP  P+  VW ALL A  LH+N   GE+AA  +
Sbjct: 548 NAEHYLCLVDMLGRAGRIEEAYRLIQDMPFEPSTSVWSALLGACVLHENVEFGEVAAKHL 607

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLV 625
            E+EP N G  VL+  +YA A+RW+DV  + RVM+   + K+PG S V+    V
Sbjct: 608 FELEPDNVGNYVLLGKVYAAADRWSDVQDLWRVMEGRGLHKDPGSSVVDAKSEV 661



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/505 (28%), Positives = 241/505 (47%), Gaps = 24/505 (4%)

Query: 79  KACAQVLMTHLGKEIHGFAIKNG--LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           K+ A  L+     ++H   +K+G  L  D+   + L+  Y  CG    A  L  +MP   
Sbjct: 18  KSSATPLVPTTAAQLHALLLKSGHLLHCDSI--HLLLGSYCACGRPFDAHNLLVQMPQPP 75

Query: 137 VVSWS-TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
            VS S T++R Y   G   +AL +  +MR  D          +   FA  A  DL +  H
Sbjct: 76  PVSVSNTLLRSYTGLGFNRQALALYSQMRAFD---------HLTFTFAAKACADLRRRRH 126

Query: 196 ACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
              V   +    G      +  AL+ MY +C ++  A+ +F  L   + VSW  +I+G +
Sbjct: 127 GRAVHG-RALTAGFGGDGYVQNALVSMYMRCRDVVSAEAVFGALRSRTTVSWNTVITGCV 185

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +       + +F  M+   V     T++S++  C     L +G+ +H   +  G     A
Sbjct: 186 KDGRAERALEVFETMVGRGVCIDRATVVSVLPACAQARDLHMGRAVHRLAVVRGLGNYAA 245

Query: 312 MANALVDMYGKCREIRSARTLFD-GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV- 369
           + NAL+DMYGKCR +  A+ +FD     KDV+ W A+I AY       KAF L   M V 
Sbjct: 246 VKNALIDMYGKCRSLEDAKRVFDEDSYDKDVVSWTAMIGAYVLNDHASKAFALGSEMLVT 305

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
           S+ +PN VTMV LLS CT   + +  K  H    + GL  D +++TALVD YAKCG + G
Sbjct: 306 SEAQPNAVTMVHLLSACTSLLSGKHAKCTHALCIRLGLGSDTVVETALVDCYAKCGYM-G 364

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
              +  E   R    WNA ++GY     G++AL  F  M    V+P+  T   ++ A + 
Sbjct: 365 MIDMVVEKGSRRTETWNAAISGYTHREQGKKALALFKQMLAESVRPDSATMASVIPAYAE 424

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           +  + + K++   ++   G +   +    ++++  +AG L  A E+ + +P + +++ W 
Sbjct: 425 SADLVQAKNIHCCLLI-RGCLGSTDIATGLINVYAKAGDLGVAWELFQCLPEK-DVVAWT 482

Query: 550 ALLAASKLHKNPSMGEIAATQILEI 574
            ++A   +H +     +  ++++E+
Sbjct: 483 TVIAGYGMHGHAQTAILLYSRMIEM 507


>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  368 bits (944), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 201/611 (32%), Positives = 324/611 (53%), Gaps = 43/611 (7%)

Query: 26  KFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVL 85
           K  Y   I     ++SL++ Y +      AL ++  M+  G   + FT  ++L+ C+  +
Sbjct: 93  KLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYV 152

Query: 86  MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN-RDVVSWSTMI 144
           +   GK+IH  AIK   D +A+V   L+ MY++C  ++ A YLF+  P+ R+ V W+ M+
Sbjct: 153 LLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMV 212

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
            GY + G   +A+E  R+MR   I  ++    S+++    ++    G  +H C+VR+   
Sbjct: 213 TGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRS--G 270

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
               V + +AL+DMYSKCG+L+ A+++   +  +  VSW  MI G +R     E + LF 
Sbjct: 271 FGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFR 330

Query: 265 EM------IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
            M      I+E  +PS +   S +++      ++    +H+ I++ GFE    + NALVD
Sbjct: 331 IMHLRHMKIDEFTYPSVLNCFSFVMD------MRNAMSVHSLIVKTGFEAYKLVNNALVD 384

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
           MY K      A  +F+ M  KDV+ W ++++        ++A  LF  M++  + P+++ 
Sbjct: 385 MYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIV 444

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
           +  +LS C E   LE GK +H    K GL   + +  +LV MYAKCG +  A ++F    
Sbjct: 445 IAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSME 504

Query: 439 YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKS 498
            +D+  W A++ GY  +G G +                            HAGLV  G+S
Sbjct: 505 IQDVITWTALIVGYAQNGRGRD----------------------------HAGLVEHGRS 536

Query: 499 VFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            F  M    G+ P  EHY CM+DLLGR+G L EA E++  M ++P+  VW ALLAA ++H
Sbjct: 537 YFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAACRVH 596

Query: 559 KNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSS 618
            N  +GE AA  + E+EP+N    VL+SN+Y+ A +W + A  RR+MK   V KEPG S 
Sbjct: 597 GNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSW 656

Query: 619 VEVNGLVHKFI 629
           +E++  VH+F+
Sbjct: 657 IEMSSKVHRFM 667



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 153/522 (29%), Positives = 257/522 (49%), Gaps = 66/522 (12%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFK---FSYTNIIN------------------PLTR- 38
           +++ + ++ LE+ +Q HAH IKT F    F  T +++                  P  R 
Sbjct: 145 LRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDKRN 204

Query: 39  ---YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
              + ++VT Y +N     A+  +  MR  G E + FT P+IL AC  +     G ++HG
Sbjct: 205 HVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHG 264

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +++G   + +V +AL+ MYS+CG L +AR + + M   D VSW++MI G  R GL EE
Sbjct: 265 CIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEE 324

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE-KLGVAIATA 214
           AL + R M    ++  E    S+++ F+ V D+    ++H+ +V+   +  KL   +  A
Sbjct: 325 ALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKL---VNNA 381

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+DMY+K G   YA  +F ++    V+SWT +++G +      E +RLF EM    + P 
Sbjct: 382 LVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPD 441

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           +I I +++  C  +  L+ GK +HA  L++G   SL++ N+LV MY KC  I  A  +FD
Sbjct: 442 QIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFD 501

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M+ +DV+ W A+I  YAQ                 + R +             AG +E 
Sbjct: 502 SMEIQDVITWTALIVGYAQN---------------GRGRDH-------------AGLVEH 533

Query: 395 GK-WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGY 452
           G+ +  +  E  G++        ++D+  + G +  A  L ++ A+  D  +W A++A  
Sbjct: 534 GRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWKALLAAC 593

Query: 453 GMHG---CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
            +HG    GE A     ++E      N + ++ L N  S AG
Sbjct: 594 RVHGNVELGERAANNLFELE----PKNAVPYVLLSNLYSAAG 631



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 242/452 (53%), Gaps = 7/452 (1%)

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
           D D    N +I  Y+  G L  AR LF E P R  ++WS++I GY R G   EALE+  E
Sbjct: 69  DRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWE 128

Query: 163 MRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC 222
           M++   RP++    S++ + +    ++ GK IHA  ++   D      + T L+DMY+KC
Sbjct: 129 MQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSN--AFVVTGLVDMYAKC 186

Query: 223 GNLAYAKQLFN-RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
             +  A+ LF    ++ + V WT M++GY +  + ++ +  F +M  E +  ++ T  S+
Sbjct: 187 KCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSI 246

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +  CG +     G  +H  I+R+GF  ++ + +ALVDMY KC ++ +AR + + M+  D 
Sbjct: 247 LTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLETMEVDDP 306

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           + WN++I    +    ++A  LF  M +  ++ +E T   +L+  +    +     +H+ 
Sbjct: 307 VSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSL 366

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
           I K G E   ++  ALVDMYAK G  + A+ +F +   +D+  W +++ G   +G  EEA
Sbjct: 367 IVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEA 426

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMV 520
           L  F +M   G+ P+ I    +L+AC+   ++  GK V    +  GLG    +++   +V
Sbjct: 427 LRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDN--SLV 484

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
            +  + G +++A+++  SM ++ ++I W AL+
Sbjct: 485 SMYAKCGCIEDANKVFDSMEIQ-DVITWTALI 515



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 104/371 (28%), Positives = 168/371 (45%), Gaps = 42/371 (11%)

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN---------------------- 257
           SKCG +  A++LF+ +      SW  MI  Y     +N                      
Sbjct: 52  SKCGRVDDARKLFDVMPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLIS 111

Query: 258 ---------EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
                    E + LF EM  E   P++ T  S++  C     L+ GK +HA+ ++  F+ 
Sbjct: 112 GYCRYGCDVEALELFWEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDS 171

Query: 309 SLAMANALVDMYGKCREIRSARTLFD-GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
           +  +   LVDMY KC+ I  A  LF+     ++ ++W A+++ Y+Q     KA E F  M
Sbjct: 172 NAFVVTGLVDMYAKCKCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDM 231

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           +   +  N+ T   +L+ C    A   G  +H  I + G   +V + +ALVDMY+KCGD+
Sbjct: 232 RGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDL 291

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
           + A R+       D   WN+M+ G    G GEEAL  F  M    +K +  T+  +LN  
Sbjct: 292 SNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCF 351

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           S    V + ++     VH L +    E Y      +VD+  + G  D A ++ + M  + 
Sbjct: 352 S---FVMDMRNAMS--VHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDK- 405

Query: 544 NMIVWGALLAA 554
           ++I W +L+  
Sbjct: 406 DVISWTSLVTG 416



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 128/293 (43%), Gaps = 34/293 (11%)

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
           +L   +  ++   G   S + +N ++    KC  +  AR LFD M  +D   WN +I AY
Sbjct: 23  ELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDVMPDRDECSWNTMIGAY 82

Query: 352 AQA-------------------------------HCIDKAFELFIHMKVSKVRPNEVTMV 380
           A +                                C  +A ELF  M+    RPN+ T  
Sbjct: 83  ANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGERPNQFTWG 142

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI-Y 439
            +L +C+    LE GK +H +  K   + +  + T LVDMYAKC  +  A  LF  A   
Sbjct: 143 SVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFELAPDK 202

Query: 440 RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           R+  +W AM+ GY  +G G +A+  F DM   G++ N  TF  +L AC        G  V
Sbjct: 203 RNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQV 262

Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
              +V   G    +     +VD+  + G L  A  M+++M +  + + W +++
Sbjct: 263 HGCIVRS-GFGANVFVGSALVDMYSKCGDLSNARRMLETMEV-DDPVSWNSMI 313


>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
 gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  368 bits (944), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 201/593 (33%), Positives = 327/593 (55%), Gaps = 8/593 (1%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           INP+  ++ ++ +Y  N+    AL++Y  M  +G     +T P +LKACA +     GK 
Sbjct: 66  INPIA-WDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKL 124

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IH     +    D YV  AL+  Y++CG L  A  +FDEMP RD+V+W+ MI G+     
Sbjct: 125 IHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCC 184

Query: 153 PEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
             + + +  +MR +D + P+   ++ M         +  GKA+H    R      L   +
Sbjct: 185 LTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL--VV 242

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM-IEEN 270
            T ++D+Y+K   + YA+++F+   + + V+W+ MI GY+    I E   +F +M + +N
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDN 302

Query: 271 V-FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
           V   + + I  +++ C   G L  G+ +H Y ++ GF   L + N ++  Y K   +  A
Sbjct: 303 VAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDA 362

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
              F  +  KDV+ +N++I+        +++F LF  M+ S +RP+  T++G+L+ C+  
Sbjct: 363 FRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHL 422

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            AL  G   H Y    G  V+  +  AL+DMY KCG ++ A R+F     RDI  WN M+
Sbjct: 423 AALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTML 482

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG-LG 508
            G+G+HG G+EAL  F  M+ +GV P+ +T + +L+ACSH+GLV EGK +F+ M  G   
Sbjct: 483 FGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFN 542

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
           ++P+I+HY CM DLL RAG LDEA++ +  MP  P++ V G LL+A   +KN  +G   +
Sbjct: 543 VIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVS 602

Query: 569 TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
            ++  +        VL+SN Y+ A RW D A +R + K+  + K PG+S V+V
Sbjct: 603 KKMQSLGETTESL-VLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 146/492 (29%), Positives = 256/492 (52%), Gaps = 16/492 (3%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLD-GDAYVSNALIQMYSECGSLVSARYLFDEMPN 134
           ++L+ C +     LG+ IH   +K  L    + V   L ++Y+ C  +  AR++FDE+P+
Sbjct: 4   SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63

Query: 135 RDV--VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
             +  ++W  MIR Y      E+AL++  +M    +RP++     ++   A +  +D GK
Sbjct: 64  PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
            IH+ V  NC D    + + TAL+D Y+KCG L  A ++F+ + +  +V+W  MISG+  
Sbjct: 124 LIHSHV--NCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181

Query: 253 CNEINEGVRLFAEMIE-ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
              + + + LF +M   + + P+  TI+ +    G  G L+ GK +H Y  R GF   L 
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV 241

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM---- 367
           +   ++D+Y K + I  AR +FD    K+ + W+A+I  Y +   I +A E+F  M    
Sbjct: 242 VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND 301

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
            V+ V P  + ++  L  C   G L  G+ +H Y  K G  +D+ ++  ++  YAK G +
Sbjct: 302 NVAMVTPVAIGLI--LMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSL 359

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             A+R FSE   +D+  +N+++ G  ++   EE+   F +M  SG++P+  T +G+L AC
Sbjct: 360 CDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTAC 419

Query: 488 SHAGLVTEGKSVFDK-MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
           SH   +  G S     +VHG  +   I +   ++D+  + G LD A  +  +M  R +++
Sbjct: 420 SHLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDMYTKCGKLDVAKRVFDTMHKR-DIV 476

Query: 547 VWGALLAASKLH 558
            W  +L    +H
Sbjct: 477 SWNTMLFGFGIH 488


>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
          Length = 601

 Score =  367 bits (943), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 191/585 (32%), Positives = 331/585 (56%), Gaps = 4/585 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +NSLV++++ N     A      M ++G  ++  ++ +++ AC        G  IH 
Sbjct: 6   VVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHA 65

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+K GL+    ++NAL+ MY + G + ++  +FD M  ++ VSW++ I  +   G   +
Sbjct: 66  LAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGD 125

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            L + R+M   ++ P  + + S++    ++   DLG+ +H   ++   D  L + +A +L
Sbjct: 126 VLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMD--LDIFVANSL 183

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+K G+L  A  +F ++   +VVSW  MI+  ++     E  RL  +M +    P+ 
Sbjct: 184 VDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNS 243

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           IT+++++  C  +  L++GK +HA+ +R G  F L ++NAL+DMY KC ++  AR +F+ 
Sbjct: 244 ITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER 303

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
            +  DV  +N +I  Y+Q+    ++  LF  M+   +  + V+ +G LS CT     + G
Sbjct: 304 SEKDDVS-YNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHG 362

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           K +H  + ++ L     L  +L+D+Y K G +  A ++F++   +D+  WN M+ GYGMH
Sbjct: 363 KEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMH 422

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  + A   F  M+  G+  + +++I +L ACSH GLV +GK  F +MV    + P+  H
Sbjct: 423 GQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMV-AQNIEPQQMH 481

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y CMVDLLGRAG L +  E+I+ MP   N  VWGALL A ++H N  + + AA  + E++
Sbjct: 482 YACMVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELK 541

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
           P++ GY  LM N+YA   RWN+   +R++MK  +V+K P +S V+
Sbjct: 542 PEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWVQ 586



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/427 (28%), Positives = 224/427 (52%), Gaps = 5/427 (1%)

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           MP RDVVSW++++  +   G+  +A   +  M       +  +++S+V       +   G
Sbjct: 1   MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 60

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
            +IHA  V+   +    V +A AL+DMY K G++  + Q+F+ + + + VSW   I  ++
Sbjct: 61  LSIHALAVKVGLNTM--VNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFL 118

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
                 + +R+F +M E NV P  IT+ SL+     +G   LG+ +H Y ++   +  + 
Sbjct: 119 NAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIF 178

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           +AN+LVDMY K   +  A T+F+ MK ++V+ WNA+I+   Q     +AF L   M+ S 
Sbjct: 179 VANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSG 238

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
             PN +T+V +L  C    +L+MGK +H +  ++GL  D+ +  AL+DMY+KCG ++ A 
Sbjct: 239 ECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLAR 298

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
            +F  +   D+  +N ++ GY       E+L+ F  M   G+  + ++F+G L+AC++  
Sbjct: 299 NIFERSEKDDVS-YNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLS 357

Query: 492 LVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
           +   GK +   +V  L L         ++DL  + G+L  A ++   +  + ++  W  +
Sbjct: 358 VFKHGKEIHCVLVRRL-LSGHPFLSNSLLDLYTKGGMLVTASKIFNKIT-KKDVASWNTM 415

Query: 552 LAASKLH 558
           +    +H
Sbjct: 416 ILGYGMH 422


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  367 bits (943), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 205/601 (34%), Positives = 338/601 (56%), Gaps = 8/601 (1%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I  +  + SL++ Y +N      +++   M+  G   + FT  T+L A A   +   G +
Sbjct: 167 IKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQ 226

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H   +KNG +   +V NALI MY +   +  A  +FD M  RD V+W+ MI GY   G 
Sbjct: 227 VHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGF 286

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
             E  ++   MR   ++ S     + + L +   +++  K +H  VV+N  +      I 
Sbjct: 287 YLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYE--FAQDIR 344

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQ-NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
           TAL+  YSKC ++  A +LF+  +  ++VV+WT MI G+++ N   + V LF +M  E V
Sbjct: 345 TALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGV 404

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P+  T  +++   G    L     LHA I++  +E   ++A AL+D Y K   +  +  
Sbjct: 405 RPNHFTYSTVL--AGKPSSLL--SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESAR 460

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +F  + +KD++ W+A+++  AQ    +KA E+FI +    V+PNE T   +++ C+ + A
Sbjct: 461 VFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAA 520

Query: 392 -LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
            +E GK +H    K G    + + +AL+ MY+K G++  A ++F+    RDI  WN+M+ 
Sbjct: 521 TVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMIT 580

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           GYG HG  ++AL  F  M+  G+  + +TFIG+L AC+HAGLV EG+  F+ M+    + 
Sbjct: 581 GYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHID 640

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
            KIEHY CMVDL  RAG+ D+A ++I  MP   +  +W  LLAA ++H+N  +G++AA +
Sbjct: 641 KKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEK 700

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIR 630
           ++ ++P +    VL+SNI+AVA  W + A VR++M E +VKKE G S +E+   +  F+ 
Sbjct: 701 LVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLA 760

Query: 631 G 631
           G
Sbjct: 761 G 761



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 256/528 (48%), Gaps = 10/528 (1%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  ++ YN L+  + +NN    AL+++  +  +G  VD  T+   LK C  +    +G++
Sbjct: 66  LKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQ 125

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H  ++K+G   D  V  +L+ MY +       R +FDEM  ++VVSW++++ GY R GL
Sbjct: 126 VHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGL 185

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            +E + ++ +M+   + P+     +++   AD + ++ G  +HA +V+N    +    + 
Sbjct: 186 NDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN--GFEFTTFVC 243

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            ALI MY K   +  A+ +F+ +     V+W +MI GY       EG ++F  M    V 
Sbjct: 244 NALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVK 303

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
            S     + +  C     L   K LH  +++NG+EF+  +  AL+  Y KC  +  A  L
Sbjct: 304 LSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKL 363

Query: 333 FD-GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           F     + +V+ W A+I  + Q +  +KA +LF  M    VRPN  T   +L+       
Sbjct: 364 FSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLA----GKP 419

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
             +   LH  I K   E    + TAL+D Y K G+V  + R+F     +DI  W+AM+ G
Sbjct: 420 SSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTG 479

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC-SHAGLVTEGKSVFDKMVHGLGLV 510
                  E+A+  F+ + + GVKPN  TF  ++NAC S A  V  GK +    V   G  
Sbjct: 480 LAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKS-GKS 538

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             +     ++ +  + G ++ A ++      R +++ W +++     H
Sbjct: 539 NALCVSSALLTMYSKKGNIESAEKVFTRQEER-DIVSWNSMITGYGQH 585



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 235/476 (49%), Gaps = 33/476 (6%)

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           A  LFDE P +D+  ++ ++  + R     EAL + +++    +    + +   + +   
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 185 VADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
           + D  +G+ +H      C+  K G    V++ T+L+DMY K  +    + +F+ +   +V
Sbjct: 117 LFDQVVGRQVH------CQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV 170

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           VSWT ++SGY R    +E + L  +M  E V P+  T  +++        ++ G  +HA 
Sbjct: 171 VSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAM 230

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           I++NGFEF+  + NAL+ MY K   +  A  +FD M  +D + WN +I  YA      + 
Sbjct: 231 IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
           F++F  M+++ V+ +       L LC++   L   K LH  + K G E    ++TAL+  
Sbjct: 291 FQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVT 350

Query: 421 YAKCGDVNGAYRLFSEA-IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGIT 479
           Y+KC  V+ A++LFS A    ++  W AM+ G+  +   E+A+  F  M R GV+PN  T
Sbjct: 351 YSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFT 410

Query: 480 FIGLLNACS-------HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
           +  +L           HA ++   K+ ++K       VP +     ++D   + G + E+
Sbjct: 411 YSTVLAGKPSSLLSQLHAQII---KAYYEK-------VPSVA--TALLDAYVKTGNVVES 458

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMS 586
             +  S+P + +++ W A+L      ++         Q+++  ++P  Y ++ +++
Sbjct: 459 ARVFYSIPAK-DIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVIN 513



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 234/475 (49%), Gaps = 36/475 (7%)

Query: 10  LEQTRQCHAHIIKTHFKFSYTNIINPL-------------------------TRYNSLVT 44
           +E   Q HA I+K  F+F+ T + N L                           +N ++ 
Sbjct: 221 IEGGVQVHAMIVKNGFEFT-TFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIG 279

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
            Y           ++  MR  G ++      T LK C+Q    +  K++H   +KNG + 
Sbjct: 280 GYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEF 339

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEM-PNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
              +  AL+  YS+C S+  A  LF       +VV+W+ MI G+ +    E+A+++  +M
Sbjct: 340 AQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQM 399

Query: 164 RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCG 223
               +RP+     ++++         L   +HA +++    EK+  ++ATAL+D Y K G
Sbjct: 400 SREGVRPNHFTYSTVLA----GKPSSLLSQLHAQIIK-AYYEKVP-SVATALLDAYVKTG 453

Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLII 283
           N+  + ++F  +    +V+W+ M++G  +  +  + + +F ++++E V P+E T  S+I 
Sbjct: 454 NVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVIN 513

Query: 284 ECGFVGG-LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
            C      ++ GK +HA  +++G   +L +++AL+ MY K   I SA  +F   + +D++
Sbjct: 514 ACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIV 573

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTY 401
            WN++I+ Y Q     KA E+F  M+   +  ++VT +G+L+ CT AG +E G K+ +  
Sbjct: 574 SWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIM 633

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY-RDICMWNAMMAGYGMH 455
           I+   ++  +   + +VD+Y++ G  + A  + +   +     +W  ++A   +H
Sbjct: 634 IKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVH 688



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 184/364 (50%), Gaps = 17/364 (4%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           FS  +  + +  + +++  +++NN    A++++  M + G   ++FT  T+L      L+
Sbjct: 364 FSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL 423

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
           + L  +I    IK   +    V+ AL+  Y + G++V +  +F  +P +D+V+WS M+ G
Sbjct: 424 SQLHAQI----IKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTG 479

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMV-SLFADVADVDLGKAIHACVVRNCKDE 205
             +    E+A+EV  ++    ++P+E    S++ +  +  A V+ GK IHA  V++ K  
Sbjct: 480 LAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSN 539

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
            L   +++AL+ MYSK GN+  A+++F R  +  +VSW  MI+GY +  +  + + +F  
Sbjct: 540 AL--CVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQI 597

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           M  + +   ++T + ++  C   G ++ G K+ +  I     +  +   + +VD+Y +  
Sbjct: 598 MQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAG 657

Query: 325 EIRSARTLFDGMK-SKDVMIWNAVISAYAQAHC-IDKAFEL--FIHMKVSKVRPNEVTMV 380
               A  + +GM       IW  +++A     C + +  EL      K+  ++PN+    
Sbjct: 658 MFDKAMDIINGMPFPASPTIWRTLLAA-----CRVHRNLELGKLAAEKLVSLQPNDAVGY 712

Query: 381 GLLS 384
            LLS
Sbjct: 713 VLLS 716



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 158/367 (43%), Gaps = 13/367 (3%)

Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
           YA QLF+      +  +  ++  + R N   E + LF ++    +    +T+   +  CG
Sbjct: 56  YAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCG 115

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
            +    +G+ +H   L++GF   +++  +LVDMY K  +    R +FD M  K+V+ W +
Sbjct: 116 VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           ++S YA+    D+   L   M++  V PN  T   +L    +   +E G  +H  I K G
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
            E    +  AL+ MY K   V  A  +F   + RD   WN M+ GY   G   E    F 
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFH 295

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG-----CMVD 521
            M  +GVK +   F   L  CS    +      F K +H  G+V     +       ++ 
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELN-----FTKQLH-CGVVKNGYEFAQDIRTALMV 349

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNY 579
              +   +DEA ++        N++ W A++     + N         Q+    + P ++
Sbjct: 350 TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHF 409

Query: 580 GYNVLMS 586
            Y+ +++
Sbjct: 410 TYSTVLA 416



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 84/173 (48%)

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
           R A  LFD    KD+  +N ++  +++ +   +A  LF  +  S +  + +T+   L +C
Sbjct: 55  RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
                  +G+ +H    K G   DV + T+LVDMY K  D      +F E   +++  W 
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           ++++GY  +G  +E +     M+  GV PNG TF  +L A +   ++  G  V
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQV 227


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 200/593 (33%), Positives = 329/593 (55%), Gaps = 8/593 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + SL+T YI++   S  + ++  MR  G   ++ T  ++L   A   M  LG+ +H  ++
Sbjct: 173 WTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSV 232

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G     +V N+L+ MY++CG +  AR +F  M  RD+VSW+T++ G    G   EAL+
Sbjct: 233 KFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQ 292

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  + R      ++    +++ L A++  + L + +H+ V++        V   TAL+D 
Sbjct: 293 LFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVM--TALMDA 350

Query: 219 YSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           YSK G L  A  +F  ++   +VVSWT MI+G I+  ++     LF+ M E+ V P++ T
Sbjct: 351 YSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPNDFT 410

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             +++          L   +HA +++  +E +  +  AL+  Y K      A ++F  + 
Sbjct: 411 YSTILT----ASVASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMID 466

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA-LEMGK 396
            KDV+ W+A+++ YAQA   D A  +FI M +  ++PNE T+  ++  C    A +++G+
Sbjct: 467 QKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGR 526

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
             H    K      + + +ALV MYA+ G +  A  +F     RD+  WN+M++GY  HG
Sbjct: 527 QFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHG 586

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             ++AL  F  ME  G++ +G+TF+ ++  C+HAGLV EG+  FD M    G+ P +EHY
Sbjct: 587 YSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHY 646

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            CMVDL  RAG LDEA  +I+ M      +VW  LL A K+HKN  +G++AA ++L +EP
Sbjct: 647 ACMVDLYSRAGKLDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEP 706

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            +    VL+SNIY+ A +W +   VR++M   +VKKE G S +++   VH FI
Sbjct: 707 FDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFI 759



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 139/503 (27%), Positives = 247/503 (49%), Gaps = 19/503 (3%)

Query: 63  RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD-GDAYVSNALIQMYSECGS 121
           R +G  V    +  +LK C  V    LGK++HG  I+ G D GD  V  +L+ MY +  S
Sbjct: 95  RCHGGRVGGGALVGVLKVCGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHS 154

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           +V  R +F+ MP R+VV+W++++ GY + G   + +E+   MR   + P+ V   S++S+
Sbjct: 155 VVDGRKVFEAMPKRNVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSV 214

Query: 182 FADVADVDLGKAIHACVVR-NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
            A    VDLG+ +HA  V+  C      V +  +L++MY+KCG +  A+ +F  +    +
Sbjct: 215 VASQGMVDLGRRVHAQSVKFGCCST---VFVCNSLMNMYAKCGLVEEARVVFCGMETRDM 271

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           VSW  +++G +      E ++LF +        ++ T  ++I  C  +  L L + LH+ 
Sbjct: 272 VSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSS 331

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISAYAQAHCIDK 359
           +L+ GF     +  AL+D Y K  ++ +A  +F  M  S++V+ W A+I+   Q   +  
Sbjct: 332 VLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPL 391

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVD 419
           A  LF  M+   V PN+ T   +L+    A    +   +H  + K   E   I+ TAL+ 
Sbjct: 392 AAALFSRMREDGVAPNDFTYSTILT----ASVASLPPQIHAQVIKTNYECTSIVGTALLA 447

Query: 420 MYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGIT 479
            Y+K  +   A  +F     +D+  W+AM+  Y   G  + A   F+ M   G+KPN  T
Sbjct: 448 SYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPNEFT 507

Query: 480 FIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC----MVDLLGRAGLLDEAHEM 535
              +++AC+     T G  +  +  H + +  +     C    +V +  R G ++ A  +
Sbjct: 508 ISSVIDACASP---TAGVDL-GRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCI 563

Query: 536 IKSMPLRPNMIVWGALLAASKLH 558
            +    R +++ W ++L+    H
Sbjct: 564 FERQTDR-DLVSWNSMLSGYAQH 585



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 202/401 (50%), Gaps = 9/401 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N+L+   + N     AL ++   R + + +   T  T++K CA +    L +++H 
Sbjct: 271 MVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHS 330

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMIRGYHRGGLPE 154
             +K G      V  AL+  YS+ G L +A  +F  M  +++VVSW+ MI G  + G   
Sbjct: 331 SVLKRGFHSYGNVMTALMDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVP 390

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
            A  +   MR   + P++    ++  L A VA   L   IHA V++   + +    + TA
Sbjct: 391 LAAALFSRMREDGVAPNDFTYSTI--LTASVA--SLPPQIHAQVIKT--NYECTSIVGTA 444

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+  YSK  N   A  +F  ++Q  VVSW+ M++ Y +  + +    +F +M    + P+
Sbjct: 445 LLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDSDGATNIFIKMTMHGLKPN 504

Query: 275 EITILSLIIECGF-VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           E TI S+I  C     G+ LG+  HA  +++    +L +++ALV MY +   I SA+ +F
Sbjct: 505 EFTISSVIDACASPTAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIESAQCIF 564

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           +    +D++ WN+++S YAQ     KA ++F  M+   +  + VT + ++  C  AG +E
Sbjct: 565 ERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQMEAEGIEMDGVTFLSVIMGCAHAGLVE 624

Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
            G ++  +     G+   +     +VD+Y++ G ++ A  L
Sbjct: 625 EGQRYFDSMARDYGITPTMEHYACMVDLYSRAGKLDEAMSL 665



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 192/369 (52%), Gaps = 15/369 (4%)

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI------RPSEVAMISM 178
           AR  FDE+P+R+ +  +  +  + R G   +AL+      F+D+      R    A++ +
Sbjct: 57  ARQAFDEIPHRNTLDHA--LFDHARRGSVHQALD-----HFLDVHRCHGGRVGGGALVGV 109

Query: 179 VSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
           + +   V D  LGK +H   +R C  ++  V + T+L+DMY K  ++   +++F  + + 
Sbjct: 110 LKVCGSVPDRVLGKQLHGLCIR-CGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKR 168

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
           +VV+WT +++GYI+   +++ + LF  M  E V+P+ +T  S++      G + LG+ +H
Sbjct: 169 NVVTWTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVH 228

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
           A  ++ G   ++ + N+L++MY KC  +  AR +F GM+++D++ WN +++         
Sbjct: 229 AQSVKFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDL 288

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALV 418
           +A +LF   + S     + T   ++ LC     L + + LH+ + K+G      + TAL+
Sbjct: 289 EALQLFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALM 348

Query: 419 DMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
           D Y+K G +  A  +F   +  +++  W AM+ G   +G    A   F  M   GV PN 
Sbjct: 349 DAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPND 408

Query: 478 ITFIGLLNA 486
            T+  +L A
Sbjct: 409 FTYSTILTA 417



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 146/309 (47%), Gaps = 12/309 (3%)

Query: 285 CGFVGGLQLGKWLHAYILRNGFEF-SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
           CG V    LGK LH   +R G +   + +  +LVDMY K   +   R +F+ M  ++V+ 
Sbjct: 113 CGSVPDRVLGKQLHGLCIRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAMPKRNVVT 172

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           W ++++ Y Q   +    ELF  M+   V PN VT   +LS+    G +++G+ +H    
Sbjct: 173 WTSLLTGYIQDGALSDVMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSV 232

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
           K G    V +  +L++MYAKCG V  A  +F     RD+  WN +MAG  ++G   EAL 
Sbjct: 233 KFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQ 292

Query: 464 FFVDMERSGVKPNGITFIGLLNACS---HAGLVTE-GKSVFDKMVHGLGLVPKIEHYGCM 519
            F D   S       T+  ++  C+     GL  +   SV  +  H  G V        +
Sbjct: 293 LFHDSRSSITMLTQSTYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNV-----MTAL 347

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQ 577
           +D   +AG L  A ++   M    N++ W A++     + +  +     +++ E  + P 
Sbjct: 348 MDAYSKAGQLGNALDIFLLMSGSQNVVSWTAMINGCIQNGDVPLAAALFSRMREDGVAPN 407

Query: 578 NYGYNVLMS 586
           ++ Y+ +++
Sbjct: 408 DFTYSTILT 416


>gi|242076522|ref|XP_002448197.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
 gi|241939380|gb|EES12525.1| hypothetical protein SORBIDRAFT_06g022800 [Sorghum bicolor]
          Length = 766

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 198/599 (33%), Positives = 342/599 (57%), Gaps = 6/599 (1%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           NP++ + +++ ++ +N++ + A+ +++ M ++G+  D F + + + AC+++    LG+++
Sbjct: 112 NPVS-WAAVIAAHAQNSRCADAMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQV 170

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           H  AIK     D  V NAL+ MYS+ GS+     LF+ + ++D++SW ++I G  + G  
Sbjct: 171 HAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGRE 230

Query: 154 EEALEVMREMRFMDIR-PSEVAMISMVSLFADVAD-VDLGKAIHACVVRNCKDEKLGVAI 211
            +AL++ REM    +  P+E    S+    + V + ++ G+ IH   V+   D       
Sbjct: 231 MDALQIFREMIAEGVHHPNEFHFGSVFRACSVVVNSLEYGEQIHGVSVKYQLDRN--SYA 288

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
             +L DMY++C  L  A+++F R+    +VSW  +I+ +     ++E + LF+EM +  +
Sbjct: 289 GCSLSDMYARCNELDSARKVFYRIESPDLVSWNSLINAFSAKGLLSEAMVLFSEMRDSGL 348

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P  IT+++L+  C     L  G+ +H+Y+++ G    + ++N+L+ MY +C +  SA  
Sbjct: 349 RPDGITVMALLCACVGYDALHQGRSIHSYLVKLGLGGDVIVSNSLLSMYARCLDFSSAMD 408

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +F     +DV+ WN++++A  Q   ++  F+LF  +  S    + +++  +LS   E G 
Sbjct: 409 VFHETHDRDVVTWNSILTACVQHQHLEDVFKLFSLLHRSMPSLDRISLNNVLSASAELGY 468

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS-EAIYRDICMWNAMMA 450
            EM K +H Y  K GL  D +L   L+D YAKCG ++ A +LF      RD+  W++++ 
Sbjct: 469 FEMVKQVHAYAFKVGLVGDAMLSNGLIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIV 528

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           GY   G  +EAL  F  M   GVKPN +TF+G+L ACS  GLV EG   +  M    G+V
Sbjct: 529 GYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLTACSRVGLVDEGCYYYSIMKPEYGIV 588

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           P  EH  C++DLL RAG L EA + +  MP  P++I+W  LLAAS+ H +  MG+ AA  
Sbjct: 589 PTREHCSCVLDLLARAGRLSEAAKFVDQMPFEPDIIMWKTLLAASRTHNDVDMGKRAAEG 648

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +L I+P +    VL+ NIYA +  WN+ A +++ M+   V+K PG S +++ G +  FI
Sbjct: 649 VLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVFI 707



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 232/447 (51%), Gaps = 5/447 (1%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           +SN LI MY  CG+  SAR +FD M +R+ VSW+ +I  + +     +A+ +   M    
Sbjct: 84  LSNHLITMYGRCGAPDSARVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSG 143

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
             P + A+ S +   +++ D+ LG+ +HA  ++      L   +  AL+ MYSK G++  
Sbjct: 144 TMPDQFALGSAICACSELGDLGLGRQVHAQAIKWESGSDL--IVQNALVTMYSKSGSVGD 201

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV-FPSEITILSLIIECG 286
              LF R+    ++SW  +I+G  +     + +++F EMI E V  P+E    S+   C 
Sbjct: 202 GFALFERIRDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACS 261

Query: 287 -FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
             V  L+ G+ +H   ++   + +     +L DMY +C E+ SAR +F  ++S D++ WN
Sbjct: 262 VVVNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWN 321

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
           ++I+A++    + +A  LF  M+ S +RP+ +T++ LL  C    AL  G+ +H+Y+ K 
Sbjct: 322 SLINAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVKL 381

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
           GL  DVI+  +L+ MYA+C D + A  +F E   RD+  WN+++     H   E+    F
Sbjct: 382 GLGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDRDVVTWNSILTACVQHQHLEDVFKLF 441

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
             + RS    + I+   +L+A +  G     K V       +GLV        ++D   +
Sbjct: 442 SLLHRSMPSLDRISLNNVLSASAELGYFEMVKQVH-AYAFKVGLVGDAMLSNGLIDTYAK 500

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALL 552
            G LD+A+++ + M    ++  W +L+
Sbjct: 501 CGSLDDANKLFEIMGTGRDVFSWSSLI 527



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 192/399 (48%), Gaps = 20/399 (5%)

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           ++  LI MY +CG    A+ +F+ +   + VSW  +I+ + + +   + + LF+ M+   
Sbjct: 84  LSNHLITMYGRCGAPDSARVVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRSG 143

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
             P +  + S I  C  +G L LG+ +HA  ++      L + NALV MY K   +    
Sbjct: 144 TMPDQFALGSAICACSELGDLGLGRQVHAQAIKWESGSDLIVQNALVTMYSKSGSVGDGF 203

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV-RPNEVTMVGLLSLCT-E 388
            LF+ ++ KD++ W ++I+  AQ      A ++F  M    V  PNE     +   C+  
Sbjct: 204 ALFERIRDKDLISWGSIIAGLAQQGREMDALQIFREMIAEGVHHPNEFHFGSVFRACSVV 263

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
             +LE G+ +H    K  L+ +     +L DMYA+C +++ A ++F      D+  WN++
Sbjct: 264 VNSLEYGEQIHGVSVKYQLDRNSYAGCSLSDMYARCNELDSARKVFYRIESPDLVSWNSL 323

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +  +   G   EA++ F +M  SG++P+GIT + LL AC     + +G+S+   +V  LG
Sbjct: 324 INAFSAKGLLSEAMVLFSEMRDSGLRPDGITVMALLCACVGYDALHQGRSIHSYLVK-LG 382

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA-------------- 554
           L   +     ++ +  R      A ++      R +++ W ++L A              
Sbjct: 383 LGGDVIVSNSLLSMYARCLDFSSAMDVFHETHDR-DVVTWNSILTACVQHQHLEDVFKLF 441

Query: 555 SKLHKN-PSMGEIAATQILEIEPQNYGYNVLMSNIYAVA 592
           S LH++ PS+  I+   +L    +  GY  ++  ++A A
Sbjct: 442 SLLHRSMPSLDRISLNNVLSASAE-LGYFEMVKQVHAYA 479



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 143/281 (50%), Gaps = 17/281 (6%)

Query: 285 CGFVGGLQLGKWLHAYIL----RNGF-EFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           C  +  L  G+ +H ++L    R+ F   +  ++N L+ MYG+C    SAR +FDGM  +
Sbjct: 52  CSRLRSLPQGRLVHRHLLASSARDRFLAHNTILSNHLITMYGRCGAPDSARVVFDGMLDR 111

Query: 340 DVMIWNAVISAYAQ-AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           + + W AVI+A+AQ + C D A  LF  M  S   P++  +   +  C+E G L +G+ +
Sbjct: 112 NPVSWAAVIAAHAQNSRCAD-AMGLFSSMLRSGTMPDQFALGSAICACSELGDLGLGRQV 170

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    K     D+I++ ALV MY+K G V   + LF     +D+  W +++AG    G  
Sbjct: 171 HAQAIKWESGSDLIVQNALVTMYSKSGSVGDGFALFERIRDKDLISWGSIIAGLAQQGRE 230

Query: 459 EEALIFFVDMERSGV-KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE--- 514
            +AL  F +M   GV  PN   F  +  ACS    V      + + +HG+ +  +++   
Sbjct: 231 MDALQIFREMIAEGVHHPNEFHFGSVFRACS----VVVNSLEYGEQIHGVSVKYQLDRNS 286

Query: 515 HYGC-MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           + GC + D+  R   LD A ++   +   P+++ W +L+ A
Sbjct: 287 YAGCSLSDMYARCNELDSARKVFYRIE-SPDLVSWNSLINA 326


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 191/603 (31%), Positives = 331/603 (54%), Gaps = 2/603 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +++++  Y++N++    L ++  M K G  V   T  ++ ++CA +    LG ++HG
Sbjct: 204 LVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHG 263

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+K+    D+ +  A + MY++C  +  A  +F+ +PN    S++ +I GY R     +
Sbjct: 264 HALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLK 323

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL++ + ++  ++   E+++   ++  + +     G  +H   V+ C      + +A  +
Sbjct: 324 ALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHGLAVK-C-GLGFNICVANTI 381

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY KCG L  A  +F  + +   VSW  +I+ + +  EI + + LF  M+   + P +
Sbjct: 382 LDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDD 441

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T  S++  C     L  G  +H  I+++G      + +ALVDMYGKC  +  A  +   
Sbjct: 442 FTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHAR 501

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++ K  + WN++IS ++     + A   F  M    + P+  T   +L +C     +E+G
Sbjct: 502 LEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELG 561

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           K +H  I K  L  DV + + LVDMY+KCG++  +  +F +A  RD   W+AM+  Y  H
Sbjct: 562 KQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYH 621

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G GE+A+  F +M+   VKPN   FI +L AC+H G V +G   F KM+   GL P++EH
Sbjct: 622 GLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEH 681

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y CMVDLLGR+G ++EA ++I+SMP   + ++W  LL+  K+  N  + E A   +L+++
Sbjct: 682 YSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLD 741

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
           PQ+    VL++N+YA+   W +VA +R +MK  ++KKEPG S +EV   VH F+ G   +
Sbjct: 742 PQDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAH 801

Query: 636 WKS 638
            +S
Sbjct: 802 PRS 804



 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 158/563 (28%), Positives = 283/563 (50%), Gaps = 15/563 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +NSL++ Y+ N     ++ I+  MR      D  T   ILKAC+ +    LG ++H 
Sbjct: 103 VVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHC 162

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            AI+ G + D    +AL+ MYS+C  L  A  +F EMP R++V WS +I GY +     E
Sbjct: 163 LAIQMGFENDVVTGSALVDMYSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIE 222

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            L++ ++M  + +  S+    S+    A ++   LG  +H   +++  D      I TA 
Sbjct: 223 GLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKS--DFAYDSIIGTAT 280

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+KC  +  A ++FN L      S+  +I GY R ++  + + +F  +   N+   E
Sbjct: 281 LDMYAKCERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDE 340

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           I++   +  C  +     G  LH   ++ G  F++ +AN ++DMYGKC  +  A  +F+ 
Sbjct: 341 ISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEE 400

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M+ +D + WNA+I+A+ Q   I K   LF+ M  S + P++ T   ++  C    AL  G
Sbjct: 401 MERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYG 460

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H  I K G+ +D  + +ALVDMY KCG +  A ++ +    +    WN++++G+   
Sbjct: 461 TEIHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQ 520

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
              E A  +F  M   G+ P+  T+  +L+ C++   +  GK +  +++  L L   +  
Sbjct: 521 KQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILK-LQLHSDVYI 579

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT-----Q 570
              +VD+  + G + ++  M +  P R + + W A++ A   H    +GE A       Q
Sbjct: 580 ASTLVDMYSKCGNMQDSRLMFEKAPKR-DYVTWSAMICAYAYH---GLGEKAINLFEEMQ 635

Query: 571 ILEIEPQNYGYNVLMSNIYAVAN 593
           +L ++P    + + +S + A A+
Sbjct: 636 LLNVKP---NHTIFISVLRACAH 655



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 144/548 (26%), Positives = 265/548 (48%), Gaps = 39/548 (7%)

Query: 72  FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSEC------------ 119
            T   IL+ C+ +   + GK++H   I  G     YV+N L+Q Y +             
Sbjct: 7   LTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDR 66

Query: 120 -------------------GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
                              G++  A+ LFD MP RDVVSW++++  Y   G+  +++E+ 
Sbjct: 67  MPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
             MR + I         ++   + + D  LG  +H   ++   +    V   +AL+DMYS
Sbjct: 127 VRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFEND--VVTGSALVDMYS 184

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           KC  L  A ++F  + + ++V W+ +I+GY++ +   EG++LF +M++  +  S+ T  S
Sbjct: 185 KCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           +   C  +   +LG  LH + L++ F +   +  A +DMY KC  +  A  +F+ + +  
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPP 304

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
              +NA+I  YA+     KA ++F  ++ + +  +E+++ G L+ C+       G  LH 
Sbjct: 305 RQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQLHG 364

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
              K GL  ++ +   ++DMY KCG +  A  +F E   RD   WNA++A +  +    +
Sbjct: 365 LAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEIVK 424

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCM 519
            L  FV M RS ++P+  T+  ++ AC+    +  G  +  +++  G+GL   +     +
Sbjct: 425 TLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVG--SAL 482

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQ 577
           VD+ G+ G+L EA E I +       + W ++++     K     +   +Q+LE  I P 
Sbjct: 483 VDMYGKCGMLMEA-EKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPD 541

Query: 578 NYGYNVLM 585
           NY Y  ++
Sbjct: 542 NYTYATVL 549



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 222/425 (52%), Gaps = 6/425 (1%)

Query: 35  PLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL-GKEI 93
           P   YN+++  Y + ++   AL+I+  +++N    D  ++   L AC+ V+  HL G ++
Sbjct: 304 PRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACS-VIKRHLEGIQL 362

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG A+K GL  +  V+N ++ MY +CG+L+ A  +F+EM  RD VSW+ +I  + +    
Sbjct: 363 HGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEI 422

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            + L +   M    + P +    S+V   A    ++ G  IH  ++++     L   + +
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKS--GMGLDWFVGS 480

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMY KCG L  A+++  RL + + VSW  +ISG+    +     R F++M+E  + P
Sbjct: 481 ALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIP 540

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T  +++  C  +  ++LGK +HA IL+      + +A+ LVDMY KC  ++ +R +F
Sbjct: 541 DNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMF 600

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           +    +D + W+A+I AYA     +KA  LF  M++  V+PN    + +L  C   G ++
Sbjct: 601 EKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVD 660

Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAG 451
            G  +    +   GL+  +   + +VD+  + G VN A +L     +  D  +W  +++ 
Sbjct: 661 KGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSN 720

Query: 452 YGMHG 456
             M G
Sbjct: 721 CKMQG 725



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 137/306 (44%), Gaps = 44/306 (14%)

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           ++T   ++ +C  +  L  GK +H  ++  GF  ++ +AN L+  Y K  ++  A  +FD
Sbjct: 6   KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65

Query: 335 GMKSKDVMIWNAVISAYA-------QAHCID------------------------KAFEL 363
            M  +DV+ WN +I  YA            D                        K+ E+
Sbjct: 66  RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F+ M+  K+  +  T   +L  C+      +G  +H    + G E DV+  +ALVDMY+K
Sbjct: 126 FVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
           C  ++ A+R+F E   R++  W+A++AGY  +    E L  F DM + G+  +  T+  +
Sbjct: 186 CKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245

Query: 484 LNACSHAGLVTEGKSVFD--KMVHGLGLVPKIEHYGCM----VDLLGRAGLLDEAHEMIK 537
             +C+       G S F     +HG  L     +   +    +D+  +   + +A ++  
Sbjct: 246 FRSCA-------GLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFN 298

Query: 538 SMPLRP 543
           ++P  P
Sbjct: 299 TLPNPP 304



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 41/214 (19%)

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
           ++T   +L  C+   AL  GK +HT +   G    + +   L+  Y K   +N A+++F 
Sbjct: 6   KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFD 65

Query: 436 EAIYRDICMWNAMMAGYG------------------------------MH-GCGEEALIF 464
               RD+  WN ++ GY                               +H G   +++  
Sbjct: 66  RMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEI 125

Query: 465 FVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMV 520
           FV M    +  +  TF  +L ACS  G+   G  +    VH L +    E+       +V
Sbjct: 126 FVRMRSLKIPHDYATFAVILKACS--GIEDYGLGL---QVHCLAIQMGFENDVVTGSALV 180

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           D+  +   LD+A  + + MP R N++ W A++A 
Sbjct: 181 DMYSKCKKLDDAFRVFREMPER-NLVCWSAVIAG 213


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 207/593 (34%), Positives = 332/593 (55%), Gaps = 8/593 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + SL+T Y++    S  + ++  MR  G   + FT  ++L A A      LG+ +H  ++
Sbjct: 169 WTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSV 228

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G     +V N+LI MYS+CG +  A+ +F +M  RD+VSW+T++ G        EAL+
Sbjct: 229 KFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQ 288

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  + R    + S+    +++ L A++  + L + +H+CV+++       V   TA++D 
Sbjct: 289 LFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVM--TAIMDA 346

Query: 219 YSKCGNLAYAKQLFNRL-NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           YSKCG L  A  +F  +    +VVSWT MI G I+  +I     LF+ M E+NV P+E T
Sbjct: 347 YSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFT 406

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             +++     +    L   +HA I++  ++ + ++  AL+  Y K      A ++F  + 
Sbjct: 407 YSTVLTASIPI----LLPQIHAQIIKTNYQHAPSVGTALLASYSKLGNTEEALSIFKMID 462

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA-LEMGK 396
            KDV+ W+A++S Y+QA   D A  +FI M +  ++PNE T+   +  C    A ++ G+
Sbjct: 463 HKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGR 522

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
             H    K   +  + + +ALV MYA+ G ++ A  +F     RD+  WN+M++GY  HG
Sbjct: 523 QFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHG 582

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             +EAL  F  ME  G++ +G TF+ ++  C+HAGLV EG+  FD MV    + P +EHY
Sbjct: 583 YSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHY 642

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            CMVDL  RAG LDE   +I+ MP     +VW  LL A ++HKN  +G++AA ++L +EP
Sbjct: 643 SCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGKLAAQKLLLLEP 702

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            +    VL+SNIYA A RW +   VR++M   +VKKE G S +++   VH FI
Sbjct: 703 DDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKVHSFI 755



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 140/512 (27%), Positives = 250/512 (48%), Gaps = 22/512 (4%)

Query: 55  ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD-GDAYVSNALI 113
           AL+ +  + + G  V    +  +LK C  +     G+++H   +K G D  +  V  AL+
Sbjct: 84  ALDHFVDVHRCG-RVQGAAVSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALV 142

Query: 114 QMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEV 173
            MY +CG +   R +F+ MP R+VV+W++++ GY +G    + + +   MR   + P+  
Sbjct: 143 DMYMKCGGVEDGRVVFEGMPKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPF 202

Query: 174 AMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALIDMYSKCGNLAYAKQLF 232
              S++S  A    VDLG+ +HA  V+  C+     V +  +LI+MYSKCG +  AK +F
Sbjct: 203 TFTSVLSAVASQGAVDLGRRVHAQSVKFGCRST---VFVCNSLINMYSKCGLVEEAKAVF 259

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
            ++    +VSW  +++G +      E ++LF +        S+ T  ++I  C  +  L 
Sbjct: 260 RQMETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLA 319

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISAY 351
           L + LH+ +L++GF     +  A++D Y KC E+  A  +F  M  S++V+ W A+I   
Sbjct: 320 LARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGC 379

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
            Q   I  A  LF  M+   V+PNE T   +L+    A    +   +H  I K   +   
Sbjct: 380 IQNADIPLAAALFSRMREDNVKPNEFTYSTVLT----ASIPILLPQIHAQIIKTNYQHAP 435

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
            + TAL+  Y+K G+   A  +F    ++D+  W+AM++ Y   G  + A   F+ M   
Sbjct: 436 SVGTALLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQ 495

Query: 472 GVKPNGITFIGLLNAC-SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC----MVDLLGRA 526
           G+KPN  T    ++AC S    + +G+       H + +  + +   C    +V +  R 
Sbjct: 496 GMKPNEFTISSAIDACASPTAGIDQGRQ-----FHAISIKYRYQDAICVGSALVTMYARK 550

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           G +D A  + +    R +++ W ++++    H
Sbjct: 551 GSIDSARIVFERQTDR-DLVSWNSMISGYAQH 581



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 212/424 (50%), Gaps = 10/424 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N+L+   + N     AL ++   R + +++   T  T++K CA +    L +++H 
Sbjct: 267 MVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHS 326

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMIRGYHRGGLPE 154
             +K+G   D  V  A++  YS+CG L  A  +F  MP +++VVSW+ MI G  +     
Sbjct: 327 CVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIP 386

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
            A  +   MR  +++P+E    ++++    +    L   IHA +++   + +   ++ TA
Sbjct: 387 LAAALFSRMREDNVKPNEFTYSTVLTASIPI----LLPQIHAQIIKT--NYQHAPSVGTA 440

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+  YSK GN   A  +F  ++   VV+W+ M+S Y +  + +    +F +M  + + P+
Sbjct: 441 LLASYSKLGNTEEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPN 500

Query: 275 EITILSLIIECGF-VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           E TI S I  C     G+  G+  HA  ++  ++ ++ + +ALV MY +   I SAR +F
Sbjct: 501 EFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVF 560

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           +    +D++ WN++IS YAQ     +A + F  M+   +  +  T + ++  CT AG ++
Sbjct: 561 ERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVK 620

Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM-WNAMMAG 451
            G ++  + +    +   +   + +VD+Y++ G ++    L     +    M W  ++  
Sbjct: 621 EGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGA 680

Query: 452 YGMH 455
             +H
Sbjct: 681 CRVH 684



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 190/372 (51%), Gaps = 16/372 (4%)

Query: 125 ARYLFDEMPNRDVVSWST----MIRGYHRGGLPE-EALEVMREMRFMDI----RPSEVAM 175
           AR   D MP+RD  + S+     I  Y R G    EAL+      F+D+    R    A+
Sbjct: 48  ARQALDGMPSRDAAAGSSSNPVAIVDYGRRGKGRGEALD-----HFVDVHRCGRVQGAAV 102

Query: 176 ISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL 235
             ++ +   + D   G+ +H C+   C  ++  V + TAL+DMY KCG +   + +F  +
Sbjct: 103 SRVLKVCGLIPDRVSGEQLH-CLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGM 161

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
            + +VV+WT +++GY++    ++ + LF  M  E V+P+  T  S++      G + LG+
Sbjct: 162 PKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGR 221

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
            +HA  ++ G   ++ + N+L++MY KC  +  A+ +F  M+++D++ WN +++      
Sbjct: 222 RVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNE 281

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
              +A +LF   + S  + ++ T   ++ LC     L + + LH+ + K G   D  + T
Sbjct: 282 HQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMT 341

Query: 416 ALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
           A++D Y+KCG+++ A+ +F      +++  W AM+ G   +     A   F  M    VK
Sbjct: 342 AIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVK 401

Query: 475 PNGITFIGLLNA 486
           PN  T+  +L A
Sbjct: 402 PNEFTYSTVLTA 413



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 149/306 (48%), Gaps = 6/306 (1%)

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFS-LAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
           CG +     G+ LH   ++ GF+ + + +  ALVDMY KC  +   R +F+GM  ++V+ 
Sbjct: 109 CGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGMPKRNVVT 168

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           W ++++ Y Q         LF  M+   V PN  T   +LS     GA+++G+ +H    
Sbjct: 169 WTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSV 228

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
           K G    V +  +L++MY+KCG V  A  +F +   RD+  WN +MAG  ++    EAL 
Sbjct: 229 KFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGLLLNEHQLEALQ 288

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDL 522
            F D   S  K +  T+  ++  C++   +   + +   ++ HG      +     ++D 
Sbjct: 289 LFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNV--MTAIMDA 346

Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYG 580
             + G LD+A  +   MP   N++ W A++     + +  +     +++ E  ++P  + 
Sbjct: 347 YSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFT 406

Query: 581 YNVLMS 586
           Y+ +++
Sbjct: 407 YSTVLT 412


>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 722

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 210/619 (33%), Positives = 337/619 (54%), Gaps = 10/619 (1%)

Query: 16  CHAHI-IKTHFKFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT 73
           C+A++ +  H    + ++I+P LT +N+++ +  +  +    L +Y  M       D  T
Sbjct: 68  CYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEET 127

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
            P +L++C+       G+ IHG+ +K G D    V+ AL +MY EC    +A  LFD+  
Sbjct: 128 YPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRS 187

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
            +D+   S++     +    E    V   M    + P      +++   A +  + L K 
Sbjct: 188 VKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKI 247

Query: 194 IH--ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           +H  A V +   D    + + TA++ +YSK  +L  A++LF+++ +   V W +MI+ Y 
Sbjct: 248 VHCIAIVSKLSGD----LLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYA 303

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           R  +  E + LF  M    +     T L +I     +  +  GK  HA+ILRNG +  ++
Sbjct: 304 REGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVS 363

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           + N+L+DMY +C+ + SA  +F+ M  K V+ W+A+I  Y +      A  LF  MK   
Sbjct: 364 VHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDG 423

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           ++ + V M+ +L      GALE  K+LH Y  K GL     L TAL+  YAKCG +  A 
Sbjct: 424 IQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQ 483

Query: 432 RLFSEAIY--RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           RLF E     +D+ MWN+M++ +  HG   +    +  M+ S  KP+ +TF+GLL AC +
Sbjct: 484 RLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVN 543

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           +GLV +GK  F +M    G  P  EHY CMV+LLGRAGL+ EA E++K+MP++P+  VWG
Sbjct: 544 SGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWG 603

Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR 609
            LL+A K+H    + E AA +++ +EP+N G  +L+SNIYA A +W+ VA +R  ++   
Sbjct: 604 PLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRNKG 663

Query: 610 VKKEPGFSSVEVNGLVHKF 628
           +KK PG S +E+NG V +F
Sbjct: 664 LKKIPGCSWLEINGHVTEF 682



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 237/489 (48%), Gaps = 11/489 (2%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           T+  +   C  +   HL ++IH   I +G   +  +S+ LI  Y+  G L  +  +F  +
Sbjct: 29  TLSLLFSRCNSI--QHL-QQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSV 85

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
            + ++  ++ ++R   R G  E  L V ++M    + P E     ++   +  ++V  G+
Sbjct: 86  IDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGR 145

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
            IH  +V+   D  L   +ATAL +MY +C     A QLF++ +    + W   ++    
Sbjct: 146 TIHGYLVKLGFD--LFDVVATALAEMYEECIEFENAHQLFDKRSVKD-LGWPSSLTTEGP 202

Query: 253 CNEINEGV-RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
            N+  EG+ R+F  MI E + P   T  +L+     +  +QL K +H   + +     L 
Sbjct: 203 QNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLL 262

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           +  A++ +Y K R +  AR LFD M  KD ++WN +I+AYA+     +  ELF  M  S 
Sbjct: 263 VNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSG 322

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           +R +  T + ++S   +   ++ GK  H +I + G +  V +  +L+DMY +C  ++ A 
Sbjct: 323 IRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSAC 382

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
           ++F+    + +  W+AM+ GY  +G    AL  F  M+  G++ + +  I +L A  H G
Sbjct: 383 KIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIG 442

Query: 492 LVTEGKSVFD-KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL-RPNMIVWG 549
            +   K +    M  GL  +P +     ++    + G ++ A  + +   +   ++I+W 
Sbjct: 443 ALENVKYLHGYSMKLGLTSLPSLN--TALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWN 500

Query: 550 ALLAASKLH 558
           ++++A   H
Sbjct: 501 SMISAHANH 509



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 130/290 (44%), Gaps = 13/290 (4%)

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T+  L   C  +  LQ    +HA  + +GF  +  +++ L+D Y     +  +  +F  +
Sbjct: 29  TLSLLFSRCNSIQHLQ---QIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSV 85

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
              ++ ++NA++    +    ++   ++  M    + P+E T   +L  C+    +  G+
Sbjct: 86  IDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGR 145

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H Y+ K G ++  ++ TAL +MY +C +   A++LF +   +D+   +++      + 
Sbjct: 146 TIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQND 205

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH- 515
            GE     F  M    + P+  TF  LL     AGL         K+VH + +V K+   
Sbjct: 206 NGEGIFRVFGRMIAEQLVPDSFTFFNLLRFI--AGL---NSIQLAKIVHCIAIVSKLSGD 260

Query: 516 ---YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
                 ++ L  +   L +A ++   MP + + +VW  ++AA      P+
Sbjct: 261 LLVNTAVLSLYSKLRSLVDARKLFDKMPEK-DRVVWNIMIAAYAREGKPT 309


>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Vitis vinifera]
          Length = 729

 Score =  367 bits (942), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 219/649 (33%), Positives = 334/649 (51%), Gaps = 79/649 (12%)

Query: 9   NLEQTRQCHAHIIKT---HFKFSYTNIINPLTR----------------------YNSLV 43
           N    RQ HA II     H  +    +IN  TR                      + S++
Sbjct: 13  NFNHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSML 72

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD 103
             Y      +  + +Y  M+  G   D F  P ++K+         G   H   +K G  
Sbjct: 73  RFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSAGTG-----GIGFHAHVLKLGHG 127

Query: 104 GDAYVSNALIQMYSECGSLVSARYLFDEMPN--RDVVSWSTMIRGYHRGGLPEEALEVMR 161
            DA+V NA+I MY+  G +  AR +FDE+P+  R V  W+ M+ GY +     +A     
Sbjct: 128 SDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQA----- 182

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
                D+ P                             RN       V   TA++  Y+K
Sbjct: 183 -QWLFDVMPE----------------------------RN-------VITWTAMVTGYAK 206

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
             +L  A++ F+ + + SVVSW  M+SGY +     E +RLF EM+   + P E T +++
Sbjct: 207 VKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTV 266

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           I  C   G   L   L   + +   + +  +  AL+DMY K  ++ SAR LF+ M  ++V
Sbjct: 267 ISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNV 326

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           + WN++I+ YAQ      A ELF  M    K+ P+EVTMV ++S C   GALE+G W+  
Sbjct: 327 VTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVR 386

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
           ++ +  +++ +    A++ MY++CG +  A R+F E   RD+  +N +++G+  HG G E
Sbjct: 387 FLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVE 446

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           A+     M+  G++P+ +TFIG+L ACSHAGL+ EG+ VF+ +       P I+HY CMV
Sbjct: 447 AINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKD-----PAIDHYACMV 501

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYG 580
           DLLGR G L++A   ++ MP+ P+  V+G+LL AS++HK   +GE+AA ++ E+EP N G
Sbjct: 502 DLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKLFELEPDNSG 561

Query: 581 YNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
             +L+SNIYA A RW DV  +R  MK+  VKK  G+S VE  G +HKFI
Sbjct: 562 NFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWVEYGGKLHKFI 610



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 100/454 (22%), Positives = 195/454 (42%), Gaps = 83/454 (18%)

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNC-KDEKLGVAIATALIDMYSKCGNLA----YAK 229
           M+ + S+ + V + +  + +HA ++ N        VA+      + + C  L     Y  
Sbjct: 1   MLELGSIASRVGNFNHLRQLHAQIIHNSLHHHNYWVAL------LINHCTRLRAPPHYTH 54

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
            LFN     +V  +T M+  Y    +  + V ++ +M    V P    +  ++I+    G
Sbjct: 55  LLFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAF-VYPILIKSAGTG 113

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART------------------ 331
           G+      HA++L+ G      + NA++DMY +   I  AR                   
Sbjct: 114 GIGF----HAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAM 169

Query: 332 ---------------LFDGMKSKDVMIWNAVISAYAQAH----------CI--------- 357
                          LFD M  ++V+ W A+++ YA+            C+         
Sbjct: 170 VSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWN 229

Query: 358 ------------DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
                       ++A  LF  M  + + P+E T V ++S C+  G   +   L   + ++
Sbjct: 230 AMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQK 289

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
            ++++  ++TAL+DMYAK GD++ A +LF+    R++  WN+M+AGY  +G    A+  F
Sbjct: 290 RIQLNCFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELF 349

Query: 466 VDM-ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLG 524
            +M     + P+ +T + +++AC H G +  G  V   +     +   I  +  M+ +  
Sbjct: 350 KEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTEN-QIKLSISGHNAMIFMYS 408

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           R G +++A  + + M  R +++ +  L++    H
Sbjct: 409 RCGSMEDAKRVFQEMATR-DVVSYNTLISGFAAH 441


>gi|255561305|ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539054|gb|EEF40650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 578

 Score =  367 bits (941), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 185/566 (32%), Positives = 332/566 (58%), Gaps = 2/566 (0%)

Query: 56  LNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQM 115
           L  Y  +  +    + + IP+++KAC+     H G +++   +K+GLD D  + N+ I  
Sbjct: 11  LKFYKELHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDFVICNSFISF 70

Query: 116 YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAM 175
           Y++     SA  +FD MP +D +SW+ +I GY + G   +   + +EM    I P    +
Sbjct: 71  YAKSSCTESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVPKPELV 130

Query: 176 ISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL 235
            S+VS+   + D+ LG+AIHA V+ + +  K  + + T+L+D Y K G+   A ++F+++
Sbjct: 131 ASVVSVCVRLGDMKLGRAIHALVLIDGRIAK-EIFVLTSLVDWYFKSGDSLMALRVFDQI 189

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
              +VVSWT ++SG     + N  +  F  M    V P+ +T+++++     +G  + GK
Sbjct: 190 EVKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPAFAELGCAKTGK 249

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCRE-IRSARTLFDGMKSKDVMIWNAVISAYAQA 354
            +H Y  R+GF+      ++L+ +Y + RE ++ A+  F+    KDV++W+++I +Y ++
Sbjct: 250 EIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQLAKLTFERSNVKDVVMWSSIIGSYCRS 309

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
               +A +LF  M+     PN VT++ +++ CT   +L+ G   H YI K GL  D  + 
Sbjct: 310 ADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGYIVKCGLNFDTYIG 369

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
            AL++MY+KCG V  ++++F E   +D   W+ ++  YG+HG G+EAL  F +M+  GV+
Sbjct: 370 NALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLITAYGLHGHGKEALCLFHEMQLQGVE 429

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
           P+ +TF+ +L+AC+H+GLV EG+ +FD +     +   +EHY C+VDLLG++G +D+A +
Sbjct: 430 PDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDGKVSLTVEHYACLVDLLGKSGKVDDAFD 489

Query: 535 MIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANR 594
           ++++MP++P+  +W +L++A K+H    + E  A ++++ EP N   + L+S IYA +  
Sbjct: 490 ILRAMPMKPSTTIWSSLVSACKIHGRLEIAERLAQELIKSEPSNAANHTLLSMIYAESGN 549

Query: 595 WNDVAGVRRVMKEIRVKKEPGFSSVE 620
           W  V  VRR+M+   + K  GFS V 
Sbjct: 550 WFAVEDVRRLMRVQGLSKCYGFSQVS 575



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 227/458 (49%), Gaps = 10/458 (2%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFM 62
           I N F++      C    +K    F    + +P++ +N ++  Y +N   +    ++  M
Sbjct: 63  ICNSFISFYAKSSCTESALKV---FDTMPLKDPIS-WNCIINGYFQNGYFTQGFIMFKEM 118

Query: 63  RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG-LDGDAYVSNALIQMYSECGS 121
            + G       + +++  C ++    LG+ IH   + +G +  + +V  +L+  Y + G 
Sbjct: 119 YECGIVPKPELVASVVSVCVRLGDMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGD 178

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
            + A  +FD++  ++VVSW+ ++ G         AL+  R M+   +RP+ V +I+++  
Sbjct: 179 SLMALRVFDQIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPA 238

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN-LAYAKQLFNRLNQNSV 240
           FA++     GK IH    R+  D  L     ++LI +Y +    L  AK  F R N   V
Sbjct: 239 FAELGCAKTGKEIHGYAFRHGFD--LDHHFLSSLIHIYCRSREGLQLAKLTFERSNVKDV 296

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           V W+ +I  Y R  +  E ++LF  M  +   P+ +T+L++I  C  +  L+ G   H Y
Sbjct: 297 VMWSSIIGSYCRSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYGTHGY 356

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           I++ G  F   + NAL++MY KC  + ++  +F  M  KD + W+ +I+AY       +A
Sbjct: 357 IVKCGLNFDTYIGNALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLITAYGLHGHGKEA 416

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG-LEVDVILKTALVD 419
             LF  M++  V P+ +T + +LS C  +G ++ G+ +   ++K G + + V     LVD
Sbjct: 417 LCLFHEMQLQGVEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDGKVSLTVEHYACLVD 476

Query: 420 MYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMHG 456
           +  K G V+ A+ +  +  +     +W+++++   +HG
Sbjct: 477 LLGKSGKVDDAFDILRAMPMKPSTTIWSSLVSACKIHG 514



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 130/254 (51%), Gaps = 7/254 (2%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  ++S++ SY ++     AL ++ +MR +G+E ++ T+  ++ AC  +     G  
Sbjct: 293 VKDVVMWSSIIGSYCRSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLTSLKNGYG 352

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
            HG+ +K GL+ D Y+ NALI MYS+CG +V++  +F EM  +D VSWST+I  Y   G 
Sbjct: 353 THGYIVKCGLNFDTYIGNALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLITAYGLHGH 412

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            +EAL +  EM+   + P  +  ++++S       V  G+ I   V ++ K   L V   
Sbjct: 413 GKEALCLFHEMQLQGVEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDGK-VSLTVEHY 471

Query: 213 TALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
             L+D+  K G +  A  +   +  + S   W+ ++S       +    RL  E+I+   
Sbjct: 472 ACLVDLLGKSGKVDDAFDILRAMPMKPSTTIWSSLVSACKIHGRLEIAERLAQELIKSE- 530

Query: 272 FPSEI---TILSLI 282
            PS     T+LS+I
Sbjct: 531 -PSNAANHTLLSMI 543


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score =  367 bits (941), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 195/601 (32%), Positives = 343/601 (57%), Gaps = 9/601 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV---DNFTIPTILKACAQVLMTHLGKE 92
           L  ++++++ +  N+  S AL  +  M +    +   + +    +L++C+  L    G  
Sbjct: 107 LVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTGLA 166

Query: 93  IHGFAIKNG-LDGDAYVSNALIQMYSECG-SLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           I  F +K G  D    V  ALI M+++ G  + SAR +FD+M ++++V+W+ MI  Y + 
Sbjct: 167 IFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYSQL 226

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           GL ++A+++   +   +  P +  + S++S   ++    LGK +H+ V+R+       V 
Sbjct: 227 GLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASD--VF 284

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           +   L+DMY+K   +  ++++FN +  ++V+SWT +ISGY++  +  E ++LF  M+  +
Sbjct: 285 VGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGH 344

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           V P+  T  S++  C  +    +GK LH   ++ G      + N+L++MY +   +  AR
Sbjct: 345 VTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVGNSLINMYARSGTMECAR 404

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
             F+ +  K+++ +N    A A+A   D++F     ++ + V  +  T   LLS     G
Sbjct: 405 KAFNILFEKNLISYNTAADANAKALDSDESFNH--EVEHTGVGASPFTYACLLSGAACIG 462

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
            +  G+ +H  I K G   ++ +  AL+ MY+KCG+   A ++F++  YR++  W ++++
Sbjct: 463 TIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIIS 522

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           G+  HG   +AL  F +M   GVKPN +T+I +L+ACSH GL+ E    F+ M +   + 
Sbjct: 523 GFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSHVGLIDEAWKHFNSMHYNHSIS 582

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           P++EHY CMVDLLGR+GLL EA E I SMP   + +VW   L + ++H+N  +GE AA +
Sbjct: 583 PRMEHYACMVDLLGRSGLLLEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKK 642

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIR 630
           ILE EP +    +L+SN+YA   RW+DVA +R+ MK+ ++ KE G+S +EV+  VHKF  
Sbjct: 643 ILEREPHDPATYILLSNLYASEGRWDDVAALRKSMKQKKLIKETGYSWIEVDNQVHKFHV 702

Query: 631 G 631
           G
Sbjct: 703 G 703



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 145/539 (26%), Positives = 262/539 (48%), Gaps = 19/539 (3%)

Query: 62  MRKNGSEVD-NFTIPTI-----LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQM 115
           +RK  S +D   T P I     LKAC +     LGK +H   I +GL  D+ + N+LI +
Sbjct: 24  LRKAISRLDLTTTSPLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITL 83

Query: 116 YSECGSLVSARYLFDEMPN--RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD---IRP 170
           YS+CG   +A  +F  M +  RD+VSWS +I  +    +   AL     M       I P
Sbjct: 84  YSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYP 143

Query: 171 SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCG-NLAYAK 229
           +E    +++   ++      G AI A +++    +   V +  ALIDM++K G ++  A+
Sbjct: 144 NEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDS-HVCVGCALIDMFTKGGLDIQSAR 202

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
            +F+++   ++V+WT+MI+ Y +   +++ V LF  ++     P + T+ SL+  C  + 
Sbjct: 203 MVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELE 262

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
              LGK LH++++R+G    + +   LVDMY K   + ++R +F+ M   +VM W A+IS
Sbjct: 263 FFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALIS 322

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
            Y Q+    +A +LF +M    V PN  T   +L  C       +GK LH    K GL  
Sbjct: 323 GYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLST 382

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
              +  +L++MYA+ G +  A + F+    +++  +N            +E+  F  ++E
Sbjct: 383 INCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDES--FNHEVE 440

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
            +GV  +  T+  LL+  +  G + +G+ +   +V   G    +     ++ +  + G  
Sbjct: 441 HTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKS-GFGTNLCINNALISMYSKCGNK 499

Query: 530 DEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI--EPQNYGYNVLMS 586
           + A ++   M  R N+I W ++++    H   +       ++LEI  +P    Y  ++S
Sbjct: 500 EAALQVFNDMGYR-NVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLS 557


>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 780

 Score =  367 bits (941), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 191/582 (32%), Positives = 330/582 (56%), Gaps = 4/582 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSLV++++ N     A      M ++G  ++  ++ +++ AC        G  IH  A+
Sbjct: 188 WNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAV 247

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+    ++NAL+ MY + G + ++  +FD M  ++ VSW++ I  +   G   + L 
Sbjct: 248 KVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLR 307

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R+M   ++ P  + + S++    ++   DLG+ +H   ++   D  L + +A +L+DM
Sbjct: 308 MFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMD--LDIFVANSLVDM 365

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G+L  A  +F ++   +VVSW  MI+  ++     E  RL  +M +    P+ IT+
Sbjct: 366 YAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITL 425

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           ++++  C  +  L++GK +HA+ +R G  F L ++NAL+DMY KC ++  AR +F+  + 
Sbjct: 426 VNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFERSEK 485

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            DV  +N +I  Y+Q+    ++  LF  M+   +  + V+ +G LS CT     + GK +
Sbjct: 486 DDVS-YNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEI 544

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + ++ L     L  +L+D+Y K G +  A ++F++   +D+  WN M+ GYGMHG  
Sbjct: 545 HCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKKDVASWNTMILGYGMHGQI 604

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           + A   F  M+  G+  + +++I +L ACSH GLV +GK  F +MV    + P+  HY C
Sbjct: 605 DIAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMV-AQNIEPQQMHYAC 663

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLLGRAG L +  E+I+ MP   N  VWGALL A ++H N  + + AA  + E++P++
Sbjct: 664 MVDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEH 723

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
            GY  LM N+YA   RWN+   +R++MK  +V+K P +S V+
Sbjct: 724 SGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWVQ 765



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 150/509 (29%), Positives = 262/509 (51%), Gaps = 7/509 (1%)

Query: 52  PSSALNIYAFMRKNGSEVDNFTIP--TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVS 109
           PS AL +Y  M ++    D+ T P      A A       G E+H  A++ G   D +  
Sbjct: 98  PSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFTG 157

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
           N L+  Y+ CG    AR +FDEMP RDVVSW++++  +   G+  +A   +  M      
Sbjct: 158 NTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFP 217

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
            +  +++S+V       +   G +IHA  V+   +    V +A AL+DMY K G++  + 
Sbjct: 218 LNVASLVSVVPACGTEQEEKFGLSIHALAVKVGLNTM--VNLANALVDMYGKFGDVEASM 275

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           Q+F+ + + + VSW   I  ++      + +R+F +M E NV P  IT+ SL+     +G
Sbjct: 276 QVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELG 335

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
              LG+ +H Y ++   +  + +AN+LVDMY K   +  A T+F+ MK ++V+ WNA+I+
Sbjct: 336 SFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIA 395

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
              Q     +AF L   M+ S   PN +T+V +L  C    +L+MGK +H +  ++GL  
Sbjct: 396 NLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMF 455

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           D+ +  AL+DMY+KCG ++ A  +F  +   D+  +N ++ GY       E+L+ F  M 
Sbjct: 456 DLFISNALIDMYSKCGQLSLARNIFERSEKDDVS-YNTLILGYSQSPWCFESLLLFKQMR 514

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
             G+  + ++F+G L+AC++  +   GK +   +V  L L         ++DL  + G+L
Sbjct: 515 SVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRL-LSGHPFLSNSLLDLYTKGGML 573

Query: 530 DEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             A ++   +  + ++  W  ++    +H
Sbjct: 574 VTASKIFNKIT-KKDVASWNTMILGYGMH 601



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 209/435 (48%), Gaps = 9/435 (2%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNR--DVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
           ++ AL+  Y+    L SAR +    P R      W+++ R      LP EAL V   M  
Sbjct: 51  LAGALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRALSSASLPSEALRVYNLMLR 110

Query: 166 MDIRPSE--VAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCG 223
             +RP +         +  A  +  D G  +HA  +R  +     V     L+  Y+ CG
Sbjct: 111 SAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALR--RGHLADVFTGNTLVAFYAACG 168

Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI-TILSLI 282
               A+++F+ + +  VVSW  ++S ++     ++  R    M+    FP  + +++S++
Sbjct: 169 KACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSG-FPLNVASLVSVV 227

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
             CG     + G  +HA  ++ G    + +ANALVDMYGK  ++ ++  +FDGM  ++ +
Sbjct: 228 PACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNEV 287

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
            WN+ I  +  A        +F  M    V P  +T+  LL    E G+ ++G+ +H Y 
Sbjct: 288 SWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYS 347

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
            K+ +++D+ +  +LVDMYAK G +  A  +F +   R++  WNAM+A    +G   EA 
Sbjct: 348 IKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAF 407

Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDL 522
               DM++SG  PN IT + +L AC+    +  GK +    +   GL+  +     ++D+
Sbjct: 408 RLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRR-GLMFDLFISNALIDM 466

Query: 523 LGRAGLLDEAHEMIK 537
             + G L  A  + +
Sbjct: 467 YSKCGQLSLARNIFE 481



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 14/260 (5%)

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLF--DGMKSKDVMIWNAVISAYAQAHC 356
           A ++      SL +A AL+  Y    ++ SAR +     ++ +   +WN++  A + A  
Sbjct: 38  ASLVSGALATSLPLAGALLLSYAALSDLASARLVLRHHPLRLRSAFLWNSLSRALSSASL 97

Query: 357 IDKAFELFIHMKVSKVRPNEVT--MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
             +A  ++  M  S VRP++ T       +    A A + G  LH    ++G   DV   
Sbjct: 98  PSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFTG 157

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
             LV  YA CG    A R+F E   RD+  WN++++ + ++G   +A    V M RSG  
Sbjct: 158 NTLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFP 217

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLD 530
            N  + + ++ AC      TE +  F   +H L    GL   +     +VD+ G+ G ++
Sbjct: 218 LNVASLVSVVPACG-----TEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVE 272

Query: 531 EAHEMIKSMPLRPNMIVWGA 550
            + ++   M L  N + W +
Sbjct: 273 ASMQVFDGM-LEQNEVSWNS 291


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  367 bits (941), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 197/603 (32%), Positives = 341/603 (56%), Gaps = 16/603 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + SL+  Y  N        ++  M+  G   + +T+ T++ A     +  +G ++H   +
Sbjct: 162 WTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVV 221

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G +    V N+LI +YS  G L  AR +FD+M  RD V+W++MI GY R G   E  E
Sbjct: 222 KHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFE 281

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATA 214
           +  +M+   ++P+ +   S++   A + ++ L K +       CK  K G      + TA
Sbjct: 282 IFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQ------CKALKSGFTTDQIVITA 335

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQ-NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           L+   SKC  +  A  LF+ + +  +VVSWT MISG ++    ++ V LF++M  E V P
Sbjct: 336 LMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKP 395

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +  T  +++     V        +HA +++  +E S ++  AL+D Y K      A  +F
Sbjct: 396 NHFTYSAILT----VHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVF 451

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC-TEAGAL 392
           + +++KD+M W+A+++ YAQ    ++A +LF  +    ++PNE T   +++ C +   A 
Sbjct: 452 EIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAA 511

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           E GK  H Y  K  L   + + +ALV MYAK G+++ A+ +F     RD+  WN+M++GY
Sbjct: 512 EQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGY 571

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             HG  ++AL  F +M++  +  + +TFIG++ AC+HAGLV +G+  F+ M++   + P 
Sbjct: 572 SQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPT 631

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           ++HY CM+DL  RAG+L++A  +I  MP  P   VW  LL A+++H+N  +GE+AA +++
Sbjct: 632 MKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLI 691

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
            ++P++    VL+SN+YA A  W +   VR++M + +VKKEPG+S +EV    + F+ G 
Sbjct: 692 SLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGD 751

Query: 633 MVN 635
           + +
Sbjct: 752 LTH 754



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 152/528 (28%), Positives = 266/528 (50%), Gaps = 16/528 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N L+ SY ++ +   ALN++  +  +  + D  T+  +   CA  L   LG+++H 
Sbjct: 58  LKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGRQVHC 117

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K GL     V  +L+ MY +  ++   R +FDEM  R+VVSW++++ GY   GL   
Sbjct: 118 QCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGY 177

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
             E+  +M++  + P+   + ++++   +   V +G  +HA VV++  +E   + +  +L
Sbjct: 178 VWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEE--AIPVFNSL 235

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I +YS+ G L  A+ +F+++     V+W  MI+GY+R  +  E   +F +M    V P+ 
Sbjct: 236 ISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTH 295

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T  S+I  C  +  L L K +    L++GF     +  AL+    KC+E+  A +LF  
Sbjct: 296 MTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSL 355

Query: 336 MKS-KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
           M+  K+V+ W A+IS   Q    D+A  LF  M+   V+PN  T   +L++       EM
Sbjct: 356 MEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEM 415

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
               H  + K   E    + TAL+D Y K G+   A ++F     +D+  W+AM+AGY  
Sbjct: 416 ----HAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQ 471

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
            G  EEA   F  + + G+KPN  TF  ++NAC+      E    F    H   +  ++ 
Sbjct: 472 TGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQF----HAYAIKMRLN 527

Query: 515 HYGC----MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +  C    +V +  + G +D AHE+ K    R +++ W ++++    H
Sbjct: 528 NALCVSSALVTMYAKRGNIDSAHEVFKRQKER-DLVSWNSMISGYSQH 574



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 172/368 (46%), Gaps = 5/368 (1%)

Query: 228 AKQLFNRLNQ--NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
           A  LF+++     ++     ++  Y R  +  E + LF  ++  ++ P E T+  +   C
Sbjct: 44  AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
                 +LG+ +H   ++ G    +++  +LVDMY K   +   R +FD M  ++V+ W 
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
           ++++ Y+        +ELF  M+   V PN  T+  +++     G + +G  +H  + K 
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKH 223

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
           G E  + +  +L+ +Y++ G +  A  +F +   RD   WN+M+AGY  +G   E    F
Sbjct: 224 GFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIF 283

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
             M+ +GVKP  +TF  ++ +C+    +   K +  K +       +I     MV  L +
Sbjct: 284 NKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMV-ALSK 342

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNV 583
              +D+A  +   M    N++ W A+++    +          +Q+    ++P ++ Y+ 
Sbjct: 343 CKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSA 402

Query: 584 LMSNIYAV 591
           +++  Y V
Sbjct: 403 ILTVHYPV 410



 Score = 43.9 bits (102), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 20/155 (12%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NS+++ Y ++ +   AL ++  M+K   +VD  T   ++ AC     TH G    G
Sbjct: 561 LVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITAC-----THAGLVEKG 615

Query: 96  FAIKNGLDGDAYVS------NALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMI---R 145
               N +  D +++      + +I +YS  G L  A  + +EMP       W T++   R
Sbjct: 616 QKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAAR 675

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
            +    L E A E     + + ++P + A   ++S
Sbjct: 676 VHRNVELGELAAE-----KLISLQPEDSAAYVLLS 705


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 196/540 (36%), Positives = 301/540 (55%), Gaps = 3/540 (0%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G  +HG+ +K G      V NALI  Y++   +  A  +FDEMP RD++SW+++I G   
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
            GL ++A+E+   M           ++S++          +G  +H   VR     +   
Sbjct: 63  NGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISE--T 120

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
           ++  AL+DMYS C +     ++F  + Q +VVSWT MI+ Y R    ++   LF EM  E
Sbjct: 121 SLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLE 180

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            + P    I S +        L+ GK +H Y +RNG E  L +ANAL++MY KC  +  A
Sbjct: 181 GIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEA 240

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           R +FD +  KD + WN +I  Y++++  ++AF LF  M + ++RPN VTM  +L      
Sbjct: 241 RFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLL-QLRPNAVTMACILPAAASL 299

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            +LE G+ +H Y  ++G   D  +  ALVDMY KCG +  A RLF     +++  W  M+
Sbjct: 300 SSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMI 359

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           AGYGMHG G +A+  F  M+ SG++P+  +F  +L ACSH+GL  EG   F+ M +   +
Sbjct: 360 AGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRI 419

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            PK++HY CMVDLL   G L EA+E I++MP+ P+  +W +LL   ++H+N  + E  A 
Sbjct: 420 EPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAE 479

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            + E+EP+N GY VL++NIYA A RW  V  ++  +    +++  G S +EV G  H F 
Sbjct: 480 MVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKAHIFF 539



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 219/419 (52%), Gaps = 5/419 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++     N     A+ ++  M   G E+D+ T+ +++ AC Q   + +G  +HG+++
Sbjct: 53  WNSIIGGCASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSV 112

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + GL  +  + NAL+ MYS C    S   +F  M  ++VVSW+ MI  Y R G  ++   
Sbjct: 113 RTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAG 172

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + +EM    IRP   A+ S +  FA    +  GK++H   +RN  +E L   +A AL++M
Sbjct: 173 LFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVL--PVANALMEM 230

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCG +  A+ +F+ + +   +SW  +I GY R N  NE   LF EM+ + + P+ +T+
Sbjct: 231 YVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTM 289

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
             ++     +  L+ G+ +HAY +R G+     +ANALVDMY KC  +  AR LFD + +
Sbjct: 290 ACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTN 349

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KW 397
           K+++ W  +I+ Y        A  LF  MK S ++P+  +   +L  C+ +G  + G ++
Sbjct: 350 KNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRF 409

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
            +    +  +E  +     +VD+    G++  AY       I  D  +W +++ G  +H
Sbjct: 410 FNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIH 468


>gi|413918945|gb|AFW58877.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 768

 Score =  367 bits (941), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 201/599 (33%), Positives = 341/599 (56%), Gaps = 6/599 (1%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           NP++ + +++ ++ +N++ + A+ +++ M + G+  D F + + ++ACA++    LG+++
Sbjct: 110 NPVS-WAAVIAAHAQNSRCADAMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQV 168

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           H  AIK+   G   V NAL+ MYS+ GS+     LF+ + ++D+ SW ++I G  + G  
Sbjct: 169 HAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGRE 228

Query: 154 EEALEVMREMRFMDIR-PSEVAMISMVSLFADVAD-VDLGKAIHACVVRNCKDEKLGVAI 211
            +AL + REM    +  P+E    S+    + V + ++ G+ IH   V+   D       
Sbjct: 229 MDALHIFREMIAEGMHHPNEFHFGSVFRACSVVINSLEYGEQIHGLCVKYKLDRN--SYA 286

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
             +L DMY++C  L  A ++F R+    +VSW  +I+ +     ++E + LF+EM   ++
Sbjct: 287 GCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSLINAFSADGLLSEAMVLFSEMRYSSL 346

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P  IT+++L+  C     L+ G+ +H+Y+++ G    + + N+L+ MY +C +  SA  
Sbjct: 347 KPDGITVMALLCACVGCDALRQGRSIHSYLVKLGLGGDVMVCNSLISMYTRCLDFPSAMD 406

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +F     +DV+ WN++++A  Q   ++  F+LF  +  S    + +++  +LS   E G 
Sbjct: 407 VFHETNDRDVVTWNSILTACVQHRHMEDVFKLFRLLHSSMPSLDRISLNNVLSASAELGY 466

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS-EAIYRDICMWNAMMA 450
            EM K +H Y  K GL  D IL  AL+D YAKCG ++ A +LF      RD+  W++++ 
Sbjct: 467 FEMAKQVHAYAFKVGLVSDAILSNALIDTYAKCGSLDDANKLFEIMGTGRDVFSWSSLIV 526

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           GY   G  +EAL  F  M   GVKPN +TF+G+L ACS  GLV EG   +  M    G+V
Sbjct: 527 GYAQFGYAKEALDLFARMRNLGVKPNHVTFVGVLIACSRVGLVDEGCYYYSIMEPEYGIV 586

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           P  EH  C++DLL RAG L EA + +  MP  P++I+W  LLAAS+ H +  MG+ AA  
Sbjct: 587 PTKEHCSCVIDLLARAGRLSEAAKFVDQMPFEPDIIMWNTLLAASRTHNDVEMGKRAAEG 646

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +L I+P +    VL+ NIYA +  WN+ A +++ M+   V+K PG S +++ G +  FI
Sbjct: 647 VLNIDPSHSAAYVLLCNIYASSGNWNEFARLKKDMRSSGVQKSPGKSWIKLKGELKVFI 705



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 228/447 (51%), Gaps = 5/447 (1%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           +SN LI MY  C +  SAR +FD M +R+ VSW+ +I  + +     +A+ +   M  + 
Sbjct: 82  LSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRLG 141

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
             P E A+ S V   A++ D+ LG+ +HA  +++  D    + +  AL+ MYSK G++  
Sbjct: 142 TAPDEFALGSAVRACAELGDLGLGRQVHAQAIKS--DNGGHLIVQNALVTMYSKSGSVGD 199

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV-FPSEITILSLIIECG 286
              LF R+    + SW  +I+G  +     + + +F EMI E +  P+E    S+   C 
Sbjct: 200 GFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACS 259

Query: 287 FV-GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
            V   L+ G+ +H   ++   + +     +L DMY +C ++ SA  +F  ++S D++ WN
Sbjct: 260 VVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWN 319

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
           ++I+A++    + +A  LF  M+ S ++P+ +T++ LL  C    AL  G+ +H+Y+ K 
Sbjct: 320 SLINAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVKL 379

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
           GL  DV++  +L+ MY +C D   A  +F E   RD+  WN+++     H   E+    F
Sbjct: 380 GLGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDRDVVTWNSILTACVQHRHMEDVFKLF 439

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
             +  S    + I+   +L+A +  G     K V       +GLV        ++D   +
Sbjct: 440 RLLHSSMPSLDRISLNNVLSASAELGYFEMAKQVH-AYAFKVGLVSDAILSNALIDTYAK 498

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALL 552
            G LD+A+++ + M    ++  W +L+
Sbjct: 499 CGSLDDANKLFEIMGTGRDVFSWSSLI 525



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 185/399 (46%), Gaps = 20/399 (5%)

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           ++  LI MY +C     A+ +F+ +   + VSW  +I+ + + +   + + LF+ M+   
Sbjct: 82  LSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCADAMGLFSSMLRLG 141

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
             P E  + S +  C  +G L LG+ +HA  +++     L + NALV MY K   +    
Sbjct: 142 TAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNALVTMYSKSGSVGDGF 201

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV-RPNEVTMVGLLSLCTEA 389
            LF+ ++ KD+  W ++I+  AQ      A  +F  M    +  PNE     +   C+  
Sbjct: 202 ALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPNEFHFGSVFRACSVV 261

Query: 390 -GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
             +LE G+ +H    K  L+ +     +L DMYA+C  ++ A ++F      D+  WN++
Sbjct: 262 INSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSAMKVFYRIESPDLVSWNSL 321

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +  +   G   EA++ F +M  S +KP+GIT + LL AC     + +G+S+   +V  LG
Sbjct: 322 INAFSADGLLSEAMVLFSEMRYSSLKPDGITVMALLCACVGCDALRQGRSIHSYLVK-LG 380

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN-------- 560
           L   +     ++ +  R      A ++      R +++ W ++L A   H++        
Sbjct: 381 LGGDVMVCNSLISMYTRCLDFPSAMDVFHETNDR-DVVTWNSILTACVQHRHMEDVFKLF 439

Query: 561 -------PSMGEIAATQILEIEPQNYGYNVLMSNIYAVA 592
                  PS+  I+   +L    +  GY  +   ++A A
Sbjct: 440 RLLHSSMPSLDRISLNNVLSASAE-LGYFEMAKQVHAYA 477



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 131/262 (50%), Gaps = 17/262 (6%)

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ-AHCI 357
           AY+ RN       ++N L+ MYG+C    SAR +FDGM  ++ + W AVI+A+AQ + C 
Sbjct: 74  AYLARNTI-----LSNHLITMYGRCAAPDSARMVFDGMLDRNPVSWAAVIAAHAQNSRCA 128

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
           D A  LF  M      P+E  +   +  C E G L +G+ +H    K      +I++ AL
Sbjct: 129 D-AMGLFSSMLRLGTAPDEFALGSAVRACAELGDLGLGRQVHAQAIKSDNGGHLIVQNAL 187

Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV-KPN 476
           V MY+K G V   + LF     +D+  W +++AG    G   +AL  F +M   G+  PN
Sbjct: 188 VTMYSKSGSVGDGFALFERIRDKDLFSWGSIIAGLAQQGREMDALHIFREMIAEGMHHPN 247

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE---HYGCMV-DLLGRAGLLDEA 532
              F  +  ACS    V      + + +HGL +  K++   + GC + D+  R   LD A
Sbjct: 248 EFHFGSVFRACS----VVINSLEYGEQIHGLCVKYKLDRNSYAGCSLGDMYARCNKLDSA 303

Query: 533 HEMIKSMPLRPNMIVWGALLAA 554
            ++   +   P+++ W +L+ A
Sbjct: 304 MKVFYRIE-SPDLVSWNSLINA 324


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  366 bits (940), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 199/560 (35%), Positives = 321/560 (57%), Gaps = 26/560 (4%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
            + +HG ++  G   D +V++AL ++Y +      AR +FD +P+ D + W+T++     
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLL----- 187

Query: 150 GGLP-EEALEVMREMRFMD---IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
            GLP  EALE    +R +D   +RP    + S +   A+ + + +G+ +H   V      
Sbjct: 188 AGLPGSEALEAF--VRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGV------ 239

Query: 206 KLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVR 261
           K G+A    + T L+ +YSKCG++  A+ LF+R++   +V++  +ISGY     +   V 
Sbjct: 240 KCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVE 299

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           LF E+      P+  T++++I      G   L + LHA++++   +    ++ AL  +Y 
Sbjct: 300 LFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYC 359

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           +  ++ SAR++FD M  K +  WNA+IS YAQ    + A  LF  M+   V+PN +T+  
Sbjct: 360 RLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISS 419

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
            LS C   GAL +GKW+H  I K+ LE++V + TAL+DMYAKCG +  A  +F     ++
Sbjct: 420 TLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKN 479

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           +  WNAM++GYG+HG G EAL  + DM  + + P   TF+ ++ ACSH GLV EG+ VF 
Sbjct: 480 VVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFR 539

Query: 502 KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP---LRPNMIVWGALLAASKLH 558
            M +   + P IEH  CMVDLLGRAG L+EA E+I   P   + P   VWGALL A  +H
Sbjct: 540 VMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPG--VWGALLGACMVH 597

Query: 559 KNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSS 618
           KN  + ++A+ ++ E++ +N GY VL+SN+Y     +++ A VR+  K  ++ K PG + 
Sbjct: 598 KNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTL 657

Query: 619 VEVNGLVHKFIRGGMVNWKS 638
           +E+    H F+ G  ++ +S
Sbjct: 658 IEIGDRPHVFMAGDHLHPQS 677



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 226/429 (52%), Gaps = 11/429 (2%)

Query: 53  SSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNA 111
           S AL  +  M   G    D+ T+ + L+A A+     +G+ +HG+ +K GL    +V   
Sbjct: 193 SEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTG 252

Query: 112 LIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPS 171
           L+ +YS+CG + SA++LFD M N D+V+++ +I GY   G+ E ++E+ +E+     RP+
Sbjct: 253 LMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPN 312

Query: 172 EVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQL 231
              +++++ +++      L + +HA VV+   D      ++TAL  +Y +  ++  A+ +
Sbjct: 313 SSTLVAVIPVYSPFGHELLARCLHAFVVKARLDAD--ALVSTALTTLYCRLNDMESARSI 370

Query: 232 FNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL 291
           F+ + + ++ SW  MISGY +       V LF  M E NV P+ ITI S +  C  +G L
Sbjct: 371 FDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGAL 430

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
            LGKW+H  I +   E ++ +  AL+DMY KC  I  AR++FD M +K+V+ WNA+IS Y
Sbjct: 431 SLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGY 490

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVD 410
                  +A +L+  M  +++ P   T + ++  C+  G ++ G K       +  +   
Sbjct: 491 GLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPG 550

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDI--CMWNAMMAGYGMHGCGEEA-----LI 463
           +   T +VD+  + G +N A  L SE     I   +W A++    +H   + A      +
Sbjct: 551 IEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLASQKL 610

Query: 464 FFVDMERSG 472
           F +D E +G
Sbjct: 611 FELDSENAG 619



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 178/333 (53%), Gaps = 14/333 (4%)

Query: 26  KFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV 84
           +F +  + NP L  YN+L++ Y  N    S++ ++  +  +G   ++ T+  ++   +  
Sbjct: 267 QFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPF 326

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
               L + +H F +K  LD DA VS AL  +Y     + SAR +FD M  + + SW+ MI
Sbjct: 327 GHELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMI 386

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
            GY + GL E A+ + + M+ ++++P+ + + S +S  A +  + LGK +H  + +  + 
Sbjct: 387 SGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISK--EK 444

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
            +L V + TALIDMY+KCG++A A+ +F+R++  +VVSW  MISGY    +  E ++L+ 
Sbjct: 445 LELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGQGAEALKLYK 504

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWL-----HAYILRNGFEFSLAMANALVDM 319
           +M++  + P+  T LS+I  C   G +  G+ +     + Y +  G E    M    VD+
Sbjct: 505 DMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHCTCM----VDL 560

Query: 320 YGKCREIRSARTLFDGMKSKDV--MIWNAVISA 350
            G+  ++  A  L        +   +W A++ A
Sbjct: 561 LGRAGKLNEALELISEFPQSAIGPGVWGALLGA 593


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  366 bits (939), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 200/595 (33%), Positives = 324/595 (54%), Gaps = 4/595 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++++++KN++ S A+ ++  M  +G   + F    ++ AC        G+++H   +
Sbjct: 170 WNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVV 229

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G D D + +NAL+ MYS+ G +  A  +F ++P  DVVSW+  I G    G  + ALE
Sbjct: 230 RTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALE 289

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLG--KAIHACVVRNCKDEKLGVAIATALI 216
           ++ +M+   + P+   + S++   A          + IH  +++ C D      I  AL+
Sbjct: 290 LLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSD--DYIGVALV 347

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           DMY+K G L  A+++F  + +  ++ W  +ISG        E + LF  M +E    +  
Sbjct: 348 DMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRT 407

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T+ +++     +  +     +HA   + GF     + N L+D Y KC  +R A  +F+  
Sbjct: 408 TLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEH 467

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
            S +++ + ++I+A +Q    + A +LF+ M    + P+   +  LL+ C    A E GK
Sbjct: 468 SSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGK 527

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H ++ K+    DV    ALV  YAKCG +  A   FS    + +  W+AM+ G   HG
Sbjct: 528 QVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHG 587

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
            G+ AL  F  M    + PN IT   +L AC+HAGLV E K  F  M    G+    EHY
Sbjct: 588 HGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHY 647

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            CM+DLLGRAG LD+A E++ SMP   N  VWGALLAAS++H++P +G++AA ++  +EP
Sbjct: 648 SCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLAAEKLFVLEP 707

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +  G +VL++N YA A  W++VA VR++MK+ +VKKEP  S VE+   VH FI G
Sbjct: 708 EKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHTFIVG 762



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 256/523 (48%), Gaps = 10/523 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           ++SLVT+Y  N  P  AL  +  MR  G   + F +P +LK CA      LG ++H  A+
Sbjct: 71  WSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CAP--DAGLGVQVHAVAV 127

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMIRGYHRGGLPEEAL 157
             GL GD +V+NAL+ MY   G +  AR +FDE   +R+ VSW+ M+  + +     +A+
Sbjct: 128 STGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAV 187

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           E+  EM +  +RP+E     +V+      D++ G+ +HA VVR   D+   V  A AL+D
Sbjct: 188 ELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKD--VFTANALVD 245

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYSK G++  A  +F ++ +  VVSW   ISG +        + L  +M    + P+  T
Sbjct: 246 MYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFT 305

Query: 278 ILSLI--IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           + S++        G   LG+ +H ++++   +    +  ALVDMY K   +  AR +F+ 
Sbjct: 306 LSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEW 365

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +  KD+++WNA+IS  +   C  ++  LF  M+      N  T+  +L       A+   
Sbjct: 366 IPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDT 425

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H   EK G   D  +   L+D Y KC  +  A ++F E    +I  + +M+      
Sbjct: 426 TQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQC 485

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
             GE+A+  F++M R G++P+      LLNAC+      +GK V   ++     +  +  
Sbjct: 486 DHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK-RKFMTDVFA 544

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
              +V    + G +++A      +P +  ++ W A++     H
Sbjct: 545 GNALVYTYAKCGSIEDADLAFSGLPDK-GVVSWSAMIGGLAQH 586



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 215/430 (50%), Gaps = 10/430 (2%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           +I  +L   A      LG  IH   +K+GL       N L+  YS+C    SAR +FDE 
Sbjct: 6   SISPLLTRYAATQSLFLGAHIHAHLLKSGLL--HAFRNHLLSFYSKCRLPGSARRVFDET 63

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           P+   VSWS+++  Y    LP EAL   R MR   +R +E A+  ++       D  LG 
Sbjct: 64  PDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKC---APDAGLGV 120

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQN-SVVSWTVMISGYI 251
            +HA  V         + +A AL+ MY   G +  A+++F+   ++ + VSW  M+S ++
Sbjct: 121 QVHAVAVSTGLSGD--IFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFV 178

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           + +  ++ V LF EM+   V P+E     ++  C     L+ G+ +HA ++R G++  + 
Sbjct: 179 KNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVF 238

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
            ANALVDMY K  +I  A  +F  +   DV+ WNA IS          A EL + MK S 
Sbjct: 239 TANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSG 298

Query: 372 VRPNEVTMVGLLS--LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
           + PN  T+  +L       AGA  +G+ +H ++ K   + D  +  ALVDMYAK G ++ 
Sbjct: 299 LVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDD 358

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A ++F     +D+ +WNA+++G    GC  E+L  F  M + G   N  T   +L + + 
Sbjct: 359 ARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTAS 418

Query: 490 AGLVTEGKSV 499
              +++   V
Sbjct: 419 LEAISDTTQV 428



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 194/388 (50%), Gaps = 16/388 (4%)

Query: 171 SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQ 230
           S  ++  +++ +A    + LG  IHA ++++     L  A    L+  YSKC     A++
Sbjct: 3   SPESISPLLTRYAATQSLFLGAHIHAHLLKS----GLLHAFRNHLLSFYSKCRLPGSARR 58

Query: 231 LFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGG 290
           +F+       VSW+ +++ Y       E +  F  M    V  +E   L ++++C    G
Sbjct: 59  VFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFA-LPIVLKCAPDAG 117

Query: 291 LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD-GMKSKDVMIWNAVIS 349
           L  G  +HA  +  G    + +ANALV MYG    +  AR +FD   + ++ + WN ++S
Sbjct: 118 L--GVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMS 175

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
           A+ +      A ELF  M  S VRPNE     +++ CT +  LE G+ +H  + + G + 
Sbjct: 176 AFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDK 235

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           DV    ALVDMY+K GD++ A  +F +    D+  WNA ++G  +HG  + AL   + M+
Sbjct: 236 DVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMK 295

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL---GLVPKIEHYG-CMVDLLGR 525
            SG+ PN  T   +L A         G     + +HG          ++ G  +VD+  +
Sbjct: 296 SSGLVPNVFTLSSILKA---CAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAK 352

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            GLLD+A ++ + +P R ++++W AL++
Sbjct: 353 YGLLDDARKVFEWIP-RKDLLLWNALIS 379



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 77/317 (24%), Positives = 159/317 (50%), Gaps = 4/317 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+L++          +L+++  MRK GS+++  T+  +LK+ A +       ++H 
Sbjct: 371 LLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHA 430

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A K G   D++V N LI  Y +C  L  A  +F+E  + +++++++MI    +    E+
Sbjct: 431 LAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMITALSQCDHGED 490

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+++  EM    + P    + S+++  A ++  + GK +HA +++  +     V    AL
Sbjct: 491 AIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIK--RKFMTDVFAGNAL 548

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +  Y+KCG++  A   F+ L    VVSW+ MI G  +       + +F  M++E + P+ 
Sbjct: 549 VYTYAKCGSIEDADLAFSGLPDKGVVSWSAMIGGLAQHGHGKRALDVFRRMVDERIAPNH 608

Query: 276 ITILSLIIECGFVGGLQLGK-WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           IT+ S++  C   G +   K +  +     G + +    + ++D+ G+  ++  A  L +
Sbjct: 609 ITLTSVLCACNHAGLVDEAKGYFSSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVN 668

Query: 335 GMK-SKDVMIWNAVISA 350
            M    +  +W A+++A
Sbjct: 669 SMPFEANAAVWGALLAA 685


>gi|147834193|emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
          Length = 826

 Score =  366 bits (939), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 199/637 (31%), Positives = 343/637 (53%), Gaps = 20/637 (3%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRY----------------NSLVTSY 46
            +N +   E+  Q +  I  + +   Y ++ N    Y                 S ++S 
Sbjct: 5   FRNAYKVFEEITQRNVFIRNSAYSLYYRSMFNTYAYYEEPVEFHGEKDNVISWTSKISSL 64

Query: 47  IKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDA 106
           +K N+   A+ ++  M       ++ T+ ++++A + + +  + + I G  IK G + + 
Sbjct: 65  VKQNQSELAVGLFKMMLMTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEV 124

Query: 107 YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM 166
            V+ ALI  YS+    +  + +F++ P +D+V WS M+    + G   EA E+ R M++ 
Sbjct: 125 SVATALIGFYSDYDMGIVWK-IFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYD 183

Query: 167 DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLA 226
            + P+ V+++S++   A+V  +  GK IH   ++        V    +L+DMY+KC N  
Sbjct: 184 GVEPNHVSIVSILPACANVGALLFGKEIHGFSIKKMFHPLTNVH--NSLVDMYAKCRNFK 241

Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
            +  +F+++ +  ++SWT +I G I  +   E  + F+ M        E  +  LI+   
Sbjct: 242 ASMLVFDQILEKDLISWTTIIRGCIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAII 301

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
                + G   H ++L+NG    +++  AL+ MY K  E+ SA  +FD +  KD + W+A
Sbjct: 302 QADEHKFGIAFHGFLLKNGLLAFVSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSA 361

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           +IS +A +     A E F  M+ +  RPNE+T V LL  C+  GA E+G+ +  +  K G
Sbjct: 362 MISVHAHSRHPYNALETFKQMQSTDERPNEITFVSLLQACSLIGAQELGESIQAHATKAG 421

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
              +  L +AL+D+Y K G +N    +F+E   +D+  W++M+ GYG++GCG+EAL  F 
Sbjct: 422 YLSNAFLSSALIDLYCKFGRINQGRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFS 481

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRA 526
           +M   GVKPN + FI +L+ACSH GL  EG S F  M    G++PK+ HY CMVDL+ R 
Sbjct: 482 NMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRR 541

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAASK-LHKNPSMGEIAATQILEIEPQNYGYNVLM 585
           G ++ A + +  MP+ P+  +WGALLA  +  H +  + E+ A +++ ++PQN  Y V++
Sbjct: 542 GNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAELVAERLIGLDPQNTSYYVIL 601

Query: 586 SNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
           SN+YA   RW DV  +R+++ E  +KKE G+S +E  
Sbjct: 602 SNLYAEQGRWGDVERLRKLVDEKGLKKEMGYSMIEAQ 638


>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial-like [Glycine max]
          Length = 912

 Score =  366 bits (939), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 226/688 (32%), Positives = 352/688 (51%), Gaps = 108/688 (15%)

Query: 34  NPLTR-----YNSLVTSYIKNNKPSSALNIY--AFMRKNGSEVDNFTIPTILKACAQVLM 86
           NP+ R     ++S   +      P   + I+  A + +N  E +   + + LK C+    
Sbjct: 229 NPILRSKWVSFSSSTNASPHVQDPQHFIGIFCNARLHQNHYECE-LALVSALKYCSS--- 284

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS------------------------- 121
           +  G+++H   +K GL  + ++ N+LI MY++ GS                         
Sbjct: 285 SSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCG 344

Query: 122 ------LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAM 175
                 L +AR LFD MP++  VS++TMI G  +     EALEV ++MR   + P+++ +
Sbjct: 345 YAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTL 404

Query: 176 ISMVSLFADVADVDLGKAIHACVVRNCKDEKL--------------GVAIATALIDM--- 218
           ++++   +   ++   + IHA  ++   +  +              GV  A  L D    
Sbjct: 405 VNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPE 464

Query: 219 ------------YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
                       Y+K G +  A++LF R+    V+SW  MI GYI  N ++E + ++  M
Sbjct: 465 VNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVMYRAM 524

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF------------------ 308
           +   +  +EI +++L+  CG +  +  G  LH  +++ GF+                   
Sbjct: 525 LRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMM 584

Query: 309 -------------SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
                         L   NALV  + K R +  AR +FD M  +DV  W+ +IS YAQ  
Sbjct: 585 DLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTD 644

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
               A ELF  M  S ++PNEVTMV + S     G L+ G+W H YI  + + ++  L+ 
Sbjct: 645 QSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRA 704

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRD----ICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
           AL+DMYAKCG +N A + F++   RD    +  WNA++ G   HG     L  F DM+R 
Sbjct: 705 ALIDMYAKCGSINSALQFFNQ--IRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQRY 762

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
            +KPN ITFIG+L+AC HAGLV  G+ +F  M     + P I+HYGCMVDLLGRAGLL+E
Sbjct: 763 NIKPNPITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEE 822

Query: 532 AHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAV 591
           A EMI+SMP++ ++++WG LLAA + H + ++GE AA  +  + P + G  VL+SNIYA 
Sbjct: 823 AEEMIRSMPMKADIVIWGTLLAACRTHGDVNIGERAAESLAGLAPSHGGGKVLLSNIYAD 882

Query: 592 ANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           A RW DV+ VRR ++  R+++ PG S V
Sbjct: 883 AGRWEDVSLVRRAIQNQRMERMPGCSGV 910


>gi|356509887|ref|XP_003523674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Glycine max]
          Length = 750

 Score =  365 bits (938), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 213/589 (36%), Positives = 335/589 (56%), Gaps = 22/589 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTI------LKACAQVLMTHLGKE 92
           + +L+  ++ N +P   L     +R     V++   P          AC  +     G  
Sbjct: 172 WTALIIGHVHNGEPEKGLRC---LRHVHGVVEDDEKPNAKTWEGGFLACGNLGAVSEGSC 228

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HG  +KNG+   +++ ++++ MYS+CG    A   F E+ ++D++ W+++I  Y R G+
Sbjct: 229 LHGVVVKNGVA--SFIQSSVLDMYSKCGVPREAYRSFCEVIHKDLLCWTSVIGVYARIGM 286

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVA 210
             E L + REM+  +IRP  V +  ++S F +  DV  GKA H  ++R     DEK    
Sbjct: 287 MGECLRLFREMQENEIRPDGVVVGCVLSGFGNSMDVFQGKAFHGVIIRRYYVDDEK---- 342

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           +  +L+ MY K G L+ A+++F  L Q S   W  M+ GY +  E  + V LF EM    
Sbjct: 343 VNDSLLFMYCKFGMLSLAERIF-PLCQGSGDGWNFMVFGYGKVGENVKCVELFREMQWLG 401

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF-SLAMANALVDMYGKCREIRSA 329
           +    I I S I  C  +G + LG+ +H  +++   +  ++++ N+LV+MYGKC ++  A
Sbjct: 402 IHSETIGIASAIASCAQLGAVNLGRSIHCNVIKGFLDGKNISVTNSLVEMYGKCGKMTFA 461

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             +F+  ++ DV+ WN +IS++      ++A  LF  M     +PN  T+V +LS C+  
Sbjct: 462 WRIFNTSET-DVVSWNTLISSHVHIKQHEEAVNLFSKMVREDQKPNTATLVVVLSACSHL 520

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            +LE G+ +H YI + G  +++ L TAL+DMYAKCG +  +  +F   + +D+  WNAM+
Sbjct: 521 ASLEKGERVHCYINESGFTLNLPLGTALIDMYAKCGQLQKSRMVFDSMMEKDVICWNAMI 580

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           +GYGM+G  E AL  F  ME S V PNGITF+ LL+AC+HAGLV EGK +F +M     +
Sbjct: 581 SGYGMNGYAESALEIFQHMEESNVMPNGITFLSLLSACAHAGLVEEGKYMFARM-KSYSV 639

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            P ++HY CMVDLLGR G + EA  M+ SMP+ P+  VWGALL   K H    MG   A 
Sbjct: 640 NPNLKHYTCMVDLLGRYGNVQEAEAMVLSMPISPDGGVWGALLGHCKTHNQIEMGIRIAK 699

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKE-IRVKKEPGFS 617
             +++EP+N GY ++M+N+Y+   RW +   VRR MKE   + K+ G+S
Sbjct: 700 YAIDLEPENDGYYIIMANMYSFIGRWEEAENVRRTMKERCSMGKKAGWS 748



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 143/523 (27%), Positives = 259/523 (49%), Gaps = 21/523 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YNS + S    +     L++++ MR +    ++FT+P ++ A A + +   G  +H  A 
Sbjct: 74  YNSFLKSLFSRSLFPRVLSLFSHMRASNLSPNHFTLPIVVSAAAHLTLLPHGASLHALAS 133

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL    + S + + +YS CG +  AR +FDE+P RDVV+W+ +I G+   G PE+ L 
Sbjct: 134 KTGL---FHSSASFVSLYSRCGRMELARKVFDEIPKRDVVAWTALIIGHVHNGEPEKGLR 190

Query: 159 VMREMRFM---DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA--IAT 213
            +R +  +   D +P+            ++  V  G  +H  VV+N      GVA  I +
Sbjct: 191 CLRHVHGVVEDDEKPNAKTWEGGFLACGNLGAVSEGSCLHGVVVKN------GVASFIQS 244

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           +++DMYSKCG    A + F  +    ++ WT +I  Y R   + E +RLF EM E  + P
Sbjct: 245 SVLDMYSKCGVPREAYRSFCEVIHKDLLCWTSVIGVYARIGMMGECLRLFREMQENEIRP 304

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
             + +  ++   G    +  GK  H  I+R  +     + ++L+ MY K   +  A  +F
Sbjct: 305 DGVVVGCVLSGFGNSMDVFQGKAFHGVIIRRYYVDDEKVNDSLLFMYCKFGMLSLAERIF 364

Query: 334 DGMK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
              + S D   WN ++  Y +     K  ELF  M+   +    + +   ++ C + GA+
Sbjct: 365 PLCQGSGDG--WNFMVFGYGKVGENVKCVELFREMQWLGIHSETIGIASAIASCAQLGAV 422

Query: 393 EMGKWLHTYIEKQGLE-VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
            +G+ +H  + K  L+  ++ +  +LV+MY KCG +  A+R+F+ +   D+  WN +++ 
Sbjct: 423 NLGRSIHCNVIKGFLDGKNISVTNSLVEMYGKCGKMTFAWRIFNTS-ETDVVSWNTLISS 481

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           +      EEA+  F  M R   KPN  T + +L+ACSH   + +G+ V    ++  G   
Sbjct: 482 HVHIKQHEEAVNLFSKMVREDQKPNTATLVVVLSACSHLASLEKGERV-HCYINESGFTL 540

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            +     ++D+  + G L ++  +  SM +  ++I W A+++ 
Sbjct: 541 NLPLGTALIDMYAKCGQLQKSRMVFDSM-MEKDVICWNAMISG 582



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 11/261 (4%)

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCR-EIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
            HA  + +G   +L MA+ L+ +Y     +  S  TLF  + SKD  ++N+ + +     
Sbjct: 26  FHALTVTSGHSTNLFMASKLISLYDSLNNDPSSCSTLFHSLPSKDTFLYNSFLKSLFSRS 85

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
              +   LF HM+ S + PN  T+  ++S       L  G  LH    K GL        
Sbjct: 86  LFPRVLSLFSHMRASNLSPNHFTLPIVVSAAAHLTLLPHGASLHALASKTGLFHS---SA 142

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME---RSG 472
           + V +Y++CG +  A ++F E   RD+  W A++ G+  +G  E+ L     +       
Sbjct: 143 SFVSLYSRCGRMELARKVFDEIPKRDVVAWTALIIGHVHNGEPEKGLRCLRHVHGVVEDD 202

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
            KPN  T+ G   AC + G V+EG  +   +V   G+   I+    ++D+  + G+  EA
Sbjct: 203 EKPNAKTWEGGFLACGNLGAVSEGSCLHGVVVKN-GVASFIQ--SSVLDMYSKCGVPREA 259

Query: 533 HEMIKSMPLRPNMIVWGALLA 553
           +     + +  +++ W +++ 
Sbjct: 260 YRSFCEV-IHKDLLCWTSVIG 279


>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Brachypodium distachyon]
          Length = 678

 Score =  365 bits (938), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 199/575 (34%), Positives = 318/575 (55%), Gaps = 13/575 (2%)

Query: 51  KPSSALNIYAFMRKN--GSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYV 108
           + + A+ ++  MR+     + D   +   LKA  +      G+ +H   +K G  GD +V
Sbjct: 106 RHAEAVAVHRDMRRRCPAEQEDVVVLSLALKAAVRSADFGYGRRLHCDVVKAG-GGDLFV 164

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI 168
            N L+ MY++ G L +AR +FD +P+R+VVSW++M+ G  + GL +E L +  EMR   I
Sbjct: 165 MNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESI 224

Query: 169 RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGN 224
            PSE  M S++     +  +  G+ IH  V+++      G+     I  A++DMY KCG 
Sbjct: 225 LPSEYTMASVLMACTMLGSLHQGRLIHGSVMKH------GLVSNHFITAAMLDMYVKCGE 278

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
              A+Q+F+ L+   +V WT MI GY +     + + LF +     + P+ +TI +++  
Sbjct: 279 AEDARQVFDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSA 338

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
              +  L LG+ +H   ++ G   +  + NALVDMY KC+ +  A+ +F  + +KDV+ W
Sbjct: 339 SAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTW 398

Query: 345 NAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK 404
           N++I+ YA+      A  LF HM+V    P+ +++V  LS C   G L +GK  HTY  K
Sbjct: 399 NSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVK 458

Query: 405 QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIF 464
                ++ + TAL+++Y KC D+  A R+FSE   R+   W AM+ GYGM G    ++  
Sbjct: 459 HAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDL 518

Query: 465 FVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLG 524
           F +M +  ++PN   F  +L+ CSH G+VT GK  F+ M H   + P ++HY CMVD+L 
Sbjct: 519 FNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKKCFESMAHYFNITPSMKHYACMVDVLA 578

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVL 584
           RAG L+EA E I+ MP++ +  +W A L   KLH      E A  +++ + P    + V+
Sbjct: 579 RAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLHSRLEFAEEAVNRMMVLHPDTPDFCVM 638

Query: 585 MSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           MSN+Y    RW+    +R++MKE  + K PG SSV
Sbjct: 639 MSNLYTSYGRWDKSLAIRKLMKERGLVKLPGCSSV 673



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 150/507 (29%), Positives = 259/507 (51%), Gaps = 14/507 (2%)

Query: 51  KPSSALNIYAF--MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYV 108
           +PS+  + ++   + +  S   N  +  +L AC  +      + +H   + +GL      
Sbjct: 6   RPSATPDAHSVDHLPRASSPDANPLLHRLLPACTTLPSL---RALHARLLAHGLLRGLRA 62

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI 168
              L+  Y+  G L SAR + DE P+ D  ++   +  +   G   EA+ V R+MR    
Sbjct: 63  HTKLLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAAGRHAEAVAVHRDMRRRCP 122

Query: 169 RPSEVAMISMVSLFADV--ADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLA 226
              E  ++  ++L A V  AD   G+ +H  VV+    +   + +   L+DMY+K G+L 
Sbjct: 123 AEQEDVVVLSLALKAAVRSADFGYGRRLHCDVVKAGGGD---LFVMNNLVDMYAKGGDLK 179

Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
            A+++F+R+   +VVSWT M+SG ++     EG+ LF EM +E++ PSE T+ S+++ C 
Sbjct: 180 NARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACT 239

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
            +G L  G+ +H  ++++G   +  +  A++DMY KC E   AR +FD +   D+++W  
Sbjct: 240 MLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTT 299

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           +I  Y Q      A  LF+  K  ++ PN VT+  +LS   +   L +G+ +H    K G
Sbjct: 300 MIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLG 359

Query: 407 -LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
            +E DV++  ALVDMYAKC  ++ A  +F   + +D+  WN+++AGY  +  G +AL+ F
Sbjct: 360 AVENDVVMN-ALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLF 418

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
             M   G  P+ I+ +  L+AC   G +  GK  F         +  I     +++L  +
Sbjct: 419 SHMRVQGSLPDAISVVNALSACVCLGDLLIGK-CFHTYAVKHAFMSNIYVNTALLNLYNK 477

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALL 552
              L  A  +   M  R N + WGA++
Sbjct: 478 CADLPSAQRVFSEMNDR-NTVTWGAMI 503



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 120/423 (28%), Positives = 223/423 (52%), Gaps = 12/423 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + S+++  ++N      L ++  MR+       +T+ ++L AC  +   H G+ IHG  +
Sbjct: 196 WTSMLSGCLQNGLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSVM 255

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+GL  + +++ A++ MY +CG    AR +FDE+   D+V W+TMI GY + G P +AL 
Sbjct: 256 KHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVGYTQNGSPLDALL 315

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV----AIATA 214
           +  + +FM I P+ V + +++S  A + ++ LG++IH   V      KLG      +  A
Sbjct: 316 LFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISV------KLGAVENDVVMNA 369

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+DMY+KC  L+ AK +F R+    VV+W  +I+GY   +  ++ + LF+ M  +   P 
Sbjct: 370 LVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPD 429

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            I++++ +  C  +G L +GK  H Y +++ F  ++ +  AL+++Y KC ++ SA+ +F 
Sbjct: 430 AISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFS 489

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M  ++ + W A+I  Y        + +LF  M    ++PNE     +LS C+  G + +
Sbjct: 490 EMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTV 549

Query: 395 G-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGY 452
           G K   +      +   +     +VD+ A+ G++  A     +  +  D  +W A + G 
Sbjct: 550 GKKCFESMAHYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLHGC 609

Query: 453 GMH 455
            +H
Sbjct: 610 KLH 612


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  365 bits (938), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 187/593 (31%), Positives = 339/593 (57%), Gaps = 4/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+V+  ++N +   AL ++  M+  G  ++++T   +L+ CA++ +  LG+E+H   +
Sbjct: 235 WNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALL 294

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G + +    NAL+ MY++ G + SA  +F ++  +D +SW++M+  Y +     EA++
Sbjct: 295 KCGSELNIQC-NALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAID 353

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
              EM     +P    ++S+ S    ++ ++ G+  HA  ++      L V     L+DM
Sbjct: 354 FFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVG--NTLMDM 411

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCG++  + ++F  +     +SWT +++ + + +  +E + +  E+ +E +    + I
Sbjct: 412 YIKCGSIECSAKVFESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMI 471

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  + L K +H Y +RNG    L + N L+D+YG+C E   +  LF  ++ 
Sbjct: 472 GSILETCCGLKSISLLKQVHCYAIRNGL-LDLILENRLIDIYGECGEFDHSLNLFQRVEK 530

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD++ W ++I+       ++ A  LF  M+ + ++P+ V +V +L       +L  GK +
Sbjct: 531 KDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQV 590

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ ++   ++  + ++LVDMY+ CG +N A R+F  A  +D+ +W AM+   GMHG G
Sbjct: 591 HGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHG 650

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           ++A+  F  M ++G+ P+ ++F+ LL ACSH+ LV EGK   D MV    L P  EHY C
Sbjct: 651 KQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGKHYLDIMVSKYRLKPWQEHYAC 710

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VD+LGR+G  +EA+E IK+MP+ P   VW ALL A ++H+N  +  +AA ++LE+EP N
Sbjct: 711 VVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACRVHRNYGLAVVAANKLLELEPDN 770

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            G  +L+SN++A   +WN+    R  M E  ++K P  S +E+   +H F  G
Sbjct: 771 PGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPACSWIEIGNNIHTFTSG 823



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 277/529 (52%), Gaps = 19/529 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKN---GSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +N+LV +Y+ +     A+ +Y  MR +   GS  D  T+ ++LKAC        G E+HG
Sbjct: 129 WNALVGAYLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHG 188

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFD--EMPNRDVVSWSTMIRGYHRGGLP 153
            A+K GLD    V+NALI MY++CG L SA  +F+  +   RDV SW++++ G  + G  
Sbjct: 189 LAVKVGLDKSTLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRT 248

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            EAL + R M+      +    ++++ + A++  + LG+ +HA +++ C  E L +    
Sbjct: 249 LEALALFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLK-CGSE-LNIQ-CN 305

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+ MY+K G +  A ++F ++ +   +SW  M+S Y++ +   E +  F EM++    P
Sbjct: 306 ALLVMYAKYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQP 365

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
               ++SL    G +  L  G+  HAY ++      L + N L+DMY KC  I  +  +F
Sbjct: 366 DHACVVSLSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVF 425

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + M  +D + W  +++ +AQ+    +A E+ + ++   +  + + +  +L  C    ++ 
Sbjct: 426 ESMGIRDHISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSIS 485

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           + K +H Y  + GL +D+IL+  L+D+Y +CG+ + +  LF     +DI  W +M+    
Sbjct: 486 LLKQVHCYAIRNGL-LDLILENRLIDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCT 544

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +G    A+  F +M+++ ++P+ +  + +L A +    +T+GK      VHG  +    
Sbjct: 545 NNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQ-----VHGFLIRRNF 599

Query: 514 EHYG----CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
              G     +VD+    G ++ A  + +    + ++++W A++ A+ +H
Sbjct: 600 PIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCK-DVVLWTAMINATGMH 647



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 222/471 (47%), Gaps = 14/471 (2%)

Query: 90  GKEIHGFAIKNGL---DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
           G+++H  A+  G    D D +++  L+ MY  CG +  AR LF+ MP R V SW+ ++  
Sbjct: 76  GRQVHAHAVTTGSLNEDDDGFLATKLVFMYGRCGRVDDARRLFNGMPARTVFSWNALVGA 135

Query: 147 YHRGGLPEEALEVMREMRFMDI---RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
           Y   G   EA+ V   MR        P    + S++       D   G  +H   V+   
Sbjct: 136 YLSSGSAGEAMRVYGAMRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGL 195

Query: 204 DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS--VVSWTVMISGYIRCNEINEGVR 261
           D+     +A ALI MY+KCG L  A ++F  L Q++  V SW  ++SG ++     E + 
Sbjct: 196 DKS--TLVANALIGMYAKCGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALA 253

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           LF  M       +  T ++++  C  +G L LG+ LHA +L+ G E ++   NAL+ MY 
Sbjct: 254 LFRGMQSAGFPMNSYTSVAVLQVCAELGLLSLGRELHAALLKCGSELNI-QCNALLVMYA 312

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           K   + SA  +F  +  KD + WN+++S Y Q     +A + F  M     +P+   +V 
Sbjct: 313 KYGRVDSALRVFGQIAEKDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVS 372

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           L S       L  G+  H Y  KQ L  D+ +   L+DMY KCG +  + ++F     RD
Sbjct: 373 LSSALGHLSRLNNGREFHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIRD 432

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
              W  ++A +       EAL   +++++ G+  + +    +L  C     ++  K V  
Sbjct: 433 HISWTTILACFAQSSRHSEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHC 492

Query: 502 KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
             +    L   +E+   ++D+ G  G  D +  + + +  + +++ W +++
Sbjct: 493 YAIRNGLLDLILENR--LIDIYGECGEFDHSLNLFQRVE-KKDIVSWTSMI 540



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 81/157 (51%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + S++     N + + A+ ++  M+K   + D+  + +IL A A +     GK++HG
Sbjct: 533 IVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHG 592

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F I+     +  V ++L+ MYS CGS+  A  +F+    +DVV W+ MI      G  ++
Sbjct: 593 FLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFERAKCKDVVLWTAMINATGMHGHGKQ 652

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           A+++ + M    + P  V+ ++++   +    V+ GK
Sbjct: 653 AIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEGK 689


>gi|115467784|ref|NP_001057491.1| Os06g0314100 [Oryza sativa Japonica Group]
 gi|54291635|dbj|BAD62428.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113595531|dbj|BAF19405.1| Os06g0314100 [Oryza sativa Japonica Group]
 gi|125597005|gb|EAZ36785.1| hypothetical protein OsJ_21122 [Oryza sativa Japonica Group]
          Length = 992

 Score =  365 bits (937), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 189/580 (32%), Positives = 339/580 (58%), Gaps = 7/580 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL++ Y+ NNK +  +     M+  G + D  T+ +++  C      H+GK IH +A+
Sbjct: 413 WNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAV 472

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++ L+ +  V NAL+ MY++CG L     LF  M  R ++SW+T+I G+   G     L 
Sbjct: 473 RSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLR 532

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN-CKDEKLGVAIATALID 217
              +MR  D++   V +I+++S  + + D+ +G+++H+  +R+ C    L V++A ALI 
Sbjct: 533 FFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCN---LDVSVANALIT 589

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+ CG +   ++LF+ L+  + +S+  +++GY + N   E + LF  MI+ +  P+ IT
Sbjct: 590 MYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFEEILPLFYHMIKNDQKPNIIT 649

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           +L+L+  C     LQ GK +H+Y +RN  +   ++  + + MY +   +     LF  + 
Sbjct: 650 LLNLLPICH--SQLQ-GKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLFCLVG 706

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            ++ ++WNA++SA  Q      AF+ F  ++   V+ + VTM+ L+S C++ G  ++ + 
Sbjct: 707 ERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQLGKADLAEC 766

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +     ++G +  +I+  AL+DM+++CG ++ A ++F  ++ +D   W+ M+  Y MHG 
Sbjct: 767 VTAIALQKGFDGTIIVLNALIDMHSRCGSISFARKIFDISMEKDSVSWSTMINAYSMHGD 826

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G  AL  F+ M  SG+KP+ ITF+ +L+ACS +G + +G+++F  M+   G+ P++EHY 
Sbjct: 827 GGSALDLFLMMVSSGIKPDDITFVSVLSACSRSGFLEQGRTLFRSMLADHGITPRMEHYA 886

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLLGR G LDEA++++ +MP RP+  +  +LL A + H N  +GE     + E +  
Sbjct: 887 CMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGACRFHGNSKLGESVGKILTESDHG 946

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
           N    V++SNIYA A +W+D   +R  M+   + K+ G S
Sbjct: 947 NPRSYVMLSNIYASAGKWSDYERLRSDMEAKGLIKDVGVS 986



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 269/519 (51%), Gaps = 7/519 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N++++ Y  N     A      M+++G   +  ++  I+   + + +   G  +H 
Sbjct: 208 LISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHA 267

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           FA+K+G+ GD  ++ A I MY+  G L S+  LF +    ++VS ++MI    + G  E+
Sbjct: 268 FALKSGVLGDESLTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEK 327

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A  V R MR   + P+ V ++S++   ++   ++ G+++H  V++    E+  V++ +AL
Sbjct: 328 AFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQ--VSVVSAL 385

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           + MYSK G+L  A  LF+ + + S + W  +ISGY+  N+ N  +     M  E V P  
Sbjct: 386 VSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDA 445

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T++S+I +C     L +GK +HAY +R+  E + ++ NAL+ MY  C ++     LF  
Sbjct: 446 LTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHT 505

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M+ + ++ WN +IS +A+          F  M+++ ++ + VT++ L+S  +    + +G
Sbjct: 506 MEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVG 565

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H+   + G  +DV +  AL+ MY  CG +    +LF      +   +NA+M GY  +
Sbjct: 566 ESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKN 625

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
              EE L  F  M ++  KPN IT + LL  C H+ L  +GK+V    +     + +   
Sbjct: 626 NLFEEILPLFYHMIKNDQKPNIITLLNLLPIC-HSQL--QGKTVHSYAIRNFSKL-ETSL 681

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +   + +  R   L+  H +   +  R N IVW A+L+A
Sbjct: 682 FTSAICMYSRFNNLEYCHNLFCLVGERNN-IVWNAILSA 719



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/540 (24%), Positives = 272/540 (50%), Gaps = 7/540 (1%)

Query: 21  IKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA 80
           + +     + ++++ L   NS+++  +++     A  ++  MR  G   +  T+ +IL  
Sbjct: 294 LSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPC 353

Query: 81  CAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSW 140
           C+     + G+ +HG  IK GL     V +AL+ MYS+ G L SA +LF  +  +  + W
Sbjct: 354 CSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLW 413

Query: 141 STMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR 200
           +++I GY         +  +R M+   + P  + +IS++S      D+ +GK+IHA  VR
Sbjct: 414 NSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVR 473

Query: 201 NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
           +    +L  ++  AL+ MY+ CG L+   +LF+ +   +++SW  +ISG+    +    +
Sbjct: 474 S--RLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACL 531

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
           R F +M   ++    +T+++LI     +  + +G+ +H+  +R+G    +++ANAL+ MY
Sbjct: 532 RFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVANALITMY 591

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
             C  I++   LFD + S + + +NA+++ Y + +  ++   LF HM  +  +PN +T++
Sbjct: 592 TNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFEEILPLFYHMIKNDQKPNIITLL 651

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
            LL +C        GK +H+Y  +   +++  L T+ + MY++  ++   + LF     R
Sbjct: 652 NLLPICHSQ---LQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLFCLVGER 708

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           +  +WNA+++          A  +F  ++   VK + +T + L++ACS  G     + V 
Sbjct: 709 NNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQLGKADLAECVT 768

Query: 501 DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
              +   G    I     ++D+  R G +  A + I  + +  + + W  ++ A  +H +
Sbjct: 769 AIALQK-GFDGTIIVLNALIDMHSRCGSISFARK-IFDISMEKDSVSWSTMINAYSMHGD 826



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 220/416 (52%), Gaps = 6/416 (1%)

Query: 26  KFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVL 85
           K  +T  +  L  +N++++ + +N    + L  +  MR    + D  T+  ++ + + + 
Sbjct: 501 KLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIE 560

Query: 86  MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIR 145
              +G+ +H  AI++G + D  V+NALI MY+ CG + +   LFD + + + +S++ ++ 
Sbjct: 561 DITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMT 620

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           GY +  L EE L +   M   D +P+   +I++++L         GK +H+  +RN    
Sbjct: 621 GYRKNNLFEEILPLFYHMIKNDQKPN---IITLLNLLPICHSQLQGKTVHSYAIRNF--S 675

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           KL  ++ T+ I MYS+  NL Y   LF  + + + + W  ++S  ++C +       F +
Sbjct: 676 KLETSLFTSAICMYSRFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQ 735

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           +   NV    +T+L+LI  C  +G   L + + A  L+ GF+ ++ + NAL+DM+ +C  
Sbjct: 736 IQFLNVKTDAVTMLALISACSQLGKADLAECVTAIALQKGFDGTIIVLNALIDMHSRCGS 795

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           I  AR +FD    KD + W+ +I+AY+       A +LF+ M  S ++P+++T V +LS 
Sbjct: 796 ISFARKIFDISMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSSGIKPDDITFVSVLSA 855

Query: 386 CTEAGALEMGKWL-HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
           C+ +G LE G+ L  + +   G+   +     +VD+  + G ++ AY + +   +R
Sbjct: 856 CSRSGFLEQGRTLFRSMLADHGITPRMEHYACMVDLLGRTGHLDEAYDIVTTMPFR 911



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 233/500 (46%), Gaps = 21/500 (4%)

Query: 65  NGSEVDNFTIPTILKACAQVL-MTHLGK---EIHG-FAIKNGLDGDAYVSNALIQMYSEC 119
           + S   +  IP  + A +++L  T   K   ++H   A+   L  DA V    ++ Y   
Sbjct: 30  DASSTPSSAIPPRVDAVSRLLRATRSAKCLSKLHARLAVTGALREDASVVAGAVERYLFF 89

Query: 120 GSLVSARYLFDEM--PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMIS 177
           G   SA  +F        +V   +  +R +   G   E L + RE+              
Sbjct: 90  GKPASAAAVFAGFYRGRAEVYDLNIAVRCFSDHGFHRELLGLYREV--CAFGSDNFTFPP 147

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
           ++   A V+ + LGK +H  VVR      +GV   TAL+DMY+K G +  ++++F+ +  
Sbjct: 148 VIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQ--TALLDMYAKSGQVDLSRRVFDGMKS 205

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
             ++SW  MISGY     + E      +M ++   P+  +++ ++     +G    G  L
Sbjct: 206 RDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPL 265

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           HA+ L++G     ++  A + MY     + S+ +LF      +++  N++IS   Q    
Sbjct: 266 HAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAW 325

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
           +KAF +F  M+   + PN VT+V +L  C+    +  G+ +H  + K GL   V + +AL
Sbjct: 326 EKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSAL 385

Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
           V MY+K GD++ A  LFS    +   +WN++++GY ++      +     M+  GV P+ 
Sbjct: 386 VSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDA 445

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL----GRAGLLDEAH 533
           +T I +++ C H   +  GKS     +H   +  ++E    +++ L       G L    
Sbjct: 446 LTVISVISKCRHTEDLHVGKS-----IHAYAVRSRLELNESVMNALLAMYADCGQLSICC 500

Query: 534 EMIKSMPLRPNMIVWGALLA 553
           ++  +M +R  +I W  +++
Sbjct: 501 KLFHTMEVR-TLISWNTIIS 519



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 160/303 (52%), Gaps = 4/303 (1%)

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T   +I  C  V  L+LGK +H  ++R G   ++ +  AL+DMY K  ++  +R +FDGM
Sbjct: 144 TFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGM 203

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           KS+D++ WNA+IS Y+   C+ +A E    M+    RPN  ++VG++S+ +  G  + G 
Sbjct: 204 KSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGD 263

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            LH +  K G+  D  L  A + MYA  G ++ +  LF +++  ++   N+M++    HG
Sbjct: 264 PLHAFALKSGVLGDESLTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHG 323

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             E+A   F  M   G+ PN +T + +L  CS+   +  G+SV   MV   GL  ++   
Sbjct: 324 AWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESV-HGMVIKFGLAEQVSVV 382

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK--NPSMGEIAATQILEI 574
             +V +  + G LD A  +  S+  +  ++ W +L++   ++   N  MG +   QI  +
Sbjct: 383 SALVSMYSKLGDLDSAVFLFSSVTEKSQLL-WNSLISGYLVNNKWNMVMGSVRRMQIEGV 441

Query: 575 EPQ 577
           +P 
Sbjct: 442 DPD 444


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  365 bits (937), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 204/601 (33%), Positives = 337/601 (56%), Gaps = 8/601 (1%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I  +  + SL++ Y +N      +++   M+  G   + FT  T+L A A   +   G +
Sbjct: 167 IKNVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQ 226

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H   +KNG +   +V NALI MY +   +  A  +FD M  RD V+W+ MI GY   G 
Sbjct: 227 VHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGF 286

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
             E  ++   MR   ++ S     + + L +   +++  K +H  VV+N  +      I 
Sbjct: 287 YLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYE--FAQDIR 344

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQ-NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
           TAL+  YSKC ++  A +LF+  +  ++VV+WT MI G+++ N   + V LF +M  E V
Sbjct: 345 TALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGV 404

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P+  T  +++   G    L     LHA I++  +E   ++A AL+D Y K   +  +  
Sbjct: 405 RPNHFTYSTVL--AGKPSSLL--SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESAR 460

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +F  + +KD++ W+A+++  AQ    +KA E+FI +    V+PNE T   +++ C+ + A
Sbjct: 461 VFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAA 520

Query: 392 -LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
            +E GK +H    K G    + + +AL+ MY+K G++  A ++F+    RDI  WN+M+ 
Sbjct: 521 TVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMIT 580

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           GYG HG  ++AL  F  M+  G+  + +TFIG+L AC+HAGLV EG+  F+ M+    + 
Sbjct: 581 GYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHID 640

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
            K EHY CMVDL  RAG+ D+A ++I  MP   +  +W  LLAA ++H+N  +G++AA +
Sbjct: 641 KKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEK 700

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIR 630
           ++ ++P +    VL+SNI+AVA  W + A VR++M E +VKKE G S +E+   +  F+ 
Sbjct: 701 LVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIEIKNRIFSFLA 760

Query: 631 G 631
           G
Sbjct: 761 G 761



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 146/528 (27%), Positives = 255/528 (48%), Gaps = 10/528 (1%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  ++ YN L+  + +NN    AL+++  +  +G  VD  T+   LK C  +    +G++
Sbjct: 66  LKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGVLFDQVVGRQ 125

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H  ++K+G   D  V  +L+ MY +       R +FDEM  ++VVSW++++ GY R GL
Sbjct: 126 VHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGL 185

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            +E + ++ +M+   + P+     +++   AD + ++ G  +HA +V+N    +    + 
Sbjct: 186 NDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKN--GFEFTTFVC 243

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            ALI MY K   +  A+ +F+ +     V+W +MI GY       EG ++F  M    V 
Sbjct: 244 NALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVK 303

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
            S     + +  C     L   K LH  +++NG+EF+  +  AL+  Y KC  +  A  L
Sbjct: 304 LSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKL 363

Query: 333 FD-GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           F     + +V+ W A+I  + Q +   KA +LF  M    VRPN  T   +L+       
Sbjct: 364 FSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLA----GKP 419

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
             +   LH  I K   E    + TAL+D Y K G+V  + R+F     +DI  W+AM+ G
Sbjct: 420 SSLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTG 479

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC-SHAGLVTEGKSVFDKMVHGLGLV 510
                  E+A+  F+ + + GVKPN  TF  ++NAC S A  V  GK +    V   G  
Sbjct: 480 LAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKS-GKS 538

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             +     ++ +  + G ++ A ++      R +++ W +++     H
Sbjct: 539 NALCVSSALLTMYSKKGNIESAEKVFTRQEER-DIVSWNSMITGYGQH 585



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 235/476 (49%), Gaps = 33/476 (6%)

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           A  LFDE P +D+  ++ ++  + R     EAL + +++    +    + +   + +   
Sbjct: 57  AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116

Query: 185 VADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
           + D  +G+ +H      C+  K G    V++ T+L+DMY K  +    + +F+ +   +V
Sbjct: 117 LFDQVVGRQVH------CQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNV 170

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           VSWT ++SGY R    +E + L  +M  E V P+  T  +++        ++ G  +HA 
Sbjct: 171 VSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAM 230

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           I++NGFEF+  + NAL+ MY K   +  A  +FD M  +D + WN +I  YA      + 
Sbjct: 231 IVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEG 290

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
           F++F  M+++ V+ +       L LC++   L   K LH  + K G E    ++TAL+  
Sbjct: 291 FQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVT 350

Query: 421 YAKCGDVNGAYRLFSEA-IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGIT 479
           Y+KC  V+ A++LFS A    ++  W AM+ G+  +   ++A+  F  M R GV+PN  T
Sbjct: 351 YSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFT 410

Query: 480 FIGLLNACS-------HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
           +  +L           HA ++   K+ ++K       VP +     ++D   + G + E+
Sbjct: 411 YSTVLAGKPSSLLSQLHAQII---KAYYEK-------VPSVA--TALLDAYVKTGNVVES 458

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMS 586
             +  S+P + +++ W A+L      ++         Q+++  ++P  Y ++ +++
Sbjct: 459 ARVFYSIPAK-DIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVIN 513



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 233/475 (49%), Gaps = 36/475 (7%)

Query: 10  LEQTRQCHAHIIKTHFKFSYTNIINPL-------------------------TRYNSLVT 44
           +E   Q HA I+K  F+F+ T + N L                           +N ++ 
Sbjct: 221 IEGGVQVHAMIVKNGFEFT-TFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIG 279

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
            Y           ++  MR  G ++      T LK C+Q    +  K++H   +KNG + 
Sbjct: 280 GYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEF 339

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEM-PNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
              +  AL+  YS+C S+  A  LF       +VV+W+ MI G+ +    ++A+++  +M
Sbjct: 340 AQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQM 399

Query: 164 RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCG 223
               +RP+     ++++         L   +HA +++    EK+  ++ATAL+D Y K G
Sbjct: 400 SREGVRPNHFTYSTVLA----GKPSSLLSQLHAQIIK-AYYEKVP-SVATALLDAYVKTG 453

Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLII 283
           N+  + ++F  +    +V+W+ M++G  +  +  + + +F ++++E V P+E T  S+I 
Sbjct: 454 NVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVIN 513

Query: 284 ECGFVGG-LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
            C      ++ GK +HA  +++G   +L +++AL+ MY K   I SA  +F   + +D++
Sbjct: 514 ACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIV 573

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTY 401
            WN++I+ Y Q     KA E+F  M+   +  ++VT +G+L+ CT AG +E G K+ +  
Sbjct: 574 SWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIM 633

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY-RDICMWNAMMAGYGMH 455
           I+   ++      + +VD+Y++ G  + A  + +   +     +W  ++A   +H
Sbjct: 634 IKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVH 688



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 183/364 (50%), Gaps = 17/364 (4%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           FS  +  + +  + +++  +++NN    A++++  M + G   ++FT  T+L      L+
Sbjct: 364 FSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL 423

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
           + L  +I    IK   +    V+ AL+  Y + G++V +  +F  +P +D+V+WS M+ G
Sbjct: 424 SQLHAQI----IKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTG 479

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMV-SLFADVADVDLGKAIHACVVRNCKDE 205
             +    E+A+EV  ++    ++P+E    S++ +  +  A V+ GK IHA  V++ K  
Sbjct: 480 LAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSN 539

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
            L   +++AL+ MYSK GN+  A+++F R  +  +VSW  MI+GY +  +  + + +F  
Sbjct: 540 AL--CVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQI 597

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           M  + +   ++T + ++  C   G ++ G K+ +  I     +      + +VD+Y +  
Sbjct: 598 MQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAG 657

Query: 325 EIRSARTLFDGMK-SKDVMIWNAVISAYAQAHC-IDKAFEL--FIHMKVSKVRPNEVTMV 380
               A  + +GM       IW  +++A     C + +  EL      K+  ++PN+    
Sbjct: 658 MFDKAMDIINGMPFPASPTIWRTLLAA-----CRVHRNLELGKLAAEKLVSLQPNDAVGY 712

Query: 381 GLLS 384
            LLS
Sbjct: 713 VLLS 716



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 158/367 (43%), Gaps = 13/367 (3%)

Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
           YA QLF+      +  +  ++  + R N   E + LF ++    +    +T+   +  CG
Sbjct: 56  YAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCG 115

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
            +    +G+ +H   L++GF   +++  +LVDMY K  +    R +FD M  K+V+ W +
Sbjct: 116 VLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTS 175

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           ++S YA+    D+   L   M++  V PN  T   +L    +   +E G  +H  I K G
Sbjct: 176 LLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNG 235

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
            E    +  AL+ MY K   V  A  +F   + RD   WN M+ GY   G   E    F 
Sbjct: 236 FEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFH 295

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG-----CMVD 521
            M  +GVK +   F   L  CS    +      F K +H  G+V     +       ++ 
Sbjct: 296 RMRLAGVKLSRTVFCTALKLCSQQRELN-----FTKQLH-CGVVKNGYEFAQDIRTALMV 349

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNY 579
              +   +DEA ++        N++ W A++     + N         Q+    + P ++
Sbjct: 350 TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHF 409

Query: 580 GYNVLMS 586
            Y+ +++
Sbjct: 410 TYSTVLA 416



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 84/173 (48%)

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
           R A  LFD    KD+  +N ++  +++ +   +A  LF  +  S +  + +T+   L +C
Sbjct: 55  RYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVC 114

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
                  +G+ +H    K G   DV + T+LVDMY K  D      +F E   +++  W 
Sbjct: 115 GVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWT 174

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           ++++GY  +G  +E +     M+  GV PNG TF  +L A +   ++  G  V
Sbjct: 175 SLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQV 227


>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  365 bits (937), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 200/598 (33%), Positives = 344/598 (57%), Gaps = 11/598 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+  Y++  + + A+  ++ M K G +    +   +  A + +        +HG  +
Sbjct: 154 WNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLV 213

Query: 99  KNGLD--GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
           K G +   D YV ++ I MY+E G L  A+ +FD    R+   W+TMI  + +     E 
Sbjct: 214 KLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEG 273

Query: 157 LEVM-REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           +++  + +   D    EV ++S +S  + +   +L + +HA V++N    +  V +  AL
Sbjct: 274 IQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQ--VCVMNAL 331

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I MYS+C ++  + ++F+ + +  VVSW  MIS +++    +E + LF EM ++++    
Sbjct: 332 IAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDS 391

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T+ +L+     +    +GK  H Y+LRNG +F   M + L+DMY K   I +A+ +F+ 
Sbjct: 392 VTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEK 450

Query: 336 MKS--KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
             S  +D   WN+++S Y Q   +D+AF +   M   KV PN VT+  +L  C  +G ++
Sbjct: 451 SFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYID 510

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            GK LH +  +  L+ +V + TAL+DMY+K G +  A  +FS+A  + I  ++ M+ GYG
Sbjct: 511 WGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYG 570

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            HG GE AL  F  M++SG++P+ +T + +L+ACS+AGLV EG  +F+ M     + P  
Sbjct: 571 QHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPST 630

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN-MIVWGALLAASKLHKNPSMGEIAATQIL 572
           EH+ C+ D+LGRAG +D+A+E +  +  + N M +WG+LLAA ++HK   +G++ A ++L
Sbjct: 631 EHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLL 690

Query: 573 EIEPQN--YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           E+E  N   GY+VL+SNIYA    W +V  VR+ M+E  +KKE G S +E+ G ++ F
Sbjct: 691 EMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHF 748



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 158/551 (28%), Positives = 285/551 (51%), Gaps = 32/551 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLGKEIHGF 96
           +N+++   + NN P  AL  Y+ M+ +  +V  D++T  ++LKACA      +GK +H  
Sbjct: 38  WNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAH 97

Query: 97  AIKNGLDGDAYVSNALIQMYSEC------GSLVSA-------RYLFDEMPNRDVVSWSTM 143
            ++  ++    V N+L+ MYS C      G +VS        R +FD M  R VV+W+T+
Sbjct: 98  FLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTL 157

Query: 144 IRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
           I  Y R     EA++    M  + I+PS V+ +++   F+ + D      +H  +V+   
Sbjct: 158 IAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGS 217

Query: 204 DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
           +    + + ++ I MY++ G L +AK++F+   + +   W  MIS +++ N   EG++LF
Sbjct: 218 EYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLF 277

Query: 264 AEMIE-ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
            + +E E+    E+T+LS I     +   +L + LHA++++N     + + NAL+ MY +
Sbjct: 278 FQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSR 337

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C  I ++  +FD M  KDV+ WN +ISA+ Q    D+A  LF  MK   +  + VT+  L
Sbjct: 338 CNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTAL 397

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY--R 440
           LS  ++    ++GK  H Y+ + G++ +  + + L+DMYAK G +  A  +F ++    R
Sbjct: 398 LSAASDLRNPDIGKQTHGYLLRNGIQFEG-MDSYLIDMYAKSGLIEAAQNVFEKSFSHER 456

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           D   WN+MM+GY  +G  ++A +    M    V PN +T   +L AC+ +G +  GK   
Sbjct: 457 DQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQ-- 514

Query: 501 DKMVHGLGLVPKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
              +HG  +   ++        ++D+  ++G +  A E + S     +++ +  ++    
Sbjct: 515 ---LHGFSIRNDLDQNVFVATALIDMYSKSGSIAHA-ENVFSKANEKSIVTYSTMILGYG 570

Query: 557 LHKNPSMGEIA 567
            H    MGE A
Sbjct: 571 QH---GMGESA 578



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/456 (23%), Positives = 221/456 (48%), Gaps = 29/456 (6%)

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM--DIRPSEVAMIS 177
           G L  AR LFD +P    V W+T+I G      P+EAL     M+     ++       S
Sbjct: 18  GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 77

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLA----------- 226
           ++   AD  ++ +GKA+HA  +R   +      +  +L++MYS C +             
Sbjct: 78  VLKACADTRNLVVGKAVHAHFLRCLMNPSR--IVYNSLLNMYSMCSSTTPDGKMVSGYSR 135

Query: 227 --YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
               +++F+ + + +VV+W  +I+ Y+R     E V+ F+ M++  + PS ++ +++   
Sbjct: 136 CDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPA 195

Query: 285 CGFVGGLQLGKWLHAYILRNGFEF--SLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
              +G  +    +H  +++ G E+   L + ++ + MY +   +  A+ +FD    ++  
Sbjct: 196 FSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTE 255

Query: 343 IWNAVISAYAQAHCIDKAFELFIH-MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           +WN +ISA+ Q +   +  +LF   ++      +EVT++  +S  +     E+ + LH +
Sbjct: 256 VWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAF 315

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
           + K      V +  AL+ MY++C  ++ ++++F     +D+  WN M++ +  +G  +EA
Sbjct: 316 VIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEA 375

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC--- 518
           L+ F +M++  +  + +T   LL+A S       GK       HG  L   I+  G    
Sbjct: 376 LMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQ-----THGYLLRNGIQFEGMDSY 430

Query: 519 MVDLLGRAGLLDEAHEMI-KSMPLRPNMIVWGALLA 553
           ++D+  ++GL++ A  +  KS     +   W ++++
Sbjct: 431 LIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMS 466



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 193/353 (54%), Gaps = 22/353 (6%)

Query: 21  IKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA 80
           I T FK         +  +N++++++++N     AL ++  M+K    VD+ T+  +L A
Sbjct: 341 IDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSA 400

Query: 81  CAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE--MPNRDVV 138
            + +    +GK+ HG+ ++NG+  +  + + LI MY++ G + +A+ +F++     RD  
Sbjct: 401 ASDLRNPDIGKQTHGYLLRNGIQFEG-MDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQA 459

Query: 139 SWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACV 198
           +W++M+ GY + GL ++A  ++R+M    + P+ V + S++        +D GK +H   
Sbjct: 460 TWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFS 519

Query: 199 VRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE 258
           +RN  D+   V +ATALIDMYSK G++A+A+ +F++ N+ S+V+++ MI GY +      
Sbjct: 520 IRNDLDQ--NVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGES 577

Query: 259 GVRLFAEMIEENVFPSEITILSLIIECGFVG----GLQLGKWLHA-YILRNGFEFSLAMA 313
            + +F  M +  + P  +T+++++  C + G    GLQ+ + +   Y ++   E    +A
Sbjct: 578 ALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVA 637

Query: 314 NALVDMYGKCREIRSARTLFDGMKSK-DVM-IWNAVISAYAQAHC-IDKAFEL 363
               DM G+   +  A     G+  K +VM IW ++++A     C I K FEL
Sbjct: 638 ----DMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAA-----CRIHKQFEL 681


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  365 bits (937), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 194/592 (32%), Positives = 329/592 (55%), Gaps = 6/592 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + ++++ Y+++     A  ++  + ++G++ +  +  +IL AC        G ++H +  
Sbjct: 221 WTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIK 280

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + GL+ +  V NALI MY+ CGSL +AR +FD + + + VSW+ MI GY  G + EEA  
Sbjct: 281 QAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGEGFM-EEAFR 339

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R+M+    +P      S++++ AD AD++ GK +H+ +VR   +    V +ATALI M
Sbjct: 340 LFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEAD--VTVATALISM 397

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG+L  A+++FN++ + + VSW   I+   R     E  ++F +M  ++V P  +T 
Sbjct: 398 YAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTF 457

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           ++L+  C      + G+++H  I + G   +  +ANAL+ MYG+C ++  AR +F  ++ 
Sbjct: 458 ITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRR 517

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +D+  WNA+I+AY Q      AF+LFI  K    + ++ T + +L        L+ G+ +
Sbjct: 518 RDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKI 577

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  +EK GLE D+ + T L+ MY+KCG +  AY +F     +D+  WNAM+A Y     G
Sbjct: 578 HGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHG 637

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           ++AL  F  M   GV P+  T+  +LNAC+  G +  GK  F   +    +     HY C
Sbjct: 638 QDALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKK-FHTQLKEAAMETDTRHYAC 696

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MV  LGRA LL EA E I+ +    + ++W +LL A ++H N  + E A   +L+++ Q+
Sbjct: 697 MVAALGRASLLKEAEEFIEEISSESDALMWESLLVACRIHHNVGLAETAVEHLLDVKAQS 756

Query: 579 Y-GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
                  + NIYA A RW DV+ ++  M+E  +   P   ++EVN   H F+
Sbjct: 757 SPAVCEQLMNIYAAAGRWEDVSVIKATMREAGLLA-PKSCTIEVNSEFHTFM 807



 Score =  300 bits (769), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 161/481 (33%), Positives = 271/481 (56%), Gaps = 5/481 (1%)

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
           L+ C Q      GK++H        + D Y++N LI MYS+CGS+  A  +F  M ++DV
Sbjct: 58  LQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDV 117

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
           VSW+ MI GY   G  +EA+++  +M+   ++P++ + IS++S       ++ G+ IH+ 
Sbjct: 118 VSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSH 177

Query: 198 VVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN 257
           + +   +    V ++TALI+MY KCG+L  A+++FN + + +VVSWT MISGY++  +  
Sbjct: 178 ITKAGYESD--VNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSK 235

Query: 258 EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALV 317
           E   LF ++I     P++++  S++  C     L+ G  LHAYI + G E  + + NAL+
Sbjct: 236 EAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGNALI 295

Query: 318 DMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEV 377
            MY +C  + +AR +FD ++S + + WNA+I+ Y +   +++AF LF  M+    +P+  
Sbjct: 296 SMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGEGF-MEEAFRLFRDMQQKGFQPDRF 354

Query: 378 TMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
           T   LL++C +   L  GK LH+ I +   E DV + TAL+ MYAKCG +  A ++F++ 
Sbjct: 355 TYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQM 414

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
             ++   WNA +A    HG  +EA   F  M R  V P+ +TFI LLN+C+       G+
Sbjct: 415 PEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGR 474

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
            +  K +   G++        ++ + GR G L +A E+   +  R ++  W A++AA   
Sbjct: 475 YIHGK-IDQWGMLSNNLVANALISMYGRCGKLADAREVFYRI-RRRDLGSWNAMIAAYVQ 532

Query: 558 H 558
           H
Sbjct: 533 H 533



 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 163/516 (31%), Positives = 284/516 (55%), Gaps = 5/516 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++++ Y  + +   A++++  M++ G + +  +  +IL AC   ++   G++IH    
Sbjct: 120 WNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSHIT 179

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G + D  VS ALI MY +CGSL  AR +F+EM  R+VVSW+ MI GY + G  +EA  
Sbjct: 180 KAGYESDVNVSTALINMYCKCGSLELARKVFNEMRERNVVSWTAMISGYVQHGDSKEAFV 239

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + +++     +P++V+  S++    +  D++ G  +HA + +   +++  V +  ALI M
Sbjct: 240 LFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQE--VLVGNALISM 297

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y++CG+LA A+Q+F+ L   + VSW  MI+GY     + E  RLF +M ++   P   T 
Sbjct: 298 YARCGSLANARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRLFRDMQQKGFQPDRFTY 356

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            SL+  C     L  GK LH+ I+R  +E  + +A AL+ MY KC  +  AR +F+ M  
Sbjct: 357 ASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVFNQMPE 416

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K+ + WNA I+   +     +AF++F  M+   V P+ VT + LL+ CT     E G+++
Sbjct: 417 KNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYI 476

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I++ G+  + ++  AL+ MY +CG +  A  +F     RD+  WNAM+A Y  HG  
Sbjct: 477 HGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGAN 536

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
             A   F+  +  G K +  TFI +L A ++   +  G+ +   +V   GL   I     
Sbjct: 537 GSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHG-LVEKAGLEKDIRILTT 595

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           ++ +  + G L +A+ + K++  + +++ W A+LAA
Sbjct: 596 LIKMYSKCGSLRDAYSVFKNVQEK-DVVCWNAMLAA 630



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 88/160 (55%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++ +Y+++    SA +++   +  G + D +T   +L+A A +     G++IHG
Sbjct: 520 LGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHG 579

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              K GL+ D  +   LI+MYS+CGSL  A  +F  +  +DVV W+ M+  Y+     ++
Sbjct: 580 LVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQD 639

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
           AL++ ++MR   + P      S+++  A +  ++ GK  H
Sbjct: 640 ALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKKFH 679


>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 729

 Score =  365 bits (937), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 204/623 (32%), Positives = 342/623 (54%), Gaps = 21/623 (3%)

Query: 10  LEQTRQCHAHIIKTHFKFSYT----NIINPLT-----RYNSLVTSYIKNNKPSSALNIYA 60
           + Q    H  +I  + K  +T    N+ + ++      +N L+  Y +N     A+ ++ 
Sbjct: 87  VNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFV 146

Query: 61  FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECG 120
            M +   + +  TI ++L +C    +   G+ IHGF IK G   D++++NAL+ MY++C 
Sbjct: 147 DMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCD 206

Query: 121 SLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
            L +++ LFDEM  + VVSW+TMI  Y + GL ++A+   +EM      PS V ++++VS
Sbjct: 207 DLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVS 266

Query: 181 LFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
             A   +V        C V  C       ++ T+L+ +Y+K G    AKQL+       +
Sbjct: 267 ANAFPENVH-------CYVVKCGFTN-DASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDL 318

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           ++ T +IS Y    +I   V  F + I+ ++ P  + ++ ++          +G   H Y
Sbjct: 319 ITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGY 378

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
            +++G      +AN L+ +Y +  EI +A +LF  M+ K ++ WN++IS   QA     A
Sbjct: 379 GVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDA 438

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
            ELF  M +   +P+ +T+  LLS C + G L +G+ LH+YI +  + V+  + TAL+DM
Sbjct: 439 MELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDM 498

Query: 421 YAKCGDVNGAYRLFSEAIYRDICM--WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           Y+KCG ++ A ++F     +D C+  WNA+++GY ++G    A   +  ++  G+KP+ I
Sbjct: 499 YSKCGRLDYAEKVFYNI--KDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKI 556

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           TF+G+L AC+H GLV  G   F+ M    GL+P ++HY C+V LLG+ GL  EA E I  
Sbjct: 557 TFLGVLAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINK 616

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDV 598
           M ++P+  VWGALL A  + +   +GE  A ++  +  +N G+ VLMSN+YA+  RW+DV
Sbjct: 617 MEIQPDSAVWGALLNACCIQREVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVGRWDDV 676

Query: 599 AGVRRVMKEIRVKKEPGFSSVEV 621
           A VR +MK+       G S ++V
Sbjct: 677 ARVREMMKDSGGDGCSGVSVIDV 699



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 142/544 (26%), Positives = 272/544 (50%), Gaps = 23/544 (4%)

Query: 26  KFSYTNIINPL-TRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA-CAQ 83
           KF+ T I   L +R N  +   +  N  S AL I+  + +     + FT   ++KA  + 
Sbjct: 2   KFASTTIPCCLRSRPNLSLFHSLFQNATSPALVIFRQILQANVNPNEFTFSLLIKAYLSS 61

Query: 84  VLMTHL-------GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
              TH         ++I    +K G++   +V  +LI +Y + G    AR +FD+M  RD
Sbjct: 62  PSFTHCPSTAALQARQIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRD 121

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           VVSW+ +I GY + G    A+++  +M   + +P++  ++S++        +  G++IH 
Sbjct: 122 VVSWNVLICGYSQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHG 181

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
             ++      L   +  AL+ MY+KC +L  ++ LF+ +++ SVVSW  MI  Y +    
Sbjct: 182 FGIK--AGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLF 239

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
           ++ +  F EM++E   PS +TI++L+    F       + +H Y+++ GF    ++  +L
Sbjct: 240 DKAILYFKEMLKEGFHPSSVTIMNLVSANAF------PENVHCYVVKCGFTNDASVVTSL 293

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           V +Y K     +A+ L+    +KD++   A+IS+Y++   I+ A E FI      ++P+ 
Sbjct: 294 VCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDA 353

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           V ++G+L   T      +G   H Y  K GL  D ++   L+ +Y++  ++  A  LF +
Sbjct: 354 VALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYD 413

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
              + +  WN+M++G    G   +A+  F +M   G KP+ IT   LL+ C   G +  G
Sbjct: 414 MREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIG 473

Query: 497 KSVFDKMVHGLGLVPKIEHY--GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +++   ++       ++E +    ++D+  + G LD A ++  ++   P +  W A+++ 
Sbjct: 474 ETLHSYILRN---NVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIK-DPCLATWNAIISG 529

Query: 555 SKLH 558
             L+
Sbjct: 530 YSLY 533


>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  365 bits (936), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 200/598 (33%), Positives = 344/598 (57%), Gaps = 11/598 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+  Y++  + + A+  ++ M K G +    +   +  A + +        +HG  +
Sbjct: 178 WNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLV 237

Query: 99  KNGLD--GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
           K G +   D YV ++ I MY+E G L  A+ +FD    R+   W+TMI  + +     E 
Sbjct: 238 KLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEG 297

Query: 157 LEVM-REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           +++  + +   D    EV ++S +S  + +   +L + +HA V++N    +  V +  AL
Sbjct: 298 IQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQ--VCVMNAL 355

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I MYS+C ++  + ++F+ + +  VVSW  MIS +++    +E + LF EM ++++    
Sbjct: 356 IAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDS 415

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T+ +L+     +    +GK  H Y+LRNG +F   M + L+DMY K   I +A+ +F+ 
Sbjct: 416 VTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFE-GMDSYLIDMYAKSGLIEAAQNVFEK 474

Query: 336 MKS--KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
             S  +D   WN+++S Y Q   +D+AF +   M   KV PN VT+  +L  C  +G ++
Sbjct: 475 SFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYID 534

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            GK LH +  +  L+ +V + TAL+DMY+K G +  A  +FS+A  + I  ++ M+ GYG
Sbjct: 535 WGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYG 594

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            HG GE AL  F  M++SG++P+ +T + +L+ACS+AGLV EG  +F+ M     + P  
Sbjct: 595 QHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPST 654

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN-MIVWGALLAASKLHKNPSMGEIAATQIL 572
           EH+ C+ D+LGRAG +D+A+E +  +  + N M +WG+LLAA ++HK   +G++ A ++L
Sbjct: 655 EHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVAKKLL 714

Query: 573 EIEPQN--YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           E+E  N   GY+VL+SNIYA    W +V  VR+ M+E  +KKE G S +E+ G ++ F
Sbjct: 715 EMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWIEIAGYMNHF 772



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 158/551 (28%), Positives = 285/551 (51%), Gaps = 32/551 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLGKEIHGF 96
           +N+++   + NN P  AL  Y+ M+ +  +V  D++T  ++LKACA      +GK +H  
Sbjct: 62  WNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAH 121

Query: 97  AIKNGLDGDAYVSNALIQMYSEC------GSLVSA-------RYLFDEMPNRDVVSWSTM 143
            ++  ++    V N+L+ MYS C      G +VS        R +FD M  R VV+W+T+
Sbjct: 122 FLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTL 181

Query: 144 IRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
           I  Y R     EA++    M  + I+PS V+ +++   F+ + D      +H  +V+   
Sbjct: 182 IAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGS 241

Query: 204 DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
           +    + + ++ I MY++ G L +AK++F+   + +   W  MIS +++ N   EG++LF
Sbjct: 242 EYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLF 301

Query: 264 AEMIE-ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
            + +E E+    E+T+LS I     +   +L + LHA++++N     + + NAL+ MY +
Sbjct: 302 FQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSR 361

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C  I ++  +FD M  KDV+ WN +ISA+ Q    D+A  LF  MK   +  + VT+  L
Sbjct: 362 CNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTAL 421

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY--R 440
           LS  ++    ++GK  H Y+ + G++ +  + + L+DMYAK G +  A  +F ++    R
Sbjct: 422 LSAASDLRNPDIGKQTHGYLLRNGIQFEG-MDSYLIDMYAKSGLIEAAQNVFEKSFSHER 480

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           D   WN+MM+GY  +G  ++A +    M    V PN +T   +L AC+ +G +  GK   
Sbjct: 481 DQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQ-- 538

Query: 501 DKMVHGLGLVPKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
              +HG  +   ++        ++D+  ++G +  A E + S     +++ +  ++    
Sbjct: 539 ---LHGFSIRNDLDQNVFVATALIDMYSKSGSIAHA-ENVFSKANEKSIVTYSTMILGYG 594

Query: 557 LHKNPSMGEIA 567
            H    MGE A
Sbjct: 595 QH---GMGESA 602



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/456 (23%), Positives = 221/456 (48%), Gaps = 29/456 (6%)

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM--DIRPSEVAMIS 177
           G L  AR LFD +P    V W+T+I G      P+EAL     M+     ++       S
Sbjct: 42  GQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKCDSYTYSS 101

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLA----------- 226
           ++   AD  ++ +GKA+HA  +R   +      +  +L++MYS C +             
Sbjct: 102 VLKACADTRNLVVGKAVHAHFLRCLMNP--SRIVYNSLLNMYSMCSSTTPDGKMVSGYSR 159

Query: 227 --YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
               +++F+ + + +VV+W  +I+ Y+R     E V+ F+ M++  + PS ++ +++   
Sbjct: 160 CDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPA 219

Query: 285 CGFVGGLQLGKWLHAYILRNGFEF--SLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
              +G  +    +H  +++ G E+   L + ++ + MY +   +  A+ +FD    ++  
Sbjct: 220 FSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTE 279

Query: 343 IWNAVISAYAQAHCIDKAFELFIH-MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           +WN +ISA+ Q +   +  +LF   ++      +EVT++  +S  +     E+ + LH +
Sbjct: 280 VWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAF 339

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
           + K      V +  AL+ MY++C  ++ ++++F     +D+  WN M++ +  +G  +EA
Sbjct: 340 VIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEA 399

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC--- 518
           L+ F +M++  +  + +T   LL+A S       GK       HG  L   I+  G    
Sbjct: 400 LMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQ-----THGYLLRNGIQFEGMDSY 454

Query: 519 MVDLLGRAGLLDEAHEMI-KSMPLRPNMIVWGALLA 553
           ++D+  ++GL++ A  +  KS     +   W ++++
Sbjct: 455 LIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMS 490



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 193/353 (54%), Gaps = 22/353 (6%)

Query: 21  IKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA 80
           I T FK         +  +N++++++++N     AL ++  M+K    VD+ T+  +L A
Sbjct: 365 IDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSA 424

Query: 81  CAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE--MPNRDVV 138
            + +    +GK+ HG+ ++NG+  +  + + LI MY++ G + +A+ +F++     RD  
Sbjct: 425 ASDLRNPDIGKQTHGYLLRNGIQFEG-MDSYLIDMYAKSGLIEAAQNVFEKSFSHERDQA 483

Query: 139 SWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACV 198
           +W++M+ GY + GL ++A  ++R+M    + P+ V + S++        +D GK +H   
Sbjct: 484 TWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFS 543

Query: 199 VRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE 258
           +RN  D+   V +ATALIDMYSK G++A+A+ +F++ N+ S+V+++ MI GY +      
Sbjct: 544 IRNDLDQ--NVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMILGYGQHGMGES 601

Query: 259 GVRLFAEMIEENVFPSEITILSLIIECGFVG----GLQLGKWLHA-YILRNGFEFSLAMA 313
            + +F  M +  + P  +T+++++  C + G    GLQ+ + +   Y ++   E    +A
Sbjct: 602 ALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNIQPSTEHFCCVA 661

Query: 314 NALVDMYGKCREIRSARTLFDGMKSK-DVM-IWNAVISAYAQAHC-IDKAFEL 363
               DM G+   +  A     G+  K +VM IW ++++A     C I K FEL
Sbjct: 662 ----DMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAA-----CRIHKQFEL 705


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  365 bits (936), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 211/633 (33%), Positives = 343/633 (54%), Gaps = 22/633 (3%)

Query: 9    NLEQTRQCHAHIIKTH----FKFSY-TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMR 63
            ++   R+ HA  +K +    F F   +NI      +N  +T ++   +  +A++ +  + 
Sbjct: 831  DVSNNRKRHAEQVKAYAMKMFPFDQGSNIF----AWNKKLTEFLHAGQIVAAIDCFKTLL 886

Query: 64   KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLV 123
            ++    D+ T+  IL A        LG++IH   IK+       VSN+L+ MYS+ G + 
Sbjct: 887  RSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVY 946

Query: 124  SARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV---S 180
            +A   F   P  D++SW+TMI  Y +  L  EA+   R++    ++P +  + S++   S
Sbjct: 947  AAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS 1006

Query: 181  LFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLN 236
               +     LG  +H   +      K G+     ++TALID+YSK G +  A+ L +   
Sbjct: 1007 TGDEGEYFTLGSQVHVYAI------KCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKY 1060

Query: 237  QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
               + SW  ++ GYI+ N+  + +  F+ M E  +   EIT+ + I   G +  L+ GK 
Sbjct: 1061 DFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQ 1120

Query: 297  LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
            + AY ++ GF   L +++ ++DMY KC ++ +A  LF  +   D + W  +IS Y +   
Sbjct: 1121 IQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGD 1180

Query: 357  IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
             D A  ++  M+VS V+P+E T   L+   +   ALE GK +H  + K    +D  + T+
Sbjct: 1181 EDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTS 1240

Query: 417  LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
            LVDMY KCG V  AYR+F +   R +  WNAM+ G   HG  +EAL  F  M+ +G++P+
Sbjct: 1241 LVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPD 1300

Query: 477  GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
             +TFIG+L+ACSH+GL +E    FD M    G+ P+IEHY C+VD LGRAG + EA  +I
Sbjct: 1301 KVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVI 1360

Query: 537  KSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWN 596
             SMP + +  ++ ALL A +   +    +  A ++L ++P +    VL+SNIYA + +W+
Sbjct: 1361 ASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWD 1420

Query: 597  DVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            DV   R +MK   VKK+PGFS ++V   VH F+
Sbjct: 1421 DVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFV 1453



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/526 (23%), Positives = 236/526 (44%), Gaps = 37/526 (7%)

Query: 36   LTRYNSLVTSYIKNNKPS-----SALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
            L  +NS++ +Y +    S         ++  +R+ G  +   T+  +LK C       + 
Sbjct: 677  LVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVS 736

Query: 91   KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
            + +HG+A+K G + D +VS AL+ +Y + G +  AR LFD+MP RD V W+ M++ Y   
Sbjct: 737  ETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796

Query: 151  GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
               +EAL            P    +  ++      +DV   +  HA  V+          
Sbjct: 797  SFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVN--SDVSNNRKRHAEQVK---------- 844

Query: 211  IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
                           AYA ++F     +++ +W   ++ ++   +I   +  F  ++   
Sbjct: 845  ---------------AYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRST 889

Query: 271  VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
            +    +T++ ++        L LG+ +HA ++++ F   + ++N+L++MY K   + +A 
Sbjct: 890  IGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949

Query: 331  TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT--- 387
              F      D++ WN +IS+YAQ +   +A   F  +    ++P++ T+  +L  C+   
Sbjct: 950  KTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGD 1009

Query: 388  EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
            E     +G  +H Y  K G+  D  + TAL+D+Y+K G ++ A  L       D+  WNA
Sbjct: 1010 EGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNA 1069

Query: 448  MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
            +M GY       +AL  F  M   G+  + IT    + A      + +GK +    +  L
Sbjct: 1070 IMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIK-L 1128

Query: 508  GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            G    +     ++D+  + G +  A E+   +  RP+ + W  +++
Sbjct: 1129 GFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMIS 1173



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 220/479 (45%), Gaps = 51/479 (10%)

Query: 89   LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
            LGK  H   + +G   D Y++N LI MYS+CGSL SAR +FD+  +RD+V+W++++  Y 
Sbjct: 629  LGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYA 688

Query: 149  R--GGLPEEALE------VMREMRFMDIRPS--EVAMISMVSLFADVADVDLGKAIHACV 198
            +      E  LE      ++RE  F   R +   +  + ++S F  V++   G A+    
Sbjct: 689  QFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGF 748

Query: 199  VRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE 258
                   +L + ++ AL+++Y K G +  A+ LF+++ +   V W VM+  Y+  +  +E
Sbjct: 749  -------ELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDE 801

Query: 259  GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
             +R F+       FP + + L  +I  G    +   +  HA                 V 
Sbjct: 802  ALRFFSAFHRSGFFP-DFSNLHCVI-GGVNSDVSNNRKRHA---------------EQVK 844

Query: 319  MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
             Y        A  +F   +  ++  WN  ++ +  A  I  A + F  +  S +  + VT
Sbjct: 845  AY--------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVT 896

Query: 379  MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
            +V +LS    A  L++G+ +H  + K      V +  +L++MY+K G V  A + F  + 
Sbjct: 897  LVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSP 956

Query: 439  YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKS 498
              D+  WN M++ Y  +    EA+  F D+ R G+KP+  T   +L ACS      EG+ 
Sbjct: 957  ELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEGEY 1013

Query: 499  -VFDKMVH----GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
                  VH      G++        ++DL  + G +DEA E +       ++  W A++
Sbjct: 1014 FTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA-EFLLHGKYDFDLASWNAIM 1071



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 291 LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
           L+LGK  HA I+ +G      + N L+ MY KC  + SAR +FD    +D++ WN++++A
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 351 YAQ-----AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
           YAQ        + + F LF  ++        +T+  LL LC  +G +++ + +H Y  K 
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
           G E+D+ +  ALV++Y K G V  A  LF +   RD  +WN M+  Y  +   +EAL FF
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF 806

Query: 466 VDMERSGVKPN 476
               RSG  P+
Sbjct: 807 SAFHRSGFFPD 817



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 169/377 (44%), Gaps = 38/377 (10%)

Query: 185 VADVDLGKAIHACVVR--NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVS 242
           +AD+ LGK  HA +V   +  D  L       LI MYSKCG+L  A+Q+F++ +   +V+
Sbjct: 624 MADLKLGKRAHARIVTSGDLPDRYL----TNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679

Query: 243 WTVMISGYIRCNE-----INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
           W  +++ Y +  +     + EG RLF  + E     + +T+  L+  C   G +Q+ + +
Sbjct: 680 WNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETV 739

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           H Y ++ GFE  L ++ ALV++Y K   +  AR LFD M  +D ++WN ++ AY +    
Sbjct: 740 HGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQ 799

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
           D+A   F     S   P+                      LH  I     +V    K   
Sbjct: 800 DEALRFFSAFHRSGFFPDFSN-------------------LHCVIGGVNSDVSNNRKRHA 840

Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
             + A       A ++F      +I  WN  +  +   G    A+  F  + RS +  + 
Sbjct: 841 EQVKAY------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDS 894

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK 537
           +T + +L+A   A  +  G+ +   +V      P +     ++++  +AG++  A +   
Sbjct: 895 VTLVIILSAAVGADDLDLGEQIH-ALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFI 953

Query: 538 SMPLRPNMIVWGALLAA 554
           + P   ++I W  ++++
Sbjct: 954 NSP-ELDLISWNTMISS 969


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  365 bits (936), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 211/633 (33%), Positives = 343/633 (54%), Gaps = 22/633 (3%)

Query: 9    NLEQTRQCHAHIIKTH----FKFSY-TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMR 63
            ++   R+ HA  +K +    F F   +NI      +N  +T ++   +  +A++ +  + 
Sbjct: 831  DVSNNRKRHAEQVKAYAMKMFPFDQGSNIF----AWNKKLTEFLHAGQIVAAIDCFKTLL 886

Query: 64   KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLV 123
            ++    D+ T+  IL A        LG++IH   IK+       VSN+L+ MYS+ G + 
Sbjct: 887  RSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVY 946

Query: 124  SARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV---S 180
            +A   F   P  D++SW+TMI  Y +  L  EA+   R++    ++P +  + S++   S
Sbjct: 947  AAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACS 1006

Query: 181  LFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLN 236
               +     LG  +H   +      K G+     ++TALID+YSK G +  A+ L +   
Sbjct: 1007 TGDEGEYFTLGSQVHVYAI------KCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKY 1060

Query: 237  QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
               + SW  ++ GYI+ N+  + +  F+ M E  +   EIT+ + I   G +  L+ GK 
Sbjct: 1061 DFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQ 1120

Query: 297  LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
            + AY ++ GF   L +++ ++DMY KC ++ +A  LF  +   D + W  +IS Y +   
Sbjct: 1121 IQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGD 1180

Query: 357  IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
             D A  ++  M+VS V+P+E T   L+   +   ALE GK +H  + K    +D  + T+
Sbjct: 1181 EDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTS 1240

Query: 417  LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
            LVDMY KCG V  AYR+F +   R +  WNAM+ G   HG  +EAL  F  M+ +G++P+
Sbjct: 1241 LVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPD 1300

Query: 477  GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
             +TFIG+L+ACSH+GL +E    FD M    G+ P+IEHY C+VD LGRAG + EA  +I
Sbjct: 1301 KVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVI 1360

Query: 537  KSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWN 596
             SMP + +  ++ ALL A +   +    +  A ++L ++P +    VL+SNIYA + +W+
Sbjct: 1361 ASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWD 1420

Query: 597  DVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            DV   R +MK   VKK+PGFS ++V   VH F+
Sbjct: 1421 DVTDARNMMKLKNVKKDPGFSWIDVKNKVHLFV 1453



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/526 (23%), Positives = 236/526 (44%), Gaps = 37/526 (7%)

Query: 36   LTRYNSLVTSYIKNNKPS-----SALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
            L  +NS++ +Y +    S         ++  +R+ G  +   T+  +LK C       + 
Sbjct: 677  LVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVS 736

Query: 91   KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
            + +HG+A+K G + D +VS AL+ +Y + G +  AR LFD+MP RD V W+ M++ Y   
Sbjct: 737  ETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796

Query: 151  GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
               +EAL            P    +  ++      +DV   +  HA  V+          
Sbjct: 797  SFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVN--SDVSNNRKRHAEQVK---------- 844

Query: 211  IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
                           AYA ++F     +++ +W   ++ ++   +I   +  F  ++   
Sbjct: 845  ---------------AYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRST 889

Query: 271  VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
            +    +T++ ++        L LG+ +HA ++++ F   + ++N+L++MY K   + +A 
Sbjct: 890  IGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAE 949

Query: 331  TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT--- 387
              F      D++ WN +IS+YAQ +   +A   F  +    ++P++ T+  +L  C+   
Sbjct: 950  KTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGD 1009

Query: 388  EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
            E     +G  +H Y  K G+  D  + TAL+D+Y+K G ++ A  L       D+  WNA
Sbjct: 1010 EGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNA 1069

Query: 448  MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
            +M GY       +AL  F  M   G+  + IT    + A      + +GK +    +  L
Sbjct: 1070 IMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIK-L 1128

Query: 508  GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            G    +     ++D+  + G +  A E+   +  RP+ + W  +++
Sbjct: 1129 GFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMIS 1173



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 219/479 (45%), Gaps = 51/479 (10%)

Query: 89   LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
            LGK  H   + +G   D Y++N LI MYS+CGSL SAR +FD+  +RD+V+W++++  Y 
Sbjct: 629  LGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYA 688

Query: 149  R--GGLPEEALE------VMREMRFMDIRPS--EVAMISMVSLFADVADVDLGKAIHACV 198
            +      E  LE      ++RE  F   R +   +  + ++S F  V++   G A+    
Sbjct: 689  QFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKIGF 748

Query: 199  VRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE 258
                   +L + ++ AL+++Y K G +  A+ LF+++ +   V W VM+  Y+  +  +E
Sbjct: 749  -------ELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDE 801

Query: 259  GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
             +R F+        P + + L  +I  G    +   +  HA                 V 
Sbjct: 802  ALRFFSAFHRSGFXP-DFSNLHCVI-GGVNSDVSNNRKRHA---------------EQVK 844

Query: 319  MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
             Y        A  +F   +  ++  WN  ++ +  A  I  A + F  +  S +  + VT
Sbjct: 845  AY--------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVT 896

Query: 379  MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
            +V +LS    A  L++G+ +H  + K      V +  +L++MY+K G V  A + F  + 
Sbjct: 897  LVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSP 956

Query: 439  YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKS 498
              D+  WN M++ Y  +    EA+  F D+ R G+KP+  T   +L ACS      EG+ 
Sbjct: 957  ELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG---DEGEY 1013

Query: 499  -VFDKMVH----GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
                  VH      G++        ++DL  + G +DEA E +       ++  W A++
Sbjct: 1014 FTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEA-EFLLHGKYDFDLASWNAIM 1071



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 103/191 (53%), Gaps = 5/191 (2%)

Query: 291 LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
           L+LGK  HA I+ +G      + N L+ MY KC  + SAR +FD    +D++ WN++++A
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 351 YAQ-----AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
           YAQ        + + F LF  ++        +T+  LL LC  +G +++ + +H Y  K 
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
           G E+D+ +  ALV++Y K G V  A  LF +   RD  +WN M+  Y  +   +EAL FF
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF 806

Query: 466 VDMERSGVKPN 476
               RSG  P+
Sbjct: 807 SAFHRSGFXPD 817



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 76/168 (45%), Gaps = 7/168 (4%)

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L++GK  H  I   G   D  L   L+ MY+KCG +  A ++F ++  RD+  WN+++A 
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686

Query: 452 YGMHGCGE-----EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           Y            E    F  +   G     +T   LL  C  +G V   ++V    V  
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK- 745

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +G    +   G +V++  + GL+ +A  +   MP R + ++W  +L A
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER-DAVLWNVMLKA 792


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  365 bits (936), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 195/540 (36%), Positives = 313/540 (57%), Gaps = 7/540 (1%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           +IH   I  G+ G    +  LIQ Y+  G + SAR +FD+ P   V +W+ MI  Y R G
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--V 209
              EAL +   M    +RP       ++       D+  G+       R   D+  G  V
Sbjct: 85  AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEE----TWRQAVDQGYGDDV 140

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            +  A++++Y+KCG +  A ++F+++ +  +V WT MI+G  +  +  E V ++ +M ++
Sbjct: 141 FVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKK 200

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            V    + +L LI  C  +G  ++G  +H Y++R      + +  +LVDMY K   +  A
Sbjct: 201 RVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELA 260

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             +F  M  K+V+ W+A+IS +AQ      A +L + M+    +P+ V++V +L  C++ 
Sbjct: 261 SCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQV 320

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           G L++GK +H YI ++ L  D +  TA++DMY+KCG ++ A  +F +  +RD   WNA++
Sbjct: 321 GFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAII 379

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           A YG+HG GEEAL  F+ M  + VKP+  TF  LL+A SH+GLV +G+  F  MV+   +
Sbjct: 380 ASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKI 439

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            P  +HY CMVDLL RAG ++EA E+I+SM   P + +W ALL+    H    +GE+AA 
Sbjct: 440 QPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAK 499

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           ++LE+ P + G   L+SN +A A RW++VA VR++MK+  +KK PG+S +EVNG +H F+
Sbjct: 500 KVLELNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYSVMEVNGKLHAFL 559



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 226/420 (53%), Gaps = 5/420 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++ +Y +      AL++Y  M   G   D+ T   +LKAC + L    G+E    A+
Sbjct: 73  WNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAV 132

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G   D +V  A++ +Y++CG +  A  +FD+M  RD+V W+TMI G  + G   EA++
Sbjct: 133 DQGYGDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVD 192

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R+M    +    V M+ ++     +    +G +IH  ++R  KD  + V + T+L+DM
Sbjct: 193 IYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIR--KDIIMDVIVQTSLVDM 250

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G+L  A  +F R+   +V+SW+ +ISG+ +       ++L  +M      P  +++
Sbjct: 251 YAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSL 310

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +S+++ C  VG L+LGK +H YI+R    F    + A++DMY KC  +  ART+FD +  
Sbjct: 311 VSVLLACSQVGFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISF 369

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-W 397
           +D + WNA+I++Y      ++A  LF+ M+ + V+P+  T   LLS  + +G +E G+ W
Sbjct: 370 RDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYW 429

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD-ICMWNAMMAGYGMHG 456
               + +  ++        +VD+ ++ G V  A  L    I    I +W A+++G   HG
Sbjct: 430 FSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHG 489



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 182/354 (51%), Gaps = 13/354 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + +++T   +N +   A++IY  M K   E D   +  +++AC  +  + +G  IHG
Sbjct: 171 LVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHG 230

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + I+  +  D  V  +L+ MY++ G L  A  +F  M  ++V+SWS +I G+ + G    
Sbjct: 231 YMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGN 290

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL+++ +M+    +P  V+++S++   + V  + LGK++H  +VR           +TA+
Sbjct: 291 ALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRL---HFDCVSSTAV 347

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           IDMYSKCG+L++A+ +F++++    +SW  +I+ Y       E + LF +M E NV P  
Sbjct: 348 IDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDH 407

Query: 276 ITILSLIIECGFVGGLQLGK-WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            T  SL+      G ++ G+ W    +     + S      +VD+  +   +  A+ L +
Sbjct: 408 ATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIE 467

Query: 335 GMKSKD-VMIWNAVISAYAQAHCIDKAFELFIHM---KVSKVRPNEVTMVGLLS 384
            M ++  + IW A++S      C++    L   M   KV ++ P++  +  L+S
Sbjct: 468 SMITEPGIAIWVALLSG-----CLNHGKFLIGEMAAKKVLELNPDDPGIYSLVS 516


>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 871

 Score =  365 bits (936), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 216/590 (36%), Positives = 325/590 (55%), Gaps = 18/590 (3%)

Query: 49  NNKPSSALNIYAFMRKN-GSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAY 107
           N+  S  ++ Y   R   GS  D      +LK  +Q+    L  ++H   +K+    D++
Sbjct: 112 NDVHSHVVSFYNLARTTLGSFNDLVVFSILLKTASQLRDIVLTTKLHCNILKSN-AADSF 170

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR--F 165
           V  +L+  YS+CG L  AR +FDE+P+R VVSW++MI  Y +    EE L +   MR  F
Sbjct: 171 VLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGF 230

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
           +D     V   S+V+    +  +  GK +H  V++N    ++   +AT+L++MY KCG++
Sbjct: 231 LDGNVFTVG--SLVTACTKLGCLHQGKWVHGYVIKN--GIEINSYLATSLLNMYVKCGDI 286

Query: 226 AYAKQLFNRLNQNS------VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
             A+ +F+  + ++      +V WT MI GY +       + LF +     + P+ +T+ 
Sbjct: 287 GDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLA 346

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           SL+  C  +  + +GK LH  +++ G +   ++ N+LVDMY KC  I  A  +F     K
Sbjct: 347 SLLSACAQLENIVMGKLLHVLVVKYGLD-DTSLRNSLVDMYAKCGLIPDAHYVFATTVDK 405

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           DV+ WN+VIS YAQ+    +A +LF  M++    P+ VT+VG+LS C   GA ++G  LH
Sbjct: 406 DVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQIGLSLH 465

Query: 400 TYIEKQGL-EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
            +  K GL    + + TAL++ YAKCGD   A  +F     ++   W AM+ G GM G G
Sbjct: 466 GFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDG 525

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
             +L  F DM +  + PN + F  LL ACSH+G+V EG  +FD M   L  VP ++HY C
Sbjct: 526 VGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYAC 585

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLL RAG L EA + I  MP++P + V+GA L    LH N   GE+A  ++LE+ P  
Sbjct: 586 MVDLLARAGNLQEALDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRMLELHPDQ 645

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE--VNGLVH 626
             Y VL+SN+YA   RW  V  VR ++K+  + K PG S VE  VN   H
Sbjct: 646 ACYYVLISNLYASDGRWGMVKEVREMIKQRGLNKVPGVSLVEMDVNNTTH 695



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 111/219 (50%), Gaps = 7/219 (3%)

Query: 20  IIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILK 79
           I   H+ F+ T +   +  +NS+++ Y ++     AL+++  MR      D  T+  +L 
Sbjct: 392 IPDAHYVFA-TTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLS 450

Query: 80  ACAQVLMTHLGKEIHGFAIKNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVV 138
           ACA V    +G  +HGFA+K GL     YV  AL+  Y++CG   SAR +FD M  ++ V
Sbjct: 451 ACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMGEKNAV 510

Query: 139 SWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACV 198
           +W+ MI G    G    +L + R+M   ++ P+EV   ++++  +    V+ G  I   +
Sbjct: 511 TWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFM 570

Query: 199 VRNCKDEKLGVAIA--TALIDMYSKCGNLAYAKQLFNRL 235
              CK+     ++     ++D+ ++ GNL  A    +++
Sbjct: 571 ---CKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKM 606


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 192/598 (32%), Positives = 322/598 (53%), Gaps = 21/598 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + +LV ++ +     +A  ++  +R  G EV+ F + T+LK    +    L   +H 
Sbjct: 127 MVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHS 186

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A K G D +A+V + LI  YS C  +  A ++F+ +  +D V W+ M+  Y     PE 
Sbjct: 187 CAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPEN 246

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A    +    + I  +                    + IH C ++   D +  V    AL
Sbjct: 247 AFRCAQSCSLLAISCAR-------------------QGIHGCAIKTLNDTEPHVG--GAL 285

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+KCG++  A+  F  +  + V+  + MIS Y + N+  +   LF  ++  +V P+E
Sbjct: 286 LDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNE 345

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            ++ S++  C  +  L  GK +H + ++ G E  L + NAL+D Y KC ++ S+  +F  
Sbjct: 346 YSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSS 405

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++  + + WN ++  ++Q+   ++A  +F  M+ +++   +VT   +L  C    ++   
Sbjct: 406 LRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHA 465

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H  IEK     D ++  +L+D YAKCG +  A ++F   + RDI  WNA+++GY +H
Sbjct: 466 GQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALH 525

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G   +AL  F  M +S V+ N ITF+ LL+ C   GLV  G S+FD M    G+ P +EH
Sbjct: 526 GQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEH 585

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y C+V LLGRAG L++A + I  +P  P+ +VW ALL++  +HKN ++G  +A +ILEIE
Sbjct: 586 YTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIE 645

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGM 633
           PQ+    VL+SN+YA A   + VA +R+ M+ I V+K PG S VE+ G +H F  G +
Sbjct: 646 PQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVEIKGEIHAFSVGSV 703



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/501 (28%), Positives = 248/501 (49%), Gaps = 43/501 (8%)

Query: 69  VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG--DAYVSNALIQMYSECGSLVSAR 126
           VD+F     L+ C        G+ +HG  ++ G  G  D + +N L+ MY + G L SAR
Sbjct: 57  VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116

Query: 127 YLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            LFD MP R++VS+ T+++ + + G  E A  + R +R+     ++  + +M+ L   + 
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMD 176

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
              L   +H+C  +   D      + + LID YS C  ++ A+ +FN + +   V WT M
Sbjct: 177 AAGLAGGVHSCAWKLGHDHN--AFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           +S Y   +              EN F    +   L I C   G       +H   ++   
Sbjct: 235 VSCYSEND------------CPENAFRCAQSCSLLAISCARQG-------IHGCAIKTLN 275

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
           +    +  AL+DMY KC +I+ AR  F+ +   DV++ + +IS YAQ++  ++AFELF+ 
Sbjct: 276 DTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLR 335

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           +  S V PNE ++  +L  CT    L+ GK +H +  K G E D+ +  AL+D YAKC D
Sbjct: 336 LMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCND 395

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           ++ + ++FS     +   WN ++ G+   G GEEAL  F +M+ + +    +T+  +L A
Sbjct: 396 MDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRA 455

Query: 487 CS------HAGLV--TEGKSVFDK-MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK 537
           C+      HAG +  +  KS F+   V G  L          +D   + G + +A ++ +
Sbjct: 456 CASTASIRHAGQIHCSIEKSTFNNDTVIGNSL----------IDTYAKCGYIRDALKVFQ 505

Query: 538 SMPLRPNMIVWGALLAASKLH 558
            +  R ++I W A+++   LH
Sbjct: 506 HLMER-DIISWNAIISGYALH 525



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/396 (22%), Positives = 176/396 (44%), Gaps = 38/396 (9%)

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
           D   G+A+H  VVR     +L +  A  L++MY K G LA A++LF+R+ + ++VS+  +
Sbjct: 74  DARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTL 133

Query: 247 ISGYIRCNEINEGVRLFAEM------IEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           +  + +  +      LF  +      + + V  + + +   +   G  GG+    W    
Sbjct: 134 VQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAW---- 189

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
             + G + +  + + L+D Y  C  +  A  +F+G+  KD ++W A++S Y++  C + A
Sbjct: 190 --KLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENA 247

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSL-CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVD 419
           F                    LL++ C   G       +H    K   + +  +  AL+D
Sbjct: 248 FRC-------------AQSCSLLAISCARQG-------IHGCAIKTLNDTEPHVGGALLD 287

Query: 420 MYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGIT 479
           MYAKCGD+  A   F    Y D+ + + M++ Y      E+A   F+ + RS V PN  +
Sbjct: 288 MYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYS 347

Query: 480 FIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM 539
              +L AC++   +  GK + +  +  +G    +     ++D   +   +D + ++  S+
Sbjct: 348 LSSVLQACTNMVQLDFGKQIHNHAIK-IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSL 406

Query: 540 PLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
               N + W  ++          +GE A +   E++
Sbjct: 407 R-DANEVSWNTIVVG---FSQSGLGEEALSVFCEMQ 438


>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1347

 Score =  365 bits (936), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 195/599 (32%), Positives = 336/599 (56%), Gaps = 4/599 (0%)

Query: 33   INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
            +  L  +++LV+S ++N +   AL ++  M  +G E D  T+ ++++ CA++    + + 
Sbjct: 722  VRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARS 781

Query: 93   IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
            +HG   +   D D  + N+L+ MYS+CG L+S+  +F+++  ++ VSW+ MI  Y+RG  
Sbjct: 782  VHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEF 841

Query: 153  PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
             E+AL    EM    I P+ V + S++S       +  GK++H   +R   D     +++
Sbjct: 842  SEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYE-SLS 900

Query: 213  TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
             AL+++Y++CG L   + + + +   ++V W   IS Y     + E + LF +M+   + 
Sbjct: 901  PALVELYAECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIK 960

Query: 273  PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
            P   T+ S+I  C   G ++LGK +H +++R        + N+++DMY K   +  A T+
Sbjct: 961  PDSFTLASIISACENTGLVRLGKQIHGHVIRTDVSDEF-VQNSVIDMYSKSGFVNLACTV 1019

Query: 333  FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
            FD +K + ++ WN+++  ++Q     +A  LF +M  S +  N+VT + ++  C+  G+L
Sbjct: 1020 FDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGSL 1079

Query: 393  EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
            E G+W+H  +   G++ D+   TAL+DMYAKCGD+N A  +F     R I  W++M+  Y
Sbjct: 1080 EKGRWVHHKLIVCGIK-DLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINAY 1138

Query: 453  GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
            GMHG    A+  F  M  SG KPN + F+ +L+AC H+G V EGK  F+ M    G+ P 
Sbjct: 1139 GMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KLFGVSPN 1197

Query: 513  IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
             EH+ C +DLL R+G L EA+  IK MP   +  VWG+L+   ++H+   + +     I 
Sbjct: 1198 SEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDIS 1257

Query: 573  EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            +I   + GY  L+SNIYA    W +   +R  MK + +KK PG+S++E++  V +F  G
Sbjct: 1258 DIVTDDTGYYTLLSNIYAEEGEWEEFRRMRSAMKSLNLKKVPGYSAIEIDKKVFRFGAG 1316



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 288/508 (56%), Gaps = 10/508 (1%)

Query: 54   SALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL--GKEIHGFAIKNGLDGDAYVSNA 111
            +A+++Y  +    +++  F  P++L+ACA     HL  G+++HG  IK+G+D DA +  +
Sbjct: 641  AAIDLYHRLVSEKTQISKFVFPSVLRACAGS-REHLSVGRKVHGRIIKSGVDDDAVIETS 699

Query: 112  LIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPS 171
            L+ MY + G+L  A  +FD MP RD+V+WST++          +AL + + M    + P 
Sbjct: 700  LLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPD 759

Query: 172  EVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQL 231
             V MIS+V   A++  + + +++H  + R   D      +  +L+ MYSKCG+L  ++++
Sbjct: 760  AVTMISVVEGCAELGCLRIARSVHGQITRKMFD--FDETLCNSLLTMYSKCGDLLSSEKI 817

Query: 232  FNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL 291
            F ++ + + VSWT MIS Y R     + +R F+EM++  + P+ +T+ S++  CG  G +
Sbjct: 818  FEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMLKSGIEPNLVTLYSILSSCGLNGLI 877

Query: 292  QLGKWLHAYILRNGFEFSL-AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
            + GK +H + +R   + +  +++ ALV++Y +C  +    T+   +  +++++WN+ IS 
Sbjct: 878  REGKSVHGFAIRRELDPNYESLSPALVELYAECGRLGDCETILHVVGDRNIVLWNSHISL 937

Query: 351  YAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
            YA    + +A  LF  M   +++P+  T+  ++S C   G + +GK +H ++ +  +  D
Sbjct: 938  YAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIRTDVS-D 996

Query: 411  VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
              ++ +++DMY+K G VN A  +F +  +R I  WN+M+ G+  +G   EA+  F  M  
Sbjct: 997  EFVQNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYH 1056

Query: 471  SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
            S ++ N +TF+ ++ ACS  G + +G+ V  K++  +  +  +     ++D+  + G L+
Sbjct: 1057 SCLEINKVTFLAVIQACSSIGSLEKGRWVHHKLI--VCGIKDLFTDTALIDMYAKCGDLN 1114

Query: 531  EAHEMIKSMPLRPNMIVWGALLAASKLH 558
             A  + ++M  R +++ W +++ A  +H
Sbjct: 1115 TAETVFRAMSNR-SIVSWSSMINAYGMH 1141



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 196/391 (50%), Gaps = 13/391 (3%)

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
           +D R   + M   + LF   + + L   +HA ++   +  +  + + T LI+ Y+  G+ 
Sbjct: 550 VDPRTKYLKMTQYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPV-TKLIESYAFMGSP 608

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
             ++ +F          + V+I   + C+ ++  + L+  ++ E    S+    S++  C
Sbjct: 609 DSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSEKTQISKFVFPSVLRAC 668

Query: 286 -GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
            G    L +G+ +H  I+++G +    +  +L+ MYG+   +  A  +FDGM  +D++ W
Sbjct: 669 AGSREHLSVGRKVHGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAW 728

Query: 345 NAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK 404
           + ++S+  +   + KA  +F  M    V P+ VTM+ ++  C E G L + + +H  I +
Sbjct: 729 STLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITR 788

Query: 405 QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIF 464
           +  + D  L  +L+ MY+KCGD+  + ++F +   ++   W AM++ Y      E+AL  
Sbjct: 789 KMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRS 848

Query: 465 FVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG----LVPKIEHYG-CM 519
           F +M +SG++PN +T   +L++C   GL+ EGKS     VHG      L P  E     +
Sbjct: 849 FSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKS-----VHGFAIRRELDPNYESLSPAL 903

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           V+L    G L +   ++  +  R N+++W +
Sbjct: 904 VELYAECGRLGDCETILHVVGDR-NIVLWNS 933


>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 614

 Score =  364 bits (935), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 197/506 (38%), Positives = 293/506 (57%), Gaps = 12/506 (2%)

Query: 133 PNRDVVSWSTMIRG----YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV 188
           P+ +  +++ MIR     +H   L   AL +   M  + + P            A++A +
Sbjct: 82  PHPNDYAFNIMIRALTTTWHNYPL---ALSLFHRMMSLSLTPDNFTFPFFFLSCANLASL 138

Query: 189 DLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
               A H+ + +           A +LI  Y++CG +A A+++F+ +     VSW  MI+
Sbjct: 139 SHACAAHSLLFKLALHSD--PHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIA 196

Query: 249 GYIRCNEINEGVRLFAEMIEENVF-PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           GY +     E V +F EM   + F P E++++SL+  CG +G L+LG+W+  +++  G  
Sbjct: 197 GYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMT 256

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
            +  + +AL+ MY KC E+ SAR +FDGM ++DV+ WNAVIS YAQ    D+A  LF  M
Sbjct: 257 LNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGM 316

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           K   V  N++T+  +LS C   GAL++GK +  Y  ++G + D+ + TAL+DMYAK G +
Sbjct: 317 KEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSL 376

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM--ERSGVKPNGITFIGLLN 485
           + A R+F +   ++   WNAM++    HG  +EAL  F  M  E  G +PN ITF+GLL+
Sbjct: 377 DNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLS 436

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
           AC HAGLV EG  +FD M    GLVPKIEHY CMVDLL RAG L EA ++I+ MP +P+ 
Sbjct: 437 ACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDK 496

Query: 546 IVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVM 605
           +  GALL A +  KN  +GE     ILE++P N G  ++ S IYA  N W D A +R +M
Sbjct: 497 VTLGALLGACRSKKNVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLM 556

Query: 606 KEIRVKKEPGFSSVEVNGLVHKFIRG 631
           ++  + K PG S +EV   +H+F  G
Sbjct: 557 RQKGITKTPGCSWIEVENHLHEFHAG 582



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/383 (34%), Positives = 211/383 (55%), Gaps = 6/383 (1%)

Query: 55  ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
           AL+++  M       DNFT P    +CA +         H    K  L  D + +++LI 
Sbjct: 106 ALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLIT 165

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSEV 173
            Y+ CG + SAR +FDE+P+RD VSW++MI GY + G   EA+EV REM   D   P E+
Sbjct: 166 AYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEM 225

Query: 174 AMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFN 233
           +++S++    ++ D++LG+ +   VV   +   L   I +ALI MY+KCG L  A+++F+
Sbjct: 226 SLVSLLGACGELGDLELGRWVEGFVVE--RGMTLNSYIGSALISMYAKCGELESARRIFD 283

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL 293
            +    V++W  +ISGY +    +E + LF  M E+ V  ++IT+ +++  C  +G L L
Sbjct: 284 GMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIGALDL 343

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           GK +  Y  + GF+  + +A AL+DMY K   + +A+ +F  M  K+   WNA+ISA A 
Sbjct: 344 GKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAA 403

Query: 354 AHCIDKAFELFIHM--KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVD 410
                +A  LF HM  +    RPN++T VGLLS C  AG ++ G  L   +    GL   
Sbjct: 404 HGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEGYRLFDMMSTLFGLVPK 463

Query: 411 VILKTALVDMYAKCGDVNGAYRL 433
           +   + +VD+ A+ G +  A+ L
Sbjct: 464 IEHYSCMVDLLARAGHLYEAWDL 486



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 206/410 (50%), Gaps = 57/410 (13%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFM-RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +NS++  Y K      A+ ++  M R++G E D  ++ ++L AC ++    LG+ + GF 
Sbjct: 191 WNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFV 250

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           ++ G+  ++Y+ +ALI MY++CG L SAR +FD M  RDV++W+ +I GY + G+ +EA+
Sbjct: 251 VERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAI 310

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            +   M+   +  +++ + +++S  A +  +DLGK I     +  +  +  + +ATALID
Sbjct: 311 LLFHGMKEDCVTANKITLTAVLSACATIGALDLGKQIDEYASQ--RGFQHDIFVATALID 368

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE--NVFPSE 275
           MY+K G+L  A+++F  + Q +  SW  MIS      +  E + LF  M +E     P++
Sbjct: 369 MYAKSGSLDNAQRVFKDMPQKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPND 428

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           IT + L+  C           +HA ++  G+         L DM           TLF G
Sbjct: 429 ITFVGLLSAC-----------VHAGLVDEGYR--------LFDMMS---------TLF-G 459

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +  K +  ++ ++   A+A  + +A++L   M     +P++VT+  LL  C     +++G
Sbjct: 460 LVPK-IEHYSCMVDLLARAGHLYEAWDLIRKM---PEKPDKVTLGALLGACRSKKNVDIG 515

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
           + +   I    LEVD                 N    + S  IY ++ MW
Sbjct: 516 ERVMRMI----LEVD---------------PSNSGNYIISSKIYANLNMW 546


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  364 bits (935), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 197/565 (34%), Positives = 326/565 (57%), Gaps = 5/565 (0%)

Query: 77  ILKACAQVLMTHLGKEIHG-FAIKNGLDGDAYVS-NALIQMYSECGSLVSARYLFDEMPN 134
           +LK  A       GK IH    I N    D  V  N+LI +Y++C  ++ AR LFD M  
Sbjct: 31  LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRK 90

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKA 193
           R+VVSW  ++ GY   GL  E L + + M  +D +RP+E    +++S  +D   V  G  
Sbjct: 91  RNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQ 150

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
            H   +++         +  ALI MYS+  ++  A  ++  +    V S+ ++I+G +  
Sbjct: 151 CHGYALKS--GLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLEN 208

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
              +E + +   M++E +    +T ++    C  +  L+LG  +H  + R G E+   ++
Sbjct: 209 GYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVS 268

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           +A++DMYGKC  I +AR +F+ +++K+V+ W A+++AY+Q  C ++A   F  M+V  + 
Sbjct: 269 SAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLL 328

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           PNE T   LL+ C    AL  GK LHT I+K G E  +I+  AL++MY+K G +  A+++
Sbjct: 329 PNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKV 388

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F E I RD   W+AM+ G   HG G EAL+ F +M  +   P+ +TF+G+L+AC+H G V
Sbjct: 389 FLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGSV 448

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            EG    ++++   G+ P +EHY C+V LL +AG LDEA   +KS P++ +++ W  LL+
Sbjct: 449 QEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLLS 508

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           A  +H+N  +G+  A  +L+++P + G  +L+SN+YA A RW+ V  +R++M+E  VKKE
Sbjct: 509 ACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKKE 568

Query: 614 PGFSSVEVNGLVHKFIRGGMVNWKS 638
           PG S +E+   +H F+  G  + +S
Sbjct: 569 PGASWIEIRNSIHVFVSEGKTHPES 593



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 147/510 (28%), Positives = 247/510 (48%), Gaps = 44/510 (8%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYA 60
           +K+     NL+  +  HAH+I T+ + +  NI+    + NSL+  Y K ++   A  ++ 
Sbjct: 32  LKVSADTKNLKFGKMIHAHLIITN-QATKDNIV----QVNSLINLYAKCDQIMVARILFD 86

Query: 61  FMRK---------------NG-----------------SEVDNFTIPTILKACAQVLMTH 88
            MRK               NG                    + +   TI+ +C+      
Sbjct: 87  GMRKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVV 146

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
            G + HG+A+K+GL    YV NALI MYS    +  A  ++ E+P  DV S++ +I G  
Sbjct: 147 EGWQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLL 206

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
             G P EALEV+  M    I    V  ++   L + + D+ LG  +H  + R     +  
Sbjct: 207 ENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRT--GAEYD 264

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
             +++A+IDMY KCGN+  A+++FNRL   +VVSWT +++ Y +     E +  F EM  
Sbjct: 265 SFVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEV 324

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
           + + P+E T   L+  C  +  L  GK LH  I ++GFE  + + NAL++MY K   I +
Sbjct: 325 DGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEA 384

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           A  +F  M  +D + W+A+I   +      +A  +F  M  +K  P+ VT VG+LS C  
Sbjct: 385 AHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAH 444

Query: 389 AGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWN 446
            G+++ G  +L+  +++ G+E  V   T +V +  K G ++ A     S  +  D+  W 
Sbjct: 445 LGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWR 504

Query: 447 AMMAGYGMH---GCGEEALIFFVDMERSGV 473
            +++   +H   G G++     + M+   V
Sbjct: 505 TLLSACHVHQNYGLGKKVAELVLQMDPGDV 534



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 199/384 (51%), Gaps = 3/384 (0%)

Query: 176 ISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL 235
           I ++ + AD  ++  GK IHA ++   +  K  +    +LI++Y+KC  +  A+ LF+ +
Sbjct: 29  IQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGM 88

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF-PSEITILSLIIECGFVGGLQLG 294
            + +VVSW  +++GY     + E +RLF  MI  +   P+E    ++I  C   G +  G
Sbjct: 89  RKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEG 148

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
              H Y L++G  F   + NAL+ MY +  +++ A +++  +   DV  +N +I+   + 
Sbjct: 149 WQCHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLEN 208

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
               +A E+   M    +  + VT V    LC+    L +G  +H  + + G E D  + 
Sbjct: 209 GYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVS 268

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
           +A++DMY KCG++  A ++F+    +++  W A++A Y  +GC EEAL FF +ME  G+ 
Sbjct: 269 SAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLL 328

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
           PN  TF  LLN+C+    +  GK +  + +   G    I     ++++  ++G ++ AH+
Sbjct: 329 PNEYTFAVLLNSCAGISALGHGKLLHTR-IKKSGFEDHIIVGNALINMYSKSGSIEAAHK 387

Query: 535 MIKSMPLRPNMIVWGALLAASKLH 558
           +   M  R + I W A++     H
Sbjct: 388 VFLEMICR-DSITWSAMICGLSHH 410


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  364 bits (935), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 211/665 (31%), Positives = 348/665 (52%), Gaps = 45/665 (6%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTNIINPLTR-------------------------YNSLV 43
           ++E  +Q HAH+ K  +      + N L                           +NSL+
Sbjct: 25  DMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLI 84

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH---LGKEIHGFAIKN 100
           +S     K   AL  +  M     E  +FT+ +++ AC+ + M     +GK++H + ++ 
Sbjct: 85  SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK 144

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G + ++++ N L+ MY + G L S++ L      RD+V+W+T++    +     EALE +
Sbjct: 145 G-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYL 203

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK-DEKLGVAIATALIDMY 219
           REM    + P E  + S++   + +  +  GK +HA  ++N   DE     + +AL+DMY
Sbjct: 204 REMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN--SFVGSALVDMY 261

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPSEITI 278
             C  +   +++F+ +    +  W  MI+GY +     E + LF  M E   +  +  T+
Sbjct: 262 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 321

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
             ++  C   G     + +H ++++ G +    + N L+DMY +  +I  A  +F  M+ 
Sbjct: 322 AGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED 381

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHM-----KVSK------VRPNEVTMVGLLSLCT 387
           +D++ WN +I+ Y  +   + A  L   M     KVSK      ++PN +T++ +L  C 
Sbjct: 382 RDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA 441

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
              AL  GK +H Y  K  L  DV + +ALVDMYAKCG +  + ++F +   +++  WN 
Sbjct: 442 ALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNV 501

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           ++  YGMHG G+EA+     M   GVKPN +TFI +  ACSH+G+V EG  +F  M    
Sbjct: 502 IIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDY 561

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI-VWGALLAASKLHKNPSMGEI 566
           G+ P  +HY C+VDLLGRAG + EA++++  MP   N    W +LL AS++H N  +GEI
Sbjct: 562 GVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEI 621

Query: 567 AATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVH 626
           AA  ++++EP    + VL++NIY+ A  W+    VRR MKE  V+KEPG S +E    VH
Sbjct: 622 AAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVH 681

Query: 627 KFIRG 631
           KF+ G
Sbjct: 682 KFVAG 686



 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 157/512 (30%), Positives = 266/512 (51%), Gaps = 22/512 (4%)

Query: 66  GSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAY-VSNALIQMYSECGSLVS 124
           G + DN+  P +LKA A +    LGK+IH    K G   D+  V+N L+ +Y +CG   +
Sbjct: 5   GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 64

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
              +FD +  R+ VSW+++I         E ALE  R M   ++ PS   ++S+V+  ++
Sbjct: 65  VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 124

Query: 185 VADVD---LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
           +   +   +GK +HA  +R     +L   I   L+ MY K G LA +K L        +V
Sbjct: 125 LPMPEGLMMGKQVHAYGLRK---GELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 181

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           +W  ++S   +  ++ E +    EM+ E V P E TI S++  C  +  L+ GK LHAY 
Sbjct: 182 TWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYA 241

Query: 302 LRNG-FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           L+NG  + +  + +ALVDMY  C+++ S R +FDGM  + + +WNA+I+ Y+Q     +A
Sbjct: 242 LKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEA 301

Query: 361 FELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVD 419
             LFI M+ S  +  N  TM G++  C  +GA    + +H ++ K+GL+ D  ++  L+D
Sbjct: 302 LLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMD 361

Query: 420 MYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME---------- 469
           MY++ G ++ A R+F +   RD+  WN M+ GY      E+AL+    M+          
Sbjct: 362 MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA 421

Query: 470 -RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
            R  +KPN IT + +L +C+    + +GK +    +    L   +     +VD+  + G 
Sbjct: 422 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVDMYAKCGC 480

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
           L  + ++   +P + N+I W  ++ A  +H N
Sbjct: 481 LQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN 511



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 211/403 (52%), Gaps = 21/403 (5%)

Query: 163 MRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG-----VAIATALID 217
           M  + I+P   A  +++   AD+ D++LGK IHA V       K G     V +A  L++
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY------KFGYGVDSVTVANTLVN 54

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           +Y KCG+     ++F+R+++ + VSW  +IS      +    +  F  M++ENV PS  T
Sbjct: 55  LYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFT 114

Query: 278 ILSLIIECGFVG---GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           ++S++  C  +    GL +GK +HAY LR G E +  + N LV MYGK  ++ S++ L  
Sbjct: 115 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLG 173

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
               +D++ WN V+S+  Q   + +A E    M +  V P+E T+  +L  C+    L  
Sbjct: 174 SFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRT 233

Query: 395 GKWLHTYIEKQG-LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           GK LH Y  K G L+ +  + +ALVDMY  C  V    R+F     R I +WNAM+AGY 
Sbjct: 234 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 293

Query: 454 MHGCGEEALIFFVDMERS-GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVP 511
            +   +EAL+ F+ ME S G+  N  T  G++ AC  +G  +  +++   +V  GL    
Sbjct: 294 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 353

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            +++   ++D+  R G +D A  +   M  R +++ W  ++  
Sbjct: 354 FVQN--TLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITG 393


>gi|226505108|ref|NP_001141927.1| uncharacterized protein LOC100274076 [Zea mays]
 gi|194706472|gb|ACF87320.1| unknown [Zea mays]
 gi|413938142|gb|AFW72693.1| hypothetical protein ZEAMMB73_533387 [Zea mays]
          Length = 583

 Score =  364 bits (935), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 214/574 (37%), Positives = 315/574 (54%), Gaps = 17/574 (2%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           N+L+ SY        AL +Y+ MR      D+ T     KACA + +   G+ +HG A+ 
Sbjct: 11  NTLLRSYSGLGFHRQALALYSQMR----HFDHLTFTFAAKACAGLRLRRHGRAVHGRALA 66

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
            G   DAYV NA++ MY  C  + +A  +F  +P+R  VSW+T+I G  + G  E ALEV
Sbjct: 67  AGFGSDAYVQNAIVSMYMRCRDVAAAEAVFVALPSRTTVSWNTVITGCVKDGRAERALEV 126

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLG--VAIATALI 216
              M    +     +++S++   A   D+  G+A+H   VVR      LG  VA+  ALI
Sbjct: 127 FETMVDRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAVVRG-----LGKYVAVKNALI 181

Query: 217 DMYSKCGNLAYAKQLFNRLNQN-SVVSWTVMISGYIRCNEINEGVRLFAEM-IEENVFPS 274
           DMY KCG+L  A+++F+  + +  VVSWTVMI  Y+  +  ++   L +EM +     P+
Sbjct: 182 DMYGKCGSLEDARRVFDEDSYDKDVVSWTVMIGAYVLNDHASKAFALGSEMLVSSEAQPN 241

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            +T+  L+  C  +   +  K  HA  +R G    + +  ALVD Y KC  +     + +
Sbjct: 242 AVTMAHLLSACASLLSGKHAKCTHALCIRLGLGSDIVVETALVDCYAKCGYMGVIDMVVE 301

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
              S+    WNA IS Y Q     KA  LF  M    VRP+  TM  ++    E+  L  
Sbjct: 302 -KGSRRTETWNAAISGYTQRDQGKKALALFKRMLAESVRPDSATMASVIPAYAESADLVQ 360

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
              +H  +  +G  V   + T L+D+YAK GD+  A+ LF     +D+  W  ++AGYGM
Sbjct: 361 ANNIHCCLLVRGCLVSTDIATGLIDLYAKAGDLGVAWELFQCLPEKDVVAWTTVIAGYGM 420

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL-GLVPKI 513
           HG  + A++ +  M   GV PN +T   LL++CSHAG+V EG  +F+ M HG+ GL+P  
Sbjct: 421 HGHAQTAMLLYSRMVELGVMPNTVTIASLLHSCSHAGMVDEGLRLFNDM-HGVHGLMPNA 479

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHY C+VD+LGRAG ++EA+  I+ MP  P + VW +LL A  LH+N   GE+AA  + E
Sbjct: 480 EHYLCLVDMLGRAGRIEEAYRRIEDMPFEPTVSVWSSLLGACVLHENVEFGEVAAKHLFE 539

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
           +EP N G  VL+  +YA A RW+DV  +RRVM+E
Sbjct: 540 LEPDNVGNYVLLGKVYAAAERWSDVQHLRRVMEE 573



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 205/425 (48%), Gaps = 15/425 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++T  +K+ +   AL ++  M   G  +D  ++ ++L ACAQ    H G+ +H  A+
Sbjct: 107 WNTVITGCVKDGRAERALEVFETMVDRGVCIDRASVVSVLPACAQARDLHTGRAVHRLAV 166

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMIRGYHRGGLPEEAL 157
             GL     V NALI MY +CGSL  AR +FDE   ++DVVSW+ MI  Y       +A 
Sbjct: 167 VRGLGKYVAVKNALIDMYGKCGSLEDARRVFDEDSYDKDVVSWTVMIGAYVLNDHASKAF 226

Query: 158 EVMREMRF-MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIA 212
            +  EM    + +P+ V M  ++S  A +      K  HA  +R      LG    + + 
Sbjct: 227 ALGSEMLVSSEAQPNAVTMAHLLSACASLLSGKHAKCTHALCIR------LGLGSDIVVE 280

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           TAL+D Y+KCG +     +  + ++ +  +W   ISGY + ++  + + LF  M+ E+V 
Sbjct: 281 TALVDCYAKCGYMGVIDMVVEKGSRRT-ETWNAAISGYTQRDQGKKALALFKRMLAESVR 339

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P   T+ S+I        L     +H  +L  G   S  +A  L+D+Y K  ++  A  L
Sbjct: 340 PDSATMASVIPAYAESADLVQANNIHCCLLVRGCLVSTDIATGLIDLYAKAGDLGVAWEL 399

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F  +  KDV+ W  VI+ Y        A  L+  M    V PN VT+  LL  C+ AG +
Sbjct: 400 FQCLPEKDVVAWTTVIAGYGMHGHAQTAMLLYSRMVELGVMPNTVTIASLLHSCSHAGMV 459

Query: 393 EMGKWLHTYIEK-QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMA 450
           + G  L   +    GL  +      LVDM  + G +  AYR   +  +   + +W++++ 
Sbjct: 460 DEGLRLFNDMHGVHGLMPNAEHYLCLVDMLGRAGRIEEAYRRIEDMPFEPTVSVWSSLLG 519

Query: 451 GYGMH 455
              +H
Sbjct: 520 ACVLH 524


>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Vitis vinifera]
          Length = 742

 Score =  364 bits (934), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 219/660 (33%), Positives = 354/660 (53%), Gaps = 48/660 (7%)

Query: 8   LNLEQTRQCHAHIIKTHFKFSYTNIINPLTRY-NSLVTSYIKNNKPSSALNIYAFMRKNG 66
           L +   +  HA ++K  F        + LT   NS++  Y+K     SAL ++  MR   
Sbjct: 63  LPVRHGKSIHASLLKQGF--------DSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRD 114

Query: 67  S-------------------------------EVDNFTIPTILKACAQVLMTHLGKEIHG 95
           S                               E +  T+   + AC  +     G ++HG
Sbjct: 115 SVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHG 174

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + I++G      V N+L+ MY++   +  A  LFDEM  RDV+SWS MI GY + G  + 
Sbjct: 175 YIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKM 233

Query: 156 ALEVMREMRF-MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           AL++  EM     I    + M+S++   A+  D+ +G+++H  V+  C+     + +  +
Sbjct: 234 ALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVI--CRGLDYDLFVGNS 291

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           +IDMYSKC +   A + FN +   + VSW  +ISG +R  + +E + LF  M +      
Sbjct: 292 IIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRAD 351

Query: 275 EITILSLIIECG-FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           E+T+++L+  C  FV   Q  K++H+ ++R G+E +  + N+L+D Y KC  I  A  LF
Sbjct: 352 EVTLVNLLQSCKYFVDPFQC-KFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLF 410

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           D +K+KD + W+A+I+ +      D+A  LF  M  ++ +PN VT++ LL   + +  L+
Sbjct: 411 DRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEAFSVSADLK 470

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
             KW H    ++GL  +V + TA++DMYAKCG++  + + F +   ++I  W AM+A  G
Sbjct: 471 RSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLSRKAFDQIPEKNIVSWGAMIAACG 530

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
           M+G   +AL    +M+  G+KPN +T + +L+ACSH GLV EG S F+ MV   G+ P +
Sbjct: 531 MNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHGGLVEEGLSFFENMVQDHGVEPGL 590

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMP--LRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
           EHY CMVD+L RAG L+ A  +I+ MP  +R    +WGALL+A +   N  +G  AA ++
Sbjct: 591 EHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLWGALLSACRSSGNSRLGAGAAFRV 650

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           LE+EPQ+     L S++YA +  W D A +R ++K   V+   G+S V V     +F+ G
Sbjct: 651 LELEPQSSAGYFLASSMYAASGLWADAARMRWLVKARGVRVVAGYSLVHVEDKAWRFVAG 710



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 144/506 (28%), Positives = 273/506 (53%), Gaps = 16/506 (3%)

Query: 55  ALNIYAFMRKNGSEVDNFT-IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALI 113
           A + Y  M+K G+++ + T + +ILKAC+ + + H GK IH   +K G D      N+++
Sbjct: 33  ACSRYHQMKKAGAQLTDPTLVHSILKACSSLPVRH-GKSIHASLLKQGFDSLTSTGNSVL 91

Query: 114 QMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEV 173
             Y + G+L SA ++FD M +RD VSW+ MI G+   G  ++ L   R+ R +   P+  
Sbjct: 92  DFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVS 151

Query: 174 AMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFN 233
            ++  +     +  ++ G  +H  ++R+   +    ++  +L+ MY+   ++  A++LF+
Sbjct: 152 TLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDI--PSVQNSLLSMYAD-NDMERAEELFD 208

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPSEITILSLIIECGFVGGLQ 292
            + +  V+SW+VMI GY++  E    ++LF EM    ++    IT++S++  C   G + 
Sbjct: 209 EMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDIS 268

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
           +G+ +H  ++  G ++ L + N+++DMY KC +  SA   F+ M  ++ + WN++IS   
Sbjct: 269 MGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLV 328

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
           +     +A  LF  M  +  R +EVT+V LL  C         K++H+ + + G E++  
Sbjct: 329 RTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEF 388

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           +  +L+D Y+KC  +  A++LF     +D   W+AM+AG+   G  +EA+  F +M ++ 
Sbjct: 389 VINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQ 448

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGL 528
            KPNG+T + LL A S +  +        K  HG+    GL  ++     ++D+  + G 
Sbjct: 449 EKPNGVTILSLLEAFSVSADLKR-----SKWAHGIAIRRGLAAEVAVGTAILDMYAKCGE 503

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAA 554
           +  + +    +P + N++ WGA++AA
Sbjct: 504 IGLSRKAFDQIPEK-NIVSWGAMIAA 528



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 2/139 (1%)

Query: 359 KAFELFIHMKVSKVRPNEVTMV-GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
           +A   +  MK +  +  + T+V  +L  C+    +  GK +H  + KQG +       ++
Sbjct: 32  EACSRYHQMKKAGAQLTDPTLVHSILKACSSL-PVRHGKSIHASLLKQGFDSLTSTGNSV 90

Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
           +D Y K G ++ A  +F     RD   WN M+ G+   G  ++ L +F        +PN 
Sbjct: 91  LDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNV 150

Query: 478 ITFIGLLNACSHAGLVTEG 496
            T +  ++AC   G + EG
Sbjct: 151 STLVLAIHACRSLGAMEEG 169


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  364 bits (934), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 198/593 (33%), Positives = 330/593 (55%), Gaps = 8/593 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + SL+T        S  + ++  MR  G   + FT  ++L A A      LG+ +H  ++
Sbjct: 169 WTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSV 228

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G     +V N+L+ MY++CG +  A+ +F+ M  RD+VSW+T++ G        EAL+
Sbjct: 229 KFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQ 288

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  E R    + ++    +++ L A++  + L + +H+CV+++     L   + TAL D 
Sbjct: 289 LFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKH--GFHLTGNVMTALADA 346

Query: 219 YSKCGNLAYAKQLFN-RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           YSKCG LA A  +F+      +VVSWT +ISG I+  +I   V LF+ M E+ V P+E T
Sbjct: 347 YSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFT 406

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             +++     +    L   +HA +++  ++   ++  AL+  Y K      A ++F  ++
Sbjct: 407 YSAMLKASLSI----LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIE 462

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT-EAGALEMGK 396
            KDV+ W+A++S +AQA   + A  LF  M +  ++PNE T+  ++  C   +  ++ G+
Sbjct: 463 QKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGR 522

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
             H    K      + + +ALV MY++ G+++ A  +F     RD+  WN+M++GY  HG
Sbjct: 523 QFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHG 582

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
              +A+  F  ME SG++ +G+TF+ ++  C+H GLV EG+  FD MV    + P +EHY
Sbjct: 583 YSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHY 642

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            CMVDL  RAG LDE   +I+ MP     +VW  LL A ++HKN  +G+ +A ++L +EP
Sbjct: 643 ACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEP 702

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            +    VL+SNIYA A +W +   VR++M   +VKKE G S +++   VH FI
Sbjct: 703 HDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFI 755



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 260/529 (49%), Gaps = 25/529 (4%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           N ++  Y +       L+ ++  R+ G  VD+ T+  +LKAC  V    LG+++H   +K
Sbjct: 68  NRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVK 127

Query: 100 NGLD-GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            G D G+     +L+ MY +CGS+     +F+ MP ++VV+W++++ G     +  E + 
Sbjct: 128 CGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMA 187

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALID 217
           +   MR   I P+     S++S  A    +DLG+ +HA  V+  C+     V +  +L++
Sbjct: 188 LFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSS---VFVCNSLMN 244

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-EGVRLFAEMIEENVFPSEI 276
           MY+KCG +  AK +FN +    +VSW  +++G ++ NE   E ++LF E        ++ 
Sbjct: 245 MYAKCGLVEDAKSVFNWMETRDMVSWNTLMAG-LQLNECELEALQLFHESRATMGKMTQS 303

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD-G 335
           T  ++I  C  +  L L + LH+ +L++GF  +  +  AL D Y KC E+  A  +F   
Sbjct: 304 TYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMT 363

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
             S++V+ W A+IS   Q   I  A  LF  M+  +V PNE T   +L    +A    + 
Sbjct: 364 TGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAML----KASLSILP 419

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H  + K   +    + TAL+  Y+K G    A  +F     +D+  W+AM++ +   
Sbjct: 420 PQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQA 479

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACS--HAGLVTEGKSVFDKMVHGLGLVPKI 513
           G  E A   F  M   G+KPN  T   +++AC+   AG V +G+       H + +  + 
Sbjct: 480 GDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAG-VDQGRQ-----FHAISIKYRY 533

Query: 514 EHYGC----MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
               C    +V +  R G +D A  + +    R +++ W ++++    H
Sbjct: 534 HDAICVSSALVSMYSRKGNIDSAQIVFERQTDR-DLVSWNSMISGYAQH 581



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 214/435 (49%), Gaps = 17/435 (3%)

Query: 125 ARYLFDEMPNRDV-VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFA 183
           ARY  DE+P RD  V  + ++  Y R G+  E L+     R   +      +  ++    
Sbjct: 51  ARYPLDEIPRRDAAVGANRVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACR 110

Query: 184 DVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSW 243
            V D  LG+ +H C+   C  ++  V+  T+L+DMY KCG++    ++F  + + +VV+W
Sbjct: 111 SVPDRVLGEQLH-CLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTW 169

Query: 244 TVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
           T +++G       +E + LF  M  E ++P+  T  S++      G L LG+ +HA  ++
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
            G   S+ + N+L++MY KC  +  A+++F+ M+++D++ WN +++      C  +A +L
Sbjct: 230 FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQL 289

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F   + +  +  + T   ++ LC     L + + LH+ + K G  +   + TAL D Y+K
Sbjct: 290 FHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSK 349

Query: 424 CGDVNGAYRLFSEAI-YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
           CG++  A  +FS     R++  W A+++G   +G    A++ F  M    V PN  T+  
Sbjct: 350 CGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSA 409

Query: 483 LLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL----GRAGLLDEAHEMIKS 538
           +L A           S+    +H   +    +H   +   L     + G  ++A  + K 
Sbjct: 410 MLKA---------SLSILPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFK- 459

Query: 539 MPLRPNMIVWGALLA 553
           M  + +++ W A+L+
Sbjct: 460 MIEQKDVVAWSAMLS 474



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 205/424 (48%), Gaps = 10/424 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N+L+     N     AL ++   R    ++   T  T++K CA +    L +++H 
Sbjct: 267 MVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHS 326

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFD-EMPNRDVVSWSTMIRGYHRGGLPE 154
             +K+G      V  AL   YS+CG L  A  +F     +R+VVSW+ +I G  + G   
Sbjct: 327 CVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIP 386

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
            A+ +   MR   + P+E    +M+     +    L   IHA V++   + +   ++ TA
Sbjct: 387 LAVVLFSRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKT--NYQHIPSVGTA 440

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+  YSK G+   A  +F  + Q  VV+W+ M+S + +  +      LF +M  + + P+
Sbjct: 441 LLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPN 500

Query: 275 EITILSLIIECGF-VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           E TI S+I  C     G+  G+  HA  ++  +  ++ +++ALV MY +   I SA+ +F
Sbjct: 501 EFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVF 560

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG-AL 392
           +    +D++ WN++IS YAQ     KA E F  M+ S ++ + VT + ++  CT  G  +
Sbjct: 561 ERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVV 620

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM-WNAMMAG 451
           E  ++  + +    +   +     +VD+Y++ G ++    L  +  +    M W  ++  
Sbjct: 621 EGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGA 680

Query: 452 YGMH 455
             +H
Sbjct: 681 CRVH 684



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 174/376 (46%), Gaps = 19/376 (5%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           FS T     +  + ++++  I+N     A+ +++ MR++    + FT   +LKA   +  
Sbjct: 360 FSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI-- 417

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
             L  +IH   IK        V  AL+  YS+ GS   A  +F  +  +DVV+WS M+  
Sbjct: 418 --LPPQIHAQVIKTNYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSC 475

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFA-DVADVDLGKAIHACVVRNCKDE 205
           + + G  E A  +  +M    I+P+E  + S++   A   A VD G+  HA  ++    +
Sbjct: 476 HAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHD 535

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
              + +++AL+ MYS+ GN+  A+ +F R     +VSW  MISGY +     + +  F +
Sbjct: 536 --AICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQ 593

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCR 324
           M    +    +T L++I+ C   G +  G+     ++R+     ++     +VD+Y +  
Sbjct: 594 MEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAG 653

Query: 325 EIRSARTLFDGMK-SKDVMIWNAVISAYAQAHCIDKAFEL--FIHMKVSKVRPNEVTMVG 381
           ++    +L   M      M+W  ++ A      + K  EL  F   K+  + P++ +   
Sbjct: 654 KLDETMSLIRDMPFPAGAMVWRTLLGACR----VHKNVELGKFSADKLLSLEPHDSSTYV 709

Query: 382 LLSLCTEAGALEMGKW 397
           LLS    A     GKW
Sbjct: 710 LLSNIYAAA----GKW 721


>gi|125555089|gb|EAZ00695.1| hypothetical protein OsI_22717 [Oryza sativa Indica Group]
          Length = 992

 Score =  364 bits (934), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 187/580 (32%), Positives = 339/580 (58%), Gaps = 7/580 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL++ Y+ NNK +  +     M+  G + D  T+ +++  C      H+GK IH +A+
Sbjct: 413 WNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAV 472

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++ L+ +  V NAL+ MY++CG L     LF  M  R ++SW+T+I G+   G     L 
Sbjct: 473 RSRLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACLR 532

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN-CKDEKLGVAIATALID 217
              +MR  D++   V +I+++S  + + D+ +G+++H+  +R+ C    L V++A ALI 
Sbjct: 533 FFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCN---LDVSVANALIT 589

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+ CG +   ++LF+ L+  + +S+  +++GY + N   E + LF  MI+ +  P+ IT
Sbjct: 590 MYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFKEILPLFYHMIKNDQKPNIIT 649

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           +L+L+  C     LQ GK +H+Y +RN  +   ++  + + MY +   +     LF  + 
Sbjct: 650 LLNLLPICH--SQLQ-GKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLFCLVG 706

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            ++ ++WNA++SA  Q      AF+ F  ++   V+ + VTM+ L+S C++ G  ++ + 
Sbjct: 707 ERNNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQLGKADLAEC 766

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +     ++G +  +++  AL+DM+++CG ++ A ++F  ++ +D   W+ M+  Y MHG 
Sbjct: 767 VTAIALQKGFDGTIVVLNALIDMHSRCGSISFARKIFDISMEKDSVSWSTMINAYSMHGD 826

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G  AL  F+ M  +G+KP+ ITF+ +L+ACS +G + +G+++F  M+   G+ P++EHY 
Sbjct: 827 GGSALDLFLMMVSTGIKPDDITFVSVLSACSRSGFLEQGRTLFRSMLADHGITPRMEHYA 886

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLLGR G LDEA++++ +MP RP+  +  +LL A + H N  +GE     + E +  
Sbjct: 887 CMVDLLGRTGHLDEAYDIVTTMPFRPSKSLLESLLGACRFHGNSKLGESVGKILTESDHG 946

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
           N    V++SNIYA A +W+D   +R  M+   + K+ G S
Sbjct: 947 NPRSYVMLSNIYASAGKWSDYERLRSDMEAKGLIKDVGVS 986



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 269/519 (51%), Gaps = 7/519 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N++++ Y  N     A      M+++G   +  ++  I+   + + +   G  +H 
Sbjct: 208 LISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPLHA 267

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           FA+K+G+ GD  V+ A I MY+  G L S+  LF +    ++VS ++MI    + G  E+
Sbjct: 268 FALKSGVLGDESVTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEK 327

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A  V R MR   + P+ V ++S++   ++   ++ G+++H  V++    E+  V++ +AL
Sbjct: 328 AFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQ--VSVVSAL 385

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           + MYSK G+L  A  LF+ + + S + W  +ISGY+  N+ N  +     M  E V P  
Sbjct: 386 VSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDA 445

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T++S+I +C     L +GK +HAY +R+  E + ++ NAL+ MY  C ++     LF  
Sbjct: 446 LTVISVISKCRHTEDLHVGKSIHAYAVRSRLELNESVMNALLAMYADCGQLSICCKLFHT 505

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M+ + ++ WN +IS +A+          F  M+++ ++ + VT++ L+S  +    + +G
Sbjct: 506 MEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIEDITVG 565

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H+   + G  +DV +  AL+ MY  CG +    +LF      +   +NA+M GY  +
Sbjct: 566 ESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKN 625

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
              +E L  F  M ++  KPN IT + LL  C H+ L  +GK+V    +     + +   
Sbjct: 626 NLFKEILPLFYHMIKNDQKPNIITLLNLLPIC-HSQL--QGKTVHSYAIRNFSKL-ETSL 681

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +   + +  R   L+  H +   +  R N IVW A+L+A
Sbjct: 682 FTSAICMYSRFNNLEYCHNLFCLVGERNN-IVWNAILSA 719



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/540 (24%), Positives = 271/540 (50%), Gaps = 7/540 (1%)

Query: 21  IKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA 80
           + +     + ++++ L   NS+++  +++     A  ++  MR  G   +  T+ +IL  
Sbjct: 294 LSSSLSLFHQSLVDNLVSCNSMISVCMQHGAWEKAFGVFRLMRCKGLVPNLVTVVSILPC 353

Query: 81  CAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSW 140
           C+     + G+ +HG  IK GL     V +AL+ MYS+ G L SA +LF  +  +  + W
Sbjct: 354 CSNFFGINHGESVHGMVIKFGLAEQVSVVSALVSMYSKLGDLDSAVFLFSSVTEKSQLLW 413

Query: 141 STMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR 200
           +++I GY         +  +R M+   + P  + +IS++S      D+ +GK+IHA  VR
Sbjct: 414 NSLISGYLVNNKWNMVMGSVRRMQIEGVDPDALTVISVISKCRHTEDLHVGKSIHAYAVR 473

Query: 201 NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
           +    +L  ++  AL+ MY+ CG L+   +LF+ +   +++SW  +ISG+    +    +
Sbjct: 474 S--RLELNESVMNALLAMYADCGQLSICCKLFHTMEVRTLISWNTIISGFAENGDSVACL 531

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
           R F +M   ++    +T+++LI     +  + +G+ +H+  +R+G    +++ANAL+ MY
Sbjct: 532 RFFCQMRLADMQFDLVTLIALISSLSAIEDITVGESVHSLAIRSGCNLDVSVANALITMY 591

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
             C  I++   LFD + S + + +NA+++ Y + +   +   LF HM  +  +PN +T++
Sbjct: 592 TNCGIIQAGEKLFDSLSSVNTISYNALMTGYRKNNLFKEILPLFYHMIKNDQKPNIITLL 651

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
            LL +C        GK +H+Y  +   +++  L T+ + MY++  ++   + LF     R
Sbjct: 652 NLLPICHSQ---LQGKTVHSYAIRNFSKLETSLFTSAICMYSRFNNLEYCHNLFCLVGER 708

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           +  +WNA+++          A  +F  ++   VK + +T + L++ACS  G     + V 
Sbjct: 709 NNIVWNAILSACVQCKQAGVAFDYFRQIQFLNVKTDAVTMLALISACSQLGKADLAECVT 768

Query: 501 DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
              +   G    I     ++D+  R G +  A + I  + +  + + W  ++ A  +H +
Sbjct: 769 AIALQK-GFDGTIVVLNALIDMHSRCGSISFARK-IFDISMEKDSVSWSTMINAYSMHGD 826



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 220/416 (52%), Gaps = 6/416 (1%)

Query: 26  KFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVL 85
           K  +T  +  L  +N++++ + +N    + L  +  MR    + D  T+  ++ + + + 
Sbjct: 501 KLFHTMEVRTLISWNTIISGFAENGDSVACLRFFCQMRLADMQFDLVTLIALISSLSAIE 560

Query: 86  MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIR 145
              +G+ +H  AI++G + D  V+NALI MY+ CG + +   LFD + + + +S++ ++ 
Sbjct: 561 DITVGESVHSLAIRSGCNLDVSVANALITMYTNCGIIQAGEKLFDSLSSVNTISYNALMT 620

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           GY +  L +E L +   M   D +P+   +I++++L         GK +H+  +RN    
Sbjct: 621 GYRKNNLFKEILPLFYHMIKNDQKPN---IITLLNLLPICHSQLQGKTVHSYAIRNF--S 675

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           KL  ++ T+ I MYS+  NL Y   LF  + + + + W  ++S  ++C +       F +
Sbjct: 676 KLETSLFTSAICMYSRFNNLEYCHNLFCLVGERNNIVWNAILSACVQCKQAGVAFDYFRQ 735

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           +   NV    +T+L+LI  C  +G   L + + A  L+ GF+ ++ + NAL+DM+ +C  
Sbjct: 736 IQFLNVKTDAVTMLALISACSQLGKADLAECVTAIALQKGFDGTIVVLNALIDMHSRCGS 795

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           I  AR +FD    KD + W+ +I+AY+       A +LF+ M  + ++P+++T V +LS 
Sbjct: 796 ISFARKIFDISMEKDSVSWSTMINAYSMHGDGGSALDLFLMMVSTGIKPDDITFVSVLSA 855

Query: 386 CTEAGALEMGKWL-HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
           C+ +G LE G+ L  + +   G+   +     +VD+  + G ++ AY + +   +R
Sbjct: 856 CSRSGFLEQGRTLFRSMLADHGITPRMEHYACMVDLLGRTGHLDEAYDIVTTMPFR 911



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 233/500 (46%), Gaps = 21/500 (4%)

Query: 65  NGSEVDNFTIPTILKACAQVL-MTHLGK---EIHG-FAIKNGLDGDAYVSNALIQMYSEC 119
           + S   +  IP  + A +++L  T   K   ++H   A+   L  DA V    ++ Y   
Sbjct: 30  DASSTPSSAIPPRVDAVSRLLRATRSAKCLSKLHARLAVTGALREDASVVAGAVERYLFF 89

Query: 120 GSLVSARYLFDEM--PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMIS 177
           G   SA  +F        +V   +  +R +   G   E L + RE+              
Sbjct: 90  GKPASAAAVFAGFYRGRAEVYDLNIAVRCFSDHGFHRELLGLYREV--CAFGSDNFTFPP 147

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
           ++   A V+ + LGK +H  VVR      +GV   TAL+DMY+K G +  ++++F+ +  
Sbjct: 148 VIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQ--TALLDMYAKSGQVDLSRRVFDGMKS 205

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
             ++SW  MISGY     + E      +M ++   P+  +++ ++     +G    G  L
Sbjct: 206 RDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGDPL 265

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           HA+ L++G     ++  A + MY     + S+ +LF      +++  N++IS   Q    
Sbjct: 266 HAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHGAW 325

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
           +KAF +F  M+   + PN VT+V +L  C+    +  G+ +H  + K GL   V + +AL
Sbjct: 326 EKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESVHGMVIKFGLAEQVSVVSAL 385

Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
           V MY+K GD++ A  LFS    +   +WN++++GY ++      +     M+  GV P+ 
Sbjct: 386 VSMYSKLGDLDSAVFLFSSVTEKSQLLWNSLISGYLVNNKWNMVMGSVRRMQIEGVDPDA 445

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL----GRAGLLDEAH 533
           +T I +++ C H   +  GKS     +H   +  ++E    +++ L       G L    
Sbjct: 446 LTVISVISKCRHTEDLHVGKS-----IHAYAVRSRLELNESVMNALLAMYADCGQLSICC 500

Query: 534 EMIKSMPLRPNMIVWGALLA 553
           ++  +M +R  +I W  +++
Sbjct: 501 KLFHTMEVR-TLISWNTIIS 519



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 160/303 (52%), Gaps = 4/303 (1%)

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T   +I  C  V  L+LGK +H  ++R G   ++ +  AL+DMY K  ++  +R +FDGM
Sbjct: 144 TFPPVIRACAAVSCLRLGKEVHCRVVRTGHGGNVGVQTALLDMYAKSGQVDLSRRVFDGM 203

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           KS+D++ WNA+IS Y+   C+ +A E    M+    RPN  ++VG++S+ +  G  + G 
Sbjct: 204 KSRDLISWNAMISGYSLNGCLLEAAEALKQMQQDGFRPNASSLVGIVSMVSGLGVRDAGD 263

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            LH +  K G+  D  +  A + MYA  G ++ +  LF +++  ++   N+M++    HG
Sbjct: 264 PLHAFALKSGVLGDESVTPAFISMYAAFGHLSSSLSLFHQSLVDNLVSCNSMISVCMQHG 323

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             E+A   F  M   G+ PN +T + +L  CS+   +  G+SV   MV   GL  ++   
Sbjct: 324 AWEKAFGVFRLMRCKGLVPNLVTVVSILPCCSNFFGINHGESV-HGMVIKFGLAEQVSVV 382

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK--NPSMGEIAATQILEI 574
             +V +  + G LD A  +  S+  +  ++ W +L++   ++   N  MG +   QI  +
Sbjct: 383 SALVSMYSKLGDLDSAVFLFSSVTEKSQLL-WNSLISGYLVNNKWNMVMGSVRRMQIEGV 441

Query: 575 EPQ 577
           +P 
Sbjct: 442 DPD 444


>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 589

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 198/565 (35%), Positives = 317/565 (56%), Gaps = 14/565 (2%)

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           I ++L  CA++     G  +H  A+K G+  D  VSN +I +YS+CG+++ AR +FDEM 
Sbjct: 6   IGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMS 65

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
           +R++VSWS +I GY + G P  AL +  +MR   I P+E    S++S  A +  +  G  
Sbjct: 66  DRNLVSWSAIISGYDQTGQPLLALNLFSQMR---IVPNEYVFASVISACASLTALSQGLQ 122

Query: 194 IHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
           +HA      +  KLG      ++ ALI MY KCG    A  + N +++ + VS+  +I+G
Sbjct: 123 VHA------QSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAG 176

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
           ++   +  +G+  F  M ++   P   T   L+  C        G  LH  +++   E S
Sbjct: 177 FVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDS 236

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM-K 368
             + N ++ MY K   I  A  +F  +K KD++ WN +++A       ++A  +F  M  
Sbjct: 237 AFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLD 296

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
           V  V+P++ T  G+L+ C    ++  GK +H ++ +     DV +  ALV+MYAKCG + 
Sbjct: 297 VCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIK 356

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            +Y +F     R++  WN ++A +G HG G  AL  F  M+  G+ P+ +TF+GLL AC+
Sbjct: 357 NSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACN 416

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           HAGLV EG+  F+ M    G+ P IEH+ C++DLLGRAG L EA E ++ +P   + I+ 
Sbjct: 417 HAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIIL 476

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
           G+LL+A +LH +  +GE  ATQ+L+++P      VL+SN+YA    W  VA   +++K  
Sbjct: 477 GSLLSACRLHGDMVIGEHLATQLLKLQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYS 536

Query: 609 RVKKEPGFSSVEVNGLVHKFIRGGM 633
            +KKEPG S ++V G+  KF  G +
Sbjct: 537 GLKKEPGHSLIDVMGMFEKFTMGDL 561



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 215/425 (50%), Gaps = 10/425 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  ++++++ Y +  +P  ALN+++ MR   +E   +   +++ ACA +     G ++H 
Sbjct: 69  LVSWSAIISGYDQTGQPLLALNLFSQMRIVPNE---YVFASVISACASLTALSQGLQVHA 125

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            ++K G    ++VSNALI MY +CG    A  + + M   + VS++ +I G+     PE+
Sbjct: 126 QSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEK 185

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATA 214
            +E  + MR     P       ++ +     D   G  +H  +++ N +D      I   
Sbjct: 186 GIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAF---IGNV 242

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN-VFP 273
           +I MYSK   +  A+++F  + +  ++SW  +++    C +    +R+F +M++   V P
Sbjct: 243 IITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKP 302

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
            + T   ++  C  +  ++ GK +H +++R      + ++NALV+MY KC  I+++  +F
Sbjct: 303 DDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVF 362

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
                ++++ WN +I+A+       +A E F  MK   + P+ VT VGLL+ C  AG +E
Sbjct: 363 RRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVE 422

Query: 394 MGK-WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY-RDICMWNAMMAG 451
            G+ + ++  E  G+  ++   + L+D+  + G +  A     +  +  D  +  ++++ 
Sbjct: 423 EGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSA 482

Query: 452 YGMHG 456
             +HG
Sbjct: 483 CRLHG 487


>gi|359480813|ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Vitis vinifera]
          Length = 634

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 208/635 (32%), Positives = 326/635 (51%), Gaps = 68/635 (10%)

Query: 10  LEQTRQCHAHIIKT---HFKFSYTNII----------------NPLTRYN-----SLVTS 45
           L Q +Q H HII     H  F  T ++                + L++ N     +++  
Sbjct: 39  LHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFDKLSQPNVFAWTAILGF 98

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
           Y +N      +  Y+ M+  G   D +  P + +AC Q+L   +G ++H   +  G + D
Sbjct: 99  YSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQLLWLEVGIQVHKDVVICGCEFD 158

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
             V N+LI MYS+ G + S R +FDEM  RDV+SW++MI GY   G  E ++E++  MR 
Sbjct: 159 LQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVCNGFLEFSVELLASMRI 218

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
               P  V                                         ++D Y + G  
Sbjct: 219 RGFEPDMVTW-------------------------------------NTVMDAYCRMGLC 241

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV-FPSEITILSLIIE 284
             A ++F ++ + +++S T ++SGY R     + + +F EM+   V FP   ++ S+++ 
Sbjct: 242 DEAWEIFEQIKEPNIISLTTLVSGYSRIGNHEKSLGIFREMMSRRVAFPDLDSLSSVLVS 301

Query: 285 CGFVGGLQLGKWLHAYILR--NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
           C  +G L  G+ +H Y +R  +   F  +   AL+ MY KC+ I+ A  +F+ M   DV+
Sbjct: 302 CRHLGALVCGQEIHGYGIRSVDSSSFYKSAGAALLTMYVKCKRIQDALNVFELMDRFDVV 361

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
            WNA+I  +        A E F  M+ S +  N++T+  +L  C     L+ GK +H YI
Sbjct: 362 TWNAMILGFVDLEMGHLALECFSKMQRSGIMNNQITISTVLPACD----LKSGKQVHAYI 417

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
            K      + +  AL+ MY+KCG +  AY +FS  I RD+  WN M+ G+GMHG G+ AL
Sbjct: 418 TKNSFSSVIPVWNALIHMYSKCGCIGTAYSIFSNMISRDLVSWNTMIGGFGMHGLGQFAL 477

Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDL 522
               DM  S V PN +TF   L+ACSH+GLV EG  +F  M    G  P +EH+ C+VDL
Sbjct: 478 QLLRDMSHSDVCPNSVTFTSALSACSHSGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDL 537

Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYN 582
           L RA  L++A   I+ MPL+P+  +W ALLAA +  +N S+ ++AA Q+ ++EP++ G  
Sbjct: 538 LARADRLEDAVGFIEKMPLKPSKHIWSALLAACRAQQNVSVAKLAAEQLFQLEPEHAGNY 597

Query: 583 VLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
           V +SNIYA A RW+D   VR++M++  + K  G+S
Sbjct: 598 VTLSNIYARAGRWDDAVAVRKLMEDRGLVKPSGYS 632



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 116/230 (50%)

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           S   +  L+  C     L  GK LH +I+  G +    M   LV MY  C ++ SA+ LF
Sbjct: 22  SSFQLNHLLQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALF 81

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           D +   +V  W A++  Y++    D+    +  MK+  V P++     +   C +   LE
Sbjct: 82  DKLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQLLWLE 141

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           +G  +H  +   G E D+ +  +L+DMY+K GDV    R+F E + RD+  WN+M++GY 
Sbjct: 142 VGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYV 201

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            +G  E ++     M   G +P+ +T+  +++A    GL  E   +F+++
Sbjct: 202 CNGFLEFSVELLASMRIRGFEPDMVTWNTVMDAYCRMGLCDEAWEIFEQI 251


>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like, partial [Brachypodium distachyon]
          Length = 735

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 192/593 (32%), Positives = 331/593 (55%), Gaps = 4/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSLV+S++ N     A      M ++G  V+  ++ +++ AC        G  +HG  +
Sbjct: 145 WNSLVSSFLANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVL 204

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GLD    + NAL+ MY + G + ++  +F+ MP R+ VSW++ I  +   GL  + L 
Sbjct: 205 KTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIGCFLNAGLYGDVLA 264

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R M      P  + + S++    ++   DLG+ +H   ++   +  L + +A +L+DM
Sbjct: 265 LFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAME--LDIFVANSLVDM 322

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G+L  A  +F ++   +VVSW  MI+  ++    +E   L  +M ++   P+ IT+
Sbjct: 323 YAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITL 382

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           ++L+  C  +  L+ GK +HA+ +R G  F L ++NAL+DMY KC ++R A+++FD +  
Sbjct: 383 VNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD-LSE 441

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + +N +I  Y+Q+    ++  LF  +    +  + ++ +G L+ CT   + + GK +
Sbjct: 442 KDDVSYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEI 501

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + ++ L     L   L+ +Y K G ++ A ++F+    +D+  WN M+ GYGMHG  
Sbjct: 502 HGVLVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQI 561

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           + A   F  M+  GV  + +++I +L+ CSH GLV  GK  F  M+    L P+  HY C
Sbjct: 562 DAAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHML-AQNLEPQQMHYAC 620

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLLGR+G L E+ E+I  MP   N  VWGALL A ++H N  + + AA  + E++P++
Sbjct: 621 MVDLLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFELKPEH 680

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            GY  ++ N+YA A RWN+   +R +MK  +V+K P +S V+    +  F+ G
Sbjct: 681 SGYYSVLRNMYAEAGRWNEAHKIRTLMKSRKVQKNPAYSWVQSGNKLQAFLVG 733



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/509 (28%), Positives = 256/509 (50%), Gaps = 7/509 (1%)

Query: 52  PSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL--GKEIHGFAIKNGLDGDAYVS 109
           P+ AL +Y  M ++G   D+ T P  L A A     H   G E+H  A+++G   D +  
Sbjct: 55  PTEALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAHPAKGLELHAAALRSGHLADVFAG 114

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
           N L+  Y+ CG    AR +FDEMP RDVVSW++++  +    + ++A + +  M    + 
Sbjct: 115 NTLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVP 174

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
            +  +++S+V       +   G  +H  V++   D    V +  AL+DMY K G++  + 
Sbjct: 175 VNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSI--VNLGNALVDMYGKFGHVEASM 232

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           ++F  + + + VSW   I  ++      + + LF  M E    P  IT+ SL+     +G
Sbjct: 233 KVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELG 292

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
              LG+ +H Y ++   E  + +AN+LVDMY K   +  A  +F+ ++ ++V+ WNA+I+
Sbjct: 293 YFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIA 352

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
              Q     +AF L I M+     PN +T+V LL  C+   +L+ GK +H +  + GL  
Sbjct: 353 NLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMF 412

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           D+ +  AL+DMYAKCG +  A  +F  +   D+  +N ++ GY       E+L  F  + 
Sbjct: 413 DLFISNALIDMYAKCGQLRLAQSIFDLSEKDDVS-YNTLILGYSQSPWSFESLNLFKQLS 471

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
             G++ + I+F+G L AC++     +GK +   +V  L L         ++ L  + G+L
Sbjct: 472 SVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRL-LSNHPFLANTLLGLYTKGGML 530

Query: 530 DEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           D A ++   +    ++  W  ++    +H
Sbjct: 531 DTASKIFNRIK-EKDVASWNNMIMGYGMH 558



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 198/427 (46%), Gaps = 11/427 (2%)

Query: 116 YSECGSLVSARYLFDEMPNR--DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEV 173
           Y+    L S+R L    P R      W+++ R      LP EAL V   M    + P + 
Sbjct: 16  YAALSDLASSRLLLFHHPLRLRSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDR 75

Query: 174 AMISMVSLFADVADVDLGKAI--HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQL 231
                +   A  A     K +  HA  +R+       V     L+  Y+ CG+   A+++
Sbjct: 76  TFPFALHAAAAAAQAHPAKGLELHAAALRS--GHLADVFAGNTLVAFYAACGHAGDARRV 133

Query: 232 FNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV--G 289
           F+ +    VVSW  ++S ++     ++  +    M+   V  +  +++S++  CG    G
Sbjct: 134 FDEMPARDVVSWNSLVSSFLANKMFDDARQALLSMMRSGVPVNVASLVSVVPACGVEQEG 193

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
           G  LG  +H  +L+ G +  + + NALVDMYGK   + ++  +F+GM  ++ + WN+ I 
Sbjct: 194 GFGLG--VHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNEVSWNSAIG 251

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
            +  A        LF  M      P  +T+  LL    E G  ++G+ +H Y  K+ +E+
Sbjct: 252 CFLNAGLYGDVLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMEL 311

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           D+ +  +LVDMYAK G +  A  +F +   R++  WNAM+A    +G   EA    + M+
Sbjct: 312 DIFVANSLVDMYAKFGSLEKACAVFEKIEVRNVVSWNAMIANLVQNGAESEAFGLVIKMQ 371

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
           + G  PN IT + LL ACS    +  GK +    +   GL+  +     ++D+  + G L
Sbjct: 372 KDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIR-TGLMFDLFISNALIDMYAKCGQL 430

Query: 530 DEAHEMI 536
             A  + 
Sbjct: 431 RLAQSIF 437



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +N+++ + ++N   S A  +   M+K+G   ++ T+  +L AC+++     GK+
Sbjct: 341 VRNVVSWNAMIANLVQNGAESEAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQ 400

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IH ++I+ GL  D ++SNALI MY++CG L  A+ +FD +  +D VS++T+I GY +   
Sbjct: 401 IHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFD-LSEKDDVSYNTLILGYSQSPW 459

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
             E+L + +++  + I    ++ +  ++   +++    GK IH  +VR          +A
Sbjct: 460 SFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNH--PFLA 517

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
             L+ +Y+K G L  A ++FNR+ +  V SW  MI GY    +I+    LF  M +  V 
Sbjct: 518 NTLLGLYTKGGMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVT 577

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI-RSART 331
              ++ ++++  C   G ++ GK   +++L    E        +VD+ G+  ++  S   
Sbjct: 578 YDHVSYIAVLSVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACMVDLLGRSGQLTESVEI 637

Query: 332 LFDGMKSKDVMIWNAVISA 350
           + D     +  +W A++ A
Sbjct: 638 ILDMPFHANSDVWGALLGA 656


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 209/664 (31%), Positives = 348/664 (52%), Gaps = 43/664 (6%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTNIINPLTR-------------------------YNSLV 43
           ++E  +Q HAH+ K  +      + N L                           +NSL+
Sbjct: 112 DMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLI 171

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH---LGKEIHGFAIKN 100
           +S     K   AL  +  M     E  +FT+ +++ AC+ + M     +GK++H + ++ 
Sbjct: 172 SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK 231

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G + ++++ N L+ MY + G L S++ L      RD+V+W+T++    +     EALE +
Sbjct: 232 G-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYL 290

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
           REM    + P E  + S++   + +  +  GK +HA  ++N   ++    + +AL+DMY 
Sbjct: 291 REMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE-NSFVGSALVDMYC 349

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPSEITIL 279
            C  +   +++F+ +    +  W  MI+GY +     E + LF  M E   +  +  T+ 
Sbjct: 350 NCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMA 409

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
            ++  C   G     + +H ++++ G +    + N L+DMY +  +I  A  +F  M+ +
Sbjct: 410 GVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR 469

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHM-----KVSK------VRPNEVTMVGLLSLCTE 388
           D++ WN +I+ Y  +   + A  L   M     KVSK      ++PN +T++ +L  C  
Sbjct: 470 DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAA 529

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
             AL  GK +H Y  K  L  DV + +ALVDMYAKCG +  + ++F +   +++  WN +
Sbjct: 530 LSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVI 589

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +  YGMHG G+EA+     M   GVKPN +TFI +  ACSH+G+V EG  +F  M    G
Sbjct: 590 IMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYG 649

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI-VWGALLAASKLHKNPSMGEIA 567
           + P  +HY C+VDLLGRAG + EA++++  MP   N    W +LL AS++H N  +GEIA
Sbjct: 650 VEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIA 709

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHK 627
           A  ++++EP    + VL++NIY+ A  W+    VRR MKE  V+KEPG S +E    VHK
Sbjct: 710 AQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHK 769

Query: 628 FIRG 631
           F+ G
Sbjct: 770 FVAG 773



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 163/536 (30%), Positives = 277/536 (51%), Gaps = 22/536 (4%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           L+ S +++N    A+  Y  M   G + DN+  P +LKA A +    LGK+IH    K G
Sbjct: 68  LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127

Query: 102 LDGDAY-VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
              D+  V+N L+ +Y +CG   +   +FD +  R+ VSW+++I         E ALE  
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVD---LGKAIHACVVRNCKDEKLGVAIATALID 217
           R M   ++ PS   ++S+V+  +++   +   +GK +HA  +R     +L   I   L+ 
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK---GELNSFIINTLVA 244

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY K G LA +K L        +V+W  ++S   +  ++ E +    EM+ E V P E T
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           I S++  C  +  L+ GK LHAY L+NG  + +  + +ALVDMY  C+++ S R +FDGM
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMG 395
             + + +WNA+I+ Y+Q     +A  LFI M+ S  +  N  TM G++  C  +GA    
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H ++ K+GL+ D  ++  L+DMY++ G ++ A R+F +   RD+  WN M+ GY   
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484

Query: 456 GCGEEALIFFVDME-----------RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
              E+AL+    M+           R  +KPN IT + +L +C+    + +GK +    +
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 544

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
               L   +     +VD+  + G L  + ++   +P + N+I W  ++ A  +H N
Sbjct: 545 KN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGN 598



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 134/425 (31%), Positives = 221/425 (52%), Gaps = 21/425 (4%)

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           W  ++R   R  L  EA+    +M  + I+P   A  +++   AD+ D++LGK IHA V 
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 200 RNCKDEKLG-----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
                 K G     V +A  L+++Y KCG+     ++F+R+++ + VSW  +IS      
Sbjct: 125 ------KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 178

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVG---GLQLGKWLHAYILRNGFEFSLA 311
           +    +  F  M++ENV PS  T++S++  C  +    GL +GK +HAY LR G E +  
Sbjct: 179 KWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSF 237

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           + N LV MYGK  ++ S++ L      +D++ WN V+S+  Q   + +A E    M +  
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG-LEVDVILKTALVDMYAKCGDVNGA 430
           V P+E T+  +L  C+    L  GK LH Y  K G L+ +  + +ALVDMY  C  V   
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS-GVKPNGITFIGLLNACSH 489
            R+F     R I +WNAM+AGY  +   +EAL+ F+ ME S G+  N  T  G++ AC  
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417

Query: 490 AGLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           +G  +  +++   +V  GL     +++   ++D+  R G +D A  +   M  R +++ W
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQN--TLMDMYSRLGKIDIAMRIFGKMEDR-DLVTW 474

Query: 549 GALLA 553
             ++ 
Sbjct: 475 NTMIT 479


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 209/664 (31%), Positives = 348/664 (52%), Gaps = 43/664 (6%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTNIINPLTR-------------------------YNSLV 43
           ++E  +Q HAH+ K  +      + N L                           +NSL+
Sbjct: 112 DMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLI 171

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH---LGKEIHGFAIKN 100
           +S     K   AL  +  M     E  +FT+ +++ AC+ + M     +GK++H + ++ 
Sbjct: 172 SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK 231

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G + ++++ N L+ MY + G L S++ L      RD+V+W+T++    +     EALE +
Sbjct: 232 G-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYL 290

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
           REM    + P E  + S++   + +  +  GK +HA  ++N   ++    + +AL+DMY 
Sbjct: 291 REMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE-NSFVGSALVDMYC 349

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPSEITIL 279
            C  +   +++F+ +    +  W  MI+GY +     E + LF  M E   +  +  T+ 
Sbjct: 350 NCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMA 409

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
            ++  C   G     + +H ++++ G +    + N L+DMY +  +I  A  +F  M+ +
Sbjct: 410 GVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR 469

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHM-----KVSK------VRPNEVTMVGLLSLCTE 388
           D++ WN +I+ Y  +   + A  L   M     KVSK      ++PN +T++ +L  C  
Sbjct: 470 DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAA 529

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
             AL  GK +H Y  K  L  DV + +ALVDMYAKCG +  + ++F +   +++  WN +
Sbjct: 530 LSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVI 589

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +  YGMHG G+EA+     M   GVKPN +TFI +  ACSH+G+V EG  +F  M    G
Sbjct: 590 IMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYG 649

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI-VWGALLAASKLHKNPSMGEIA 567
           + P  +HY C+VDLLGRAG + EA++++  MP   N    W +LL AS++H N  +GEIA
Sbjct: 650 VEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIA 709

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHK 627
           A  ++++EP    + VL++NIY+ A  W+    VRR MKE  V+KEPG S +E    VHK
Sbjct: 710 AQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHK 769

Query: 628 FIRG 631
           F+ G
Sbjct: 770 FVAG 773



 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 163/536 (30%), Positives = 277/536 (51%), Gaps = 22/536 (4%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           L+ S +++N    A+  Y  M   G + DN+  P +LKA A +    LGK+IH    K G
Sbjct: 68  LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127

Query: 102 LDGDAY-VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
              D+  V+N L+ +Y +CG   +   +FD +  R+ VSW+++I         E ALE  
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVD---LGKAIHACVVRNCKDEKLGVAIATALID 217
           R M   ++ PS   ++S+V+  +++   +   +GK +HA  +R     +L   I   L+ 
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK---GELNSFIINTLVA 244

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY K G LA +K L        +V+W  ++S   +  ++ E +    EM+ E V P E T
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           I S++  C  +  L+ GK LHAY L+NG  + +  + +ALVDMY  C+++ S R +FDGM
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMG 395
             + + +WNA+I+ Y+Q     +A  LFI M+ S  +  N  TM G++  C  +GA    
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H ++ K+GL+ D  ++  L+DMY++ G ++ A R+F +   RD+  WN M+ GY   
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484

Query: 456 GCGEEALIFFVDME-----------RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
              E+AL+    M+           R  +KPN IT + +L +C+    + +GK +    +
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 544

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
               L   +     +VD+  + G L  + ++   +P + N+I W  ++ A  +H N
Sbjct: 545 KN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGN 598



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 134/425 (31%), Positives = 221/425 (52%), Gaps = 21/425 (4%)

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           W  ++R   R  L  EA+    +M  + I+P   A  +++   AD+ D++LGK IHA V 
Sbjct: 65  WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124

Query: 200 RNCKDEKLG-----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
                 K G     V +A  L+++Y KCG+     ++F+R+++ + VSW  +IS      
Sbjct: 125 ------KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 178

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVG---GLQLGKWLHAYILRNGFEFSLA 311
           +    +  F  M++ENV PS  T++S++  C  +    GL +GK +HAY LR G E +  
Sbjct: 179 KWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSF 237

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           + N LV MYGK  ++ S++ L      +D++ WN V+S+  Q   + +A E    M +  
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG-LEVDVILKTALVDMYAKCGDVNGA 430
           V P+E T+  +L  C+    L  GK LH Y  K G L+ +  + +ALVDMY  C  V   
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS-GVKPNGITFIGLLNACSH 489
            R+F     R I +WNAM+AGY  +   +EAL+ F+ ME S G+  N  T  G++ AC  
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417

Query: 490 AGLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           +G  +  +++   +V  GL     +++   ++D+  R G +D A  +   M  R +++ W
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQN--TLMDMYSRLGKIDIAMRIFGKMEDR-DLVTW 474

Query: 549 GALLA 553
             ++ 
Sbjct: 475 NTMIT 479


>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 944

 Score =  363 bits (933), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 195/582 (33%), Positives = 317/582 (54%), Gaps = 3/582 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++  Y+KN      L +   MR+   +++   +   L   A++     GKEI+ +A+
Sbjct: 267 WATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYAL 326

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + GL  D  V+  ++ MY++CG L  AR LF  +  RD+V+WS  +      G P E L 
Sbjct: 327 QMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLS 386

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + + M++  ++P +  +  +VS   +++++ LGK +H   ++   D +  +++ T L+ M
Sbjct: 387 IFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIK--ADMESDISMVTTLVSM 444

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y +     YA  LFNR+    +V W  +I+G+ +  + +  + +F  +    + P   T+
Sbjct: 445 YIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTM 504

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           + L   C  +  L LG  LH  I ++GFE  + +  AL+DMY KC  + S   LF   K 
Sbjct: 505 VGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKH 564

Query: 339 -KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KD + WN +I+ Y      ++A   F  MK+  VRPN VT V +L   +    L     
Sbjct: 565 VKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMA 624

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
            HT I + G     ++  +L+DMYAKCG +  + + F E   +D   WNAM++ Y MHG 
Sbjct: 625 FHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQ 684

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           GE A+  F  M+ S V+ + +++I +L+AC H+GL+ EG  +F  M     + P +EHY 
Sbjct: 685 GELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYA 744

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLLG AGL DE   ++  M   P+  VWGALLAA K+H N ++GE+A   +L++EP+
Sbjct: 745 CMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHSNVTLGEVAVHHLLKLEPR 804

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           N  ++V++S+IYA   RWND    R  +    +KK PG+S V
Sbjct: 805 NPVHHVVLSDIYAQCGRWNDARRTRSHINNHGLKKIPGYSWV 846



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 160/511 (31%), Positives = 271/511 (53%), Gaps = 19/511 (3%)

Query: 21  IKTHFKFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILK 79
           I THF      I NP L  YNS + +Y K +    A+N+Y  + K G + D FT   +LK
Sbjct: 52  IHTHF----LQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKPDKFTFNFVLK 107

Query: 80  ACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVS 139
           AC   L  H G  I+   + NGL+ D Y+  +LI M+ + G L +AR +FD+MP +D V 
Sbjct: 108 ACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVC 167

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           W+ MI G  +   P EALE+   M+       +V+++++    + + DV   K+IH  VV
Sbjct: 168 WNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVV 227

Query: 200 RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
           R      +   ++ +LIDMY KCG++  A+++F+R+     VSW  M++GY++     EG
Sbjct: 228 R----RSICGVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEG 283

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
           ++L  +M   NV  +++ +++ ++    +  L+ GK ++ Y L+ G    + +A  +V M
Sbjct: 284 LQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCM 343

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
           Y KC E++ AR LF  ++ +D++ W+A +SA  +     +   +F  M+   ++P++  +
Sbjct: 344 YAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAIL 403

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
             L+S CTE   + +GK +H Y  K  +E D+ + T LV MY +      A  LF+    
Sbjct: 404 SILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQI 463

Query: 440 RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           +DI +WN ++ G+  +G    AL  F  ++ SG+ P+  T +GL +AC          ++
Sbjct: 464 KDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSAC----------AI 513

Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
            D +  G  L   IE  G   D+  +  L+D
Sbjct: 514 MDDLDLGTCLHGGIEKSGFESDIHVKVALMD 544



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 73/154 (47%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           F  T  +     +N ++  Y+ N   + A++ +  M+      +  T  TIL A + + +
Sbjct: 559 FLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSI 618

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
                  H   I+ G      + N+LI MY++CG L  +   F EM N+D +SW+ M+  
Sbjct: 619 LREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSA 678

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
           Y   G  E A+ +   M+  ++R   V+ IS++S
Sbjct: 679 YAMHGQGELAVALFSVMQESNVRVDSVSYISVLS 712


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  363 bits (932), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 207/652 (31%), Positives = 339/652 (51%), Gaps = 76/652 (11%)

Query: 31  NIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
            I + +T YN+ +  + +     +A+ +    +K  SE++  T  ++L+ CA +     G
Sbjct: 61  TIDHQVTDYNAKILHFCQLGDLENAMELVCMCQK--SELETKTYGSVLQLCAGLKSLTDG 118

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLV--------------------------- 123
           K++H     N +  D  +   L+  Y+ CG L                            
Sbjct: 119 KKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKI 178

Query: 124 ------------------------SARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
                                   SA  LFD++ +RDV+SW++MI GY   GL E  L +
Sbjct: 179 GDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGI 238

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
            ++M ++ I      +IS++   A+   + LGKA+H+  +++  + +  +  +  L+DMY
Sbjct: 239 YKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERR--INFSNTLLDMY 296

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
           SKCG+L  A ++F ++ + +VVSWT MI+GY R    +  + L  +M +E V    + I 
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAIT 356

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           S++  C   G L  GK +H YI  N    +L + NAL+DMY KC  +  A ++F  M  K
Sbjct: 357 SILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVK 416

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           D++ WN +                     V +++P+  TM  +L  C    ALE GK +H
Sbjct: 417 DIISWNTM---------------------VGELKPDSRTMACILPACASLSALERGKEIH 455

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
            YI + G   D  +  ALVD+Y KCG +  A  LF     +D+  W  M+AGYGMHG G 
Sbjct: 456 GYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGN 515

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           EA+  F +M  +G++P+ ++FI +L ACSH+GL+ +G   F  M +   + PK+EHY CM
Sbjct: 516 EAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACM 575

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNY 579
           VDLL R G L +A++ I+++P+ P+  +WGALL   +++ +  + E  A ++ E+EP+N 
Sbjct: 576 VDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENT 635

Query: 580 GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           GY VL++NIYA A +  +V  +R  + +  ++K PG S +E+ G V+ F+ G
Sbjct: 636 GYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSG 687


>gi|222625199|gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
          Length = 691

 Score =  363 bits (932), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 186/559 (33%), Positives = 312/559 (55%), Gaps = 2/559 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + +LV ++ +     +A  ++  +R  G EV+ F + T+LK    +    L   +H 
Sbjct: 127 MVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHS 186

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A K G D +A+V + LI  YS C  +  A ++F+ +  +D V W+ M+  Y     PE 
Sbjct: 187 CAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPEN 246

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A  V  +MR    +P+  A+ S++     +  V LGK IH C ++   D +  V    AL
Sbjct: 247 AFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVG--GAL 304

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+KCG++  A+  F  +  + V+  + MIS Y + N+  +   LF  ++  +V P+E
Sbjct: 305 LDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNE 364

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            ++ S++  C  +  L  GK +H + ++ G E  L + NAL+D Y KC ++ S+  +F  
Sbjct: 365 YSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSS 424

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++  + + WN ++  ++Q+   ++A  +F  M+ +++   +VT   +L  C    ++   
Sbjct: 425 LRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHA 484

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H  IEK     D ++  +L+D YAKCG +  A ++F   + RDI  WNA+++GY +H
Sbjct: 485 GQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALH 544

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G   +AL  F  M +S V+ N ITF+ LL+ CS  GLV  G S+FD M    G+ P +EH
Sbjct: 545 GQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEH 604

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y C+V LLGRAG L++A + I  +P  P+ +VW ALL++  +HKN ++G  +A +ILEIE
Sbjct: 605 YTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIE 664

Query: 576 PQNYGYNVLMSNIYAVANR 594
           PQ+    VL+SN+YA A +
Sbjct: 665 PQDETTYVLLSNMYAAARK 683



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 145/501 (28%), Positives = 257/501 (51%), Gaps = 24/501 (4%)

Query: 69  VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG--DAYVSNALIQMYSECGSLVSAR 126
           VD+F     L+ C        G+ +HG  ++ G  G  D + +N L+ MY + G L SAR
Sbjct: 57  VDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASAR 116

Query: 127 YLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            LFD MP R++VS+ T+++ + + G  E A  + R +R+     ++  + +M+ L   + 
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMD 176

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
              L   +H+C  +   D      + + LID YS C  ++ A+ +FN + +   V WT M
Sbjct: 177 AAGLAGGVHSCAWKLGHDHN--AFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAM 234

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           +S Y   +      R+F++M      P+   + S++     +  + LGK +H   ++   
Sbjct: 235 VSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLN 294

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
           +    +  AL+DMY KC +I+ AR  F+ +   DV++ + +IS YAQ++  ++AFELF+ 
Sbjct: 295 DTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLR 354

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           +  S V PNE ++  +L  CT    L+ GK +H +  K G E D+ +  AL+D YAKC D
Sbjct: 355 LMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCND 414

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           ++ + ++FS     +   WN ++ G+   G GEEAL  F +M+ + +    +T+  +L A
Sbjct: 415 MDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRA 474

Query: 487 CS------HAGLV--TEGKSVFDK-MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK 537
           C+      HAG +  +  KS F+   V G            ++D   + G + +A ++ +
Sbjct: 475 CASTASIRHAGQIHCSIEKSTFNNDTVIG----------NSLIDTYAKCGYIRDALKVFQ 524

Query: 538 SMPLRPNMIVWGALLAASKLH 558
            +  R ++I W A+++   LH
Sbjct: 525 HLMER-DIISWNAIISGYALH 544



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 187/395 (47%), Gaps = 17/395 (4%)

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
           D   G+A+H  VVR     +L +  A  L++MY K G LA A++LF+R+ + ++VS+  +
Sbjct: 74  DARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTL 133

Query: 247 ISGYIRCNEINEGVRLFAEM------IEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           +  + +  +      LF  +      + + V  + + +   +   G  GG+    W    
Sbjct: 134 VQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAW---- 189

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
             + G + +  + + L+D Y  C  +  A  +F+G+  KD ++W A++S Y++  C + A
Sbjct: 190 --KLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENA 247

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
           F +F  M+VS  +PN   +  +L       ++ +GK +H    K   + +  +  AL+DM
Sbjct: 248 FRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDM 307

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           YAKCGD+  A   F    Y D+ + + M++ Y      E+A   F+ + RS V PN  + 
Sbjct: 308 YAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSL 367

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
             +L AC++   +  GK + +  +  +G    +     ++D   +   +D + ++  S+ 
Sbjct: 368 SSVLQACTNMVQLDFGKQIHNHAIK-IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLR 426

Query: 541 LRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
              N + W  ++          +GE A +   E++
Sbjct: 427 -DANEVSWNTIVVG---FSQSGLGEEALSVFCEMQ 457


>gi|302822082|ref|XP_002992701.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
 gi|300139547|gb|EFJ06286.1| hypothetical protein SELMODRAFT_135788 [Selaginella moellendorffii]
          Length = 941

 Score =  363 bits (932), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 195/560 (34%), Positives = 311/560 (55%), Gaps = 12/560 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL--------- 89
           +N++V++Y K      A+ +   M+  G   D+ T  TIL +C+Q  +            
Sbjct: 380 WNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQYGNSKSLTD 439

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G+++H   I NGLDGD Y+ N L+QMY  CGSL  AR  F  +  R+V SW+ +I    +
Sbjct: 440 GRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSWTILISLLVQ 499

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
            G   E LE+++ M       +++  IS++   +   D+ LGK IH  +    K  +  +
Sbjct: 500 NGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHERI--RTKGLESDI 557

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
             + AL++MY+ C +L  A+ +F R+    VVSWT++IS Y       E ++L+  M +E
Sbjct: 558 ITSNALLNMYTTCESLDEARLVFERMVFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQE 617

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
              P  +T++S++  C  +  L  GK +H  I+ +G E  + +  A+V  YGKC  +  A
Sbjct: 618 FSRPDAVTLISVLEACASLRALVEGKAIHERIVASGVETDVFVGTAVVSFYGKCEAVEDA 677

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           R +FD +  KD++ WNA+I AYAQ HC +KAF L++ M  +++ PN+VT++ LL  C+  
Sbjct: 678 RQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALYLEMVENQMPPNDVTLITLLDSCSST 737

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC-GDVNGAYRLFSEAIYRDICMWNAM 448
             +E G  LH     +G      +  AL++MYAKC G++  A   F     +++  W+++
Sbjct: 738 CKMERGSSLHREAAARGYLSHTSVVNALINMYAKCCGNLEAAQTAFESVASKNVVSWSSI 797

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +A Y  +G  + A   F  M + GV PN +TF  +L+ACSHAGL  EG S F  M     
Sbjct: 798 VAAYARNGEEDRARNLFWTMNQDGVLPNIVTFTSVLHACSHAGLADEGWSYFLSMQGDHH 857

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
           L P  EHYGCMV+LL ++G + +A   + +MP++P+   W +LL A ++H +   G +AA
Sbjct: 858 LEPTPEHYGCMVNLLAKSGRVKQAASFMSAMPVQPDASAWRSLLGACEVHTDKEYGALAA 917

Query: 569 TQILEIEPQNYGYNVLMSNI 588
            Q+L+ EP+N    VL+ NI
Sbjct: 918 KQLLDAEPRNSAAYVLLYNI 937



 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 148/510 (29%), Positives = 262/510 (51%), Gaps = 14/510 (2%)

Query: 55  ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
           A+  +  M   G + +  T+ ++L+ACA V     G+ IH   +      +  V NA   
Sbjct: 295 AIKTFELMNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAAS 354

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           +Y++C  +  A  +F  +P +D VSW+ ++  Y + GL  +A+ + R+M+     P ++ 
Sbjct: 355 LYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDIT 414

Query: 175 MIS---------MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
            I+         ++  + +   +  G+ +H+ ++ N  D      +   L+ MY +CG+L
Sbjct: 415 FITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISNGLDGD--TYLGNLLVQMYGRCGSL 472

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
             A+  F  ++Q +V SWT++IS  ++  E +EG+ L   M  E    ++IT +SL+  C
Sbjct: 473 DDARAAFQGIHQRNVFSWTILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGAC 532

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
              G L LGK +H  I   G E  +  +NAL++MY  C  +  AR +F+ M  +DV+ W 
Sbjct: 533 SVTGDLSLGKTIHERIRTKGLESDIITSNALLNMYTTCESLDEARLVFERMVFRDVVSWT 592

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
            +ISAYA A    +A +L+  M+    RP+ VT++ +L  C    AL  GK +H  I   
Sbjct: 593 IIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGKAIHERIVAS 652

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
           G+E DV + TA+V  Y KC  V  A ++F   + +DI  WNAM+  Y  + C E+A   +
Sbjct: 653 GVETDVFVGTAVVSFYGKCEAVEDARQVFDRILDKDIVCWNAMIGAYAQNHCEEKAFALY 712

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
           ++M  + + PN +T I LL++CS    +  G S+  +     G +        ++++  +
Sbjct: 713 LEMVENQMPPNDVTLITLLDSCSSTCKMERGSSLH-REAAARGYLSHTSVVNALINMYAK 771

Query: 526 -AGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
             G L+ A    +S+  + N++ W +++AA
Sbjct: 772 CCGNLEAAQTAFESVASK-NVVSWSSIVAA 800



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 157/508 (30%), Positives = 252/508 (49%), Gaps = 29/508 (5%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           M   G   D  T+   + ACA +  +  GK+IH   + +GL     +SN+L+ MY +CGS
Sbjct: 1   MDLEGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGS 60

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           +  AR  FD MP RD++SW+ MI  Y +    ++A+++    R    +P EV   S+++ 
Sbjct: 61  VEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNA 120

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVA------IATALIDMYSKCGNLAYAKQLFNRL 235
                D+  G+ +H        +  LG +      +   LI MYS CG+L  A  +F   
Sbjct: 121 CFASGDLKFGRMLH--------EHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWS 172

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
            +  V +WT +I+ Y R  ++      +++M +E +  +EIT L+++  C  +  L+ GK
Sbjct: 173 FRPDVCTWTTVIAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGK 232

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKC-REIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
            +H   L +G +FSL M N+L+ MYGKC R    AR +F  +    V+ W+A I+AY Q 
Sbjct: 233 HVHRLALGSGLDFSLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQH 292

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
               K FEL   M +  V+PN  T+  +L  C   GA E G+ +H  +       +  + 
Sbjct: 293 WEAIKTFEL---MNLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVL 349

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
            A   +YAKC  V  A R+FS    +D   WNA+++ Y   G   +A+     M+  G  
Sbjct: 350 NAAASLYAKCSRVADASRVFSSIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFV 409

Query: 475 PNGITFIGLLNACSHAGL---------VTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
           P+ ITFI +L +CS + L         +T+G+ V  +M+   GL         +V + GR
Sbjct: 410 PDDITFITILYSCSQSALLKQYGNSKSLTDGRQVHSQMISN-GLDGDTYLGNLLVQMYGR 468

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            G LD+A    + +  R N+  W  L++
Sbjct: 469 CGSLDDARAAFQGIHQR-NVFSWTILIS 495



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 264/529 (49%), Gaps = 17/529 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++T Y ++     A+ +YA+ R  G++ D  T  ++L AC        G+ +H 
Sbjct: 76  LISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASGDLKFGRMLHE 135

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +      D  V N LI MYS+CGSL  A  +F+     DV +W+T+I  Y R G  E 
Sbjct: 136 HFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIAAYTRHGKLEC 195

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A     +M    +R +E+  ++++   + +  ++ GK +H   + +  D    + +  +L
Sbjct: 196 AFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLD--FSLRMENSL 253

Query: 216 IDMYSKCG-NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           I MY KC  +   A+++F R+++ SV+SW+  I+ Y    +  E ++ F  M  E V P+
Sbjct: 254 ISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAY---GQHWEAIKTFELMNLEGVKPN 310

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
             T+ S++  C  VG  + G+ +HA +L   +  +  + NA   +Y KC  +  A  +F 
Sbjct: 311 ATTLTSVLRACATVGAHEQGRRIHALVLAGPYTQNTTVLNAAASLYAKCSRVADASRVFS 370

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            +  KD + WNA++SAYA+      A  L   M+V    P+++T + +L  C+++  L+ 
Sbjct: 371 SIPCKDAVSWNAIVSAYAKQGLFRDAIFLSRQMQVEGFVPDDITFITILYSCSQSALLKQ 430

Query: 395 ---------GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
                    G+ +H+ +   GL+ D  L   LV MY +CG ++ A   F     R++  W
Sbjct: 431 YGNSKSLTDGRQVHSQMISNGLDGDTYLGNLLVQMYGRCGSLDDARAAFQGIHQRNVFSW 490

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
             +++    +G   E L     M+  G + N ITFI LL ACS  G ++ GK++ ++ + 
Sbjct: 491 TILISLLVQNGEASEGLELLKSMDLEGTEANKITFISLLGACSVTGDLSLGKTIHER-IR 549

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
             GL   I     ++++      LDEA  + + M  R +++ W  +++A
Sbjct: 550 TKGLESDIITSNALLNMYTTCESLDEARLVFERMVFR-DVVSWTIIISA 597



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 158/291 (54%), Gaps = 3/291 (1%)

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
           E V   EIT+L+ +  C  +G    GK +HA IL +G   S+ ++N+LV MYGKC  +  
Sbjct: 4   EGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGSVEE 63

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           AR  FD M  +D++ WNA+I+ YAQ  C  +A +L+ + ++   +P+EVT   LL+ C  
Sbjct: 64  ARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFA 123

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
           +G L+ G+ LH +        D I+   L+ MY+ CG ++ A  +F  +   D+C W  +
Sbjct: 124 SGDLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTV 183

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +A Y  HG  E A   +  M + G++ N ITF+ +L+ CS   ++  GK V  ++  G G
Sbjct: 184 IAAYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVH-RLALGSG 242

Query: 509 LVPKIEHYGCMVDLLGRAGL-LDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           L   +     ++ + G+     DEA E+   +  RP++I W A +AA   H
Sbjct: 243 LDFSLRMENSLISMYGKCSRHPDEAREVFLRIS-RPSVISWSAFIAAYGQH 292



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 190/389 (48%), Gaps = 18/389 (4%)

Query: 172 EVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI--ATALIDMYSKCGNLAYAK 229
           E+ +++ VS  A + D   GK IHA ++ +     LG ++  + +L+ MY KCG++  A+
Sbjct: 10  EITLLNAVSACAALGDSLQGKQIHARILSS----GLGASVLLSNSLVYMYGKCGSVEEAR 65

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
             F+R+ +  ++SW  MI+ Y +     + ++L+A    E   P E+T  SL+  C   G
Sbjct: 66  NAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNACFASG 125

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
            L+ G+ LH + L   F     + N L+ MY  C  +  A  +F+     DV  W  VI+
Sbjct: 126 DLKFGRMLHEHFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFEWSFRPDVCTWTTVIA 185

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
           AY +   ++ AF  +  M    +R NE+T + +L  C+    LE GK +H      GL+ 
Sbjct: 186 AYTRHGKLECAFATWSKMHQEGLRSNEITFLTVLDTCSSLEVLETGKHVHRLALGSGLDF 245

Query: 410 DVILKTALVDMYAKCG-DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            + ++ +L+ MY KC    + A  +F       +  W+A +A YG H    EA+  F  M
Sbjct: 246 SLRMENSLISMYGKCSRHPDEAREVFLRISRPSVISWSAFIAAYGQHW---EAIKTFELM 302

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM---VDLLGR 525
              GVKPN  T   +L AC+  G   +G+ +   ++ G    P  ++   +     L  +
Sbjct: 303 NLEGVKPNATTLTSVLRACATVGAHEQGRRIHALVLAG----PYTQNTTVLNAAASLYAK 358

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
              + +A  +  S+P + + + W A+++A
Sbjct: 359 CSRVADASRVFSSIPCK-DAVSWNAIVSA 386



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 159/325 (48%), Gaps = 11/325 (3%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           +   +  +  ++++Y     P  AL +Y  M +  S  D  T+ ++L+ACA +     GK
Sbjct: 584 VFRDVVSWTIIISAYAHAGYPLEALQLYRRMEQEFSRPDAVTLISVLEACASLRALVEGK 643

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            IH   + +G++ D +V  A++  Y +C ++  AR +FD + ++D+V W+ MI  Y +  
Sbjct: 644 AIHERIVASGVETDVFVGTAVVSFYGKCEAVEDARQVFDRILDKDIVCWNAMIGAYAQNH 703

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
             E+A  +  EM    + P++V +I+++   +    ++ G ++H       +      ++
Sbjct: 704 CEEKAFALYLEMVENQMPPNDVTLITLLDSCSSTCKMERGSSLHREAA--ARGYLSHTSV 761

Query: 212 ATALIDMYSK-CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
             ALI+MY+K CGNL  A+  F  +   +VVSW+ +++ Y R  E +    LF  M ++ 
Sbjct: 762 VNALINMYAKCCGNLEAAQTAFESVASKNVVSWSSIVAAYARNGEEDRARNLFWTMNQDG 821

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILR----NGFEFSLAMANALVDMYGKCREI 326
           V P+ +T  S++  C   G    G W  +Y L     +  E +      +V++  K   +
Sbjct: 822 VLPNIVTFTSVLHACSHAGLADEG-W--SYFLSMQGDHHLEPTPEHYGCMVNLLAKSGRV 878

Query: 327 RSARTLFDGMKSK-DVMIWNAVISA 350
           + A +    M  + D   W +++ A
Sbjct: 879 KQAASFMSAMPVQPDASAWRSLLGA 903



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 95/194 (48%), Gaps = 6/194 (3%)

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           M +  V  +E+T++  +S C   G    GK +H  I   GL   V+L  +LV MY KCG 
Sbjct: 1   MDLEGVPGDEITLLNAVSACAALGDSLQGKQIHARILSSGLGASVLLSNSLVYMYGKCGS 60

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           V  A   F     RD+  WNAM+  Y  H CG++A+  +      G KP+ +TF  LLNA
Sbjct: 61  VEEARNAFDRMPERDLISWNAMITVYAQHECGKQAIQLYAYSRLEGTKPDEVTFASLLNA 120

Query: 487 CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC--MVDLLGRAGLLDEAHEMIKSMPLRPN 544
           C  +G +  G+ + +   H LG     +   C  ++ +    G LD+A  + +    RP+
Sbjct: 121 CFASGDLKFGRMLHE---HFLGTSFVSDQIVCNGLISMYSDCGSLDDATAVFE-WSFRPD 176

Query: 545 MIVWGALLAASKLH 558
           +  W  ++AA   H
Sbjct: 177 VCTWTTVIAAYTRH 190


>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  363 bits (932), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 213/591 (36%), Positives = 327/591 (55%), Gaps = 63/591 (10%)

Query: 82  AQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR------ 135
           A++LMT    EI             ++ N LI +Y +C  L  AR LFD MP R      
Sbjct: 39  ARILMTQFSMEI-------------FIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWN 85

Query: 136 -------------------------DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRP 170
                                    D  SW++M+ G+ +    EE+LE   +M   D   
Sbjct: 86  SLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLL 145

Query: 171 SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQ 230
           +E +  S +S  A + D+++G  +HA V ++       V + +ALIDMYSKCG++A A++
Sbjct: 146 NEYSFGSALSACAGLMDLNMGTQVHALVSKS--RYSTDVYMGSALIDMYSKCGSVACAEE 203

Query: 231 LFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGG 290
           +F+ + + ++V+W  +I+ Y +    +E + +F  M++  + P E+T+ S++  C  +  
Sbjct: 204 VFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCA 263

Query: 291 LQLGKWLHAYILR-NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
           L+ G  +HA +++ N F   L + NALVDMY KC ++  AR +FD M  ++V+   +++S
Sbjct: 264 LKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVS 323

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG----ALEMGK-------WL 398
            YA+A  +  A  +F  M     + N V+   L++  T+ G    AL + +       W 
Sbjct: 324 GYARAASVKAARFMFSKM----TQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWP 379

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
             Y     L+ D+ +  +L+DMY KCG +    R+F +   RD   WNA++ GY  +G G
Sbjct: 380 THYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYG 439

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F  M   G KP+ +T IG+L ACSHAGLV EG+  F  M    GL+P  +HY C
Sbjct: 440 AEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEEH-GLIPLKDHYTC 498

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLLGRAG L+EA  +I++MP+ P+ +VWG+LLAA K+H N  MG+ AA ++LEI+P N
Sbjct: 499 MVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWN 558

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            G  VL+SN+YA   RW DV  VR++M++  V K+PG S +EV   VH F+
Sbjct: 559 SGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVESRVHVFL 609



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/429 (30%), Positives = 226/429 (52%), Gaps = 15/429 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+V+ + ++++   +L  +  M +    ++ ++  + L ACA ++  ++G ++H    
Sbjct: 115 WNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVS 174

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+    D Y+ +ALI MYS+CGS+  A  +F  M  R++V+W+++I  Y + G   EALE
Sbjct: 175 KSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALE 234

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V   M    + P EV + S+VS  A +  +  G  IHA VV+  K     + +  AL+DM
Sbjct: 235 VFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRD-DLVLGNALVDM 293

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KC  +  A+++F+R++  +VVS T M+SGY R   +     +F++M + NV      I
Sbjct: 294 YAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALI 353

Query: 279 LSLIIECGFVGGLQLGK-------WLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
                       L+L +       W   Y   N  +  + + N+L+DMY KC  I     
Sbjct: 354 AGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLKSDIFVGNSLIDMYMKCGSIEDGSR 413

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +F+ MK +D + WNA+I  YAQ     +A ++F  M V   +P+ VTM+G+L  C+ AG 
Sbjct: 414 VFEKMKERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGL 473

Query: 392 LEMGKWLHTYIEKQGLEVDVILK---TALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNA 447
           +E G+     +E+ GL   + LK   T +VD+  + G +N A  L     +  D  +W +
Sbjct: 474 VEEGRHYFFSMEEHGL---IPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGS 530

Query: 448 MMAGYGMHG 456
           ++A   +HG
Sbjct: 531 LLAACKVHG 539



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 137/308 (44%), Gaps = 31/308 (10%)

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           ++ +   P+      L+  C      +  + +HA IL   F   + + N L+D+YGKC  
Sbjct: 6   LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65

Query: 326 IRSARTLFDGMKSKDVMIWNAVI-------------------------------SAYAQA 354
           +  AR LFD M  ++   WN++I                               S +AQ 
Sbjct: 66  LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
              +++ E F+ M       NE +    LS C     L MG  +H  + K     DV + 
Sbjct: 126 DRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMG 185

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
           +AL+DMY+KCG V  A  +FS  I R++  WN+++  Y  +G   EAL  FV M  SG++
Sbjct: 186 SALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLE 245

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
           P+ +T   +++AC+    + EG  +  ++V        +     +VD+  +   ++EA  
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305

Query: 535 MIKSMPLR 542
           +   M +R
Sbjct: 306 VFDRMSIR 313



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 158/348 (45%), Gaps = 59/348 (16%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NSL+T Y +N   S AL ++  M  +G E D  T+ +++ ACA +     G +IH 
Sbjct: 213 LVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHA 272

Query: 96  FAIK-NGLDGDAYVSNALIQMYSEC-------------------------------GSLV 123
             +K N    D  + NAL+ MY++C                                S+ 
Sbjct: 273 RVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVK 332

Query: 124 SARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFA 183
           +AR++F +M  R+VVSW+ +I GY + G  EEAL + R ++   I P+     +++    
Sbjct: 333 AARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLL---- 388

Query: 184 DVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSW 243
                                 K  + +  +LIDMY KCG++    ++F ++ +   VSW
Sbjct: 389 ----------------------KSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSW 426

Query: 244 TVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
             +I GY +     E +++F +M+     P  +T++ ++  C   G ++ G+     +  
Sbjct: 427 NAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE 486

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
           +G          +VD+ G+   +  A+ L + M  + D ++W ++++A
Sbjct: 487 HGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAA 534


>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570 [Vitis vinifera]
          Length = 607

 Score =  363 bits (932), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 202/576 (35%), Positives = 323/576 (56%), Gaps = 8/576 (1%)

Query: 63  RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSL 122
           RK  S      IP I++   Q++          F  K    G + ++  LI+ Y   G +
Sbjct: 4   RKLLSTTHFHPIPLIVRNSIQLVQNCTTPPNPPFIPK----GPSVLATTLIKSYFGKGLI 59

Query: 123 VSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLF 182
             AR LFDEMP RDVV+W+ MI GY        A  V  EM   ++ P+   + S++   
Sbjct: 60  GEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKAC 119

Query: 183 ADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCG-NLAYAKQLFNRLNQNSVV 241
             +  +  G+ +H   +++  D    + +  AL+DMY+ C  ++  A  +F  ++  + V
Sbjct: 120 KGMKCLSYGRLVHGLAIKHGLDGF--IYVDNALMDMYATCCVSMDDACMVFRGIHLKNEV 177

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           SWT +I+GY   ++   G+R+F +M+ E V  +  +    +  C  +G    G+ LHA +
Sbjct: 178 SWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAV 237

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
            ++GFE +L + N+++DMY +C     A   F  M  +D++ WN +I+ Y +++  +  +
Sbjct: 238 TKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSNPTESLY 297

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
            +F  M+     PN  T   +++ C     L  G+ +H  I ++GL+ ++ L  AL+DMY
Sbjct: 298 -VFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMY 356

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
           +KCG++  ++++F     RD+  W AMM GYG HG GEEA+  F  M RSG++P+ + F+
Sbjct: 357 SKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFM 416

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
            +L+ACSHAGLV EG   F  MV    + P  E YGC+VDLLGRAG ++EA+E+I+SMP 
Sbjct: 417 AILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPF 476

Query: 542 RPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGV 601
           +P+  VWG  L A K H  P++G++AA +IL++ P   G  V++SNIYA   +W + A +
Sbjct: 477 KPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGEFARL 536

Query: 602 RRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWK 637
           R++MK +  KKE G S VEV   V+ F+ G  V  K
Sbjct: 537 RKLMKRMGNKKETGRSWVEVGNHVYSFVVGDEVGSK 572



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 212/420 (50%), Gaps = 6/420 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +  ++  Y   N  + A  ++  M     + + FTI ++LKAC  +     G+ +HG AI
Sbjct: 77  WTVMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAI 136

Query: 99  KNGLDGDAYVSNALIQMYSECG-SLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           K+GLDG  YV NAL+ MY+ C  S+  A  +F  +  ++ VSW+T+I GY         L
Sbjct: 137 KHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGL 196

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            V R+M   ++  +  +    V     +     G+ +HA V ++  +  L   +  +++D
Sbjct: 197 RVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNL--PVMNSILD 254

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY +C   + A + F  +NQ  +++W  +I+GY R N   E + +F+ M  E   P+  T
Sbjct: 255 MYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSNP-TESLYVFSMMESEGFSPNCFT 313

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             S++  C  +  L  G+ +H  I+R G + +LA++NAL+DMY KC  I  +  +F GM 
Sbjct: 314 FTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMS 373

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-K 396
            +D++ W A++  Y      ++A ELF  M  S +RP+ V  + +LS C+ AG ++ G +
Sbjct: 374 RRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLR 433

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMH 455
           +    +    +  D  +   +VD+  + G V  AY L     ++ D C+W   +     H
Sbjct: 434 YFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAH 493



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 174/361 (48%), Gaps = 11/361 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+  Y   +     L ++  M     E++ F+    ++AC  +     G+++H    
Sbjct: 179 WTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVT 238

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G + +  V N+++ MY  C     A   F EM  RD+++W+T+I GY R   P E+L 
Sbjct: 239 KHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIAGYERSN-PTESLY 297

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V   M      P+     S+++  A +A ++ G+ IH  ++R   D  L  A++ ALIDM
Sbjct: 298 VFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNL--ALSNALIDM 355

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSKCGN+A + Q+F  +++  +VSWT M+ GY       E V LF +M+   + P  +  
Sbjct: 356 YSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVF 415

Query: 279 LSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++++  C   G +  G ++    +          +   +VD+ G+  ++  A  L + M 
Sbjct: 416 MAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMP 475

Query: 338 SK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
            K D  +W   + A  +AH      +L  H ++  +RP+   M G   + +   A + GK
Sbjct: 476 FKPDECVWGPFLGA-CKAHTFPNLGKLAAH-RILDLRPH---MAGTYVMLSNIYAAD-GK 529

Query: 397 W 397
           W
Sbjct: 530 W 530



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 108/191 (56%), Gaps = 5/191 (2%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYA 60
           + + N  L++     C +   +  ++ +  ++I     +N+L+  Y ++N P+ +L +++
Sbjct: 246 LPVMNSILDMYCRCSCFSEANRYFYEMNQRDLIT----WNTLIAGYERSN-PTESLYVFS 300

Query: 61  FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECG 120
            M   G   + FT  +I+ ACA +   + G++IHG  I+ GLDG+  +SNALI MYS+CG
Sbjct: 301 MMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCG 360

Query: 121 SLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
           ++  +  +F  M  RD+VSW+ M+ GY   G  EEA+E+  +M    IRP  V  ++++S
Sbjct: 361 NIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILS 420

Query: 181 LFADVADVDLG 191
             +    VD G
Sbjct: 421 ACSHAGLVDEG 431


>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 205/592 (34%), Positives = 330/592 (55%), Gaps = 14/592 (2%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           NP ++    +    K+ + S AL +   +             ++L+ C +VL  + G +I
Sbjct: 85  NPFSK----ILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQI 140

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGS-LVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           H   IK+GL+ D +V N+L+ +Y + G+     R +FD +  +DV+SW++MI GY R G 
Sbjct: 141 HAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGK 200

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
           P  +LE+  +M    + P+   + +++   +++ D+ LG+  H  V+    D      IA
Sbjct: 201 PMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNY--VIA 258

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN-V 271
           +ALIDM+ +   L  A+QLF+ L +   + WT +IS   R +  +E +R F  M  ++ +
Sbjct: 259 SALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGM 318

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P   T  +++  CG +G L+ GK +HA ++  GF  ++ + ++LVDMYGKC  +  ++ 
Sbjct: 319 CPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQR 378

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +FD M  K+ + W+A++  Y Q        ++F  M+    + +      +L  C    A
Sbjct: 379 IFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKME----KVDLYCFGTILRTCAGLAA 434

Query: 392 LEMGKWLH-TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           +  GK +H  YI K G   DVI+++ALVD+YAKCG +  A  +F +   R++  WN+M+ 
Sbjct: 435 VRQGKEVHCQYIRKGGWR-DVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIG 493

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           G+  +G GEEAL  F  M + G+KP+ I+FIG+L ACSH GLV EG+  F  M    G+ 
Sbjct: 494 GFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIK 553

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
             IEHY CMVDLLGRAGLL+EA  +I++   R +  +W ALL A     N  + E  A +
Sbjct: 554 VGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKR 613

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
           ++E+EP  +   VL++N+Y    RWND   +RR+MK+  V K PG S +E  
Sbjct: 614 VMELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETK 665



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 241/466 (51%), Gaps = 38/466 (8%)

Query: 15  QCHAHIIKTHFKFS----------YTNIIN--PLTR-------------YNSLVTSYIKN 49
           Q HAH+IK+  +F           Y  +    P TR             + S+++ Y++ 
Sbjct: 139 QIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRV 198

Query: 50  NKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVS 109
            KP ++L ++  M   G E + FT+  ++KAC+++    LG+  HG  +  G D +  ++
Sbjct: 199 GKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIA 258

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDI 168
           +ALI M+    +L  AR LFDE+   D + W+++I    R    +EAL     M R   +
Sbjct: 259 SALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGM 318

Query: 169 RPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALIDMYSKCGNLA 226
            P      ++++   ++  +  GK +HA V+    C +    V + ++L+DMY KCG++ 
Sbjct: 319 CPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGN----VVVESSLVDMYGKCGSVG 374

Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
            ++++F+R+   + VSW+ ++ GY +  +    +++F +M + +++       +++  C 
Sbjct: 375 ESQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDLY----CFGTILRTCA 430

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
            +  ++ GK +H   +R G    + + +ALVD+Y KC  I  A+T+FD M  ++++ WN+
Sbjct: 431 GLAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNS 490

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-WLHTYIEKQ 405
           +I  +AQ    ++A  +F  M    ++P+ ++ +G+L  C+  G ++ G+ +  +  +  
Sbjct: 491 MIGGFAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDY 550

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMA 450
           G++V +   + +VD+  + G +  A  L   + +R D  +W A++ 
Sbjct: 551 GIKVGIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLG 596


>gi|357168001|ref|XP_003581434.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Brachypodium distachyon]
          Length = 757

 Score =  363 bits (931), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 196/598 (32%), Positives = 335/598 (56%), Gaps = 5/598 (0%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           NP++ + S++ ++ +N + + AL +++ M ++G+  D F + + ++ACA++    +G+++
Sbjct: 106 NPVS-WASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQV 164

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           H  A+K+    D  V NAL+ MYS+ G +     LF  M  +D +SW ++I G+ + G  
Sbjct: 165 HAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCE 224

Query: 154 EEALEVMREMRFMDIR-PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            EAL++ REM    +  P+E    S+ S    +  ++ G+ IH+  V+   D        
Sbjct: 225 MEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQIHSLSVKYRLDHN--SYAG 282

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            +L DMY++C  L  AK++F  ++   +VSW  +I+       ++E + L +EM    + 
Sbjct: 283 CSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACSVEGLLSEAMVLLSEMRGSGLR 342

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P  IT+  L+  C     +Q G+ +H+Y+++ G +  +++ N+L+ MY +C +  SA  +
Sbjct: 343 PDGITVRGLLCACVGCDAIQHGRLMHSYLVKLGLDGDVSVCNSLLSMYARCMDFSSAMDV 402

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F   + +DV+ WN++++A  Q   ++  F+LF  ++ S    + +++  +LS   E G  
Sbjct: 403 FHETRDRDVVTWNSILTACVQHQHLEVVFKLFNLLQRSLPSLDRISLNNVLSASAELGYF 462

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAG 451
           EM K +HT   K GL  D +L   L+D YAKCG ++ A +LF       D+  W++++ G
Sbjct: 463 EMVKQVHTCTFKVGLVNDTMLSNGLIDTYAKCGSLDDAVKLFEMMGTNSDVFSWSSLIVG 522

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           Y   G   +AL  F  M   GV+PN +TF+G+L ACS  GLV EG   +  M    G++P
Sbjct: 523 YAQSGYPRKALDLFARMRNLGVRPNHVTFVGVLTACSRVGLVDEGCYYYSIMEPEHGVLP 582

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
             EH  C++DLL RAG L EA + +  MP  P++++W  LLA SK H +  MG  AA  I
Sbjct: 583 TREHCSCVIDLLARAGRLTEAAKFVDQMPFEPDIVMWKTLLAGSKTHNDVEMGRRAAEGI 642

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           L I+P +    VL+ NIY+ +  WN+ A +++ M+   VKK PG S V++ G +  FI
Sbjct: 643 LNIDPSHSAAYVLLCNIYSASGDWNEFARLKKAMRSSGVKKSPGKSWVKLKGELKVFI 700



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 237/446 (53%), Gaps = 4/446 (0%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           ++N LI MY  C +  SAR +FDEMP ++ VSW+++I  + +     +AL +   M    
Sbjct: 78  LNNHLITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSMLRSG 137

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
             P + A+ S V   A++ D+ +G+ +HA  +++     L   +  AL+ MYSK G +A 
Sbjct: 138 TAPDQFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDL--IVQNALVTMYSKSGLVAD 195

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV-FPSEITILSLIIECG 286
              LF R+ +   +SW  +I+G+ +     E +++F EM+ E +  P+E    S+   CG
Sbjct: 196 GFLLFGRMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACG 255

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
            +G L+ G+ +H+  ++   + +     +L DMY +C+++ SA+ +F G+ + D++ WN+
Sbjct: 256 VLGSLEYGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNS 315

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           +I+A +    + +A  L   M+ S +RP+ +T+ GLL  C    A++ G+ +H+Y+ K G
Sbjct: 316 IINACSVEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVKLG 375

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
           L+ DV +  +L+ MYA+C D + A  +F E   RD+  WN+++     H   E     F 
Sbjct: 376 LDGDVSVCNSLLSMYARCMDFSSAMDVFHETRDRDVVTWNSILTACVQHQHLEVVFKLFN 435

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRA 526
            ++RS    + I+   +L+A +  G     K V       +GLV        ++D   + 
Sbjct: 436 LLQRSLPSLDRISLNNVLSASAELGYFEMVKQVH-TCTFKVGLVNDTMLSNGLIDTYAKC 494

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALL 552
           G LD+A ++ + M    ++  W +L+
Sbjct: 495 GSLDDAVKLFEMMGTNSDVFSWSSLI 520



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 169/347 (48%), Gaps = 3/347 (0%)

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LI MY +C     A+ +F+ +   + VSW  +I+ + +     + + LF+ M+     P 
Sbjct: 82  LITMYGRCAAPESARLVFDEMPAKNPVSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPD 141

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           +  + S +  C  +G + +G+ +HA  +++     L + NALV MY K   +     LF 
Sbjct: 142 QFALGSTVRACAELGDIGVGRQVHAQAMKSENGSDLIVQNALVTMYSKSGLVADGFLLFG 201

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV-RPNEVTMVGLLSLCTEAGALE 393
            M+ KD + W ++I+ +AQ  C  +A ++F  M    +  PNE     + S C   G+LE
Sbjct: 202 RMREKDPISWGSIIAGFAQQGCEMEALQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLE 261

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            G+ +H+   K  L+ +     +L DMYA+C  +  A R+F      D+  WN+++    
Sbjct: 262 YGEQIHSLSVKYRLDHNSYAGCSLSDMYARCKKLESAKRVFYGIDAPDLVSWNSIINACS 321

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
           + G   EA++   +M  SG++P+GIT  GLL AC     +  G+ +   +V  LGL   +
Sbjct: 322 VEGLLSEAMVLLSEMRGSGLRPDGITVRGLLCACVGCDAIQHGRLMHSYLVK-LGLDGDV 380

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
                ++ +  R      A ++      R +++ W ++L A   H++
Sbjct: 381 SVCNSLLSMYARCMDFSSAMDVFHETRDR-DVVTWNSILTACVQHQH 426



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 136/278 (48%), Gaps = 14/278 (5%)

Query: 285 CGFVGGLQLGKWLHAYILRN---GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           C  +  L LG  +H ++L +       +  + N L+ MYG+C    SAR +FD M +K+ 
Sbjct: 48  CSRLRALCLGCLVHRHLLASPDPNLVRNTVLNNHLITMYGRCAAPESARLVFDEMPAKNP 107

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           + W +VI+A+AQ      A  LF  M  S   P++  +   +  C E G + +G+ +H  
Sbjct: 108 VSWASVIAAHAQNRRSTDALGLFSSMLRSGTAPDQFALGSTVRACAELGDIGVGRQVHAQ 167

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
             K     D+I++ ALV MY+K G V   + LF     +D   W +++AG+   GC  EA
Sbjct: 168 AMKSENGSDLIVQNALVTMYSKSGLVADGFLLFGRMREKDPISWGSIIAGFAQQGCEMEA 227

Query: 462 LIFFVDMERSGV-KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH---YG 517
           L  F +M   G+  PN   F  + +AC   G +  G+      +H L +  +++H    G
Sbjct: 228 LQIFREMVAEGMHHPNEFHFGSVFSACGVLGSLEYGEQ-----IHSLSVKYRLDHNSYAG 282

Query: 518 C-MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           C + D+  R   L+ A  +   +   P+++ W +++ A
Sbjct: 283 CSLSDMYARCKKLESAKRVFYGID-APDLVSWNSIINA 319


>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
          Length = 716

 Score =  362 bits (930), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 197/584 (33%), Positives = 324/584 (55%), Gaps = 6/584 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKN---GSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           Y +++   ++  + + A+ ++  MR+        D+F +   LKAC +      G+ +H 
Sbjct: 131 YGAMLWCLVQTERHADAVALHHDMRRRRPCPEAQDDFVLSLALKACIRSAEYSYGRSLHC 190

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            AIK G   D +V N+L+ MY++   L  AR +F+ +P+R+VVSW++MI G  + G   +
Sbjct: 191 DAIKVG-GADGFVMNSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASD 249

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            L +  +MR  ++ PSE  + ++++  + +  +  G+ +H  V++  +       I+ AL
Sbjct: 250 GLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIK--QGLMSNSFISAAL 307

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY KCG L +A+ +F+ L+   +V WT MI GY +     + +RLF +    N+ P+ 
Sbjct: 308 LDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNS 367

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T  +++     +  L LGK +H   ++ G      + NALVDMY KC+ +  A  +F  
Sbjct: 368 VTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGR 427

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           + +KDV+ WN++IS YA+ +  D A  LF  M +    P+ +++V  LS     G L +G
Sbjct: 428 ISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIG 487

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           K +H Y  K     ++ + TAL+++Y KCGD+  A R+F E   R+   W AM+ GYGM 
Sbjct: 488 KSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQ 547

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G    ++  F +M + GV PN I F  +L+ CSH+G+VT GK  FD M     + P ++H
Sbjct: 548 GDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKH 607

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y CMVD+L RAG L++A E I +MP++ +  VWGA L   +LH      E A  +++ + 
Sbjct: 608 YACMVDVLARAGNLEDALEFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMVLH 667

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           P+     VL+SN+Y     W+    +RR M+E  + K PG SSV
Sbjct: 668 PERPDLYVLISNLYTSNGMWDKSLAIRRWMQEKGLVKLPGCSSV 711



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 147/471 (31%), Positives = 236/471 (50%), Gaps = 19/471 (4%)

Query: 104 GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
           G       L+  Y+  G L SAR +FD  P  D  S+  M+    +     +A+ +  +M
Sbjct: 95  GSLRARTKLLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDM 154

Query: 164 RFMDIRPSEVAMISMVSLFA-----DVADVDLGKAIHACVVRNCKDEKLGVA---IATAL 215
           R    RP   A    V   A       A+   G+++H      C   K+G A   +  +L
Sbjct: 155 RRR--RPCPEAQDDFVLSLALKACIRSAEYSYGRSLH------CDAIKVGGADGFVMNSL 206

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+K  +L  A+++F R+   +VVSWT MISG ++    ++G+ LF +M ++NV PSE
Sbjct: 207 VDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSE 266

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            TI ++I  C  + GL  G+W+H  +++ G   +  ++ AL+DMY KC E+  AR +FD 
Sbjct: 267 YTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDE 326

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +   D+++W  +I  Y Q      A  LF+  + + + PN VT   +LS   +   L +G
Sbjct: 327 LSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLG 386

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           K +H    K GL    ++  ALVDMYAKC  V+ A R+F     +D+  WN+M++GY  +
Sbjct: 387 KSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAEN 446

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
             G++AL+ F  M   G  P+ I+ +  L+A    G +  GKS+    V     V  I  
Sbjct: 447 NMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKH-AFVSNIYV 505

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
              +++L  + G L  A  +   M  R N + W A++    +  + S G I
Sbjct: 506 DTALLNLYNKCGDLLSARRVFDEMNDR-NSVTWCAMIGGYGMQGD-SAGSI 554



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 193/376 (51%), Gaps = 9/376 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + +++  Y +N  P  AL ++   R      ++ T  T+L A AQ+    LGK IHG
Sbjct: 332 LVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHG 391

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+K GL     V NAL+ MY++C ++  A  +F  + N+DVV+W++MI GY    + ++
Sbjct: 392 LAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDD 451

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL + ++M      P  +++++ +S    + D+ +GK+IH   V++       + + TAL
Sbjct: 452 ALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSN--IYVDTAL 509

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +++Y+KCG+L  A+++F+ +N  + V+W  MI GY    +    + LF EM+++ V+P++
Sbjct: 510 LNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPND 569

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN--ALVDMYGKCREIRSARTLF 333
           I   S++  C   G +  GK     + ++ F  + +M +   +VD+  +   +  A    
Sbjct: 570 IAFTSILSTCSHSGMVTAGKRYFDSMAQH-FNITPSMKHYACMVDVLARAGNLEDALEFI 628

Query: 334 DGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS-LCTEAGA 391
           D M  + D  +W A +        +  A E    M V  + P    +  L+S L T  G 
Sbjct: 629 DNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMV--LHPERPDLYVLISNLYTSNGM 686

Query: 392 LEMGKWLHTYIEKQGL 407
            +    +  +++++GL
Sbjct: 687 WDKSLAIRRWMQEKGL 702


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 198/593 (33%), Positives = 329/593 (55%), Gaps = 8/593 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + SL+T        S  + ++  MR  G   + FT  ++L A A      LG+ +H  ++
Sbjct: 169 WTSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSV 228

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G     +V N+L+ MY++CG +  A+ +F+ M  RD+VSW+T++ G        EAL+
Sbjct: 229 KFGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQ 288

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  E R    + ++    +++ L A++  + L + +H+CV+++     L   + TAL D 
Sbjct: 289 LFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKH--GFHLTGNVMTALADA 346

Query: 219 YSKCGNLAYAKQLFN-RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           YSKCG LA A  +F+      +VVSWT +ISG I+  +I   V LF+ M E+ V P+E T
Sbjct: 347 YSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFT 406

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             +++     +    L   +HA +++  ++    +  AL+  Y K      A ++F  ++
Sbjct: 407 YSAMLKASLSI----LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIE 462

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT-EAGALEMGK 396
            KDV+ W+A++S +AQA   + A  LF  M +  ++PNE T+  ++  C   +  ++ G+
Sbjct: 463 QKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGR 522

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
             H    K      + + +ALV MY++ G+++ A  +F     RD+  WN+M++GY  HG
Sbjct: 523 QFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHG 582

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
              +A+  F  ME SG++ +G+TF+ ++  C+H GLV EG+  FD MV    + P +EHY
Sbjct: 583 YSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHY 642

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            CMVDL  RAG LDE   +I+ MP     +VW  LL A ++HKN  +G+ +A ++L +EP
Sbjct: 643 ACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGACRVHKNVELGKFSADKLLSLEP 702

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            +    VL+SNIYA A +W +   VR++M   +VKKE G S +++   VH FI
Sbjct: 703 HDSSTYVLLSNIYAAAGKWKERDEVRKLMDYRKVKKEAGCSWIQIKNKVHSFI 755



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 260/529 (49%), Gaps = 25/529 (4%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           N ++  Y +       L+ ++  R+ G  VD+ T+  +LKAC  V    LG+++H   +K
Sbjct: 68  NRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVK 127

Query: 100 NGLD-GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            G D G+     +L+ MY +CGS+     +F+ MP ++VV+W++++ G     +  E + 
Sbjct: 128 CGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGCAHAQMHSEVMA 187

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALID 217
           +   MR   I P+     S++S  A    +DLG+ +HA  V+  C+     V +  +L++
Sbjct: 188 LFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVKFGCRSS---VFVCNSLMN 244

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-EGVRLFAEMIEENVFPSEI 276
           MY+KCG +  AK +FN +    +VSW  +++G ++ NE   E ++LF E        ++ 
Sbjct: 245 MYAKCGLVEDAKSVFNWMETRDMVSWNTLMAG-LQLNECELEALQLFHESRATMGKMTQS 303

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD-G 335
           T  ++I  C  +  L L + LH+ +L++GF  +  +  AL D Y KC E+  A  +F   
Sbjct: 304 TYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMT 363

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
             S++V+ W A+IS   Q   I  A  LF  M+  +V PNE T   +L    +A    + 
Sbjct: 364 TGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAML----KASLSILP 419

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H  + K   +    + TAL+  Y+K G    A  +F     +D+  W+AM++ +   
Sbjct: 420 PQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQA 479

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACS--HAGLVTEGKSVFDKMVHGLGLVPKI 513
           G  E A   F  M   G+KPN  T   +++AC+   AG V +G+       H + +  + 
Sbjct: 480 GDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAG-VDQGRQ-----FHAISIKYRY 533

Query: 514 EHYGC----MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
               C    +V +  R G +D A  + +    R +++ W ++++    H
Sbjct: 534 HDAICVSSALVSMYSRKGNIDSAQIVFERQTDR-DLVSWNSMISGYAQH 581



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 215/439 (48%), Gaps = 25/439 (5%)

Query: 125 ARYLFDEMPNRDV-VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFA 183
           ARY  DE+P RD  V  + ++  Y R G+  E L+     R   +      +  ++    
Sbjct: 51  ARYPLDEIPRRDAAVGANRVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACR 110

Query: 184 DVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSW 243
            V D  LG+ +H C+   C  ++  V+  T+L+DMY KCG++    ++F  + + +VV+W
Sbjct: 111 SVPDRVLGEQLH-CLCVKCGHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTW 169

Query: 244 TVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
           T +++G       +E + LF  M  E ++P+  T  S++      G L LG+ +HA  ++
Sbjct: 170 TSLLTGCAHAQMHSEVMALFFRMRAEGIWPNPFTFASVLSAVASQGALDLGQRVHAQSVK 229

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
            G   S+ + N+L++MY KC  +  A+++F+ M+++D++ WN +++      C  +A +L
Sbjct: 230 FGCRSSVFVCNSLMNMYAKCGLVEDAKSVFNWMETRDMVSWNTLMAGLQLNECELEALQL 289

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F   + +  +  + T   ++ LC     L + + LH+ + K G  +   + TAL D Y+K
Sbjct: 290 FHESRATMGKMTQSTYATVIKLCANLKQLALARQLHSCVLKHGFHLTGNVMTALADAYSK 349

Query: 424 CGDVNGAYRLFSEAI-YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
           CG++  A  +FS     R++  W A+++G   +G    A++ F  M    V PN  T+  
Sbjct: 350 CGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSA 409

Query: 483 LLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRA--------GLLDEAHE 534
           +L A           S+    +H   +    +H    +  +G A        G  ++A  
Sbjct: 410 MLKA---------SLSILPPQIHAQVIKTNYQH----IPFVGTALLASYSKFGSTEDALS 456

Query: 535 MIKSMPLRPNMIVWGALLA 553
           + K M  + +++ W A+L+
Sbjct: 457 IFK-MIEQKDVVAWSAMLS 474



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 204/424 (48%), Gaps = 10/424 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N+L+     N     AL ++   R    ++   T  T++K CA +    L +++H 
Sbjct: 267 MVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQLALARQLHS 326

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFD-EMPNRDVVSWSTMIRGYHRGGLPE 154
             +K+G      V  AL   YS+CG L  A  +F     +R+VVSW+ +I G  + G   
Sbjct: 327 CVLKHGFHLTGNVMTALADAYSKCGELADALNIFSMTTGSRNVVSWTAIISGCIQNGDIP 386

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
            A+ +   MR   + P+E    +M+     +    L   IHA V++   + +    + TA
Sbjct: 387 LAVVLFSRMREDRVMPNEFTYSAMLKASLSI----LPPQIHAQVIKT--NYQHIPFVGTA 440

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+  YSK G+   A  +F  + Q  VV+W+ M+S + +  +      LF +M  + + P+
Sbjct: 441 LLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLFNKMAIQGIKPN 500

Query: 275 EITILSLIIECGF-VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           E TI S+I  C     G+  G+  HA  ++  +  ++ +++ALV MY +   I SA+ +F
Sbjct: 501 EFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSRKGNIDSAQIVF 560

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG-AL 392
           +    +D++ WN++IS YAQ     KA E F  M+ S ++ + VT + ++  CT  G  +
Sbjct: 561 ERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAVIMGCTHNGLVV 620

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM-WNAMMAG 451
           E  ++  + +    +   +     +VD+Y++ G ++    L  +  +    M W  ++  
Sbjct: 621 EGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPAGAMVWRTLLGA 680

Query: 452 YGMH 455
             +H
Sbjct: 681 CRVH 684



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 175/376 (46%), Gaps = 19/376 (5%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           FS T     +  + ++++  I+N     A+ +++ MR++    + FT   +LKA   +  
Sbjct: 360 FSMTTGSRNVVSWTAIISGCIQNGDIPLAVVLFSRMREDRVMPNEFTYSAMLKASLSI-- 417

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
             L  +IH   IK       +V  AL+  YS+ GS   A  +F  +  +DVV+WS M+  
Sbjct: 418 --LPPQIHAQVIKTNYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSC 475

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFA-DVADVDLGKAIHACVVRNCKDE 205
           + + G  E A  +  +M    I+P+E  + S++   A   A VD G+  HA  ++    +
Sbjct: 476 HAQAGDCEGATYLFNKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHD 535

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
              + +++AL+ MYS+ GN+  A+ +F R     +VSW  MISGY +     + +  F +
Sbjct: 536 --AICVSSALVSMYSRKGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQ 593

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCR 324
           M    +    +T L++I+ C   G +  G+     ++R+     ++     +VD+Y +  
Sbjct: 594 MEASGIQMDGVTFLAVIMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAG 653

Query: 325 EIRSARTLFDGMK-SKDVMIWNAVISAYAQAHCIDKAFEL--FIHMKVSKVRPNEVTMVG 381
           ++    +L   M      M+W  ++ A      + K  EL  F   K+  + P++ +   
Sbjct: 654 KLDETMSLIRDMPFPAGAMVWRTLLGACR----VHKNVELGKFSADKLLSLEPHDSSTYV 709

Query: 382 LLSLCTEAGALEMGKW 397
           LLS    A     GKW
Sbjct: 710 LLSNIYAAA----GKW 721


>gi|15233482|ref|NP_192346.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75214457|sp|Q9XE98.1|PP303_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g04370
 gi|4982476|gb|AAD36944.1|AF069441_4 hypothetical protein [Arabidopsis thaliana]
 gi|7267194|emb|CAB77905.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656985|gb|AEE82385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  362 bits (930), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 190/555 (34%), Positives = 315/555 (56%), Gaps = 3/555 (0%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           T+L+  + VL     + +H FA+  G D D  V N+++ +Y +C  +  A+ LFD+M  R
Sbjct: 149 TLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR 208

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
           D+VSW+TMI GY   G   E L+++  MR   +RP +    + +S+   + D+++G+ +H
Sbjct: 209 DMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLH 268

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
             +V+   D  + + + TALI MY KCG    + ++   +    VV WTVMISG +R   
Sbjct: 269 CQIVKTGFD--VDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGR 326

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
             + + +F+EM++     S   I S++  C  +G   LG  +H Y+LR+G+       N+
Sbjct: 327 AEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNS 386

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP- 374
           L+ MY KC  +  +  +F+ M  +D++ WNA+IS YAQ   + KA  LF  MK   V+  
Sbjct: 387 LITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQV 446

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           +  T+V LL  C+ AGAL +GK +H  + +  +    ++ TALVDMY+KCG +  A R F
Sbjct: 447 DSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCF 506

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
               ++D+  W  ++AGYG HG G+ AL  + +   SG++PN + F+ +L++CSH G+V 
Sbjct: 507 DSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQ 566

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +G  +F  MV   G+ P  EH  C+VDLL RA  +++A +  K    RP++ V G +L A
Sbjct: 567 QGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDA 626

Query: 555 SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEP 614
            + +    + +I    ++E++P + G+ V + + +A   RW+DV+     M+ + +KK P
Sbjct: 627 CRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLP 686

Query: 615 GFSSVEVNGLVHKFI 629
           G+S +E+NG    F 
Sbjct: 687 GWSKIEMNGKTTTFF 701



 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 155/539 (28%), Positives = 282/539 (52%), Gaps = 11/539 (2%)

Query: 30  TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL 89
           ++++N    +NS +     +      L+ ++ M  N    D FT P++LKACA +     
Sbjct: 5   SSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSF 64

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G  IH   + NG   D Y+S++L+ +Y++ G L  AR +F+EM  RDVV W+ MI  Y R
Sbjct: 65  GLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSR 124

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
            G+  EA  ++ EMRF  I+P  V ++ M+S   ++  +   + +H   V    D    +
Sbjct: 125 AGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFD--CDI 179

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
           A+  +++++Y KC ++  AK LF+++ Q  +VSW  MISGY     ++E ++L   M  +
Sbjct: 180 AVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGD 239

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            + P + T  + +   G +  L++G+ LH  I++ GF+  + +  AL+ MY KC +  ++
Sbjct: 240 GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEAS 299

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             + + + +KDV+ W  +IS   +    +KA  +F  M  S    +   +  +++ C + 
Sbjct: 300 YRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQL 359

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           G+ ++G  +H Y+ + G  +D     +L+ MYAKCG ++ +  +F     RD+  WNA++
Sbjct: 360 GSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAII 419

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKP-NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +GY  +    +AL+ F +M+   V+  +  T + LL ACS AG +  GK +   ++    
Sbjct: 420 SGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF- 478

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
           + P       +VD+  + G L+ A     S+  + +++ WG L+A    H     G+IA
Sbjct: 479 IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGK---GDIA 533


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  362 bits (929), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 209/668 (31%), Positives = 332/668 (49%), Gaps = 78/668 (11%)

Query: 29   YTNIINPLTRYNSLVTSYIKNNKPSSA------LNIYAFMRKNGSEVDNFTIPTILKACA 82
            Y  +     ++NS V  +      SSA      L ++  +   G   D+      LK C 
Sbjct: 631  YVGLPRNYLKWNSFVEEF-----KSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCT 685

Query: 83   QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
            +V+   LG EIHG  IK G D D Y+  AL+  Y  C  L  A  +F EMPN + + W+ 
Sbjct: 686  RVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEKANQVFHEMPNPEALLWNE 745

Query: 143  MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
             I    +    ++ +E+ R+M+F  ++     ++ ++     +  ++  K IH  V R  
Sbjct: 746  AIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFG 805

Query: 203  KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
             D    V++   LI MYSK G L  A+++F+ +   +  SW  MIS Y     +N+   L
Sbjct: 806  LDS--DVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSL 863

Query: 263  FAEMIEENVFPSEIT--------------------------------------ILSLIIE 284
            F E+   ++ P  +T                                      +L  I E
Sbjct: 864  FYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISE 923

Query: 285  CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
             GF   L +GK  H Y+LRNGF+  + +  +L+DMY K   + SA+ +FD MK++++  W
Sbjct: 924  LGF---LNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAW 980

Query: 345  NAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG----------------------- 381
            N+++S Y+     + A  L   M+   ++P+ VT  G                       
Sbjct: 981  NSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASIT 1040

Query: 382  -LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
             LL  C     L+ GK +H    + G   DV + TAL+DMY+K   +  A+++F     +
Sbjct: 1041 CLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNK 1100

Query: 441  DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
             +  WN M+ G+ + G G+EA+  F +M++ GV P+ ITF  LL+AC ++GL+ EG   F
Sbjct: 1101 TLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYF 1160

Query: 501  DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
            D M+    +VP++EHY CMVDLLGRAG LDEA ++I +MPL+P+  +WGALL + ++HKN
Sbjct: 1161 DSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKN 1220

Query: 561  PSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
                E AA  + ++EP N    +LM N+Y++ NRW D+  +R +M    V+    +S ++
Sbjct: 1221 LXFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQ 1280

Query: 621  VNGLVHKF 628
            +N  VH F
Sbjct: 1281 INQRVHVF 1288



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 129/496 (26%), Positives = 228/496 (45%), Gaps = 66/496 (13%)

Query: 105  DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR-GGLPEEALEVMREM 163
            DA   N LI  Y   G   SA  +F     R+ + W++ +  +    G     LEV +E+
Sbjct: 607  DAAAKN-LISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKEL 665

Query: 164  RFMDI-RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC 222
                +   SEV  +++ +    V D+ LG  IH C+++   D  L V +  AL++ Y +C
Sbjct: 666  HGKGVVFDSEVYSVALKTC-TRVMDIWLGMEIHGCLIKRGFD--LDVYLRCALMNFYGRC 722

Query: 223  GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI 282
              L  A Q+F+ +     + W   I   ++  ++ +GV LF +M    +     TI+ ++
Sbjct: 723  WGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVL 782

Query: 283  IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
              CG +G L   K +H Y+ R G +  +++ N L+ MY K  ++  AR +FD M++++  
Sbjct: 783  QACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNTS 842

Query: 343  IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT------------------------ 378
             WN++IS+YA    ++ A+ LF  ++ S ++P+ VT                        
Sbjct: 843  SWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRM 902

Query: 379  -----------MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
                       M  +L   +E G L MGK  H Y+ + G + DV + T+L+DMY K   +
Sbjct: 903  QGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSL 962

Query: 428  NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG----- 482
              A  +F     R+I  WN++++GY   G  E+AL     ME+ G+KP+ +T+ G     
Sbjct: 963  XSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGY 1022

Query: 483  -------------------LLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL 523
                               LL AC+   L+ +GK +    +   G +  +     ++D+ 
Sbjct: 1023 AMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRN-GFIEDVFVATALIDMY 1081

Query: 524  GRAGLLDEAHEMIKSM 539
             ++  L  AH++ + +
Sbjct: 1082 SKSSSLKNAHKVFRRI 1097


>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
          Length = 2090

 Score =  362 bits (929), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 201/563 (35%), Positives = 325/563 (57%), Gaps = 8/563 (1%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           T+   + AC  +     G ++HG+ I++G      V N+L+ MY++   +  A  LFDEM
Sbjct: 138 TLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEM 196

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF-MDIRPSEVAMISMVSLFADVADVDLG 191
             RDV+SWS MI GY + G  + AL++  EM     I    + M+S++   A+  D+ +G
Sbjct: 197 CERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMG 256

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           +++H  V+  C+     + +  ++IDMYSKC +   A + FN +   + VSW  +ISG +
Sbjct: 257 RSVHGVVI--CRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLV 314

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECG-FVGGLQLGKWLHAYILRNGFEFSL 310
           R  + +E + LF  M +      E+T+++L+  C  FV   Q  K++H+ ++R G+E + 
Sbjct: 315 RTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQC-KFIHSIVIRWGYELNE 373

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
            + N+L+D Y KC  I  A  LFD +K+KD + W+A+I+ +      D+A  LF  M  +
Sbjct: 374 FVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQA 433

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
           + +PN VT++ LL   + +  L+  KW H    ++GL  +V + TA++DMYAKCG++  +
Sbjct: 434 QEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLS 493

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
            + F +   ++I  W AM+A  GM+G   +AL    +M+  G+KPN +T + +L+ACSH 
Sbjct: 494 RKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHG 553

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP--LRPNMIVW 548
           GLV EG S F+ MV   G+ P +EHY CMVD+L RAG L+ A  +I+ MP  +R    +W
Sbjct: 554 GLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLW 613

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
           GALL+A +   N  +G  AA ++LE+EPQ+     L S++YA +  W D A +R ++K  
Sbjct: 614 GALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLVKAR 673

Query: 609 RVKKEPGFSSVEVNGLVHKFIRG 631
            V+   G+S V V     +F+ G
Sbjct: 674 GVRVVAGYSLVHVEDKAWRFVAG 696



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 265/506 (52%), Gaps = 30/506 (5%)

Query: 55  ALNIYAFMRKNGSEVDNFT-IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALI 113
           A + Y  M+K G+++ + T + +ILKAC+ +                G D      N+++
Sbjct: 33  ACSRYHQMKKAGAQLTDPTLVHSILKACSSL---------------PGFDSLTSTGNSVL 77

Query: 114 QMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEV 173
             Y + G+L SA ++FD M +RD VSW+ MI G+   G  ++ L   R+ R +   P+  
Sbjct: 78  DFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVS 137

Query: 174 AMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFN 233
            ++  +     +  ++ G  +H  ++R+   +    ++  +L+ MY+   ++  A++LF+
Sbjct: 138 TLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDI--PSVQNSLLSMYAD-NDMERAEELFD 194

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPSEITILSLIIECGFVGGLQ 292
            + +  V+SW+VMI GY++  E    ++LF EM    ++    IT++S++  C   G + 
Sbjct: 195 EMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDIS 254

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
           +G+ +H  ++  G ++ L + N+++DMY KC +  SA   F+ M  ++ + WN++IS   
Sbjct: 255 MGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLV 314

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
           +     +A  LF  M  +  R +EVT+V LL  C         K++H+ + + G E++  
Sbjct: 315 RTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEF 374

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           +  +L+D Y+KC  +  A++LF     +D   W+AM+AG+   G  +EA+  F +M ++ 
Sbjct: 375 VINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQ 434

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGL 528
            KPNG+T + LL A S +  +        K  HG+    GL  ++     ++D+  + G 
Sbjct: 435 EKPNGVTILSLLEAFSVSADLKR-----SKWAHGIAIRRGLAAEVAVGTAILDMYAKCGE 489

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAA 554
           +  + +    +P + N++ WGA++AA
Sbjct: 490 IGLSRKAFDQIPEK-NIVSWGAMIAA 514


>gi|449464466|ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
            [Cucumis sativus]
          Length = 1830

 Score =  362 bits (929), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 200/598 (33%), Positives = 320/598 (53%), Gaps = 30/598 (5%)

Query: 29   YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
            +  + NP    +  ++  Y  N+     +  Y  MR +  E DN     ILKAC+++   
Sbjct: 1175 FDQMPNPDFYAWKVMIRWYFLNDLFVDVIPFYNRMRMSFRECDNIIFSIILKACSELREI 1234

Query: 88   HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
              G+++H   +K G   D++V   LI MY +CG +  +  +F+E+ +++VVSW++MI GY
Sbjct: 1235 VEGRKVHCQIVKVG-GPDSFVMTGLIDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAGY 1293

Query: 148  HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
             +    EE L +   MR   +  +   + S+++ F  +  +  GK +H   ++N  +  L
Sbjct: 1294 VQNNCAEEGLVLFNRMRDALVESNPFTLGSIINAFTKLRALHQGKWVHGYAIKNIAE--L 1351

Query: 208  GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
               +AT  +DMY KCG    A+ +++ L    +VSWTVMI GY +  + N+G+RLFA+ I
Sbjct: 1352 SSFLATTFLDMYVKCGQTRDARMIYDELPTIDLVSWTVMIVGYTQARQPNDGLRLFADEI 1411

Query: 268  EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
              ++ P+   +        F+                         NAL+DMY KC  I 
Sbjct: 1412 RSDLLPNSALLQVFFQRVRFL-------------------------NALIDMYAKCHTIS 1446

Query: 328  SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
             A  +F G+  KDV+ WN++IS YAQ      A  LF  M+   + P+ +T+V  LS   
Sbjct: 1447 DAYAIFHGVLEKDVITWNSMISGYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASA 1506

Query: 388  EAGALEMGKWLHTYIEKQGL-EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
              GA+++G  LH Y  K GL   ++ + TAL++ YAKCGD   A  +F     ++I  W+
Sbjct: 1507 TLGAIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYAKCGDARSARMVFDSMGVKNIITWS 1566

Query: 447  AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
            AM+ GYG+ G G  +L  F +M +  +KPN + F  +L+ACS++G+V EG   F  M+  
Sbjct: 1567 AMIGGYGVQGDGSGSLSIFSNMLKEDLKPNEVIFTTVLSACSYSGMVEEGGRYFKSMIQD 1626

Query: 507  LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
               VP ++HY CMVDLL R+G LDEA + IK MP++ ++ ++GA L    L+    +GE+
Sbjct: 1627 YNFVPSMKHYACMVDLLARSGKLDEALDFIKKMPVQRDVSLYGAFLHGCGLYSRFDLGEV 1686

Query: 567  AATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
               ++L++      Y VL+SN+YA   +W  V  VR +M +  + K PG+S VE N +
Sbjct: 1687 VVREMLQLHRNEACYYVLVSNLYASDGKWGQVNEVRDLMLQRGLNKVPGYSLVETNAV 1744



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 224/465 (48%), Gaps = 33/465 (7%)

Query: 92   EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            + HG  I +GL G+      L+ +Y   G + SAR +FD+MPN D  +W  MIR Y    
Sbjct: 1138 KFHGLLIVHGLIGNLLCDTKLVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIRWYFLND 1197

Query: 152  LPEEALEVMREMRFMDIRPSEVAMISMV-SLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
            L  + +     MR M  R  +  + S++    +++ ++  G+ +H  +V+    +     
Sbjct: 1198 LFVDVIPFYNRMR-MSFRECDNIIFSIILKACSELREIVEGRKVHCQIVKVGGPDSF--- 1253

Query: 211  IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
            + T LIDMY KCG +  +  +F  +   +VVSWT MI+GY++ N   EG+ LF  M +  
Sbjct: 1254 VMTGLIDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDAL 1313

Query: 271  VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
            V  +  T+ S+I     +  L  GKW+H Y ++N  E S  +A   +DMY KC + R AR
Sbjct: 1314 VESNPFTLGSIINAFTKLRALHQGKWVHGYAIKNIAELSSFLATTFLDMYVKCGQTRDAR 1373

Query: 331  TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
             ++D + + D++ W  +I  Y QA   +    LF     S + PN               
Sbjct: 1374 MIYDELPTIDLVSWTVMIVGYTQARQPNDGLRLFADEIRSDLLPNSAL------------ 1421

Query: 391  ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
                   L  + ++      V    AL+DMYAKC  ++ AY +F   + +D+  WN+M++
Sbjct: 1422 -------LQVFFQR------VRFLNALIDMYAKCHTISDAYAIFHGVLEKDVITWNSMIS 1468

Query: 451  GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
            GY  +G   +AL  F  M    + P+ IT +  L+A +  G +  G S+    V G GL 
Sbjct: 1469 GYAQNGSAYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKG-GLF 1527

Query: 511  PKIEHYG-CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
                + G  +++   + G    A  +  SM ++ N+I W A++  
Sbjct: 1528 SSNLYIGTALLNFYAKCGDARSARMVFDSMGVK-NIITWSAMIGG 1571



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 87/175 (49%), Gaps = 1/175 (0%)

Query: 7    FLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNG 66
            FLN         H I   +   +  +   +  +NS+++ Y +N     AL ++  MR   
Sbjct: 1431 FLNALIDMYAKCHTISDAYAIFHGVLEKDVITWNSMISGYAQNGSAYDALRLFNQMRSYS 1490

Query: 67   SEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL-DGDAYVSNALIQMYSECGSLVSA 125
               D  T+ + L A A +    +G  +H +++K GL   + Y+  AL+  Y++CG   SA
Sbjct: 1491 LAPDAITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLYIGTALLNFYAKCGDARSA 1550

Query: 126  RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
            R +FD M  +++++WS MI GY   G    +L +   M   D++P+EV   +++S
Sbjct: 1551 RMVFDSMGVKNIITWSAMIGGYGVQGDGSGSLSIFSNMLKEDLKPNEVIFTTVLS 1605


>gi|224137486|ref|XP_002327138.1| predicted protein [Populus trichocarpa]
 gi|222835453|gb|EEE73888.1| predicted protein [Populus trichocarpa]
          Length = 601

 Score =  362 bits (929), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 206/590 (34%), Positives = 327/590 (55%), Gaps = 16/590 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N+L+    +N     AL I+  + + G      T+  ++ +C +      G+ IHG
Sbjct: 6   IVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQGRSIHG 65

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F IK G+D D+ V NAL  MY++ G L +A  LF+E+ ++ VVSW+TMI  Y   G   E
Sbjct: 66  FGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGNGFFNE 125

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV----AI 211
           ++ V + M    +  + V ++S+  L A+++     + IH      C   K G+    ++
Sbjct: 126 SMLVFKRMVEQKVEVNPVTIMSL--LPANISP----ELIH------CYAIKTGLINNGSV 173

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
            T+L+ +Y+KCG+   A+ L+    Q ++VS T +IS Y     ++  V  F+ M + ++
Sbjct: 174 VTSLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLDM 233

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
               + ++S++        + +G  LH Y L+NG +    ++N L+ MY K  +I +A +
Sbjct: 234 KLDSVAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNLVSNGLISMYFKFNDIEAAIS 293

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           LF  M  K ++ WN+VIS   QA     A + F  MK+  + P+ +T+  LL+ C++ G 
Sbjct: 294 LFYEMPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTGCSQLGY 353

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L +G+ LH YI +  LEV+  + T+L+DMY KCG +  A R+F       +  WN M++G
Sbjct: 354 LRLGERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAERVFKSIREPCVATWNTMISG 413

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           Y  +G    AL  +  M   G++P+ ITF+G+L AC H GL+ EGK  F  M    G+VP
Sbjct: 414 YSWYGLEHNALNCYSKMREQGLEPDRITFLGVLAACIHGGLLHEGKKHFQIMTEEFGMVP 473

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
            ++H  CMV LLGRAGL +EA   IK+M   P+  VWGALL A  +H+   +GE  A ++
Sbjct: 474 NLQHCACMVGLLGRAGLFEEALLFIKNMESEPDSAVWGALLNACCIHQEIKLGECLAKKL 533

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
             ++ +N G  VLMSN+YA  NRWND A +R +MK+I      G S +EV
Sbjct: 534 YLLDYKNCGLYVLMSNLYAATNRWNDAAKMREIMKDIGGDGTSGVSQIEV 583



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 206/425 (48%), Gaps = 14/425 (3%)

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           M +RD+VSW+ +I G  R G   +ALE+  ++      P +  ++ +V        V  G
Sbjct: 1   MLDRDIVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQG 60

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           ++IH   ++   D  L   +  AL  MY+K G+L  A+ LF  L   SVVSW  MI  Y 
Sbjct: 61  RSIHGFGIKTGID--LDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYA 118

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
                NE + +F  M+E+ V  + +TI+SL+            + +H Y ++ G   + +
Sbjct: 119 GNGFFNESMLVFKRMVEQKVEVNPVTIMSLL------PANISPELIHCYAIKTGLINNGS 172

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           +  +LV +Y KC     A  L+     K+++   A+IS+YA+   +D   E F  M+   
Sbjct: 173 VVTSLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLD 232

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           ++ + V MV +L   T+   + +G  LH Y  K GL+   ++   L+ MY K  D+  A 
Sbjct: 233 MKLDSVAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNLVSNGLISMYFKFNDIEAAI 292

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
            LF E   + +  WN++++G    G   +A+ FF  M+  G+ P+ IT   LL  CS  G
Sbjct: 293 SLFYEMPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTGCSQLG 352

Query: 492 LVTEGKSVFDKMVHGLGLVPKIEHY--GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
            +  G+ + + ++       ++E +    ++D+  + G +  A  + KS+   P +  W 
Sbjct: 353 YLRLGERLHNYILRN---NLEVEDFVGTSLIDMYTKCGSILLAERVFKSIR-EPCVATWN 408

Query: 550 ALLAA 554
            +++ 
Sbjct: 409 TMISG 413



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 89/170 (52%), Gaps = 9/170 (5%)

Query: 20  IIKTHFKFS---------YTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVD 70
           +I  +FKF+         Y     PL  +NS+++  ++  + S A+  +  M+  G   D
Sbjct: 278 LISMYFKFNDIEAAISLFYEMPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPD 337

Query: 71  NFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFD 130
             T+ ++L  C+Q+    LG+ +H + ++N L+ + +V  +LI MY++CGS++ A  +F 
Sbjct: 338 TITVASLLTGCSQLGYLRLGERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAERVFK 397

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
            +    V +W+TMI GY   GL   AL    +MR   + P  +  + +++
Sbjct: 398 SIREPCVATWNTMISGYSWYGLEHNALNCYSKMREQGLEPDRITFLGVLA 447


>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 579

 Score =  362 bits (928), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 189/541 (34%), Positives = 316/541 (58%), Gaps = 8/541 (1%)

Query: 92  EIHGFAIKNGLD-GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           +IH   +  GL   DA     LI  Y    +++ AR +F++MP R + +W++MI  Y R 
Sbjct: 3   QIHALILTTGLFFNDANSIAQLIASYGRINNIIPARNVFEKMPQRSINAWNSMIIAYSRT 62

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG-- 208
             P+E L +   M    I+P        +   + + D+D+G+ I    V    D   G  
Sbjct: 63  NYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAV----DFGYGFD 118

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V + ++++++Y+K G +  AK +F+++ +  VVSWT MI+G+ +     + + ++  M +
Sbjct: 119 VFVVSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQK 178

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
           E      + ++ LI  C  +G  + G  +H +++R        +  +L+DMY K  ++  
Sbjct: 179 ERTEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLEL 238

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           A  +F+G+  K V+ W A+IS +AQ    +K     + M+ S  +P+ V+++  LS C +
Sbjct: 239 ASRVFEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQ 298

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
            G L++GK LH +I K+ L +D +  TAL+DMYAKCG +  A  LF +   RD+ +WNAM
Sbjct: 299 VGNLKVGKSLHGHIVKR-LYLDKVSGTALIDMYAKCGALTFARALFDQIEPRDLILWNAM 357

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           ++ YG+HG G EAL  F+ M+ + + P+  TF  LL+ACSH+GLV EG+  F  ++    
Sbjct: 358 ISSYGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSK 417

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
           + P  +HY CMVDLL RAG ++EA+++I+SM ++P + +W ALL+    HKN  +GE+ A
Sbjct: 418 IQPSEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVA 477

Query: 569 TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            +ILE  P + G  VL+SN +++A +W+D A  R++MK   ++K PG+S+VEVNG +  F
Sbjct: 478 KKILESNPDDLGIYVLVSNFFSMAKKWDDAAVFRKIMKNTGMRKVPGYSAVEVNGDLQAF 537

Query: 629 I 629
           +
Sbjct: 538 L 538



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 131/415 (31%), Positives = 230/415 (55%), Gaps = 5/415 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++ +Y + N P   LN+Y  M   G + D+ T    LKAC+ ++   +G+ I   A+
Sbjct: 52  WNSMIIAYSRTNYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAV 111

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G   D +V ++++ +Y++ G +  A+ +FD+M  RDVVSW+TMI G+ + G P +A++
Sbjct: 112 DFGYGFDVFVVSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAID 171

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R M+        V M+ ++     + D   G ++H  +VR  ++  +   + T+LIDM
Sbjct: 172 IYRTMQKERTEGDGVVMVGLIQACTSLGDSKFGLSVHGHMVR--REMNMDNVLQTSLIDM 229

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G L  A ++F  +   SV+SW  +ISG+ +    N+ +    EM      P  +++
Sbjct: 230 YAKNGKLELASRVFEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSL 289

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +S +  C  VG L++GK LH +I++  +        AL+DMY KC  +  AR LFD ++ 
Sbjct: 290 ISSLSACAQVGNLKVGKSLHGHIVKRLY-LDKVSGTALIDMYAKCGALTFARALFDQIEP 348

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-W 397
           +D+++WNA+IS+Y       +A  LF+ MK + + P+  T   LLS C+ +G +E G+ W
Sbjct: 349 RDLILWNAMISSYGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYW 408

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAG 451
            H  I+K  ++        +VD+ ++ G V  AY+L  S  I   + +W A+++G
Sbjct: 409 FHVLIDKSKIQPSEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSG 463


>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
 gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
          Length = 1033

 Score =  362 bits (928), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 195/594 (32%), Positives = 321/594 (54%), Gaps = 3/594 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMR-KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           + +L+  Y+     + AL +++ M   +G + D F +   LKACA  +  + G+ +HGF+
Sbjct: 118 WTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFS 177

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K+GL    +VS+AL+ MY + G       +F+ M  R+VVSW+ +I G    G   + L
Sbjct: 178 VKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGL 237

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
               EM    +          +   A+   +  GKAIHA  ++   +E     +   L  
Sbjct: 238 SYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNET--AYVVNTLGT 295

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYSKC    Y  +LF +++   VVSWT +I  Y++  +    +  F  M + +V P+E T
Sbjct: 296 MYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYT 355

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             S+I  C  +   + G+ +H + LR G   +L+++N+++ +Y KC  ++ A  +FDGM 
Sbjct: 356 FASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMT 415

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KD++ W+ +IS Y Q     +AF     M     +PNE  +  +LS+C     LE GK 
Sbjct: 416 RKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQ 475

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H Y    GL+ + ++ +AL+ MY++ G++  A ++F      DI  W AM+ GY  HG 
Sbjct: 476 VHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGY 535

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            +EA+  F ++   G+ P+ +TFIG+L AC+HAGLV  G   +  M +   + P  EHYG
Sbjct: 536 SQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYG 595

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           C++DLL RAG L EA  M+++MP   + +VW  LL A + H +      AA Q+L + P 
Sbjct: 596 CIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLHPN 655

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           + G ++ ++NIY+ + R  + A VR++MK   V KEPG+S +  N  ++ F+ G
Sbjct: 656 SAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWSWINSNDQLNTFVAG 709



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 212/455 (46%), Gaps = 15/455 (3%)

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
           N+ ++   + G +  AR +F++M +RD +SW+ +I GY       EAL +   M ++D  
Sbjct: 88  NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNM-WVDSG 146

Query: 170 PSEVAMISMVSLFADV--ADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
             +   +  V+L A     +V  G+ +H   V++       V +++AL+DMY K G    
Sbjct: 147 LQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINS--VFVSSALVDMYMKVGKTEQ 204

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
              +F  +   +VVSWT +I G +      +G+  F+EM    V     T    +     
Sbjct: 205 GCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAE 264

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
            G L  GK +HA  ++ GF  +  + N L  MY KCR+      LF  M + DV+ W  +
Sbjct: 265 SGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNL 324

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           I  Y Q    ++A + F  M+ S V PNE T   ++S C      + G+ +H +  + GL
Sbjct: 325 IMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGL 384

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
              + +  +++ +Y+KCG +  A  +F     +DI  W+ +++ Y      +EA  +   
Sbjct: 385 VDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSW 444

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH----YGCMVDLL 523
           M R G KPN      +L+ C    L+  G     K VH   L   ++H    +  ++ + 
Sbjct: 445 MSREGPKPNEFALASVLSVCGSMALLEPG-----KQVHAYALCIGLDHETMVHSALISMY 499

Query: 524 GRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            R+G L EA ++  S+    +++ W A++     H
Sbjct: 500 SRSGNLQEASKIFDSIK-NNDIVSWTAMINGYAEH 533


>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49740-like [Vitis vinifera]
          Length = 729

 Score =  361 bits (927), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 206/586 (35%), Positives = 321/586 (54%), Gaps = 20/586 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++T   +N     ALN++  M + G   D +T  ++L  C+  L+   G+E+H   I
Sbjct: 153 WNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCSLELLD-FGREVHTLVI 211

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN--RDVVSWSTMIRGYHRGGLPEEA 156
           K G    A V NAL+ MY   G +  A  +F+E  +   D ++++ MI G    G  EEA
Sbjct: 212 KTGFLVRASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEA 271

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIA 212
           L + +EM+   +RP+E+  +S++S     +   +   +HA  +      K+G      ++
Sbjct: 272 LIMFKEMQEACLRPTELTFVSVMS---SCSSARVSHQVHAQAI------KMGFEACTPVS 322

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            A + MYS CGNL     +F+RL +  ++SW ++I  Y + N     +  F +M    + 
Sbjct: 323 NAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIE 382

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P E TI SL+        L++ K   A + +NG    + ++NALV  + K  +I  A  +
Sbjct: 383 PDEFTIGSLLASSE---SLEIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQV 439

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ M S +++ WN +IS +       +  E F  + +S ++PN  T+  +LS+C    AL
Sbjct: 440 FNNMSSPNLISWNTIISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISAL 499

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
             GK +H YI + G+     L  AL+ MYAKCGD++ + R+F+    RDI  WNAM++ Y
Sbjct: 500 RHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAY 559

Query: 453 GMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
             HG G+EA+ FF  M+ SG VKP+  TF  +L+ACSHAGLV +G  +F+ MV+  G  P
Sbjct: 560 AQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEP 619

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
             +H  C+VDLLGRAG L+EA  +I S  L+    +W  L +A   H N  +G I A  +
Sbjct: 620 GADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAGFL 679

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
           LEIE  +    VL+SNIYA A +W + A  R +M++ RV K+PG S
Sbjct: 680 LEIEQNDPAVYVLLSNIYAAAGQWEEAANTRDLMQKTRVAKQPGCS 725



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 138/562 (24%), Positives = 270/562 (48%), Gaps = 45/562 (8%)

Query: 31  NIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRK-NGSEVDNFTIPTILKACAQVLMTHL 89
           N    L + N L+    +++  S+++ ++  +   N  + D+FT+ + L ACA +     
Sbjct: 12  NAAEQLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAAS 71

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G ++H ++I+ GL    +V N L+  Y++   LVS + +F+E+ N DV SW+T++    +
Sbjct: 72  GNQLHAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTK 131

Query: 150 GG---------------LP----------------EEALEVMREMRFMDIRPSEVAMISM 178
            G               +P                E AL + REM  + +R  +    S+
Sbjct: 132 LGQIGYACHLFNQTPRMIPVVWNAIITGCAENKHTEIALNLFREMHQLGVRHDKYTFASV 191

Query: 179 VSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ- 237
           +SL   +  +D G+ +H  V++      +  ++  AL+ MY   G +A A ++F      
Sbjct: 192 LSL-CSLELLDFGREVHTLVIKT--GFLVRASVINALLTMYFNSGKVADAYEVFEEAEST 248

Query: 238 -NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
            +  +++ VMI G        E + +F EM E  + P+E+T +S++  C      ++   
Sbjct: 249 VHDDITFNVMIGGLASVGRDEEALIMFKEMQEACLRPTELTFVSVMSSC---SSARVSHQ 305

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           +HA  ++ GFE    ++NA + MY  C  + +   +FD ++ KD++ WN +I  YAQ + 
Sbjct: 306 VHAQAIKMGFEACTPVSNAAMTMYSSCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNF 365

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
              A   F+ M+ + + P+E T+  LL+    + +LE+ K     + K GL   + +  A
Sbjct: 366 YRLAILAFLQMQRAGIEPDEFTIGSLLA---SSESLEIVKMFQALVSKNGLNSKIEVSNA 422

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           LV  ++K G +  AY++F+     ++  WN +++G+  +G   + L  F ++  S +KPN
Sbjct: 423 LVSAFSKHGQIEQAYQVFNNMSSPNLISWNTIISGFLFNGFTLQGLEQFYELLMSTLKPN 482

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
             T   +L+ C+    +  GK +   ++   G+         ++ +  + G LD +  + 
Sbjct: 483 AYTLSIVLSICASISALRHGKQIHGYILRS-GVFSVTSLGNALITMYAKCGDLDWSLRIF 541

Query: 537 KSMPLRPNMIVWGALLAASKLH 558
             M  R +++ W A+++A   H
Sbjct: 542 NVMNGR-DIVSWNAMISAYAQH 562



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 137/284 (48%), Gaps = 20/284 (7%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           + N+ +P L  +N++++ ++ N      L  +  +  +  + + +T+  +L  CA +   
Sbjct: 440 FNNMSSPNLISWNTIISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASISAL 499

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
             GK+IHG+ +++G+     + NALI MY++CG L  +  +F+ M  RD+VSW+ MI  Y
Sbjct: 500 RHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMISAY 559

Query: 148 HRGGLPEEALEVMREMRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
            + G  +EA+   + M+    ++P +    +++S  +    VD G  I   +V +   E 
Sbjct: 560 AQHGKGKEAVHFFKAMQDSGGVKPDQATFTAVLSACSHAGLVDDGTRIFNSMVNDYGFEP 619

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFN--RLNQNSVVSWTVMIS----GYIRCNEINEGV 260
            G    + ++D+  + G L  A++L N   L   S + WT+  +    G +R   I  G 
Sbjct: 620 -GADHLSCIVDLLGRAGYLEEAERLINSKHLKIVSSIWWTLFSACAAHGNLRLGRIVAG- 677

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
             F   IE+N  P+   +LS I           G+W  A   R+
Sbjct: 678 --FLLEIEQND-PAVYVLLSNIYAAA-------GQWEEAANTRD 711


>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
 gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
          Length = 683

 Score =  361 bits (927), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 193/584 (33%), Positives = 320/584 (54%), Gaps = 6/584 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKN---GSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           Y  ++   ++  + + A+ ++  MR+        D+F +   LKAC +      G  +H 
Sbjct: 98  YGVMLWCLVQAERHAEAVALHQDMRRRRPCPEAQDDFVLSLALKACIRSADYGYGTRLHC 157

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+K G   D +V N+L+ MY++ G L  AR +F+ +P R+VVSW++M+ G  + G   +
Sbjct: 158 DAVKVG-GADGFVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAAD 216

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            L +  +MR  ++ PSE  + ++++  + +  +  G+ +H  V++  +       I+ AL
Sbjct: 217 GLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIK--QGLMSNSFISAAL 274

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY KCG L  A+ +F+ L+   +V WT MI GY +     + +RLF +    N+ P+ 
Sbjct: 275 LDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNS 334

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +TI +++     +  L LG+ +H   ++ G      + NALVDMY KC+ +  A  +F  
Sbjct: 335 VTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGS 394

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           + +KDV+ WN+++S YA+ +  + A  LF  M +    P+ +++V  LS     G L +G
Sbjct: 395 ISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIG 454

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           K  H Y  K     ++ + TAL+++Y KCGD+  A R+F E   R+   W AM+ GYGM 
Sbjct: 455 KSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQ 514

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G    ++  F +M + GV PN + F  +L+ CSH G+VT  K  FD M     + P ++H
Sbjct: 515 GDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKH 574

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y CMVD+L RAG L+EA E I +MP++ +  VWGA L   +LH     GE A  +++ + 
Sbjct: 575 YACMVDVLARAGNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMMVLH 634

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           P+     VL+SN+Y     W     +RR M+E  + K PG+SS+
Sbjct: 635 PERPDLYVLISNLYTSNGMWEKSQAIRRWMQEKGLVKLPGYSSI 678



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/502 (30%), Positives = 244/502 (48%), Gaps = 29/502 (5%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           T+P++     +VL   L     G      L G       L+  Y+  G L SAR +FD  
Sbjct: 41  TLPSL-----RVLHARLLTHTQGL-----LLGSLRARTKLLSCYAALGDLASARMVFDGT 90

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFA-----DVAD 187
           P  D  S+  M+    +     EA+ + ++MR    RP   A    V   A       AD
Sbjct: 91  PRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRR--RPCPEAQDDFVLSLALKACIRSAD 148

Query: 188 VDLGKAIHACVVRNCKDEKLGVA---IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
              G  +H      C   K+G A   +  +L+DMY+K G+L  A+++F R+   +VVSWT
Sbjct: 149 YGYGTRLH------CDAVKVGGADGFVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWT 202

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
            M+SG ++     +G+ LF +M ++NV PSE TI ++I  C  + GL  G+W+H  +++ 
Sbjct: 203 SMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQ 262

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
           G   +  ++ AL+DMY KC E+  A+ +FD +   D+++W  +I  Y Q      A  LF
Sbjct: 263 GLMSNSFISAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLF 322

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC 424
           +  K + + PN VT+  +LS   +   L +G+ +H    K GL    ++  ALVDMYAKC
Sbjct: 323 LDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKC 382

Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
             V+ A R+F     +D+  WN+M++GY  +    +AL+ F  M   G  P+ I+ +  L
Sbjct: 383 QAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHAL 442

Query: 485 NACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
           +A    G +  GKS     V     +  I     +++L  + G L  A  +   M  R N
Sbjct: 443 SASVCLGDLLIGKSFHGYAVKH-AFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDR-N 500

Query: 545 MIVWGALLAASKLHKNPSMGEI 566
            + W A++    +  + S G I
Sbjct: 501 SVTWCAMIGGYGMQGD-SAGSI 521



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 190/376 (50%), Gaps = 9/376 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + +++  Y +N  P  AL ++   +      ++ TI T+L A AQ+    LG+ IHG
Sbjct: 299 LVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHG 358

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+K GL     V NAL+ MY++C ++  A  +F  + N+DVV+W++M+ GY    +  +
Sbjct: 359 IAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCND 418

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL + ++M      P  ++++  +S    + D+ +GK+ H   V++       + ++TAL
Sbjct: 419 ALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLSN--IYVSTAL 476

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +++Y+KCG+L  A+++F+ +N  + V+W  MI GY    +    + LF EM+++ V P++
Sbjct: 477 LNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPND 536

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN--ALVDMYGKCREIRSARTLF 333
           +   S++  C   G +   K     + ++ F  + +M +   +VD+  +   +  A    
Sbjct: 537 VAFTSILSTCSHTGMVTAAKRYFDSMAQH-FNITPSMKHYACMVDVLARAGNLEEALEFI 595

Query: 334 DGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS-LCTEAGA 391
           D M  + D  +W A +        +    E    M V  + P    +  L+S L T  G 
Sbjct: 596 DNMPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMMV--LHPERPDLYVLISNLYTSNGM 653

Query: 392 LEMGKWLHTYIEKQGL 407
            E  + +  +++++GL
Sbjct: 654 WEKSQAIRRWMQEKGL 669


>gi|255559826|ref|XP_002520932.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539898|gb|EEF41477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 757

 Score =  361 bits (927), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 210/649 (32%), Positives = 353/649 (54%), Gaps = 44/649 (6%)

Query: 17  HAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKN----------- 65
           HA +IKT F  S+T+I       NS++  YIK  +  +A++++  MR             
Sbjct: 87  HACLIKTAFD-SFTSI------GNSILNFYIKCGELDTAVSVFDSMRSRDSVSWNVLIHG 139

Query: 66  --------------------GSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
                               G E +  T+  +++AC  +     G ++HG+ I++GL   
Sbjct: 140 CLDYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGLQLHGYLIQSGLWAS 199

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
             V N+ + MY++   +  AR LFDEMP +DV+SWS MI GY +    +  L++ ++M  
Sbjct: 200 WSVQNSFLCMYADV-DMDCARILFDEMPEKDVISWSAMIGGYVQYLEDQIGLQIFQKMLS 258

Query: 166 MD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
              I P  V ++S++   A+  ++ +G+ +H   +  C+     + +  +LIDMYSKC +
Sbjct: 259 TSRITPDGVILVSVLKACANSVNITMGRLVHGLTI--CRGLDSDLFVKNSLIDMYSKCKD 316

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
              A ++F+ + + + VSW  ++SG I   + +E + L   M  E +   E+T+++ +  
Sbjct: 317 AGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSMRTEGIEADEVTLVNCLQI 376

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
           C +       K +H   +R G E +  + N+L+D Y KC  I  A  +F   + +DV++W
Sbjct: 377 CKYFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLIELAWEVFSRTRRRDVVLW 436

Query: 345 NAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK 404
           + +I+ +A     D+A  +F  M      PN VT++ LL  C+ +  L+   W H    +
Sbjct: 437 STMIAGFAHCGKPDEAIAVFQKMNEGIEVPNAVTIINLLQACSVSAELKRSMWAHGAAIR 496

Query: 405 QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIF 464
           +GL  +V + TA+VDMY+KCG++  + + F++   ++I  W+ M+A YGM+G   EAL  
Sbjct: 497 RGLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIPQKNIITWSTMIAAYGMNGLAHEALAL 556

Query: 465 FVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLG 524
              M+   +KPN +T++ +L ACSH GLV  G SVF  M+   G+ P+ EHY CMVD+L 
Sbjct: 557 LAQMKSHEIKPNALTYLSVLTACSHGGLVEMGLSVFKSMIQDHGVDPEFEHYSCMVDMLS 616

Query: 525 RAGLLDEAHEMIKSMP--LRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYN 582
           RAG LD+A E+I+ MP   R    VWGALL+A + +++ ++GE A  Q+LE+EP N    
Sbjct: 617 RAGKLDDAMELIRMMPETFRAGASVWGALLSACRTYRSSTLGEKAVYQVLELEPLNLAGY 676

Query: 583 VLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +L S++YA    W++ A ++ + +E  V+   G+S V V+   HKF+ G
Sbjct: 677 LLASSMYASDGLWDNAARMKLLARERGVRAVAGYSIVHVDSKAHKFVAG 725



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 247/516 (47%), Gaps = 9/516 (1%)

Query: 69  VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYL 128
           +D    P +LKAC+ +     GK +H   IK   D    + N+++  Y +CG L +A  +
Sbjct: 63  LDVTLFPPVLKACSYLSYID-GKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSV 121

Query: 129 FDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV 188
           FD M +RD VSW+ +I G    G   E L      R     P+   ++ +V     +   
Sbjct: 122 FDSMRSRDSVSWNVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAK 181

Query: 189 DLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
             G  +H  ++++        ++  + + MY+   ++  A+ LF+ + +  V+SW+ MI 
Sbjct: 182 QEGLQLHGYLIQS--GLWASWSVQNSFLCMYADV-DMDCARILFDEMPEKDVISWSAMIG 238

Query: 249 GYIRCNEINEGVRLFAEMIEEN-VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           GY++  E   G+++F +M+  + + P  + ++S++  C     + +G+ +H   +  G +
Sbjct: 239 GYVQYLEDQIGLQIFQKMLSTSRITPDGVILVSVLKACANSVNITMGRLVHGLTICRGLD 298

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             L + N+L+DMY KC++  SA  +F  M  ++ + WN+++S         +A  L   M
Sbjct: 299 SDLFVKNSLIDMYSKCKDAGSAFEVFSEMPRRNNVSWNSLLSGLILNKKYSEALLLVYSM 358

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           +   +  +EVT+V  L +C         K +H    ++G E + I+  +L+D YAKC  +
Sbjct: 359 RTEGIEADEVTLVNCLQICKYFAHPYHCKAVHCATIRRGCESNEIVLNSLIDAYAKCNLI 418

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             A+ +FS    RD+ +W+ M+AG+   G  +EA+  F  M      PN +T I LL AC
Sbjct: 419 ELAWEVFSRTRRRDVVLWSTMIAGFAHCGKPDEAIAVFQKMNEGIEVPNAVTIINLLQAC 478

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           S +  +          +   GL  ++     +VD+  + G ++ + +    +P + N+I 
Sbjct: 479 SVSAELKRSMWAHGAAIRR-GLAAEVAVGTAIVDMYSKCGEIEASRKAFNQIP-QKNIIT 536

Query: 548 WGALLAASKLHKNPSMGEIAATQIL--EIEPQNYGY 581
           W  ++AA  ++           Q+   EI+P    Y
Sbjct: 537 WSTMIAAYGMNGLAHEALALLAQMKSHEIKPNALTY 572



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 172/345 (49%), Gaps = 16/345 (4%)

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS--EITILSLII 283
           A A      L+ + ++SWT+ I       + +E +  + E+    +     ++T+   ++
Sbjct: 13  ASASMAMRFLSTSRLLSWTLRIKELSSNEKWHEVISQYYEITNAGISHHLLDVTLFPPVL 72

Query: 284 E-CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
           + C ++  +  GK LHA +++  F+   ++ N++++ Y KC E+ +A ++FD M+S+D +
Sbjct: 73  KACSYLSYID-GKCLHACLIKTAFDSFTSIGNSILNFYIKCGELDTAVSVFDSMRSRDSV 131

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
            WN +I        + +    FI+ +V+   PN  T+V L+  C    A + G  LH Y+
Sbjct: 132 SWNVLIHGCLDYGALVEGLWQFINARVAGFEPNISTLVLLVQACRSLRAKQEGLQLHGYL 191

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
            + GL     ++ + + MYA   D++ A  LF E   +D+  W+AM+ GY  +   +  L
Sbjct: 192 IQSGLWASWSVQNSFLCMYADV-DMDCARILFDEMPEKDVISWSAMIGGYVQYLEDQIGL 250

Query: 463 IFFVDM-ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLVPKIEHYG 517
             F  M   S + P+G+  + +L AC+++  +T G     ++VHGL    GL   +    
Sbjct: 251 QIFQKMLSTSRITPDGVILVSVLKACANSVNITMG-----RLVHGLTICRGLDSDLFVKN 305

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
            ++D+  +      A E+   MP R N + W +LL+   L+K  S
Sbjct: 306 SLIDMYSKCKDAGSAFEVFSEMPRRNN-VSWNSLLSGLILNKKYS 349


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  361 bits (927), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 199/516 (38%), Positives = 312/516 (60%), Gaps = 16/516 (3%)

Query: 128 LFDEMPNR-DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
           LF+   ++ DV SW+++I    R G   EAL     MR + + P+  +    +   + + 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 187 DVDLGKAIH--ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
           D+  GK  H  A V     D    + +++ALI MYS CG L  A+++F+ + + ++VSWT
Sbjct: 91  DIFSGKQTHQQAFVFGYQSD----IFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWT 146

Query: 245 VMISGYIRCNEINEGVRLFAEM-IEEN-----VFPSEITILSLIIECGFVGGLQLGKWLH 298
            MI GY       + V LF ++ ++EN     +F   + ++S+I  C  V    L + +H
Sbjct: 147 SMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIH 206

Query: 299 AYILRNGFEFSLAMANALVDMYGKCRE--IRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           +++++ GF+  +++ N L+D Y K  E  +  AR +FD +  KD + +N+++S YAQ+  
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266

Query: 357 IDKAFELFIHMKVSKVRP-NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
            ++AFE+F  +  +KV   N +T+  +L   + +GAL +GK +H  + + GLE DVI+ T
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           +++DMY KCG V  A + F     +++  W AM+AGYGMHG   +AL  F  M  SGV+P
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEM 535
           N ITF+ +L ACSHAGL  EG   F+ M    G+ P +EHYGCMVDLLGRAG L +A+++
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446

Query: 536 IKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRW 595
           I+ M ++P+ I+W +LLAA ++HKN  + EI+  ++ E++  N GY +L+S+IYA A RW
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRW 506

Query: 596 NDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            DV  VR +MK   + K PGFS +E+NG VH F+ G
Sbjct: 507 KDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIG 542



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 132/429 (30%), Positives = 232/429 (54%), Gaps = 15/429 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++    ++   + AL  ++ MRK        + P  +KAC+ +     GK+ H  A 
Sbjct: 44  WNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAF 103

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G   D +VS+ALI MYS CG L  AR +FDE+P R++VSW++MIRGY   G   +A+ 
Sbjct: 104 VFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVS 163

Query: 159 VMREMRFMDIRPSEVAM-------ISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
           + +++  +D    + AM       +S++S  + V    L ++IH+ V++   D   GV++
Sbjct: 164 LFKDL-LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR--GVSV 220

Query: 212 ATALIDMYSKCGN--LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
              L+D Y+K G   +A A+++F+++     VS+  ++S Y +    NE   +F  +++ 
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKN 280

Query: 270 NVFP-SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
            V   + IT+ ++++     G L++GK +H  ++R G E  + +  +++DMY KC  + +
Sbjct: 281 KVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVET 340

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           AR  FD MK+K+V  W A+I+ Y       KA ELF  M  S VRPN +T V +L+ C+ 
Sbjct: 341 ARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSH 400

Query: 389 AGA-LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWN 446
           AG  +E  +W +    + G+E  +     +VD+  + G +  AY L      + D  +W+
Sbjct: 401 AGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWS 460

Query: 447 AMMAGYGMH 455
           +++A   +H
Sbjct: 461 SLLAACRIH 469


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  361 bits (927), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 199/516 (38%), Positives = 311/516 (60%), Gaps = 16/516 (3%)

Query: 128 LFDEMPNR-DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
           LF+   ++ DV SW+++I    R G   EAL     MR + + P+  +    +   + + 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 187 DVDLGKAIH--ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
           D+  GK  H  A V     D    + +++ALI MYS CG L  A+++F+ + +  +VSWT
Sbjct: 91  DIFSGKQTHQQAFVFGYQSD----IFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWT 146

Query: 245 VMISGYIRCNEINEGVRLFAEM-IEEN-----VFPSEITILSLIIECGFVGGLQLGKWLH 298
            MI GY       + V LF ++ ++EN     +F   + ++S+I  C  V    L + +H
Sbjct: 147 SMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIH 206

Query: 299 AYILRNGFEFSLAMANALVDMYGKCRE--IRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           +++++ GF+  +++ N L+D Y K  E  +  AR +FD +  KD + +N+++S YAQ+  
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266

Query: 357 IDKAFELFIHMKVSKVRP-NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
            ++AFE+F  +  +KV   N +T+  +L   + +GAL +GK +H  + + GLE DVI+ T
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           +++DMY KCG V  A + F     +++  W AM+AGYGMHG   +AL  F  M  SGV+P
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEM 535
           N ITF+ +L ACSHAGL  EG   F+ M    G+ P +EHYGCMVDLLGRAG L +A+++
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446

Query: 536 IKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRW 595
           I+ M ++P+ I+W +LLAA ++HKN  + EI+  ++ E++  N GY +L+S+IYA A RW
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRW 506

Query: 596 NDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            DV  VR +MK   + K PGFS +E+NG VH F+ G
Sbjct: 507 KDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIG 542



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/429 (31%), Positives = 232/429 (54%), Gaps = 15/429 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++    ++   + AL  ++ MRK        + P  +KAC+ +     GK+ H  A 
Sbjct: 44  WNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAF 103

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G   D +VS+ALI MYS CG L  AR +FDE+P RD+VSW++MIRGY   G   +A+ 
Sbjct: 104 VFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRDIVSWTSMIRGYDLNGNALDAVS 163

Query: 159 VMREMRFMDIRPSEVAM-------ISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
           + +++  +D    + AM       +S++S  + V    L ++IH+ V++   D   GV++
Sbjct: 164 LFKDL-LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR--GVSV 220

Query: 212 ATALIDMYSKCGN--LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
              L+D Y+K G   +A A+++F+++     VS+  ++S Y +    NE   +F  +++ 
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKN 280

Query: 270 NVFP-SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
            V   + IT+ ++++     G L++GK +H  ++R G E  + +  +++DMY KC  + +
Sbjct: 281 KVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVET 340

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           AR  FD MK+K+V  W A+I+ Y       KA ELF  M  S VRPN +T V +L+ C+ 
Sbjct: 341 ARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSH 400

Query: 389 AGA-LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWN 446
           AG  +E  +W +    + G+E  +     +VD+  + G +  AY L      + D  +W+
Sbjct: 401 AGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWS 460

Query: 447 AMMAGYGMH 455
           +++A   +H
Sbjct: 461 SLLAACRIH 469


>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 673

 Score =  361 bits (927), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 197/571 (34%), Positives = 315/571 (55%), Gaps = 5/571 (0%)

Query: 51  KPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYV 108
           + + AL ++  MR+   E   D   +   LKA  +      G+ +H  A+K G   D +V
Sbjct: 101 RHADALALHRGMRRRCPEAHDDVVLLSLALKASVRSADFRYGRRLHCNAVKAG-GADGFV 159

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI 168
            N L+ MY++ G L +AR +FD +  R+VVSW++M+ G  + G  EE L +  EMR   +
Sbjct: 160 MNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMREERV 219

Query: 169 RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYA 228
            PSE  M S++     +  +  G+ +H  V+++         I  A++DMY KCG +  A
Sbjct: 220 LPSEYTMASVLMACTMLGSLHQGRWVHGSVIKH--GMVFNPFITAAVLDMYVKCGEVEDA 277

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
           ++LF+ L    +V WT MI GY +     + + LF++    ++ P+ +TI +++     +
Sbjct: 278 RRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQL 337

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
             L LG+ +HA  ++     +  + NALVDMY KC+ +  A  +F  + +KDV+ WN++I
Sbjct: 338 RNLSLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWNSLI 397

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
           + Y +    ++A  LF  M+V    P+ +++V  LS C   G L +GK  HTY  K+   
Sbjct: 398 AGYVENDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFL 457

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            +V + TAL+++Y KC D+  A R+FSE   R+   W AM+ GYGM G    ++     M
Sbjct: 458 SNVYVNTALLNLYNKCADLPSAQRVFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKM 517

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
            +  ++PN + F  +L+ CSH G+V+ GK  FD M     + P ++HY CMVD+L RAG 
Sbjct: 518 LKDNIQPNEVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGN 577

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNI 588
           L+EA E I+ MP+  ++ +WGA L   KLH     GE A  +++ + P    + VLMSN+
Sbjct: 578 LEEALEFIQKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMMVLHPDKPDFYVLMSNL 637

Query: 589 YAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           Y    RW+    +RR+M+E  + K PG SSV
Sbjct: 638 YTSYGRWDKSLAIRRLMQERGLVKLPGCSSV 668



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 150/482 (31%), Positives = 244/482 (50%), Gaps = 18/482 (3%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +L ACA +      + +H   + +GL         L+  Y+  G L SAR + DE P  D
Sbjct: 29  LLPACATLPSL---RALHARLLAHGLLRALRARTKLLSCYAALGDLASARRVLDETPRPD 85

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV--ADVDLGKAI 194
             ++   +  +   G   +AL + R MR       +  ++  ++L A V  AD   G+ +
Sbjct: 86  PYTYRVALGWHAAAGRHADALALHRGMRRRCPEAHDDVVLLSLALKASVRSADFRYGRRL 145

Query: 195 HACVVRNCKDEKLGVA---IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           H      C   K G A   +   L+DMY+K G+L  A+++F+R+   +VVSWT M+SG +
Sbjct: 146 H------CNAVKAGGADGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCL 199

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +     EG+ LF EM EE V PSE T+ S+++ C  +G L  G+W+H  ++++G  F+  
Sbjct: 200 QNGFAEEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPF 259

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           +  A++DMY KC E+  AR LFD +   D+++W  +I  Y Q      A  LF   K   
Sbjct: 260 ITAAVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVH 319

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTY-IEKQGLEVDVILKTALVDMYAKCGDVNGA 430
           + PN VT+  +LS   +   L +G+ +H   ++   +E DV++  ALVDMYAKC  ++ A
Sbjct: 320 IVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDVVM-NALVDMYAKCKALSEA 378

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
             +F     +D+  WN+++AGY  +  G EAL+ F  M   G  P+ I+ +  L+AC   
Sbjct: 379 NGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCL 438

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           G +  GK  F         +  +     +++L  +   L  A  +   M  R N + WGA
Sbjct: 439 GDLLIGK-CFHTYAVKRAFLSNVYVNTALLNLYNKCADLPSAQRVFSEMSER-NSVTWGA 496

Query: 551 LL 552
           ++
Sbjct: 497 MI 498



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 232/430 (53%), Gaps = 9/430 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + S+++  ++N      L ++  MR+       +T+ ++L AC  +   H G+ +HG  I
Sbjct: 191 WTSMLSGCLQNGFAEEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVI 250

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G+  + +++ A++ MY +CG +  AR LFDE+   D+V W+TMI GY + G P +AL 
Sbjct: 251 KHGMVFNPFITAAVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALL 310

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  + +F+ I P+ V + +++S  A + ++ LG+ IHA  V+    E     +  AL+DM
Sbjct: 311 LFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIEN--DVVMNALVDM 368

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KC  L+ A  +F R++   VV+W  +I+GY+  +  NE + LF++M  +   P  I+I
Sbjct: 369 YAKCKALSEANGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPDAISI 428

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           ++ +  C  +G L +GK  H Y ++  F  ++ +  AL+++Y KC ++ SA+ +F  M  
Sbjct: 429 VNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTALLNLYNKCADLPSAQRVFSEMSE 488

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           ++ + W A+I  Y        + +L   M    ++PNEV    +LS C+  G + +GK  
Sbjct: 489 RNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCSHTGMVSVGKMC 548

Query: 399 HTYIEKQGLEVDVILK--TALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
              +  Q   +   +K    +VD+ A+ G++  A     +  +  DI +W A + G  +H
Sbjct: 549 FDSM-AQYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMPADISIWGAFLHGCKLH 607

Query: 456 G---CGEEAL 462
                GEEA+
Sbjct: 608 SRLEFGEEAI 617


>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
 gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
          Length = 771

 Score =  361 bits (927), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 190/596 (31%), Positives = 326/596 (54%), Gaps = 4/596 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +NSLV++ + N     A      M ++G  V+  ++ +++ AC        G  +HG
Sbjct: 178 IVSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHG 237

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K+GLD    + NAL+ MY + G L S+  +F+ M  ++ VSW++ +  +   G  E+
Sbjct: 238 LVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHED 297

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            LE+ R M   ++ P  V + S++    D+    LGK +H   +R   +    + IA +L
Sbjct: 298 VLEMFRVMSEHEVTPGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESD--IFIANSL 355

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+K G L  A  +F  +   +VVSW  MI+   +     E   L  EM +    P+ 
Sbjct: 356 MDMYAKFGCLEKASAIFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNS 415

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T+++L+  C  V  +++GK +HA+ +       L ++NAL+D+Y KC ++  A+ +FD 
Sbjct: 416 FTLVNLLPACSRVASVKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDR 475

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
            +  DV  +N +I  Y+Q+ C  ++  LF  M+ + +  + V+ +G LS C    A + G
Sbjct: 476 SEKDDVS-YNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQG 534

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           K +H  + ++ L     L  +L+D+Y K G +  A ++F+    +D+  WN M+ GYGMH
Sbjct: 535 KEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTMILGYGMH 594

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  + A   F  M+  GV  + +++I +L+ACSH GLV  GK  F +M+    + P+  H
Sbjct: 595 GQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGGLVDRGKKYFSQMI-AQNIKPQQMH 653

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y CMVDLLGRAG L E+ E+I +MP   N  VWGALL + ++H +  +  +AA  + E++
Sbjct: 654 YACMVDLLGRAGQLSESVEIITNMPFPANSDVWGALLGSCRIHGDIELARLAAEHLFELK 713

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           P++ GY  L+ N+Y+ +  WN+   ++ +MK  +V+K P +S V+    +  F+ G
Sbjct: 714 PEHSGYYTLLRNMYSESGMWNEANEIKTLMKSRKVQKNPAYSWVQSGNKLQAFLVG 769



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 153/527 (29%), Positives = 271/527 (51%), Gaps = 13/527 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL-----GKEI 93
           +NSL  +      PS AL +Y  M ++G   D+ T P  L A A  ++        G E+
Sbjct: 74  WNSLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAEL 133

Query: 94  HGFAIKNGLD-GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           H  A++ GL   D +  N L+  Y+  G    AR +FDEMP RD+VSW++++      G+
Sbjct: 134 HAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGM 193

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            E+A   +  M    I  +  +++S+V       D   G ++H  V+++  D    V + 
Sbjct: 194 LEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSV--VNLG 251

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            AL+DMY K G+L  + ++FN + + + VSW   +  +       + + +F  M E  V 
Sbjct: 252 NALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVT 311

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P  +T+ SL+     +G   LGK +H Y +R   E  + +AN+L+DMY K   +  A  +
Sbjct: 312 PGSVTLSSLLPALVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAI 371

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ ++ ++V+ WNA+I+  AQ     +AF L I M+ +   PN  T+V LL  C+   ++
Sbjct: 372 FENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASV 431

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           +MGK +H +   + L  D+ +  AL+D+YAKCG ++ A  +F  +   D+  +N ++ GY
Sbjct: 432 KMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSEKDDVS-YNTLIVGY 490

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG-LGLVP 511
               C  E+L  F  M  +G++ + ++F+G L+AC++     +GK +   +V   L   P
Sbjct: 491 SQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACANLSAFKQGKEIHGVLVRRLLNTHP 550

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            + +   ++DL  + G+L  A ++   +  R ++  W  ++    +H
Sbjct: 551 FLAN--SLLDLYTKGGMLATASKIFNRIT-RKDVASWNTMILGYGMH 594



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 211/451 (46%), Gaps = 19/451 (4%)

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR--DVVSWSTMIRGYHRGGLPEE 155
           +   L     ++ AL+  Y+    + SAR +    P R      W+++ R     GLP E
Sbjct: 30  VSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRSAFLWNSLSRALASAGLPSE 89

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL-----GKAIHACVVRNCKDEKLGVA 210
           AL V   M    +RP +      +   A     +      G  +HA  +R       G+ 
Sbjct: 90  ALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKGAELHAAALRR------GLL 143

Query: 211 IA-----TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           +A       L+  Y+  G  A A+++F+ +    +VSW  ++S  +    + +  R    
Sbjct: 144 LADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVG 203

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M+   +  +  +++S++  CG       G  +H  +L++G +  + + NALVDMYGK  +
Sbjct: 204 MMRSGIPVNVASLVSVVPACGTERDEGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGD 263

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           + S+  +F+GM+ K+ + WN+ +  +A A   +   E+F  M   +V P  VT+  LL  
Sbjct: 264 LESSMRVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPA 323

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
             + G   +GK +H Y  ++ +E D+ +  +L+DMYAK G +  A  +F     R++  W
Sbjct: 324 LVDLGYFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSW 383

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           NAM+A    +G   EA    ++M+++G  PN  T + LL ACS    V  GK +    +H
Sbjct: 384 NAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVASVKMGKQIHAWSIH 443

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
              L+  +     ++D+  + G L  A ++ 
Sbjct: 444 -RSLMSDLFVSNALIDVYAKCGQLSVAQDIF 473



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 127/282 (45%), Gaps = 21/282 (7%)

Query: 284 ECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTLF--DGMKSKD 340
           +CG  G   L +  HA  L +G    SL +A AL+  Y   R+I SAR +     ++ + 
Sbjct: 13  QCG--GNSLLLRRAHAASLVSGALTASLPLAGALLLSYAALRDIPSARLILRHHPLRLRS 70

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM-----G 395
             +WN++  A A A    +A  ++  M  S VRP++ T    L     A   E      G
Sbjct: 71  AFLWNSLSRALASAGLPSEALRVYNCMVRSGVRPDDRTFPFALHAAAAAVVAEAEHPAKG 130

Query: 396 KWLHTYIEKQGLEV-DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
             LH    ++GL + DV     LV  YA  G    A R+F E   RDI  WN++++    
Sbjct: 131 AELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVSALLT 190

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLV 510
           +G  E+A    V M RSG+  N  + + ++ AC      TE    F   VHGL    GL 
Sbjct: 191 NGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACG-----TERDEGFGLSVHGLVLKSGLD 245

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
             +     +VD+ G+ G L+ +  +   M  + N + W + L
Sbjct: 246 SVVNLGNALVDMYGKFGDLESSMRVFNGMQEK-NEVSWNSAL 286


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  361 bits (926), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 199/593 (33%), Positives = 329/593 (55%), Gaps = 8/593 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + SL+T YI+       ++++  MR  G   + FT  ++L   A   M  LG+ +H  +I
Sbjct: 125 WTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHVHAQSI 184

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G     +V N+L+ MY++CG +  AR +F  M  RD+VSW+T++ G    G   EAL+
Sbjct: 185 KFGCCSTVFVCNSLMNMYAKCGLVEEARVVFCRMETRDMVSWNTLMAGLVLNGRDLEALQ 244

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  + R      +E    ++++L A++  + L + +H+ V+++       V   TAL+D 
Sbjct: 245 LFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVM--TALMDA 302

Query: 219 YSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           Y+K G L  A  +F  ++   +VVSWT MI G I+  +I     LF+ M E+ V P+++T
Sbjct: 303 YNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLT 362

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             +++     V        +HA +++  +E +  +  AL+  Y K      A ++F  + 
Sbjct: 363 YSTILT----VSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEEALSIFKMID 418

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC-TEAGALEMGK 396
            KDV+ W+A+++ YAQA   + A   FI M +  ++PNE T+   +  C + A  +++G+
Sbjct: 419 QKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGR 478

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
             H    K      + + +ALV MYA+ G +  A  +F     RD+  WN+M++GY  HG
Sbjct: 479 QFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNSMLSGYAQHG 538

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             ++AL  F  ME  G+  +G+TF+ ++  C+HAGLV EG+  FD MV   G+ P ++HY
Sbjct: 539 YSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDYGITPTMDHY 598

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            CMVDL  RAG LDE   +I+ MP      +W ALL A ++HKN  +G++AA ++L +EP
Sbjct: 599 ACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLAAEKLLSLEP 658

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            +    VL+SNIY+ A +W +   VR++M   +V+KE G S +++   VH FI
Sbjct: 659 LDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHFFI 711



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 242/504 (48%), Gaps = 21/504 (4%)

Query: 63  RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD-GDAYVSNALIQMYSECGS 121
           R+ G  V    +  I+K C  V    LGK++H   ++ G D GD  V  +L+ MY    S
Sbjct: 47  RRQGRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHS 106

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           ++  R +F+ M  R+VV+W++++ GY + G+  + + +   MR   + P+     S++S+
Sbjct: 107 VLDGRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSM 166

Query: 182 FADVADVDLGKAIHACVVR-NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
            A    VDLG+ +HA  ++  C      V +  +L++MY+KCG +  A+ +F R+    +
Sbjct: 167 VASQGMVDLGQHVHAQSIKFGCCST---VFVCNSLMNMYAKCGLVEEARVVFCRMETRDM 223

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           VSW  +++G +      E ++LF +        +E T  ++I  C  +  L L + LH+ 
Sbjct: 224 VSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSS 283

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISAYAQAHCIDK 359
           +L++GF     +  AL+D Y K  ++  A  +F  M  S++V+ W A+I    Q   I  
Sbjct: 284 VLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPL 343

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVD 419
           A  LF  M+   V PN++T   +L++ +EA        +H  + K   E    + TAL+ 
Sbjct: 344 AAALFSRMREDGVAPNDLTYSTILTV-SEA---SFPPQIHAQVIKTNYECTPTVGTALMV 399

Query: 420 MYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGIT 479
            Y+K      A  +F     +D+  W+AM+  Y   G    A   F+ M   G+KPN  T
Sbjct: 400 SYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFT 459

Query: 480 FIGLLNAC-SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC----MVDLLGRAGLLDEAHE 534
               ++AC S A  V  G+       H + +  +     C    +V +  R G ++ A  
Sbjct: 460 ISSAIDACASPAAGVDLGRQ-----FHAISIKHRCHDALCVSSALVSMYARKGSIENAQC 514

Query: 535 MIKSMPLRPNMIVWGALLAASKLH 558
           + +    R +++ W ++L+    H
Sbjct: 515 VFERQTDR-DLLSWNSMLSGYAQH 537



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 209/424 (49%), Gaps = 10/424 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N+L+   + N +   AL ++   R + + +   T  T++  CA +    L +++H 
Sbjct: 223 MVSWNTLMAGLVLNGRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHS 282

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMIRGYHRGGLPE 154
             +K+G      V  AL+  Y++ G L  A  +F  M  +++VVSW+ MI G  + G   
Sbjct: 283 SVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIP 342

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
            A  +   MR   + P+++   ++++    V++      IHA V++   + +    + TA
Sbjct: 343 LAAALFSRMREDGVAPNDLTYSTILT----VSEASFPPQIHAQVIKT--NYECTPTVGTA 396

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+  YSK  +   A  +F  ++Q  VVSW+ M++ Y +  + N     F +M    + P+
Sbjct: 397 LMVSYSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPN 456

Query: 275 EITILSLIIECGF-VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           E TI S I  C     G+ LG+  HA  +++    +L +++ALV MY +   I +A+ +F
Sbjct: 457 EFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVF 516

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           +    +D++ WN+++S YAQ     KA ++F  M+V  +  + +T + ++  C  AG +E
Sbjct: 517 ERQTDRDLLSWNSMLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVE 576

Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY-RDICMWNAMMAG 451
            G ++    +   G+   +     +VD+Y++ G ++    L     +     +W A++  
Sbjct: 577 EGQQYFDLMVRDYGITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGA 636

Query: 452 YGMH 455
             +H
Sbjct: 637 CRVH 640


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  361 bits (926), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 193/497 (38%), Positives = 287/497 (57%), Gaps = 3/497 (0%)

Query: 143 MIRGYHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRN 201
           MI G+ +    E+++ V  +M   +  R     +I+++   A++ ++ LG  I  C+   
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQI-LCLAIK 59

Query: 202 CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVR 261
           C      V++ T LI ++SKCG +  A+ LF  + +  ++S   MISG+    E  + VR
Sbjct: 60  CGFYS-HVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVR 118

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           LF E++      S  TI+ LI      G   L   +H + ++ G     +++ AL  +Y 
Sbjct: 119 LFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTVYC 178

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           +  E+  AR LFD    K +  WNA+IS   Q    D A  LF  M+ + V PN VT+  
Sbjct: 179 RLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTS 238

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           +LS C + GAL +G+W+H+ I+    E +V + TAL+DMYAKCG +  A  LF     ++
Sbjct: 239 ILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPEKN 298

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
              WNAM++GYG+HG G+EAL  F DM  S VKP G+TF+ +L ACSHAGLV EG  +F 
Sbjct: 299 EVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGIFH 358

Query: 502 KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
            MVH  G  P  EHY CMVD+LGRAG L +A E IK+MP+ P   VWGALL A  +HK+ 
Sbjct: 359 TMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHKDT 418

Query: 562 SMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
           ++  +A+ ++ E++P+N GY VLMSNIY+V  ++   A VR+V K+ R+ K PG + +E+
Sbjct: 419 NLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLIEI 478

Query: 622 NGLVHKFIRGGMVNWKS 638
             + H F  G   + +S
Sbjct: 479 GQVPHVFTSGDQSHPQS 495



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 215/421 (51%), Gaps = 13/421 (3%)

Query: 42  LVTSYIKNNKPSSALNIYAFM-RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
           +++ ++KN+    ++ ++  M   NG   D  T+  +L A A++    LG +I   AIK 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G      +   LI ++S+CG +  AR LF E+  +D++S + MI G+   G  E+++ + 
Sbjct: 61  GFYSHVSLLTGLISLFSKCGEVEIARLLFGEIRKKDLISCNAMISGFTCNGETEDSVRLF 120

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV----AIATALI 216
           +E+     R S   ++ ++ +++      L   IH   V      KLG+    +++TAL 
Sbjct: 121 KELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCV------KLGIVSHSSVSTALT 174

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
            +Y +   + +A+QLF+   + ++ SW  MISG  +    +  + LF  M + NV P+ +
Sbjct: 175 TVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPV 234

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T+ S++  C  +G L LG+W+H+ I  N FE ++ ++ AL+DMY KC  I  AR LFD M
Sbjct: 235 TVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLM 294

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             K+ + WNA+IS Y       +A +LF  M  S V+P  +T + +L  C+ AG ++ G 
Sbjct: 295 PEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGD 354

Query: 397 WL-HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGM 454
            + HT +   G E        +VD+  + G +  A        +     +W A++    +
Sbjct: 355 GIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMI 414

Query: 455 H 455
           H
Sbjct: 415 H 415



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 169/317 (53%), Gaps = 4/317 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L   N++++ +  N +   ++ ++  +  +G  V + TI  ++   +    ++L   IHG
Sbjct: 97  LISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHG 156

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F +K G+   + VS AL  +Y     ++ AR LFDE   + + SW+ MI G  + GL + 
Sbjct: 157 FCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDA 216

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+ + + M+  ++ P+ V + S++S  A +  + LG+ +H+ +  N  +    V ++TAL
Sbjct: 217 AISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESN--VYVSTAL 274

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           IDMY+KCG++  A++LF+ + + + V+W  MISGY       E ++LF +M+  +V P+ 
Sbjct: 275 IDMYAKCGSITVARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTG 334

Query: 276 ITILSLIIECGFVGGLQLGKWL-HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           +T LS++  C   G ++ G  + H  +   GFE        +VD+ G+  +++ A     
Sbjct: 335 LTFLSVLYACSHAGLVKEGDGIFHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIK 394

Query: 335 GMKSKD-VMIWNAVISA 350
            M  +    +W A++ A
Sbjct: 395 AMPVEPGPPVWGALLGA 411


>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
 gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
          Length = 635

 Score =  360 bits (925), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 186/457 (40%), Positives = 264/457 (57%), Gaps = 48/457 (10%)

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI 282
           G++ YA+QLF+ + + SV SW +M  GY R      GV L+ EM+E NV P   T   L 
Sbjct: 62  GDMCYARQLFDTIPEPSVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLF 121

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
                   LQLG+ LH ++++ G + ++   NAL++MY  C  I  AR +FD     DV+
Sbjct: 122 KGFTRSVALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVV 181

Query: 343 IWNAVISAYAQA------------------------------------------------ 354
            WNA+IS Y +                                                 
Sbjct: 182 TWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRL 241

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
           +C  +A  LF  M+ SK++P+E TMV +L+ C + GALE+G+W+ TYI+K  ++ D  + 
Sbjct: 242 NCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVG 301

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
            AL+DMY KCG+V  A  +F+    RD   W AM+ G  ++GCGEEAL  F  M ++ V 
Sbjct: 302 NALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVT 361

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
           P+ +T++G+L+AC+H G+V EGK  F  M    G+ P I HYGCMVDLLG+AG L EAHE
Sbjct: 362 PDEVTYVGVLSACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHE 421

Query: 535 MIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANR 594
           +IK+MP++PN IVWGALL A ++HK+  M E A  QILE+EP N    VL  NIYA  N+
Sbjct: 422 IIKNMPMKPNSIVWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNK 481

Query: 595 WNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           W+ +  +R+VM +  +KK PG S +E+NG+VH+F+ G
Sbjct: 482 WDKLRELRQVMMDRGIKKTPGCSLIEMNGIVHEFVAG 518



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 201/425 (47%), Gaps = 57/425 (13%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N +   Y +   P   +++Y  M +   + D +T P + K   + +   LG+E+H   +
Sbjct: 82  WNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELHCHVV 141

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GLD + +  NALI MYS CG +  AR +FD     DVV+W+ MI GY+R         
Sbjct: 142 KYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNR--------- 192

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
                    I+   ++  ++V+ F +   VD                             
Sbjct: 193 ---------IKKDVISWTAIVTGFVNTGQVDA---------------------------- 215

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
                    A++ F+++ +   VSWT MI GY+R N   E + LF EM    + P E T+
Sbjct: 216 ---------ARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTM 266

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +S++  C  +G L+LG+W+  YI +N  +    + NAL+DMY KC  +  A ++F+ +  
Sbjct: 267 VSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTLPQ 326

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KW 397
           +D   W A++   A   C ++A  +F  M  + V P+EVT VG+LS CT  G ++ G K+
Sbjct: 327 RDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKF 386

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
             +   + G+E ++     +VD+  K G +  A+ +     +  +  +W A++    +H 
Sbjct: 387 FASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWGALLGACRIHK 446

Query: 457 CGEEA 461
             E A
Sbjct: 447 DAEMA 451


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  360 bits (925), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 196/594 (32%), Positives = 334/594 (56%), Gaps = 11/594 (1%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           ++ + ++  +P  AL ++  M + G   D F + +++ AC ++     G+ +H   I  G
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
              D  +  AL+QMY++CGSL  A+ +F+ M  +D+ +WS++I  Y R G  E A+ + R
Sbjct: 61  FRTDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVVLYR 120

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALIDMY 219
            M    + P+ V     +   A VA +  G+AIH  ++ +   +D+ L      +L++MY
Sbjct: 121 RMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVL----QDSLLNMY 176

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE-ENVFPSEITI 278
            KC  +  A+++F  +   +V S+T MIS Y++  E  E + LF+ M + E + P+  T 
Sbjct: 177 LKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTF 236

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            +++     +G L+ G+ +H ++   GF+ ++ + NALV MYGKC     AR +FD M +
Sbjct: 237 ATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTA 296

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           ++V+ W ++I+AYAQ     +A  LF  M V    P+ V+    L+ C   GAL+ G+ +
Sbjct: 297 RNVISWTSMIAAYAQHGNPQEALNLFKRMDVE---PSGVSFSSALNACALLGALDEGREI 353

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + +  L     ++T+L+ MYA+CG ++ A R+F+    RD    NAM+A +  HG  
Sbjct: 354 HHRVVEANL-ASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRK 412

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           ++AL  +  ME+ G+  +GITF+ +L ACSH  LV + +     +V   G+VP +EHY C
Sbjct: 413 KQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLC 472

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVD+LGR+G L +A E++++MP + + + W  LL+  K H +   GE AA ++ E+ P  
Sbjct: 473 MVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELAPAE 532

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
               V +SN+YA A R++D   VR+ M+E  V +    S +E++  +H F  GG
Sbjct: 533 TLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGG 586



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 222/477 (46%), Gaps = 39/477 (8%)

Query: 10  LEQTRQCHAHIIKTHFKFSYTNI---------------------------INPLTRYNSL 42
           LE+ R+ H H+I T F+   T+I                           I  L  ++S+
Sbjct: 46  LEEGRRLHEHLIITGFR---TDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSI 102

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           + +Y +  +   A+ +Y  M   G E +  T    L  CA V     G+ IH   + + +
Sbjct: 103 IAAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKV 162

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
             D  + ++L+ MY +C  +V AR +F+ M  R+V S++ MI  Y + G   EALE+   
Sbjct: 163 PQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSR 222

Query: 163 MRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
           M  ++ I P+     +++     + +++ G+ +H  +     D    V +  AL+ MY K
Sbjct: 223 MSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFD--TNVVVQNALVTMYGK 280

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
           CG+   A+++F+ +   +V+SWT MI+ Y +     E + LF  M   +V PS ++  S 
Sbjct: 281 CGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSA 337

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +  C  +G L  G+ +H  ++      S  M  +L+ MY +C  +  AR +F+ MK++D 
Sbjct: 338 LNACALLGALDEGREIHHRVVEANLA-SPQMETSLLSMYARCGSLDDARRVFNRMKTRDA 396

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL-EMGKWLHT 400
              NA+I+A+ Q     +A  ++  M+   +  + +T V +L  C+    + +   +L +
Sbjct: 397 FSCNAMIAAFTQHGRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQS 456

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHG 456
            +   G+   V     +VD+  + G +  A  L     Y+ D   W  +++G   HG
Sbjct: 457 LVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHG 513


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  360 bits (925), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 204/646 (31%), Positives = 337/646 (52%), Gaps = 33/646 (5%)

Query: 17  HAHIIKTHFKFSY-----------------TNIINPLTR-----YNSLVTSYIKNNKPSS 54
           HAHI++ H   S                    +++ + R     +N L+ +Y +  +P +
Sbjct: 37  HAHIVRAHPSPSLFLRNTLLAAYCRLGGHARRLLDEMPRTNAVSFNLLIDAYSRAGQPEA 96

Query: 55  ALNIYAFMRKN-GSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALI 113
           +L  +A  R++ G   D FT    L AC++      GK +H  ++  G+ G  +VSN+L+
Sbjct: 97  SLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSNSLV 156

Query: 114 QMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEV 173
            MY+ CG +  AR +FD    RD VSW+ ++ GY R G  ++ L V   MR   I  +  
Sbjct: 157 SMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSF 216

Query: 174 AMISMVSLFADVAD--VDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQL 231
           A+ S++   A   D  +D+  A+H CVV+   D    V +A+A++ MY+K G L+ A  L
Sbjct: 217 ALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSD--VFLASAMVGMYAKKGALSEAVAL 274

Query: 232 FNRLNQNSVVSWTVMISGYIR------CNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
           F  +   +VV +  MI+G  R       + + E + L++E+    + P+E T  S+I  C
Sbjct: 275 FKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRAC 334

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
              G ++ GK +H  +L++ F+    + +AL+D+Y     +      F  +  +DV+ W 
Sbjct: 335 NLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVVTWT 394

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
           A+IS   Q    ++A  LF  +  + ++P+  T+  +++ C        G+ +  +  K 
Sbjct: 395 AMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKS 454

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
           G      +  + + MYA+ GDV+ A R F E    DI  W+A+++ +  HGC  +AL FF
Sbjct: 455 GFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFF 514

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
            +M  + V PN ITF+G+L ACSH GLV EG   ++ M     L P I+H  C+VDLLGR
Sbjct: 515 NEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDLLGR 574

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLM 585
           AG L +A   I+        ++W +LLA+ ++H++   G++ A +I+E++P +    V +
Sbjct: 575 AGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIMELQPSSSASYVNL 634

Query: 586 SNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            NIY  A   +  + +R VMKE  VKKEPG S +E+   VH F+ G
Sbjct: 635 YNIYLDAGELSLASKIRDVMKERGVKKEPGLSWIELRSGVHSFVAG 680



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 207/416 (49%), Gaps = 13/416 (3%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H   ++       ++ N L+  Y   G    AR L DEMP  + VS++ +I  Y R G 
Sbjct: 36  VHAHIVRAHPSPSLFLRNTLLAAYCRLGG--HARRLLDEMPRTNAVSFNLLIDAYSRAGQ 93

Query: 153 PEEALEVM-REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
           PE +LE   R  R   +R       + ++  +    +  GKA+HA  V   +    GV +
Sbjct: 94  PEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSV--LEGIAGGVFV 151

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
           + +L+ MY++CG++  A+Q+F+  ++   VSW  ++SGY+R    ++ +R+FA M    +
Sbjct: 152 SNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGI 211

Query: 272 FPSEITILSLIIECGFVGG--LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
             +   + S+I  C       + +   +H  +++ GF+  + +A+A+V MY K   +  A
Sbjct: 212 GLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEA 271

Query: 330 RTLFDGMKSKDVMIWNAVIS------AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
             LF  +   +V+++NA+I+      A      + +A  L+  ++   + P E T   ++
Sbjct: 272 VALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVI 331

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
             C  AG +E GK +H  + K   + D  + +AL+D+Y   G +   +R F+    +D+ 
Sbjct: 332 RACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFTSVPKQDVV 391

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
            W AM++G   +   E AL  F ++  +G+KP+  T   ++NAC+   +   G+ +
Sbjct: 392 TWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQI 447


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  360 bits (925), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 186/508 (36%), Positives = 295/508 (58%), Gaps = 23/508 (4%)

Query: 124 SARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFA 183
           SA  LFD++ +RDV+SW++MI GY   GL E  L + ++M ++ I      +IS++   A
Sbjct: 65  SASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCA 124

Query: 184 DVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSW 243
               + LGKA+H+  +++  + +  +  +  L+DMYSKCG+L  A ++F ++ + +VVSW
Sbjct: 125 KSGTLSLGKAVHSLAIKSSFERR--INFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSW 182

Query: 244 TVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
           T MI+GY R    +  + L  +M +E V    + I S++  C   G L  GK +H YI  
Sbjct: 183 TSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKA 242

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
           N    +L + NAL+DMY KC  +  A ++F  M  KD++ WN +                
Sbjct: 243 NNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTM---------------- 286

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
                V +++P+  TM  +L  C    ALE GK +H YI + G   D  +  ALVD+Y K
Sbjct: 287 -----VGELKPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVK 341

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
           CG +  A  LF     +D+  W  M+AGYGMHG G EA+  F +M  +G++P+ ++FI +
Sbjct: 342 CGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISI 401

Query: 484 LNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           L ACSH+GL+ +G   F  M +   + PK+EHY CMVDLL R G L +A++ I+++P+ P
Sbjct: 402 LYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAP 461

Query: 544 NMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRR 603
           +  +WGALL   +++ +  + E  A ++ E+EP+N GY VL++NIYA A +W +V  +R 
Sbjct: 462 DATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMRE 521

Query: 604 VMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            + +  ++K PG S +E+ G V+ F+ G
Sbjct: 522 KIGKKGLRKNPGCSWIEIKGRVNLFVSG 549



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 132/416 (31%), Positives = 217/416 (52%), Gaps = 27/416 (6%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++ Y+ N      L IY  M   G +VD  TI ++L  CA+     LGK +H  AI
Sbjct: 81  WNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAI 140

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+  +     SN L+ MYS+CG L  A  +F++M  R+VVSW++MI GY R G  + A+ 
Sbjct: 141 KSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAII 200

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++++M    ++   VA+ S++   A    +D GK +H  +  N     L V    AL+DM
Sbjct: 201 LLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFV--CNALMDM 258

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG++  A  +F+ +    ++SW  M+                       + P   T+
Sbjct: 259 YAKCGSMEGANSVFSTMVVKDIISWNTMVG---------------------ELKPDSRTM 297

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
             ++  C  +  L+ GK +H YILRNG+     +ANALVD+Y KC  +  AR LFD + S
Sbjct: 298 ACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPS 357

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD++ W  +I+ Y      ++A   F  M+ + + P+EV+ + +L  C+ +G LE G W 
Sbjct: 358 KDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQG-WR 416

Query: 399 HTYIEKQGLEVDVILK--TALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAG 451
             YI K    ++  L+    +VD+ ++ G+++ AY+      I  D  +W A++ G
Sbjct: 417 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 472



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 159/342 (46%), Gaps = 52/342 (15%)

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+  Y+ CG+L   +++F+ + + +V  W  M+S Y +  +  E + LF  M+E+     
Sbjct: 2   LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEK----- 56

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
                                         G E             GK  E  SA  LFD
Sbjct: 57  ------------------------------GIE-------------GKRSE--SASELFD 71

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            +  +DV+ WN++IS Y      ++   ++  M    +  +  T++ +L  C ++G L +
Sbjct: 72  KLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSL 131

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           GK +H+   K   E  +     L+DMY+KCGD++GA R+F +   R++  W +M+AGY  
Sbjct: 132 GKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTR 191

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
            G  + A+I    ME+ GVK + +    +L+AC+ +G +  GK V D  +    +   + 
Sbjct: 192 DGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHD-YIKANNMASNLF 250

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
               ++D+  + G ++ A+ +  +M ++ ++I W  ++   K
Sbjct: 251 VCNALMDMYAKCGSMEGANSVFSTMVVK-DIISWNTMVGELK 291


>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570 [Vitis vinifera]
          Length = 561

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 205/553 (37%), Positives = 313/553 (56%), Gaps = 28/553 (5%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY---LF 129
           +I T+LKAC     T   +++H   I+ GL  D ++   + Q  + C SL +  Y   +F
Sbjct: 27  SISTLLKACTT---TSTLEQVHARIIRKGLHQDHFI---ISQFLTLCNSLSNFSYTTSVF 80

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           + + +   V W+T I+GY         + +   M+  D  P +    S++   + V  V 
Sbjct: 81  NGVSSPSTVLWNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVK 140

Query: 190 LGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
            G A H   VR       GV     + T+LID+Y KCG +  A+++F+ + + +VVSWT 
Sbjct: 141 EGVAFHGSAVR------CGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTA 194

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
           MI+GY   +++ E  +LF EM E+N   S   I+S  ++CG +   +  K       RN 
Sbjct: 195 MIAGYASFSDLVEARKLFDEMPEKNAV-SWNAIISGYVKCGDLRSAR--KMFDEMPHRNV 251

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
             F+      ++D Y K  ++ SAR +F+    +DV+ W+A+IS Y Q    ++A ++F+
Sbjct: 252 VSFT-----TMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFL 306

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD-VILKTALVDMYAKC 424
            M    V+P+E  MV L+S C++ G+LE+ KW+  Y+ K  ++V    +  AL+DM AKC
Sbjct: 307 EMCSRNVKPDEFIMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKC 366

Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
           G ++ A +LF E   RD+  + +MM G  +HGCG +A+  F  M   G+ P+ + F  +L
Sbjct: 367 GSMDRATKLFEEMPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVIL 426

Query: 485 NACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
            ACS AGLV EG   F+ M     +VP  +HY CMVDLLGRAG L EA+E++KSMP+ P+
Sbjct: 427 TACSRAGLVDEGCYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPH 486

Query: 545 MIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRV 604
              WGALL A KLH +  +GE+ A Q+ E+EPQN G  VL+SNIYA A +W DV+ +R  
Sbjct: 487 AGAWGALLGACKLHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNK 546

Query: 605 MKEIRVKKEPGFS 617
           M+E  ++K PG S
Sbjct: 547 MRERGIRKIPGCS 559



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/473 (28%), Positives = 236/473 (49%), Gaps = 47/473 (9%)

Query: 15  QCHAHIIKT-----HF-------------KFSYTNII-----NPLT-RYNSLVTSYIKNN 50
           Q HA II+      HF              FSYT  +     +P T  +N+ +  Y +N 
Sbjct: 43  QVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENY 102

Query: 51  KPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSN 110
             S  ++++  M+++ +  D FT P+++KAC++V     G   HG A++ G+ GD +V  
Sbjct: 103 SVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGGDVFVMT 162

Query: 111 ALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRP 170
           +LI +Y +CG ++ AR +FDEM  R+VVSW+ MI GY       EA ++  EM       
Sbjct: 163 SLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARKLFDEMP----EK 218

Query: 171 SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE--KLGVAIATALIDMYSKCGNLAYA 228
           + V+  +++S +    D+   + +         DE     V   T +ID Y+K G++A A
Sbjct: 219 NAVSWNAIISGYVKCGDLRSARKMF--------DEMPHRNVVSFTTMIDGYAKSGDMASA 270

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
           + +F    +  VV+W+ +ISGY++  + NE V++F EM   NV P E  ++SL+  C  +
Sbjct: 271 RFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEFIMVSLMSACSQM 330

Query: 289 GGLQLGKWLHAYILRNGFEFSLA-MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
           G L+L KW+  Y+ ++  +   A +  AL+DM  KC  +  A  LF+ M  +D++ + ++
Sbjct: 331 GSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKRDLISYCSM 390

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           +   +   C  +A  LF  M    + P++V    +L+ C+ AG ++ G +   Y E    
Sbjct: 391 MQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCY---YFESMKT 447

Query: 408 EVDVILK----TALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMH 455
           +  ++        +VD+  + G +  AY L  S  +      W A++    +H
Sbjct: 448 DYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLH 500


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 192/594 (32%), Positives = 325/594 (54%), Gaps = 3/594 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +  ++  Y +      AL ++  M++        T   IL ACA       G EIHG  +
Sbjct: 74  WTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQIL 133

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G +GD +V  ALI MY++CGS+  A   F  + +RDVVSW+ MI    +      A  
Sbjct: 134 QQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARW 193

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R M+   + P+++ + ++ + + D   +  GK I++ V     +    V +  + ++M
Sbjct: 194 LYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESD--VRVMNSAMNM 251

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           +   G L  A++LF  +    VV+W ++I+ Y++     E VRLF  + ++ +  ++IT 
Sbjct: 252 FGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITF 311

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           + ++     +  L  GK +H  +   G++  + +A AL+ +YG+C     A  +F  M S
Sbjct: 312 VLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGS 371

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KDV+ W  +  AYAQ     +A +LF  M++   RP   T+V +L  C    AL+ G+ +
Sbjct: 372 KDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQI 431

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H++I + G  ++++++TAL++MY KCG +  A  +F +   RDI +WN+M+  Y  HG  
Sbjct: 432 HSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYY 491

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +E L  F  M+  G K + ++F+ +L+A SH+G VT+G   F  M+    + P  E YGC
Sbjct: 492 DETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGC 551

Query: 519 MVDLLGRAGLLDEAHEMIKSMP-LRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           +VDLLGRAG + EA +++  +    P+ I+W  LL A + H      + AA Q+LE +P 
Sbjct: 552 VVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPS 611

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           + G  V++SN+YA A  W+ V  +R++M+   VKKEPG SS+E+   VH+F+ G
Sbjct: 612 HSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEG 665



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 258/489 (52%), Gaps = 4/489 (0%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF 129
           D      +L+ C+       G+ +H      G + +  V   LIQMY++CGS+  A+ +F
Sbjct: 4   DTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 63

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           + +  +DV +W+ MI  Y + G  + AL +  +M+  D+ P++V  +++++  A    + 
Sbjct: 64  EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 123

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
            G  IH  +++   +    V + TALI+MY+KCG++  A   F RL    VVSWT MI+ 
Sbjct: 124 DGMEIHGQILQQGFEGD--VFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 181

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
            ++ ++      L+  M  + V P++IT+ ++    G    L  GK++++ +     E  
Sbjct: 182 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVMESD 241

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           + + N+ ++M+G    +  AR LF+ M  +DV+ WN VI+ Y Q     +A  LF  ++ 
Sbjct: 242 VRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQ 301

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
             ++ N++T V +L++ T   +L  GK +H  +++ G + DV++ TAL+ +Y +C     
Sbjct: 302 DGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQ 361

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A+++F +   +D+  W  M   Y  +G  +EAL  F +M+  G +P   T + +L+ C+H
Sbjct: 362 AWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAH 421

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
              + +G+ +   ++   G   ++     ++++ G+ G + EA  + + M  R +++VW 
Sbjct: 422 LAALQKGRQIHSHIIEN-GFRMEMVVETALINMYGKCGKMAEARSVFEKMAKR-DILVWN 479

Query: 550 ALLAASKLH 558
           ++L A   H
Sbjct: 480 SMLGAYAQH 488



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 201/388 (51%), Gaps = 6/388 (1%)

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVV-RNCKDEKLGVAIATALIDMYSKCGNLA 226
            +P     ++++   +   +VD G+ +H  V  R  +   L   +   LI MY++CG++ 
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNL---VCGHLIQMYAQCGSVP 57

Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
            A+Q+F  L +  V +WT MI  Y +  + +  + +F +M EE+V P+++T ++++  C 
Sbjct: 58  EAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACA 117

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
               L+ G  +H  IL+ GFE  + +  AL++MY KC  +R A   F  ++ +DV+ W A
Sbjct: 118 STESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTA 177

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           +I+A  Q      A  L+  M++  V PN++T+  + +   +   L  GK++++ +  + 
Sbjct: 178 MIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRV 237

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
           +E DV +  + ++M+   G +  A RLF + + RD+  WN ++  Y  +    EA+  F 
Sbjct: 238 MESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFG 297

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRA 526
            +++ G+K N ITF+ +LN  +    + +GK V  ++V   G    +     ++ L GR 
Sbjct: 298 RLQQDGIKANDITFVLMLNVYTSLTSLAKGK-VIHELVKEAGYDRDVVVATALMSLYGRC 356

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAA 554
               +A ++   M  + ++I W  +  A
Sbjct: 357 EAPGQAWKIFVDMGSK-DVITWTVMCVA 383


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 194/601 (32%), Positives = 325/601 (54%), Gaps = 10/601 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+ +Y +      +L   A  R+ G +VD F+    L AC++      G+ +H  AI
Sbjct: 77  FNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAI 136

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +GL    +VSN+L+ MYS+CG +  AR +FD    RD VSW++++ GY R G  EE + 
Sbjct: 137 LDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVR 196

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVAD--VDLGKAIHACVVRNCKDEKLGVAIATALI 216
           V   MR   +  +  A+ S++   +   D  +D+ +A+H CV++   D    V + +A+I
Sbjct: 197 VFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSD--VFLVSAMI 254

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI------NEGVRLFAEMIEEN 270
           DMY+K G L  A  LF  + + +VV +  MI+G+ R   +      +E + L++E+    
Sbjct: 255 DMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRG 314

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + P+E T  S++  C   G L+ GK +H  +++  F+    + +AL+D+Y     +    
Sbjct: 315 MQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGF 374

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
             F      D++ W A++S   Q    +KA  LF     + ++P+  T+  +++ C    
Sbjct: 375 RCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLA 434

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
               G+ +  +  K G +   ++  + V MYA+ GDV+ A R F E    D+  W+A+++
Sbjct: 435 VARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVIS 494

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
            +  HGC  +AL FF +M  + V PN ITF+G+L ACSH GLV EG   ++ M    GL 
Sbjct: 495 CHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMTKDYGLS 554

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           P I+H  C+VDLLGRAG L +A   I +     + ++W +LLA+ ++H++   G++ A +
Sbjct: 555 PTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERGQLVANR 614

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIR 630
           I+E+EP +    V++ N+Y  A   +  +  R +MK+  VKKEPG S +E+   VH F+ 
Sbjct: 615 IMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVA 674

Query: 631 G 631
           G
Sbjct: 675 G 675



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 227/468 (48%), Gaps = 28/468 (5%)

Query: 107 YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM 166
           ++ N L+  Y   G  + AR L DEMP R+ VS++ +I  Y R GL   +LE +   R  
Sbjct: 44  FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103

Query: 167 DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLA 226
            +     +  + ++  +    +  G+A+HA  + +      GV ++ +L+ MYSKCG + 
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSS--GVFVSNSLVSMYSKCGEMG 161

Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
            A+++F+   +   VSW  ++SGY+R     E VR+FA M    +  +   + S+I  C 
Sbjct: 162 EARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCS 221

Query: 287 FVGG--LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
             G   + + + +H  +++ G +  + + +A++DMY K   +  A  LF  ++  +V+++
Sbjct: 222 GRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMF 281

Query: 345 NAVISAYAQAHCI------DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           N +I+ + +   +       +A  L+  ++   ++P E T   +L  C  AG LE GK +
Sbjct: 282 NTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQI 341

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + K   + D  + +AL+D+Y   G +   +R F  +   DI  W AM++G   +   
Sbjct: 342 HGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELH 401

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG--------KSVFDKMVHGLGLV 510
           E+AL  F +   +G+KP+  T   ++NAC+   +   G        KS FD+        
Sbjct: 402 EKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFT------ 455

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             +    C V +  R+G +D A    + M    +++ W A+++    H
Sbjct: 456 --VMGNSC-VHMYARSGDVDAATRRFQEME-SHDVVSWSAVISCHAQH 499



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 118/249 (47%), Gaps = 8/249 (3%)

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
           SL + N L+  Y +      AR L D M  ++ + +N +I AY++      + E     +
Sbjct: 42  SLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARAR 101

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
            + V  +  +    L+ C+ AG L  G+ +H      GL   V +  +LV MY+KCG++ 
Sbjct: 102 RAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMG 161

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A R+F  A  RD   WN++++GY   G  EE +  F  M R G+  N      ++  CS
Sbjct: 162 EARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCS 221

Query: 489 HAGLVTEGKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
             G   +G     + VHG     GL   +     M+D+  + G L EA  + +S+   PN
Sbjct: 222 GRG---DGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQ-EPN 277

Query: 545 MIVWGALLA 553
           ++++  ++A
Sbjct: 278 VVMFNTMIA 286



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 6/227 (2%)

Query: 25  FKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV 84
           F+   ++  + +  + ++V+  ++N     AL+++      G + D FTI +++ ACA +
Sbjct: 374 FRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASL 433

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
            +   G++I  FA K+G D    + N+ + MY+  G + +A   F EM + DVVSWS +I
Sbjct: 434 AVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVI 493

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
             + + G   +AL    EM    + P+E+  + +++  +    VD G   +  +    KD
Sbjct: 494 SCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMT---KD 550

Query: 205 EKLGVAI--ATALIDMYSKCGNLAYAKQLF-NRLNQNSVVSWTVMIS 248
             L   I   T ++D+  + G LA A+    N +     V W  +++
Sbjct: 551 YGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLA 597


>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Brachypodium distachyon]
          Length = 657

 Score =  360 bits (924), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 197/593 (33%), Positives = 317/593 (53%), Gaps = 50/593 (8%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSEC------GSLVSARYLFD 130
           +L+ C  +   HL  +IH   + +G    + V++ LI  Y         G L  AR LFD
Sbjct: 16  LLRQCRSI--QHL-DQIHAHLVVHGFSDVSSVASQLIASYCTLSAGDRDGGLCHARRLFD 72

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
            +P  D   ++T++R Y     P+EAL + R +    I P+E  +  ++     V  V+ 
Sbjct: 73  RIPEPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTVRAVEH 132

Query: 191 GKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
             A H  VV      KLG    + +A AL+  ++  G+L  +++ F  +   +VVSW  M
Sbjct: 133 ALAAHGVVV------KLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTM 186

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           I GY +  E++E   LF EM  + +     T++SL+  C   G L++G+ +H ++L +G 
Sbjct: 187 IGGYAQAGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGS 246

Query: 307 EFSLAMANALVDMYGKCRE-------------------------------IRSARTLFDG 335
                + NAL+DMYGKC +                               + + R  F+ 
Sbjct: 247 RVDRILGNALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQ 306

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M  ++++ WNA+IS Y Q   + +  +L+  M+   + P+E T+ G+LS C + G L  G
Sbjct: 307 MPERNIVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASG 366

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           K +H Y+     +  V L  +L+DMYA+CG V+ A  LF+E   +++  WN ++    MH
Sbjct: 367 KMIHCYVRDNFNDPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMH 426

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  +E + FF  M      P+ ITF+GLL+ACSH GL+  G+  F+ M     + P++EH
Sbjct: 427 GRAQETVTFFRTMVSDAFSPDEITFVGLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEH 486

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           YGCMVDLLGR G L +A  +IK M ++P+++VWGALL A ++H N  +G++   Q+LE+E
Sbjct: 487 YGCMVDLLGRRGHLAKAVNLIKDMSIKPDVVVWGALLGACRIHGNVEIGKLVIKQLLELE 546

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
               G  VL+ N++   N+W D+  +R++MKE   KK+ G SS+EV  ++H+F
Sbjct: 547 GITGGLFVLICNLFYETNQWEDMKKLRKLMKEQGTKKDMGVSSIEVKNIIHEF 599



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 225/451 (49%), Gaps = 35/451 (7%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+LV +Y  ++ P  AL ++  + + G   + FT+P +LKAC  V         HG  +
Sbjct: 82  YNTLVRAYSNSDCPQEALRLHRGVLQRGILPNEFTLPFVLKACTTVRAVEHALAAHGVVV 141

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G     +V+NAL+  ++  GSL  +R  F EM +R+VVSW+TMI GY + G   EA  
Sbjct: 142 KLGFVQQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIGGYAQAGEVSEACA 201

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  EMR   +      ++S++   +   ++++G+ +H  ++      ++   +  AL+DM
Sbjct: 202 LFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHML--VSGSRVDRILGNALLDM 259

Query: 219 YSKCGNLAYAKQLFN-------------------------------RLNQNSVVSWTVMI 247
           Y KCG+L  A + F+                               ++ + ++VSW  MI
Sbjct: 260 YGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNAMI 319

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           S Y++C  ++E + L+  M    + P E T+  ++  CG  G L  GK +H Y+  N  +
Sbjct: 320 SCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDNFND 379

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             + + N+L+DMY +C ++ +A  LF  M +K+V+ WN +I A A      +    F  M
Sbjct: 380 PGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGRAQETVTFFRTM 439

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK-QGLEVDVILKTALVDMYAKCGD 426
                 P+E+T VGLLS C+  G LE G++    + +   +E +V     +VD+  + G 
Sbjct: 440 VSDAFSPDEITFVGLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEHYGCMVDLLGRRGH 499

Query: 427 VNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
           +  A  L  + +I  D+ +W A++    +HG
Sbjct: 500 LAKAVNLIKDMSIKPDVVVWGALLGACRIHG 530



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 118/259 (45%), Gaps = 21/259 (8%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N++++ Y++  +    L++Y  MR  G   D FT+  +L AC Q      GK IH 
Sbjct: 312 IVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHC 371

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +   N  D    + N+L+ MY+ CG + +A  LF EMPN++V+SW+ +I      G  +E
Sbjct: 372 YVRDNFNDPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNKNVISWNVIIGALAMHGRAQE 431

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR--NCKDEKLGVAIAT 213
            +   R M      P E+  + ++S  +    ++ G+     + R  N + E   V    
Sbjct: 432 TVTFFRTMVSDAFSPDEITFVGLLSACSHGGLLEAGEYYFEAMARVYNVEPE---VEHYG 488

Query: 214 ALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            ++D+  + G+LA A  L   ++ +  VV W               G  L A  I  NV 
Sbjct: 489 CMVDLLGRRGHLAKAVNLIKDMSIKPDVVVW---------------GALLGACRIHGNVE 533

Query: 273 PSEITILSLIIECGFVGGL 291
             ++ I  L+   G  GGL
Sbjct: 534 IGKLVIKQLLELEGITGGL 552


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 198/598 (33%), Positives = 318/598 (53%), Gaps = 13/598 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++ +          +N +  M   G + +  +   IL AC+       G++IH   +
Sbjct: 405 WNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLIL 464

Query: 99  KNGLDG-DAYVSNALIQMYSECGSLVSARYLFDEMP--NRDVVSWSTMIRGYHRGGLPEE 155
               D  ++ V+  L+ MY +CGS+  A  +F EMP  +R +V+W+ M+  Y +    +E
Sbjct: 465 TRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKE 524

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK--LGVAIAT 213
           A   + EM    + P  ++  S++S            +  A V+R C  E       + T
Sbjct: 525 AFGALMEMLQGGVLPDALSFTSVLS--------SCYCSQEAQVLRMCILESGYRSACLET 576

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALI M+ +C  L  A+ +F+ ++   VVSWT M+S      +  E   LF  M  E V P
Sbjct: 577 ALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIP 636

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
            + T+ + +  C     L LGK +HA +   G E  +A+ NAL++MY  C + R A + F
Sbjct: 637 DKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFF 696

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + MK++D++ WN + +AYAQA    +A  LF HM++  V+P+++T    L++   +  + 
Sbjct: 697 ETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVS 756

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            GK  H    + GL+ DV + T LV +YAKCG ++ A  LF  A    + + NA++    
Sbjct: 757 DGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALA 816

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            HG  EEA+  F  M++ GV+P+  T + +++AC HAG+V EG S F  M    G+ P +
Sbjct: 817 QHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTL 876

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHY C VDLLGRAG L+ A ++I+ MP   N +VW +LL   KL  +  +GE  A +ILE
Sbjct: 877 EHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILE 936

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           ++P N   +V++SNIY    +W D    R+ + +  VK  PG S +E+   VH+F+ G
Sbjct: 937 LDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAG 994



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 148/530 (27%), Positives = 263/530 (49%), Gaps = 25/530 (4%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +L++C        GK  H      GL+   ++ N LI MY  CGSL  A  +F +M  R+
Sbjct: 31  LLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERN 90

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRF-MDIRPSEVAMISMVSLFADVADVDLGKAIH 195
           VVSW+ +I    + G    A  + R M       P+   +++M++  A+  D+ +G++IH
Sbjct: 91  VVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIH 150

Query: 196 ACV--VRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           A +  +   ++      +  A+I+MY+KCG+   A  +F  + +  VVSWT M   Y + 
Sbjct: 151 AMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQE 210

Query: 254 NEI-NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
                + +R+F EM+ + + P+ IT ++ +  C     L+ G WLH+ +   G  F    
Sbjct: 211 RRFYPDALRIFREMLLQPLAPNVITFITALGAC---TSLRDGTWLHSLLHEAGLGFDPLA 267

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSK---DVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
            NAL++MYGKC +   A  +F  M S+   D++ WNA+ISA  +A     A  +F  +++
Sbjct: 268 GNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRL 327

Query: 370 SKVRPNEVTMVGLLSLCTEAGA-LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
             +RPN VT++ +L+    +G      +  H  I + G   DV++  A++ MYAKCG  +
Sbjct: 328 EGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFS 387

Query: 429 GAYRLFSEAIYR-DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
            A+ +F    ++ D+  WN M+          + +  F  M  +G+ PN ++FI +LNAC
Sbjct: 388 AAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNAC 447

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC-----MVDLLGRAGLLDEAHEMIKSMPLR 542
           S++  +      F + +H L L  + ++        +V + G+ G + EA  + K MPL 
Sbjct: 448 SNSEALD-----FGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLP 502

Query: 543 P-NMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMSNIY 589
             +++ W  +L A   +        A  ++L+  + P    +  ++S+ Y
Sbjct: 503 SRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCY 552



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 162/639 (25%), Positives = 285/639 (44%), Gaps = 70/639 (10%)

Query: 22  KTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN-FTIPTILKA 80
           + H  FS     N ++ + +L+++  ++   + A  ++  M    S   N +T+  +L A
Sbjct: 78  EAHAIFSKMEERNVVS-WTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNA 136

Query: 81  CAQVLMTHLGKEIHGFAIKNGLDGDA----YVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           CA      +G+ IH    + GL+ ++     V NA+I MY++CGS   A  +F  +P +D
Sbjct: 137 CANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKD 196

Query: 137 VVSWSTMIRGY--HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           VVSW+ M   Y   R   P +AL + REM    + P+ +  I+ +     + D   G  +
Sbjct: 197 VVSWTAMAGAYAQERRFYP-DALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWL 252

Query: 195 HACVVRNCKDEKLGVA--IATALIDMYSKCGNLAYAKQLFNRL---NQNSVVSWTVMISG 249
           H+ +     +  LG       ALI+MY KCG+   A  +F  +    +  +VSW  MIS 
Sbjct: 253 HSLL----HEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISA 308

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG--KWLHAYILRNGFE 307
            +      + + +F  +  E + P+ +T+++ I+      G+  G  +  H  I  +G+ 
Sbjct: 309 SVEAGRHGDAMAIFRRLRLEGMRPNSVTLIT-ILNALAASGVDFGAARKFHGRIWESGYL 367

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIH 366
             + + NA++ MY KC    +A T+F  ++ K DV+ WN ++ A        K    F H
Sbjct: 368 RDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHH 427

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE-VDVILKTALVDMYAKCG 425
           M ++ + PN+V+ + +L+ C+ + AL+ G+ +H+ I  +  + V+  + T LV MY KCG
Sbjct: 428 MLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCG 487

Query: 426 DVNGAYRLFSEAIY--RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
            +  A  +F E     R +  WN M+  Y  +   +EA    ++M + GV P+ ++F  +
Sbjct: 488 SIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSV 547

Query: 484 L----------------------NACSHAGLVT---------EGKSVFDKMVHGLGLVPK 512
           L                      +AC    L++         + +SVFD+M HG      
Sbjct: 548 LSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFDEMDHG-----D 602

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLR---PNMIVWGALLAASKLHKNPSMGEIAAT 569
           +  +  MV          E H + + M L    P+       L          +G+I   
Sbjct: 603 VVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHA 662

Query: 570 QILEI--EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMK 606
            + EI  E      N L+ N+Y+    W +       MK
Sbjct: 663 CVTEIGLEADIAVENALL-NMYSNCGDWREALSFFETMK 700



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 145/286 (50%), Gaps = 16/286 (5%)

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           +L+  C     L  GK  H  I   G E  L + N L++MY +C  +  A  +F  M+ +
Sbjct: 30  ALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEER 89

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKV-SKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +V+ W A+ISA AQ+    +AF LF  M + S   PN  T+V +L+ C  +  L +G+ +
Sbjct: 90  NVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSI 149

Query: 399 HTYIEKQGLEVDVILKT----ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           H  I + GLE +    T    A+++MYAKCG    A  +F     +D+  W AM   Y  
Sbjct: 150 HAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQ 209

Query: 455 H-GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH--GLGLVP 511
                 +AL  F +M    + PN ITFI  L AC+    + +G +    ++H  GLG  P
Sbjct: 210 ERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDG-TWLHSLLHEAGLGFDP 265

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP--NMIVWGALLAAS 555
              +   ++++ G+ G  + A+ + K+M  R   +++ W A+++AS
Sbjct: 266 LAGN--ALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISAS 309



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 120/285 (42%), Gaps = 16/285 (5%)

Query: 25  FKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV 84
             F  T     L  +N +  +Y +      A+ ++  M+  G + D  T  T L      
Sbjct: 693 LSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGS 752

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
            +   GK  HG A ++GLD D  V+  L+++Y++CG L  A  LF       VV  + +I
Sbjct: 753 ALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAII 812

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
               + G  EEA+++  +M+   +RP    ++S++S       V+ G     C       
Sbjct: 813 GALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEG-----CSSFLTMK 867

Query: 205 EKLGVAIA----TALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEG 259
           E  G++         +D+  + G L +A+Q+  ++  +++ + WT ++       +   G
Sbjct: 868 EYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELG 927

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
            R    ++E +   S   ++   I C        GKW  A + R 
Sbjct: 928 ERCAQRILELDPHNSAAHVVLSNIYCA------TGKWKDADVDRK 966


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 219/690 (31%), Positives = 356/690 (51%), Gaps = 54/690 (7%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHF-KFSYTNIINPLTR--------------------- 38
           +K   G   L   +Q HAH+ K  +  FS   I N L                       
Sbjct: 17  LKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKCGGLGDAYKVFDRITER 76

Query: 39  ----YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH---LGK 91
               +NS++++  +  +   A+  +  M   G E  +FT+ ++  AC+ +       LGK
Sbjct: 77  DQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDGLWLGK 136

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           +IHG   + G     + +NAL+ MY++ G L  A+ L     +RD+V+W++MI  + +  
Sbjct: 137 QIHGCCFRKG-HWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNE 195

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
              EAL  +R M    ++P  V   S++   + +  +  GK IHA  +R   D      +
Sbjct: 196 RFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRT-DDVIENSFV 254

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
            +AL+DMY  CG +   + +F+ +    +  W  MI+GY +     + + LF EM     
Sbjct: 255 GSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAG 314

Query: 272 FPSEITILSLIIECGF-VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
             S  T +S I+       G+   + +H Y+++ G E +  + NAL+DMY +  +I++++
Sbjct: 315 LYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSK 374

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM----------------KVSKVRP 374
            +FD M+ +D++ WN +I++Y        A  L   M                K    +P
Sbjct: 375 RIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKP 434

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           N +T++ +L  C    AL  GK +H Y  +  L   V + +ALVDMYAKCG +N A R+F
Sbjct: 435 NSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVF 494

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG-----VKPNGITFIGLLNACSH 489
            +   R++  WN ++  YGMHG G+E+L  F DM   G     VKP  +TFI L  +CSH
Sbjct: 495 DQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSH 554

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI-VW 548
           +G+V EG S+F KM +  G+ P  +HY C+VDL+GRAG ++EA+ ++ +MP   + +  W
Sbjct: 555 SGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAW 614

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
            +LL A +++ N  +GEIAA  +L+++P    + VL+SNIY+ A  W+    +RR MK +
Sbjct: 615 SSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAM 674

Query: 609 RVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
            VKKEPG S +E    VHKF+ G + + +S
Sbjct: 675 GVKKEPGCSWIEYGDEVHKFLAGDLSHPQS 704



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 162/521 (31%), Positives = 254/521 (48%), Gaps = 30/521 (5%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVS--NALIQMYSEC 119
           M  +G   DNF  P +LKA A +   +LGK+IH    K G    + V+  N L+ MY +C
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV 179
           G L  A  +FD +  RD VSW+++I    R    E A++  R M      PS   ++SM 
Sbjct: 61  GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120

Query: 180 SLFADVADVD---LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLN 236
              +++   D   LGK IH C  R             AL+ MY+K G L  AK L     
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFRKGHWRTFS---NNALMAMYAKLGRLDDAKSLLVLFE 177

Query: 237 QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
              +V+W  MIS + +     E +     M+ E V P  +T  S++  C  +  L+ GK 
Sbjct: 178 DRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKE 237

Query: 297 LHAYILRNG--FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
           +HAY LR     E S  + +ALVDMY  C ++ S R +FD +  + + +WNA+I+ YAQ+
Sbjct: 238 IHAYALRTDDVIENSF-VGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQS 296

Query: 355 HCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
              +KA  LFI M+ +  +  N  TM  ++        +   + +H Y+ K+GLE +  L
Sbjct: 297 EHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYL 356

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER--- 470
           + AL+DMY++ GD+  + R+F     RDI  WN ++  Y + G   +AL+   +M+R   
Sbjct: 357 QNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEE 416

Query: 471 -------------SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
                           KPN IT + +L  C+    + +GK +    +  L L  ++    
Sbjct: 417 KSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNL-LASQVTVGS 475

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            +VD+  + G L+ A  +   MP+R N+I W  ++ A  +H
Sbjct: 476 ALVDMYAKCGCLNLARRVFDQMPIR-NVITWNVIIMAYGMH 515


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 187/594 (31%), Positives = 329/594 (55%), Gaps = 4/594 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +++++   ++N++    L ++  M+K G  V      ++ ++CA +    +G ++H  A+
Sbjct: 245 WSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHAL 304

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K     D  V  A + MY++CGSL  A+ +F+ +P   +  ++ +I G  R     EAL+
Sbjct: 305 KCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQ 364

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADV-ADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
             + +    +  +E+++    S  A +  D+D G+ +H+  V++    +  + +A +++D
Sbjct: 365 FFQLLLKSGLGFNEISLSGAFSACASIKGDLD-GRQLHSLSVKSTL--RSNICVANSILD 421

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY KC  L+ A  +F+ + +   VSW  +I+ + +     E + LFA M+   + P + T
Sbjct: 422 MYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFT 481

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             S++  C     L  G  +H  I+++G      +  AL+DMY KC  I  A+ + D ++
Sbjct: 482 YGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIE 541

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            + ++ WNA+I+ +      + A   F  M    V+P+  T   +L  C    ++ +GK 
Sbjct: 542 QQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQ 601

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H  I K  L  DV + + LVDMY+KCG++  +  +F +A  +D   WNAM+ GY  HG 
Sbjct: 602 IHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGL 661

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           GEEAL +F  M+   V+PN  TF+ +L AC+H G + +G   F+ M+   GL P+IEHY 
Sbjct: 662 GEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYS 721

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CM+D++GR+G + EA ++I+ MP   + ++W  LL+  K+H N  + E A   IL++EP+
Sbjct: 722 CMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPE 781

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +    +L+SNIYA A  W  V+ +R++M+  ++KKEPG S +EV   VH F+ G
Sbjct: 782 DSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVG 835



 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 291/556 (52%), Gaps = 7/556 (1%)

Query: 26  KFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFM-RKNGSEVDNFTIPTILKACAQV 84
           +F Y      +  +NS+++ +++N +   +++++  M R      D  T   +LKAC+ +
Sbjct: 130 EFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVL 189

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
               LG ++HG  ++ G   D    +AL+ MY++C  L  +  +F E+P ++ V WS +I
Sbjct: 190 EDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAII 249

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
            G  +       LE+ +EM+ + I  S+    S+    A ++ + +G  +HA  ++ C D
Sbjct: 250 AGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALK-C-D 307

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
               + + TA +DMY+KCG+LA A+++FN L ++S+  +  +I G +R  +  E ++ F 
Sbjct: 308 FGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQ 367

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
            +++  +  +EI++      C  + G   G+ LH+  +++    ++ +AN+++DMYGKC 
Sbjct: 368 LLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCE 427

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            +  A  +FD M+ +D + WNAVI+A+ Q    ++   LF  M   ++ P++ T   +L 
Sbjct: 428 ALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLK 487

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
            C+   AL  G  +H  I K GL +D  +  AL+DMY KCG +  A ++      + +  
Sbjct: 488 ACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVS 547

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           WNA++AG+ +    E+A  FF +M +  VKP+  T+  +L+AC++   V  GK +  +++
Sbjct: 548 WNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQII 607

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH--KNPS 562
             L L   +     +VD+  + G + ++  + +  P   + + W A++     H     +
Sbjct: 608 K-LELHSDVYITSTLVDMYSKCGNMQDSALVFEKAP-NKDFVTWNAMICGYAQHGLGEEA 665

Query: 563 MGEIAATQILEIEPQN 578
           +G     Q+  + P +
Sbjct: 666 LGYFERMQLENVRPNH 681



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 154/585 (26%), Positives = 283/585 (48%), Gaps = 48/585 (8%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPT-------ILKACAQVLMTHLGKEIH 94
           L+ S I  NK    L I+ F   +  + +   +PT       I++ C+       GK+ H
Sbjct: 10  LIASRILYNK---TLRIFTFCTISTLQQNQTKLPTKIRTFSHIIQECSDYNSLKPGKQAH 66

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
              I +G   D Y+SN L++MY  C  L  A  +F++M  RDV+S++TMI GY   G   
Sbjct: 67  ARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMN 126

Query: 155 EALEVMREMRFMDIRPSEVAMIS----------MVSLFADVA---DVDLGKAIHACVVRN 201
            A E   +    D+  S  +M+S           + +F D+    +V   +   A V++ 
Sbjct: 127 LANEFFYDTPKRDV-VSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKA 185

Query: 202 C---KDEKLGVAI---------------ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSW 243
           C   +D  LG+ +                +AL+DMY+KC  L  + ++F+ +   + V W
Sbjct: 186 CSVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCW 245

Query: 244 TVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
           + +I+G ++ +E   G+ LF EM +  +  S+    S+   C  +  L++G  LHA+ L+
Sbjct: 246 SAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALK 305

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
             F   + +  A +DMY KC  +  A+ +F+ +    +  +NA+I    +     +A + 
Sbjct: 306 CDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQF 365

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F  +  S +  NE+++ G  S C        G+ LH+   K  L  ++ +  +++DMY K
Sbjct: 366 FQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGK 425

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
           C  ++ A  +F E   RD   WNA++A +  +G  EE L  F  M R  ++P+  T+  +
Sbjct: 426 CEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSV 485

Query: 484 LNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
           L ACS    +  G  + ++++  GLGL   +   G ++D+  + G+++EA ++   +  +
Sbjct: 486 LKACSSQQALNSGMEIHNRIIKSGLGLDSFVG--GALIDMYCKCGMIEEAKKIHDRIE-Q 542

Query: 543 PNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLM 585
             M+ W A++A   L K+         ++L+  ++P N+ Y +++
Sbjct: 543 QTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVL 587



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 111/216 (51%), Gaps = 2/216 (0%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
             +  +N+++  +        A + +  M K   + DNFT   +L ACA +    LGK+I
Sbjct: 543 QTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQI 602

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG  IK  L  D Y+++ L+ MYS+CG++  +  +F++ PN+D V+W+ MI GY + GL 
Sbjct: 603 HGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLG 662

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           EEAL     M+  ++RP+    +S++   A +  +D G      ++     E   +   +
Sbjct: 663 EEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEP-QIEHYS 721

Query: 214 ALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMIS 248
            +ID+  + G ++ A +L   +  +   V W  ++S
Sbjct: 722 CMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLS 757


>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 833

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 184/593 (31%), Positives = 331/593 (55%), Gaps = 2/593 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  + +N    ++L  Y   +    +V + +    L AC Q      GK++H  AI
Sbjct: 209 WNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAI 268

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G + D YV  +L+ MY +C  + SA  +F+E+P++++  W+ +I  Y   G   +AL 
Sbjct: 269 KVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALR 328

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + ++M+   +      ++++++  +     DLG+ IH  +V+  +  +  + I +AL+ M
Sbjct: 329 IYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVK--RPLQSSITIQSALLTM 386

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSK G+  YA  +F+ + +  VV+W  +ISG+ +  +  E +  F  M  + V P    +
Sbjct: 387 YSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIM 446

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S+I  C  +  + LG  +H +++++G +  + +A++L+DMY K      A  +F  M  
Sbjct: 447 ASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPL 506

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K+++ WN++IS Y + +  D +  LF  +  + + P+ V+   +L+  +   AL  GK +
Sbjct: 507 KNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSV 566

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H Y+ +  +  D+ ++  L+DMY KCG +  A  +F     +++  WN+M+ GYG HG  
Sbjct: 567 HGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGEC 626

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            +A+  F +M  SG+KP+ +TF+ LL++C+H+GL+ EG  +F+ M    G+ P++EHY  
Sbjct: 627 SKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVN 686

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           +VDL GRAG L +A+  +K+MP+ P+  +W +LL + K+H N  +GE+ A ++L +EP  
Sbjct: 687 IVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSK 746

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               V + N+Y  A  W+  A +R  MKE  +KK PG S +EV   V  F  G
Sbjct: 747 GSNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWIEVRNKVDVFYSG 799



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 157/558 (28%), Positives = 279/558 (50%), Gaps = 35/558 (6%)

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           + S ++  +   AL +Y    K+      FT P++LKACA +     GK IH   I  GL
Sbjct: 28  IKSLVQQRQYIEALKLYT---KSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGL 84

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNR-----DVVSWSTMIRGYHRGGLPEEAL 157
             D Y++++LI +Y +CG+   A  +FD++P       DV  W+++I GY R G  EE +
Sbjct: 85  HSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFGQLEEGM 144

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
                M+    +                     GK IH+ +VRN  +      + TALID
Sbjct: 145 VQFGRMQSSGYKE--------------------GKQIHSYIVRNMLN--FDPFLETALID 182

Query: 218 MYSKCGNLAYAKQLFNRL-NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
            Y KCG    A+ LF +L +++++V+W VMI G+         +  +     ENV     
Sbjct: 183 TYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSS 242

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           +    +  CG    +  GK +H   ++ GFE    +  +L+ MYGKC+ I SA  +F+ +
Sbjct: 243 SFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEV 302

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             K++ +WNA+ISAY        A  ++  MK+  V  +  T++ +L+  + AG  ++G+
Sbjct: 303 PDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGR 362

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +HT I K+ L+  + +++AL+ MY+K GD N A  +FS    RD+  W ++++G+  + 
Sbjct: 363 LIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNR 422

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             +EAL FF  ME   VKP+      +++AC+    V  G ++   ++   GL   +   
Sbjct: 423 KYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKS-GLQLDVFVA 481

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL--EI 574
             ++D+  + G  + A  +   MPL+ N++ W ++++    +  P +     +Q+L  ++
Sbjct: 482 SSLLDMYSKFGFPERAGNIFSDMPLK-NLVAWNSIISCYCRNNLPDLSINLFSQVLRNDL 540

Query: 575 EPQNYGYNVLMSNIYAVA 592
            P +  +  +++ I +VA
Sbjct: 541 YPDSVSFTSVLAAISSVA 558


>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
          Length = 549

 Score =  360 bits (923), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 188/522 (36%), Positives = 303/522 (58%), Gaps = 12/522 (2%)

Query: 115 MYSECGSLVSARYLF-DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEV 173
           MYS+C  +  A  +F D     +V +++ +I G+   G PEE  E  ++MR   + P + 
Sbjct: 1   MYSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKF 60

Query: 174 AMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFN 233
                +    DV ++   K IH  + +     +L V I +AL++ Y K G + +A+  F 
Sbjct: 61  TFPCAIKACLDVLEI---KKIHGLLFK--FGLELDVFIGSALVNCYLKFGLMEHAQVAFE 115

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL 293
            L    VV W  M++GY +  +    +  F  M +E+V PS  T+  ++     +G L  
Sbjct: 116 ELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNN 175

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           G+ +H + ++ G++  +A++N+L+DMYGKC+ I  A  +F+ M+ KD+  WN++ S + Q
Sbjct: 176 GRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQ 235

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY-----IEKQGLE 408
               D    L   M  + ++P+ VT+  +L  C+   AL  G+ +H Y     + K G +
Sbjct: 236 CGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKD 295

Query: 409 VD-VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
           +D V+LK A++DMYAKCG +  A+ +F     +D+  WN M+ GYGMHG G EAL  F  
Sbjct: 296 IDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSR 355

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           M    +KP+ +TF+G+L+ACSHAG V++G++   +M     + P IEHY C++D+LGRAG
Sbjct: 356 MCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAG 415

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSN 587
            LDEA+E+  +MP+  N +VW ALLAA +LHK+  + E+AA ++ E+EP++ G  VLMSN
Sbjct: 416 QLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSN 475

Query: 588 IYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +Y    R+ +V  VR  M++  V+K PG S +E+   VH F+
Sbjct: 476 VYGAVGRYEEVLEVRHTMRQQNVRKTPGCSWIELKNGVHVFV 517



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/425 (31%), Positives = 226/425 (53%), Gaps = 13/425 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++++ +I N  P      Y  MR  G   D FT P  +KAC  VL     K+IHG   
Sbjct: 27  FNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI---KKIHGLLF 83

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+ D ++ +AL+  Y + G +  A+  F+E+P RDVV W+ M+ GY + G  E  LE
Sbjct: 84  KFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLE 143

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             R M    + PS   +  ++S+FA + D++ G+ IH   ++   D   GVA++ +LIDM
Sbjct: 144 TFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDS--GVAVSNSLIDM 201

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC  +  A ++F  + +  + SW  + S + +C + +  +RL   M+   + P  +T+
Sbjct: 202 YGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTV 261

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEF------SLAMANALVDMYGKCREIRSARTL 332
            +++  C  +  L  G+ +H Y++ +G          + + NA++DMY KC  +R A  +
Sbjct: 262 TTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLV 321

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ M +KDV  WN +I  Y      ++A E+F  M   +++P+EVT VG+LS C+ AG +
Sbjct: 322 FERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFV 381

Query: 393 EMGK-WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL-FSEAIYRDICMWNAMMA 450
             G+ +L     K  +   +   T ++DM  + G ++ AY L  +  I  +  +W A++A
Sbjct: 382 SQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLA 441

Query: 451 GYGMH 455
              +H
Sbjct: 442 ACRLH 446



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 163/326 (50%), Gaps = 10/326 (3%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I  +  +N++V  Y +  +    L  +  M         FT+  IL   A +   + G+ 
Sbjct: 119 IRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRI 178

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IHGFA+K G D    VSN+LI MY +C  +  A  +F+ M  +D+ SW+++   + + G 
Sbjct: 179 IHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGD 238

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV-----RNCKDEKL 207
            +  L ++  M    I+P  V + +++   + +A +  G+ IH  ++     ++ KD   
Sbjct: 239 HDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDID- 297

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            V +  A+IDMY+KCG++  A  +F R+    V SW +MI GY      NE + +F+ M 
Sbjct: 298 DVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMC 357

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN--ALVDMYGKCRE 325
           E  + P E+T + ++  C   G +  G+   A  +++ ++ +  + +   ++DM G+  +
Sbjct: 358 EVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQ-MKSKYDVAPTIEHYTCVIDMLGRAGQ 416

Query: 326 IRSARTLFDGMK-SKDVMIWNAVISA 350
           +  A  L   M    + ++W A+++A
Sbjct: 417 LDEAYELALTMPIEANPVVWRALLAA 442


>gi|326495618|dbj|BAJ85905.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 788

 Score =  359 bits (922), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 195/576 (33%), Positives = 321/576 (55%), Gaps = 9/576 (1%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG-DAYVSNALIQMYSECGSLVSARYL 128
           D FT P +LK CA++     G+  H  AI+ G+   D Y  N+L+  Y+  G +  A  +
Sbjct: 107 DRFTFPVVLKCCARLGALDEGRAAHSAAIRLGVAAADVYTGNSLLAFYARLGLVDDAERV 166

Query: 129 FDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVAD 187
           FD MP RDVV+W++M+ GY   GL   AL   REM   ++++   V +I+ ++     + 
Sbjct: 167 FDGMPARDVVTWNSMVDGYVSNGLGTLALVCFREMHEALEVQHDGVGIIAALAACCLESA 226

Query: 188 VDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           +  G+ +HA V+R+  +    V + T+++DMY KCG++A A+ +F  +   +VV+W  MI
Sbjct: 227 LMQGREVHAYVIRHGMEHD--VKVGTSILDMYCKCGDIASAEGVFATMPSRTVVTWNCMI 284

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
            GY       E    F +M  E      +T ++L+  C        G+ +H YI R  F 
Sbjct: 285 GGYALNERPEEAFDCFVQMKAEGHQVEVVTAINLLAACAQTESSLYGRSVHGYITRRQFL 344

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             + +  AL++MY K  +++S+  +F  M +K ++ WN +I+AY       +A  LF+ +
Sbjct: 345 PHVVLETALLEMYSKVGKVKSSEKVFGQMTTKTLVSWNNMIAAYMYKEMYMEAITLFLDL 404

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
               + P+  TM  ++      G L   + +H+YI + G   + ++  A++ MYA+CGDV
Sbjct: 405 LNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHSYIIRLGYGENTLIMNAIMHMYARCGDV 464

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             +  +F +   +D+  WN M+ GY +HG G  AL  F +M+ +G++PN  TF+ +L AC
Sbjct: 465 LSSREIFDKMAAKDVISWNTMIMGYAIHGQGRSALEMFSEMKCNGLRPNESTFVSVLTAC 524

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           S +GL  EG + F+ M    G++P+IEHYGCM DLLGRAG L E  + I++MP+ P   V
Sbjct: 525 SVSGLTDEGWTQFNSMQRDYGMIPQIEHYGCMTDLLGRAGDLKEVMQFIENMPIDPTFRV 584

Query: 548 WGALLAASKLHKNPSMGEIAATQILEIEP-----QNYGYNVLMSNIYAVANRWNDVAGVR 602
           WG+LL AS+   +  + E AA +I ++E       N G  VL+S++YA A RW DV  ++
Sbjct: 585 WGSLLTASRNRNDIDIAEYAAERIFQLEQDQLEHDNTGCYVLISSMYADAGRWKDVERIK 644

Query: 603 RVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
            +M+E  +++    S VE++G+   F+ G   + +S
Sbjct: 645 SLMEEKGLRRTDPRSIVELHGISCSFVNGDTTHPQS 680



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 82/145 (56%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++ +Y+       A+ ++  +       D FT+  ++ A   + +    +++H 
Sbjct: 378 LVSWNNMIAAYMYKEMYMEAITLFLDLLNQPLYPDYFTMSAVVPAFVLLGLLRQCRQMHS 437

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + I+ G   +  + NA++ MY+ CG ++S+R +FD+M  +DV+SW+TMI GY   G    
Sbjct: 438 YIIRLGYGENTLIMNAIMHMYARCGDVLSSREIFDKMAAKDVISWNTMIMGYAIHGQGRS 497

Query: 156 ALEVMREMRFMDIRPSEVAMISMVS 180
           ALE+  EM+   +RP+E   +S+++
Sbjct: 498 ALEMFSEMKCNGLRPNESTFVSVLT 522



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 3/138 (2%)

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           +LV  +A  G ++ A    + A  RD  + N ++ G    G    AL  +  M  +G +P
Sbjct: 47  SLVLSHAAAGRMDDAQEALAAAGSRDAFLHNVVIRGLADAGLPGAALAAYAAMLAAGARP 106

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG-CMVDLLGRAGLLDEAHE 534
           +  TF  +L  C+  G + EG++     +  LG+     + G  ++    R GL+D+A  
Sbjct: 107 DRFTFPVVLKCCARLGALDEGRAAHSAAIR-LGVAAADVYTGNSLLAFYARLGLVDDAER 165

Query: 535 MIKSMPLRPNMIVWGALL 552
           +   MP R +++ W +++
Sbjct: 166 VFDGMPAR-DVVTWNSMV 182


>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial [Vitis vinifera]
          Length = 828

 Score =  359 bits (922), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 196/603 (32%), Positives = 335/603 (55%), Gaps = 20/603 (3%)

Query: 26  KFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQV 84
           +  Y +I++    +N+++     N +   A ++   M+  G  + D+ T+  I+  CA++
Sbjct: 236 EMKYKDIVS----WNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAEL 291

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
           ++   G+ +HG  ++  +  D  V+N+LI MYS+C  +  A ++F  +P RD+VSW+ MI
Sbjct: 292 MLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMI 351

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
            GY + G   EA  + R++     + S   +++++        +  G++IH      C  
Sbjct: 352 SGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGESIH------CWQ 405

Query: 205 EKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNS-VVSWTVMISGYIRCNEINEG 259
            KLG A       +L+ MY  CG+L     L   ++  + +V W  +++G  +     E 
Sbjct: 406 LKLGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEA 465

Query: 260 VRLFAEMIEE-NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
           ++ F  M ++ +V    + + ++I  CG +  L  G  LH   L+   E  + + NAL+ 
Sbjct: 466 LKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNALIT 525

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
           MYG+C EI +AR +F    ++++  WN +ISA++Q     +A ELF H++     PNE+T
Sbjct: 526 MYGRCGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRRALELFCHIEF---EPNEIT 582

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
           +VG+LS CT+ G L  GK +H ++ +  L+ +  +  AL DMY+ CG ++ A+++F  + 
Sbjct: 583 IVGILSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSP 642

Query: 439 YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKS 498
            R +  WN+M++ +G H  G +A+  F +M   G +P   TFI LL+ACSH+GLV EG  
Sbjct: 643 ERSVAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSGLVNEGLW 702

Query: 499 VFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            +  M+    +    EH+ CMVD+LGRAG L EA+E I+ MP +P   VWGALL+A   H
Sbjct: 703 YYSNMLELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQPEPGVWGALLSACSYH 762

Query: 559 KNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSS 618
            +  MG   A  + E+EP+N GY + +SN+Y  A RW D   +RR++++  +KK   +S 
Sbjct: 763 GDLKMGREVAELLFELEPENVGYYISLSNMYVAAGRWKDAVELRRIIQDKGLKKPAAYSL 822

Query: 619 VEV 621
           ++V
Sbjct: 823 IDV 825



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 268/529 (50%), Gaps = 13/529 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++T+ ++N     A+N++  +   G  +D+ T+  ++ A + +     G+ +HG + 
Sbjct: 41  WNAMITASVENQCFGVAVNLFVELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISF 100

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL  D+++ NALI MY++CG L S+  +F  M  RD++SW++M+RG      P+++L 
Sbjct: 101 KTGLLSDSFLCNALIDMYAKCGELSSSECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLW 160

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             ++M +   +   V++   VS  A + ++  G+ IH   ++    +    +   +LI +
Sbjct: 161 YFKKMAYSSEQADNVSLTCAVSASALLGELSFGQVIHGWGIKLGYKDISHNSFENSLISL 220

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM-IEENVFPSEIT 277
           YS+C ++  A+ LF  +    +VSW  M+ G      I E   L  EM +   V P  +T
Sbjct: 221 YSQCRDIQAAEILFKEMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVT 280

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++ +I  C  +  L+ G+ +H   LR       ++ N+L+DMY KC++++ A  +F  + 
Sbjct: 281 VVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIP 340

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +D++ WNA+IS Y+Q     +A  LF  +  S  + +  T++ +L  C  +  L+ G+ 
Sbjct: 341 ERDLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGES 400

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
           +H +  K G   + +   +L+ MY  CGD+   + L    +   DI  WN +MAG   +G
Sbjct: 401 IHCWQLKLGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNG 460

Query: 457 CGEEALIFFVDMERS-GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
              EAL  F  M +   V  + +    +++AC +  L+  G S     +HGL L   +E 
Sbjct: 461 HFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGS-----LHGLALKTLMES 515

Query: 516 ----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
                  ++ + GR G ++ A  +I       N+  W  +++A   +K+
Sbjct: 516 DIRVQNALITMYGRCGEIENA-RIIFGFSCNRNLCSWNCMISAFSQNKD 563



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 200/397 (50%), Gaps = 9/397 (2%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
            S +L+  YS      S+  LFDE+  RDV+ W+ MI           A+ +  E+    
Sbjct: 9   TSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEG 68

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALIDMYSKCGNL 225
           +      ++ +VS  + + ++  G+ +H    +     D  L      ALIDMY+KCG L
Sbjct: 69  VGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFL----CNALIDMYAKCGEL 124

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
           + ++ +F  +    ++SW  M+ G    N   + +  F +M   +     +++   +   
Sbjct: 125 SSSECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSAS 184

Query: 286 GFVGGLQLGKWLHAYILRNGFE--FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
             +G L  G+ +H + ++ G++     +  N+L+ +Y +CR+I++A  LF  MK KD++ 
Sbjct: 185 ALLGELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVS 244

Query: 344 WNAVISAYAQAHCIDKAFELFIHMK-VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
           WNA++   A    I +AF+L   M+ +  V+P+ VT+V ++ LC E   L  G+ +H   
Sbjct: 245 WNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLT 304

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
            ++ + +D  +  +L+DMY+KC DV  A  +F     RD+  WNAM++GY  +G   EA 
Sbjct: 305 LRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQ 364

Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
             F  + +S  + +  T + +L +C  +  +  G+S+
Sbjct: 365 HLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGESI 401



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 185/377 (49%), Gaps = 15/377 (3%)

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           +  +T+L+  YS+  + + +  LF+ +    V+ W  MI+  +        V LF E++ 
Sbjct: 7   LPTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMG 66

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
           E V     T+L ++     +G L  G+ LH    + G      + NAL+DMY KC E+ S
Sbjct: 67  EGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSS 126

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           +  +F GM+ +D++ WN+++   A  +   K+   F  M  S  + + V++   +S    
Sbjct: 127 SECVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASAL 186

Query: 389 AGALEMGKWLHTYIEKQGLEVDV---ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
            G L  G+ +H +  K G + D+     + +L+ +Y++C D+  A  LF E  Y+DI  W
Sbjct: 187 LGELSFGQVIHGWGIKLGYK-DISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSW 245

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           NAM+ G  ++    EA     +M+  G V+P+ +T + ++  C+   L+ EG++     V
Sbjct: 246 NAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRA-----V 300

Query: 505 HGLGLVPKI----EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
           HGL L  ++         ++D+  +   +  A  + K++P R +++ W A+++    + +
Sbjct: 301 HGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPER-DLVSWNAMISGYSQNGH 359

Query: 561 PSMGEIAATQILEIEPQ 577
               +    Q+L+   Q
Sbjct: 360 SREAQHLFRQLLQSYSQ 376


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  359 bits (922), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 190/603 (31%), Positives = 325/603 (53%), Gaps = 2/603 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +++++  Y++N++    L ++  M K G  V   T  ++ ++CA +    LG ++HG
Sbjct: 204 LVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHG 263

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+K+    D+ +  A + MY++C  +  A  +F+ +PN    S++ +I GY R     +
Sbjct: 264 HALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLK 323

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           ALE+ + ++   +   E+++   ++  + +     G  +H   V+ C      + +A  +
Sbjct: 324 ALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQLHGLAVK-C-GLGFNICVANTI 381

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY KCG L  A  +F+ + +   VSW  +I+ + +  EI + + LF  M+   + P +
Sbjct: 382 LDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDD 441

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T  S++  C     L  G  +H  I+++G      + +ALVDMYGKC  +  A  + D 
Sbjct: 442 FTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDR 501

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++ K  + WN++IS ++     + A   F  M    V P+  T   +L +C     +E+G
Sbjct: 502 LEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELG 561

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           K +H  I K  L  DV + + LVDMY+KCG++  +  +F +   RD   W+AM+  Y  H
Sbjct: 562 KQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYH 621

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G GE+A+  F +M+   VKPN   FI +L AC+H G V +G   F  M    GL P +EH
Sbjct: 622 GHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEH 681

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y CMVDLLGR+  ++EA ++I+SM    + ++W  LL+  K+  N  + E A   +L+++
Sbjct: 682 YSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLD 741

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
           PQ+    VL++N+YA    W +VA +R +MK  ++KKEPG S +EV   VH F+ G   +
Sbjct: 742 PQDSSAYVLLANVYANVGMWGEVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAH 801

Query: 636 WKS 638
            +S
Sbjct: 802 PRS 804



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 157/560 (28%), Positives = 283/560 (50%), Gaps = 9/560 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +NSL++ Y+ N     ++ I+  MR      D  T   +LKAC+ +    LG ++H 
Sbjct: 103 VVSWNSLLSCYLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHC 162

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            AI+ G + D    +AL+ MYS+C  L  A  +F EMP R++V WS +I GY +     E
Sbjct: 163 LAIQMGFENDVVTGSALVDMYSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIE 222

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            L++ ++M  + +  S+    S+    A ++   LG  +H   +++  D      I TA 
Sbjct: 223 GLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKS--DFAYDSIIGTAT 280

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+KC  ++ A ++FN L      S+  +I GY R ++  + + +F  +    +   E
Sbjct: 281 LDMYAKCDRMSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDE 340

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           I++   +  C  + G   G  LH   ++ G  F++ +AN ++DMYGKC  +  A T+FD 
Sbjct: 341 ISLSGALTACSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDD 400

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M+ +D + WNA+I+A+ Q   I K   LF+ M  S + P++ T   ++  C    AL  G
Sbjct: 401 MERRDAVSWNAIIAAHEQNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYG 460

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H  I K G+ +D  + +ALVDMY KCG +  A ++      +    WN++++G+   
Sbjct: 461 MEIHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQ 520

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
              E A  +F  M   GV P+  T+  +L+ C++   +  GK +  +++  L L   +  
Sbjct: 521 KQSENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILK-LNLHSDVYI 579

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN--PSMGEIAATQILE 573
              +VD+  + G + ++  M +  P R + + W A++ A   H +   ++      Q+L 
Sbjct: 580 ASTLVDMYSKCGNMQDSRLMFEKTPKR-DYVTWSAMICAYAYHGHGEQAIKLFEEMQLLN 638

Query: 574 IEPQNYGYNVLMSNIYAVAN 593
           ++P    + + +S + A A+
Sbjct: 639 VKP---NHTIFISVLRACAH 655



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 153/550 (27%), Positives = 272/550 (49%), Gaps = 43/550 (7%)

Query: 72  FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE 131
           FT   IL+ C+ +   + GK+ H   I        YV+N L+Q Y +  ++  A  +FD 
Sbjct: 7   FTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDR 66

Query: 132 MPNRDVVSWSTMIRGYHRGG-----------LPE--------------------EALEVM 160
           MP+RDV+SW+TMI GY   G           +PE                    +++E+ 
Sbjct: 67  MPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIF 126

Query: 161 REMRFMDIRPSEVAMISMV-SLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
             MR + I P + A  S+V    + + D  LG  +H   ++   +    V   +AL+DMY
Sbjct: 127 VRMRSLKI-PHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFEND--VVTGSALVDMY 183

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
           SKC  L  A ++F  + + ++V W+ +I+GY++ +   EG++LF +M++  +  S+ T  
Sbjct: 184 SKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYA 243

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           S+   C  +   +LG  LH + L++ F +   +  A +DMY KC  +  A  +F+ + + 
Sbjct: 244 SVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPNP 303

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE-AGALEMGKWL 398
               +NA+I  YA+     KA E+F  ++ + +  +E+++ G L+ C+   G LE G  L
Sbjct: 304 PRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLE-GIQL 362

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    K GL  ++ +   ++DMY KCG +  A  +F +   RD   WNA++A +  +   
Sbjct: 363 HGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEI 422

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYG 517
            + L  FV M RS ++P+  T+  ++ AC+    +  G  +  ++V  G+GL   +    
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVG--S 480

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IE 575
            +VD+ G+ G+L EA E I         + W ++++     K     +   +Q+LE  + 
Sbjct: 481 ALVDMYGKCGMLMEA-EKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVI 539

Query: 576 PQNYGYNVLM 585
           P N+ Y  ++
Sbjct: 540 PDNFTYATVL 549



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 223/427 (52%), Gaps = 10/427 (2%)

Query: 35  PLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL-GKEI 93
           P   YN+++  Y + ++   AL I+  +++     D  ++   L AC+ V+  HL G ++
Sbjct: 304 PRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACS-VIKGHLEGIQL 362

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG A+K GL  +  V+N ++ MY +CG+LV A  +FD+M  RD VSW+ +I  + +    
Sbjct: 363 HGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNEEI 422

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            + L +   M    + P +    S+V   A    ++ G  IH  +V++     L   + +
Sbjct: 423 VKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKS--GMGLDWFVGS 480

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMY KCG L  A+++ +RL + + VSW  +ISG+    +     R F++M+E  V P
Sbjct: 481 ALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIP 540

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T  +++  C  +  ++LGK +HA IL+      + +A+ LVDMY KC  ++ +R +F
Sbjct: 541 DNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLMF 600

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           +    +D + W+A+I AYA     ++A +LF  M++  V+PN    + +L  C   G ++
Sbjct: 601 EKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPNHTIFISVLRACAHMGYVD 660

Query: 394 MGKWLHTYIEKQ---GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMM 449
            G  LH +   Q   GL+  +   + +VD+  +   VN A +L     +  D  +W  ++
Sbjct: 661 KG--LHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLIESMHFEADDVIWRTLL 718

Query: 450 AGYGMHG 456
           +   M G
Sbjct: 719 SNCKMQG 725



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 137/306 (44%), Gaps = 44/306 (14%)

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           + T   ++ +C  +  L  GK  HA ++   F  ++ +AN LV  Y K   +  A  +FD
Sbjct: 6   KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFD 65

Query: 335 GMKSKDVMIWNAVISAYAQ------AHCI-------------------------DKAFEL 363
            M  +DV+ WN +I  YA+      A  +                          K+ E+
Sbjct: 66  RMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEI 125

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F+ M+  K+  +  T   +L  C+      +G  +H    + G E DV+  +ALVDMY+K
Sbjct: 126 FVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDMYSK 185

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
           C  ++GA+R+F E   R++  W+A++AGY  +    E L  F DM + G+  +  T+  +
Sbjct: 186 CKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASV 245

Query: 484 LNACSHAGLVTEGKSVFD--KMVHGLGLVPKIEHYGCM----VDLLGRAGLLDEAHEMIK 537
             +C+       G S F     +HG  L     +   +    +D+  +   + +A ++  
Sbjct: 246 FRSCA-------GLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFN 298

Query: 538 SMPLRP 543
           ++P  P
Sbjct: 299 TLPNPP 304


>gi|297736974|emb|CBI26175.3| unnamed protein product [Vitis vinifera]
          Length = 619

 Score =  359 bits (921), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 220/634 (34%), Positives = 336/634 (52%), Gaps = 63/634 (9%)

Query: 26  KFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVD-NFTIPTILKACAQV 84
           KF + ++I P  ++ S   S +  + P   L  +    K+    D   T+ + LK+C+ +
Sbjct: 8   KFIFGSLI-PNLKWVSAAPSQLPPH-PIDHLRAFFNGNKDTQHSDYELTLVSALKSCSSL 65

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSEC------------------------- 119
           L    G++IH    K+GL  + +V N+LI  Y +C                         
Sbjct: 66  LALSQGQQIHSLVFKSGLLSNIFVKNSLISFYVKCRLISNARSLFDTCSVLDPVSCNIML 125

Query: 120 ------GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEV 173
                 GSL +AR+LF++MP +  VS++TM+ G  +     EA+ V ++MRF  + P+EV
Sbjct: 126 AGYVKSGSLDNARHLFEKMPIKGCVSYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEV 185

Query: 174 AMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLA-YA 228
            + S++S ++ V  +   + +HA         KLG+     +AT L+ MY  C  L   A
Sbjct: 186 TLASVISAYSHVGGILNCRMLHALSF------KLGLEALNIVATNLVHMYCVCSRLVDLA 239

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
           + LF R+    VVSW  +I GY++   + E +R++  M+   V P+E+ I+ LI  CG  
Sbjct: 240 RDLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRT 299

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD-VMIWNAV 347
             +  G+  H  I+R GF+    +   ++  Y  C EI  A   F+ + SKD V  WNA+
Sbjct: 300 MAVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFE-LGSKDHVSSWNAL 358

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           IS + +   I++A +LF  M    V     +   ++S          G+W H YI    +
Sbjct: 359 ISGFVRNGMIEQARQLFDEMPERDV----FSWSSMIS----------GRWAHEYILSNSI 404

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR--DICMWNAMMAGYGMHGCGEEALIFF 465
            ++  L  AL+DMYAKCG +  A +LF E   R   +  WNA++ G  MHG    +L  F
Sbjct: 405 PLNDNLNAALIDMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLF 464

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
             ++R  +KPN ITFIG+L+AC HAGLV  G+  F  M +   + P I+HYGCM+DLLGR
Sbjct: 465 SQLQRVRIKPNSITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGR 524

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLM 585
           AG L EA EMI+ MP++ ++++WG LLAA + H N  +GE AA  + +++  +    VL+
Sbjct: 525 AGRLKEAAEMIRKMPMKADVVIWGTLLAACRTHGNVEIGERAAENLAKLDISHGAGRVLL 584

Query: 586 SNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           SNIYA A RW+D   VRR M+  R+KK PG S V
Sbjct: 585 SNIYADAGRWDDAFLVRRAMQSQRMKKSPGCSGV 618


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  358 bits (920), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 192/594 (32%), Positives = 323/594 (54%), Gaps = 3/594 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +  ++  Y +      AL ++  M++        T   IL ACA       G EIHG  +
Sbjct: 73  WTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQIL 132

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G +GD +V  ALI MY++CGS+  A   F  + +RDVVSW+ MI    +      A  
Sbjct: 133 QQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAACVQHDQFALARW 192

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R M+   + P+++ + ++ + + D   +  GK ++  V     +    V +  + ++M
Sbjct: 193 LYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESD--VRVMNSAVNM 250

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           +   G L  A++LF  +    VV+W ++I+ Y++     E VRLF  + ++ V  ++IT 
Sbjct: 251 FGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITF 310

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           + ++     +  L  GK +H  +   G++    +A AL+ +YG+C     A  +F  M S
Sbjct: 311 VLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQAWKIFVDMGS 370

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KDV+ W  +  AYAQ     +A +LF  M++   RP   T+V +L  C    AL+ G+ +
Sbjct: 371 KDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQI 430

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H++I +    ++++++TAL++MY KCG +  A  +F +   RDI +WN+M+  Y  HG  
Sbjct: 431 HSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYY 490

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +E L  F  M+  GVK + ++F+ +L+A SH+G VT+G   F  M+    + P  E YGC
Sbjct: 491 DETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGC 550

Query: 519 MVDLLGRAGLLDEAHEMIKSMP-LRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           +VDLLGRAG + EA +++  +    P+ I+W  LL A + H      + AA Q+LE +P 
Sbjct: 551 VVDLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPS 610

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           + G  V++SN+YA A  W+ V  +R++M+   VKKEPG SS+E+   VH+F+ G
Sbjct: 611 HSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSSIEILNRVHEFLEG 664



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 255/489 (52%), Gaps = 4/489 (0%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF 129
           D      +L+ C+       G+ +H      G + +  V   LIQMY++CGS+  A+ +F
Sbjct: 3   DTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVF 62

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           + +  +DV +W+ MI  Y + G  + AL +  +M+  D+ P++V  +++++  A    + 
Sbjct: 63  EILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLK 122

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
            G  IH  +++   +    V + TALI+MY+KCG++  A   F RL    VVSWT MI+ 
Sbjct: 123 DGMEIHGQILQQGFEGD--VFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMIAA 180

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
            ++ ++      L+  M  + V P++IT+ ++    G    L  GK+++  +     E  
Sbjct: 181 CVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVMESD 240

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           + + N+ V+M+G    +  AR LF+ M  +DV+ WN VI+ Y Q     +A  LF  ++ 
Sbjct: 241 VRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQ 300

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
             V+ N++T V +L++ T   +L  GK +H  +++ G + D ++ TAL+ +Y +C     
Sbjct: 301 DGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQ 360

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A+++F +   +D+  W  M   Y  +G  +EAL  F +M+  G +P   T + +L+ C+H
Sbjct: 361 AWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAH 420

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
              + +G+ +   ++     +  +     ++++ G+ G + EA  + + M  R +++VW 
Sbjct: 421 LAALQKGRQIHSHIIENRFRMEMVVETA-LINMYGKCGKMAEAMSVFEKMAKR-DILVWN 478

Query: 550 ALLAASKLH 558
           ++L A   H
Sbjct: 479 SMLGAYAQH 487



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 200/386 (51%), Gaps = 4/386 (1%)

Query: 169 RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYA 228
           +P     ++++   +   +VD G+ +H   VR+   E+  + +   LI MY++CG++  A
Sbjct: 1   KPDTAFFVALLQRCSSAKNVDHGRRVH-WHVRDRGFEQNNL-VCGHLIQMYAQCGSVPEA 58

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
           +Q+F  L +  V +WT MI  Y +  + +  + +F +M EE+V P+++T ++++  C   
Sbjct: 59  QQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACAST 118

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
             L+ G  +H  IL+ GFE  + +  AL++MY KC  +R A   F  ++ +DV+ W A+I
Sbjct: 119 ESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMI 178

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
           +A  Q      A  L+  M++  V PN++T+  + +   +   L  GK+++  +    +E
Sbjct: 179 AACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVME 238

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            DV +  + V+M+   G +  A RLF + + RD+  WN ++  Y  +    EA+  F  +
Sbjct: 239 SDVRVMNSAVNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRL 298

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
           ++ GVK N ITF+ +LN  +    + +GK V  ++V   G          ++ L GR   
Sbjct: 299 QQDGVKANDITFVLMLNVYTSLTSLAKGK-VIHELVKEAGYDRDAVVATALMSLYGRCEA 357

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAA 554
             +A ++   M  + ++I W  +  A
Sbjct: 358 PGQAWKIFVDMGSK-DVITWTVMCVA 382


>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 597

 Score =  358 bits (920), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 188/546 (34%), Positives = 311/546 (56%), Gaps = 5/546 (0%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           IL+ C +      G  IH   I+NG D + ++S  LI  Y + G  ++AR +FD MP R+
Sbjct: 43  ILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERN 102

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           VVSW+  I GY + G  ++AL V  +M    +R ++    S++     +  ++ G  IH 
Sbjct: 103 VVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHG 162

Query: 197 CVVRNCKDEKLG-VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
           C+ +N     +G + + +AL+D++SKCGN+  A+ LF  +++  VVSW  +I GY   + 
Sbjct: 163 CIQKN---RFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDF 219

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
            ++  R+F  M+ E V P   T+ S++        L     +H  I++ GF   + +  +
Sbjct: 220 NDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNGS 279

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK-AFELFIHMKVSKVRP 374
           L+D Y K   ++SA  L+  M  KDV+ + A+++ YA+     + A +LF  M+   +  
Sbjct: 280 LIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEI 339

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           ++VT   +L++C +  +L +G+ +H    K     DV    ALVDMYAK G++  A R F
Sbjct: 340 DDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAF 399

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
            E   +++  W +++ GYG HG G EA+  +  ME  G+KPN ITF+ LL ACSH+GL  
Sbjct: 400 YEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTG 459

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           EG   F+ M+    ++P+ EHY CM+DL  R G L+EA+ MI  M ++PN  +WGA+L A
Sbjct: 460 EGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGA 519

Query: 555 SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEP 614
             ++ + S+GE+AAT +L ++P+N    V+++ IYA +  W+    +R +M+   +KK P
Sbjct: 520 CSIYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKACRMRNLMEYRSLKKIP 579

Query: 615 GFSSVE 620
           G+S ++
Sbjct: 580 GYSIIQ 585



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 222/441 (50%), Gaps = 16/441 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + + ++ Y KN     AL +++ M + G   + FT  ++L+AC  +     G +IHG   
Sbjct: 106 WTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHGCIQ 165

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KN   G+ +V +AL+ ++S+CG++  ARYLF+ M  RDVVSW+ +I GY      +++  
Sbjct: 166 KNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFR 225

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATA 214
           +   M    + P    + S++   +   ++     IH  ++      +LG    + +  +
Sbjct: 226 MFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIII------QLGFGSHIDLNGS 279

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR-CNEINEGVRLFAEMIEENVFP 273
           LID Y+K   +  A  L+  + +  V+S+T +++GY R C+   E + LF +M    +  
Sbjct: 280 LIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFMEI 339

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
            ++T  +++  C  +  L +G+ +HA  ++    + +A  NALVDMY K  EI  A   F
Sbjct: 340 DDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSGEIEDATRAF 399

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
             MK K+V+ W ++I+ Y +     +A  L+  M+   ++PN++T + LL  C+ +G   
Sbjct: 400 YEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTG 459

Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA-IYRDICMWNAMMAG 451
            G +  +  I K  +       + ++D++A+ G +  AY +  +  I  +  +W A++  
Sbjct: 460 EGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGA 519

Query: 452 ---YGMHGCGEEALIFFVDME 469
              YG    GE A    + M+
Sbjct: 520 CSIYGHMSLGEVAATHLLRMD 540



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 192/388 (49%), Gaps = 13/388 (3%)

Query: 176 ISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL 235
           + ++ L  +  D+  G  IH+ ++RN  D  L   ++T LI  Y K G    A+++F+R+
Sbjct: 41  MKILQLCIETEDLKQGCLIHSHIIRNGFDSNL--HLSTKLIIFYVKFGETINARKVFDRM 98

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
            + +VVSWT  ISGY +     + + +F++M    V  ++ T  S++  C  +  L+ G 
Sbjct: 99  PERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGM 158

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
            +H  I +N F  +L + +ALVD++ KC  +  AR LF+ M  +DV+ WNAVI  YA   
Sbjct: 159 QIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQD 218

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
             D +F +F  M    V P+  T+  +L   + A  L     +H  I + G    + L  
Sbjct: 219 FNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQIHGIIIQLGFGSHIDLNG 278

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH-GCGEEALIFFVDMERSGVK 474
           +L+D YAK   +  A  L+   + +D+  + A+M GY        EAL  F DM+   ++
Sbjct: 279 SLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFKDMQHIFME 338

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK----IEHYGCMVDLLGRAGLLD 530
            + +TF  +LN C+    ++ G+      +H L +  K    +     +VD+  ++G ++
Sbjct: 339 IDDVTFCTMLNVCADIASLSIGRQ-----IHALAIKYKPSYDVATGNALVDMYAKSGEIE 393

Query: 531 EAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +A      M    N+I W +L+     H
Sbjct: 394 DATRAFYEMK-EKNVISWTSLITGYGKH 420


>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 752

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 190/597 (31%), Positives = 336/597 (56%), Gaps = 12/597 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + SL+  Y+++N   SA +I   M K G   +  T   IL+AC+      LG++IH F I
Sbjct: 136 WTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVI 195

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G D + +V  +LI MY++ G    A  +FD M  +D+   + MI  Y R G   +A+E
Sbjct: 196 KSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIE 255

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATA 214
           V + +      P++    +++S       V+ GK +           K G     ++  A
Sbjct: 256 VFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAF------KYGFLSETSVGNA 309

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           +I MY   G    A+++F+ +++ +++SWT +ISGY R     + V  F  + +E     
Sbjct: 310 IITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINF 369

Query: 275 EITILSLIIEC-GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           + T+L+ I++C      L+LG  +H ++++ G    + +A ALVD+Y KC +++SAR +F
Sbjct: 370 DSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVF 429

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDK-AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           D + +K +  +NA+++ + ++   ++    LF  ++++ V+P+ VT   LLSL     +L
Sbjct: 430 DHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASL 489

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           E G+  H Y  K G + ++ +  +++ MYAKCG +  A+++F+    RD   WNA+++ Y
Sbjct: 490 EKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCRDSISWNALISAY 549

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
            +HG  +++L  F +M+R G  P+  T + +L AC+++GL  +G  +F+ M    G+ P 
Sbjct: 550 ALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACTYSGLWKDGICLFNLMEPKYGIKPL 609

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           +EHY CM DLLGRAG L EA ++IK  P   + ++W  L+   KLH N + G++A+  +L
Sbjct: 610 LEHYACMADLLGRAGYLSEAMDIIKRSPFPKSTLLWRTLVNVCKLHGNLNFGKLASKHLL 669

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           ++ P   G  +L+SN+YA     ++ A VR+VM +++ +KE G S +E++  VH F+
Sbjct: 670 DLSPVEAGSYILVSNMYASEKMSDEAAKVRKVMNDLKFRKEAGSSWIEIDNKVHHFV 726



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/545 (25%), Positives = 260/545 (47%), Gaps = 11/545 (2%)

Query: 20  IIKTHFKFSYTNIINPLTRYNSLVTSYIKNNK----PSSALNIYAFMRKNGSEVDNFTIP 75
           I K  F F    I  P + +    +  + NN     P   +  Y+ +    + + N   P
Sbjct: 13  ISKPQFSFPQLEIKTPNSIFTCSSSKPVHNNNNLQNPKPNVTRYSTISNEDTLLFN-DWP 71

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
            ++K         LG+ +H + +K G   D +  N ++ +Y +   L  A+ +FD M  R
Sbjct: 72  ELIKISIGSRDFLLGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTR 131

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
           + ++W+++I+GY      + A  +  +M       +E     ++   +   D  LG+ IH
Sbjct: 132 NTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIH 191

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
             V+++  DE   V + T+LI MY+K G    A+++F+ +    +     MI  Y R   
Sbjct: 192 CFVIKSGFDEN--VFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGN 249

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
             + + +F  ++ +   P++ T  ++I  C    G++ GK L     + GF    ++ NA
Sbjct: 250 GGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNA 309

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS-KVRP 374
           ++ MYG     + A  +F  M  K+++ W A+IS Y+++    KA + F+ +     +  
Sbjct: 310 IITMYGNSGMPKEAERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINF 369

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           +   +  +L  C++   LE+G  +H ++ K G   DV + TALVD+YAKC  +  A  +F
Sbjct: 370 DSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVF 429

Query: 435 SEAIYRDICMWNAMMAGY-GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
                + I  +NA++AG+    G  E+ +I F  +  +GVKP+ +TF  LL+  ++   +
Sbjct: 430 DHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASL 489

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            +G+S F       G    I     ++ +  + G +++AH+M   M  R + I W AL++
Sbjct: 490 EKGRS-FHAYTVKTGFDTNISVANSVISMYAKCGSIEDAHQMFNIMNCR-DSISWNALIS 547

Query: 554 ASKLH 558
           A  LH
Sbjct: 548 AYALH 552


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 198/559 (35%), Positives = 303/559 (54%), Gaps = 43/559 (7%)

Query: 107 YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM 166
           +  NAL+   +    L     LF  M  RD+VS++ +I G+  GG   +A+ V   +   
Sbjct: 73  FTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQA 132

Query: 167 D--IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYS 220
           D  +RPS + M +MV   + + D  LGK  H      C+  +LG      + + L+DMY+
Sbjct: 133 DSSVRPSRITMSTMVMAASALGDRALGKQFH------CQILRLGFGANAFVGSPLVDMYA 186

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE------------ 268
           K   +  AK+ F+ ++  +VV +  MI+G +RC  + E  RLF  M +            
Sbjct: 187 KMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTG 246

Query: 269 --ENVFPSEI-----------------TILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
             +N   SE                  T  S++  CG +  L+ GK +HAYI+R  ++ +
Sbjct: 247 FTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYDDN 306

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           + + +ALVDMY KCR I+ A T+F  M  K+++ W A+I  Y Q  C ++A  +F  M+ 
Sbjct: 307 VFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQR 366

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
             + P++ T+  ++S C    +LE G   H      GL   + +  ALV +Y KCG +  
Sbjct: 367 DGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIED 426

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A+RLF E  + D   W A+++GY   G  +E +  F  M   GVKP+G+TFIG+L+ACS 
Sbjct: 427 AHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSR 486

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           AG V +G+S F  M    G+VP  +HY CM+DL  R+G L EA E IK MP+ P+ I WG
Sbjct: 487 AGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWG 546

Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR 609
            LL+A +L  +  +G+ AA  +LEI+PQN    VL+ +++A   +WN+VA +RR M++ +
Sbjct: 547 TLLSACRLRGDMEIGKWAAENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQ 606

Query: 610 VKKEPGFSSVEVNGLVHKF 628
           VKKEPG S ++    VH F
Sbjct: 607 VKKEPGCSWIKYKNKVHIF 625



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 135/272 (49%), Gaps = 40/272 (14%)

Query: 10  LEQTRQCHAHIIKTHF----------------------------KFSYTNIINPLTRYNS 41
           LEQ +Q HA+II+T +                            + +  NII+    + +
Sbjct: 288 LEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIIS----WTA 343

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           L+  Y +N     A+ +++ M+++G + D++T+ +++ +CA +     G + H  A+ +G
Sbjct: 344 LIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSG 403

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
           L     VSNAL+ +Y +CGS+  A  LFDEM   D VSW+ ++ GY + G  +E +++  
Sbjct: 404 LMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFE 463

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA---TALIDM 218
           +M    ++P  V  I ++S  +    V+ G++    +    KD  + V I    T +ID+
Sbjct: 464 KMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQ---KDHGI-VPIDDHYTCMIDL 519

Query: 219 YSKCGNLAYAKQLFNRLNQN-SVVSWTVMISG 249
           YS+ G L  A++   ++  +   + W  ++S 
Sbjct: 520 YSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSA 551


>gi|242037437|ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
 gi|241919967|gb|EER93111.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
          Length = 693

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 200/593 (33%), Positives = 323/593 (54%), Gaps = 11/593 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT--HLGKEIHGF 96
           + + ++   +N +P +A  ++A M ++G   ++F     L ACA        LG+++H  
Sbjct: 76  WTTAISGCTRNGQPEAAAAMFADMLESGVAANDFACNAALAACAAAGAGALSLGEQVHSL 135

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
           A++ G   DA++ + LI++YS CGS+ +A  +F  M   DVV +++++    R G    A
Sbjct: 136 AVRAGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLARA 195

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           +EV+ +M    ++P+E  M SM++    +    +G+ IH  +++    +   V  +TALI
Sbjct: 196 VEVLCQMMRQGLQPNEHTMTSMLAECPRM----IGEQIHGYMLKVMGSQS--VYASTALI 249

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           D YS+ G+   A+ +F  L+  +VVSW  M+   IR   + + +R+F+EMI E V P+E 
Sbjct: 250 DFYSRYGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNE- 308

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
              +  I  G  G + LG+ +H   ++      + ++NAL+ MYG+   +     +   +
Sbjct: 309 --FAFSIALGACGSVCLGRQIHCSAIKCNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKI 366

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           ++ D++ W A ISA  Q    +KA  L + M      PN+      LS C +   L+ G+
Sbjct: 367 ENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQGR 426

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            LH    K G +  V    AL++MY+KCG +  A   F      D+  WN+++ G   HG
Sbjct: 427 QLHCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQHG 486

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
                L  F +M  SG +P+  TFI +L  C+HAGLV EG++ F  M    GL P   HY
Sbjct: 487 AANLVLEAFSEMCSSGWQPDDSTFIAVLVGCNHAGLVKEGETFFRLMTDRYGLTPTPSHY 546

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            CM+D+LGR G  DEA  MIK+MP  P++++W  LLA+ KLHKN  +G++A  +++E+  
Sbjct: 547 ACMIDMLGRNGRFDEALHMIKNMPFEPDVLIWKTLLASCKLHKNLDIGKLATDKLMELSE 606

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           ++    VLMSN+YA+   W D   VRR M EI VKK+ G+S +EV   V  F+
Sbjct: 607 RDSASYVLMSNLYAMHEEWQDAERVRRRMDEIGVKKDAGWSWIEVKNEVSTFV 659



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 213/450 (47%), Gaps = 31/450 (6%)

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA----- 174
           G L  A  LFD MP ++VV+W+T I G  R G PE A  +     F D+  S VA     
Sbjct: 56  GRLSDALDLFDRMPRKNVVAWTTAISGCTRNGQPEAAAAM-----FADMLESGVAANDFA 110

Query: 175 --MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYA 228
                     A    + LG+ +H+  VR       G A    I + LI++YS+CG++  A
Sbjct: 111 CNAALAACAAAGAGALSLGEQVHSLAVRA------GFAADAWIGSCLIELYSRCGSMWAA 164

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
           +++F R+    VV +T ++S   R  ++   V +  +M+ + + P+E T+ S++ EC  +
Sbjct: 165 EEVFRRMEAPDVVGYTSLVSALCRNGDLARAVEVLCQMMRQGLQPNEHTMTSMLAECPRM 224

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
               +G+ +H Y+L+     S+  + AL+D Y +  +   A T+F+ + SK+V+ W +++
Sbjct: 225 ----IGEQIHGYMLKVMGSQSVYASTALIDFYSRYGDFDMAETVFENLDSKNVVSWCSMM 280

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
               +   ++ A  +F  M    V PNE      L  C   G++ +G+ +H    K  L 
Sbjct: 281 QLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIALGAC---GSVCLGRQIHCSAIKCNLM 337

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            D+ +  AL+ MY + G V+    +  +    D+  W A ++    +G  E+A+   + M
Sbjct: 338 TDIRVSNALLSMYGRSGFVSEVEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQM 397

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
              G  PN   F   L++C+   L+ +G+ +   +   LG   K+     ++++  + G 
Sbjct: 398 HSEGFTPNDYAFSSGLSSCADLALLDQGRQLH-CLALKLGCDFKVCTGNALINMYSKCGQ 456

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +  A      M L  +++ W +L+     H
Sbjct: 457 IGSARLAFDVMNLH-DVMSWNSLIHGLAQH 485



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 195/414 (47%), Gaps = 30/414 (7%)

Query: 186 ADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           A+V LG      VV +CK            +D   K G L+ A  LF+R+ + +VV+WT 
Sbjct: 30  ANVRLGAPPPPDVVLDCKR-----------LDALMKSGRLSDALDLFDRMPRKNVVAWTT 78

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEI--TILSLIIECGFVGGLQLGKWLHAYILR 303
            ISG  R  +      +FA+M+E  V  ++               G L LG+ +H+  +R
Sbjct: 79  AISGCTRNGQPEAAAAMFADMLESGVAANDFACNAALAACAAAGAGALSLGEQVHSLAVR 138

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
            GF     + + L+++Y +C  + +A  +F  M++ DV+ + +++SA  +   + +A E+
Sbjct: 139 AGFAADAWIGSCLIELYSRCGSMWAAEEVFRRMEAPDVVGYTSLVSALCRNGDLARAVEV 198

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
              M    ++PNE TM  +L+ C       +G+ +H Y+ K      V   TAL+D Y++
Sbjct: 199 LCQMMRQGLQPNEHTMTSMLAECPRM----IGEQIHGYMLKVMGSQSVYASTALIDFYSR 254

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
            GD + A  +F     +++  W +MM      G  E+AL  F +M    V+PN   F   
Sbjct: 255 YGDFDMAETVFENLDSKNVVSWCSMMQLCIRDGRLEDALRVFSEMISEAVEPNEFAFSIA 314

Query: 484 LNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           L AC   G V  G+ +    +    L+  I     ++ + GR+G + E   ++  +   P
Sbjct: 315 LGAC---GSVCLGRQIHCSAIK-CNLMTDIRVSNALLSMYGRSGFVSEVEAVLGKIE-NP 369

Query: 544 NMIVWGALLAASKLHKNPSMGEIAATQILEIE-----PQNYGYNVLMSNIYAVA 592
           +++ W A ++A+   +N    E A   +L++      P +Y ++  +S+   +A
Sbjct: 370 DLVSWTAAISAN--FQN-GFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLA 420



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 1/149 (0%)

Query: 32  IINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           I NP L  + + +++  +N     A+ +   M   G   +++   + L +CA + +   G
Sbjct: 366 IENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLDQG 425

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           +++H  A+K G D      NALI MYS+CG + SAR  FD M   DV+SW+++I G  + 
Sbjct: 426 RQLHCLALKLGCDFKVCTGNALINMYSKCGQIGSARLAFDVMNLHDVMSWNSLIHGLAQH 485

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMV 179
           G     LE   EM     +P +   I+++
Sbjct: 486 GAANLVLEAFSEMCSSGWQPDDSTFIAVL 514


>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
 gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
          Length = 583

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 193/556 (34%), Positives = 311/556 (55%), Gaps = 6/556 (1%)

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           + +++  C++      G  +H  AIK     D  VSN ++ +Y++C  L  AR +FDEM 
Sbjct: 6   VGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMS 65

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
            R++VSWS MI GY + G P  AL +  ++   +I P+E    S++S  A +  +  GK 
Sbjct: 66  ERNLVSWSAMISGYEQIGEPISALGLFSKL---NIVPNEYVYASVISACASLKGLVQGKQ 122

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           IH   ++   D      ++ ALI MY KCG  + A   +N   + + V++  +I+G++  
Sbjct: 123 IHGQALKFGLDSV--SFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVEN 180

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
            + ++G  +   M ++  FP   T + L+  C     L+ G+ LH   ++     +  + 
Sbjct: 181 QQPDKGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIG 240

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM-KVSKV 372
           N ++ MY K   +  A   F  ++ KD++ WN  IS+ +  +  +KA E F  M    +V
Sbjct: 241 NLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRV 300

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR 432
           RP+E T    L+ C+   ++  GK +H ++ +  L  DV    AL++MYAKCG +  AY 
Sbjct: 301 RPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYY 360

Query: 433 LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL 492
           +FS+  ++++  WN M+AG+G HG G +A   F  M+  GVKP+ +TF+GLL A +HAGL
Sbjct: 361 IFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGL 420

Query: 493 VTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           V EG   F+ M    G+ P+IEH+ C++DLLGRAG L+EA E +K  P   + +V G+LL
Sbjct: 421 VDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSLL 480

Query: 553 AASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKK 612
           +A +LH +   G+  A Q+L+++P      VL+SN+YA    W+ VA   +++K   +KK
Sbjct: 481 SACRLHGDVDTGKCFARQLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKGSGLKK 540

Query: 613 EPGFSSVEVNGLVHKF 628
           EPG S +EVNG   KF
Sbjct: 541 EPGHSLIEVNGTFEKF 556



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 215/428 (50%), Gaps = 16/428 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  ++++++ Y +  +P SAL +++ +    +E   +   +++ ACA +     GK+IHG
Sbjct: 69  LVSWSAMISGYEQIGEPISALGLFSKLNIVPNE---YVYASVISACASLKGLVQGKQIHG 125

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+K GLD  ++VSNALI MY +CG    A   ++E    + V+++ +I G+     P++
Sbjct: 126 QALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPDK 185

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----I 211
             EV+R M      P     + ++       D+  G+ +H      C+  KL +     I
Sbjct: 186 GFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLH------CQTIKLKLNSTAFI 239

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-N 270
              +I MYSK   L  A++ F  + +  ++SW   IS    CN+  + +  F EM+ E  
Sbjct: 240 GNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECR 299

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           V P E T  S +  C  +  +  GK +H +++R      +   NAL++MY KC  I  A 
Sbjct: 300 VRPDEFTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAY 359

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +F  M+ ++++ WN +I+ +       KAFELF  MK   V+P+ VT VGLL+    AG
Sbjct: 360 YIFSKMEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAG 419

Query: 391 ALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY-RDICMWNAM 448
            ++ G  + ++  E  G+  ++   + L+D+  + G +N A     +  +  D  +  ++
Sbjct: 420 LVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSL 479

Query: 449 MAGYGMHG 456
           ++   +HG
Sbjct: 480 LSACRLHG 487


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 215/643 (33%), Positives = 341/643 (53%), Gaps = 61/643 (9%)

Query: 22  KTHFKFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILK- 79
           K   K S + I++  + ++N  +++Y++  +  SAL+++  MR+  +   N  I   L  
Sbjct: 45  KLESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSN 104

Query: 80  ---ACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
               CA+ +   +             D D    N ++  Y + G+L +AR LF++MP +D
Sbjct: 105 NKFDCARKVFEKMP------------DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKD 152

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           VVSW+ M+ G+ + G  EEA ++  +M    +  +E++   ++S +     ++  + +  
Sbjct: 153 VVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFD 208

Query: 197 C------VVRNC------KDEKLGVAIA-------------TALIDMYSKCGNLAYAKQL 231
                  V  NC      + ++L  A +               +I  Y++ G L+ A++L
Sbjct: 209 SKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRL 268

Query: 232 FNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL 291
           F  L    V +WT M+SG+++   ++E  R+F EM E+N    E++  ++I   G+V   
Sbjct: 269 FEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKN----EVSWNAMI--AGYVQSQ 322

Query: 292 QLGKWLHAYIL---RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
           Q+ K    +     RN   +     N +V  Y +C  I  A+ LFD M  +D + W A+I
Sbjct: 323 QIEKARELFDQMPSRNTSSW-----NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMI 377

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
           S YAQ+   ++A  LFI MK      N   +   LS C E  ALE+GK LH  + K G +
Sbjct: 378 SGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQ 437

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
              I   AL+ MY KCG +  A+ +F +   +DI  WN M+AGY  HG G+EAL  F  M
Sbjct: 438 TGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM 497

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
           + + +KP+ +T +G+L+ACSH GLV +G   F+ M    G+    +HY CM+DLLGRAG 
Sbjct: 498 KMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGR 556

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNI 588
           LDEA  ++KSMP  P+   WGALL AS++H +  +GE AA ++ E+EP N G  VL+SN+
Sbjct: 557 LDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNL 616

Query: 589 YAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           YA + RW +V  +R  M++  VKK PG+S VE+    H F  G
Sbjct: 617 YAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVG 659


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 199/598 (33%), Positives = 316/598 (52%), Gaps = 13/598 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++ +          +N +  M   G + +  +   IL AC+       G++IH   +
Sbjct: 405 WNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLIL 464

Query: 99  KNGLDG-DAYVSNALIQMYSECGSLVSARYLFDEMP--NRDVVSWSTMIRGYHRGGLPEE 155
               D  ++ V+  L+ MY +CGS+  A  +F EMP  +R +V+W+ M+  Y +    +E
Sbjct: 465 TRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKE 524

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK--LGVAIAT 213
           A   + EM    + P  ++  S++S            +  A V+R C  E       + T
Sbjct: 525 AFGALMEMLQGGVLPDALSFTSVLS--------SCYCSQEAQVLRMCILESGYRSACLET 576

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALI M+ +C  L  A+ +FN ++   VVSWT M+S      +  E   LF  M  E V P
Sbjct: 577 ALISMHGRCRELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIP 636

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
            + T+ + +  C     L LGK +HA +   G E  +A+ NAL++MY  C + R A + F
Sbjct: 637 DKFTLATTLDTCLASTTLGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFF 696

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + MK++D++ WN + +AYAQA    +A  LF  M++  V+P+++T    L++   +  + 
Sbjct: 697 ETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVS 756

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            GK  H    + GL+ DV + T LV +YAKCG ++ A  LF  A    + + NA++    
Sbjct: 757 DGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALA 816

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            HG  EEA+  F  M++ GV+P+  T + +++AC HAG+V EG S F  M    G+ P +
Sbjct: 817 QHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTL 876

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHY C VDLLGRAG L+ A ++I+ MP   N +VW +LL   KL  +  +GE  A +ILE
Sbjct: 877 EHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILE 936

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           ++P N   +V++SNIY    +W D    R+ M +  VK  PG S  E+   VH+F+ G
Sbjct: 937 LDPHNSAAHVVLSNIYCATGKWKDADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAG 994



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 149/530 (28%), Positives = 264/530 (49%), Gaps = 25/530 (4%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +L++C        GK  H      GL+   ++ N LI MY  CGSL  A  +F +M  R+
Sbjct: 31  LLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERN 90

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRF-MDIRPSEVAMISMVSLFADVADVDLGKAIH 195
           VVSW+ +I    + G    A  + R M       P+   +++M++  A+  D+ +G++IH
Sbjct: 91  VVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIH 150

Query: 196 ACVVRNCKDEKLGVA--IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           A +     +     A  +  A+I+MY+KCG+L  A  +F  + +  VVSWT M   Y + 
Sbjct: 151 AMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQE 210

Query: 254 NEI-NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
                + +R+F EM+ + + P+ IT ++ +  C     L+ G WLH+ +      F    
Sbjct: 211 RRFYPDALRIFREMLLQPLAPNVITFITALGAC---TSLRDGTWLHSLLHEASLGFDPLA 267

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSK---DVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           +NAL++MYGKC +   A ++F  M S+   D++ WNA+ISA  +A     A  +F  +++
Sbjct: 268 SNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRL 327

Query: 370 SKVRPNEVTMVGLLSLCTEAGA-LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
             +RPN VT++ +L+    +G      +  H  I + G   DV++  A++ MYAKCG  +
Sbjct: 328 EGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFS 387

Query: 429 GAYRLFSEAIYR-DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
            A+ +F    ++ D+  WN M+          + +  F  M  +G+ PN ++FI +LNAC
Sbjct: 388 AAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNAC 447

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC-----MVDLLGRAGLLDEAHEMIKSMPLR 542
           S++  +      F + +H L L  + ++        +V + G+ G + EA  + K MPL 
Sbjct: 448 SNSEALD-----FGRKIHSLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLP 502

Query: 543 P-NMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMSNIY 589
             +++ W  +L A   +        A  ++L+  + P    +  ++S+ Y
Sbjct: 503 SRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCY 552



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 160/639 (25%), Positives = 285/639 (44%), Gaps = 70/639 (10%)

Query: 22  KTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN-FTIPTILKA 80
           + H  FS     N ++ + +L+++  +    + A  ++  M    S   N +T+  +L A
Sbjct: 78  EAHAIFSKMEERNVVS-WTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNA 136

Query: 81  CAQVLMTHLGKEIHGFAIKNGLDGDA----YVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           CA      +G+ IH    + GL+  +     V NA+I MY++CGSL  A  +F  +P +D
Sbjct: 137 CANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKD 196

Query: 137 VVSWSTMIRGY--HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           VVSW+ M   Y   R   P +AL + REM    + P+ +  I+ +     + D   G  +
Sbjct: 197 VVSWTAMAGAYAQERRFYP-DALRIFREMLLQPLAPNVITFITALGACTSLRD---GTWL 252

Query: 195 HACVVRNCKDEKLGVA--IATALIDMYSKCGNLAYAKQLFNRL---NQNSVVSWTVMISG 249
           H+ +     +  LG     + ALI+MY KCG+   A  +F  +    +  +VSW  MIS 
Sbjct: 253 HSLL----HEASLGFDPLASNALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISA 308

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG--KWLHAYILRNGFE 307
            +      + + +F  +  E + P+ +T+++ I+      G+  G  +  H  I  +G+ 
Sbjct: 309 SVEAGRHGDAMAIFRRLRLEGMRPNSVTLIT-ILNALAASGVDFGAARGFHGRIWESGYL 367

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIH 366
             + + NA++ MY KC    +A  +F  ++ K DV+ WN ++ A        K    F H
Sbjct: 368 RDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHH 427

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE-VDVILKTALVDMYAKCG 425
           M ++ + PN+V+ + +L+ C+ + AL+ G+ +H+ I  +  + V+  + T LV MY KCG
Sbjct: 428 MLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVATMLVSMYGKCG 487

Query: 426 DVNGAYRLFSEAIY--RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
            ++ A  +F E     R +  WN M+  Y  +   +EA    ++M + GV P+ ++F  +
Sbjct: 488 SISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSV 547

Query: 484 L----------------------NACSHAGLVT---------EGKSVFDKMVHGLGLVPK 512
           L                      +AC    L++         + +SVF++M HG      
Sbjct: 548 LSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRCRELEQARSVFNEMDHG-----D 602

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLR---PNMIVWGALLAASKLHKNPSMGEIAAT 569
           +  +  MV          E H + + M L    P+       L          +G++   
Sbjct: 603 VVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKVIHA 662

Query: 570 QILEI--EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMK 606
            + EI  E      N L+ N+Y+    W +       MK
Sbjct: 663 CVTEIGLEADIAVENALL-NMYSNCGDWREALSFFETMK 700



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 144/286 (50%), Gaps = 16/286 (5%)

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           +L+  C     L  GK  H  I   G E  L + N L++MY +C  +  A  +F  M+ +
Sbjct: 30  ALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEER 89

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKV-SKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +V+ W A+ISA AQ     +AF LF  M + S   PN  T+V +L+ C  +  L +G+ +
Sbjct: 90  NVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSI 149

Query: 399 HTYIEKQGLE----VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           H  I + GLE       ++  A+++MYAKCG +  A  +F     +D+  W AM   Y  
Sbjct: 150 HAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVSWTAMAGAYAQ 209

Query: 455 H-GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH--GLGLVP 511
                 +AL  F +M    + PN ITFI  L AC+    + +G +    ++H   LG  P
Sbjct: 210 ERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDG-TWLHSLLHEASLGFDP 265

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP--NMIVWGALLAAS 555
              +   ++++ G+ G  + A+ + K+M  R   +++ W A+++AS
Sbjct: 266 LASN--ALINMYGKCGDWEGAYSVFKAMASRQELDLVSWNAMISAS 309



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/288 (22%), Positives = 121/288 (42%), Gaps = 16/288 (5%)

Query: 22  KTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC 81
           +    F  T     L  +N +  +Y +      A+ ++  M+  G + D  T  T L   
Sbjct: 690 REALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVS 749

Query: 82  AQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWS 141
               +   GK  H  A ++GLD D  V+  L+++Y++CG L  A  LF    +  VV  +
Sbjct: 750 GGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLN 809

Query: 142 TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN 201
            +I    + G  EEA+++  +M+   +RP    ++S++S       V+ G     C    
Sbjct: 810 AIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAGMVEEG-----CSSFL 864

Query: 202 CKDEKLGVAIA----TALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEI 256
              E  G++         +D+  + G L +A+Q+  ++  +++ + WT ++       + 
Sbjct: 865 TMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSLLGTCKLQGDA 924

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
             G R    ++E +   S   ++   I C        GKW  A + R 
Sbjct: 925 ELGERCAQRILELDPHNSAAHVVLSNIYCA------TGKWKDADVDRK 966


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 194/601 (32%), Positives = 325/601 (54%), Gaps = 10/601 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+ +Y +      +L   A  R+ G +VD F+    L AC++      G+ +H  AI
Sbjct: 77  FNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAI 136

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +GL    +VSN+L+ MYS+CG +  AR +FD    RD VSW++++ GY R G  EE + 
Sbjct: 137 LDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVR 196

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVAD--VDLGKAIHACVVRNCKDEKLGVAIATALI 216
           V   MR   +  +  A+ S++   +   D  +D+ +A+H CV++   D    V + +A+I
Sbjct: 197 VFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSD--VFLVSAMI 254

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI------NEGVRLFAEMIEEN 270
           DMY+K G L  A  LF  + + +VV +  MI+G+ R   +      +E + L++E+    
Sbjct: 255 DMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYSEVQSRG 314

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + P+E T  S++  C   G L+ GK +H  +++  F+    + +AL+D+Y     +    
Sbjct: 315 MQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGF 374

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
             F      D++ W A++S   Q    +KA  LF     + ++P+  T+  +++ C    
Sbjct: 375 RCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASLA 434

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
               G+ +  +  K G +   ++  + V MYA+ GDV+ A R F E    D+  W+A+++
Sbjct: 435 VARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVIS 494

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
            +  HGC  +AL FF +M  + V PN ITF+G+L ACSH GLV EG   ++ M    GL 
Sbjct: 495 CHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMNKDYGLS 554

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           P I+H  C+VDLLGRAG L +A   I +     + ++W +LLA+ ++H++   G++ A +
Sbjct: 555 PTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERGQLVANR 614

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIR 630
           I+E+EP +    V++ N+Y  A   +  +  R +MK+  VKKEPG S +E+   VH F+ 
Sbjct: 615 IMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVA 674

Query: 631 G 631
           G
Sbjct: 675 G 675



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 227/468 (48%), Gaps = 28/468 (5%)

Query: 107 YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM 166
           ++ N L+  Y   G  + AR L DEMP R+ VS++ +I  Y R GL   +LE +   R  
Sbjct: 44  FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103

Query: 167 DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLA 226
            +     +  + ++  +    +  G+A+HA  + +      GV ++ +L+ MYSKCG + 
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSS--GVFVSNSLVSMYSKCGEMG 161

Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
            A+++F+   +   VSW  ++SGY+R     E VR+FA M    +  +   + S+I  C 
Sbjct: 162 EARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCS 221

Query: 287 FVGG--LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
             G   + + + +H  +++ G +  + + +A++DMY K   +  A  LF  ++  +V+++
Sbjct: 222 GRGDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMF 281

Query: 345 NAVISAYAQAHCI------DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           N +I+ + +   +       +A  L+  ++   ++P E T   +L  C  AG LE GK +
Sbjct: 282 NTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQI 341

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + K   + D  + +AL+D+Y   G +   +R F  +   DI  W AM++G   +   
Sbjct: 342 HGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELH 401

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG--------KSVFDKMVHGLGLV 510
           E+AL  F +   +G+KP+  T   ++NAC+   +   G        KS FD+        
Sbjct: 402 EKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFT------ 455

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             +    C V +  R+G +D A    + M    +++ W A+++    H
Sbjct: 456 --VMGNSC-VHMYARSGDVDAATRRFQEME-SHDVVSWSAVISCHAQH 499



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 118/249 (47%), Gaps = 8/249 (3%)

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
           SL + N L+  Y +      AR L D M  ++ + +N +I AY++      + E     +
Sbjct: 42  SLFLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARAR 101

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
            + V  +  +    L+ C+ AG L  G+ +H      GL   V +  +LV MY+KCG++ 
Sbjct: 102 RAGVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMG 161

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A R+F  A  RD   WN++++GY   G  EE +  F  M R G+  N      ++  CS
Sbjct: 162 EARRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCS 221

Query: 489 HAGLVTEGKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
             G   +G     + VHG     GL   +     M+D+  + G L EA  + +S+   PN
Sbjct: 222 GRG---DGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQ-EPN 277

Query: 545 MIVWGALLA 553
           ++++  ++A
Sbjct: 278 VVMFNTMIA 286



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 111/227 (48%), Gaps = 6/227 (2%)

Query: 25  FKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV 84
           F+   ++  + +  + ++V+  ++N     AL+++      G + D FTI +++ ACA +
Sbjct: 374 FRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMNACASL 433

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
            +   G++I  FA K+G D    + N+ + MY+  G + +A   F EM + DVVSWS +I
Sbjct: 434 AVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVSWSAVI 493

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
             + + G   +AL    EM    + P+E+  + +++  +    VD G   +  +    KD
Sbjct: 494 SCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMN---KD 550

Query: 205 EKLGVAI--ATALIDMYSKCGNLAYAKQLF-NRLNQNSVVSWTVMIS 248
             L   I   T ++D+  + G LA A+    N +     V W  +++
Sbjct: 551 YGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLA 597


>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 758

 Score =  358 bits (920), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 187/578 (32%), Positives = 328/578 (56%), Gaps = 14/578 (2%)

Query: 72  FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE 131
           F +P +L+ C         + +HG  +K G   + +V + L+ +Y++CG++  AR +FD 
Sbjct: 69  FYVP-LLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDN 127

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           M  R+VV+W+T++ G+ +   P+ A+ V +EM +    PS   + +++   + +  + LG
Sbjct: 128 MLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLG 187

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
              HA +++   D     ++ +AL  +YSKCG L  A + F+R+ + +V+SWT  +S   
Sbjct: 188 DQFHAYIIKYHVD--FDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACA 245

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
                 +G+RLF EMI  ++ P+E T+ S + +C  +  L+LG  +++  ++ G+E +L 
Sbjct: 246 DNGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLR 305

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ-----------AHCIDKA 360
           + N+L+ +Y K   I  A  LF+ M    ++ WNA+I+ +AQ            H   +A
Sbjct: 306 VRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEA 365

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
            +LF  + +S ++P+  T+  +LS+C+   A+E G+ +H    K G   DVI+ T+L+ M
Sbjct: 366 LKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISM 425

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           Y+KCG +  A + F E   R +  W +M+ G+  HG  ++AL  F DM  +GV+PN +TF
Sbjct: 426 YSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTF 485

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
           +G+L+ACSHAG+V++  + F+ M     + P ++HY CMVD+  R G L++A   IK M 
Sbjct: 486 VGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMN 545

Query: 541 LRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAG 600
             P+  +W   +A  K H N  +G  AA Q+L ++P++    VL+ N+Y  A R+ DV+ 
Sbjct: 546 YEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDVSR 605

Query: 601 VRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           VR++M+E +V K   +S + +   V+ F   G  + +S
Sbjct: 606 VRKMMEEEKVGKLKDWSWISIKDKVYSFKTNGKTHPQS 643



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/461 (26%), Positives = 241/461 (52%), Gaps = 18/461 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+  +++N++P  A++++  M   GS    +T+  +L AC+ +    LG + H + I
Sbjct: 136 WTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGDQFHAYII 195

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K  +D DA V +AL  +YS+CG L  A   F  +  ++V+SW++ +      G P + L 
Sbjct: 196 KYHVDFDASVGSALCSLYSKCGRLEDALKTFSRIREKNVISWTSAVSACADNGAPVKGLR 255

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  EM  +DI+P+E  + S +S   ++  ++LG  +++  ++   +  L V    +L+ +
Sbjct: 256 LFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRV--RNSLLYL 313

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR-----------CNEINEGVRLFAEMI 267
           Y K G +  A +LFNR++  S+V+W  MI+G+ +           C+  +E ++LF+++ 
Sbjct: 314 YLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLN 373

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
              + P   T+ S++  C  +  ++ G+ +HA  ++ GF   + ++ +L+ MY KC  I 
Sbjct: 374 LSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIE 433

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            A   F  M ++ ++ W ++I+ ++Q     +A  +F  M ++ VRPN VT VG+LS C+
Sbjct: 434 RASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAVTFVGVLSACS 493

Query: 388 EAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI-CMW 445
            AG +     +     +K  ++  +     +VDM+ + G +  A     +  Y     +W
Sbjct: 494 HAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIW 553

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKP-NGITFIGLLN 485
           +  +AG   HG  E  L F+   +   +KP +  T++ LLN
Sbjct: 554 SNFIAGCKSHGNLE--LGFYAAEQLLSLKPKDPETYVLLLN 592


>gi|78499697|gb|ABB45851.1| hypothetical protein [Eutrema halophilum]
          Length = 697

 Score =  358 bits (919), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 200/603 (33%), Positives = 318/603 (52%), Gaps = 5/603 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKN--GSEVDNFTIPTILKACAQVLMTHLGKEIHGF 96
           + +++  Y+   KP  AL +++ MR +  G   D + +   LKAC Q      G+ +H +
Sbjct: 62  WTAIMKGYVAATKPEEALILFSAMRVDPLGVSGDTYVLSVALKACGQSSNIAYGESLHAY 121

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
           A K  L    +V +AL+ MY   G +  +  +F EMP R+ V+W+  I G    GL  E 
Sbjct: 122 AEKTFLLSSVFVGSALLDMYMRIGKIDKSCRVFAEMPFRNSVTWTAFITGLVHAGLHYEG 181

Query: 157 LEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           L    +M RF  +     A    +   AD+  V  G+ IH  V+   K     + +A +L
Sbjct: 182 LRYFSQMSRFKQLSSDTFAFAIALKACADLRQVKYGREIHTHVI--VKGFAAILWVANSL 239

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
             MY++CG +    +LF  +++  VV WT +I+ YIR  +  + V  F  M    V P+E
Sbjct: 240 ATMYTECGEMQDGLRLFESMSERDVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNE 299

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T  S    C  +  L  G+ LH  +   G   SL+++N+++ MY  C ++ SA  LF G
Sbjct: 300 QTFASTFAACASLSRLVWGEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQG 359

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M+ +D++ W+ +I  Y+QA   ++ F+ F  M+ +  +P +  +  LLS+      LE G
Sbjct: 360 MRCRDIISWSTIIGGYSQAAFGEECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQG 419

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H      GLE +  +++AL++MY+KCG +  A ++F E    DI    AM+ GY  H
Sbjct: 420 RQVHALALYLGLEQNPTIRSALINMYSKCGSIIEASKVFEEKDRTDIVSLTAMINGYAEH 479

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  EEA+  F    +   +P+ +TFI +L ACSH+G +  G   F+ M     + P  EH
Sbjct: 480 GKCEEAIDLFEKSLKLSFRPDDVTFISVLTACSHSGQLDLGFQYFNLMQENYNMRPAKEH 539

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           YGCMVDLL RAG L++A +MI  MP + + +VW  LL A K   +   G  AA +ILE++
Sbjct: 540 YGCMVDLLCRAGRLNDAEKMINEMPWKKDDVVWTTLLRACKEKGDVERGRRAAQRILELD 599

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
           P ++   V ++NI++    W + A VR+ MK   V KEPG+SS+ +   V  F  G + +
Sbjct: 600 PTSFTTLVTLANIHSSTGNWKEAANVRKDMKSKGVIKEPGWSSILIKDQVSAFASGSLSH 659

Query: 636 WKS 638
            +S
Sbjct: 660 PQS 662



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 224/448 (50%), Gaps = 14/448 (3%)

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
           +I+  +  +   +++ +Q   + G L  AR +FD+MP RD+ SW+ +++GY     PEEA
Sbjct: 19  SIEKSMHSNHVDTHSQLQDLIDSGKLRVARQVFDKMPRRDIKSWTAIMKGYVAATKPEEA 78

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFA--DVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           L +   MR   +  S    +  V+L A    +++  G+++HA   +        V + +A
Sbjct: 79  LILFSAMRVDPLGVSGDTYVLSVALKACGQSSNIAYGESLHAYAEKTFLLS--SVFVGSA 136

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+DMY + G +  + ++F  +   + V+WT  I+G +      EG+R F++M       S
Sbjct: 137 LLDMYMRIGKIDKSCRVFAEMPFRNSVTWTAFITGLVHAGLHYEGLRYFSQMSRFKQLSS 196

Query: 275 EITILSLIIE-CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +    ++ ++ C  +  ++ G+ +H +++  GF   L +AN+L  MY +C E++    LF
Sbjct: 197 DTFAFAIALKACADLRQVKYGREIHTHVIVKGFAAILWVANSLATMYTECGEMQDGLRLF 256

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + M  +DV++W ++I+AY +    +KA   F+ M+ S+V PNE T     + C     L 
Sbjct: 257 ESMSERDVVLWTSLITAYIRIGQEEKAVNTFLLMRNSQVSPNEQTFASTFAACASLSRLV 316

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            G+ LH  +   GL   + +  +++ MY+ C  ++ A  LF     RDI  W+ ++ GY 
Sbjct: 317 WGEQLHGNVFSLGLGDSLSVSNSMMKMYSTCAKLDSASVLFQGMRCRDIISWSTIIGGYS 376

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
               GEE   +F  M ++G +P       LL+      ++ +G+      VH L L   +
Sbjct: 377 QAAFGEECFKYFSWMRQAGPQPTDFALASLLSVSGIMAVLEQGRQ-----VHALALYLGL 431

Query: 514 EH----YGCMVDLLGRAGLLDEAHEMIK 537
           E        ++++  + G + EA ++ +
Sbjct: 432 EQNPTIRSALINMYSKCGSIIEASKVFE 459


>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 725

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 180/532 (33%), Positives = 299/532 (56%), Gaps = 37/532 (6%)

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           P  + + +++++R   R G P   +   + +R +  R   ++   ++   + V+ +  G 
Sbjct: 75  PLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGM 134

Query: 193 AIH--ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
            +H  A  +    D      + T L+DMY+ CG + YA+ +F+ ++Q  VV+W  MI  Y
Sbjct: 135 ELHGFAFKIATLSDP----FVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERY 190

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
            R   ++E  +LF EM + NV P E+ + +++  CG  G ++  + ++ +++ N      
Sbjct: 191 CRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDT 250

Query: 311 AMANALVDMYG-------------------------------KCREIRSARTLFDGMKSK 339
            +  ALV MY                                K   +  AR +FD  + K
Sbjct: 251 HLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMK 310

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           D++ W  +ISAYA++    +A  +F  M  S ++P+ VTM+ ++S C   G L+  KW+H
Sbjct: 311 DLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVH 370

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
            Y    GLE  + +  AL++MYAKCG ++ A  +F +   R++  W++M+  + MHG   
Sbjct: 371 RYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEAS 430

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           ++L  F  M++  V+PN +TF+G+L  CSH+GLV EGK +F  M     + PKIEHYGCM
Sbjct: 431 DSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCM 490

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNY 579
           VDL GRA LL EA E+I+SMP+ PN+++WG+L++A ++H    +GE+AA +IL++EP + 
Sbjct: 491 VDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHD 550

Query: 580 GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           G  VLMSNIYA   RW+ V  +R +M++ +V KE G S +++NG  H+F+ G
Sbjct: 551 GALVLMSNIYAREYRWDYVRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIG 602



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 150/504 (29%), Positives = 253/504 (50%), Gaps = 56/504 (11%)

Query: 9   NLEQTRQCHAHIIKT----------------------HFKFSYTNIINPLTR---YNSLV 43
           +L   +Q HAHI++T                       +  +  + I+PL     +NSL+
Sbjct: 27  SLNHIKQLHAHILRTVINHKLNSFLFNLSFSSSSINLSYALNLFSSISPLPESIVFNSLL 86

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD 103
               ++ +P + +  Y  +R  G   D  + P ILKA ++V     G E+HGFA K    
Sbjct: 87  RDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAFKIATL 146

Query: 104 GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
            D +V   L+ MY+ CG +  AR +FDEM  RDVV+W+TMI  Y R GL +EA ++  EM
Sbjct: 147 SDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEM 206

Query: 164 RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--------------------CK 203
           +  ++ P E+ + ++VS      ++   +AI+  ++ N                    C 
Sbjct: 207 KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCM 266

Query: 204 D------EKLGVA---IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
           D       K+ V    ++TA++  YSK G L  A+ +F++     +V WT MIS Y   +
Sbjct: 267 DMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESD 326

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
              E +R+F EM    + P  +T+LS+I  C  +G L   KW+H Y   NG E  L + N
Sbjct: 327 HPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDN 386

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
           AL++MY KC  + +AR +F+ M +++V+ W+++I+A+A       +  LF  MK   V P
Sbjct: 387 ALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEP 446

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLH-TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           NEVT VG+L  C+ +G +E GK +  +  ++  +   +     +VD++ +   +  A  +
Sbjct: 447 NEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEV 506

Query: 434 F-SEAIYRDICMWNAMMAGYGMHG 456
             S  +  ++ +W ++M+   +HG
Sbjct: 507 IESMPMAPNVVIWGSLMSACRVHG 530


>gi|413932452|gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 719

 Score =  358 bits (919), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 201/600 (33%), Positives = 326/600 (54%), Gaps = 9/600 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + + ++   +N +P +A  ++A M ++G   ++F     L ACA      LG+++H  A+
Sbjct: 104 WTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNAALAACAAAGALGLGEQVHSLAV 163

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G   DA++ + LI++YS CGSL +A  +F  M   DVV +++++    R G    A++
Sbjct: 164 RAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVD 223

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V+ +M    ++P+E  M SM++         +G+ IH  +++    +   V  +TALID 
Sbjct: 224 VLCQMTRQGLQPNEHTMTSMLA----ECPRGIGEQIHGYMLKVMGSQS--VYASTALIDF 277

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YS+ G+   AK +F  L   +VVSW  M+   IR   +++ +R+F+EMI E V P+E   
Sbjct: 278 YSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAF 337

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
              +  CG V    LG+ +H   ++      + ++NAL+ MYG+   +     +   +++
Sbjct: 338 SIALSACGSVC---LGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIEN 394

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D++ W A ISA  Q    +KA  L + M      PN+      LS C +   L  G+ L
Sbjct: 395 PDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQL 454

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    K G +  V    AL++MY+KCG +  A   F      D+  WN+++ G   HG  
Sbjct: 455 HCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDA 514

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
             AL  F +M  S  +P+  TF+ +L  C+HAGLV EG++ F +M    GL P   HY C
Sbjct: 515 NLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYAC 574

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           M+D+LGR G   EA  MI++MP  P++++W  LLA+ KLH+N  +G++AA +++E+  ++
Sbjct: 575 MIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSERD 634

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
               VLMSN+YA+   W D   VRR M EI VKK+ G+S +EV   V+ F+ G M +  S
Sbjct: 635 SASYVLMSNLYAMHEEWRDAERVRRRMDEIGVKKDAGWSWIEVKNEVNTFVAGDMSHPDS 694



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 198/384 (51%), Gaps = 17/384 (4%)

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV 179
           G L  A  LFD MP ++VV+W+T I G  R G PE A  +  +M    + P++ A  + +
Sbjct: 84  GRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNAAL 143

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRL 235
           +  A    + LG+ +H+  VR       G A    I + LI++YS+CG+L  A+++F R+
Sbjct: 144 AACAAAGALGLGEQVHSLAVR------AGFAADAWIGSCLIELYSRCGSLRAAEEVFRRM 197

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
               VV +T ++S   R  E+   V +  +M  + + P+E T+ S++ EC       +G+
Sbjct: 198 EAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAEC----PRGIGE 253

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
            +H Y+L+     S+  + AL+D Y +  +  +A+T+F+ ++SK+V+ W +++    +  
Sbjct: 254 QIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDG 313

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
            +D A  +F  M    V+PNE      LS C   G++ +G+ +H    K+ L  D+ +  
Sbjct: 314 RLDDALRVFSEMISEGVQPNEFAFSIALSAC---GSVCLGRQIHCSAIKRDLMTDIRVSN 370

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           AL+ MY + G V+    +  +    D+  W A ++    +G  E+A+   + M   G  P
Sbjct: 371 ALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTP 430

Query: 476 NGITFIGLLNACSHAGLVTEGKSV 499
           N   F   L++C+   L+ +G+ +
Sbjct: 431 NDYAFSSGLSSCADLALLHQGRQL 454



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 189/382 (49%), Gaps = 17/382 (4%)

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +D   K G L  A  LF+R+ + +VV+WT  ISG  R         +FA+M+E  V P++
Sbjct: 77  LDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPND 136

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
               + +  C   G L LG+ +H+  +R GF     + + L+++Y +C  +R+A  +F  
Sbjct: 137 FACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRR 196

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M++ DV+ + +++SA  +   + +A ++   M    ++PNE TM  +L+ C       +G
Sbjct: 197 MEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECPRG----IG 252

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H Y+ K      V   TAL+D Y++ GD   A  +F     +++  W +MM      
Sbjct: 253 EQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRD 312

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  ++AL  F +M   GV+PN   F   L+AC   G V  G+ +    +    L+  I  
Sbjct: 313 GRLDDALRVFSEMISEGVQPNEFAFSIALSAC---GSVCLGRQIHCSAIK-RDLMTDIRV 368

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
              ++ + GR+G + E   ++  +   P+++ W A ++A+   +N    E A   +L++ 
Sbjct: 369 SNALLSMYGRSGFVSELEAVLGKIE-NPDLVSWTAAISAN--FQN-GFSEKAVALLLQMH 424

Query: 576 -----PQNYGYNVLMSNIYAVA 592
                P +Y ++  +S+   +A
Sbjct: 425 SEGFTPNDYAFSSGLSSCADLA 446



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 1/149 (0%)

Query: 32  IINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           I NP L  + + +++  +N     A+ +   M   G   +++   + L +CA + + H G
Sbjct: 392 IENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQG 451

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           +++H  A+K G D      NALI MYS+CG + SAR  FD M   DV+SW+++I G  + 
Sbjct: 452 RQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQH 511

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMV 179
           G    ALE   EM   D RP +   +S++
Sbjct: 512 GDANLALETFSEMCSSDWRPDDSTFLSVL 540



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 2/145 (1%)

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           DV+L    +D   K G +  A  LF     +++  W   ++G   +G  E A   F DM 
Sbjct: 69  DVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADML 128

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
            SGV PN       L AC+ AG +  G+ V    V   G         C+++L  R G L
Sbjct: 129 ESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRA-GFAADAWIGSCLIELYSRCGSL 187

Query: 530 DEAHEMIKSMPLRPNMIVWGALLAA 554
             A E+ + M   P+++ + +L++A
Sbjct: 188 RAAEEVFRRMEA-PDVVGYTSLVSA 211


>gi|297835788|ref|XP_002885776.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331616|gb|EFH62035.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 582

 Score =  358 bits (918), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 198/570 (34%), Positives = 321/570 (56%), Gaps = 9/570 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+  Y +N   S A  ++  M + G      T+  +L  C Q      G+ +HG A 
Sbjct: 9   WNALICGYSRNGYESDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGIAA 68

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+GL+ D+ V NALI  YS+C  L SA  LF EM ++  VSW+TMI  Y + GL EEA+ 
Sbjct: 69  KSGLEMDSQVKNALISFYSKCAELDSAEVLFREMKDKSTVSWNTMIGAYSQSGLMEEAIT 128

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V + M    +  S V +I+++S  A V+     + +H  VV++       +++ T+L+  
Sbjct: 129 VFKNMFEKSVEISPVTIINLLS--AHVSH----EPLHCLVVKSGMVND--ISVVTSLVCA 180

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YS+CG L  A++L+   NQ+S+V  T ++S Y    +++  V  F++M +  +    + +
Sbjct: 181 YSRCGYLDSAERLYASANQDSIVGLTSIVSSYAEKGDMDIAVVYFSKMRQLCMKIDAVAL 240

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           + ++  C     + +G  LH Y +++G      + N L+ MY K  ++ +   LF  ++ 
Sbjct: 241 VGILHGCKNSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITMYSKFDDVETVLFLFQQLQE 300

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMGKW 397
             ++ WN+VIS   Q+     AFE+F  MK+S  + P+ +T+  LL+ C++   L +GK 
Sbjct: 301 TPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCSQLCCLNLGKE 360

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH Y  +   E +  + TAL+DMYAKCG+   A  +F          WN+M++GY + G 
Sbjct: 361 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 420

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
              AL  +++M   G+KP+ ITF+G+L+AC+H G V EGK  F  M+   G+ P ++HY 
Sbjct: 421 QNRALSCYLEMREKGLKPDKITFLGVLSACTHGGFVDEGKIYFRAMIKEFGISPCLQHYA 480

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
            MV LLGRA L  EA  +I  M ++P+  VWGALL+A  +H+   +GE  A ++  ++ +
Sbjct: 481 LMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYIAKKMFMLDYK 540

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
           N G  VLMSN+YA    W+DV  VR++MK+
Sbjct: 541 NGGLYVLMSNLYATEAMWDDVVRVRKMMKD 570



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 201/431 (46%), Gaps = 19/431 (4%)

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           MP RD V W+ +I GY R G   +A ++   M      PS   +++++        V  G
Sbjct: 1   MPERDTVVWNALICGYSRNGYESDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           +++H    ++    ++   +  ALI  YSKC  L  A+ LF  +   S VSW  MI  Y 
Sbjct: 61  RSVHGIAAKS--GLEMDSQVKNALISFYSKCAELDSAEVLFREMKDKSTVSWNTMIGAYS 118

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +   + E + +F  M E++V  S +TI++L+            + LH  ++++G    ++
Sbjct: 119 QSGLMEEAITVFKNMFEKSVEISPVTIINLL------SAHVSHEPLHCLVVKSGMVNDIS 172

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           +  +LV  Y +C  + SA  L+       ++   +++S+YA+   +D A   F  M+   
Sbjct: 173 VVTSLVCAYSRCGYLDSAERLYASANQDSIVGLTSIVSSYAEKGDMDIAVVYFSKMRQLC 232

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           ++ + V +VG+L  C  +  +++G  LH Y  K GL    ++   L+ MY+K  DV    
Sbjct: 233 MKIDAVALVGILHGCKNSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITMYSKFDDVETVL 292

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS-GVKPNGITFIGLLNACSHA 490
            LF +     +  WN++++G    G    A   F  M+ S G+ P+ IT   LL  CS  
Sbjct: 293 FLFQQLQETPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCSQL 352

Query: 491 GLVTEGKSVFDKMVHGLGLVPKI--EHYGC--MVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
             +  GK      +HG  L      E++ C  ++D+  + G   +A  + KS+   P   
Sbjct: 353 CCLNLGKE-----LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTA 406

Query: 547 VWGALLAASKL 557
            W ++++   L
Sbjct: 407 TWNSMISGYSL 417



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 91/160 (56%), Gaps = 1/160 (0%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTHLGKE 92
            PL  +NS+++  +++ + S+A  ++  M+ +G  + D  TI ++L  C+Q+   +LGKE
Sbjct: 301 TPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCSQLCCLNLGKE 360

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HG+ ++N  + + +V  ALI MY++CG+ V A  +F  +      +W++MI GY   GL
Sbjct: 361 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 420

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
              AL    EMR   ++P ++  + ++S       VD GK
Sbjct: 421 QNRALSCYLEMREKGLKPDKITFLGVLSACTHGGFVDEGK 460


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  358 bits (918), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 199/516 (38%), Positives = 308/516 (59%), Gaps = 16/516 (3%)

Query: 128 LFDEMPNR-DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
           LF+   ++ DV SW+++I    R G   EAL     MR + + P+  +    +   + + 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90

Query: 187 DVDLGKAIH--ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
           D+  GK  H  A V     D    + +++ALI MYS CG L  A+++F+ + + ++VSWT
Sbjct: 91  DIFSGKQTHQQAFVFGYQSD----IFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWT 146

Query: 245 VMISGYIRCNEINEGVRLFAEM-IEEN-----VFPSEITILSLIIECGFVGGLQLGKWLH 298
            MI GY       + V LF ++ IEEN     +F   + ++S+I  C  V    L + +H
Sbjct: 147 SMIRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIH 206

Query: 299 AYILRNGFEFSLAMANALVDMYGKCRE--IRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           +++++ GF+  +++ N L+D Y K  E  +  AR +FD +  KD + +N+++S YAQ+  
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266

Query: 357 IDKAFELFIHMKVSKVRP-NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
            ++AF++F  +   KV   N +T+  +L   + +GAL +GK +H  + + GLE DVI+ T
Sbjct: 267 SNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           +++DMY KCG V  A   F     +++  W AM+AGYGMHG   +AL  F  M  SGV+P
Sbjct: 327 SIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEM 535
           N ITF+ +L ACSHAGL   G   F+ M    G+ P +EHYGCMVDLLGRAG L +A+++
Sbjct: 387 NYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446

Query: 536 IKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRW 595
           I+ M + P+ I+W +LLAA ++HKN  + EI+  ++ E++P N GY +L+S+IYA + RW
Sbjct: 447 IQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRW 506

Query: 596 NDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            DV  VR  MK   + K PGFS +E+NG VH F+ G
Sbjct: 507 KDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIG 542



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 136/432 (31%), Positives = 235/432 (54%), Gaps = 21/432 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++    ++   + AL  ++ MRK        + P  +KAC+ +L    GK+ H  A 
Sbjct: 44  WNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAF 103

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G   D +VS+ALI MYS CG L  AR +FDE+P R++VSW++MIRGY   G   +A+ 
Sbjct: 104 VFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVS 163

Query: 159 VMREM----------RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           + +++           F+D     + M+S++S  + VA   L ++IH+ V++   D   G
Sbjct: 164 LFKDLLIEENDDDATMFLD----SMGMVSVISACSRVAAKGLTESIHSFVIKRGFDR--G 217

Query: 209 VAIATALIDMYSKCGN--LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
           V++   L+D Y+K G   +A A+++F+++     VS+  ++S Y +    NE   +F  +
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRL 277

Query: 267 IEENVFPSE-ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           I+E V     IT+ ++++     G L++GK +H  ++R G E  + +  +++DMY KC  
Sbjct: 278 IKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGR 337

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           + +AR  FD MK+K+V  W A+I+ Y       KA ELF  M  S VRPN +T V +L+ 
Sbjct: 338 VETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAA 397

Query: 386 CTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDIC 443
           C+ AG  ++G  W +    + G+E  +     +VD+  + G +  AY L  +  +  D  
Sbjct: 398 CSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQKMKMEPDSI 457

Query: 444 MWNAMMAGYGMH 455
           +W++++A   +H
Sbjct: 458 IWSSLLAACRIH 469


>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 678

 Score =  358 bits (918), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 191/505 (37%), Positives = 287/505 (56%), Gaps = 3/505 (0%)

Query: 128 LFDEMP-NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
           +F + P N +   ++TMIRG         A+ +   M    I P       ++   A + 
Sbjct: 59  VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
              LG  IH+ V +   D    V + T ++  YSKCG L  A ++F+ +   +VVSWT M
Sbjct: 119 LFHLGVMIHSLVFKTGFD--CDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGM 176

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           I G I   +  E V LF  ++E  + P    I+ ++  C  +G L+ G+W+   +   G 
Sbjct: 177 ICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGL 236

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
             ++ +A +LVDMY KC  +  AR +FDGM  KD++ W+A+I  YA      +A ELF  
Sbjct: 237 SRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFE 296

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           M+   VRP+   MVG LS C   GALE+G W    +  +    + +L T+L+D YAKCG 
Sbjct: 297 MRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGS 356

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           +  A  ++     +D  ++NA+++G  M+G    A   F  M + G+ PN  TF+GLL  
Sbjct: 357 MEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCG 416

Query: 487 CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
           C+HAGLV +G+  F+ M H   + P IEHYGCMVDLL RAG LDEAH +IK MP++ N+I
Sbjct: 417 CTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVI 476

Query: 547 VWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMK 606
           VWG+LL   +LH+   + E    Q++E+EP N G+ VL+SNIY+ + RW++   +R  + 
Sbjct: 477 VWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVN 536

Query: 607 EIRVKKEPGFSSVEVNGLVHKFIRG 631
           E  ++K PG+S VEV+G+VH+F+ G
Sbjct: 537 EKGMQKLPGYSWVEVDGVVHEFLVG 561



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 225/419 (53%), Gaps = 4/419 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+++   +  ++ ++A+++YA M K     D+FT   +LKACA++ + HLG  IH    
Sbjct: 72  YNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVF 131

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G D D +V   ++  YS+CG L  A  +FD+M  ++VVSW+ MI G    G   EA++
Sbjct: 132 KTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVD 191

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R +    +RP    ++ ++   A + D++ G+ I  C +R C   +  V +AT+L+DM
Sbjct: 192 LFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRC-MRECGLSR-NVFVATSLVDM 249

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG++  A+ +F+ + +  +V W+ MI GY       E + LF EM + NV P    +
Sbjct: 250 YTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAM 309

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +  +  C  +G L+LG W    +    F  +  +  +L+D Y KC  +  A  ++  MK 
Sbjct: 310 VGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKE 369

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-W 397
           KD +++NAVIS  A    +  AF +F  M    + PNE T VGLL  CT AG ++ G+ +
Sbjct: 370 KDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHY 429

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
            ++      +   +     +VD+ A+ G ++ A+ L     +  ++ +W +++ G  +H
Sbjct: 430 FNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLH 488



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 167/322 (51%), Gaps = 10/322 (3%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           ++  +  +  ++   I+  K   A++++  + ++G   D F I  +L+ACA++     G+
Sbjct: 166 VVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGR 225

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            I     + GL  + +V+ +L+ MY++CGS+  AR++FD M  +D+V WS MI+GY   G
Sbjct: 226 WIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNG 285

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
           LP EA+E+  EMR +++RP   AM+  +S  A +  ++LG       + N ++      +
Sbjct: 286 LPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKG--LMNYEEFLSNPVL 343

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
            T+LID Y+KCG++  A  ++  + +   V +  +ISG     ++     +F +M +  +
Sbjct: 344 GTSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGI 403

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA----NALVDMYGKCREIR 327
            P+E T + L+  C   G +  G+    Y      +FS+         +VD+  +   + 
Sbjct: 404 PPNEHTFVGLLCGCTHAGLVDDGR---HYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLD 460

Query: 328 SARTLFDGMKSK-DVMIWNAVI 348
            A  L  GM  K +V++W +++
Sbjct: 461 EAHNLIKGMPMKANVIVWGSLL 482


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  357 bits (917), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 207/564 (36%), Positives = 312/564 (55%), Gaps = 12/564 (2%)

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDG-DAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           L++C +     LG+ +H   + +G      +++N LI MYS C  + SA  LFD MP  +
Sbjct: 24  LQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSHCADVPSAVRLFDAMPRPN 83

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           +VSW+T++ G  +  +  +AL     M    + P++ A+ S     A +A    G  +H 
Sbjct: 84  LVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHC 143

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
             VR   D +L VA  + L DMYSK G L  A ++F+++ Q   V+WT MI GY +   +
Sbjct: 144 VGVRLGFDAELFVA--SNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNL 201

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ---LGKWLHAYILRNGFEFSLAMA 313
              V  F +M  E +  ++  +L  ++     GGL+   L + +H+ ++++GFE  +A+ 
Sbjct: 202 EAAVIAFRDMRREGLVGADQHVLCSVLSAS--GGLKDGWLARAIHSCVMKSGFEQEVAVR 259

Query: 314 NALVDMYGKCREI-RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
           NAL DMY K  ++  +AR +     S +V+   ++I  Y +  CI+KA  +FI ++   V
Sbjct: 260 NALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGV 319

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR 432
            PNE T   ++  C     LE G  LH  + K  L  D  + + L+DMY KCG ++ + +
Sbjct: 320 EPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQ 379

Query: 433 LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL 492
           LF E  Y     WNA +     HG G EA+  F  M  SG++PN ITF+ LL ACSHAGL
Sbjct: 380 LFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGL 439

Query: 493 VTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           V EG   F  M    G+ PK EHY C++D+ GRAG LDEA + I  MP++PN   W +LL
Sbjct: 440 VDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLL 499

Query: 553 AASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKK 612
            A ++  N  +GEIAA  ++++EP N G +V +S IYA   +W DV  VR++M++ R+KK
Sbjct: 500 GACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRDNRIKK 559

Query: 613 EPGFSSVEVNGLVHKFIRGGMVNW 636
            PGFS V+ N   H F   G  +W
Sbjct: 560 LPGFSWVDSNKKTHVF---GSEDW 580



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 227/429 (52%), Gaps = 8/429 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + +LV+   +N+    AL  ++ M + G     F + +  +A A +   H G ++H 
Sbjct: 84  LVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAGAQLHC 143

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             ++ G D + +V++ L  MYS+ G LV A  +FD+MP +D V+W+ MI GY + G  E 
Sbjct: 144 VGVRLGFDAELFVASNLADMYSKSGLLVEACRVFDQMPQKDAVAWTAMIDGYAKNGNLEA 203

Query: 156 ALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           A+   R+MR    +   +  + S++S    + D  L +AIH+CV+++  +++  VA+  A
Sbjct: 204 AVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQE--VAVRNA 261

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNS--VVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           L DMY+K  ++  A ++  +++Q S  VVS T +I GYI  + I + + +F E+  + V 
Sbjct: 262 LTDMYAKAADMDNAARVV-KIDQGSLNVVSATSLIDGYIETDCIEKALLMFIELRRQGVE 320

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P+E T  S+I  C     L+ G  LHA +++        +++ L+DMYGKC  I  +  L
Sbjct: 321 PNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLISLSIQL 380

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F  ++    + WNA I+  AQ     +A   F  M  S +RPN +T V LL+ C+ AG +
Sbjct: 381 FKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTACSHAGLV 440

Query: 393 EMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMA 450
           + G K+ ++  +  G+E      + ++DMY + G ++ A +   E  +  +   W +++ 
Sbjct: 441 DEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYGWCSLLG 500

Query: 451 GYGMHGCGE 459
              M G  E
Sbjct: 501 ACRMRGNKE 509


>gi|115459098|ref|NP_001053149.1| Os04g0488200 [Oryza sativa Japonica Group]
 gi|38344239|emb|CAD41332.2| OJ991113_30.16 [Oryza sativa Japonica Group]
 gi|113564720|dbj|BAF15063.1| Os04g0488200 [Oryza sativa Japonica Group]
 gi|125548801|gb|EAY94623.1| hypothetical protein OsI_16400 [Oryza sativa Indica Group]
          Length = 598

 Score =  357 bits (917), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 174/423 (41%), Positives = 265/423 (62%), Gaps = 3/423 (0%)

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V +  AL+  Y  CG    A+++F+ + +  VVSWT ++S + R     E + + AEM  
Sbjct: 153 VPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRGGMFMEALGVLAEM-- 210

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
            +V P+E+T+ S+++ CG +G  + GK +H +  R   E +L + NAL+DMY KC ++  
Sbjct: 211 -DVTPNEVTLASVLVACGNLGTARAGKAVHGWYFRREKELNLIVGNALLDMYVKCEKLDL 269

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           AR +FD + ++D++ W  +IS   Q     +A E+F  M++S V+P++V +  +LS C  
Sbjct: 270 ARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACAS 329

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
            GALE G+W+H YIE++G+E DV + T++VDMY KCG ++ A  +F E   +++  WNA+
Sbjct: 330 LGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSWNAL 389

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           + G+ +HG G EAL  F  M  SG+ PN +TFI +L AC H+GLV EG+ +F+ M     
Sbjct: 390 INGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYK 449

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
           L P  +HYGCMVDLLGRAGL+ EA+++IK+MP+RP +  W  LL+A + H      +   
Sbjct: 450 LSPWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLSACQAHGRMDFSQQIL 509

Query: 569 TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
             I E+E    G  VL+SN+YAV++RW DV   R  M E  ++KEPG S +EVNG   +F
Sbjct: 510 MHIHELESSGNGIYVLLSNMYAVSDRWADVGKARGFMNEKGMQKEPGSSVIEVNGKTCEF 569

Query: 629 IRG 631
           + G
Sbjct: 570 LVG 572



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 146/451 (32%), Positives = 239/451 (52%), Gaps = 19/451 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFM-----RKNGSEVDNFTIPTILKACAQVLM-THLGKE 92
           +N+L++S      PS+A   +A +        G+  D +T+P  LKACA++      G +
Sbjct: 80  FNALISSLTHAGDPSAAFRAFALLLVASGAGAGARPDGYTLPAALKACARLGGGLREGCQ 139

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
            H  A K G  G   V NAL+  Y  CG    AR +FDEM  RDVVSW+ ++  + RGG+
Sbjct: 140 AHAVAEKAGFLGRVPVQNALVTFYGACGQCGDARKVFDEMAERDVVSWTALLSAFTRGGM 199

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
             EAL V+ EM   D+ P+EV + S++    ++     GKA+H    R  ++++L + + 
Sbjct: 200 FMEALGVLAEM---DVTPNEVTLASVLVACGNLGTARAGKAVHGWYFR--REKELNLIVG 254

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            AL+DMY KC  L  A+++F+ L    +VSWTVMISG ++C   +E + +F  M    V 
Sbjct: 255 NALLDMYVKCEKLDLARRVFDMLLARDIVSWTVMISGLVQCKRPSEALEVFNAMQISGVK 314

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P ++ + +++  C  +G L+ G+W+H YI R G E+ + +  ++VDMY KC  + +A ++
Sbjct: 315 PDKVVLSTVLSACASLGALESGRWVHEYIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSI 374

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F  M  K+V  WNA+I+ +A      +A + F  M  S + PNEVT + +L  C  +G +
Sbjct: 375 FQEMPLKNVSSWNALINGFALHGRGREALDCFDRMVASGLHPNEVTFITVLGACCHSGLV 434

Query: 393 EMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD-ICMWNAMMA 450
           + G+ L   + K   L         +VD+  + G +  AY +      R  +  W  +++
Sbjct: 435 QEGRQLFELMTKSYKLSPWEDHYGCMVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLS 494

Query: 451 GYGMHG---CGEEALIFFVDMERSGVKPNGI 478
               HG     ++ L+   ++E SG   NGI
Sbjct: 495 ACQAHGRMDFSQQILMHIHELESSG---NGI 522



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 51/218 (23%), Positives = 109/218 (50%), Gaps = 10/218 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +  +++  ++  +PS AL ++  M+ +G + D   + T+L ACA +     G+ +H 
Sbjct: 282 IVSWTVMISGLVQCKRPSEALEVFNAMQISGVKPDKVVLSTVLSACASLGALESGRWVHE 341

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +  + G++ D +V  +++ MY +CG L +A  +F EMP ++V SW+ +I G+   G   E
Sbjct: 342 YIERKGIEWDVHVGTSVVDMYVKCGCLDTAVSIFQEMPLKNVSSWNALINGFALHGRGRE 401

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK----DEKLGVAI 211
           AL+    M    + P+EV  I+++        V  G+ +   + ++ K    ++  G   
Sbjct: 402 ALDCFDRMVASGLHPNEVTFITVLGACCHSGLVQEGRQLFELMTKSYKLSPWEDHYGC-- 459

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMIS 248
              ++D+  + G +  A  +   +  +  V +W  ++S
Sbjct: 460 ---MVDLLGRAGLIQEAYDVIKAMPMRPGVFTWVTLLS 494


>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score =  357 bits (917), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 189/570 (33%), Positives = 312/570 (54%), Gaps = 3/570 (0%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           M K G  ++  +   + K C  +     GK  H   ++   + + ++ N +++MY +C S
Sbjct: 83  MDKVGISINPRSYEYLFKMCGTLGALSDGKLFHN-RLQRMANSNKFIDNCILKMYCDCKS 141

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
             SA   FD++ ++D+ SWST+I  Y   G  +EA+ +   M  + I P+     +++  
Sbjct: 142 FTSAERFFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMS 201

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
           F D + +DLGK IH+ ++R        ++I T + +MY KCG L  A+   N++ + + V
Sbjct: 202 FTDPSMLDLGKQIHSQLIR--IGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAV 259

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           + T ++ GY +     + + LF +MI E V         ++  C  +G L  GK +H+Y 
Sbjct: 260 ACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYC 319

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
           ++ G E  +++   LVD Y KC    +AR  F+ +   +   W+A+I+ Y Q+   D+A 
Sbjct: 320 IKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRAL 379

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
           E+F  ++   V  N      +   C+    L  G  +H    K+GL   +  ++A++ MY
Sbjct: 380 EVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMY 439

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
           +KCG V+ A++ F      D   W A++  +  HG   EAL  F +M+ SGV+PN +TFI
Sbjct: 440 SKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFI 499

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
           GLLNACSH+GLV EGK + D M    G+ P I+HY CM+D+  RAGLL EA E+I+S+P 
Sbjct: 500 GLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPF 559

Query: 542 RPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGV 601
            P+++ W +LL     H+N  +G IAA  I  ++P +    V+M N+YA+A +W++ A  
Sbjct: 560 EPDVMSWKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQF 619

Query: 602 RRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           R++M E  ++KE   S + V G VH+F+ G
Sbjct: 620 RKMMAERNLRKEVSCSWIIVKGKVHRFVVG 649



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 227/473 (47%), Gaps = 10/473 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L+ +++++++Y +  +   A+ ++  M   G   ++    T++ +     M  LGK+IH 
Sbjct: 157 LSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHS 216

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             I+ G   +  +   +  MY +CG L  A    ++M  ++ V+ + ++ GY +     +
Sbjct: 217 QLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRD 276

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIATA 214
           AL +  +M    +         ++   A + D+  GK IH+ C+    + E   V++ T 
Sbjct: 277 ALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESE---VSVGTP 333

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+D Y KC     A+Q F  +++ +  SW+ +I+GY +  + +  + +F  +  + V  +
Sbjct: 334 LVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLN 393

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
                ++   C  V  L  G  +HA  ++ G    L+  +A++ MY KC ++  A   F 
Sbjct: 394 SFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCGQVDYAHQAFL 453

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            +   D + W A+I A+A      +A  LF  M+ S VRPN VT +GLL+ C+ +G ++ 
Sbjct: 454 TIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLNACSHSGLVKE 513

Query: 395 G-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGY 452
           G K L +  ++ G+   +     ++D+Y++ G +  A  +     +  D+  W +++ G 
Sbjct: 514 GKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKSLLGGC 573

Query: 453 GMHGCGEEALIFFVDMERSGVKP-NGITFIGLLNACSHAGLVTEGKSVFDKMV 504
             H   E  +I   ++ R  + P +  T++ + N  + AG   E  + F KM+
Sbjct: 574 WSHRNLEIGMIAADNIFR--LDPLDSATYVIMFNLYALAGKWDEA-AQFRKMM 623



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 160/322 (49%), Gaps = 9/322 (2%)

Query: 34  NPLTRYNS-----LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH 88
           N +TR N+     L+  Y K  +   AL ++  M   G E+D F    ILKACA +   +
Sbjct: 251 NKMTRKNAVACTGLMVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLY 310

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
            GK+IH + IK GL+ +  V   L+  Y +C    +AR  F+ +   +  SWS +I GY 
Sbjct: 311 TGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYC 370

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           + G  + ALEV + +R   +  +     ++    + V+D+  G  IHA  ++  K     
Sbjct: 371 QSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIK--KGLVAY 428

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           ++  +A+I MYSKCG + YA Q F  +++   V+WT +I  +    +  E +RLF EM  
Sbjct: 429 LSGESAMISMYSKCGQVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQG 488

Query: 269 ENVFPSEITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
             V P+ +T + L+  C   G ++ G K L +     G   ++   N ++D+Y +   ++
Sbjct: 489 SGVRPNAVTFIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQ 548

Query: 328 SARTLFDGMK-SKDVMIWNAVI 348
            A  +   +    DVM W +++
Sbjct: 549 EALEVIRSLPFEPDVMSWKSLL 570


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 214/643 (33%), Positives = 340/643 (52%), Gaps = 61/643 (9%)

Query: 22  KTHFKFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILK- 79
           K   K S + I++  + ++N  +++Y++  +  SAL+++  MR+  +   N  I   L  
Sbjct: 45  KLESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSN 104

Query: 80  ---ACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
               CA+ +   +             D D    N ++  Y + G+L +AR LF++MP +D
Sbjct: 105 NKFDCARKVFEKMP------------DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKD 152

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           VVSW+ M+ G+ + G  EEA ++  +M    +  +E++   ++S +     ++  + +  
Sbjct: 153 VVSWNAMLSGFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFD 208

Query: 197 C------VVRNC------KDEKLGVAIA-------------TALIDMYSKCGNLAYAKQL 231
                  V  NC      + ++L  A +               +I  Y++ G L+ A++L
Sbjct: 209 SKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRL 268

Query: 232 FNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL 291
           F  L    V +WT M+SG+++   ++E  R+F EM E+N    E++  ++I   G+V   
Sbjct: 269 FEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKN----EVSWNAMI--AGYVQSQ 322

Query: 292 QLGKWLHAYIL---RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
           Q+ K    +     RN   +     N +V  Y +C  I  A+ LFD M  +D + W A+I
Sbjct: 323 QIEKARELFDQMPSRNTSSW-----NTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMI 377

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
           S YAQ+   ++A  LFI MK      N   +   LS C E  ALE+GK LH  + K G +
Sbjct: 378 SGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQ 437

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
              I   AL+ MY KCG +  A+ +F +   +DI  WN M+AGY  HG G+EAL  F  M
Sbjct: 438 TGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM 497

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
           + + +KP+ +T +G+L+ACSH G V +G   F+ M    G+    +HY CM+DLLGRAG 
Sbjct: 498 KMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGR 556

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNI 588
           LDEA  ++KSMP  P+   WGALL AS++H +  +GE AA ++ E+EP N G  VL+SN+
Sbjct: 557 LDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNL 616

Query: 589 YAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           YA + RW +V  +R  M++  VKK PG+S VE+    H F  G
Sbjct: 617 YAASGRWREVREMRSKMRDKGVKKVPGYSWVEIQNKTHIFTVG 659


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  357 bits (916), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 210/646 (32%), Positives = 330/646 (51%), Gaps = 33/646 (5%)

Query: 17  HAHIIKTHFK---FSYTNII---------------------NPLTRYNSLVTSYIKNNKP 52
           H H+IKT FK   F   N++                       +  +NSL++ Y +    
Sbjct: 42  HMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFY 101

Query: 53  SSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNAL 112
              +N++   R +   +D FT    L  C + L   LG+ IH     +GL G   ++N+L
Sbjct: 102 HEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSL 161

Query: 113 IQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSE 172
           I MY +CG +  AR +F+     D VSW+++I GY R G  +E L ++ +M    +  + 
Sbjct: 162 IDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNS 221

Query: 173 VAMISMVSLFAD--VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQ 230
            A+ S +        + ++ GK +H C V+   D  L V + TAL+D Y+K G+L  A +
Sbjct: 222 YALGSALKACGSNFSSSIECGKMLHGCAVKLGLD--LDVVVGTALLDTYAKIGDLEDATK 279

Query: 231 LFNRLNQNSVVSWTVMISGYIRCNEI-----NEGVRLFAEMIEENVFPSEITILSLIIEC 285
           +F  +   +VV +  MI+G+++   +     NE + LF EM    + PSE T  S++  C
Sbjct: 280 IFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKAC 339

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
             +   + GK +HA I +   +    + NALV++Y     I      F      DV+ W 
Sbjct: 340 STIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLDVVSWT 399

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
           ++I  + Q    +    LF  +  S  +P+E T+  +LS C    A++ G+ +H Y  K 
Sbjct: 400 SLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKT 459

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
           G+    I++ + + MYAKCGD++ A   F E    DI  W+ M++    HGC +EA+  F
Sbjct: 460 GIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLF 519

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
             M+ SG+ PN ITF+G+L ACSH GLV EG   F+ M    G+ P ++H  C+VDLLGR
Sbjct: 520 ELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGR 579

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLM 585
           AG L EA   I       + ++W +LL+A ++HK    G+  A +++E+EP+     VL+
Sbjct: 580 AGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLL 639

Query: 586 SNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            NIY  A        +R +MK+  VKKEPG S +EV  +VH F+ G
Sbjct: 640 YNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAG 685



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 252/503 (50%), Gaps = 17/503 (3%)

Query: 66  GSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSA 125
           G  +D+ T   +++   +      GK  H   IK       ++ N L+ MY +CG    A
Sbjct: 14  GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73

Query: 126 RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV 185
           + LFD MP R+VVSW+++I GY + G   E + + +E R  D+R  +    + +S+    
Sbjct: 74  KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRT 133

Query: 186 ADVDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSW 243
            D+ LG+ IHA +  +     LG  V +  +LIDMY KCG + +A+ +F   ++   VSW
Sbjct: 134 LDLRLGRLIHALITVS----GLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSW 189

Query: 244 TVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG--FVGGLQLGKWLHAYI 301
             +I+GY+R    +E +RL  +M+   +  +   + S +  CG  F   ++ GK LH   
Sbjct: 190 NSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCA 249

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI---- 357
           ++ G +  + +  AL+D Y K  ++  A  +F  M   +V+++NA+I+ + Q   +    
Sbjct: 250 VKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEF 309

Query: 358 -DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
            ++A  LF  M+   ++P+E T   +L  C+   A E GK +H  I K  L+ D  +  A
Sbjct: 310 ANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNA 369

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           LV++Y+  G +    + F      D+  W +++ G+  +G  E  L  F ++  SG KP+
Sbjct: 370 LVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPD 429

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEM 535
             T   +L+AC++   V  G+ +    +  G+G    I++    + +  + G +D A+  
Sbjct: 430 EFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQN--SQICMYAKCGDIDSANMT 487

Query: 536 IKSMPLRPNMIVWGALLAASKLH 558
            K     P+++ W  +++++  H
Sbjct: 488 FKETK-NPDIVSWSVMISSNAQH 509


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  357 bits (915), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 201/600 (33%), Positives = 317/600 (52%), Gaps = 9/600 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL++ Y +       +N++   R +   +D FT    L  C + L   LG+ IH    
Sbjct: 9   WNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALIT 68

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +GL G   ++N+LI MY +CG +  AR +F+     D VSW+++I GY R G  +E L 
Sbjct: 69  VSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGSNDEMLR 128

Query: 159 VMREMRFMDIRPSEVAMISMVSLFAD--VADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           ++ +M    +  +  A+ S +        + ++ GK +H C V+   D  L V + TAL+
Sbjct: 129 LLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLD--LDVVVGTALL 186

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI-----NEGVRLFAEMIEENV 271
           D Y+K G+L  A ++F  +   +VV +  MI+G+++   +     NE + LF EM    +
Sbjct: 187 DTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGM 246

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            PSE T  S++  C  +   + GK +HA I +   +    + NALV++Y     I     
Sbjct: 247 KPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLK 306

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
            F      DV+ W ++I  + Q    +    LF  +  S  +P+E T+  +LS C    A
Sbjct: 307 CFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAA 366

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           ++ G+ +H Y  K G+    I++ + + MYAKCGD++ A   F E    DI  W+ M++ 
Sbjct: 367 VKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISS 426

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
              HGC +EA+  F  M+ SG+ PN ITF+G+L ACSH GLV EG   F+ M    G+ P
Sbjct: 427 NAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITP 486

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
            ++H  C+VDLLGRAG L EA   I       + ++W +LL+A ++HK    G+  A ++
Sbjct: 487 NVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRVAERV 546

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +E+EP+     VL+ NIY  A        +R +MK+  VKKEPG S +EV  +VH F+ G
Sbjct: 547 IELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWIEVGNVVHSFVAG 606



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 223/437 (51%), Gaps = 17/437 (3%)

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           MP R+VVSW+++I GY + G   E + + +E R  D+R  +    + +S+     D+ LG
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 192 KAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
           + IHA +  +     LG  V +  +LIDMY KCG + +A+ +F   ++   VSW  +I+G
Sbjct: 61  RLIHALITVS----GLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAG 116

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG--FVGGLQLGKWLHAYILRNGFE 307
           Y+R    +E +RL  +M+   +  +   + S +  CG  F   ++ GK LH   ++ G +
Sbjct: 117 YVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLD 176

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI-----DKAFE 362
             + +  AL+D Y K  ++  A  +F  M   +V+++NA+I+ + Q   +     ++A  
Sbjct: 177 LDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMY 236

Query: 363 LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYA 422
           LF  M+   ++P+E T   +L  C+   A E GK +H  I K  L+ D  +  ALV++Y+
Sbjct: 237 LFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYS 296

Query: 423 KCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
             G +    + F      D+  W +++ G+  +G  E  L  F ++  SG KP+  T   
Sbjct: 297 LSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISI 356

Query: 483 LLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
           +L+AC++   V  G+ +    +  G+G    I++    + +  + G +D A+   K    
Sbjct: 357 MLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQN--SQICMYAKCGDIDSANMTFKETK- 413

Query: 542 RPNMIVWGALLAASKLH 558
            P+++ W  +++++  H
Sbjct: 414 NPDIVSWSVMISSNAQH 430


>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Cucumis sativus]
          Length = 675

 Score =  357 bits (915), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 225/645 (34%), Positives = 353/645 (54%), Gaps = 54/645 (8%)

Query: 23  THFKFSYTNI-INPLTRYNSLVTSYIKNNKP--SSALNIYAFMRKNGSEVDNFTIPTILK 79
           +HF F   N+ +N L  +  L TS     KP  +S  N++         + N T+  IL+
Sbjct: 12  SHFSFFPLNLALNILHSFRPLSTSS-SPGKPKWNSLSNVF---------ISNPTL-LILQ 60

Query: 80  ACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMPNRDV 137
           +C+ +      K+I       GL    + ++ L+     S+ G +  A  +FD+    + 
Sbjct: 61  SCSSMFQL---KQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAHLIFDQTELPNC 117

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
             W+TMI+GY +   P       R+M          + +  +      A+  +G A+H+ 
Sbjct: 118 FFWNTMIKGYCKANHPSMGFSFFRQMIRNRAEFDSGSFVFALKACGQFAEKIVGMAVHSV 177

Query: 198 VVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN 257
           + +   D  L V     LI  Y + G L +A+Q+F+  +   VV+WT MI+GY R N ++
Sbjct: 178 IWKRGFDSDLFVQ--NGLIQNYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLD 235

Query: 258 EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALV 317
           E + LF  M+  +V P+E+T+++L+  C   G  ++GK LH +I R     SL + NA++
Sbjct: 236 EAIALFNSMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAML 295

Query: 318 DMYGKC------REI-------------------------RSARTLFDGMKSKDVMIWNA 346
           DMY KC      REI                          SAR LFD M  ++++ WNA
Sbjct: 296 DMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNA 355

Query: 347 VISAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH-TYIEK 404
           +I+ Y+Q     +A ELF +M  V  + P E T+V +LS   + G LEMG+ +H  ++ K
Sbjct: 356 MIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNK 415

Query: 405 QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIF 464
            G++V +ILK A++DMYAKCG ++ A +LF     +++  WN+M++ Y  +G  ++AL  
Sbjct: 416 IGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYGHAKKALTL 475

Query: 465 FVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLG 524
           F  M  SG+KP+ ITFIG+L+ACS+ G V+EG++ F+ M +  G+ PK EHY CMVDLL 
Sbjct: 476 FDQMIGSGLKPDHITFIGVLSACSYGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLS 535

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVL 584
           R GLL EA+E+I  MP+  +   WGALL A + H N  M ++A  ++LE++P++ G   L
Sbjct: 536 RVGLLKEAYELISRMPMEASEGGWGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSL 595

Query: 585 MSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           ++NI A   +W DV  VRR+M+E  VKK PG S +E+ G  H+F+
Sbjct: 596 LANICADGKKWKDVRMVRRMMRERGVKKVPGHSLIEIEGKFHEFL 640


>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 199/592 (33%), Positives = 315/592 (53%), Gaps = 38/592 (6%)

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           I ++L +C  V     G+++HG  I  G +    +   L+  YS    LV A  + +   
Sbjct: 177 ISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSN 236

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
                 W+ +I  Y R G  ++AL   ++M    IRP      S++    +  D+  GK 
Sbjct: 237 ILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKE 296

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           +H  +  N    K  + +  ALI MY KCG +  A+ LF+++ +   VSW  MIS Y   
Sbjct: 297 VHESI--NASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASM 354

Query: 254 NEINEGVRLFAEMIEENV--------------------------------FPSEITILSL 281
              NE   LF  M  E++                                  S +  ++L
Sbjct: 355 GMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVAL 414

Query: 282 II---ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           II    C  +G  +LGK +H++ +R+ F     + N+L+ MY +C++++ A  LF  M++
Sbjct: 415 IIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEA 474

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K ++ WN++IS        ++A  L   M +S + PN VT+  +L LC     L+ GK  
Sbjct: 475 KSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEF 534

Query: 399 HTYI-EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           H Y+  ++  +  ++L  ALVDMYA+ G V  A R+F     RD   + +M+AGYGM G 
Sbjct: 535 HCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGE 594

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G+ AL  F +M    +KP+ IT I +L+ACSH+GLVT+G+ +F+KM    GL P +EH+ 
Sbjct: 595 GQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFA 654

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CM DL GRAGLL++A E+I++MP +P   +W  L+ A ++H+N  +GE AA ++LE++P+
Sbjct: 655 CMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPE 714

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           N GY VL++N+YA A  WN +A VR  M+++ V+K PG + V+V      F+
Sbjct: 715 NPGYYVLIANMYAAAGCWNKLAKVRXFMRDLGVRKAPGCAWVDVGTGFSPFL 766



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/474 (30%), Positives = 232/474 (48%), Gaps = 41/474 (8%)

Query: 20  IIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILK 79
           ++  H     +NI++P   +N L++SY++N     AL+ Y  M K G   DNFT P++LK
Sbjct: 225 LVDAHVITENSNILHPFP-WNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLK 283

Query: 80  ACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVS 139
           AC + L    GKE+H     + +     V NALI MY +CG +  AR LFD++P RD VS
Sbjct: 284 ACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVS 343

Query: 140 WSTMIR-----------------------------------GYHRGGLPEEALEVMREMR 164
           W++MI                                    GY R G  + ALE++ +MR
Sbjct: 344 WNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMR 403

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
                   VA+I  +   + + D  LGK IH+  +R+C  E     +  +LI MYS+C +
Sbjct: 404 KXGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEV--DTVKNSLITMYSRCKD 461

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           L +A  LF  +   S++SW  +ISG    +   E   L  EM+   + P+ +TI S++  
Sbjct: 462 LKHAYLLFQLMEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPL 521

Query: 285 CGFVGGLQLGKWLHAYIL-RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
           C  V  LQ GK  H Y+  R  F+  L + NALVDMY +  ++  AR +FD +  +D M 
Sbjct: 522 CARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMT 581

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           + ++I+ Y        A +LF  M   +++P+ +TM+ +LS C+ +G +  G+ L   + 
Sbjct: 582 YTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMR 641

Query: 404 K-QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI-CMWNAMMAGYGMH 455
              GL   +     + D++ + G +N A  +     Y+    MW  ++    +H
Sbjct: 642 SLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIH 695



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 111/240 (46%), Gaps = 6/240 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NS+++     ++   A  +   M  +G E +  TI ++L  CA+V     GKE H 
Sbjct: 477 LISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHC 536

Query: 96  FAI-KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           +   +        + NAL+ MY+  G ++ AR +FD +  RD +++++MI GY   G  +
Sbjct: 537 YMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQ 596

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
            AL++  EM    I+P  + MI+++S  +    V  G+ +    +R+       +     
Sbjct: 597 AALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFE-KMRSLYGLTPHLEHFAC 655

Query: 215 LIDMYSKCGNLAYAKQLF-NRLNQNSVVSWTVMISG--YIRCNEINE-GVRLFAEMIEEN 270
           + D++ + G L  AK++  N   + +   W  +I      R  EI E       EM  EN
Sbjct: 656 MTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPEN 715


>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like, partial [Cucumis sativus]
          Length = 610

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 194/555 (34%), Positives = 309/555 (55%), Gaps = 16/555 (2%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           ++L++C  V +    +++    I +G   + YV+  ++  +     +  AR+LFD  P+ 
Sbjct: 30  SLLRSCKTVALL---QKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDP 86

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
            V  W+ + RGY       E + +  +M+ MD+RP+      ++   A +     G+ IH
Sbjct: 87  KVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIH 146

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
             V++   +    VA  T LID+YS    +  A +LF  + + ++V+WT MISGYI CN 
Sbjct: 147 CEVIKGGLEGNQFVA--TTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNR 204

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA-N 314
           +    RLF      ++ P    +L  I+  G++   ++G    A  L +   +   M+ N
Sbjct: 205 VALARRLF------DLAPERDVVLWNIMVSGYI---EIGDMKAARKLFDTMPYRDTMSWN 255

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VR 373
            +++ Y    ++ +   LF+ M  ++V  WN +I  YA   C  +    F  M +   V 
Sbjct: 256 TMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVV 315

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           PN+ T+V +LS C   GAL++GKW+H Y    G +  + +  AL+DMY+KCG +  A  +
Sbjct: 316 PNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEV 375

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F     +D+  WN+M+ G   HGCG +AL  F  M+ +G KP+GITFIG+L +C+H GLV
Sbjct: 376 FESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLV 435

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            EG S F+ MV+   + P+IEHYGCMVDL GRAGLLD A E +K MP+  + ++W ALL 
Sbjct: 436 EEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLG 495

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           A +++KN  + E+A  +++ +EP+N    VL+SNIY    RW DVA ++ +M++   KK 
Sbjct: 496 ACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKL 555

Query: 614 PGFSSVEVNGLVHKF 628
           PG S +EVN  V +F
Sbjct: 556 PGCSLIEVNDSVVEF 570



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 216/442 (48%), Gaps = 23/442 (5%)

Query: 14  RQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT 73
           +  HA  +  HF      + N ++R       Y  N      + ++  M+      + FT
Sbjct: 72  QMAHARHLFDHFPDPKVELWNAISR------GYFHNAFYREVVFLFGKMKSMDVRPNCFT 125

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
            P +LK+CA++     G+EIH   IK GL+G+ +V+  LI +YS   ++ SA  LF  M 
Sbjct: 126 FPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGML 185

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMI--SMVSLFADVADVDLG 191
            R++V+W++MI GY           V    R  D+ P    ++   MVS + ++ D+   
Sbjct: 186 ERNIVAWTSMISGYILCN------RVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAA 239

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           + +   +                +++ Y+  G++   +QLF  + + +V SW  +I GY 
Sbjct: 240 RKLFDTMPYR------DTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYA 293

Query: 252 RCNEINEGVRLFAEM-IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
                 E +R F  M I+  V P++ T+++++  C  +G L LGKW+H Y    GF+ S+
Sbjct: 294 HNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSI 353

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
            + NAL+DMY KC  I +A  +F+ M  KD++ WN++I   A   C   A  LF  MK++
Sbjct: 354 YVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKIN 413

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
             +P+ +T +G+L  CT  G +E G  + ++ + +  +   +     +VD++ + G ++ 
Sbjct: 414 GEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDR 473

Query: 430 AYRLFSE-AIYRDICMWNAMMA 450
           A        +  D  +W A++ 
Sbjct: 474 AIEFVKRMPMEADAVIWAALLG 495



 Score = 47.0 bits (110), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 44/213 (20%), Positives = 91/213 (42%), Gaps = 12/213 (5%)

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
           E   + LL  C     L+    +   I   G + +  +   +V  +     +  A  LF 
Sbjct: 25  EEHFISLLRSCKTVALLQK---VQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFD 81

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
                 + +WNA+  GY  +    E +  F  M+   V+PN  TF  +L +C+  G   E
Sbjct: 82  HFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVE 141

Query: 496 GKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAAS 555
           G+ +  +++ G GL         ++D+      +  A+++   M L  N++ W ++++  
Sbjct: 142 GEEIHCEVIKG-GLEGNQFVATTLIDVYSGGRAIGSAYKLFVGM-LERNIVAWTSMISGY 199

Query: 556 KLHKNPSMGEIAATQILEIEPQNYGYNVLMSNI 588
            L    ++    A ++ ++ P+    +V++ NI
Sbjct: 200 ILCNRVAL----ARRLFDLAPER---DVVLWNI 225


>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74600, chloroplastic; Flags: Precursor
 gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
 gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 895

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 194/595 (32%), Positives = 333/595 (55%), Gaps = 11/595 (1%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           ++ I NP +  +  +++ Y K+N   SAL I+  MR +G E++N T+ +++ AC +  M 
Sbjct: 308 FSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF---DEMPNRDVVSWSTMI 144
               ++H +  K+G   D+ V+ ALI MYS+ G +  +  +F   D++  +++V+   MI
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMI 425

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
             + +   P +A+ +   M    +R  E ++ S++S+   +  ++LGK +H   +++   
Sbjct: 426 TSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKS--G 480

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
             L + + ++L  +YSKCG+L  + +LF  +       W  MISG+     + E + LF+
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFS 540

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           EM+++   P E T+ +++  C     L  GK +H Y LR G +  + + +ALV+MY KC 
Sbjct: 541 EMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG 600

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            ++ AR ++D +   D +  +++IS Y+Q   I   F LF  M +S    +   +  +L 
Sbjct: 601 SLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILK 660

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
               +    +G  +H YI K GL  +  + ++L+ MY+K G ++   + FS+    D+  
Sbjct: 661 AAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIA 720

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           W A++A Y  HG   EAL  +  M+  G KP+ +TF+G+L+ACSH GLV E     + MV
Sbjct: 721 WTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMV 780

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
              G+ P+  HY CMVD LGR+G L EA   I +M ++P+ +VWG LLAA K+H    +G
Sbjct: 781 KDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELG 840

Query: 565 EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           ++AA + +E+EP + G  + +SNI A    W++V   R++MK   V+KEPG+SSV
Sbjct: 841 KVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 134/502 (26%), Positives = 253/502 (50%), Gaps = 8/502 (1%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           N +++ Y ++     +L  ++ M   G E +  +  +++ AC+ +      + +    IK
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIK 178

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
            G      V +ALI ++S+      A  +F +  + +V  W+T+I G  R        ++
Sbjct: 179 MGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDL 238

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
             EM     +P      S+++  A +  +  GK + A V++ C  E   V + TA++D+Y
Sbjct: 239 FHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIK-CGAED--VFVCTAIVDLY 295

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
           +KCG++A A ++F+R+   SVVSWTVM+SGY + N+    + +F EM    V  +  T+ 
Sbjct: 296 AKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVT 355

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS- 338
           S+I  CG    +     +HA++ ++GF    ++A AL+ MY K  +I  +  +F+ +   
Sbjct: 356 SVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDI 415

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +   I N +I++++Q+    KA  LF  M    +R +E ++  LLS+      L +GK +
Sbjct: 416 QRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQV 472

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H Y  K GL +D+ + ++L  +Y+KCG +  +Y+LF    ++D   W +M++G+  +G  
Sbjct: 473 HGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYL 532

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EA+  F +M   G  P+  T   +L  CS    +  GK +    +   G+   ++    
Sbjct: 533 REAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRA-GIDKGMDLGSA 591

Query: 519 MVDLLGRAGLLDEAHEMIKSMP 540
           +V++  + G L  A ++   +P
Sbjct: 592 LVNMYSKCGSLKLARQVYDRLP 613



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 136/545 (24%), Positives = 251/545 (46%), Gaps = 55/545 (10%)

Query: 27  FSYTNIINPLTRY-NSLVTSYIKNNKPSSALNIYAFMR-KNGSEVDNFTIPTILKACAQV 84
           FS + +++ +T + N L  S   ++  S+  N + F   ++ S + N     IL+A   +
Sbjct: 17  FSTSRLLSSVTNFRNQLSFSSKDSSSSSAPFNPFRFFNDQSNSRLCNLRTTKILQA--HL 74

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
           L  +L            L  D +++ +L+  YS  GS+  A  LFD +P  DVVS + MI
Sbjct: 75  LRRYL------------LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMI 122

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
            GY +  L EE+L    +M F+    +E++  S++S  + +      + +  C    C  
Sbjct: 123 SGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELV--C----CHT 176

Query: 205 EKLGV----AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
            K+G      + +ALID++SK      A ++F      +V  W  +I+G +R        
Sbjct: 177 IKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVF 236

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
            LF EM      P   T  S++  C  +  L+ GK + A +++ G E  + +  A+VD+Y
Sbjct: 237 DLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLY 295

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
            KC  +  A  +F  + +  V+ W  ++S Y +++    A E+F  M+ S V  N  T+ 
Sbjct: 296 AKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVT 355

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
            ++S C     +     +H ++ K G  +D  +  AL+ MY+K GD++      SE ++ 
Sbjct: 356 SVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDID-----LSEQVFE 410

Query: 441 DI------CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA--CSHAGL 492
           D+       + N M+  +       +A+  F  M + G++ +  +   LL+   C + G 
Sbjct: 411 DLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG- 469

Query: 493 VTEGKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
                    K VHG     GLV  +     +  L  + G L+E++++ + +P + N   W
Sbjct: 470 ---------KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNA-CW 519

Query: 549 GALLA 553
            ++++
Sbjct: 520 ASMIS 524


>gi|242066372|ref|XP_002454475.1| hypothetical protein SORBIDRAFT_04g031840 [Sorghum bicolor]
 gi|241934306|gb|EES07451.1| hypothetical protein SORBIDRAFT_04g031840 [Sorghum bicolor]
          Length = 706

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 204/594 (34%), Positives = 327/594 (55%), Gaps = 39/594 (6%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSE-----VDNFTIPTILKACAQVLMTHLGKEI 93
           Y SL++++ +   P  AL  +  M   G        + FT   +L+AC       LG+ +
Sbjct: 99  YASLISAHCRLGAPLDALRAFLDMLDWGCSDAAVRPNEFTAAAVLQACGLARDERLGRMV 158

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG+ +  G  GD +V  +L+ MY++ G +VSAR L   +P RDVVSW+ +I G    G+ 
Sbjct: 159 HGYLVAGGFCGDPFVVGSLVNMYAKAGDVVSARRLVLGLPCRDVVSWTAIISGCVLNGML 218

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           EE LEV   M    + P+ V M+S++   + +   +L   +HA VV    + +   ++  
Sbjct: 219 EEGLEVFVMMLEDGVLPNNVTMLSVIQACSLMGASELFSPVHALVV--LLELEHDASVVN 276

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           +LI MY+K G +  A  LF                 Y++                 NV  
Sbjct: 277 SLIMMYAKNGFVEEAIWLFRGF--------------YLKSG---------------NVCS 307

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +E  + +++  C   G ++ G  +HA+ ++ G   S+++ N+L+ MY +  +I +A  +F
Sbjct: 308 NEDVLAAVLYGCTISGSVKNGVGVHAHTIKIGAFPSISIENSLMGMYARFEQIDAAHFVF 367

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELF--IHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +GMK KD++ WN +IS  A++  +++A ELF  +H     + P+ VT++ +L  C+ AG 
Sbjct: 368 EGMKVKDIVSWNTIISCLAKSDRVNEAMELFSVLHAAAGGLAPDFVTVLSILQACSNAGL 427

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L  G+ LH YI K G   DV +  AL+ MYAK G ++ A  +F     +D+  WN+M+  
Sbjct: 428 LHQGQMLHGYIMKSGFVYDVSICNALITMYAKLGRIDFAEMIFERMDIKDLVSWNSMINA 487

Query: 452 YGMHGCGEEALIFFVDMERSGVK-PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           YGMHG G  AL  F  ++ +G   PN ITF+ +++ACSH+GL++EG   F+ M     + 
Sbjct: 488 YGMHGDGHLALRVFHQLKDAGTPVPNAITFVSVISACSHSGLISEGYKCFESMGRDHSIE 547

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           P ++HY C+VDLLGR+G   EA E I+ MP+ PN  +WG LLAA +LH N  + E AA +
Sbjct: 548 PSMDHYACVVDLLGRSGRFAEAEEFIRDMPVHPNSSIWGPLLAACQLHGNVDLAEKAAKE 607

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
           +  +EP++  + V +SN YA A RW D A +R  M+ + ++KE G+S V+V G+
Sbjct: 608 LSALEPESDIWRVSLSNTYASAGRWRDAAKIRTEMRRVGLRKETGWSFVDVGGV 661


>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 652

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 194/555 (34%), Positives = 309/555 (55%), Gaps = 16/555 (2%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           ++L++C  V +    +++    I +G   + YV+  ++  +     +  AR+LFD  P+ 
Sbjct: 72  SLLRSCKTVALL---QKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFPDP 128

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
            V  W+ + RGY       E + +  +M+ MD+RP+      ++   A +     G+ IH
Sbjct: 129 KVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEEIH 188

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
             V++   +    VA  T LID+YS    +  A +LF  + + ++V+WT MISGYI CN 
Sbjct: 189 CEVIKGGLEGNQFVA--TTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNR 246

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA-N 314
           +    RLF      ++ P    +L  I+  G++   ++G    A  L +   +   M+ N
Sbjct: 247 VALARRLF------DLAPERDVVLWNIMVSGYI---EIGDMKAARKLFDTMPYRDTMSWN 297

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VR 373
            +++ Y    ++ +   LF+ M  ++V  WN +I  YA   C  +    F  M +   V 
Sbjct: 298 TMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVV 357

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           PN+ T+V +LS C   GAL++GKW+H Y    G +  + +  AL+DMY+KCG +  A  +
Sbjct: 358 PNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEV 417

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F     +D+  WN+M+ G   HGCG +AL  F  M+ +G KP+GITFIG+L +C+H GLV
Sbjct: 418 FESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHLGLV 477

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            EG S F+ MV+   + P+IEHYGCMVDL GRAGLLD A E +K MP+  + ++W ALL 
Sbjct: 478 EEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALLG 537

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           A +++KN  + E+A  +++ +EP+N    VL+SNIY    RW DVA ++ +M++   KK 
Sbjct: 538 ACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGSKKL 597

Query: 614 PGFSSVEVNGLVHKF 628
           PG S +EVN  V +F
Sbjct: 598 PGCSLIEVNDSVVEF 612



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 216/442 (48%), Gaps = 23/442 (5%)

Query: 14  RQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT 73
           +  HA  +  HF      + N ++R       Y  N      + ++  M+      + FT
Sbjct: 114 QMAHARHLFDHFPDPKVELWNAISR------GYFHNAFYREVVFLFGKMKSMDVRPNCFT 167

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
            P +LK+CA++     G+EIH   IK GL+G+ +V+  LI +YS   ++ SA  LF  M 
Sbjct: 168 FPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGML 227

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMIS--MVSLFADVADVDLG 191
            R++V+W++MI GY           V    R  D+ P    ++   MVS + ++ D+   
Sbjct: 228 ERNIVAWTSMISGYILCN------RVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAA 281

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           + +   +                +++ Y+  G++   +QLF  + + +V SW  +I GY 
Sbjct: 282 RKLFDTMPYR------DTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYA 335

Query: 252 RCNEINEGVRLFAEM-IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
                 E +R F  M I+  V P++ T+++++  C  +G L LGKW+H Y    GF+ S+
Sbjct: 336 HNGCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSI 395

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
            + NAL+DMY KC  I +A  +F+ M  KD++ WN++I   A   C   A  LF  MK++
Sbjct: 396 YVGNALIDMYSKCGLIENAMEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKIN 455

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
             +P+ +T +G+L  CT  G +E G  + ++ + +  +   +     +VD++ + G ++ 
Sbjct: 456 GEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDR 515

Query: 430 AYRLFSE-AIYRDICMWNAMMA 450
           A        +  D  +W A++ 
Sbjct: 516 AIEFVKRMPMEADAVIWAALLG 537



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/226 (19%), Positives = 97/226 (42%), Gaps = 9/226 (3%)

Query: 363 LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYA 422
            FI   +++  P  V     +SL      + + + +   I   G + +  +   +V  + 
Sbjct: 51  FFIDDTLTQKHPRWVLEEHFISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWV 110

Query: 423 KCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
               +  A  LF       + +WNA+  GY  +    E +  F  M+   V+PN  TF  
Sbjct: 111 GLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPL 170

Query: 483 LLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
           +L +C+  G   EG+ +  +++ G GL         ++D+      +  A+++   M L 
Sbjct: 171 VLKSCAKIGAFVEGEEIHCEVIKG-GLEGNQFVATTLIDVYSGGRAIGSAYKLFVGM-LE 228

Query: 543 PNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNI 588
            N++ W ++++   L    ++    A ++ ++ P+    +V++ NI
Sbjct: 229 RNIVAWTSMISGYILCNRVAL----ARRLFDLAPER---DVVLWNI 267


>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
          Length = 818

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 181/514 (35%), Positives = 302/514 (58%), Gaps = 2/514 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y+KN    +A  ++  MR+  +  ++ T   +L  CA  +M + G ++HG  +
Sbjct: 216 WNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVV 275

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +GL+ D+ V+N L+ MY++CG L  AR LFD MP  D+V+W+ MI GY + G  +EA  
Sbjct: 276 SSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASC 335

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  EM    ++P  +   S + L ++ A +  GK IH  ++RN     L V + +ALID+
Sbjct: 336 LFHEMISAGMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRN--GVSLDVFLKSALIDI 393

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC ++  A ++F++     +V  T MISGY+     N  + +F  +++E +  + +T+
Sbjct: 394 YFKCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTL 453

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  L LGK LH +IL+NG   S  + +A++DMY KC ++  A   F G+  
Sbjct: 454 ASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISX 513

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN++I++ +Q    ++A +LF  M ++  + + V++   LS C    AL  GK +
Sbjct: 514 KDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEI 573

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H ++ +     D+  ++AL+DMY+KCG+++ A R+F     ++   WN+++A YG HG  
Sbjct: 574 HAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDMMEEKNEVSWNSIIAAYGNHGRL 633

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +++L  F  M   G++P+ +TF+ +++AC HAG V EG   F  M   LG++ ++EHY C
Sbjct: 634 KDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYAC 693

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           MVDL GRAG L+EA  MI SMP  P+  VWG  L
Sbjct: 694 MVDLFGRAGRLNEAFGMINSMPFSPDAGVWGLYL 727



 Score =  271 bits (693), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 162/520 (31%), Positives = 272/520 (52%), Gaps = 4/520 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  +    +   AL  Y  M   G+  D +T P ++KAC  +    LG+ +H    
Sbjct: 115 WNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQ 174

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G + D +V ++LI+ YSE G +  ARYLFD MP++D V W+ M+ GY + G  + A  
Sbjct: 175 FMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDNATG 234

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V  EMR  +  P+ V    ++S+ A    ++ G  +H  VV +    ++   +A  L+ M
Sbjct: 235 VFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSS--GLEMDSPVANTLLAM 292

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG+L  A++LF+ + +  +V+W  MISGY++   ++E   LF EMI   + P  IT 
Sbjct: 293 YAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSITF 352

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +        L+ GK +H YI+RNG    + + +AL+D+Y KCR++  A  +FD    
Sbjct: 353 SSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQRTP 412

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D+++  A+IS Y      + A E+F  +   ++R N VT+  +L  C    AL +GK L
Sbjct: 413 VDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKEL 472

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H +I K G      + +A++DMYAKCG ++ A++ F     +D   WN+M+     +G  
Sbjct: 473 HGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISXKDAVCWNSMITSCSQNGKP 532

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           EEA+  F  M  +G K + ++    L+AC++   +  GK +   M+ G      +     
Sbjct: 533 EEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRG-AFRSDLFAESA 591

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           ++D+  + G LD A  +   M  + N + W +++AA   H
Sbjct: 592 LIDMYSKCGNLDLACRVFDMMEEK-NEVSWNSIIAAYGNH 630



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 241/492 (48%), Gaps = 16/492 (3%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           +IL+ C        G++ H   + NG+  +  +   L+ MY  CG+ + A+ +F ++   
Sbjct: 51  SILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLW 110

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
               W+ MIRG+   G  + AL    +M      P +     ++     +  V LG+ +H
Sbjct: 111 CSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVH 170

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
             +       +L V + ++LI  YS+ G +  A+ LF+R+     V W VM++GY++  +
Sbjct: 171 DKI--QFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
            +    +F EM      P+ +T   ++  C     +  G  LH  ++ +G E    +AN 
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
           L+ MY KC  +  AR LFD M   D++ WN +IS Y Q   +D+A  LF  M  + ++P+
Sbjct: 289 LLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPD 348

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
            +T    L L +E   L  GK +H YI + G+ +DV LK+AL+D+Y KC DV  A+++F 
Sbjct: 349 SITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFD 408

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
           +    DI +  AM++GY ++G    AL  F  + +  ++ N +T   +L AC+    +T 
Sbjct: 409 QRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTL 468

Query: 496 GKSVFDKMVHGLGLVPKIEHYG-CMV-----DLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           GK +        G + K  H G C V     D+  + G LD AH+    +  + + + W 
Sbjct: 469 GKELH-------GHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISXK-DAVCWN 520

Query: 550 ALLAASKLHKNP 561
           +++ +   +  P
Sbjct: 521 SMITSCSQNGKP 532



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 209/412 (50%), Gaps = 4/412 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N +++ Y++N     A  ++  M   G + D+ T  + L   ++      GKEIH 
Sbjct: 314 LVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSITFSSFLPLLSEGATLRQGKEIHC 373

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + I+NG+  D ++ +ALI +Y +C  +  A  +FD+    D+V  + MI GY   G+   
Sbjct: 374 YIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNN 433

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           ALE+ R +    +R + V + S++   A +A + LGK +H  +++N         + +A+
Sbjct: 434 ALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGS--CYVGSAI 491

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+KCG L  A Q F  ++    V W  MI+   +  +  E + LF +M         
Sbjct: 492 MDMYAKCGKLDLAHQTFIGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDC 551

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           ++I + +  C  +  L  GK +HA+++R  F   L   +AL+DMY KC  +  A  +FD 
Sbjct: 552 VSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDM 611

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M+ K+ + WN++I+AY     +  +  LF  M    ++P+ VT + ++S C  AG ++ G
Sbjct: 612 MEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEG 671

Query: 396 -KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMW 445
             +     E+ G+   +     +VD++ + G +N A+ + +   +  D  +W
Sbjct: 672 IHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVW 723



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/306 (24%), Positives = 143/306 (46%), Gaps = 14/306 (4%)

Query: 254 NEINEGVRL-FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
           N IN G  L F+   ++++ P  ++IL     C    GL  G+  HA +L NG  ++  +
Sbjct: 27  NSINIGKPLQFSIHNDDSLAPQLVSILQ---TCTDPSGLSHGRQAHAQMLVNGIGYNGIL 83

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
              L+ MY  C     A+ +F  ++      WN +I  +      D A   +  M     
Sbjct: 84  GTKLLGMYVLCGAFLDAKNIFYQLRLWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGT 143

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR 432
            P++ T   ++  C    ++ +G+ +H  I+  G E+DV + ++L+  Y++ G ++ A  
Sbjct: 144 LPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARY 203

Query: 433 LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL 492
           LF     +D  +WN M+ GY  +G  + A   F++M R+   PN +TF  +L+ C+   +
Sbjct: 204 LFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIM 263

Query: 493 VTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL----GRAGLLDEAHEMIKSMPLRPNMIVW 548
           +      F   +HGL +   +E    + + L     + G L +A  +   MP + +++ W
Sbjct: 264 IN-----FGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMP-KTDLVTW 317

Query: 549 GALLAA 554
             +++ 
Sbjct: 318 NGMISG 323


>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Vitis vinifera]
          Length = 625

 Score =  356 bits (914), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 185/554 (33%), Positives = 325/554 (58%), Gaps = 20/554 (3%)

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           L ++ H   +  GL  ++ ++  LI  Y+ C     +R +FD + +++V  W+++I GY 
Sbjct: 41  LTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGYA 100

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           +  L  EA ++  +M   D+ P +  + ++  + +++  +  GK+IH       K  ++G
Sbjct: 101 KNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHG------KSIRIG 154

Query: 209 ----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI---RCNEINEGVR 261
                 +A +++ MY KCGN   ++++F+ +   +  SW V+I+GY     CN   E   
Sbjct: 155 FVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWE 214

Query: 262 LFAEMIEENVFPSEITILSLIIEC-GFVGGLQLGKWLHAYILRN----GFEFSLAMANAL 316
              +M  + V P   TI SL+  C G  G    G+ LH YI++N    G +  + +   L
Sbjct: 215 FVKQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKNELVLGLDSDVHLGCCL 274

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV-SKVRPN 375
           +DMY +  ++   R +FD MK ++V  W A+I+ Y +    D+A  LF  M+V   + PN
Sbjct: 275 IDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPN 334

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF- 434
            V++V +L  C+    L  G+ +H +  ++ L  +V L  AL+DMY+KCG ++ A R+F 
Sbjct: 335 RVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFE 394

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
            +++ +D   W++M++GYG+HG G+EA++ +  M ++G++P+ IT +G+L+ACS +GLV 
Sbjct: 395 DDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVN 454

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           EG +++  +++  G+ P +E + C+VD+LGRAG LD A + IK+MP+ P   VWGAL++ 
Sbjct: 455 EGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSC 514

Query: 555 SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEP 614
           S +H +  M E+A   ++++EP+N    V +SN+YA + RW+ VA VRR+MK+ R++K P
Sbjct: 515 SIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVP 574

Query: 615 GFSSVEVNGLVHKF 628
           G S + +N   H F
Sbjct: 575 GCSWISINNKTHCF 588



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 254/500 (50%), Gaps = 41/500 (8%)

Query: 9   NLEQTRQCHAHIIK----------THFKFSYTNIINPLTR--------------YNSLVT 44
           +L+ TRQ H+ I+           T   F+Y    +P                 +NSL+ 
Sbjct: 38  SLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLIN 97

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
            Y KN   + A  ++  M  +    D+FT+ T+ K  +++     GK IHG +I+ G   
Sbjct: 98  GYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVS 157

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG---LPEEALEVMR 161
           D  V+N+++ MY +CG+   +R +FDEM  R+  SW+ +I GY   G     EE  E ++
Sbjct: 158 DTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVK 217

Query: 162 EMRFMDIRPSEVAMISMVSLF-ADVADVDLGKAIHACVVRNCKDEKLG----VAIATALI 216
           +M+  ++RP    + S++ L   D    D G+ +H  +V+N  +  LG    V +   LI
Sbjct: 218 QMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKN--ELVLGLDSDVHLGCCLI 275

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM-IEENVFPSE 275
           DMYS+   +   +++F+R+   +V SWT MI+GY+   + +E + LF +M + + + P+ 
Sbjct: 276 DMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNR 335

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF-D 334
           ++++S++  C    GL  G+ +H + +R      +++ NAL+DMY KC  + SAR +F D
Sbjct: 336 VSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFED 395

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
               KD + W+++IS Y       +A  L+  M  + +RP+ +T VG+LS C+ +G +  
Sbjct: 396 DSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNE 455

Query: 395 GKWLH-TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGY 452
           G  ++ + I   G+E  + +   +VDM  + G ++ A        +     +W A+++  
Sbjct: 456 GLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCS 515

Query: 453 GMHG---CGEEALIFFVDME 469
            +HG     E A  F + +E
Sbjct: 516 IIHGDLEMQELAYRFLIQLE 535



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 135/274 (49%), Gaps = 16/274 (5%)

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
            L+L +  H+ IL  G   +  +A  L+  Y  C+    +R +FD ++ K+V +WN++I+
Sbjct: 38  SLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLIN 97

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
            YA+    ++AF+LF  M  S V P++ T+  L  + +E GAL  GK +H    + G   
Sbjct: 98  GYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVS 157

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG-CG--EEALIFFV 466
           D ++  +++ MY KCG+   + ++F E   R+   WN ++AGY + G C   EE   F  
Sbjct: 158 DTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVK 217

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG--------LGLVPKIEHYGC 518
            M+   V+P+  T   LL  C       +GK  + + +H         LGL   +    C
Sbjct: 218 QMQMDEVRPDAYTISSLLPLCDG----DKGKWDYGRELHCYIVKNELVLGLDSDVHLGCC 273

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           ++D+  R+  +     +   M  R N+  W A++
Sbjct: 274 LIDMYSRSNKVVVGRRVFDRMKCR-NVFSWTAMI 306



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 7/211 (3%)

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           +L++ +  H+ I   GL  + +L T L+  YA C     +  +F    ++++ +WN+++ 
Sbjct: 38  SLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLIN 97

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           GY  +    EA   F  M  S V P+  T   L    S  G +  GKS+  K +  +G V
Sbjct: 98  GYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIR-IGFV 156

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE----- 565
                   ++ +  + G  +E+ ++   M +R N   W  L+A   +  N +  E     
Sbjct: 157 SDTVVANSIMSMYCKCGNFEESRKVFDEMTIR-NSGSWNVLIAGYAVSGNCNFREETWEF 215

Query: 566 IAATQILEIEPQNYGYNVLMSNIYAVANRWN 596
           +   Q+ E+ P  Y  + L+        +W+
Sbjct: 216 VKQMQMDEVRPDAYTISSLLPLCDGDKGKWD 246


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  356 bits (913), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 197/619 (31%), Positives = 346/619 (55%), Gaps = 15/619 (2%)

Query: 20  IIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILK 79
           + +T  +F   ++++    +++++  +  N +   A+ ++    + G   +++    +++
Sbjct: 119 VFETMGRFGKRDVVS----WSAMMACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIR 174

Query: 80  ACAQVLMTHLGKEIHGFAIKNG-LDGDAYVSNALIQMYSEC-GSLVSARYLFDEMPNRDV 137
           AC+      +G+ I GF +K G  + D  V  +LI M+ +   S  +A  +FD+M   +V
Sbjct: 175 ACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNV 234

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
           V+W+ MI    + G P EA+    +M        +  + S+ S  A++ ++ LG+ +H+ 
Sbjct: 235 VTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSW 294

Query: 198 VVRNCKDEKLGVAIATALIDMYSKC---GNLAYAKQLFNRLNQNSVVSWTVMISGYIR-C 253
            +R+     L   +  +L+DMY+KC   G++   +++F+R+  +SV+SWT +I+GY++ C
Sbjct: 295 AIRS----GLADDVECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNC 350

Query: 254 NEINEGVRLFAEMIEE-NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
           N   E + LF+EMI + +V P+  T  S    CG V   ++GK +  +  + G   + ++
Sbjct: 351 NLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSV 410

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
           +N+++ M+ KC  +  ART F+ +  K+++ +N  +    +    + AFEL   +   ++
Sbjct: 411 SNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAEREL 470

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR 432
             +  T   LLS     G+L  G+ +H+ + K GL  +  +  AL+ MY+KCG ++ A R
Sbjct: 471 GVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASR 530

Query: 433 LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL 492
           +FS    R++  W +M+ G+  HG  E  L  F  M + GVKPN +T++ +L+ACSH GL
Sbjct: 531 VFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVAILSACSHVGL 590

Query: 493 VTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           V+EG   F+ M     + PK+EHY CMVDLL RAGLL +A E I +MP + +++VW   L
Sbjct: 591 VSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFL 650

Query: 553 AASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKK 612
            A ++H N  +G++AA +ILE +P      + +SNIYA A +W +   +RR MKE  + K
Sbjct: 651 GACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMRRKMKERNLVK 710

Query: 613 EPGFSSVEVNGLVHKFIRG 631
           E G S +EV   VHKF  G
Sbjct: 711 EGGCSWIEVGDKVHKFYVG 729



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 133/541 (24%), Positives = 258/541 (47%), Gaps = 15/541 (2%)

Query: 28  SYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNG-SEVDNFTIPTILKACAQVLM 86
           S  +I N +   + L+  ++       A++    M ++G   +D+ T  ++LK+C +   
Sbjct: 18  SPPSISNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARH 77

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM---PNRDVVSWSTM 143
             LGK +H   I+  ++ D+ + N+LI +YS+ G L  A+ +F+ M     RDVVSWS M
Sbjct: 78  FRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAM 137

Query: 144 IRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
           +  +   G   +A+++  E   M + P++    +++   ++   V +G+ I   +++   
Sbjct: 138 MACFGNNGREFDAIKLFVEFLEMGLVPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGH 197

Query: 204 DEKLGVAIATALIDMYSKCGN-LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
            E   V +  +LIDM+ K  N    A ++F+++++ +VV+WT+MI+  ++     E +R 
Sbjct: 198 FES-DVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRF 256

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F +M+       + T+ S+   C  +  L LG+ LH++ +R+G    +    +LVDMY K
Sbjct: 257 FLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADDVEC--SLVDMYAK 314

Query: 323 CR---EIRSARTLFDGMKSKDVMIWNAVISAYAQ-AHCIDKAFELFIHMKVS-KVRPNEV 377
           C     +   R +FD M+   VM W A+I+ Y Q  +   +A  LF  M     V PN  
Sbjct: 315 CSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMITQGHVEPNHF 374

Query: 378 TMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
           T       C       +GK +  +  K+GL  +  +  +++ M+ KC  +  A   F   
Sbjct: 375 TFSSAFKACGNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESL 434

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
             +++  +N  + G   +   E A     ++    +  +  TF  LL+  ++ G + +G+
Sbjct: 435 SEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSLRKGE 494

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
            +  +++  LGL         ++ +  + G +D A  +   M  R N+I W +++     
Sbjct: 495 QIHSQVLK-LGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNR-NVISWTSMITGFAK 552

Query: 558 H 558
           H
Sbjct: 553 H 553


>gi|449471512|ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 607

 Score =  356 bits (913), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 197/561 (35%), Positives = 308/561 (54%), Gaps = 4/561 (0%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF 129
           D  T P +L++C+       G+ IHG+ +K G D    V+ AL +MY EC    +A  LF
Sbjct: 9   DEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLF 68

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           D+   +D+   S++     +    E    V   M    + P      +++   A +  + 
Sbjct: 69  DKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQ 128

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
           L K +H   + +     L   + TA++ +YSK  +L  A++LF+++ +   V W +MI+ 
Sbjct: 129 LAKIVHCIAIVSKLSGDL--LVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAA 186

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
           Y R  +  E + LF  M    +     T L +I     +  +  GK  HA+ILRNG +  
Sbjct: 187 YAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQ 246

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           +++ N+L+DMY +C+ + SA  +F+ M  K V+ W+A+I  Y +      A  LF  MK 
Sbjct: 247 VSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKS 306

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
             ++ + V M+ +L      GALE  K+LH Y  K GL     L TAL+  YAKCG +  
Sbjct: 307 DGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEM 366

Query: 430 AYRLFSEAIY--RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
           A RLF E     +D+ MWN+M++ +  HG   +    +  M+ S  KP+ +TF+GLL AC
Sbjct: 367 AQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTAC 426

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
            ++GLV +GK  F +M    G  P  EHY CMV+LLGRAGL+ EA E++K+MP++P+  V
Sbjct: 427 VNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARV 486

Query: 548 WGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
           WG LL+A K+H    + E AA +++ +EP+N G  +L+SNIYA A +W+ VA +R  ++ 
Sbjct: 487 WGPLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRN 546

Query: 608 IRVKKEPGFSSVEVNGLVHKF 628
             +KK PG S +E+NG V +F
Sbjct: 547 KGLKKIPGCSWLEINGHVTEF 567



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 132/420 (31%), Positives = 221/420 (52%), Gaps = 6/420 (1%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           +SL T   +N+       ++  M       D+FT   +L+  A +    L K +H  AI 
Sbjct: 80  SSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIV 139

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
           + L GD  V+ A++ +YS+  SLV AR LFD+MP +D V W+ MI  Y R G P E LE+
Sbjct: 140 SKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLEL 199

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
            + M    IR      + ++S  A +  VD GK  HA ++RN  D +  V++  +LIDMY
Sbjct: 200 FKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQ--VSVHNSLIDMY 257

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            +C  L  A ++FN +   SV+SW+ MI GY++  +    + LF++M  + +    + ++
Sbjct: 258 CECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMI 317

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-- 337
           +++     +G L+  K+LH Y ++ G     ++  AL+  Y KC  I  A+ LF+  K  
Sbjct: 318 NILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKID 377

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK- 396
            KD+++WN++ISA+A      + F+L+  MK S  +P++VT +GLL+ C  +G +E GK 
Sbjct: 378 DKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGKE 437

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
           +     E  G +        +V++  + G ++ A  L     I  D  +W  +++   MH
Sbjct: 438 FFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACKMH 497



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 187/383 (48%), Gaps = 25/383 (6%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++ +Y +  KP+  L ++  M ++G   D FT   ++ + AQ+     GK+ H   +
Sbjct: 180 WNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHIL 239

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +NG D    V N+LI MY EC  L SA  +F+ M ++ V+SWS MI+GY + G    AL 
Sbjct: 240 RNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALS 299

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV----AIATA 214
           +  +M+   I+   V MI+++  F  +  ++  K +H   +      KLG+    ++ TA
Sbjct: 300 LFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSM------KLGLTSLPSLNTA 353

Query: 215 LIDMYSKCGNLAYAKQLF--NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           L+  Y+KCG++  A++LF   +++   ++ W  MIS +    + ++  +L+  M   N  
Sbjct: 354 LLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSK 413

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSART 331
           P ++T L L+  C   G ++ GK     +  + G + S      +V++ G+   I  A  
Sbjct: 414 PDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGE 473

Query: 332 LFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
           L   M  K D  +W  ++SA  + H   K  E F   K+  + P       LLS    A 
Sbjct: 474 LVKNMPIKPDARVWGPLLSA-CKMHPGSKLAE-FAAEKLINMEPRNAGNYILLSNIYAAA 531

Query: 391 ALEMGKW-----LHTYIEKQGLE 408
               GKW     + +++  +GL+
Sbjct: 532 ----GKWDGVAKMRSFLRNKGLK 550



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 139/287 (48%), Gaps = 2/287 (0%)

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M+ +++ P E T   ++  C     +  G+ +H Y+++ GF+    +A AL +MY +C E
Sbjct: 1   MVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIE 60

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
             +A  LFD    KD+   +++ +   Q    +  F +F  M   ++ P+  T   LL  
Sbjct: 61  FENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRF 120

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
                ++++ K +H       L  D+++ TA++ +Y+K   +  A +LF +   +D  +W
Sbjct: 121 IAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVW 180

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           N M+A Y   G   E L  F  M RSG++ +  T + ++++ +    V  GK     ++ 
Sbjct: 181 NIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILR 240

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
             G   ++  +  ++D+     +LD A ++   M  + ++I W A++
Sbjct: 241 N-GSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDK-SVISWSAMI 285



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/179 (22%), Positives = 94/179 (52%), Gaps = 2/179 (1%)

Query: 16  CHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIP 75
           C   I+ +  K         +  +++++  Y+KN +  +AL++++ M+ +G + D   + 
Sbjct: 258 CECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMI 317

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE--MP 133
            IL A   +      K +HG+++K GL     ++ AL+  Y++CGS+  A+ LF+E  + 
Sbjct: 318 NILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEKID 377

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           ++D++ W++MI  +   G   +  ++   M+  + +P +V  + +++   +   V+ GK
Sbjct: 378 DKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKGK 436



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 10/200 (5%)

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           M    + P+E T   +L  C+    +  G+ +H Y+ K G ++  ++ TAL +MY +C +
Sbjct: 1   MVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIE 60

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
              A++LF +   +D+   +++      +  GE     F  M    + P+  TF  LL  
Sbjct: 61  FENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRF 120

Query: 487 CSHAGLVTEGKSVFDKMVHGLGLVPKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLR 542
              AGL         K+VH + +V K+         ++ L  +   L +A ++   MP +
Sbjct: 121 I--AGL---NSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEK 175

Query: 543 PNMIVWGALLAASKLHKNPS 562
            + +VW  ++AA      P+
Sbjct: 176 -DRVVWNIMIAAYAREGKPT 194


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  355 bits (912), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 210/620 (33%), Positives = 342/620 (55%), Gaps = 26/620 (4%)

Query: 26  KFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVL 85
           K SY N+++     N L+   ++  +   A+ ++  M K+  E++  +   IL A  +  
Sbjct: 344 KMSYRNVVS----LNGLIIGLVRQKRGEEAVELFMEM-KDSVELNPNSYMIILTAFPEFH 398

Query: 86  MTHLGK----EIHGFAIKNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSW 140
           +   GK    E+H F I++GL +    + N LI MY++CG++  A  +F  M N+D V+W
Sbjct: 399 VLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTW 458

Query: 141 STMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR 200
           ++MI G  +     EA++  +EMR  ++ PS   MIS +S  A +  + +G+ +H     
Sbjct: 459 NSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLH----- 513

Query: 201 NCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
            C+  KLG    V+++ AL+ +Y +CG +   ++ F+ +     VSW  +I G +  +E 
Sbjct: 514 -CEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLI-GALADSEP 571

Query: 257 N--EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
           +  E V  F  M+     P+ +T ++++     +   +LGK +HA +L+       A+ N
Sbjct: 572 SMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIEN 631

Query: 315 ALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           AL+  YGKC ++     +F  M  + D + WN++IS Y     + KA ++   M     R
Sbjct: 632 ALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQR 691

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
            +  T   +LS C     LE G  +H    +  LE D+++ +ALVDMYAKCG ++ A R 
Sbjct: 692 LDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRF 751

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F     R++  WN+M++GY  HG G ++L  F  M+  G  P+ +TF+G+L+ACSHAGLV
Sbjct: 752 FEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGLV 811

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            EG S FD M    GL P++EH+ CMVDLLGR G L++  + +  MP++PN+++W  +L 
Sbjct: 812 NEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVLG 871

Query: 554 A--SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVK 611
           A      +N ++G  AA  +LE+EP N    +L+SN+YA   +W+DVA  R  M++  VK
Sbjct: 872 ACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFVK 931

Query: 612 KEPGFSSVEVNGLVHKFIRG 631
           KE G S V +   VH F+ G
Sbjct: 932 KEAGCSWVTMKDGVHVFVAG 951



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 145/532 (27%), Positives = 260/532 (48%), Gaps = 15/532 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV--LMTHLGKEI 93
           L  ++ L++ Y +N  P+ A  ++  M  +G   +++   ++++AC +        G +I
Sbjct: 139 LVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQI 198

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVS-ARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           HG   K     D   SN LI MY     +V  AR  FD +  R++VS ++MI  Y + G 
Sbjct: 199 HGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGD 258

Query: 153 PEEALEVM----REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL- 207
              A ++     +E+    ++P+E    S++S    +A+  L   +   + R  K   L 
Sbjct: 259 AVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGL-VLLEQLLTRVEKSGFLH 317

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            + + +AL+  ++K G++ YAK +F +++  +VVS   +I G +R     E V LF EM 
Sbjct: 318 DLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMK 377

Query: 268 EE-NVFP-SEITILSLIIECGFV-GGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKC 323
           +   + P S + IL+   E   +  G + G  +HA+++R+G     +A+ N L++MY KC
Sbjct: 378 DSVELNPNSYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKC 437

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
             I  A  +F  M +KD + WN++I+   Q     +A + F  M+ +++ P+  TM+  L
Sbjct: 438 GAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISAL 497

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
           S C   G + +G+ LH    K GL++DV +  AL+ +Y +CG V    + FS  +  D  
Sbjct: 498 SSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHV 557

Query: 444 MWNAMMAGYG-MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
            WN+++           EA+  F+ M R+G  PN +TFI +L A S   L   GK +   
Sbjct: 558 SWNSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQI-HA 616

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +V    +         ++   G+ G +     +   M  R + + W ++++ 
Sbjct: 617 LVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISG 668



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 158/577 (27%), Positives = 270/577 (46%), Gaps = 31/577 (5%)

Query: 12  QTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAF--------MR 63
            TR+  A+   + F F  +    P + +  L+ +   N  P S++ +           + 
Sbjct: 7   HTRRLAAYSHSSVFTFPRSASSIPHSHHYPLLFNPFTNPLPPSSIPLQVLVDLYKSSQLH 66

Query: 64  KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLV 123
            N  + D   I ++ +       +   +E+H    KNG   D ++ N LI +Y+  G L 
Sbjct: 67  HNPVQHDE-KIESLAQRYRYSCGSKDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLG 125

Query: 124 SARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFA 183
           S R +FDEMP R++VSWS +I GY R  +P EA E+ R+M      P+  A  S++    
Sbjct: 126 SGRKVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQ 185

Query: 184 DVADVDL--GKAIHACVVRNCKDEKLGVAIATALIDMYSKC-GNLAYAKQLFNRLNQNSV 240
           +  +  L  G  IH  + +        V  +  LI MY    G + YA++ F+ +   ++
Sbjct: 186 ECGEYGLKFGMQIHGLMSKTQYVND--VTASNVLISMYGNALGMVDYARRAFDSIWPRNL 243

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEE----NVFPSEITILSLI-IECGFV-GGLQLG 294
           VS   MIS Y +  +      +F+ M +E     + P+E T  SLI   C     GL L 
Sbjct: 244 VSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVLL 303

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
           + L   + ++GF   L + +ALV  + K   I  A+ +F  M  ++V+  N +I    + 
Sbjct: 304 EQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQ 363

Query: 355 HCIDKAFELFIHMKVS-KVRPNEVTMVGLLSLCTEAGALEMGKW----LHTYIEKQG-LE 408
              ++A ELF+ MK S ++ PN   ++  L+   E   LE GK     +H ++ + G L 
Sbjct: 364 KRGEEAVELFMEMKDSVELNPNSYMII--LTAFPEFHVLENGKRKGSEVHAFLIRSGLLN 421

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
             + +   L++MYAKCG +N A  +F     +D   WN+M+ G   +    EA+  F +M
Sbjct: 422 AQIAIGNGLINMYAKCGAINDACVVFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEM 481

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
            R+ + P+  T I  L++C+  G ++ G+ +  + +  LGL   +     ++ L G  G 
Sbjct: 482 RRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLK-LGLDLDVSVSNALLALYGECGY 540

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
           + E  +   S+ L  + + W +L+ A      PSM E
Sbjct: 541 VKECQKAF-SLMLDYDHVSWNSLIGALA-DSEPSMLE 575


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  355 bits (912), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 204/568 (35%), Positives = 313/568 (55%), Gaps = 12/568 (2%)

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDG-DAYVSNALIQMYSECGSLVSARYLFDEM 132
           + ++L++C +      G+ +H   + +G      +++N LI MYS C  L SA  LF  M
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           P R+ VSW+T++ G  +  +  +AL     MR   + P+  A+ S     A +     G 
Sbjct: 83  PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGA 142

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
            +H   VR   D +L VA  + L DMYSKCG L+ A ++F+++ Q   V+WT MI GY +
Sbjct: 143 QLHCVGVRLGFDTELFVA--SNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAK 200

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ---LGKWLHAYILRNGFEFS 309
              +   V  F +M  E +  ++  +   ++     GGL+   L K +H  + + GFE  
Sbjct: 201 NGSLEAAVLSFRDMKREGLVGADQHVFCSVLSAS--GGLKDGWLSKSIHCCVTKAGFELE 258

Query: 310 LAMANALVDMYGKCREIRSA-RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
           +A+ NAL+DMY K  ++ SA R L       +V+   ++I  Y +  C+++A  +++ ++
Sbjct: 259 VAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELR 318

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
              V PNE T   ++  C     LE G  LH  + K  L  D  + + LVDMY KCG ++
Sbjct: 319 RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLIS 378

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            + +LF+E  YR    WNA++  +  HG G EA+  F  M  SG++PN I F+ LL ACS
Sbjct: 379 LSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS 438

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           HAGLV EG   F  M    G+ PK EHY C++D  GRAG LDEA++ I  MP++PN   W
Sbjct: 439 HAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGW 498

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
            +LL A ++  +  +GE+AA  ++++EP N G +V +S IYA   +W DV  VR++M++ 
Sbjct: 499 CSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDS 558

Query: 609 RVKKEPGFSSVEVNGLVHKFIRGGMVNW 636
           R+KK PGFS V+ N   H F   G  +W
Sbjct: 559 RIKKLPGFSWVDSNKKTHVF---GSEDW 583



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 132/426 (30%), Positives = 225/426 (52%), Gaps = 8/426 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +LV+   +N   + AL  +A MR+ G     F + +  +A A +     G ++H   +
Sbjct: 90  WTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQLHCVGV 149

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G D + +V++ L  MYS+CG L  A  +FD+MP +D V+W+ MI GY + G  E A+ 
Sbjct: 150 RLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVL 209

Query: 159 VMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
             R+M+    +   +    S++S    + D  L K+IH CV +     +L VA+  ALID
Sbjct: 210 SFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTK--AGFELEVAVRNALID 267

Query: 218 MYSKCGNLAYAKQLFNRLNQN--SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           MY+K  ++  A ++  +++    +VVS T MI GYI  + + E + ++ E+  + V P+E
Sbjct: 268 MYAKSMDVESASRVL-KIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNE 326

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T  S+I  C     L+ G  LHA +++        + + LVDMYGKC  I  +  LF+ 
Sbjct: 327 FTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNE 386

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++ +  + WNAVI+ +AQ     +A + F  M  S +RPN +  V LL+ C+ AG ++ G
Sbjct: 387 IEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEG 446

Query: 396 -KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYG 453
            K+ ++  E  G+E      + ++D Y + G ++ AY+  SE  I  +   W +++    
Sbjct: 447 LKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACR 506

Query: 454 MHGCGE 459
           M G  E
Sbjct: 507 MRGSKE 512



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 2/215 (0%)

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTL 332
           + + + SL+  CG  G L+ G+ LHA ++ +G    S  +AN L+ MY  C ++ SA  L
Sbjct: 19  TTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRL 78

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F  M  ++ + W  ++S  +Q      A   F  M+ + V P    +          GA 
Sbjct: 79  FAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAP 138

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
             G  LH    + G + ++ + + L DMY+KCG ++ A R+F +   +D   W AM+ GY
Sbjct: 139 LPGAQLHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGY 198

Query: 453 GMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNA 486
             +G  E A++ F DM+R G V  +   F  +L+A
Sbjct: 199 AKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSA 233


>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 642

 Score =  355 bits (912), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 199/603 (33%), Positives = 329/603 (54%), Gaps = 55/603 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + SL+  Y++N +   A +++  MR+    V NFTI ++LKA A++     G+ ++GF +
Sbjct: 69  WTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVYGFVL 128

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   D  V N+++ ++  C  + +AR  FDEM  +D+VSW+ MI GY       + ++
Sbjct: 129 KYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNN----DRVD 184

Query: 159 VMREMRFMDIRPSE--VAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           + R  +F D  P    V+  SM+  +    D+   + +   +    KD    +A    ++
Sbjct: 185 IAR--KFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSM--PVKD----LASWNVMV 236

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
             Y   G+   A+ +F ++  +   SW +MISG+ +  E+      F  M  +NV     
Sbjct: 237 SGYMDIGDCVNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMPNKNV----- 291

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
                         +  G  L  YI +NG                   +   AR LFD M
Sbjct: 292 --------------ISWGIMLDGYI-KNG-------------------DTNGARCLFDQM 317

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             K+++ W+ +I  YA+     KA ELF   K   ++P+E  ++G++S C++ G ++  +
Sbjct: 318 PMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAE 377

Query: 397 -WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H Y+    L  D+ + T+L+DMYAKCG +  A ++F  A  +D+  ++ M+A    H
Sbjct: 378 SIIHNYVGPSLLS-DLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANH 436

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G G +A+  F  M+R+ +KP+ +TF+G+L AC+H GLV EG+  F +M    G+ P  +H
Sbjct: 437 GLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKH 496

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y C+VDLLGR G L+EA+ +I++MP+ P+ +VWGALLAA ++H N  + E+AA ++ +IE
Sbjct: 497 YACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIE 556

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
           P N G  +L+SNIYA A RW  VA VR  ++E RV+K  G S +E++ +VH+F+ G M +
Sbjct: 557 PDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIELSHVVHEFVMGDMSH 616

Query: 636 WKS 638
             S
Sbjct: 617 TDS 619



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 186/402 (46%), Gaps = 56/402 (13%)

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           +   L+ +YS+ G   YA ++F+ + Q +   WT +I GY+   + +E   LF +M  E 
Sbjct: 37  VINKLLRLYSRFGATDYAHKVFDEITQPNAYLWTSLIHGYVENRQYDEAFSLFIQMRREP 96

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           +     TI S++     +   + G+ ++ ++L+ GF F L + N+++D++ +CR++ +AR
Sbjct: 97  ISVLNFTISSVLKALARLTRFKGGQAVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTAR 156

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCID---KAFE------------------------- 362
             FD M  KD++ WN +IS Y     +D   K F+                         
Sbjct: 157 QAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAE 216

Query: 363 ---LFIHMKVSKVRPNEVTMVGLLSL--CTEAGAL-------EMGKW---LHTYIEKQGL 407
              LF  M V  +    V + G + +  C  A  +       + G W   +  + +   L
Sbjct: 217 AQVLFDSMPVKDLASWNVMVSGYMDIGDCVNARIIFGKMPIHDTGSWNIMISGFCKAGEL 276

Query: 408 EV-----------DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
           E            +VI    ++D Y K GD NGA  LF +   +++  W+ M+ GY  +G
Sbjct: 277 ESAKDFFDRMPNKNVISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNG 336

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
              +AL  F   +   +KP+    +G+++ACS  G++   +S+    V G  L+  +  +
Sbjct: 337 QPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYV-GPSLLSDLRVF 395

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             ++D+  + G +++A +M + M    +++ +  ++AA   H
Sbjct: 396 TSLIDMYAKCGSIEKALQMFE-MAHPKDLLCYSTMIAALANH 436



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 106/225 (47%), Gaps = 11/225 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +++++  Y +N +P  AL ++   ++   + D   I  I+ AC+Q+ +    + I  
Sbjct: 322 LVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIH 381

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +   L  D  V  +LI MY++CGS+  A  +F+    +D++ +STMI      GL  +
Sbjct: 382 NYVGPSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAALANHGLGRD 441

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA--- 212
           A+ +  +M+  +I+P  V  + +++       VD G+     +      E+ G+  +   
Sbjct: 442 AIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMT-----EEFGIQPSEKH 496

Query: 213 -TALIDMYSKCGNLAYAKQLFNRLN--QNSVVSWTVMISGYIRCN 254
              ++D+  + G L  A  L   +    +SVV   ++ +  + CN
Sbjct: 497 YACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCN 541


>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
 gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
          Length = 683

 Score =  355 bits (912), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 200/598 (33%), Positives = 319/598 (53%), Gaps = 43/598 (7%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           +I ++L +C  +     GK++H   I  G +    +   L+  YS    L  A  +    
Sbjct: 43  SISSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTI---T 99

Query: 133 PNRDVVS---WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
            N D+V+   W+ +I  Y   GL  EAL   REM    +RP      S++    +  D+D
Sbjct: 100 VNSDIVNPLPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLD 159

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
            G+ +H   +      +  + +  +L+ MY K G L  A++LFN++ +   VSW  +IS 
Sbjct: 160 FGREVHES-INAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISN 218

Query: 250 YIRCNEINEGVRLFAEM-------------------IEENVFPSEITILS---------- 280
           Y       E   LF EM                   ++   F   + +LS          
Sbjct: 219 YASRGLWKEAFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLD 278

Query: 281 ---LII---ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
              +II    C  +G ++LG  +HA  +R+ F+    + NAL+ MY +C+++R A  LF 
Sbjct: 279 PVAMIIGLGACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFK 338

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            +K+K +  WN+++S Y      ++A  LF  M  S + PN VT+  +L  C     L+ 
Sbjct: 339 SIKTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVANLQQ 398

Query: 395 GKWLHTYI-EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           GK  H YI  ++G E  ++L  +LV+MYA+ G V  A R+F     RD   + +++AGYG
Sbjct: 399 GKEFHCYIMRREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYG 458

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
           + G G+ AL  F +M +  +KP+ +T + +L+ACSH+GLVTEG  +F+KM    G+VP +
Sbjct: 459 IQGEGKTALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAV 518

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EH+ CMVDL GRAGLL++A ++I SMP RP   +W  L+ A ++H N  +GE AA ++LE
Sbjct: 519 EHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKLLE 578

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           ++P+N GY VL++N++A A RW+ +A VR  M+++ V+K PG + V+V      F+ G
Sbjct: 579 MKPENPGYYVLIANMHAAAGRWSKLAEVRTYMRDLGVRKAPGCTWVDVGSGFSPFVVG 636



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 163/515 (31%), Positives = 251/515 (48%), Gaps = 67/515 (13%)

Query: 9   NLEQTRQCHAHIIKTHFK---------------FSY----------TNIINPLTRYNSLV 43
           +L Q +Q HAH I   F+               FS           ++I+NPL  +N L+
Sbjct: 56  SLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVNPLP-WNLLI 114

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH-GFAIKNGL 102
           +SY+ N     AL+ Y  M   G   DNFT P++LKAC + L    G+E+H       G 
Sbjct: 115 SSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHESINAAYGH 174

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
             + YV N+L+ MY + G L +AR LF++MP RD VSW+ +I  Y   GL +EA E+  E
Sbjct: 175 RWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFELFEE 234

Query: 163 MRFM-----------------------------------DIRPSEVAMISMVSLFADVAD 187
           MR                                     DI    VAMI  +   + +  
Sbjct: 235 MRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGACSHIGA 294

Query: 188 VDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           + LG  IHA  +R+C D    V    ALI MYS+C +L +A  LF  +   S+ +W  M+
Sbjct: 295 IKLGTVIHASAIRSCFDGFDNV--RNALITMYSRCKDLRHADILFKSIKTKSLTTWNSML 352

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYIL-RNGF 306
           SGY   +   E   LF EM+   + P+ +TI S++  C  V  LQ GK  H YI+ R GF
Sbjct: 353 SGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHCYIMRREGF 412

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
           E  L + N+LV+MY +  ++ SA+ +FD ++ +D + + ++I+ Y        A +LF  
Sbjct: 413 EDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTALKLFDE 472

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK-QGLEVDVILKTALVDMYAKCG 425
           M   +++P++VTMV +LS C+ +G +  G  L   +    G+   V   + +VD++ + G
Sbjct: 473 MIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVDLFGRAG 532

Query: 426 DVNGAYRLFSEAIYR-DICMWNAMMAGYGMHGCGE 459
            +N A ++ +   YR    MW  ++    +HG  E
Sbjct: 533 LLNKAKKVITSMPYRPTTAMWATLVGACRIHGNTE 567


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 189/600 (31%), Positives = 326/600 (54%), Gaps = 2/600 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + + +   ++N + +  L ++  M++ G  V      ++ ++CA +      +++H  AI
Sbjct: 205 WGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAI 264

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KN    D  V  A++ +Y++  SLV AR  F  +PN  V + + M+ G  R GL  EAL+
Sbjct: 265 KNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQ 324

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + + M    I    V++  + S  A+V     G  +H   +++  D  + V +  A++D+
Sbjct: 325 LFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFD--VDVCVRNAILDL 382

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC  L  A  +F  + Q   VSW  +I+   +     + +    EM+   + P + T 
Sbjct: 383 YGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTY 442

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  L+ G  +H   +++G      +++ +VDMY KC  I  A+ L D +  
Sbjct: 443 GSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGG 502

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           ++++ WN++IS ++     ++A + F  M    V+P+  T   +L  C     +E+GK +
Sbjct: 503 QELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQI 562

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I KQ +  D  + + LVDMYAKCG++  +  +F +A   D   WNAM+ GY +HG G
Sbjct: 563 HGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQG 622

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F  M+++ V PN  TF+ +L ACSH GL+ +G   F  M     L P++EH+ C
Sbjct: 623 FEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFAC 682

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVD+LGR+    EA + I+SMPL  + ++W  LL+  K+ ++  + E AA+ +L ++P +
Sbjct: 683 MVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDD 742

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
               +L+SN+YA + +W DV+  RR+M++ R+KKEPG S +EV   +H F+ G  V+ +S
Sbjct: 743 SSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSEMHGFLAGDKVHPRS 802



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/528 (26%), Positives = 259/528 (49%), Gaps = 20/528 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L++ Y +      ++ +   M + G   D  T+  +LKAC  +    LG +IH  A+
Sbjct: 104 WNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAV 163

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+ D    +AL+ MY +C SL  A   F  M  R+ VSW   I G  +       LE
Sbjct: 164 KTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLE 223

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALI 216
           +  +M+ + +  S+ A  S+    A +  +   + +HA  ++N    D  +G    TA++
Sbjct: 224 LFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVG----TAIV 279

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           D+Y+K  +L  A++ F  L  ++V +   M+ G +R     E ++LF  M    +    +
Sbjct: 280 DVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVV 339

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           ++  +   C  V G   G  +H   +++GF+  + + NA++D+YGKC+ +  A  +F  M
Sbjct: 340 SLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEM 399

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           + +D + WNA+I+A  Q  C +        M    + P++ T   +L  C    +LE G 
Sbjct: 400 EQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGS 459

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H    K GL +D  + + +VDMY KCG +  A +L      +++  WN++++G+ ++ 
Sbjct: 460 VVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNK 519

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             EEA  FF +M   GVKP+  T+  +L+ C++   +  GK +  +++       K E  
Sbjct: 520 QSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQII-------KQEML 572

Query: 517 G------CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           G       +VD+  + G + ++  M +    + + + W A++    LH
Sbjct: 573 GDEYISSTLVDMYAKCGNMPDSLLMFEKAQ-KLDFVSWNAMICGYALH 619



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 140/538 (26%), Positives = 255/538 (47%), Gaps = 39/538 (7%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI----- 144
           G+  H   + +G     +VSN L+QMY+ CG    AR +FD MP+RD VSW+TM+     
Sbjct: 23  GQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTAYAH 82

Query: 145 --------------------------RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISM 178
                                      GY + G+  +++ +  EM    + P    +  +
Sbjct: 83  AGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTLAVL 142

Query: 179 VSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
           +     + D+ LG  IHA  V+     ++ V   +AL+DMY KC +L  A + F+ + + 
Sbjct: 143 LKACGGLEDLALGVQIHAVAVKT--GLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGER 200

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
           + VSW   I+G ++  +   G+ LF +M    +  S+    S+   C  +  L   + LH
Sbjct: 201 NSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLH 260

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
           A+ ++N F     +  A+VD+Y K   +  AR  F  + +  V   NA++    +     
Sbjct: 261 AHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGA 320

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALV 418
           +A +LF  M  S +  + V++ G+ S C E      G  +H    K G +VDV ++ A++
Sbjct: 321 EALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAIL 380

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           D+Y KC  +  AY +F E   RD   WNA++A    + C E+ + +  +M R G++P+  
Sbjct: 381 DLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDF 440

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK 537
           T+  +L AC+    +  G  V  K +  GLGL   +     +VD+  + G++ EA ++  
Sbjct: 441 TYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVS--STVVDMYCKCGMITEAQKLHD 498

Query: 538 SMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI--EPQNYGYNVLMSNIYAVAN 593
            +  +  ++ W ++++   L+K     +   +++L+I  +P ++ Y  ++     +A 
Sbjct: 499 RIGGQ-ELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLAT 555



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 224/467 (47%), Gaps = 28/467 (5%)

Query: 10  LEQTRQCHAHIIKTHF---KFSYTNIINPLTRYNSLVTS--------------------- 45
           L   RQ HAH IK  F   +   T I++   + +SLV +                     
Sbjct: 253 LSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVG 312

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
            ++    + AL ++ FM ++G   D  ++  +  ACA+V     G ++H  AIK+G D D
Sbjct: 313 LVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVD 372

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
             V NA++ +Y +C +LV A  +F EM  RD VSW+ +I    +    E+ +  + EM  
Sbjct: 373 VCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLR 432

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
             + P +    S++   A +  ++ G  +H   +++     L   +++ ++DMY KCG +
Sbjct: 433 YGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKS--GLGLDAFVSSTVVDMYCKCGMI 490

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
             A++L +R+    +VSW  +ISG+    +  E  + F+EM++  V P   T  +++  C
Sbjct: 491 TEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTC 550

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
             +  ++LGK +H  I++        +++ LVDMY KC  +  +  +F+  +  D + WN
Sbjct: 551 ANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWN 610

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEK 404
           A+I  YA      +A E+F  M+ + V PN  T V +L  C+  G L+ G ++ +    +
Sbjct: 611 AMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSR 670

Query: 405 QGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMA 450
             LE  +     +VD+  +      A +   S  +  D  +W  +++
Sbjct: 671 YKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLS 717



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/281 (25%), Positives = 117/281 (41%), Gaps = 32/281 (11%)

Query: 291 LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
           L  G+  HA +L +GF  +  ++N L+ MY +C     AR +FD M  +D + WN +++A
Sbjct: 20  LATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTA 79

Query: 351 YAQAHCIDKAFELF-------------------------------IHMKVSKVRPNEVTM 379
           YA A     A  LF                               + M    V P+  T+
Sbjct: 80  YAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTTL 139

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
             LL  C     L +G  +H    K GLE+DV   +ALVDMY KC  +  A R F     
Sbjct: 140 AVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGE 199

Query: 440 RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           R+   W A +AG   +      L  FV M+R G+  +   +  +  +C+    ++  + +
Sbjct: 200 RNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQL 259

Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
               +       ++     +VD+  +A  L +A     S+P
Sbjct: 260 HAHAIKNKFSADRVVGTA-IVDVYAKADSLVDARRAFFSLP 299



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 79/209 (37%), Gaps = 35/209 (16%)

Query: 378 TMVGLLSLCTEAG--ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC----------- 424
           T   L  LC  AG  AL  G+  H  +   G      +   L+ MYA+C           
Sbjct: 4   TFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFD 63

Query: 425 --------------------GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIF 464
                               GD   A  LF      D+  WNA+++GY   G   +++  
Sbjct: 64  VMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGL 123

Query: 465 FVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLG 524
            V+M R GV P+  T   LL AC     +  G  +    V   GL   +     +VD+ G
Sbjct: 124 SVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVK-TGLEMDVRAGSALVDMYG 182

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           +   L++A      M  R N + WGA +A
Sbjct: 183 KCRSLEDALRFFHGMGER-NSVSWGAAIA 210


>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Vitis vinifera]
          Length = 748

 Score =  355 bits (912), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 198/592 (33%), Positives = 315/592 (53%), Gaps = 38/592 (6%)

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           I ++L +C  V     G+++HG  I  G +    +   L+  YS    LV A  + +   
Sbjct: 103 ISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSN 162

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
                 W+ +I  Y R G  ++AL   ++M    IRP      S++    +  D+  GK 
Sbjct: 163 ILHPFPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKE 222

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           +H  +  N    K  + +  ALI MY KCG +  A+ LF+++ +   VSW  MIS Y   
Sbjct: 223 VHESI--NASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASM 280

Query: 254 NEINEGVRLFAEMIEENV-------------------FPSEITILSLIIECG-------- 286
              NE   LF  M  E++                   +   + +LS + +CG        
Sbjct: 281 GMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVAL 340

Query: 287 --------FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
                    +G  +LGK +H++ +R+ F     + NAL+ MY +C++++ A  LF  M++
Sbjct: 341 IIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEA 400

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K ++ WN++IS        ++A  L   M +  + PN VT+  +L LC     L+ GK  
Sbjct: 401 KSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEF 460

Query: 399 HTYI-EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           H Y+  ++  +  ++L  ALVDMYA+ G V  A R+F     RD   + +M+AGYGM G 
Sbjct: 461 HCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGE 520

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G+ AL  F +M    +KP+ IT I +L+ACSH+GLVT+G+ +F+KM    GL P +EH+ 
Sbjct: 521 GQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFA 580

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CM DL GRAGLL++A E+I++MP +P   +W  L+ A ++H+N  +GE AA ++LE++P+
Sbjct: 581 CMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPE 640

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           N GY VL++N+YA A  WN +A VR  M+++ V+K PG + V+V      F+
Sbjct: 641 NPGYYVLIANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAWVDVGTGFSPFL 692



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 145/474 (30%), Positives = 232/474 (48%), Gaps = 41/474 (8%)

Query: 20  IIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILK 79
           ++  H     +NI++P   +N L++SY++N     AL+ Y  M K G   DNFT P++LK
Sbjct: 151 LVDAHVITENSNILHPFP-WNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLK 209

Query: 80  ACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVS 139
           AC + L    GKE+H     + +     V NALI MY +CG +  AR LFD++P RD VS
Sbjct: 210 ACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVS 269

Query: 140 WSTMIR-----------------------------------GYHRGGLPEEALEVMREMR 164
           W++MI                                    GY R G  + ALE++ +MR
Sbjct: 270 WNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMR 329

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
                   VA+I  +   + + D  LGK IH+  +R+C  E     +  ALI MYS+C +
Sbjct: 330 KCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEV--DTVKNALITMYSRCKD 387

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           L +A  LF  +   S+++W  +ISG    +   E   L  EM+   + P+ +TI S++  
Sbjct: 388 LKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPL 447

Query: 285 CGFVGGLQLGKWLHAYIL-RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
           C  V  LQ GK  H Y+  R  F+  L + NALVDMY +  ++  AR +FD +  +D M 
Sbjct: 448 CARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMT 507

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           + ++I+ Y        A +LF  M   +++P+ +TM+ +LS C+ +G +  G+ L   + 
Sbjct: 508 YTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMR 567

Query: 404 K-QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI-CMWNAMMAGYGMH 455
              GL   +     + D++ + G +N A  +     Y+    MW  ++    +H
Sbjct: 568 SLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIH 621


>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
          Length = 1068

 Score =  355 bits (911), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 211/591 (35%), Positives = 332/591 (56%), Gaps = 7/591 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + ++++ Y KN  P  AL +YA M  +    D+ TI + L ACA +    +G ++H  A 
Sbjct: 367 WTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHELAQ 426

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G      V+NAL++MY++   +  A  +F  M  +DVVSWS+MI G+       +AL 
Sbjct: 427 NKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALY 486

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             R M    ++P+ V  I+ +S  A    +  GK IHA V+R C     G  +  AL+D+
Sbjct: 487 YFRYM-LGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLR-CGIGSEGY-VPNALLDL 543

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCG  +YA   F+  ++  VVSW +M+SG++     +  + LF +M+  ++    +  
Sbjct: 544 YVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSL--GRMGA 601

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +  C  +G L +G  LH      GF   + +ANAL++MY K + I  A  +F  M  
Sbjct: 602 CSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAE 661

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KDV+ W+++I+ +   H    A   F +M +  V+PN VT +  LS C   GAL  GK +
Sbjct: 662 KDVVSWSSMIAGFCFNHRSFDALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGKEI 720

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H Y+ + G+  +  +  AL+D+Y KCG  + A+  FS    +D+  WN M++G+  HG G
Sbjct: 721 HAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLG 780

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           + AL  F  M   G  P+ +TF+ L+ ACS AG+V +G  +F +      +VP ++HY C
Sbjct: 781 DIALSLFNQMVEMGEHPDEVTFV-LMCACSRAGMVIQGWELFHRRTEKFSIVPNLKHYAC 839

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLL R G L EA+ +I  MP++P+  VWGALL   ++H++  +GE+AA  ILE+EP +
Sbjct: 840 MVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPND 899

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
             Y+VL+ ++Y  A +W  VA VR+ M+E  ++++ G S VEV G+ H F+
Sbjct: 900 VAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFL 950



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/430 (32%), Positives = 229/430 (53%), Gaps = 3/430 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N +V  Y K      AL++Y  M   G   D +T P +L+ C  +    +G+E+H   +
Sbjct: 165 WNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVL 224

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G   +  V NAL+ MY++CG +V+AR +FD M   D +SW+ MI G+      E  LE
Sbjct: 225 RFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHECEAGLE 284

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M   +++P+ + + S+      +++V   K +H   V+  +   + VA   +LI M
Sbjct: 285 LFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVK--RGFAIDVAFCNSLIQM 342

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+  G +  A ++F+R+     +SWT MISGY +    ++ + ++A M   NV P ++TI
Sbjct: 343 YTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDDVTI 402

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +  C  +G L +G  LH      GF   + +ANAL++MY K + I  A  +F  M  
Sbjct: 403 ASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAE 462

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KDV+ W+++I+ +   H    A   F +M +  V+PN VT +  LS C   GAL  GK +
Sbjct: 463 KDVVSWSSMIAGFCFNHRSFDALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGKEI 521

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H Y+ + G+  +  +  AL+D+Y KCG  + A+  FS    +D+  WN M++G+  HG G
Sbjct: 522 HAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLG 581

Query: 459 EEALIFFVDM 468
           + AL  F  M
Sbjct: 582 DIALSLFNQM 591



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/423 (31%), Positives = 225/423 (53%), Gaps = 18/423 (4%)

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
           ++ACA+    H       F ++ G        NA++ M    G +  A  +F +MP RDV
Sbjct: 116 MRACARADAEH-----PSFGLRLG--------NAMLSMLVRFGEIWHAWRVFAKMPERDV 162

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
            SW+ M+ GY + G  EEAL++   M +  +RP       ++     + D  +G+ +HA 
Sbjct: 163 FSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAH 222

Query: 198 VVR-NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
           V+R    DE   V +  AL+ MY+KCG++  A+++F+ +     +SW  MI+G+   +E 
Sbjct: 223 VLRFGFGDE---VDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFENHEC 279

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
             G+ LF  M+E  V P+ +TI S+ +  G +  +   K +H + ++ GF   +A  N+L
Sbjct: 280 EAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSL 339

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           + MY     +  A  +F  M++KD M W A+IS Y +    DKA E++  M++  V P++
Sbjct: 340 IQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVNPDD 399

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           VT+   L+ C   G L++G  LH   + +G    V++  AL++MYAK   ++ A  +F  
Sbjct: 400 VTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKF 459

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
              +D+  W++M+AG+  +    +AL +F  M    VKPN +TFI  L+AC+  G +  G
Sbjct: 460 MAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSG 518

Query: 497 KSV 499
           K +
Sbjct: 519 KEI 521



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 263/524 (50%), Gaps = 32/524 (6%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLT----------------------- 37
           ++   G  +    R+ HAH+++  F     +++N L                        
Sbjct: 204 LRTCGGIPDWRMGREVHAHVLRFGFG-DEVDVLNALVTMYAKCGDIVAARKVFDGMAMTD 262

Query: 38  --RYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
              +N+++  + +N++  + L ++  M +N  + +  TI ++  A   +      KE+HG
Sbjct: 263 CISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHG 322

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           FA+K G   D    N+LIQMY+  G +  A  +F  M  +D +SW+ MI GY + G P++
Sbjct: 323 FAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDK 382

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           ALEV   M   ++ P +V + S ++  A +  +D+G  +H  + +N K     V +A AL
Sbjct: 383 ALEVYALMELHNVNPDDVTIASALAACACLGRLDVGIKLHE-LAQN-KGFIRYVVVANAL 440

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           ++MY+K  ++  A ++F  + +  VVSW+ MI+G+   +   + +  F  M+  +V P+ 
Sbjct: 441 LEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYML-GHVKPNS 499

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T ++ +  C   G L+ GK +HAY+LR G      + NAL+D+Y KC +   A   F  
Sbjct: 500 VTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSV 559

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
              KDV+ WN ++S +      D A  LF  M  + +    +     L+ C   G L++G
Sbjct: 560 HSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMMYTSL--GRMGACSALAACACLGRLDVG 617

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             LH   + +G    V++  AL++MYAK   ++ A  +F     +D+  W++M+AG+  +
Sbjct: 618 IKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFN 677

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
               +AL +F  M    VKPN +TFI  L+AC+  G +  GK +
Sbjct: 678 HRSFDALYYFRYM-LGHVKPNSVTFIAALSACAATGALRSGKEI 720



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 199/384 (51%), Gaps = 4/384 (1%)

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           P E A +++  L      VD G  + AC   + +    G+ +  A++ M  + G + +A 
Sbjct: 94  PDEGAYVALFRLCEWRRAVDAG--MRACARADAEHPSFGLRLGNAMLSMLVRFGEIWHAW 151

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           ++F ++ +  V SW VM+ GY +   + E + L+  M+   + P   T   ++  CG + 
Sbjct: 152 RVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIP 211

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
             ++G+ +HA++LR GF   + + NALV MY KC +I +AR +FDGM   D + WNA+I+
Sbjct: 212 DWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIA 271

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
            + + H  +   ELF+ M  ++V+PN +T+  +         +   K +H +  K+G  +
Sbjct: 272 GHFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAI 331

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           DV    +L+ MY   G +  A ++FS    +D   W AM++GY  +G  ++AL  +  ME
Sbjct: 332 DVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALME 391

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
              V P+ +T    L AC+  G +  G  + + +    G +  +     ++++  ++  +
Sbjct: 392 LHNVNPDDVTIASALAACACLGRLDVGIKLHE-LAQNKGFIRYVVVANALLEMYAKSKHI 450

Query: 530 DEAHEMIKSMPLRPNMIVWGALLA 553
           D+A E+ K M  + +++ W +++A
Sbjct: 451 DKAIEVFKFMAEK-DVVSWSSMIA 473


>gi|224101423|ref|XP_002312273.1| predicted protein [Populus trichocarpa]
 gi|222852093|gb|EEE89640.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  355 bits (911), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 194/592 (32%), Positives = 331/592 (55%), Gaps = 13/592 (2%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  ++S+++SY+   + + AL ++  +     ++D   + ++ +AC+++ +  L K 
Sbjct: 162 VRDLVSWSSIISSYVDKGEANEALEMFRLLVNERVKLDWVIMLSVTEACSKLGILKLAKS 221

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IHG+ ++  +D    + N+LI+MYS C  L SA  +F  M N+  +SW++MI  Y+R G 
Sbjct: 222 IHGYIVRRRVDTCEALDNSLIEMYSSCDDLYSAERIFVNMANKTFISWTSMIYCYNRSGW 281

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR---NCKDEKLGV 209
            +EA E+  +M  + + P+ + ++ ++   + ++ +  GK IH   ++     +D+ LG 
Sbjct: 282 FKEAFEIFVKMLELKVEPNVITIMGVLKSCSGLSWLREGKLIHCYALKKGMTFQDDCLG- 340

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
                LI++Y+ CG L Y +++   + + +VVSW  ++S   R     E + LF +M + 
Sbjct: 341 ---PVLIELYAGCGKLGYCEKVLLAIGERNVVSWNTLLSINARQGLFEEALVLFVQMQKR 397

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF--EFSLAMANALVDMYGKCREIR 327
            +     ++ S I  CG VG LQLG+ +H Y ++     EF   + NAL+ MY +C    
Sbjct: 398 GLMLDFFSLSSAISACGNVGSLQLGRQIHGYAIKRCILGEF---VKNALIGMYSRCGFSD 454

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           SA  +F+ +K K  + WN++IS + Q+    +A  L   M ++ ++  +V  +  +  C 
Sbjct: 455 SAYMIFNDIKQKSSVAWNSIISGFVQSGNSIEAIHLVDQMYLNCLKITDVVFLSAIQACA 514

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
           +   LE GKWLH  +   G+E D+ ++TAL DMYAKCGD+  A  +F     + +  W+A
Sbjct: 515 DMVCLEKGKWLHHKLIMYGVEKDLYIETALTDMYAKCGDLRTAEGVFHSMSEKSVVSWSA 574

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           M++GYGMHG  + A+ FF  M   G+KPN ITF+ +L+ACSH+G V +GK  FD M    
Sbjct: 575 MISGYGMHGRIDAAITFFNQMVELGIKPNHITFMNILSACSHSGSVEQGKFYFDLM-RDF 633

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
           G+ P  EH+ C+VDLL RAG ++ A+++I SMP   +  V G LL   ++H+   M    
Sbjct: 634 GVEPSSEHFACLVDLLSRAGDVNGAYKIINSMPFPADASVLGNLLNGCRIHQRMDMIPEI 693

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
              +L+I   + G+  L+SNIYA    W      R +M+    KK PG+S++
Sbjct: 694 EKDLLKIRTSDTGHYSLLSNIYAEIGNWAARENTRGIMERSGYKKVPGYSAI 745



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 154/590 (26%), Positives = 299/590 (50%), Gaps = 17/590 (2%)

Query: 9   NLEQTRQCHAHIIKTHFKFS--------YTNIINPLT-RYNSLVTSYIKNNKPSSALNIY 59
           NL  T Q    +I+++ +          +    NP +  +  L+  ++ ++    A+ +Y
Sbjct: 28  NLSNTAQASTKLIESYAQMGSIKSSTLVFETYQNPDSFMWGVLIKCHVWSHAFEEAILLY 87

Query: 60  AFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSEC 119
             M  N +++ +F  P++L+ACA      +G ++HG  IK G D D ++  +L+ +Y E 
Sbjct: 88  DKMLCNEAQITSFVFPSVLRACAGFGDMFIGAKVHGRIIKCGFDNDPFIETSLLGLYGEL 147

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV 179
           G L  AR +FD++P RD+VSWS++I  Y   G   EALE+ R +    ++   V M+S+ 
Sbjct: 148 GCLTDARKVFDDIPVRDLVSWSSIISSYVDKGEANEALEMFRLLVNERVKLDWVIMLSVT 207

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
              + +  + L K+IH  +VR   D     A+  +LI+MYS C +L  A+++F  +   +
Sbjct: 208 EACSKLGILKLAKSIHGYIVRRRVDT--CEALDNSLIEMYSSCDDLYSAERIFVNMANKT 265

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
            +SWT MI  Y R     E   +F +M+E  V P+ ITI+ ++  C  +  L+ GK +H 
Sbjct: 266 FISWTSMIYCYNRSGWFKEAFEIFVKMLELKVEPNVITIMGVLKSCSGLSWLREGKLIHC 325

Query: 300 YILRNGFEFS-LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
           Y L+ G  F    +   L+++Y  C ++     +   +  ++V+ WN ++S  A+    +
Sbjct: 326 YALKKGMTFQDDCLGPVLIELYAGCGKLGYCEKVLLAIGERNVVSWNTLLSINARQGLFE 385

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALV 418
           +A  LF+ M+   +  +  ++   +S C   G+L++G+ +H Y  K+ + +   +K AL+
Sbjct: 386 EALVLFVQMQKRGLMLDFFSLSSAISACGNVGSLQLGRQIHGYAIKRCI-LGEFVKNALI 444

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
            MY++CG  + AY +F++   +    WN++++G+   G   EA+     M  + +K   +
Sbjct: 445 GMYSRCGFSDSAYMIFNDIKQKSSVAWNSIISGFVQSGNSIEAIHLVDQMYLNCLKITDV 504

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
            F+  + AC+    + +GK +  K++   G+   +     + D+  + G L  A  +  S
Sbjct: 505 VFLSAIQACADMVCLEKGKWLHHKLIM-YGVEKDLYIETALTDMYAKCGDLRTAEGVFHS 563

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMS 586
           M    +++ W A+++   +H           Q++E  I+P +  +  ++S
Sbjct: 564 MS-EKSVVSWSAMISGYGMHGRIDAAITFFNQMVELGIKPNHITFMNILS 612



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 234/464 (50%), Gaps = 6/464 (1%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           ++H       L   A  S  LI+ Y++ GS+ S+  +F+   N D   W  +I+ +    
Sbjct: 19  QLHAHLSVTNLSNTAQASTKLIESYAQMGSIKSSTLVFETYQNPDSFMWGVLIKCHVWSH 78

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
             EEA+ +  +M   + + +     S++   A   D+ +G  +H  +++   D      I
Sbjct: 79  AFEEAILLYDKMLCNEAQITSFVFPSVLRACAGFGDMFIGAKVHGRIIKCGFDND--PFI 136

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
            T+L+ +Y + G L  A+++F+ +    +VSW+ +IS Y+   E NE + +F  ++ E V
Sbjct: 137 ETSLLGLYGELGCLTDARKVFDDIPVRDLVSWSSIISSYVDKGEANEALEMFRLLVNERV 196

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
               + +LS+   C  +G L+L K +H YI+R   +   A+ N+L++MY  C ++ SA  
Sbjct: 197 KLDWVIMLSVTEACSKLGILKLAKSIHGYIVRRRVDTCEALDNSLIEMYSSCDDLYSAER 256

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +F  M +K  + W ++I  Y ++    +AFE+F+ M   KV PN +T++G+L  C+    
Sbjct: 257 IFVNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKMLELKVEPNVITIMGVLKSCSGLSW 316

Query: 392 LEMGKWLHTYIEKQGLEV-DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           L  GK +H Y  K+G+   D  L   L+++YA CG +    ++      R++  WN +++
Sbjct: 317 LREGKLIHCYALKKGMTFQDDCLGPVLIELYAGCGKLGYCEKVLLAIGERNVVSWNTLLS 376

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
                G  EEAL+ FV M++ G+  +  +    ++AC + G +  G+ +    +    L 
Sbjct: 377 INARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACGNVGSLQLGRQIHGYAIKRCILG 436

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
             +++   ++ +  R G  D A+ +   +  + + + W ++++ 
Sbjct: 437 EFVKN--ALIGMYSRCGFSDSAYMIFNDIKQKSS-VAWNSIISG 477



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 92/383 (24%), Positives = 190/383 (49%), Gaps = 11/383 (2%)

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
           +T LI+ Y++ G++  +  +F          W V+I  ++  +   E + L+ +M+    
Sbjct: 36  STKLIESYAQMGSIKSSTLVFETYQNPDSFMWGVLIKCHVWSHAFEEAILLYDKMLCNEA 95

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
             +     S++  C   G + +G  +H  I++ GF+    +  +L+ +YG+   +  AR 
Sbjct: 96  QITSFVFPSVLRACAGFGDMFIGAKVHGRIIKCGFDNDPFIETSLLGLYGELGCLTDARK 155

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +FD +  +D++ W+++IS+Y      ++A E+F  +   +V+ + V M+ +   C++ G 
Sbjct: 156 VFDDIPVRDLVSWSSIISSYVDKGEANEALEMFRLLVNERVKLDWVIMLSVTEACSKLGI 215

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L++ K +H YI ++ ++    L  +L++MY+ C D+  A R+F     +    W +M+  
Sbjct: 216 LKLAKSIHGYIVRRRVDTCEALDNSLIEMYSSCDDLYSAERIFVNMANKTFISWTSMIYC 275

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           Y   G  +EA   FV M    V+PN IT +G+L +CS    + EGK +    +   G+  
Sbjct: 276 YNRSGWFKEAFEIFVKMLELKVEPNVITIMGVLKSCSGLSWLREGKLIHCYALKK-GMTF 334

Query: 512 KIEHYG-CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           + +  G  +++L    G L    +++ ++  R N++ W  LL+      N   G      
Sbjct: 335 QDDCLGPVLIELYAGCGKLGYCEKVLLAIGER-NVVSWNTLLSI-----NARQGLFEEAL 388

Query: 571 ILEIEPQNYGYNVLMSNIYAVAN 593
           +L ++ Q  G   LM + +++++
Sbjct: 389 VLFVQMQKRG---LMLDFFSLSS 408


>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 730

 Score =  355 bits (911), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 199/576 (34%), Positives = 310/576 (53%), Gaps = 38/576 (6%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           GK++H   I  G +    +   L+  Y+    L  A  + +       + W+ +I  Y R
Sbjct: 112 GKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLISSYVR 171

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
            GL  EAL   ++M    IRP +    S++    +  D+  GK +HA +  +C    L V
Sbjct: 172 NGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFV 231

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM--- 266
               +L+ MY+K G L+ A+ LF  + +   VSW  MISGY       E   LF +M   
Sbjct: 232 --HNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVE 289

Query: 267 -IEENV---------------FPSEITILS-------------LII---ECGFVGGLQLG 294
            IE N+               F   + +LS              II    C  +G ++LG
Sbjct: 290 GIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLG 349

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
           + +H   +R+ ++    + NAL+ MY +C+ +R A  LF   ++K+++ WN+++S Y   
Sbjct: 350 REIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHM 409

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI-EKQGLEVDVIL 413
              ++A  LF  M +S + PN VT+  +L LC     L+ GK  H YI  + G +  ++L
Sbjct: 410 DRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLL 469

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
             +LVDMYA+ G V  A RLF     RD   + +++AGYG+ G G EAL  F +M++  +
Sbjct: 470 WNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHI 529

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
           KP+ +T + +L+ACSH+GLVTEG  +F+ M    G++P++EH+ CMVDL GRAGLL +A 
Sbjct: 530 KPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLHKAK 589

Query: 534 EMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVAN 593
           EMI  MP RP+  +W  LL A ++H N  +GE AA ++LE+ P+N GY VL++N+YA A 
Sbjct: 590 EMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIANMYAAAG 649

Query: 594 RWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            W+ +A VR  M+++ V+K PG + V+V      F+
Sbjct: 650 CWSKLAKVRTYMRDLGVRKAPGCAWVDVGSGFFPFL 685



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/469 (31%), Positives = 234/469 (49%), Gaps = 43/469 (9%)

Query: 30  TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL 89
           +NI++PL  +N L++SY++N     AL+ Y  M   G   D FT P++LKAC + L    
Sbjct: 154 SNILHPLP-WNLLISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAF 212

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           GK++H     + L  + +V N+L+ MY++ G L +AR LF+ M  RD VSW+TMI GY  
Sbjct: 213 GKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYAS 272

Query: 150 GGL-----------------------------------PEEALEVMREMRFMDIRPSEVA 174
            G+                                    EEALE++  MR   I    VA
Sbjct: 273 KGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVA 332

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA-IATALIDMYSKCGNLAYAKQLFN 233
            I  +   + +  + LG+ IH   +R+  D   GV  +  ALI MYS+C  L +A  LF 
Sbjct: 333 TIIGLGACSHIGAIKLGREIHGSAIRSFYD---GVDNVKNALITMYSRCKYLRHAYNLFQ 389

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL 293
                ++++W  M+SGY   +   E   LF EM+   + P+ +TI S++  C  V  LQ 
Sbjct: 390 STRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQH 449

Query: 294 GKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
           GK  H YILR  GF+  L + N+LVDMY +  ++  A+ LFD +  +D + + ++I+ Y 
Sbjct: 450 GKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYG 509

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDV 411
                 +A +LF  MK   ++P+ VTMV +LS C+ +G +  G K         G+   +
Sbjct: 510 IQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRL 569

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHGCGE 459
                +VD++ + G ++ A  + +   YR    MW  ++    +HG  E
Sbjct: 570 EHFACMVDLFGRAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAE 618



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 185/406 (45%), Gaps = 38/406 (9%)

Query: 184 DVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSW 243
           ++  +  GK +H  ++    ++     I   L+  Y+    LA A  +    N    + W
Sbjct: 105 NLKSLSQGKQLHTLIISLGFEQH--PIIVPKLVTFYTNFDLLADAHTITENSNILHPLPW 162

Query: 244 TVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
            ++IS Y+R     E +  + +M  + + P + T  S++  CG    +  GK LHA I  
Sbjct: 163 NLLISSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINA 222

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
           +   ++L + N+LV MY K  E+ +AR LF+ M  +D + WN +IS YA      +AFEL
Sbjct: 223 SCLGWNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFEL 282

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI----------- 412
           F  M+V  +  N +T   +   C ++G  E    L +++   G+++D +           
Sbjct: 283 FGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSH 342

Query: 413 ------------------------LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
                                   +K AL+ MY++C  +  AY LF     ++I  WN+M
Sbjct: 343 IGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSM 402

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           ++GY      EEA   F +M  SG++PN +T   +L  C+    +  GK     ++   G
Sbjct: 403 LSGYTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAG 462

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
               +  +  +VD+  R+G + EA  +  S+  R + + + +L+A 
Sbjct: 463 FKDYLLLWNSLVDMYARSGKVLEAKRLFDSIS-RRDEVTYTSLIAG 507



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 175/361 (48%), Gaps = 38/361 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++    +++     AL + + MR  G ++D+      L AC+ +    LG+EIHG AI
Sbjct: 298 WNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAI 357

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++  DG   V NALI MYS C  L  A  LF     +++++W++M+ GY      EEA  
Sbjct: 358 RSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGYTHMDRSEEASF 417

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC--KDEKLGVAIATALI 216
           + REM    I P+ V + S++ L A VA++  GK  H  ++R    KD  L   +  +L+
Sbjct: 418 LFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLL---LWNSLV 474

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           DMY++ G +  AK+LF+ +++   V++T +I+GY    E  E ++LF EM + ++ P  +
Sbjct: 475 DMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHV 534

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T+++++  C            H+ ++  G +    M +A    YG    +     + D  
Sbjct: 535 TMVAVLSACS-----------HSGLVTEGIKLFELMPSA----YGIIPRLEHFACMVD-- 577

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
                         + +A  + KA E+   M     RP+      LL  C   G  E+G+
Sbjct: 578 -------------LFGRAGLLHKAKEMITRM---PYRPSSAMWATLLGACRIHGNAEIGE 621

Query: 397 W 397
           W
Sbjct: 622 W 622


>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
 gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  355 bits (911), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 197/567 (34%), Positives = 308/567 (54%), Gaps = 44/567 (7%)

Query: 67  SEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYS--ECGSLVS 124
           S++   TI  +L   +   + HL K++H  A++ G   D YVS  L++ Y+     +L  
Sbjct: 24  SQLSQKTILDLLNTKSSTSLHHL-KQVHAVALRTGHFQDHYVSGTLVKCYANPHFSNLNF 82

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           A  +F+ +PN +V  ++ +I+G  +   P +A+    +M     RP++    ++      
Sbjct: 83  ALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTA 142

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
               + G  +HA V++  +     V I +A I MY   G +  A+++      + V+ + 
Sbjct: 143 AEAAEEGVQVHAHVIK--QGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFN 200

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
            MI GY++C E+     LF  M ++NV                      G W        
Sbjct: 201 AMIDGYLKCGEVEAAKELFWSMEDKNV----------------------GSW-------- 230

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
                    N +V    KC  I  AR LF+ MK K+ + W+A+I  Y +     +A E+F
Sbjct: 231 ---------NVMVSGMAKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVF 281

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC 424
             M+  ++RP +  +  +L+ C   GAL+ G+W+H Y+       D +L TALVDMYAKC
Sbjct: 282 NVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKC 341

Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
           G ++ A+ +F +   +++  WNAM+ G GMHG  E+A+  F  M++   +PNGIT +G+L
Sbjct: 342 GRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVL 401

Query: 485 NACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
           +AC+H+G+V EG  +F+ M    G+ P +EHYGC+VDLLGRAGLL EA E++ SMP+ P+
Sbjct: 402 SACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPS 461

Query: 545 MIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRV 604
             VWGALL A + H +  +GE     +LE+EPQN G   L+SNIYA A RW+DVA VR++
Sbjct: 462 AAVWGALLGACRKHGDVELGERVGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKL 521

Query: 605 MKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           MKE  VK   G S ++ +G+VH+F  G
Sbjct: 522 MKERGVKTSTGISMIDFDGVVHEFKMG 548



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 177/404 (43%), Gaps = 70/404 (17%)

Query: 15  QCHAHIIKTHFKFS---YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVD 70
           +C+A+   ++  F+   +  + NP +  +N ++   ++NN+P  A+  Y  M    +  +
Sbjct: 70  KCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPN 129

Query: 71  NFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYS------------- 117
            FT PT+ KAC        G ++H   IK GL GD ++ +A IQMY              
Sbjct: 130 KFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLG 189

Query: 118 ------------------ECGSLVSARYLFDEMPNRDVVSW------------------- 140
                             +CG + +A+ LF  M +++V SW                   
Sbjct: 190 EDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEAREL 249

Query: 141 ------------STMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV 188
                       S MI GY +GG  +EALEV   M+  +IRP +  + S+++  A++  +
Sbjct: 250 FNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGAL 309

Query: 189 DLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
           D G+ IHA V  N         + TAL+DMY+KCG L  A  +F ++ +  V +W  MI 
Sbjct: 310 DQGRWIHAYVNNN--SNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMIC 367

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG-KWLHAYILRNGFE 307
           G        + + LF +M ++   P+ IT+L ++  C   G +  G +  ++     G E
Sbjct: 368 GLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIE 427

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
             +     +VD+ G+   +  A  +   M       +W A++ A
Sbjct: 428 PGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGA 471



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 134/294 (45%), Gaps = 18/294 (6%)

Query: 269 ENVFPSEI---TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR- 324
           EN F S++   TIL L+        L   K +HA  LR G      ++  LV  Y     
Sbjct: 19  ENKFTSQLSQKTILDLL-NTKSSTSLHHLKQVHAVALRTGHFQDHYVSGTLVKCYANPHF 77

Query: 325 -EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
             +  A  +F+ + + +V ++N +I    Q +   KA   +  M ++  RPN+ T   L 
Sbjct: 78  SNLNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLF 137

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
             CT A A E G  +H ++ KQGL  DV +++A + MY   G+V GA R+  E    D+ 
Sbjct: 138 KACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVI 197

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            +NAM+ GY   G  E A   F  ME   V    +   G+    +  G++ E + +F++M
Sbjct: 198 CFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGM----AKCGMIEEARELFNEM 253

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM---PLRPNMIVWGALLAA 554
                +      +  M+D   + G   EA E+   M    +RP   V  ++LAA
Sbjct: 254 KEKNEI-----SWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAA 302



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 114/235 (48%), Gaps = 10/235 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +++++  YIK      AL ++  M++       F + ++L ACA +     G+ IH +  
Sbjct: 261 WSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVN 320

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            N    DA +  AL+ MY++CG L  A  +F++M  ++V +W+ MI G    G  E+A+E
Sbjct: 321 NNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIE 380

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT----A 214
           +  +M+    RP+ + ++ ++S  A    VD G  I      N  +E  G+         
Sbjct: 381 LFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIF-----NSMEEVYGIEPGMEHYGC 435

Query: 215 LIDMYSKCGNLAYAKQ-LFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           ++D+  + G L  A++ +++   + S   W  ++    +  ++  G R+   ++E
Sbjct: 436 VVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLE 490


>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 717

 Score =  355 bits (910), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 192/595 (32%), Positives = 332/595 (55%), Gaps = 11/595 (1%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           ++ I NP +  +  +++ Y K+N   SAL I+  MR +G E+++ T+ +++ AC +  M 
Sbjct: 130 FSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMV 189

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF---DEMPNRDVVSWSTMI 144
               ++H +  K+G   D  V+ ALI M S+ G +  +  +F   D++  +++V+   M+
Sbjct: 190 CEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVN--VMV 247

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
             + +   P +A+ +   M    + P E ++ S++S+   +  ++LGK +H+  +++   
Sbjct: 248 TSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSV---LDCLNLGKQVHSYTLKS--G 302

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
             L + + ++L  MYSKCG+L  +  LF  +       W  MISG+     + E + LF+
Sbjct: 303 LILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFS 362

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           EM++E   P E T+ +++  C  +  L   K +H Y LR G +  + + +ALV+ Y KC 
Sbjct: 363 EMLDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCG 422

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            ++ AR ++D +   D +  +++IS Y+Q   +   F LF  M +S    +   +  +L 
Sbjct: 423 SLKLARKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILK 482

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
               +   E+G  +H YI K GL  +  + ++L+ MY+K G +    + FS+    D+  
Sbjct: 483 AAVLSEESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIA 542

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           W A++A Y  HG   EAL  +  M+  G KP+ +TF+G+L+ACSH GLV EG    + MV
Sbjct: 543 WTALIASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMV 602

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
              G+ P+  HY CMVD LGR+G L EA   I + P++P+ +VWG LLAA K++ +  +G
Sbjct: 603 KDYGIEPENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAACKIYGDVELG 662

Query: 565 EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           ++AA + +E+EP + G  V +SNI A    W++V   R++MK   V+KEPG+SSV
Sbjct: 663 KLAAKKAIELEPSDAGAYVSLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 717



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/530 (26%), Positives = 266/530 (50%), Gaps = 27/530 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++   ++N    +  +++  M     + D++T  ++L ACA +     GK +    I
Sbjct: 41  WNTIIAGALRNQNYGAVFDLFHEMCNGFQKPDSYTYSSVLAACASLEELRFGKVVQARVI 100

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G + D +V  +++ +Y++CG +  AR +F  + N  VVSW+ M+ GY +      ALE
Sbjct: 101 KCGAE-DVFVCTSIVDLYAKCGHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALE 159

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + REMR   +  +   + S++S     + V     +HA V ++     L  ++A ALI M
Sbjct: 160 IFREMRHSGVEINSCTVTSVISACGRPSMVCEASQVHAWVFKS--GFYLDTSVAAALISM 217

Query: 219 YSKCGNLAYAKQLFNRLN----QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
            SK G++  ++++F  L+    QN V    VM++ + +  +  + +RLF  M++E + P 
Sbjct: 218 NSKSGDINLSERVFEDLDDIRRQNIV---NVMVTSFSQNKKPGKAIRLFTRMLQEGLNPD 274

Query: 275 EITILSL--IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           E ++ SL  +++C     L LGK +H+Y L++G    L + ++L  MY KC  +  + +L
Sbjct: 275 EFSVCSLLSVLDC-----LNLGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSL 329

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F  +  KD   W ++IS + +   + +A  LF  M      P+E T+  +L++C+   +L
Sbjct: 330 FQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSL 389

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
              K +H Y  + G++  + L +ALV+ Y+KCG +  A +++      D    +++++GY
Sbjct: 390 PRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGY 449

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG----LG 508
             HG  ++  + F DM  SG   +      +L A      V   +S     VH     +G
Sbjct: 450 SQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAA-----VLSEESELGAQVHAYITKIG 504

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           L  +      ++ +  + G +++  +    +   P++I W AL+A+   H
Sbjct: 505 LCTEPSVGSSLLTMYSKFGSIEDCCKAFSQIN-GPDLIAWTALIASYAQH 553



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 224/438 (51%), Gaps = 16/438 (3%)

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           V ++LI  +S+      A  +F +  + +V  W+T+I G  R        ++  EM    
Sbjct: 9   VQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGF 68

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
            +P      S+++  A + ++  GK + A V++ C  E   V + T+++D+Y+KCG++A 
Sbjct: 69  QKPDSYTYSSVLAACASLEELRFGKVVQARVIK-CGAED--VFVCTSIVDLYAKCGHMAE 125

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A+++F+R++  SVVSWTVM+SGY + N+    + +F EM    V  +  T+ S+I  CG 
Sbjct: 126 AREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGR 185

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS-KDVMIWNA 346
              +     +HA++ ++GF    ++A AL+ M  K  +I  +  +F+ +   +   I N 
Sbjct: 186 PSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVNV 245

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           ++++++Q     KA  LF  M    + P+E ++  LLS+      L +GK +H+Y  K G
Sbjct: 246 MVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVLD---CLNLGKQVHSYTLKSG 302

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
           L +D+ + ++L  MY+KCG +  +Y LF E  ++D   W +M++G+  +G   EA+  F 
Sbjct: 303 LILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFS 362

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH----YGCMVDL 522
           +M   G  P+  T   +L  CS    +   K      +HG  L   I+        +V+ 
Sbjct: 363 EMLDEGTSPDESTLAAVLTVCSSLPSLPRSKE-----IHGYTLRAGIDRGMPLGSALVNT 417

Query: 523 LGRAGLLDEAHEMIKSMP 540
             + G L  A ++   +P
Sbjct: 418 YSKCGSLKLARKVYDRLP 435



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 1/195 (0%)

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
           G+ F   + ++L+D + K      A  +F    S +V  WN +I+   +       F+LF
Sbjct: 2   GYFFYEVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLF 61

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC 424
             M     +P+  T   +L+ C     L  GK +   + K G E DV + T++VD+YAKC
Sbjct: 62  HEMCNGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKC 120

Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
           G +  A  +FS      +  W  M++GY        AL  F +M  SGV+ N  T   ++
Sbjct: 121 GHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVI 180

Query: 485 NACSHAGLVTEGKSV 499
           +AC    +V E   V
Sbjct: 181 SACGRPSMVCEASQV 195


>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
 gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
          Length = 638

 Score =  355 bits (910), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 195/544 (35%), Positives = 295/544 (54%), Gaps = 41/544 (7%)

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV 179
           G L  AR LFD +P  D V ++T+IR Y     P EAL + R M    I P+E  +  +V
Sbjct: 60  GVLCHARRLFDGIPGPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVV 119

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRL 235
                    +   A+H   +R      LG    V +  AL+  Y+  G+L  +++ F+ +
Sbjct: 120 KACTIAQAREHALAVHGVALR------LGLVGQVFVGNALLHSYASAGSLGDSRRFFDEM 173

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
              +VVSW  MI GY +  +  E   LF EM  +     E T++SL+I C   G L++G+
Sbjct: 174 VDRNVVSWNSMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGR 233

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCRE------------------------------ 325
            +H  +L +G    L + +ALVDMYGKC +                              
Sbjct: 234 LVHCRMLVSGSRVDLILESALVDMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCAQTKHG 293

Query: 326 -IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            + +AR  FD M  ++++ WNA+IS Y Q     +A +L+  M+   + P+E+T+V +LS
Sbjct: 294 SVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLS 353

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
                G L +GK +H YI       DV L  +L+DMYAKCG V+ A  LFSE   R++  
Sbjct: 354 ASGRIGDLTVGKMVHLYIRDNIYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVVS 413

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           WN ++ G  MHG   + + FF  M      P+GITF+ LL+ACSH GL+  G+  F+ M 
Sbjct: 414 WNVIIGGLAMHGRALDTITFFRSMVTDSFAPDGITFVALLSACSHGGLLETGQHYFESMR 473

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
           H   +  ++EHY CMVDLLGR G L++A  +IK MP++P+++VWGALL A ++H N  +G
Sbjct: 474 HVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHGNVKIG 533

Query: 565 EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
                Q+LE+E  + G  VL+SN+    ++W D+  +R++MKE   +K+ G SS+E+N  
Sbjct: 534 RQVIKQLLELEGISGGLFVLISNLLYETHQWEDMKRLRKLMKEWGTRKDMGVSSIEINNS 593

Query: 625 VHKF 628
           +H+F
Sbjct: 594 IHEF 597



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 236/473 (49%), Gaps = 36/473 (7%)

Query: 18  AHIIKTHFKFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPT 76
            H +  H +  +  I  P    YN+++ +Y  ++ P  AL ++  M + G   + FT+P 
Sbjct: 58  GHGVLCHARRLFDGIPGPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPF 117

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           ++KAC           +HG A++ GL G  +V NAL+  Y+  GSL  +R  FDEM +R+
Sbjct: 118 VVKACTIAQAREHALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRN 177

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           VVSW++MI GY + G   E   +  EMR       E  ++S++   +   ++++G+ +H 
Sbjct: 178 VVSWNSMIGGYAQAGDTREVCSLFGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHC 237

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT------------ 244
            ++      ++ + + +AL+DMY KCG+L  A++ F  +   SVVSWT            
Sbjct: 238 RML--VSGSRVDLILESALVDMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSV 295

Query: 245 -------------------VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
                               MIS Y++  + +E + L+ +M  + + P EIT+++++   
Sbjct: 296 NAARCWFDHMPERNIVSWNAMISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSAS 355

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
           G +G L +GK +H YI  N +   +++ N+L+DMY KC ++ +A +LF  M +++V+ WN
Sbjct: 356 GRIGDLTVGKMVHLYIRDNIYNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVVSWN 415

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-WLHTYIEK 404
            +I   A           F  M      P+ +T V LLS C+  G LE G+ +  +    
Sbjct: 416 VIIGGLAMHGRALDTITFFRSMVTDSFAPDGITFVALLSACSHGGLLETGQHYFESMRHV 475

Query: 405 QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHG 456
             ++ +V     +VD+  + G +  A  L  E   + D+ +W A++    +HG
Sbjct: 476 YNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGACRIHG 528


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  355 bits (910), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 215/624 (34%), Positives = 328/624 (52%), Gaps = 51/624 (8%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N  ++SY++  + S AL ++  M +  S   N  I   L+     L   L  E+  
Sbjct: 59  IKEWNVAISSYMRTGRCSEALRVFKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMP- 117

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
                  + D    N +I+ Y    +L  AR LF+ MP RDV SW+T++ GY + G  ++
Sbjct: 118 -------ERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDD 170

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG------KAIHACVVRNC------K 203
           A  V   M       ++V+  +++S +   + ++        +   A V  NC      K
Sbjct: 171 ARRVFDRM----PEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVK 226

Query: 204 DEKL-------------GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
            +K+              V     +I  Y++ G +  A+QLF+    + V +WT M+SGY
Sbjct: 227 KKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGY 286

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGG--LQLGKWLHAYI-LRNGFE 307
           I+   + E   LF  M E N    E++  +++   G+V G  +++ K L   +  RN   
Sbjct: 287 IQNRMVEEARELFDRMPERN----EVSWNAML--AGYVQGERVEMAKELFDVMPCRN--- 337

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             ++  N ++  Y +C +I  A+ LFD M  +D + W A+I+ Y+Q+    +A  LF+ M
Sbjct: 338 --VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLM 395

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           +    R N  +    LS C +  ALE+GK LH  + K G E    +  AL+ MY KCG +
Sbjct: 396 EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 455

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             A  LF E   +DI  WN M+AGY  HG GEEAL FF  M+R G+KP+  T + +L+AC
Sbjct: 456 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSAC 515

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           SH GLV +G+  F  M    G+ P  +HY CMVDLLGRAGLL+EAH ++K+MP  P+  +
Sbjct: 516 SHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAI 575

Query: 548 WGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
           WG LL AS++H N  + E AA +I  +EP+N G  VL+SN+YA + RW DV  +R  M++
Sbjct: 576 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 635

Query: 608 IRVKKEPGFSSVEVNGLVHKFIRG 631
             VKK PG+S +E+    H F  G
Sbjct: 636 KGVKKVPGYSWIEIQNKTHTFSVG 659



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 151/345 (43%), Gaps = 51/345 (14%)

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
           + +  W V IS Y+R    +E +R+F  M       S ++  ++I      G L+ G++ 
Sbjct: 57  SDIKEWNVAISSYMRTGRCSEALRVFKRMPRW----SSVSYNAMI-----SGYLRNGEFE 107

Query: 298 HAYILRNGF-EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
            A +L +   E  L   N ++  Y + R +  AR LF+ M  +DV  WN ++S YAQ  C
Sbjct: 108 LARMLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGC 167

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-------------KW---LHT 400
           +D A  +F  M       N+V+   LLS   +   LE                W   L  
Sbjct: 168 VDDARRVFDRMP----EKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGG 223

Query: 401 YIEKQ----------GLEV-DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           +++K+           ++V DV+    ++  YA+ G+++ A +LF E+   D+  W AM+
Sbjct: 224 FVKKKKIVEARQFFDSMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMV 283

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           +GY  +   EEA   F  M     + N +++  +L        V   K +FD M      
Sbjct: 284 SGYIQNRMVEEARELFDRMP----ERNEVSWNAMLAGYVQGERVEMAKELFDVMP----- 334

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
              +  +  M+    + G + EA  +   MP R + + W A++A 
Sbjct: 335 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR-DPVSWAAMIAG 378


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  354 bits (909), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 211/622 (33%), Positives = 330/622 (53%), Gaps = 39/622 (6%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           + ++N  +T++++N +  SAL ++  M +  S     +   ++  C      +L +++  
Sbjct: 49  IVKWNIAITNHMRNGQCDSALRLFNSMPRRSS----ISWNAMISGCLSNDKFYLARQL-- 102

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              +     D    N +I       +L +AR LFD+MP RDVVSW+ M+ GY + G  +E
Sbjct: 103 --FEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKE 160

Query: 156 ALEVMREMRFMDIRPSEVAMISMVS---------LFADVADVDL-------------GKA 193
           A E+  EM   +       + + V          LF   AD +L              + 
Sbjct: 161 AKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRL 220

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           + A  + +   E+  V+  T +I  Y++ G L  A++LF       V +WT M+SGY++ 
Sbjct: 221 VDARGIFDRMPERDEVSWNT-MISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQN 279

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
             ++E  R+F  M E+N   S   I++  ++C  +   Q  +   A   +N     ++  
Sbjct: 280 GMLDEARRVFDGMPEKNSV-SWNAIIAGYVQCKRMD--QARELFEAMPCQN-----VSSW 331

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           N ++  Y +  +I  AR  FD M  +D + W A+I+ YAQ+   ++A  LF+ MK    R
Sbjct: 332 NTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGER 391

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
            N  T    LS C E  ALE+GK +H  + K GLE    +  AL+ MY KCG+++ AY +
Sbjct: 392 LNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIV 451

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F     +++  WN M+AGY  HG G+EAL+ F  M+++G+ P+ +T +G+L+ACSH GLV
Sbjct: 452 FEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLV 511

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            +G   F  M    G+    +HY CM+DLLGRAG LD+A  ++K+MP  P+   WGALL 
Sbjct: 512 DKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLG 571

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           AS++H N  +GE AA  I E+EP N G  VL+SN+YA + RW DV  +R  M++  VKK 
Sbjct: 572 ASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKV 631

Query: 614 PGFSSVEVNGLVHKFIRGGMVN 635
           PG+S VEV   +H F  G  V+
Sbjct: 632 PGYSWVEVQNKIHTFTVGDSVH 653


>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 591

 Score =  354 bits (909), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 182/501 (36%), Positives = 292/501 (58%), Gaps = 6/501 (1%)

Query: 141 STMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR 200
           + +IR   R  +    +E + EM  + + P    +  ++   A +  +  G+ IHA   R
Sbjct: 79  NAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHA---R 135

Query: 201 NCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE 258
           + K   +G  V ++  L+ +YS CG++   +++F+      +VSWT +I  + +    + 
Sbjct: 136 SIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSR 195

Query: 259 GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALV 317
            V  F EM +  +     T++ ++  C  +G L LG+ +H+YI      +  + + NAL+
Sbjct: 196 AVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALL 255

Query: 318 DMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEV 377
           DMY KC ++ SA  +FD M  K+V+ WNA+IS  A      +A + F  M+   V+P+EV
Sbjct: 256 DMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEV 315

Query: 378 TMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
           T+VG+L+ C   G LE+GKW+H Y+ +  +  D  +  AL+DMYAKCG ++ A+R+F   
Sbjct: 316 TLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESM 375

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
             RD+  + AM+ G  +HG    A   F +M R G++PN +TF+GLL ACSH GLV EGK
Sbjct: 376 KRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGK 435

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
             F +M     L P+ EHYGCM+DLLGRAGL+ EA E+I  M +RP++   GALL A ++
Sbjct: 436 KYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRI 495

Query: 558 HKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
           H N  +GE    ++ E++P   G  +LM+N+Y+  +RW D   +R+ MK  +++K PG S
Sbjct: 496 HGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPGCS 555

Query: 618 SVEVNGLVHKFIRGGMVNWKS 638
            +EV+G+VH+F +G   + +S
Sbjct: 556 LIEVDGVVHEFRKGDKSHPRS 576



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/424 (33%), Positives = 233/424 (54%), Gaps = 4/424 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L+  N+++ S  +N+   S +     M   G E D FTIP +LKA A +     G++IH 
Sbjct: 75  LSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHA 134

Query: 96  FAIKNGLDG-DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
            +IK G+ G + YVSN L+++YS CGS+   + +FDE P+RD+VSW+T+I+ + + GL  
Sbjct: 135 RSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYS 194

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
            A+E   EM  + +R     ++ ++S  +++ D++LG+ +H+  +R+  D K  V +  A
Sbjct: 195 RAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHS-YIRHYIDMKADVFVGNA 253

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+DMY KC +L  A ++F+ +   +VV+W  MISG        E +  F  M ++ V P 
Sbjct: 254 LLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPD 313

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           E+T++ ++  C  +G L++GKW+HAY+ RN       + NAL+DMY KC  I  A  +F+
Sbjct: 314 EVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFE 373

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            MK +DV  + A+I   A     + AF++F  M    + PNEVT +GLL  C+  G +  
Sbjct: 374 SMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAE 433

Query: 395 G-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGY 452
           G K+     +K  L         ++D+  + G V  A  +  +  I  D+    A++   
Sbjct: 434 GKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGAC 493

Query: 453 GMHG 456
            +HG
Sbjct: 494 RIHG 497



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 80/147 (54%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +N++++      +   AL+ +  M+  G + D  T+  +L +CA + +  +GK 
Sbjct: 276 VKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKW 335

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H +  +N +  D +V NAL+ MY++CGS+  A  +F+ M  RDV S++ MI G    G 
Sbjct: 336 VHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFESMKRRDVYSYTAMIFGLALHGE 395

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMV 179
              A +V  EM  + I P+EV  + ++
Sbjct: 396 ANWAFQVFSEMFRVGIEPNEVTFLGLL 422


>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
 gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
          Length = 513

 Score =  354 bits (909), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 179/497 (36%), Positives = 295/497 (59%), Gaps = 14/497 (2%)

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           ++ ++ GY  G  P+ A  V R +      P      +++   A    +  G+ +H  ++
Sbjct: 2   FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61

Query: 200 RNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
                 K+G    + +  +L+  YS C     A ++F+ +    VVSWT +ISGY+R   
Sbjct: 62  ------KMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGL 115

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
            +E V LF  M   +V P+  T +S+++ CG  G L +GK +H    ++ F   L ++NA
Sbjct: 116 FDEAVGLFLRM---DVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNA 172

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
           L+DMY KC  +  A+ +FD +  KD++ W ++IS   Q +C  +A ELF  M+ S + P+
Sbjct: 173 LMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPD 232

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
            + +  +LS C   GAL+ G+W+H +I+++ ++ D+ + TA+VDMYAKCG +  + ++F+
Sbjct: 233 GIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFN 292

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
              ++++  WNA++ G  MHG   + L  F +M R G++PN +TF+ +L AC H GLV E
Sbjct: 293 GMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNE 352

Query: 496 GKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           G+  F+ M      L P++EHYGCMVDLL RA LLDEA E+ K+MP+ P++ + GALL+A
Sbjct: 353 GRQYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSA 412

Query: 555 SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEP 614
            K + N  + +    + +E++  + G  VL+SNI+A+  RW+DV  +RR+MKE  +KK P
Sbjct: 413 CKENGNTELPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKPP 472

Query: 615 GFSSVEVNGLVHKFIRG 631
           G + +E++G  H+FI G
Sbjct: 473 GSTVIELDGKAHEFIVG 489



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 136/392 (34%), Positives = 216/392 (55%), Gaps = 16/392 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+LV+ Y   ++P +A  +Y  + K+G   D FT P +LK+CA+ +    G+++HG  I
Sbjct: 2   FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   + YV N+L+  YS C     A  +FDEM  RDVVSW+ +I GY R GL +EA+ 
Sbjct: 62  KMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVG 121

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +      MD+ P+    +S++        + +GK IH    ++     +G+ ++ AL+DM
Sbjct: 122 LFLR---MDVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFG--VGLEVSNALMDM 176

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCG L  AKQ+F+ L +  +VSWT +ISG ++CN   E + LF +M    + P  I +
Sbjct: 177 YVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIIL 236

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +G L  G+W+H +I R   ++ + +  A+VDMY KC  I  +  +F+GM  
Sbjct: 237 TSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPH 296

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-- 396
           K+V+ WNA+++  A      K  ELF  M    +RPNEVT + +L+ C   G +  G+  
Sbjct: 297 KNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQY 356

Query: 397 --W-------LHTYIEKQGLEVDVILKTALVD 419
             W       L   +E  G  VD++ +  L+D
Sbjct: 357 FNWMKGQQYNLPPRLEHYGCMVDLLCRARLLD 388



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 87/157 (55%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + S+++  ++ N P  AL ++  M+ +G E D   + ++L ACA++     G+ +H 
Sbjct: 198 IVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHE 257

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              +  +  D  +  A++ MY++CG +  +  +F+ MP+++V++W+ ++ G    G   +
Sbjct: 258 HIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYK 317

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
            LE+  EM  + +RP+EV  +++++       V+ G+
Sbjct: 318 VLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGR 354


>gi|449522919|ref|XP_004168473.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 670

 Score =  354 bits (909), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 199/584 (34%), Positives = 318/584 (54%), Gaps = 40/584 (6%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           N++V  Y++N + +  + +   M +   E D++T    LKAC  +L   +G E+ G A+ 
Sbjct: 124 NAMVNGYLQNERYNDCIELLKMMSRCHLEFDSYTCNFALKACMFLLDYEMGMEVIGLAVC 183

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
            GL G  ++ ++++                                     GL  E   +
Sbjct: 184 KGLAGGRFLGSSILNFLE---------------------------------GLFREGYNL 210

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR--NCKDEKLGVAIATALID 217
             +M +  I PS V MIS++    ++ ++  GK +H  V+     +D +    + T LID
Sbjct: 211 FLDMLYNKIEPSAVTMISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTR----VLTTLID 266

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY K G++  A+ +F  +   ++VSW VMISGY++   + E +RLF ++I ++V     T
Sbjct: 267 MYCKSGDVESARWIFENMPSRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGT 326

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++SLI  C     L  GK LH +I R G + +L +  A+VD+Y KC  +  A ++F+ MK
Sbjct: 327 VVSLIQLCSRTADLDGGKILHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMK 386

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           +K+V+ W A++   AQ      A +LF  M+  +V  N +T+V L+  CT  G L  G+ 
Sbjct: 387 NKNVISWTAMLVGLAQNGHARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRS 446

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY-RDICMWNAMMAGYGMHG 456
           +H  + +     +V++ TAL+DMYAKC  +N A  +F   +  +D+ ++N+M++GYGMHG
Sbjct: 447 VHATLTRFHFASEVVVMTALIDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHG 506

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
            G +AL  +  M R G++PN  TF+ LL+ACSH+GLV EG ++F  MV      P  + Y
Sbjct: 507 LGHKALCVYHRMNREGLQPNESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLY 566

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            C+VDLL RAG L +A E+I  MP  P   +   LL    LHK+  +G   A ++L +E 
Sbjct: 567 ACIVDLLSRAGRLRQAEELINQMPFTPTSGILETLLNGCLLHKDIELGVKLADRLLSLES 626

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
           +N    + +SNIYA A+RW+ V  VR +M E  +KK PG+SS+E
Sbjct: 627 RNPSIYITLSNIYAKASRWDSVKYVRGLMMEQEIKKIPGYSSIE 670



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 233/462 (50%), Gaps = 38/462 (8%)

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           I N + GD ++   L+  YS  G L +AR +FDE+P    V  + M+ GY +     + +
Sbjct: 81  ITNPIYGDQFLVAKLVAAYSSLGCLENARKVFDEIPQPKTVLCNAMVNGYLQNERYNDCI 140

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           E+++             M+S   L  D    +   A+ AC+     D ++G+ +    + 
Sbjct: 141 ELLK-------------MMSRCHLEFDSYTCNF--ALKACMF--LLDYEMGMEVIGLAV- 182

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
               C  LA  + L      +S++++   + G  R     EG  LF +M+   + PS +T
Sbjct: 183 ----CKGLAGGRFL-----GSSILNF---LEGLFR-----EGYNLFLDMLYNKIEPSAVT 225

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++SLI  CG +  L  GK +H ++L  G      +   L+DMY K  ++ SAR +F+ M 
Sbjct: 226 MISLIQSCGEMRNLTFGKCMHGFVLGFGMSRDTRVLTTLIDMYCKSGDVESARWIFENMP 285

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           S++++ WN +IS Y Q   + +   LF  + +  V  +  T+V L+ LC+    L+ GK 
Sbjct: 286 SRNLVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKI 345

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH +I ++GL+++++L TA+VD+YAKCG +  A  +F     +++  W AM+ G   +G 
Sbjct: 346 LHGFIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGH 405

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
             +AL  F  M+   V  N +T + L+  C+  GL+ EG+SV   +        ++    
Sbjct: 406 ARDALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTR-FHFASEVVVMT 464

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRP-NMIVWGALLAASKLH 558
            ++D+  +   ++ A EM+    L P ++I++ ++++   +H
Sbjct: 465 ALIDMYAKCSKINSA-EMVFKYGLTPKDVILYNSMISGYGMH 505



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 159/303 (52%), Gaps = 4/303 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N +++ Y++N      L ++  +  +    D+ T+ ++++ C++      GK +HG
Sbjct: 289 LVSWNVMISGYVQNGLLVETLRLFQKLIMDDVGFDSGTVVSLIQLCSRTADLDGGKILHG 348

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F  + GLD +  +  A++ +Y++CGSL  A  +F+ M N++V+SW+ M+ G  + G   +
Sbjct: 349 FIYRRGLDLNLVLPTAIVDLYAKCGSLAYASSVFERMKNKNVISWTAMLVGLAQNGHARD 408

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL++  +M+   +  + + ++S+V     +  +  G+++HA + R     +  V + TAL
Sbjct: 409 ALKLFDQMQNERVTFNALTLVSLVYCCTLLGLLREGRSVHATLTRFHFASE--VVVMTAL 466

Query: 216 IDMYSKCGNLAYAKQLFNR-LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           IDMY+KC  +  A+ +F   L    V+ +  MISGY      ++ + ++  M  E + P+
Sbjct: 467 IDMYAKCSKINSAEMVFKYGLTPKDVILYNSMISGYGMHGLGHKALCVYHRMNREGLQPN 526

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLF 333
           E T +SL+  C   G ++ G  L   ++++     +  +   +VD+  +   +R A  L 
Sbjct: 527 ESTFVSLLSACSHSGLVEEGIALFQNMVKDHNTTPTDKLYACIVDLLSRAGRLRQAEELI 586

Query: 334 DGM 336
           + M
Sbjct: 587 NQM 589


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  354 bits (908), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 194/600 (32%), Positives = 314/600 (52%), Gaps = 19/600 (3%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           +V ++ +N     AL  Y  M   G   D       +  C+       G+ +H   ++  
Sbjct: 29  IVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETR 88

Query: 102 L-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           L + D  +  ALI MY+ C  L  AR  FDEM  + +V+W+ +I GY R G    AL++ 
Sbjct: 89  LLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIY 148

Query: 161 REMRFMD---IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IAT 213
           ++M       ++P  +   S +     V D+  G+ I A  V +      G A    +  
Sbjct: 149 QDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVAS------GYASDSIVQN 202

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALI+MYSKCG+L  A+++F+RL    V++W  MISGY +     + + LF  M   +  P
Sbjct: 203 ALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKP 262

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE-IRSARTL 332
           + +T + L+  C  +  L+ G+ +H  +  +G+E  L + N L++MY KC   +  AR +
Sbjct: 263 NVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQV 322

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ M+++DV+ WN +I AY Q      A ++F  M++  V PNE+T+  +LS C   GA 
Sbjct: 323 FERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAK 382

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
             GK +H  I     + DV+L+ +L++MY +CG ++    +F+    + +  W+ ++A Y
Sbjct: 383 RQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAY 442

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             HG     L  F ++ + G+  + +T +  L+ACSH G++ EG   F  MV   GL P 
Sbjct: 443 AQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPD 502

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
             H+ CMVDLL RAG L+ A  +I  MP  P+ + W +LL+  KLH +       A ++ 
Sbjct: 503 YRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLF 562

Query: 573 EIEPQNYGYNV-LMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           E+E ++    V L+SN+YA A RW+D   VR+       +K PG S +E+N  VH+F+ G
Sbjct: 563 ELESEDEHSTVTLLSNVYAEAGRWDD---VRKTRNRRAARKNPGCSYIEINDTVHEFVAG 619



 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 240/454 (52%), Gaps = 7/454 (1%)

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           MY +CGS+  A  +F  + + + VSW+ ++  + R G   EAL   R M    +RP    
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
            +  + + +   D+  G+ +HA ++   +  +  + + TALI MY++C +L  A++ F+ 
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILET-RLLEFDIILGTALITMYARCRDLELARKTFDE 119

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE---ENVFPSEITILSLIIECGFVGGL 291
           + + ++V+W  +I+GY R  +    ++++ +M+    E + P  IT  S +  C  VG +
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDI 179

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
             G+ + A  + +G+     + NAL++MY KC  + SAR +FD +K++DV+ WN +IS Y
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
           A+     +A ELF  M  +  +PN VT +GLL+ CT    LE G+ +H  + + G E D+
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDL 299

Query: 412 ILKTALVDMYAKC-GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
           ++   L++MY KC   +  A ++F     RD+  WN ++  Y  +G  ++AL  F  M+ 
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
             V PN IT   +L+AC+  G   +GK+V   +  G      +     M ++  R G LD
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLM-NMYNRCGSLD 418

Query: 531 EAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
           +   +  ++  + +++ W  L+AA   H +   G
Sbjct: 419 DTVGVFAAIRDK-SLVSWSTLIAAYAQHGHSRTG 451



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 133/426 (31%), Positives = 228/426 (53%), Gaps = 8/426 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFM---RKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           L  +N+L+  Y +N     AL IY  M      G + D  T  + L AC  V     G+E
Sbjct: 125 LVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGRE 184

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           I    + +G   D+ V NALI MYS+CGSL SAR +FD + NRDV++W+TMI GY + G 
Sbjct: 185 IEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGA 244

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
             +ALE+ + M   D +P+ V  I +++   ++ D++ G+AIH  V  +  +  L   I 
Sbjct: 245 ATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDL--VIG 302

Query: 213 TALIDMYSKC-GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
             L++MY+KC  +L  A+Q+F R+    V++W ++I  Y++  +  + + +F +M  ENV
Sbjct: 303 NVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENV 362

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P+EIT+ +++  C  +G  + GK +HA I     +  + + N+L++MY +C  +     
Sbjct: 363 APNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVG 422

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +F  ++ K ++ W+ +I+AYAQ        E F  +    +  ++VTMV  LS C+  G 
Sbjct: 423 VFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGM 482

Query: 392 LEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY-RDICMWNAMM 449
           L+ G +   + +   GL  D      +VD+ ++ G +  A  L  +  +  D   W +++
Sbjct: 483 LKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLL 542

Query: 450 AGYGMH 455
           +G  +H
Sbjct: 543 SGCKLH 548



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 171/336 (50%), Gaps = 14/336 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++++ Y K    + AL ++  M  N  + +  T   +L AC  +     G+ IH    
Sbjct: 232 WNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVR 291

Query: 99  KNGLDGDAYVSNALIQMYSEC-GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           ++G + D  + N L+ MY++C  SL  AR +F+ M  RDV++W+ +I  Y + G  ++AL
Sbjct: 292 EDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDAL 351

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALI 216
           ++ ++M+  ++ P+E+ + +++S  A +     GKA+HA +    CK +   V +  +L+
Sbjct: 352 DIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKAD---VVLENSLM 408

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           +MY++CG+L     +F  +   S+VSW+ +I+ Y +      G+  F E+++E +   ++
Sbjct: 409 NMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDV 468

Query: 277 TILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           T++S +  C   G L+ G +   + +  +G          +VD+  +   + +A  L   
Sbjct: 469 TMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHD 528

Query: 336 MKS-KDVMIWNAVIS-------AYAQAHCIDKAFEL 363
           M    D + W +++S           A   DK FEL
Sbjct: 529 MPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFEL 564



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 119/271 (43%), Gaps = 15/271 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+ +Y++  +   AL+I+  M+      +  T+  +L ACA +     GK +H    
Sbjct: 334 WNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIA 393

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
                 D  + N+L+ MY+ CGSL     +F  + ++ +VSWST+I  Y + G     LE
Sbjct: 394 SGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLE 453

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA--TALI 216
              E+    +   +V M+S +S  +    +  G      +V    D  L         ++
Sbjct: 454 HFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMV---GDHGLAPDYRHFLCMV 510

Query: 217 DMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEM--IEENVFP 273
           D+ S+ G L  A+ L + +      V+WT ++SG    N+     R+  ++  +E     
Sbjct: 511 DLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEH 570

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRN 304
           S +T+LS +         + G+W      RN
Sbjct: 571 STVTLLSNVYA-------EAGRWDDVRKTRN 594


>gi|449434412|ref|XP_004134990.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Cucumis sativus]
          Length = 704

 Score =  354 bits (908), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 200/590 (33%), Positives = 327/590 (55%), Gaps = 19/590 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N+L++ Y +      A  ++  MR+   +    T+ +++ +C    +   GK IHG
Sbjct: 129 VVSWNALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHG 188

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K GLD D+ V NAL+ MY +C  L   + LF E+  + VVSW+TMI  + + GL  E
Sbjct: 189 LGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSE 248

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAI 211
           A+ V ++M    +  + V M+S++S     A+ + G     C+  +C   K+G    V++
Sbjct: 249 AMLVFKQMLEESVNANSVTMVSILS-----ANANTG-----CI--HCYATKIGLVENVSV 296

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
            T+L+  Y KCG +  A+ ++    + ++V+ T +IS Y    ++   VRL++ +   ++
Sbjct: 297 VTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDM 356

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
               + ++ +I    +   + +G   H Y +++G      +AN  + MY K   I +  +
Sbjct: 357 KLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFS 416

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           LF  M  K +  WN+VIS+ AQA     A  LF  M +S   P+ +T+  LLS C + G 
Sbjct: 417 LFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGN 476

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L  G+ LH YI +  L+++  + TALVDMY KCG ++ A  +F       +  WN++++G
Sbjct: 477 LHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISG 536

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           YG+ G    AL+ + +M   G+KPN ITF G+L AC+H GLV EG+  F  M    G+VP
Sbjct: 537 YGLFGFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVP 596

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
           + +H   MV +LGRAGL +EA   I++M   P+  VWGALL+A  +H+   +GE  A ++
Sbjct: 597 ESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGALLSACCIHQEVKLGESVAKKL 656

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
                +N G+ VLMSN+YA + RWNDVA +R++M+E+    E G S V +
Sbjct: 657 FFSNCRNGGFFVLMSNLYAASRRWNDVARIRKMMREM---GEDGCSGVSL 703



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 159/587 (27%), Positives = 277/587 (47%), Gaps = 39/587 (6%)

Query: 35  PLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTIL----KACAQVLMTHLG 90
           PL  +  L+   +K N  + +L I AF+  + +       P+      KA A  L TH  
Sbjct: 34  PLLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSS---FAPSFCSENEKAEANQLQTHF- 89

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
                  IK G D   YVS A + +YS+ G + +A+ LFD+ P +DVVSW+ +I GY R 
Sbjct: 90  -------IKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRC 142

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           G   +A ++  EMR  +  P +  ++S++           GK+IH   V+   D  L   
Sbjct: 143 GNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLD--LDSQ 200

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           +  AL+ MY KC +L   K LF  + + SVVSW  MI  + +    +E + +F +M+EE+
Sbjct: 201 VKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEES 260

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           V  + +T++S++      G       +H Y  + G   ++++  +LV  Y KC  I  A 
Sbjct: 261 VNANSVTMVSILSANANTG------CIHCYATKIGLVENVSVVTSLVCSYVKCGYIELAE 314

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            ++     K+++   A+IS YA+   +     L+  ++   ++ + V MVG++   T   
Sbjct: 315 LIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPD 374

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
            + +G   H Y  K GL +D ++    + MY+K  +++  + LF E   + +  WN++++
Sbjct: 375 HIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVIS 434

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
                G   +A+  F  M  SG  P+ IT   LL+AC   G +      F +++H   L 
Sbjct: 435 SCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLH-----FGEILHCYILR 489

Query: 511 PKIEHYG----CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
             ++  G     +VD+  + G +D A  + KSM   P +  W +L++   L    +   +
Sbjct: 490 NNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMK-EPCLASWNSLISGYGLFGFHNHALL 548

Query: 567 AATQILE--IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVK 611
             T+++E  I+P      +  S I A       V   R+  K ++ K
Sbjct: 549 CYTEMMEKGIKPN----KITFSGILAACTHGGLVEEGRKYFKIMKKK 591


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  354 bits (908), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 182/441 (41%), Positives = 271/441 (61%), Gaps = 5/441 (1%)

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           GK IHA ++ +   + L   +   L+++Y+KCG+L YA++LF+ ++   VV+WT +I+GY
Sbjct: 34  GKIIHALLLNSRFRDDL--VMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALITGY 91

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL--GKWLHAYILRNGFEF 308
            + +   + + L  EM+   + P++ T+ SL+     VG   +  G+ LH   LR G++ 
Sbjct: 92  SQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDS 151

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
           ++ ++ A++DMY +C  +  A+ +FD M SK+ + WNA+I+ YA+    DKAF LF +M 
Sbjct: 152 NVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNML 211

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
              V+P   T   +L  C   G+LE GKW+H  + K G ++   +   L+DMYAK G + 
Sbjct: 212 RENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIE 271

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A ++F     RD+  WN+M+ GY  HG G+ AL  F +M R+ + PN ITF+ +L ACS
Sbjct: 272 DAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACS 331

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           HAGL+ EG+  FD M+    + P+I HY  MVDLLGRAG LD A + I  MP++P   VW
Sbjct: 332 HAGLLDEGRHYFD-MMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVW 390

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
           GALL A ++HKN  +G  AA  I E++    G +VL+ NIYA+A RWND A VR++MKE 
Sbjct: 391 GALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWNDAAKVRKMMKES 450

Query: 609 RVKKEPGFSSVEVNGLVHKFI 629
            VKKEP  S VE+   VH F+
Sbjct: 451 GVKKEPACSWVEMENEVHVFV 471



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 217/383 (56%), Gaps = 5/383 (1%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           T+LK C  +   + GK IH   + +    D  + N L+ +Y++CG LV AR LFDEM +R
Sbjct: 20  TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL--GKA 193
           DVV+W+ +I GY +   P++AL ++ EM  + ++P++  + S++   + V   D+  G+ 
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           +H   +R   D    V ++ A++DMY++C +L  A+ +F+ +   + VSW  +I+GY R 
Sbjct: 140 LHGLCLRYGYDS--NVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARK 197

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
            + ++   LF+ M+ ENV P+  T  S++  C  +G L+ GKW+HA +++ G +    + 
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           N L+DMY K   I  A+ +FD +  +DV+ WN++++ Y+Q      A + F  M  +++ 
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIA 317

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           PN++T + +L+ C+ AG L+ G+     ++K  +E  +     +VD+  + G ++ A + 
Sbjct: 318 PNDITFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQF 377

Query: 434 FSE-AIYRDICMWNAMMAGYGMH 455
            SE  I     +W A++    MH
Sbjct: 378 ISEMPIKPTAAVWGALLGACRMH 400



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 171/315 (54%), Gaps = 5/315 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL--GKEIHGF 96
           + +L+T Y ++++P  AL +   M + G + + FT+ ++LKA + V  T +  G+++HG 
Sbjct: 84  WTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGL 143

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
            ++ G D + YVS A++ MY+ C  L  A+ +FD M +++ VSW+ +I GY R G  ++A
Sbjct: 144 CLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKA 203

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
             +   M   +++P+     S++   A +  ++ GK +HA +++    EKL   +   L+
Sbjct: 204 FCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIK--WGEKLVAFVGNTLL 261

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           DMY+K G++  AK++F+RL +  VVSW  M++GY +       ++ F EM+   + P++I
Sbjct: 262 DMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDI 321

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T L ++  C   G L  G+     + +   E  ++    +VD+ G+   +  A      M
Sbjct: 322 TFLCVLTACSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEM 381

Query: 337 KSKDV-MIWNAVISA 350
             K    +W A++ A
Sbjct: 382 PIKPTAAVWGALLGA 396



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 116/226 (51%), Gaps = 4/226 (1%)

Query: 10  LEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV 69
           L+   +CH H+ +    F      N ++ +N+L+  Y +  +   A  +++ M +   + 
Sbjct: 160 LDMYARCH-HLEEAQLIFDVMVSKNEVS-WNALIAGYARKGQGDKAFCLFSNMLRENVKP 217

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF 129
            +FT  ++L ACA +     GK +H   IK G    A+V N L+ MY++ GS+  A+ +F
Sbjct: 218 THFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVF 277

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           D +  RDVVSW++M+ GY + GL + AL+   EM    I P+++  + +++  +    +D
Sbjct: 278 DRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLD 337

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL 235
            G+  H   +    + +  ++    ++D+  + G+L  A Q  + +
Sbjct: 338 EGR--HYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEM 381



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 93/178 (52%), Gaps = 12/178 (6%)

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           LL  CT    L  GK +H  +       D++++  L+++YAKCGD+  A +LF E   RD
Sbjct: 21  LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL--VTEGKSV 499
           +  W A++ GY  H   ++AL+   +M R G+KPN  T   LL A S  G   V +G+  
Sbjct: 81  VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ- 139

Query: 500 FDKMVHGLGLVPKIE---HYGC-MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
               +HGL L    +   +  C ++D+  R   L+EA ++I  + +  N + W AL+A
Sbjct: 140 ----LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEA-QLIFDVMVSKNEVSWNALIA 192


>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 618

 Score =  354 bits (908), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 191/543 (35%), Positives = 313/543 (57%), Gaps = 29/543 (5%)

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           AR +FD++P+ D     + I  Y R  L  EAL     M   ++R     +  +    A 
Sbjct: 49  ARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCAS 108

Query: 185 VADVDLGKAIHACVVRN-------CKD---------EKLGVA------------IA-TAL 215
           +  +D+GK +H+ V+R        C++           LG A            IA   L
Sbjct: 109 LLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCL 168

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I  YS+ G +  A++LF+++   S+VSW  MIS Y +  + ++G  +F  M +E   P+E
Sbjct: 169 ISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNE 228

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           IT+ +++  C  +G L++G  +           ++ ++ A+++MY KC  +   R +FD 
Sbjct: 229 ITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDH 288

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M  +DV+ W+A+I+ YAQ    ++A ELF +MK ++++PN+VT+V +LS C + G++E G
Sbjct: 289 MARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETG 348

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + + +Y+E +GL  +V + +AL+ MY+KCG++  A ++F +   RD   WN+M+ G  ++
Sbjct: 349 ERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAIN 408

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  E+A+  +  M+   VKPN ITF+GL+ AC+HAG V  G   F  M     + P IEH
Sbjct: 409 GFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEH 468

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           + C+VDL  R+G L +A+E I  M + PN+++WG LL+AS++H N  + E+A  ++LE+E
Sbjct: 469 FACIVDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAELAGKKLLELE 528

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
           P N G  V++SNIYA A RW +   VR++MK+ RV+K   +S VEV   VHKF+ G   +
Sbjct: 529 PDNSGNYVILSNIYASAGRWQEALKVRKLMKDKRVQKAAAYSWVEVEDRVHKFLVGDTSH 588

Query: 636 WKS 638
            +S
Sbjct: 589 PRS 591



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 232/448 (51%), Gaps = 35/448 (7%)

Query: 41  SLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
           S +T+Y + +  + AL  +  M +N   +  FTIP I K+CA +L   +GK++H   I+ 
Sbjct: 66  SFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCASLLAIDVGKQVHSLVIRY 125

Query: 101 GLDGDAYVSNALIQMY-------------------------------SECGSLVSARYLF 129
           G     +  NALI  Y                               S  G +++AR LF
Sbjct: 126 GFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCLISAYSRSGEVLAARELF 185

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           D+M +R +VSW+ MI  Y + G   +   + + M+     P+E+ + +++S+ A + D++
Sbjct: 186 DKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLE 245

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
           +G  I    + + K+    + ++TA+++MY KCG +   + +F+ + +  VV+W+ MI+G
Sbjct: 246 MGLRIKK--LNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAG 303

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
           Y +    NE + LF  M    + P+++T++S++  C  +G ++ G+ + +Y+   G   +
Sbjct: 304 YAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISN 363

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           + +A+AL+ MY KC  I  AR +FD +  +D + WN++I   A     + A  L+  MK 
Sbjct: 364 VYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKE 423

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
            +V+PN +T VGL++ CT AG +E+G ++  +      +  ++     +VD++ + G + 
Sbjct: 424 IEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLI 483

Query: 429 GAYRLFSE-AIYRDICMWNAMMAGYGMH 455
            AY       +  ++ +W  +++   +H
Sbjct: 484 DAYEFICRMEVEPNVVIWGTLLSASRIH 511



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 195/395 (49%), Gaps = 35/395 (8%)

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           + YA+Q+F+++           I+ Y R +  NE +R F  M + NV     TI  +   
Sbjct: 46  IQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKS 105

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR-------------------- 324
           C  +  + +GK +H+ ++R GF  S+   NAL++ Y K                      
Sbjct: 106 CASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAY 165

Query: 325 -----------EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
                      E+ +AR LFD M+ + ++ WNA+IS YAQ     K + +F  M+     
Sbjct: 166 NCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCE 225

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           PNE+T+  +LS+C + G LEMG  +    + + L  ++I+ TA+++MY KCG V+    +
Sbjct: 226 PNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLV 285

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F     RD+  W+AM+AGY  +G   EAL  F +M+ + +KPN +T + +L+AC+  G V
Sbjct: 286 FDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSV 345

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
             G+ +    V   GL+  +     ++ +  + G + +A ++   +P R N + W +++ 
Sbjct: 346 ETGERI-GSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDN-VTWNSMIM 403

Query: 554 ASKLH--KNPSMGEIAATQILEIEPQNYGYNVLMS 586
              ++     ++      + +E++P N  +  LM+
Sbjct: 404 GLAINGFAEDAIALYNRMKEIEVKPNNITFVGLMT 438



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 165/317 (52%), Gaps = 4/317 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N++++ Y +N        I+  M+    E +  T+ T+L  CA++    +G  I  
Sbjct: 193 IVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNEITLATVLSICAKLGDLEMGLRIKK 252

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
                 L  +  VS A+++MY +CG++   R +FD M  RDVV+WS MI GY + G   E
Sbjct: 253 LNDNKNLGSNMIVSTAMLEMYVKCGAVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNE 312

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           ALE+   M+   I+P++V ++S++S  A +  V+ G+ I + V    +     V +A+AL
Sbjct: 313 ALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYV--ESRGLISNVYVASAL 370

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           + MYSKCGN+  A+Q+F++L Q   V+W  MI G        + + L+  M E  V P+ 
Sbjct: 371 LGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMGLAINGFAEDAIALYNRMKEIEVKPNN 430

Query: 276 ITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           IT + L+  C   G ++LG ++  +    +    ++     +VD++ +   +  A     
Sbjct: 431 ITFVGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFIC 490

Query: 335 GMK-SKDVMIWNAVISA 350
            M+   +V+IW  ++SA
Sbjct: 491 RMEVEPNVVIWGTLLSA 507


>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
          Length = 761

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 219/681 (32%), Positives = 336/681 (49%), Gaps = 111/681 (16%)

Query: 9   NLEQTRQCHAHIIKT---HFKFSYTNIINPLTR----------------------YNSLV 43
           N    RQ HA II     H  +    +IN  TR                      + S++
Sbjct: 13  NFSHLRQLHAQIIHNSLHHHNYWVALLINHCTRLRAPPHYTHLLFNSTLNPNVFVFTSML 72

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD 103
             Y      +  + ++  M+  G   D F  P ++K+         G   H   +K G  
Sbjct: 73  RFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGNG-----GIGFHAHVLKLGHG 127

Query: 104 GDAYVSNALIQMYSECGSLVSARYLFDEMPN--RDVVSWSTMIRGYHRGGLPEEALEVMR 161
            DA+V NA+I MY+  G +  AR +FDE+P+  R V  W+ M+ GY +     +A     
Sbjct: 128 SDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGYWKWESEGQA----- 182

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
                D+ P                             RN       V   TA++  Y+K
Sbjct: 183 -QWLFDVMPE----------------------------RN-------VITWTAMVTGYAK 206

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
             +L  A++ F+ + + SVVSW  M+SGY +     E +RLF EM+   + P E T +++
Sbjct: 207 VKDLEAARRYFDCMPERSVVSWNAMLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTV 266

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS-KD 340
           I  C   G   L   L   + +   + +  +  AL+DMY KC  I +AR +FD + + ++
Sbjct: 267 ISACSSRGDPCLAASLVRTLHQKQIQLNCFVRTALLDMYAKCGSIGAARRIFDELGAYRN 326

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHM--------------------------------K 368
            + WNA+ISAY +   +D A ELF  M                                 
Sbjct: 327 SVTWNAMISAYTRVGNLDSARELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMIT 386

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
             K+ P+EVTMV ++S C   GALE+G W+  ++ +  +++ +    A++ MY++CG + 
Sbjct: 387 AKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSME 446

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A R+F E   RD+  +N +++G+  HG G EA+     M+  G++P+ +TFIG+L ACS
Sbjct: 447 DAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACS 506

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           HAGL+ EG+ VF+ +       P I+HY CMVDLLGR G L++A   ++ MP+ P+  V+
Sbjct: 507 HAGLLEEGRKVFESIKD-----PAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVY 561

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
           G+LL AS++HK   +GE+AA ++ E+EP N G  +L+SNIYA A RW DV  +R  MK+ 
Sbjct: 562 GSLLNASRIHKQVELGELAANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKG 621

Query: 609 RVKKEPGFSSVEVNGLVHKFI 629
            VKK  G+S VE  G +HKFI
Sbjct: 622 GVKKTTGWSWVEYGGKLHKFI 642


>gi|297813827|ref|XP_002874797.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297320634|gb|EFH51056.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 748

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 191/595 (32%), Positives = 325/595 (54%), Gaps = 6/595 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + +++  Y +      A ++   MR  G +    T   +L   +++  T L + +H 
Sbjct: 112 VVHWTAMIGCYSRAGIFGEACSLVKEMRFQGIKPSPVTFLEMLSGISEI--TQL-QCLHA 168

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           FA+  G + D  V N+++ +Y +C  +  A+ LFD+M  RD+VSW+TMI G+       E
Sbjct: 169 FALVYGFECDIAVMNSMLNLYCKCDRVGDAKELFDQMEQRDMVSWNTMISGFAFVANMSE 228

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            L+++  MR   +RP +    + +S+   + D+++G+ +H  +V    D  +   + TAL
Sbjct: 229 ILKLLYRMRDDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVGTGFDGDM--HLRTAL 286

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I MY KCG    + ++   +    VV WTVMISG +R     + + +F+EM+      S 
Sbjct: 287 ITMYLKCGEEEASYRVLETIPDKDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSS 346

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
             I S++  C  +G   LG  +H Y+LR G+       N+ + MY KC  +  +  LF+ 
Sbjct: 347 EAIASVVASCAQLGSFDLGASVHGYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFER 406

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP-NEVTMVGLLSLCTEAGALEM 394
           M  +D++ WNA+IS +AQ   + KA  LF  MK   V+  + +T+V LL  C+ AGAL +
Sbjct: 407 MNERDLVSWNAIISGHAQHGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPV 466

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G+ +H  + +  +    ++ TALVDMY+KCG +  A R F+   ++D+  W  ++AGYG 
Sbjct: 467 GRMIHCIVIRSFIRPCTLVDTALVDMYSKCGYLEAAQRCFNSITWKDVVSWGTLIAGYGF 526

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           HG G+ AL  + +    G+KPN + F+ +L++CSH G+V +G  +F  MV   G+ P  E
Sbjct: 527 HGKGDIALEIYSEFLHFGMKPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHE 586

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           H  C+VDLL RA  +++A +  K    RP++ V G +L AS  +    + +I    ++E+
Sbjct: 587 HLACVVDLLCRAKRVEDAFKFYKENFTRPSIDVLGIILDASHANGKTEVEDIICRDMIEL 646

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +P + G+ V + + +A   RW+DV+     M+ + +KK PG+S +E+NG    F 
Sbjct: 647 KPVDAGHYVRLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEINGKTTTFF 701



 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 156/539 (28%), Positives = 284/539 (52%), Gaps = 11/539 (2%)

Query: 30  TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL 89
           ++++N    +NS +     +      L+ ++ M  N    D FT P++LKAC  + +   
Sbjct: 5   SSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACTSLQLLSF 64

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           G  IH   + NG   D+Y+S++L+ +Y++ G L  AR +FDEM +RDVV W+ MI  Y R
Sbjct: 65  GLSIHQKVLVNGFSSDSYISSSLVNLYAKFGLLGHARKVFDEMRDRDVVHWTAMIGCYSR 124

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
            G+  EA  +++EMRF  I+PS V  + M+S  +++  +    A        C      +
Sbjct: 125 AGIFGEACSLVKEMRFQGIKPSPVTFLEMLSGISEITQLQCLHAFALVYGFECD-----I 179

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
           A+  +++++Y KC  +  AK+LF+++ Q  +VSW  MISG+     ++E ++L   M ++
Sbjct: 180 AVMNSMLNLYCKCDRVGDAKELFDQMEQRDMVSWNTMISGFAFVANMSEILKLLYRMRDD 239

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            + P + T  + +   G +  L++G+ LH  I+  GF+  + +  AL+ MY KC E  ++
Sbjct: 240 GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVGTGFDGDMHLRTALITMYLKCGEEEAS 299

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             + + +  KDV+ W  +IS   +    +KA  +F  M  S    +   +  +++ C + 
Sbjct: 300 YRVLETIPDKDVVCWTVMISGLMRLGRAEKALIVFSEMLHSGSDLSSEAIASVVASCAQL 359

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
           G+ ++G  +H Y+ +QG  +D     + + MYAKCG ++ +  LF     RD+  WNA++
Sbjct: 360 GSFDLGASVHGYVLRQGYTLDTPALNSFITMYAKCGHLDKSLILFERMNERDLVSWNAII 419

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKP-NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +G+  HG   +AL+ F +M+   V+  + +T + LL ACS AG +  G+ +   ++    
Sbjct: 420 SGHAQHGDLCKALLLFEEMKFKTVQQVDSLTVVSLLQACSSAGALPVGRMIHCIVIRSF- 478

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
           + P       +VD+  + G L+ A     S+  + +++ WG L+A    H     G+IA
Sbjct: 479 IRPCTLVDTALVDMYSKCGYLEAAQRCFNSITWK-DVVSWGTLIAGYGFHGK---GDIA 533


>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
 gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
 gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 722

 Score =  354 bits (908), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 176/536 (32%), Positives = 293/536 (54%), Gaps = 34/536 (6%)

Query: 128 LFDEMPNR-DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
           +F  +P+  + + ++  +R   R   P   +   + +R +  R  + + + ++   + V+
Sbjct: 66  VFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVS 125

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
            +  G  +H    +          + T  +DMY+ CG + YA+ +F+ ++   VV+W  M
Sbjct: 126 ALFEGMELHGVAFKIAT--LCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTM 183

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           I  Y R   ++E  +LF EM + NV P E+ + +++  CG  G ++  + ++ +++ N  
Sbjct: 184 IERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDV 243

Query: 307 EFSLAMANALVDMYG-------------------------------KCREIRSARTLFDG 335
                +  ALV MY                                KC  +  A+ +FD 
Sbjct: 244 RMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQ 303

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
            + KD++ W  +ISAY ++    +A  +F  M  S ++P+ V+M  ++S C   G L+  
Sbjct: 304 TEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA 363

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           KW+H+ I   GLE ++ +  AL++MYAKCG ++    +F +   R++  W++M+    MH
Sbjct: 364 KWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMH 423

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G   +AL  F  M++  V+PN +TF+G+L  CSH+GLV EGK +F  M     + PK+EH
Sbjct: 424 GEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEH 483

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           YGCMVDL GRA LL EA E+I+SMP+  N+++WG+L++A ++H    +G+ AA +ILE+E
Sbjct: 484 YGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELE 543

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           P + G  VLMSNIYA   RW DV  +RRVM+E  V KE G S ++ NG  H+F+ G
Sbjct: 544 PDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIG 599



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 145/504 (28%), Positives = 255/504 (50%), Gaps = 56/504 (11%)

Query: 9   NLEQTRQCHAHIIKT-------HFKFS----------------YTNIINPLTR--YNSLV 43
           +L   +Q HAHI++T        F F+                +++I +P     +N  +
Sbjct: 24  SLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFL 83

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD 103
               ++++P + +  Y  +R  G  +D F+   ILKA ++V     G E+HG A K    
Sbjct: 84  RDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATL 143

Query: 104 GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
            D +V    + MY+ CG +  AR +FDEM +RDVV+W+TMI  Y R GL +EA ++  EM
Sbjct: 144 CDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEM 203

Query: 164 RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--------------------CK 203
           +  ++ P E+ + ++VS      ++   +AI+  ++ N                    C 
Sbjct: 204 KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCM 263

Query: 204 D------EKLGVA---IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
           D       K+ V    ++TA++  YSKCG L  A+ +F++  +  +V WT MIS Y+  +
Sbjct: 264 DMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESD 323

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
              E +R+F EM    + P  +++ S+I  C  +G L   KW+H+ I  NG E  L++ N
Sbjct: 324 YPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINN 383

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
           AL++MY KC  + + R +F+ M  ++V+ W+++I+A +       A  LF  MK   V P
Sbjct: 384 ALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEP 443

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLH-TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           NEVT VG+L  C+ +G +E GK +  +  ++  +   +     +VD++ +   +  A  +
Sbjct: 444 NEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEV 503

Query: 434 F-SEAIYRDICMWNAMMAGYGMHG 456
             S  +  ++ +W ++M+   +HG
Sbjct: 504 IESMPVASNVVIWGSLMSACRIHG 527


>gi|357136755|ref|XP_003569969.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Brachypodium distachyon]
          Length = 805

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 192/599 (32%), Positives = 318/599 (53%), Gaps = 45/599 (7%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH--------LG 90
           + +++   ++      AL ++A M ++G  VD   + ++L +CAQ   +         LG
Sbjct: 209 FTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLG 268

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           + IH   ++ G   D +V N+LI MY++C  +  A  +FD +PN   VSW+ +I G+ + 
Sbjct: 269 QCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQA 328

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           G   +ALEV+  M      P+EV   +M++               +C+            
Sbjct: 329 GSYAKALEVLNLMEESGSEPNEVTYSNMLA---------------SCI------------ 361

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
                     K  ++  A+ +F+++++ SV +W  ++SGY +     + V LF  M  +N
Sbjct: 362 ----------KARDVLSARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQN 411

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           V P   T+  ++  C  +G L LG  +H+  +R      + +A+ LVDMY KC +I  AR
Sbjct: 412 VQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIAR 471

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +F+ M  +DV+ WN++IS  A     ++AF+ F  M+ + + P E +   +++ C    
Sbjct: 472 IIFNRMTERDVVCWNSMISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLS 531

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           ++  G+ +H  I K G + +V + +AL+DMYAKCG+++ A   F   + ++I  WN M+ 
Sbjct: 532 SVPQGRQIHAQIVKDGYDQNVYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIH 591

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           GY  +G GE+A+  F  M  +  +P+G+TFI +L  CSH+GLV E  + F+ M    G+ 
Sbjct: 592 GYAQNGFGEKAVDLFEYMLTTEQRPDGVTFIAVLTGCSHSGLVDEAIAFFNSMESTYGIT 651

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           P  EHY C++D LGRAG L E   +I +MP + + IVW  LLAA  +H N  +GE AA  
Sbjct: 652 PLAEHYTCLIDGLGRAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHHNAELGECAAKH 711

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +  ++P+N    VL+SNIYA   R  D +GVR +M    V K  G+S ++    VH F+
Sbjct: 712 LFRLDPKNPSPYVLLSNIYASLGRHGDASGVRALMSSRGVVKGRGYSWIDHKDGVHAFM 770



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 146/524 (27%), Positives = 258/524 (49%), Gaps = 51/524 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++ +  ++ +   AL +Y  M + G    +FT+ ++L AC  V     G+  HG A+
Sbjct: 108 WNTVIAALARSERAGEALELYEGMLREGLVPTHFTLASVLSACGAVAALDDGRRCHGLAV 167

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GLD + +V NAL+ MY++CG +  A  LFD M + + VS++ M+ G  + G  ++AL 
Sbjct: 168 KVGLDENLFVENALLGMYTKCGGVEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALR 227

Query: 159 VMREMRFMDIRPSEVAMISMV--------SLFADVADVDLGKAIHACVVRN--CKDEKLG 208
           +   M    +R   VA+ S++        S F  V    LG+ IHA +VR     D+ +G
Sbjct: 228 LFARMCRSGVRVDPVAVSSVLGSCAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVG 287

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
                +LIDMY+KC  +  A ++F+ L   S VSW ++I+G+ +     + + +   M E
Sbjct: 288 ----NSLIDMYTKCMQMDEAVKVFDSLPNISTVSWNILITGFGQAGSYAKALEVLNLMEE 343

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
               P+E+T  +++  C                                    K R++ S
Sbjct: 344 SGSEPNEVTYSNMLASC-----------------------------------IKARDVLS 368

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           AR +FD +    V  WN ++S Y Q        ELF  M+   V+P+  T+  +LS C+ 
Sbjct: 369 ARAMFDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSR 428

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
            G L++G  +H+   +  L  D+ + + LVDMY+KCG +  A  +F+    RD+  WN+M
Sbjct: 429 LGILDLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSM 488

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           ++G  +H   EEA  FF  M  +G+ P   ++  ++N+C+    V +G+ +  ++V   G
Sbjct: 489 ISGLAIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKD-G 547

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
               +     ++D+  + G +D+A      M +  N++ W  ++
Sbjct: 548 YDQNVYVGSALIDMYAKCGNMDDARVFFDCM-VTKNIVAWNEMI 590



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 216/463 (46%), Gaps = 47/463 (10%)

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           +AY  NA +      G L +AR L DEMP+R+VVSW+T+I    R     EALE+   M 
Sbjct: 73  NAYSYNAALSAARRAGDLDAARALLDEMPDRNVVSWNTVIAALARSERAGEALELYEGML 132

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
              + P+   + S++S    VA +D G+  H   V+   DE L V    AL+ MY+KCG 
Sbjct: 133 REGLVPTHFTLASVLSACGAVAALDDGRRCHGLAVKVGLDENLFV--ENALLGMYTKCGG 190

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           +  A +LF+ +   + VS+T M+ G ++   +++ +RLFA M    V    + + S++  
Sbjct: 191 VEDAVRLFDGMASPNEVSFTAMMGGLVQAGSVDDALRLFARMCRSGVRVDPVAVSSVLGS 250

Query: 285 CG--------FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           C          V   +LG+ +HA I+R GF     + N+L+DMY KC ++  A  +FD +
Sbjct: 251 CAQACASEFDVVRAFRLGQCIHALIVRKGFGSDQHVGNSLIDMYTKCMQMDEAVKVFDSL 310

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
            +   + WN +I+ + QA    KA E+   M+ S   PNEVT   +L+ C +A       
Sbjct: 311 PNISTVSWNILITGFGQAGSYAKALEVLNLMEESGSEPNEVTYSNMLASCIKA------- 363

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
                                        DV  A  +F +     +  WN +++GY    
Sbjct: 364 ----------------------------RDVLSARAMFDKISRPSVTTWNTLLSGYCQEE 395

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             ++ +  F  M+   V+P+  T   +L++CS  G++  G  V    V  L L   +   
Sbjct: 396 LHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGILDLGTQVHSASVRFL-LHNDMFVA 454

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK 559
             +VD+  + G +  A  +   M  R +++ W ++++   +H 
Sbjct: 455 SGLVDMYSKCGQIGIARIIFNRMTER-DVVCWNSMISGLAIHS 496



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 173/335 (51%), Gaps = 15/335 (4%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  I  P +T +N+L++ Y +       + ++  M+    + D  T+  IL +C+++ + 
Sbjct: 373 FDKISRPSVTTWNTLLSGYCQEELHQDTVELFRRMQHQNVQPDRTTLAVILSSCSRLGIL 432

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
            LG ++H  +++  L  D +V++ L+ MYS+CG +  AR +F+ M  RDVV W++MI G 
Sbjct: 433 DLGTQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARIIFNRMTERDVVCWNSMISGL 492

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
               L EEA +  ++MR   + P+E +  SM++  A ++ V  G+ IHA +V++  D+  
Sbjct: 493 AIHSLNEEAFDFFKQMRGNGMMPTESSYASMINSCARLSSVPQGRQIHAQIVKDGYDQN- 551

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            V + +ALIDMY+KCGN+  A+  F+ +   ++V+W  MI GY +     + V LF  M+
Sbjct: 552 -VYVGSALIDMYAKCGNMDDARVFFDCMVTKNIVAWNEMIHGYAQNGFGEKAVDLFEYML 610

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA------NALVDMYG 321
                P  +T ++++  C   G +       A    N  E +  +         L+D  G
Sbjct: 611 TTEQRPDGVTFIAVLTGCSHSGLVD-----EAIAFFNSMESTYGITPLAEHYTCLIDGLG 665

Query: 322 KCREIRSARTLFDGMKSK-DVMIWNAVISAYAQAH 355
           +   +     L D M  K D ++W  +++A A  H
Sbjct: 666 RAGRLVEVEALIDNMPCKDDPIVWEVLLAACAVHH 700


>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
 gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
          Length = 933

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 182/537 (33%), Positives = 297/537 (55%), Gaps = 42/537 (7%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           ++   +K   + D Y+ N  I   S    +  A   + +M   +V  ++ MI+G+ +   
Sbjct: 1   MYAVMVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQ 60

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
           P +ALE+  +M   ++ P+     S++     V+ +   +A+H  V RN  D    V + 
Sbjct: 61  PVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSH--VFVQ 118

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T+L+D YS  G +  + ++F+ + +  V +WT M+SG +R  +++   RLF  M + N  
Sbjct: 119 TSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRN-- 176

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
                                                LA  N L+D Y + RE+  A  L
Sbjct: 177 -------------------------------------LATWNTLIDGYARLREVDVAELL 199

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ M ++D++ W  +I+ Y+Q     +A  +F  M    + P+EVTM  ++S C   GAL
Sbjct: 200 FNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGAL 259

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           ++GK +H YI + G  +DV + +AL+DMYAKCG ++ +  +F +   +++  WN+++ G 
Sbjct: 260 DLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEGL 319

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
            +HG  EEAL  F  MER  +KPNG+TF+ +L+AC+HAGL+ EG+  F  M     + P 
Sbjct: 320 AVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPG 379

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           +EHYGCMVDLL +AGLL+EA ++I++M L PN ++WGALL+  KLH+N  + ++AA +++
Sbjct: 380 VEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGCKLHRNLEIAQVAANKLM 439

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE-PGFSSVEVNGLVHKF 628
            +EP N GY  L+ N+ A  NRW + A +R  MKE  V+K  PG S +E+   VH+F
Sbjct: 440 VLEPGNSGYYTLLVNMNAEVNRWGEAAKIRLTMKEQGVEKRCPGSSWIEMESQVHQF 496



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 207/419 (49%), Gaps = 43/419 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+++  ++++ +P  AL +Y  M +      ++T P+++KAC  V      + +HG   
Sbjct: 48  YNAMIKGFVQSYQPVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVW 107

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +NG D   +V  +L+  YS  G +  +  +FDEMP RDV +W+TM+ G  R G      +
Sbjct: 108 RNGFDSHVFVQTSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVG------D 161

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +    R  D+ P                             RN       +A    LID 
Sbjct: 162 MSSAGRLFDMMPD----------------------------RN-------LATWNTLIDG 186

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y++   +  A+ LFN++    ++SWT MI+ Y +     E + +F EM +  + P E+T+
Sbjct: 187 YARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTM 246

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            ++I  C  +G L LGK +H YI+++GF   + + +AL+DMY KC  +  +  +F  ++ 
Sbjct: 247 ATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLRE 306

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KW 397
           K++  WN+VI   A     ++A  +F  M+  K++PN VT V +LS C  AG +E G K 
Sbjct: 307 KNLFCWNSVIEGLAVHGYAEEALAMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKR 366

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMH 455
             +      +   V     +VD+ +K G +  A +L  +  +  +  +W A+++G  +H
Sbjct: 367 FASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSGCKLH 425


>gi|449529626|ref|XP_004171799.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g04860-like [Cucumis sativus]
          Length = 704

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 200/590 (33%), Positives = 326/590 (55%), Gaps = 19/590 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N+L++ Y +      A  ++  MR+   +    T+ +++ +C    +   GK IHG
Sbjct: 129 VVSWNALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHG 188

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K GLD D+ V NAL+ MY +C  L   + LF E+  + VVSW+TMI  + + GL  E
Sbjct: 189 LGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSE 248

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAI 211
           A+ V ++M    +  + V M+S++S     A+ + G     C+  +C   K+G    V++
Sbjct: 249 AMLVFKQMLEESVNANSVTMVSILS-----ANANTG-----CI--HCYATKIGLVENVSV 296

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
            T+L+  Y KCG +  A+ ++    + ++V+ T +IS Y    ++   VRL++ +   ++
Sbjct: 297 VTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDM 356

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
               + ++ +I    +   + +G   H Y +++G      +AN  + MY K   I +  +
Sbjct: 357 KLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFS 416

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           LF  M  K +  WN+VIS+ AQA     A  LF  M +S   P+ +T+  LLS C + G 
Sbjct: 417 LFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGN 476

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L  G+ LH YI +  L+++  + TALVDMY KCG ++ A  +F       +  WN++++G
Sbjct: 477 LHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISG 536

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           YG+ G    AL+ + +M   G+KPN ITF G+L AC+H GLV EG+  F  M    G+VP
Sbjct: 537 YGLFGFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIMKKKFGIVP 596

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
           + +H   MV +LGRAGL +EA   I++M   P+  VWGALL+A  +H+   +GE  A ++
Sbjct: 597 ESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGALLSACCIHQEVKLGESVAKKL 656

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
                 N G+ VLMSN+YA + RWNDVA +R++M+E+    E G S V +
Sbjct: 657 FFSNCSNGGFFVLMSNLYAASRRWNDVARIRKMMREM---GEDGCSGVSL 703



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 159/587 (27%), Positives = 277/587 (47%), Gaps = 39/587 (6%)

Query: 35  PLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTIL----KACAQVLMTHLG 90
           PL  +  L+   +K N  + +L I AF+  + +       P+      KA A  L TH  
Sbjct: 34  PLLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSS---FAPSFCSENEKAEANQLQTHF- 89

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
                  IK G D   YVS A + +YS+ G + +A+ LFD+ P +DVVSW+ +I GY R 
Sbjct: 90  -------IKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRC 142

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           G   +A ++  EMR  +  P +  ++S++           GK+IH   V+   D  L   
Sbjct: 143 GNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLD--LDSQ 200

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           +  AL+ MY KC +L   K LF  + + SVVSW  MI  + +    +E + +F +M+EE+
Sbjct: 201 VKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEES 260

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           V  + +T++S++      G       +H Y  + G   ++++  +LV  Y KC  I  A 
Sbjct: 261 VNANSVTMVSILSANANTG------CIHCYATKIGLVENVSVVTSLVCSYVKCGYIELAE 314

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            ++     K+++   A+IS YA+   +     L+  ++   ++ + V MVG++   T   
Sbjct: 315 LIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPD 374

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
            + +G   H Y  K GL +D ++    + MY+K  +++  + LF E   + +  WN++++
Sbjct: 375 HIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVIS 434

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
                G   +A+  F  M  SG  P+ IT   LL+AC   G +      F +++H   L 
Sbjct: 435 SCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGNLH-----FGEILHCYILR 489

Query: 511 PKIEHYG----CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
             ++  G     +VD+  + G +D A  + KSM   P +  W +L++   L    +   +
Sbjct: 490 NNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMK-EPCLASWNSLISGYGLFGFHNHALL 548

Query: 567 AATQILE--IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVK 611
             T+++E  I+P      +  S I A       V   R+  K ++ K
Sbjct: 549 CYTEMMEKGIKPN----KITFSGILAACTHGGLVEEGRKYFKIMKKK 591


>gi|356518094|ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g04860-like [Glycine max]
          Length = 714

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 197/588 (33%), Positives = 325/588 (55%), Gaps = 12/588 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+  Y ++  P  AL ++  M +     +  TI ++L +C +  +   G+ +H F I
Sbjct: 112 WNVLICGYSQHGHPHDALQLFVHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGI 171

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL  D  +SNAL  MY++C  L +++ LF EM  ++V+SW+TMI  Y + G  ++A+ 
Sbjct: 172 KAGLGLDPQLSNALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVL 231

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             +EM     +PS V M++++S  A      + + +H C +  C       ++ T+L+ +
Sbjct: 232 CFKEMLKEGWQPSPVTMMNLMSANA------VPETVH-CYIIKCGFTG-DASVVTSLVCL 283

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G    AK L+       ++S T +IS Y    E+   V  F + ++ ++ P  + +
Sbjct: 284 YAKQGFTDMAKLLYECYPTKDLISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVAL 343

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +S++          +G   H Y L+NG      +AN L+  Y +  EI +A +LF     
Sbjct: 344 ISVLHGISDPSHFAIGCAFHGYGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSE 403

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K ++ WN++IS   QA     A ELF  M +   +P+ +T+  LLS C + G L +G+ L
Sbjct: 404 KPLITWNSMISGCVQAGKSSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETL 463

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM--WNAMMAGYGMHG 456
           H YI +  ++V+    TAL+DMY KCG ++ A ++F      D C+  WN++++GY ++G
Sbjct: 464 HGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSI--NDPCLVTWNSIISGYSLYG 521

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
              +A   F  ++  G++P+ ITF+G+L AC+H GLV  G   F  M    GL+P ++HY
Sbjct: 522 LEHKAFGCFSKLQEQGLEPDKITFLGVLAACTHGGLVYAGMEYFRIMRKEYGLMPTLQHY 581

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            C+V LLGRAGL  EA E+I +M +RP+  VWGALL+A  + +   +GE  A  +  +  
Sbjct: 582 ACIVGLLGRAGLFKEAIEIINNMEIRPDSAVWGALLSACWIQQEVKLGECLAKNLFLLNY 641

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
           +N G+ V +SN+YA+  RW+DVA VR +M++       G S +EV  L
Sbjct: 642 KNGGFYVSLSNLYAIVGRWDDVARVRDMMRDSGGDGSSGVSVIEVTPL 689



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 140/539 (25%), Positives = 267/539 (49%), Gaps = 29/539 (5%)

Query: 53  SSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG---------KEIHGFAIKNGLD 103
           SSAL I+  + ++ +  ++ T   ++KAC     +             +I    +K G+D
Sbjct: 16  SSALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQLLKRGID 75

Query: 104 GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
              YV+ ALI  Y + G    AR LF+++P+ DVVSW+ +I GY + G P +AL++   M
Sbjct: 76  QFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLFVHM 135

Query: 164 RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCG 223
                RP++  + S++           G+++HA  ++      L   ++ AL  MY+KC 
Sbjct: 136 LRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIK--AGLGLDPQLSNALTSMYAKCD 193

Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLII 283
           +L  ++ LF  + + +V+SW  MI  Y +    ++ V  F EM++E   PS +T+++L+ 
Sbjct: 194 DLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMNLM- 252

Query: 284 ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
                    + + +H YI++ GF    ++  +LV +Y K      A+ L++   +KD++ 
Sbjct: 253 -----SANAVPETVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPTKDLIS 307

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
              +IS+Y++   ++ A E FI      ++P+ V ++ +L   ++     +G   H Y  
Sbjct: 308 LTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHGYGL 367

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
           K GL  D ++   L+  Y++  ++  A  LF +   + +  WN+M++G    G   +A+ 
Sbjct: 368 KNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSDAME 427

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP--KIEHY--GCM 519
            F  M   G KP+ IT   LL+ C   G +  G++     +HG  L    K+E +    +
Sbjct: 428 LFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGET-----LHGYILRNNVKVEDFTGTAL 482

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH--KNPSMGEIAATQILEIEP 576
           +D+  + G LD A ++  S+   P ++ W ++++   L+  ++ + G  +  Q   +EP
Sbjct: 483 IDMYTKCGRLDYAEKIFYSIN-DPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEP 540



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 162/318 (50%), Gaps = 6/318 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L     +++SY +  +  SA+  +    K   + D   + ++L   +      +G   HG
Sbjct: 305 LISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHG 364

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + +KNGL  D  V+N LI  YS    +++A  LF +   + +++W++MI G  + G   +
Sbjct: 365 YGLKNGLTNDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSD 424

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+E+  +M     +P  + + S++S    +  + +G+ +H  ++RN  + K+     TAL
Sbjct: 425 AMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRN--NVKVEDFTGTAL 482

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           IDMY+KCG L YA+++F  +N   +V+W  +ISGY      ++    F+++ E+ + P +
Sbjct: 483 IDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEHKAFGCFSKLQEQGLEPDK 542

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRN--GFEFSLAMANALVDMYGKCREIRSARTLF 333
           IT L ++  C   GGL      +  I+R   G   +L     +V + G+    + A  + 
Sbjct: 543 ITFLGVLAACTH-GGLVYAGMEYFRIMRKEYGLMPTLQHYACIVGLLGRAGLFKEAIEII 601

Query: 334 DGMKSK-DVMIWNAVISA 350
           + M+ + D  +W A++SA
Sbjct: 602 NNMEIRPDSAVWGALLSA 619



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 124/243 (51%), Gaps = 11/243 (4%)

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIEC----------GFVGGLQLGKWLHAYILR 303
           ++ +  + +F ++++ +  P+ +T   LI  C               LQ+ + +   +L+
Sbjct: 13  HDASSALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQ-IQTQLLK 71

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
            G +  L +  AL+D Y K      AR LF+ + S DV+ WN +I  Y+Q      A +L
Sbjct: 72  RGIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQL 131

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F+HM     RPN+ T+  LL  C        G+ +H +  K GL +D  L  AL  MYAK
Sbjct: 132 FVHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAK 191

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
           C D+  +  LF E   +++  WN M+  YG +G  ++A++ F +M + G +P+ +T + L
Sbjct: 192 CDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMNL 251

Query: 484 LNA 486
           ++A
Sbjct: 252 MSA 254



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 81/146 (55%)

Query: 35  PLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           PL  +NS+++  ++  K S A+ ++  M   G + D  TI ++L  C Q+    +G+ +H
Sbjct: 405 PLITWNSMISGCVQAGKSSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGYLRIGETLH 464

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           G+ ++N +  + +   ALI MY++CG L  A  +F  + +  +V+W+++I GY   GL  
Sbjct: 465 GYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGYSLYGLEH 524

Query: 155 EALEVMREMRFMDIRPSEVAMISMVS 180
           +A     +++   + P ++  + +++
Sbjct: 525 KAFGCFSKLQEQGLEPDKITFLGVLA 550



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 13/210 (6%)

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM----GKWLH-----TYIEKQ 405
           H    A  +F  +  S   PN +T   L+  C  + +         WL      T + K+
Sbjct: 13  HDASSALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQLLKR 72

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
           G++  + + TAL+D Y K G    A +LF +    D+  WN ++ GY  HG   +AL  F
Sbjct: 73  GIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLF 132

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLG 524
           V M R   +PN  T   LL +C    L  +G+SV    +  GLGL P++ +   +  +  
Sbjct: 133 VHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSN--ALTSMYA 190

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +   L+ +  + + M  + N+I W  ++ A
Sbjct: 191 KCDDLEASQLLFQEMGEK-NVISWNTMIGA 219


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 174/440 (39%), Positives = 274/440 (62%), Gaps = 4/440 (0%)

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           G+ +HA +++ C +    V + T LI +Y+KC  L  A+++ + + + +VVSWT MISGY
Sbjct: 29  GQRVHAHMIKTCYEPP--VYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGY 86

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
            +    +E + LF EM+     P+E T  +++  C    G QLG+ +H+ +++  FE  +
Sbjct: 87  SQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHI 146

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
            + ++L+DMY K  +I  AR +FDG+  +DV+   A+IS YAQ    ++A +LF  ++  
Sbjct: 147 FVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQRE 206

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
            +R N VT   +L+  +   AL+ G+ +H+++ +  L   V+L+ +L+DMY+KCG +  +
Sbjct: 207 GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYS 266

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM-ERSGVKPNGITFIGLLNACSH 489
            R+F     R +  WNAM+ GY  HG G EA+  F  M E + VKP+ +TF+ +L+ CSH
Sbjct: 267 RRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSH 326

Query: 490 AGLVTEGKSVFDKMVHGL-GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
            G+   G  +F +MV+   G  P+IEHYGC+VDL GRAG ++EA E IK MP  P   +W
Sbjct: 327 GGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIW 386

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
           G+LL A ++H+N  +GE  A ++LEIE +N G  V++SN+YA A RW+DV  VR +MKE 
Sbjct: 387 GSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEK 446

Query: 609 RVKKEPGFSSVEVNGLVHKF 628
            V KEPG S +E++  +H F
Sbjct: 447 AVIKEPGRSWIELDQTLHTF 466



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 205/397 (51%), Gaps = 10/397 (2%)

Query: 65  NGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVS 124
            G EV+     ++L  C        G+ +H   IK   +   Y+   LI +Y++C  L  
Sbjct: 4   QGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGD 63

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           AR + DEMP R+VVSW+ MI GY + G   EAL +  EM      P+E    ++++    
Sbjct: 64  ARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTS 123

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
            +   LG+ IH+ V++   +    + + ++L+DMY+K G +  A+++F+ L +  VVS T
Sbjct: 124 SSGFQLGRQIHSLVIKTSFESH--IFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCT 181

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
            +ISGY +     E + LF  +  E +  + +T  S++     +  L  G+ +H+++LR 
Sbjct: 182 AIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRA 241

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
              F + + N+L+DMY KC  +  +R +FD M  + V+ WNA++  Y++     +A ELF
Sbjct: 242 KLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELF 301

Query: 365 IHMK-VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE----KQGLEVDVILKTALVD 419
             MK  +KV+P+ VT + +LS C+  G  + G  L  + E    K G E ++     +VD
Sbjct: 302 KLMKEENKVKPDSVTFLAVLSGCSHGGMEDRG--LEIFYEMVNQKDGFEPEIEHYGCVVD 359

Query: 420 MYAKCGDVNGAYRLFSEAIYRDI-CMWNAMMAGYGMH 455
           ++ + G V  A+    +  +     +W +++    +H
Sbjct: 360 LFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVH 396



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 174/317 (54%), Gaps = 8/317 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + ++++ Y +    S AL+++  M  +G+  + FT  T+L +C       LG++IH   I
Sbjct: 79  WTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVI 138

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K   +   +V ++L+ MY++ G +  AR +FD +P RDVVS + +I GY + GL EEAL+
Sbjct: 139 KTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALD 198

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R ++   +R + V   S+++  + +A +D G+ +H+ V+R        V +  +LIDM
Sbjct: 199 LFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLR--AKLPFYVVLQNSLIDM 256

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN-VFPSEIT 277
           YSKCG+L Y++++F+ + + +V+SW  M+ GY +     E V LF  M EEN V P  +T
Sbjct: 257 YSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVT 316

Query: 278 ILSLIIECGFVGGLQ---LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            L+++  C   GG++   L  +      ++GFE  +     +VD++G+   +  A     
Sbjct: 317 FLAVLSGCSH-GGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIK 375

Query: 335 GMK-SKDVMIWNAVISA 350
            M       IW +++ A
Sbjct: 376 KMPFEPTAAIWGSLLGA 392



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 148/283 (52%), Gaps = 10/283 (3%)

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           S++ EC     ++ G+ +HA++++  +E  + +   L+ +Y KCR +  AR + D M  +
Sbjct: 15  SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 74

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           +V+ W A+IS Y+Q     +A  LF+ M +S   PNE T   +L+ CT +   ++G+ +H
Sbjct: 75  NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 134

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
           + + K   E  + + ++L+DMYAK G +  A R+F     RD+    A+++GY   G  E
Sbjct: 135 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDE 194

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY--- 516
           EAL  F  ++R G++ N +T+  +L A S    +  G     + VH   L  K+  Y   
Sbjct: 195 EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHG-----RQVHSHVLRAKLPFYVVL 249

Query: 517 -GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
              ++D+  + G L  +  +  SMP R  +I W A+L     H
Sbjct: 250 QNSLIDMYSKCGSLTYSRRIFDSMPER-TVISWNAMLVGYSKH 291


>gi|357164322|ref|XP_003580018.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Brachypodium distachyon]
          Length = 593

 Score =  353 bits (907), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 176/441 (39%), Positives = 270/441 (61%), Gaps = 5/441 (1%)

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           G+ +HA   +     +L   +  AL+ +Y  CG    A+++F+ +    VVSWT ++S +
Sbjct: 132 GRQVHAVAEKGGFLGRL--PVRNALVTLYGVCGECGDARRVFDEMASRDVVSWTALVSAF 189

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
           +R     E + L  +M   +V P+E T+  +++ CG +G  + GK +H + LR   +  L
Sbjct: 190 VRGGRFAEALVLVGQM---DVVPNEGTLACVLVACGRLGAARAGKAVHGWYLRRESDLKL 246

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
            + NA++DMY KC ++  AR +FD +  +DV+ W  +IS   Q     KA E+F  M+ S
Sbjct: 247 IVGNAVLDMYVKCEKLDLARRVFDRLLVRDVISWTIMISGLVQCKLPSKALEVFNEMQKS 306

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
           +V+P++V +  +LS CT  GALE G+W+H YIE++G+E DV + T+LVDMYAKCG +  +
Sbjct: 307 RVKPDKVVLSTVLSACTSLGALESGRWVHEYIERKGIEWDVHVGTSLVDMYAKCGCLETS 366

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
             +F +   +++  WNA++ G+ +HG G EAL  F  M  SG+ PN ++FI +L AC H+
Sbjct: 367 LSIFRKMPLKNLSSWNALINGFALHGHGREALEHFDRMVASGLAPNEVSFIIVLGACCHS 426

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           GLV EG  +F+ M +   L P  EHYG +VDLLGRAGL+ EA+ + K+MP+RP +  WGA
Sbjct: 427 GLVQEGLQLFESMKNSYKLSPWEEHYGSVVDLLGRAGLIHEAYSVTKAMPMRPAVFTWGA 486

Query: 551 LLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRV 610
           LL+A + H+     +     + E+E    G   L+SNIYAV +RW DV  VR +M E  +
Sbjct: 487 LLSACQAHRQVDFSQQILRHVHELESSESGVYALLSNIYAVNHRWADVKRVRGLMSEKGL 546

Query: 611 KKEPGFSSVEVNGLVHKFIRG 631
           +KEPG S +EVNG   +F+ G
Sbjct: 547 QKEPGSSVIEVNGKTSEFVVG 567



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/429 (31%), Positives = 229/429 (53%), Gaps = 17/429 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFM----RKNGSEVDNFTIPTILKACAQVLMTHL----- 89
           +N+L++    + +PSSA   +A +    R      D +T+P  LKACA++          
Sbjct: 71  FNALISHLTLSGEPSSAFRTFAALLAAGRGEPRRPDGYTLPATLKACARLGAGGDDGGLR 130

Query: 90  -GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
            G+++H  A K G  G   V NAL+ +Y  CG    AR +FDEM +RDVVSW+ ++  + 
Sbjct: 131 EGRQVHAVAEKGGFLGRLPVRNALVTLYGVCGECGDARRVFDEMASRDVVSWTALVSAFV 190

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           RGG   EAL ++ +   MD+ P+E  +  ++     +     GKA+H   +R   D KL 
Sbjct: 191 RGGRFAEALVLVGQ---MDVVPNEGTLACVLVACGRLGAARAGKAVHGWYLRRESDLKL- 246

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
             +  A++DMY KC  L  A+++F+RL    V+SWT+MISG ++C   ++ + +F EM +
Sbjct: 247 -IVGNAVLDMYVKCEKLDLARRVFDRLLVRDVISWTIMISGLVQCKLPSKALEVFNEMQK 305

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
             V P ++ + +++  C  +G L+ G+W+H YI R G E+ + +  +LVDMY KC  + +
Sbjct: 306 SRVKPDKVVLSTVLSACTSLGALESGRWVHEYIERKGIEWDVHVGTSLVDMYAKCGCLET 365

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           + ++F  M  K++  WNA+I+ +A      +A E F  M  S + PNEV+ + +L  C  
Sbjct: 366 SLSIFRKMPLKNLSSWNALINGFALHGHGREALEHFDRMVASGLAPNEVSFIIVLGACCH 425

Query: 389 AGALEMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD-ICMWN 446
           +G ++ G  L   ++    L        ++VD+  + G ++ AY +      R  +  W 
Sbjct: 426 SGLVQEGLQLFESMKNSYKLSPWEEHYGSVVDLLGRAGLIHEAYSVTKAMPMRPAVFTWG 485

Query: 447 AMMAGYGMH 455
           A+++    H
Sbjct: 486 ALLSACQAH 494



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 181/349 (51%), Gaps = 11/349 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +LV+++++  + + AL +   M    +E    T+  +L AC ++     GK +HG+ +
Sbjct: 182 WTALVSAFVRGGRFAEALVLVGQMDVVPNE---GTLACVLVACGRLGAARAGKAVHGWYL 238

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +   D    V NA++ MY +C  L  AR +FD +  RDV+SW+ MI G  +  LP +ALE
Sbjct: 239 RRESDLKLIVGNAVLDMYVKCEKLDLARRVFDRLLVRDVISWTIMISGLVQCKLPSKALE 298

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V  EM+   ++P +V + +++S    +  ++ G+ +H  + R  K  +  V + T+L+DM
Sbjct: 299 VFNEMQKSRVKPDKVVLSTVLSACTSLGALESGRWVHEYIER--KGIEWDVHVGTSLVDM 356

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG L  +  +F ++   ++ SW  +I+G+       E +  F  M+   + P+E++ 
Sbjct: 357 YAKCGCLETSLSIFRKMPLKNLSSWNALINGFALHGHGREALEHFDRMVASGLAPNEVSF 416

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSL--AMANALVDMYGKCREIRSARTLFDGM 336
           + ++  C   G +Q G  L    ++N ++ S       ++VD+ G+   I  A ++   M
Sbjct: 417 IIVLGACCHSGLVQEGLQLFES-MKNSYKLSPWEEHYGSVVDLLGRAGLIHEAYSVTKAM 475

Query: 337 KSKD-VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
             +  V  W A++SA      +D + ++  H  V ++  +E  +  LLS
Sbjct: 476 PMRPAVFTWGALLSACQAHRQVDFSQQILRH--VHELESSESGVYALLS 522



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 80/145 (55%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           ++  +  +  +++  ++   PS AL ++  M+K+  + D   + T+L AC  +     G+
Sbjct: 273 LVRDVISWTIMISGLVQCKLPSKALEVFNEMQKSRVKPDKVVLSTVLSACTSLGALESGR 332

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            +H +  + G++ D +V  +L+ MY++CG L ++  +F +MP +++ SW+ +I G+   G
Sbjct: 333 WVHEYIERKGIEWDVHVGTSLVDMYAKCGCLETSLSIFRKMPLKNLSSWNALINGFALHG 392

Query: 152 LPEEALEVMREMRFMDIRPSEVAMI 176
              EALE    M    + P+EV+ I
Sbjct: 393 HGREALEHFDRMVASGLAPNEVSFI 417



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/191 (28%), Positives = 81/191 (42%), Gaps = 18/191 (9%)

Query: 324 REIRSARTLFDGMKS-----KDVMIWNAVISAYAQAHCIDKAFELFIHM----KVSKVRP 374
           R + SAR   D + +          +NA+IS    +     AF  F  +    +    RP
Sbjct: 46  RHLASARAPADAVHALLRLRASAHPFNALISHLTLSGEPSSAFRTFAALLAAGRGEPRRP 105

Query: 375 NEVTMVGLLSLCTEAGALEM------GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
           +  T+   L  C   GA         G+ +H   EK G    + ++ ALV +Y  CG+  
Sbjct: 106 DGYTLPATLKACARLGAGGDDGGLREGRQVHAVAEKGGFLGRLPVRNALVTLYGVCGECG 165

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A R+F E   RD+  W A+++ +   G   EAL+    M+   V PN  T   +L AC 
Sbjct: 166 DARRVFDEMASRDVVSWTALVSAFVRGGRFAEALVLVGQMD---VVPNEGTLACVLVACG 222

Query: 489 HAGLVTEGKSV 499
             G    GK+V
Sbjct: 223 RLGAARAGKAV 233


>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial [Vitis vinifera]
          Length = 773

 Score =  353 bits (906), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 210/599 (35%), Positives = 327/599 (54%), Gaps = 19/599 (3%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           + N+ NP +  +N++++ + +++    ALN    M   G   D  T  T+L  C+     
Sbjct: 136 FENLNNPDIVSWNTVLSGFQRSD---DALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGF 192

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
             G ++H   +K GLD + +V NALI MYS C  LV AR +FDEM N+D+VSW+ M+ GY
Sbjct: 193 IFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGY 252

Query: 148 -HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
              G    EA+ V  EM    ++   V+    +S      + +LG+ IH+  V+   D  
Sbjct: 253 AQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTH 312

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE--GVRLFA 264
             V +   LI  YSKC ++  AK +F  +   +VVSWT MIS       I+E     LF 
Sbjct: 313 --VKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMIS-------ISEEDATSLFN 363

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           EM  + V+P+++T + LI        ++ G+ +H   ++  F   L ++N+L+ MY K  
Sbjct: 364 EMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFE 423

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            +  +  +F+ +  ++++ WN++IS YAQ     +A + F+   + + RPNE T   +LS
Sbjct: 424 SMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLS-ALMESRPNEFTFGSVLS 482

Query: 385 LCTEAGALEM--GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
               A A+ M  G+  H++I K GL  + I+ +AL+DMYAK G +  +  +FSE   ++ 
Sbjct: 483 SIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNE 542

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             W A+++ +  HG  E  +  F DMER GVKP+ ITF+ ++ AC   G+V  G  +F+ 
Sbjct: 543 VAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNS 602

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
           MV    + P  EHY  MVD+LGRAG L EA E +  +P    + V  +LL A ++H N  
Sbjct: 603 MVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVD 662

Query: 563 MGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
           M +  A  ++E+EP   G  VLMSN+YA    W  VA +R+ M+E  V+KE GFS V+V
Sbjct: 663 MAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEWEKVAKIRKGMRERGVRKEIGFSWVDV 721



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 148/538 (27%), Positives = 274/538 (50%), Gaps = 29/538 (5%)

Query: 34  NPLTRYNSL---VTSYIKNNKPSSALNIYAFMRKNG--SEVDNFTIPTILKACAQVLMTH 88
           +P T   SL   + + ++ N    AL+++    + G    +D  T+  +LKAC     + 
Sbjct: 38  SPQTTIASLNRSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACCGD--SK 95

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           LG +IH FAI +G      V N+L+ MY + G    A  +F+ + N D+VSW+T++ G+ 
Sbjct: 96  LGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQ 155

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           R    ++AL     M F  +    V   ++++  +D      G  +H+ +++   D +  
Sbjct: 156 RS---DDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCE-- 210

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR-CNEINEGVRLFAEMI 267
           V +  ALI MYS+C  L  A+++F+ +    +VSW  M+SGY +  N   E + +F EM+
Sbjct: 211 VFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEML 270

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
           +E +    ++    I  CG     +LG+ +H+  ++ G++  + + N L+  Y KC +I 
Sbjct: 271 KEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIE 330

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            A+ +F+ +  ++V+ W  +IS   +      A  LF  M+   V PN+VT VGL+   T
Sbjct: 331 DAKLVFESIIDRNVVSWTTMISISEE-----DATSLFNEMRRDGVYPNDVTFVGLIHAIT 385

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
               +E G+ +H    K     ++ +  +L+ MYAK   ++ + ++F E  YR+I  WN+
Sbjct: 386 MKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNS 445

Query: 448 MMAGYGMHGCGEEALIFFVD--MERSGVKPNGITFIGLLNACSHAGLVT--EGKSVFDKM 503
           +++GY  +G  +EAL  F+   ME    +PN  TF  +L++ + A  ++   G+     +
Sbjct: 446 LISGYAQNGLWQEALQTFLSALMES---RPNEFTFGSVLSSIASAEAISMRHGQRCHSHI 502

Query: 504 VH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
           +  GL   P +     ++D+  + G + E+  +    PL+ N + W A+++A   H +
Sbjct: 503 LKLGLNTNPIVS--SALLDMYAKRGSICESLGVFSETPLK-NEVAWTAIISAHARHGD 557


>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score =  353 bits (906), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 197/592 (33%), Positives = 330/592 (55%), Gaps = 5/592 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNF-TIPTILKACAQVLMTHLGKEIHGFA 97
           +N+++     N   + A N Y +M        N  ++ ++L   A +    + + IH ++
Sbjct: 228 WNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYS 287

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K GLD      NAL+  Y +CGS+ +   +F+E   ++ VSW+++I G    G   +AL
Sbjct: 288 VKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDAL 347

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
              R M     +P+ V + S++ +  ++     GK IH   +R     +  + IA +LID
Sbjct: 348 NAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMR--MGTETDIFIANSLID 405

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+K G+   A  +F+ L++ ++VSW  MI+ Y       E +R   +M E    P+ +T
Sbjct: 406 MYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVT 465

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             +++  C  +G L  GK +HA  +R G    L ++N+L+DMY KC  + SAR +F+  +
Sbjct: 466 FTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSR 525

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KD + +N +I  Y++     ++  LF  M++   +P+ V+ VG++S C    AL+ GK 
Sbjct: 526 -KDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKE 584

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H    +  L   + +  +L+D Y KCG ++ A RLF++ +++D+  WN M+ GYGM G 
Sbjct: 585 VHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGE 644

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            E A+  F  M    V+ + +++I +L+ACSH GLV  G   F +M+    L P   HY 
Sbjct: 645 LETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEML-AQRLEPTEMHYT 703

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLLGRAG ++EA ++I+ +P+ P+  +WGALL A +++ N  +G  AA  + E++PQ
Sbjct: 704 CMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQ 763

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           + GY +L+SNIYA   RW++   +R +MK    KK PG S V++   VH F+
Sbjct: 764 HCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAFV 815



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 225/471 (47%), Gaps = 16/471 (3%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMPN- 134
           +L  C++V      K++H   I NG L     +  +LI  Y++     S   LF++    
Sbjct: 60  LLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQTFQN 119

Query: 135 -RDVVSWSTMIRGYH---RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
            R    W+T+IR +     G    +  E    M    ++  +     ++ L +D  D+  
Sbjct: 120 CRTAFLWNTLIRAHSIAWNGTF--DGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDICK 177

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           G  +H  V +   D    V +   L+ +Y  CG L  A++LF+ + +  VVSW  +I G 
Sbjct: 178 GMEVHGVVFKLGFDTD--VYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTII-GL 234

Query: 251 IRCN-EINEGVRLFAEMIEENVF-PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
           +  N +  E    +  MI  +V  P+ ++++SL+     +   ++ + +H Y ++ G + 
Sbjct: 235 LSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYSVKVGLDS 294

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA-QAHCIDKAFELFIHM 367
            +   NALVD YGKC  +++   +F+    K+ + WN++I+  A +  C D A   F  M
Sbjct: 295 QVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWD-ALNAFRMM 353

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
             +  +PN VT+  +L +  E    + GK +H +  + G E D+ +  +L+DMYAK G  
Sbjct: 354 IDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHS 413

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             A  +F     R+I  WNAM+A Y ++    EA+ F + M+ +G  PN +TF  +L AC
Sbjct: 414 TEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPAC 473

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           +  G +  GK +    V  +GL   +     ++D+  + G L  A  +  +
Sbjct: 474 ARLGFLGPGKEIHAMGVR-IGLTSDLFVSNSLIDMYAKCGCLHSARNVFNT 523


>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
          Length = 864

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 187/600 (31%), Positives = 327/600 (54%), Gaps = 2/600 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + + +   ++N + +  + ++  M++ G  V      +  ++CA +      +++H  AI
Sbjct: 220 WGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAI 279

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KN    D  V  A++ +Y++ G+LV AR  F  +P+ +V + + M+ G  R GL  EA++
Sbjct: 280 KNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQ 339

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + + M    +    +++  + S  A+V     G  +H   V++  D  + V +  A++D+
Sbjct: 340 LFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFD--VDVCVRNAILDL 397

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC  L  A  +F  + Q   VSW  +I+   +     + +    EM+   + P + T 
Sbjct: 398 YGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTY 457

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  L+ G  +H   +++G      +++ +VDMY KC  I  A+ L D +  
Sbjct: 458 GSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGG 517

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           ++++ WN++IS ++     ++A   F  M    V+P+  T   +L  C     +E+GK +
Sbjct: 518 QELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQI 577

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I KQ +  D  + + LVDMYAKCG++  +  +F +A   D   WNAM+ GY +HG G
Sbjct: 578 HGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQG 637

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F  M+R+ V PN  TF+ +L ACSH GL+ +G   F  M     LVP++EH+ C
Sbjct: 638 LEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFAC 697

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVD+LGR+    EA E I+SMP+  + +VW  LL+  K+ ++  + E AA+ +L ++P +
Sbjct: 698 MVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPDD 757

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
               +L+SN+YA + +W DV+  RR+M++ R++KEPG S +EV   +H F+ G  V+ +S
Sbjct: 758 ASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEVQSEMHGFLVGDKVHPRS 817



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 142/526 (26%), Positives = 260/526 (49%), Gaps = 16/526 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L++ Y ++    +++ +   M + G  +D  T+  +LK+C  +    LG +IH  A+
Sbjct: 119 WNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAV 178

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+ D    +AL+ MY +C SL  A   F  M  R+ VSW   I G  +       +E
Sbjct: 179 KTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGME 238

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+ + +  S+ A  S     A +  +   + +HA  ++N         + TA++D+
Sbjct: 239 LFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDR--VVGTAIVDV 296

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K GNL  A++ F  L  ++V +   M+ G +R     E ++LF  M    V    I++
Sbjct: 297 YAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISL 356

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
             +   C  V G   G  +H   +++GF+  + + NA++D+YGKC+ +  A  +F  M+ 
Sbjct: 357 SGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQ 416

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +D + WNA+I+A  Q  C +        M  S + P++ T   +L  C    +LE G  +
Sbjct: 417 RDSVSWNAIIAALEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVV 476

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    K GL +D  + + +VDMY KCG +  A +L      +++  WN++++G+ +    
Sbjct: 477 HGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQS 536

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG- 517
           EEA  FF +M   GVKP+  T+  +L+ C++   +  GK +  +++       K E  G 
Sbjct: 537 EEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQII-------KQEMLGD 589

Query: 518 -----CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
                 +VD+  + G + ++  M +    + + + W A++    LH
Sbjct: 590 EYISSTLVDMYAKCGNMPDSLLMFEK-ARKLDFVSWNAMICGYALH 634



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/565 (26%), Positives = 260/565 (46%), Gaps = 49/565 (8%)

Query: 69  VDNFTIPTILKACAQVLMTHL--GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSAR 126
           V   T   + + CA    + L  G+  H   + +G     +VSN L+QMY+ CG    A 
Sbjct: 15  VATATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAH 74

Query: 127 YLFDEMPNRD-------------------------------VVSWSTMIRGYHRGGLPEE 155
            +FD MP+RD                               VVSW+T+I GY + G+   
Sbjct: 75  GVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRN 134

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           ++ +  EM    +      +  ++     + D+ LG  IHA  V+   +    V   +AL
Sbjct: 135 SVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETD--VRAGSAL 192

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY KC +L  A + F+ + + + VSW   I+G ++  +   G+ LF +M    +  S+
Sbjct: 193 VDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQ 252

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
               S    C  +  L   + LHA+ ++N F     +  A+VD+Y K   +  AR  F G
Sbjct: 253 PAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIG 312

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +   +V   NA++    +     +A +LF  M  S V  + +++ G+ S C E      G
Sbjct: 313 LPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQG 372

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H    K G +VDV ++ A++D+Y KC  +  AY +F E   RD   WNA++A    +
Sbjct: 373 LQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQN 432

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACS-----HAGLVTEGKSVFDKMVHGLGLV 510
            C E+ +    +M RSG++P+  T+  +L AC+       GLV  GK++      GLGL 
Sbjct: 433 ECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKS----GLGLD 488

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
             +     +VD+  + G + EA ++   +  +  ++ W ++++   L K     +   ++
Sbjct: 489 AFVS--STVVDMYCKCGAITEAQKLHDRIGGQ-ELVSWNSIISGFSLTKQSEEAQRFFSE 545

Query: 571 ILE--IEPQNYGYNVLMSNIYAVAN 593
           +L+  ++P ++ Y  ++     +A 
Sbjct: 546 MLDMGVKPDHFTYATVLDTCANLAT 570



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 220/467 (47%), Gaps = 28/467 (5%)

Query: 10  LEQTRQCHAHIIKTHFKFSYT-------------NIINPLTRY-----------NSLVTS 45
           L   RQ HAH IK  F                  N+++    +           N+++  
Sbjct: 268 LSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVG 327

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
            ++    + A+ ++ FM ++G   D  ++  +  ACA+V     G ++H  A+K+G D D
Sbjct: 328 LVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVD 387

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
             V NA++ +Y +C +LV A  +F EM  RD VSW+ +I    +    E+ +  + EM  
Sbjct: 388 VCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEMLR 447

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
             + P +    S++   A +  ++ G  +H   +++     L   +++ ++DMY KCG +
Sbjct: 448 SGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKS--GLGLDAFVSSTVVDMYCKCGAI 505

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
             A++L +R+    +VSW  +ISG+    +  E  R F+EM++  V P   T  +++  C
Sbjct: 506 TEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTC 565

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
             +  ++LGK +H  I++        +++ LVDMY KC  +  +  +F+  +  D + WN
Sbjct: 566 ANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWN 625

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEK 404
           A+I  YA      +A E+F  M+ + V PN  T V +L  C+  G L+ G ++ H    +
Sbjct: 626 AMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSR 685

Query: 405 QGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMA 450
             L   +     +VD+  +      A     S  I  D  +W  +++
Sbjct: 686 YKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLS 732


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 201/536 (37%), Positives = 301/536 (56%), Gaps = 32/536 (5%)

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           P+R   SW   +R   R     EA+    EM     RP   A  +++   + + D+  G+
Sbjct: 53  PSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGE 112

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLA------------YAK--------QLF 232
            IHA  V+        V +A  L++MY KCG +             YAK         LF
Sbjct: 113 QIHAAAVKFGYGSS-SVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALF 171

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
                  +VSW  MIS + + +  +E +  F  M+ E V    +TI S++  C  +  L 
Sbjct: 172 ESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLD 231

Query: 293 LGKWLHAYILRNG--FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
           +GK +HAY+LRN    E S  + +ALVDMY  CR++ S R +FD +  + + +WNA+IS 
Sbjct: 232 VGKEIHAYVLRNNDLIENSF-VGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISG 290

Query: 351 YAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEA-GALEMGKWLHTYIEKQGLE 408
           YA+    +KA  LFI M KV+ + PN  TM  ++  C  +  A+  GK +H Y  +  L 
Sbjct: 291 YARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLA 350

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            D+ + +ALVDMYAKCG +N + R+F+E   +++  WN ++   GMHG GEEAL  F +M
Sbjct: 351 SDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNM 410

Query: 469 ----ERSG-VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL 523
                R G  KPN +TFI +  ACSH+GL++EG ++F +M H  G+ P  +HY C+VDLL
Sbjct: 411 VAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLL 470

Query: 524 GRAGLLDEAHEMIKSMPLRPNMI-VWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYN 582
           GRAG L+EA+E++ +MP   + +  W +LL A ++H+N  +GE+AA  +L +EP    + 
Sbjct: 471 GRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHY 530

Query: 583 VLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           VL+SNIY+ A  WN    VR+ M+++ VKKEPG S +E    VHKF+ G + + +S
Sbjct: 531 VLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQS 586



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/494 (27%), Positives = 238/494 (48%), Gaps = 41/494 (8%)

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK----- 99
           S  ++N    A++ Y  M  +G+  DNF  P +LKA + +     G++IH  A+K     
Sbjct: 66  SRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGS 125

Query: 100 ----------------NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTM 143
                            G+    + +NAL+ MY++ G +  ++ LF+   +RD+VSW+TM
Sbjct: 126 SSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTM 185

Query: 144 IRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
           I  + +     EAL   R M    +    V + S++   + +  +D+GK IHA V+RN  
Sbjct: 186 ISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRN-N 244

Query: 204 DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
           D      + +AL+DMY  C  +   +++F+ +    +  W  MISGY R     + + LF
Sbjct: 245 DLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILF 304

Query: 264 AEMIE-ENVFPSEITILSLIIEC-GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
            EMI+   + P+  T+ S++  C   +  +  GK +HAY +RN     + + +ALVDMY 
Sbjct: 305 IEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYA 364

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM-----KVSKVRPNE 376
           KC  +  +R +F+ M +K+V+ WN +I A       ++A ELF +M     +  + +PNE
Sbjct: 365 KCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNE 424

Query: 377 VTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
           VT + + + C+ +G +  G    +      G+E        +VD+  + G +  AY L +
Sbjct: 425 VTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVN 484

Query: 436 --EAIYRDICMWNAMMAGYGMHG---CGEEALIFFVDMERSGVKPNGIT-FIGLLNACSH 489
              A +  +  W++++    +H     GE A    + +E     PN  + ++ L N  S 
Sbjct: 485 TMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLE-----PNVASHYVLLSNIYSS 539

Query: 490 AGLVTEGKSVFDKM 503
           AGL  +   V   M
Sbjct: 540 AGLWNKAMEVRKNM 553



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 173/326 (53%), Gaps = 13/326 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N++++S+ ++++ S AL  +  M   G E+D  TI ++L AC+ +    +GKEIH 
Sbjct: 179 MVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHA 238

Query: 96  FAIKNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           + ++N  L  +++V +AL+ MY  C  + S R +FD +  R +  W+ MI GY R GL E
Sbjct: 239 YVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDE 298

Query: 155 EALEVMREM-RFMDIRPSEVAMIS-MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
           +AL +  EM +   + P+   M S M +    +A +  GK IHA  +RN       + + 
Sbjct: 299 KALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASD--ITVG 356

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE--- 269
           +AL+DMY+KCG L  ++++FN +   +V++W V+I       +  E + LF  M+ E   
Sbjct: 357 SALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAEAGR 416

Query: 270 --NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREI 326
                P+E+T +++   C   G +  G  L   +  + G E +      +VD+ G+  ++
Sbjct: 417 GGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQL 476

Query: 327 RSARTLFDGMKSK--DVMIWNAVISA 350
             A  L + M ++   V  W++++ A
Sbjct: 477 EEAYELVNTMPAEFDKVGAWSSLLGA 502



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 129/251 (51%), Gaps = 15/251 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT-IPTILKACAQVLMT-HLGKEIHGF 96
           +N++++ Y +N     AL ++  M K    + N T + +++ AC   L     GKEIH +
Sbjct: 284 WNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAY 343

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
           AI+N L  D  V +AL+ MY++CG L  +R +F+EMPN++V++W+ +I      G  EEA
Sbjct: 344 AIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEA 403

Query: 157 LEVMREM-----RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
           LE+ + M     R  + +P+EV  I++ +  +    +  G  +   +  +   E      
Sbjct: 404 LELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHY 463

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQ--NSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
           A  ++D+  + G L  A +L N +    + V +W+ ++ G  R   I++ V L  E+  +
Sbjct: 464 A-CVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLL-GACR---IHQNVEL-GEVAAK 517

Query: 270 NVFPSEITILS 280
           N+   E  + S
Sbjct: 518 NLLHLEPNVAS 528


>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 684

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 197/592 (33%), Positives = 330/592 (55%), Gaps = 5/592 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNF-TIPTILKACAQVLMTHLGKEIHGFA 97
           +N+++     N   + A N Y +M        N  ++ ++L   A +    + + IH ++
Sbjct: 79  WNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRIHCYS 138

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K GLD      NAL+  Y +CGS+ +   +F+E   ++ VSW+++I G    G   +AL
Sbjct: 139 VKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDAL 198

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
              R M     +P+ V + S++ +  ++     GK IH   +R     +  + IA +LID
Sbjct: 199 NAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMR--MGTETDIFIANSLID 256

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+K G+   A  +F+ L++ ++VSW  MI+ Y       E +R   +M E    P+ +T
Sbjct: 257 MYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVT 316

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             +++  C  +G L  GK +HA  +R G    L ++N+L+DMY KC  + SAR +F+  +
Sbjct: 317 FTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFNTSR 376

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KD + +N +I  Y++     ++  LF  M++   +P+ V+ VG++S C    AL+ GK 
Sbjct: 377 -KDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKE 435

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H    +  L   + +  +L+D Y KCG ++ A RLF++ +++D+  WN M+ GYGM G 
Sbjct: 436 VHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGE 495

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            E A+  F  M    V+ + +++I +L+ACSH GLV  G   F +M+    L P   HY 
Sbjct: 496 LETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQYFSEML-AQRLEPTEMHYT 554

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLLGRAG ++EA ++I+ +P+ P+  +WGALL A +++ N  +G  AA  + E++PQ
Sbjct: 555 CMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIYGNVELGRRAAEHLFELKPQ 614

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           + GY +L+SNIYA   RW++   +R +MK    KK PG S V++   VH F+
Sbjct: 615 HCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSWVQIYDQVHAFV 666



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 155/501 (30%), Positives = 257/501 (51%), Gaps = 24/501 (4%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           M + G ++D+ T P +LK C+       G E+HG   K G D D YV N L+ +Y  CG 
Sbjct: 1   MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVS 180
           L  AR LFDEMP RDVVSW+T+I      G   EA      M     I+P+ V++IS++ 
Sbjct: 61  LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120

Query: 181 LFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
           + A + D ++ + IH   V+   D +  V    AL+D Y KCG++    Q+FN   + + 
Sbjct: 121 ISAALEDEEMTRRIHCYSVKVGLDSQ--VTTCNALVDAYGKCGSVKALWQVFNETVEKNE 178

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI-----IECGFVGGLQLGK 295
           VSW  +I+G        + +  F  MI+    P+ +TI S++     +EC      + GK
Sbjct: 179 VSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELEC-----FKAGK 233

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
            +H + +R G E  + +AN+L+DMY K      A T+F  +  ++++ WNA+I+ YA   
Sbjct: 234 EIHGFSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNR 293

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
              +A    I M+ +   PN VT   +L  C   G L  GK +H    + GL  D+ +  
Sbjct: 294 LPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSN 353

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           +L+DMYAKCG ++ A  +F+ +  +D   +N ++ GY       ++L  F +M   G KP
Sbjct: 354 SLIDMYAKCGCLHSARNVFNTS-RKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKP 412

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDE 531
           + ++F+G+++AC++   + +GK      VHG+ L   +  +      ++D   + G +D 
Sbjct: 413 DVVSFVGVISACANLAALKQGKE-----VHGVALRNHLYSHLFVSNSLLDFYTKCGRIDI 467

Query: 532 AHEMIKSMPLRPNMIVWGALL 552
           A  +   + L  ++  W  ++
Sbjct: 468 ACRLFNQI-LFKDVASWNTMI 487



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 163/316 (51%), Gaps = 4/316 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N+++ +Y  N  P  A+     M++ G   +  T   +L ACA++     GKEIH 
Sbjct: 279 IVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHA 338

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             ++ GL  D +VSN+LI MY++CG L SAR +F+    +D VS++ +I GY       +
Sbjct: 339 MGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN-TSRKDEVSYNILIIGYSETDDCLQ 397

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           +L +  EMR +  +P  V+ + ++S  A++A +  GK +H   +RN     L V  + +L
Sbjct: 398 SLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQGKEVHGVALRNHLYSHLFV--SNSL 455

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +D Y+KCG +  A +LFN++    V SW  MI GY    E+   + +F  M ++ V    
Sbjct: 456 LDFYTKCGRIDIACRLFNQILFKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDL 515

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           ++ ++++  C   G ++ G    + +L    E +      +VD+ G+   +  A  L   
Sbjct: 516 VSYIAVLSACSHGGLVERGWQYFSEMLAQRLEPTEMHYTCMVDLLGRAGFVEEAAKLIQQ 575

Query: 336 MK-SKDVMIWNAVISA 350
           +  + D  IW A++ A
Sbjct: 576 LPIAPDANIWGALLGA 591


>gi|115477555|ref|NP_001062373.1| Os08g0538800 [Oryza sativa Japonica Group]
 gi|50725675|dbj|BAD33141.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113624342|dbj|BAF24287.1| Os08g0538800 [Oryza sativa Japonica Group]
 gi|215697775|dbj|BAG91968.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 581

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 181/460 (39%), Positives = 280/460 (60%), Gaps = 13/460 (2%)

Query: 179 VSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNR 234
           +S  A V  +D+G   HA  +      KL +A    +  ALI+MYS C   A A+ + + 
Sbjct: 100 ISAAARVPSLDVGSQFHALSL------KLSLASDSFVLNALINMYSSCNYPASARLVLDS 153

Query: 235 LNQ--NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
             +  + VVSW  +I+GYIR    N+ ++ F +M +E V   E+T+L++++ C   G ++
Sbjct: 154 APRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMK 213

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
           +G   HA ++ NGFE +  + ++LV MY KC  +  AR +F+ M  ++V+ W ++I+   
Sbjct: 214 VGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCT 273

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
           Q+    +A +LF  M+++ V+ ++ T+  ++S C + GAL++G++LH Y +  GL  ++ 
Sbjct: 274 QSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELS 333

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME-RS 471
           +K +L+DMY+KCGDVN AY++F     RD+  W  M+ G+ M+G   EAL  F  ME   
Sbjct: 334 VKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGED 393

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
            V PN + F+G+L ACSH GLV +G   F +M     LVP+IEHYGCMVDLLGRA LL E
Sbjct: 394 KVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAE 453

Query: 532 AHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAV 591
           A + IK MP+ P+++VW +LL A +      + E AA +I ++EP+  G +VL+SN+YA 
Sbjct: 454 AEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYAT 513

Query: 592 ANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             RW DV  VR  M   R  K+PG S +EV+G +H+F  G
Sbjct: 514 TLRWVDVNNVRTGMGNSRTSKKPGCSFIEVDGCIHEFFAG 553



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/392 (32%), Positives = 215/392 (54%), Gaps = 19/392 (4%)

Query: 69  VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYL 128
           +DN+++   + A A+V    +G + H  ++K  L  D++V NALI MYS C    SAR +
Sbjct: 91  LDNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLV 150

Query: 129 FDEMPN--RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            D  P    DVVSW+T+I GY RGG+P +AL+   +M    +R  EV +++++   A   
Sbjct: 151 LDSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTG 210

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
            + +G   HA VV N    ++   I ++L+ MY+KCG +  A+++FNR+ + +VV WT M
Sbjct: 211 AMKVGSLCHALVVLN--GFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSM 268

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           I+G  +     E V LF +M    V   + TI +++  CG +G L LG++LHAY   +G 
Sbjct: 269 IAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGL 328

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
              L++ N+L+DMY KC ++  A  +F G+  +DV  W  +I  +A      +A +LF  
Sbjct: 329 GKELSVKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQ 388

Query: 367 MK-VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
           M+   KV PNEV  +G+L+ C+  G +E G   + +  +     +++ +   ++ Y    
Sbjct: 389 MEGEDKVMPNEVIFLGVLTACSHGGLVEQG---YHHFHRMSKVYNLVPR---IEHYGCMV 442

Query: 426 DVNGAYRLFSEA--------IYRDICMWNAMM 449
           D+ G  +L +EA        +  D+ +W +++
Sbjct: 443 DLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLL 474



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 173/318 (54%), Gaps = 11/318 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  YI+   P+ AL  +  M K    +D  T+  +L ACA+     +G   H   +
Sbjct: 164 WNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHALVV 223

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            NG + + Y+ ++L+ MY++CG +  AR +F+ MP R+VV W++MI G  + G  +EA++
Sbjct: 224 LNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKEAVD 283

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--VAIATALI 216
           + R+M+   ++  +  + ++VS    +  +DLG+ +HA     C    LG  +++  +LI
Sbjct: 284 LFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHA----YCDGHGLGKELSVKNSLI 339

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI-EENVFPSE 275
           DMYSKCG++  A Q+F+ L +  V +WTVMI G+       E + LFA+M  E+ V P+E
Sbjct: 340 DMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVMPNE 399

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEF--SLAMANALVDMYGKCREIRSARTLF 333
           +  L ++  C   GGL    + H + +   +     +     +VD+ G+ + +  A    
Sbjct: 400 VIFLGVLTACSH-GGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAEQFI 458

Query: 334 DGMK-SKDVMIWNAVISA 350
             M  + DV++W +++ A
Sbjct: 459 KDMPVAPDVVVWRSLLFA 476


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 210/624 (33%), Positives = 334/624 (53%), Gaps = 32/624 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT-HLGKEIHGFA 97
           +NSL+ +     +   AL+    M   G  + +FT+ ++L AC+ +     LG+E H FA
Sbjct: 130 FNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFA 189

Query: 98  IKNG-LDGDA-YVSNALIQMYSECGSLVSARYLF-----DEMPNRDVVSWSTMIRGYHRG 150
           +KNG LDGD  +  NAL+ MY+  G +  A+ LF      + P   VV+W+TM+    + 
Sbjct: 190 LKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQS 249

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           G   EA+EV+ +M    +RP  +   S +   + +  + LG+ +HA V+++  D      
Sbjct: 250 GRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKD-SDLAANSF 308

Query: 211 IATALIDMYSKCGNLAYAKQLFNRL--NQNSVVSWTVMISGYIRCNEINEGVRLFAEM-I 267
           +A+AL+DMY+    +  A+++F+ +      +  W  M+ GY +     E + LFA M  
Sbjct: 309 VASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEEALELFARMEA 368

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
           E  V PSE TI  ++  C         + +H Y+L+ G   +  + NAL+D+Y +  ++ 
Sbjct: 369 EAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDLYARLGDME 428

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS----------------- 370
           +AR +F  ++ +DV+ WN +I+       I  AF+L   M+                   
Sbjct: 429 AARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTEDGIAGTDE 488

Query: 371 -KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
             V PN VT++ LL  C    A   GK +H Y  +  L+ D+ + +ALVDMYAKCG +  
Sbjct: 489 EPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMYAKCGCLAL 548

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACS 488
           +  +F     R++  WN ++  YGMHG G+EA+  F  M  S   KPN +TFI  L ACS
Sbjct: 549 SRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTFIAALAACS 608

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM-PLRPNMIV 547
           H+G+V  G  +F  M    G+ P  + + C VD+LGRAG LDEA+ +I SM P    +  
Sbjct: 609 HSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSMEPGEQQVSA 668

Query: 548 WGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
           W + L A +LH+N  +GEIAA ++ ++EP    + VL+ NIY+ A  W   + VR  M++
Sbjct: 669 WSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSSEVRNRMRQ 728

Query: 608 IRVKKEPGFSSVEVNGLVHKFIRG 631
             V KEPG S +E++G++H+F+ G
Sbjct: 729 RGVSKEPGCSWIELDGVIHRFMAG 752



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 150/526 (28%), Positives = 260/526 (49%), Gaps = 44/526 (8%)

Query: 69  VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL--DGDAYVSNALIQMYSECGSLVSAR 126
           +D+F +P   K+ A +      + IHG A++  L       V+NAL+  Y+ CG L +A 
Sbjct: 57  LDHFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAAL 116

Query: 127 YLFDEMPNRDVVSWSTMIRG--YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
            LF+ MP+RD V+++++I      R  LP  AL+ +R+M       S   ++S++   + 
Sbjct: 117 ALFNAMPSRDAVTFNSLIAALCLFRRWLP--ALDALRDMLLEGHPLSSFTLVSVLLACSH 174

Query: 185 VA-DVDLGKAIHACVVRNC---KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS- 239
           +A D+ LG+  HA  ++N     DE+       AL+ MY++ G +  A+ LF  ++    
Sbjct: 175 LAEDLRLGREAHAFALKNGFLDGDERFAF---NALLSMYARLGLVDDAQMLFGSVDTTDS 231

Query: 240 ----VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
               VV+W  M+S  ++     E + +  +M+   V P  IT  S +  C  +  L LG+
Sbjct: 232 PGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGR 291

Query: 296 WLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTLFDGMKS--KDVMIWNAVISAYA 352
            +HAY+L++     +  +A+ALVDMY     +  AR +FD +    + + +WNA++  YA
Sbjct: 292 EMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYA 351

Query: 353 QAHCIDKAFELFIHMKV-SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
           QA   ++A ELF  M+  + V P+E T+ G+L  C  +      + +H Y+ K+G+  + 
Sbjct: 352 QAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNP 411

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
            ++ AL+D+YA+ GD+  A  +F+    RD+  WN ++ G  + G   +A     +M++ 
Sbjct: 412 FVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQ 471

Query: 472 G------------------VKPNGITFIGLLNACSHAGLVTEGKSVFD-KMVHGLGLVPK 512
           G                  V PN +T + LL  C+      +GK +    M H L     
Sbjct: 472 GRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALD--SD 529

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           I     +VD+  + G L  +  +   +P R N+I W  L+ A  +H
Sbjct: 530 IAVGSALVDMYAKCGCLALSRAVFDRLPKR-NVITWNVLIMAYGMH 574


>gi|20160775|dbj|BAB89716.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|125573261|gb|EAZ14776.1| hypothetical protein OsJ_04704 [Oryza sativa Japonica Group]
          Length = 916

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 196/586 (33%), Positives = 333/586 (56%), Gaps = 9/586 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++   ++N++ + A+ ++  MR   ++ D  T+ TI+ AC    +   GKE+HG
Sbjct: 333 LVTWNAMIKGLVENDRVNEAMCMFQEMRSK-NQPDVATLVTIISACGDHGLLPEGKEVHG 391

Query: 96  FAIKNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG-GLP 153
           + IK G +  +  V N+L+ +Y +C    +AR LF  MP RD++SW+TMI GY R   L 
Sbjct: 392 YIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLG 451

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           EEA  + + +    +  +   +++++       D++ GK++H+ +++       GV+ A 
Sbjct: 452 EEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILK--YGFLTGVSAAN 509

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQ-NSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NV 271
           +LI MY  CG+   A  L   +   + ++SW   I G ++     + +  F  M     +
Sbjct: 510 SLIHMYICCGDSLAAFSLLESITPISDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTL 569

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P  IT++S++  CG +    LGK +H   L+   EF+L + NAL+ MY +  +  SA  
Sbjct: 570 NPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAEL 629

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +F  +  +++  WN +IS +AQ +   +AF+ +   K+    PNE+++VG++  CT+ G 
Sbjct: 630 IFSSLVGRNLCSWNCMISGFAQNNEGLRAFQFY--KKMEDFEPNEISIVGIICACTQLGD 687

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L  GK +H ++ + GL+ +V +  +LVDMY+KCG ++ + R+F  +  + I  WN+M++ 
Sbjct: 688 LRQGKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISA 747

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           +G HG G +++  F  M  SGVK    TFI LL+ACSH+GL  EG   +  M+   G++P
Sbjct: 748 FGFHGLGLKSIEIFWKMNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIP 807

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
             EH+ C+VD+LGRAG L EAH+ ++S+P +    VWGALL+A        M E  A  +
Sbjct: 808 TPEHHVCVVDMLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMCESVAKHL 867

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
           L +EP+N GY V MSN+YA  + W+    VR ++++  + K  G S
Sbjct: 868 LCLEPENSGYYVTMSNLYAYQDMWSGAVQVRDILQDKGLMKPRGRS 913



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 145/527 (27%), Positives = 264/527 (50%), Gaps = 17/527 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+ +++   N +   A+ ++ +M      +D+ ++  +L   ++      G   HG
Sbjct: 129 LILWNAAISALTLNCRYGDAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHG 188

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+K  LD D  + N L+ MY++CG   S+  +F  MP RD  SW++M+ G    GL E 
Sbjct: 189 MALKRCLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEI 248

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADV-DLGKAIHACVVRNCKDEKLGVAIATA 214
           +    +EM     +  EV++  ++S  + + D+   G+++H+ V++    E    ++A +
Sbjct: 249 SAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIK-LGYEDTTSSVANS 307

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LI  Y + G    A+++F   +  ++V+W  MI G +  + +NE + +F EM  +N  P 
Sbjct: 308 LITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKNQ-PD 366

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEF-SLAMANALVDMYGKCREIRSARTLF 333
             T++++I  CG  G L  GK +H YI++ G  +   ++ N+L+D+Y KC +  +AR LF
Sbjct: 367 VATLVTIISACGDHGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILF 426

Query: 334 DGMKSKDVMIWNAVISAYAQAHCI-DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
             M  +D++ WN +IS Y++   + ++A  +F  +    +     T+V ++  C     L
Sbjct: 427 RTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDL 486

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAG 451
             GK +H++I K G    V    +L+ MY  CGD   A+ L  S     DI  WN  + G
Sbjct: 487 NFGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPISDIISWNTAIVG 546

Query: 452 YGMHGCGEEALIFFVDMERS-GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
              +G   +AL  F  M  +  + P+ IT + +L+ C +  L + GKS     +H + L 
Sbjct: 547 CVQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKS-----IHCMALK 601

Query: 511 PKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
             IE        ++ +  R G  + A E+I S  +  N+  W  +++
Sbjct: 602 RLIEFNLRVKNALLTMYFRFGDTESA-ELIFSSLVGRNLCSWNCMIS 647



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 204/411 (49%), Gaps = 7/411 (1%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H  A+K+G   D  V  ++I  YS    + SA  +FDE    D++ W+  I        
Sbjct: 85  LHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
             +A+ + R M  +       +M+ M+S  +    ++ G A H   ++ C D  L  ++ 
Sbjct: 145 YGDAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDL--SLW 202

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
             L+DMY+KCG+   ++ +F R+      SW  M+SG +           F EM+  +  
Sbjct: 203 NTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQ 262

Query: 273 PSEITILSLIIECGFVGGL-QLGKWLHAYILRNGFEFSL-AMANALVDMYGKCREIRSAR 330
             E+++  ++  C  +  L   G+ +H+ +++ G+E +  ++AN+L+  Y +     +A 
Sbjct: 263 ADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAE 322

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +F    +K+++ WNA+I    +   +++A  +F  M+ SK +P+  T+V ++S C + G
Sbjct: 323 EVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMR-SKNQPDVATLVTIISACGDHG 381

Query: 391 ALEMGKWLHTYIEKQG-LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            L  GK +H YI K+G +  +  +  +L+D+Y KC D + A  LF     RD+  WN M+
Sbjct: 382 LLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMI 441

Query: 450 AGYGMH-GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           +GY  +   GEEA   F  +   G+     T + ++ +C     +  GKSV
Sbjct: 442 SGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSV 492



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 4/258 (1%)

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           LH   L++G      +  +++  Y + R++ SA  +FD   + D+++WNA ISA      
Sbjct: 85  LHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
              A  LF  M       +  +MV +LS  + A +LE G   H    K+ L+ D+ L   
Sbjct: 145 YGDAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSLWNT 204

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           L+DMYAKCGD   +  +F    YRD   WN+M++G   +G  E +  +F +M RS  + +
Sbjct: 205 LMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQAD 264

Query: 477 GITFIGLLNACSH-AGLVTEGKSVFDKMVHGLGLVPKIEHYG-CMVDLLGRAGLLDEAHE 534
            ++   +L+ACSH   L + G+SV   ++  LG           ++      G  + A E
Sbjct: 265 EVSLSCVLSACSHLKDLFSFGESVHSSVIK-LGYEDTTSSVANSLITFYYELGFPEAAEE 323

Query: 535 MIKSMPLRPNMIVWGALL 552
           +  S     N++ W A++
Sbjct: 324 VFLSTS-NKNLVTWNAMI 340


>gi|356571125|ref|XP_003553731.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g05240-like [Glycine max]
          Length = 552

 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 186/513 (36%), Positives = 296/513 (57%), Gaps = 10/513 (1%)

Query: 117 SECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMI 176
           S  G + +A  +F ++    V  W++MIRG+     P  ++ + R++      P      
Sbjct: 38  SXFGDINNADLVFRQIDAPSVYIWNSMIRGFVNNHNPRMSMLLYRQLIENGYSPDHFTFP 97

Query: 177 SMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLN 236
            ++     +AD D GK IH C+V++  +       AT L+ MY  C ++    ++F+ + 
Sbjct: 98  FVLKACCAIADQDCGKCIHCCIVKSGFEAD--AYTATGLLHMYVSCADMKSGLKVFDNIP 155

Query: 237 QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
             +VV+WT +I+GY+  N+  E +++F +M    V P+EIT+++ +I C        G+W
Sbjct: 156 IWNVVAWTCLIAGYVNNNQPYEALKVFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQW 215

Query: 297 LHAYILRNGFE-------FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
           +H +I + G++        ++ +A A+++MY KC   + AR LF+ M  ++++ WN++I+
Sbjct: 216 VHQHIRKAGYDPFMSTSNSNIILATAILEMYAKCGSFKIARDLFNKMPQRNIVSWNSMIN 275

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
           AY Q     +A +LF  M  S + P++ T + +LS+C    AL +G+ +H Y+ K G+  
Sbjct: 276 AYNQYERHKEALDLFFDMWTSGIYPDKATFLSVLSVCAHLCALALGQTVHAYLXKTGIGT 335

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM- 468
           D+ L TAL+DMYAK G +  A ++FS    RD+ MW +M+ G  MHG G EAL  F  M 
Sbjct: 336 DISLATALLDMYAKTGGLGSAQKIFSSLQKRDVVMWTSMINGLAMHGDGNEALGMFQTMH 395

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
           E S + P+ IT+IG+L ACSH GLV E K  F  M     +VP  EHYGCMVDLL R+G 
Sbjct: 396 EDSSLVPDHITYIGVLFACSHVGLVEEAKKHFRLMTEMYSIVPGREHYGCMVDLLSRSGH 455

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNI 588
             EA  ++++M ++PN+ + GALL   ++H+N  +      ++ E+E    G +VL+SNI
Sbjct: 456 FGEAERLMETMAIQPNISIXGALLYGCQIHENLXVANQVKERLTELESCQSGAHVLLSNI 515

Query: 589 YAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
           YA A RW DV G R+VMK  R+ K  G SSVE+
Sbjct: 516 YAKAGRWEDVNGTRKVMKHKRITKIIGHSSVEM 548



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 231/425 (54%), Gaps = 8/425 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++  ++ N+ P  ++ +Y  + +NG   D+FT P +LKAC  +     GK IH   +
Sbjct: 61  WNSMIRGFVNNHNPRMSMLLYRQLIENGYSPDHFTFPFVLKACCAIADQDCGKCIHCCIV 120

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G + DAY +  L+ MY  C  + S   +FD +P  +VV+W+ +I GY     P EAL+
Sbjct: 121 KSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPIWNVVAWTCLIAGYVNNNQPYEALK 180

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA-----IAT 213
           V ++M    + P+E+ M++ +   A   D D G+ +H  + +   D  +  +     +AT
Sbjct: 181 VFKDMSHCGVEPNEITMVNALIXCARSRDFDTGQWVHQHIRKAGYDPFMSTSNSNIILAT 240

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           A+++MY+KCG+   A+ LFN++ Q ++VSW  MI+ Y +     E + LF +M    ++P
Sbjct: 241 AILEMYAKCGSFKIARDLFNKMPQRNIVSWNSMINAYNQYERHKEALDLFFDMWTSGIYP 300

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
            + T LS++  C  +  L LG+ +HAY+ + G    +++A AL+DMY K   + SA+ +F
Sbjct: 301 DKATFLSVLSVCAHLCALALGQTVHAYLXKTGIGTDISLATALLDMYAKTGGLGSAQKIF 360

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGAL 392
             ++ +DV++W ++I+  A     ++A  +F  M + S + P+ +T +G+L  C+  G +
Sbjct: 361 SSLQKRDVVMWTSMINGLAMHGDGNEALGMFQTMHEDSSLVPDHITYIGVLFACSHVGLV 420

Query: 393 EMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMA 450
           E   K      E   +         +VD+ ++ G    A RL  + AI  +I +  A++ 
Sbjct: 421 EEAKKHFRLMTEMYSIVPGREHYGCMVDLLSRSGHFGEAERLMETMAIQPNISIXGALLY 480

Query: 451 GYGMH 455
           G  +H
Sbjct: 481 GCQIH 485



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 2/201 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +NS++ +Y +  +   AL+++  M  +G   D  T  ++L  CA +    LG+ +H 
Sbjct: 267 IVSWNSMINAYNQYERHKEALDLFFDMWTSGIYPDKATFLSVLSVCAHLCALALGQTVHA 326

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +  K G+  D  ++ AL+ MY++ G L SA+ +F  +  RDVV W++MI G    G   E
Sbjct: 327 YLXKTGIGTDISLATALLDMYAKTGGLGSAQKIFSSLQKRDVVMWTSMINGLAMHGDGNE 386

Query: 156 ALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           AL + + M     + P  +  I ++   + V  V+  K  H  ++        G      
Sbjct: 387 ALGMFQTMHEDSSLVPDHITYIGVLFACSHVGLVEEAKK-HFRLMTEMYSIVPGREHYGC 445

Query: 215 LIDMYSKCGNLAYAKQLFNRL 235
           ++D+ S+ G+   A++L   +
Sbjct: 446 MVDLLSRSGHFGEAERLMETM 466


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 178/462 (38%), Positives = 277/462 (59%), Gaps = 3/462 (0%)

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
           + P      +++     +  +  GK +H  V+ +  + K  + I  +L+ MY++CG+L  
Sbjct: 70  LEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNS--NFKHDLVIQNSLLFMYARCGSLEG 127

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A++LF+ +    +VSWT MI+GY + +  ++ + LF  M+ +   P+E T+ SL+  CG+
Sbjct: 128 ARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGY 187

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
           +     G+ +HA   + G   ++ + ++LVDMY +C  +  A  +FD +  K+ + WNA+
Sbjct: 188 MASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNAL 247

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           I+ YA+    ++A  LF+ M+    RP E T   LLS C+  G LE GKWLH ++ K   
Sbjct: 248 IAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQ 307

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
           ++   +   L+ MYAK G +  A ++F + +  D+   N+M+ GY  HG G+EA   F +
Sbjct: 308 KLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDE 367

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           M R G++PN ITF+ +L ACSHA L+ EGK  F  ++    + PK+ HY  +VDLLGRAG
Sbjct: 368 MIRFGIEPNDITFLSVLTACSHARLLDEGKHYFG-LMRKYNIEPKVSHYATIVDLLGRAG 426

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSN 587
           LLD+A   I+ MP+ P + +WGALL ASK+HKN  MG  AA ++ E++P   G + L++N
Sbjct: 427 LLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPSYPGTHTLLAN 486

Query: 588 IYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           IYA A RW DVA VR++MK+  VKKEP  S VEV   VH F+
Sbjct: 487 IYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFV 528



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/390 (32%), Positives = 204/390 (52%), Gaps = 5/390 (1%)

Query: 68  EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY 127
           E D     T+LK C Q+     GK +H   + +    D  + N+L+ MY+ CGSL  AR 
Sbjct: 71  EPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARR 130

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           LFDEMP+RD+VSW++MI GY +     +AL +   M      P+E  + S+V     +A 
Sbjct: 131 LFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMAS 190

Query: 188 VDLGKAIHACVVR-NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
            + G+ IHAC  +  C      V + ++L+DMY++CG L  A  +F++L   + VSW  +
Sbjct: 191 YNCGRQIHACCWKYGCHS---NVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNAL 247

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           I+GY R  E  E + LF  M  E   P+E T  +L+  C  +G L+ GKWLHA+++++  
Sbjct: 248 IAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQ 307

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
           +    + N L+ MY K   IR A  +FD +   DV+  N+++  YAQ     +A + F  
Sbjct: 308 KLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDE 367

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           M    + PN++T + +L+ C+ A  L+ GK     + K  +E  V     +VD+  + G 
Sbjct: 368 MIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGL 427

Query: 427 VNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
           ++ A     E  I   + +W A++    MH
Sbjct: 428 LDQAKSFIEEMPIEPTVAIWGALLGASKMH 457



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 172/316 (54%), Gaps = 3/316 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + S++T Y +N++ S AL ++  M  +G+E + FT+ +++K C  +   + G++IH 
Sbjct: 140 MVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHA 199

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              K G   + +V ++L+ MY+ CG L  A  +FD++  ++ VSW+ +I GY R G  EE
Sbjct: 200 CCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIAGYARKGEGEE 259

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL +   M+    RP+E    +++S  + +  ++ GK +HA ++++   +KL   +   L
Sbjct: 260 ALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKS--SQKLVGYVGNTL 317

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           + MY+K G++  A+++F++L +  VVS   M+ GY +     E  + F EMI   + P++
Sbjct: 318 LHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPND 377

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           IT LS++  C     L  GK     + +   E  ++    +VD+ G+   +  A++  + 
Sbjct: 378 ITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEE 437

Query: 336 MK-SKDVMIWNAVISA 350
           M     V IW A++ A
Sbjct: 438 MPIEPTVAIWGALLGA 453


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 174/440 (39%), Positives = 274/440 (62%), Gaps = 4/440 (0%)

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           G+ +HA +++ C +    V + T LI +Y+KC  L  A+++ + + + +VVSWT MISGY
Sbjct: 496 GQRVHAHMIKTCYEPP--VYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTAMISGY 553

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
            +    +E + LF EM+     P+E T  +++  C    G QLG+ +H+ +++  FE  +
Sbjct: 554 SQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHI 613

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
            + ++L+DMY K  +I  AR +FDG+  +DV+   A+IS YAQ    ++A +LF  ++  
Sbjct: 614 FVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQRE 673

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
            +R N VT   +L+  +   AL+ G+ +H+++ +  L   V+L+ +L+DMY+KCG +  +
Sbjct: 674 GMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYS 733

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM-ERSGVKPNGITFIGLLNACSH 489
            R+F     R +  WNAM+ GY  HG G EA+  F  M E + VKP+ +TF+ +L+ CSH
Sbjct: 734 RRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSH 793

Query: 490 AGLVTEGKSVFDKMVHGL-GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
            G+   G  +F +MV+   G  P+IEHYGC+VDL GRAG ++EA E IK MP  P   +W
Sbjct: 794 GGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIW 853

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
           G+LL A ++H+N  +GE  A ++LEIE +N G  V++SN+YA A RW+DV  VR +MKE 
Sbjct: 854 GSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEK 913

Query: 609 RVKKEPGFSSVEVNGLVHKF 628
            V KEPG S +E++  +H F
Sbjct: 914 AVIKEPGRSWIELDQTLHTF 933



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 223/439 (50%), Gaps = 17/439 (3%)

Query: 30  TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRK-------NGSEVDNFTIPTILKACA 82
           ++I NP +R   L++++  N+     L     +++        G EV+     ++L  C 
Sbjct: 429 SSISNPFSRQRILLSTFPANSPDLKTLCSNRQLKEALLEMGIQGLEVEFQGYDSVLTECI 488

Query: 83  QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
                  G+ +H   IK   +   Y+   LI +Y++C  L  AR + DEMP R+VVSW+ 
Sbjct: 489 SQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERNVVSWTA 548

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           MI GY + G   EAL +  EM      P+E    ++++     +   LG+ IH+ V++  
Sbjct: 549 MISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTS 608

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
            +    + + ++L+DMY+K G +  A+++F+ L +  VVS T +ISGY +     E + L
Sbjct: 609 FESH--IFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEEALDL 666

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F  +  E +  + +T  S++     +  L  G+ +H+++LR    F + + N+L+DMY K
Sbjct: 667 FRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSK 726

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK-VSKVRPNEVTMVG 381
           C  +  +R +FD M  + V+ WNA++  Y++     +A ELF  MK  +KV+P+ VT + 
Sbjct: 727 CGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLA 786

Query: 382 LLSLCTEAGALEMGKWLHTYIE----KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
           +LS C+  G  + G  L  + E    K G E ++     +VD++ + G V  A+    + 
Sbjct: 787 VLSGCSHGGMEDRG--LEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIKKM 844

Query: 438 IYRDI-CMWNAMMAGYGMH 455
            +     +W +++    +H
Sbjct: 845 PFEPTAAIWGSLLGACRVH 863



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 148/283 (52%), Gaps = 10/283 (3%)

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           S++ EC     ++ G+ +HA++++  +E  + +   L+ +Y KCR +  AR + D M  +
Sbjct: 482 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPER 541

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           +V+ W A+IS Y+Q     +A  LF+ M +S   PNE T   +L+ CT +   ++G+ +H
Sbjct: 542 NVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIH 601

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
           + + K   E  + + ++L+DMYAK G +  A R+F     RD+    A+++GY   G  E
Sbjct: 602 SLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDE 661

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY--- 516
           EAL  F  ++R G++ N +T+  +L A S    +  G     + VH   L  K+  Y   
Sbjct: 662 EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHG-----RQVHSHVLRAKLPFYVVL 716

Query: 517 -GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
              ++D+  + G L  +  +  SMP R  +I W A+L     H
Sbjct: 717 QNSLIDMYSKCGSLTYSRRIFDSMPER-TVISWNAMLVGYSKH 758


>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
 gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
          Length = 711

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 193/597 (32%), Positives = 321/597 (53%), Gaps = 13/597 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++T Y+++    +A      M++ G + D +T  +ILK  A      LG+++H   +
Sbjct: 70  WNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIV 129

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G +   Y  +AL+ MY++C  +  A  +F  MP R+ VSW+ +I G+ + G  + A  
Sbjct: 130 KIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFW 189

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV----AIATA 214
           ++  M+   +R  +     +++L      +D  K     +  +CK  K G+    A+  A
Sbjct: 190 LLDCMQKEGVRVEDGTFAPLLTL------LDGDKFYKLTMQLHCKIIKHGLEFYNALCNA 243

Query: 215 LIDMYSKCGNLAYAKQLFN-RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
            +  YS+CG L  AK++F+  +    +V+W  M+  Y+  ++  +   LF EM      P
Sbjct: 244 TLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEP 303

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC--REIRSART 331
              T   +I  C        GK  HA +++ G E S+ + NAL+ MY K   + + +A  
Sbjct: 304 DIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNKSMEAALN 363

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           LF  MKSKD + WN++++ ++Q    + A +LF HM+ S    ++     +L  C++   
Sbjct: 364 LFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAI 423

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L++G+ +H    K G + +  + ++L+ MY+KCG +  A++ F +        WN++M  
Sbjct: 424 LQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFA 483

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           Y  HG G+ AL  F  M    VK + +TF+ +L ACSH GLV +G+ V   M    G+ P
Sbjct: 484 YAQHGQGDVALDLFSIMREREVKLDHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPP 543

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
           ++EHY C VDL GRAG L+EA  +I SMP +PN +V   LL A +   N  +    A+Q+
Sbjct: 544 RMEHYACAVDLFGRAGYLEEAKALIDSMPFQPNAMVLKTLLGACRACGNIELAAQVASQL 603

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           LE+EP+ +   V++SN+Y    RW+D A V R+M+E +VKK PG+S +EV   VH F
Sbjct: 604 LEVEPEEHCTYVILSNMYGHLKRWDDKASVTRLMRERKVKKVPGWSWIEVKNEVHAF 660



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 235/493 (47%), Gaps = 15/493 (3%)

Query: 71  NFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSEC--GSLVSARYL 128
           N  + +   A   V +TH        A K+G+    YV+N ++  YS+C  G L  A  L
Sbjct: 5   NSVVESSRHALYNVFLTHCQ------AFKSGIISHIYVANNILFRYSKCFSGDLNLACKL 58

Query: 129 FDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV 188
           FDEMP++D V+W+TMI GY   G    A E ++ M+    +       S++   A     
Sbjct: 59  FDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRH 118

Query: 189 DLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
           DLG+ +H+ +V+   ++   V   +AL+DMY+KC  +  A  +F  +   + VSW  +I 
Sbjct: 119 DLGQQVHSLIVKIGYEQ--SVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALID 176

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
           G+++  + +    L   M +E V   + T   L+         +L   LH  I+++G EF
Sbjct: 177 GFVQVGDRDTAFWLLDCMQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEF 236

Query: 309 SLAMANALVDMYGKCREIRSARTLFDG-MKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             A+ NA +  Y +C  +  A+ +FDG + ++D++ WN+++ AY      + AF LF+ M
Sbjct: 237 YNALCNATLTAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEM 296

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD- 426
           +     P+  T   ++S C  A     GK  H  + K+GLE  V +  AL+ MY K  + 
Sbjct: 297 QGFGFEPDIYTYTCVISACFAAAHKNYGKSFHALVIKRGLEESVTICNALITMYLKLNNK 356

Query: 427 -VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
            +  A  LF     +D   WN+++ G+   G  E+AL  F  M  S  + +   +  +L 
Sbjct: 357 SMEAALNLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLR 416

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
           +CS   ++  G+ +    V   G          ++ +  + G++++A +  +    + + 
Sbjct: 417 SCSDLAILQLGQQIHLLTVK-TGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTT-KESS 474

Query: 546 IVWGALLAASKLH 558
           I W +++ A   H
Sbjct: 475 ITWNSIMFAYAQH 487



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 175/353 (49%), Gaps = 8/353 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NS++ +Y+ ++K   A N++  M+  G E D +T   ++ AC      + GK  H 
Sbjct: 270 LVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAAAHKNYGKSFHA 329

Query: 96  FAIKNGLDGDAYVSNALIQMYSECG--SLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
             IK GL+    + NALI MY +    S+ +A  LF  M ++D VSW++++ G+ + G  
Sbjct: 330 LVIKRGLEESVTICNALITMYLKLNNKSMEAALNLFHSMKSKDRVSWNSILTGFSQMGFS 389

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           E+AL++   MR       + A  +++   +D+A + LG+ IH   V+   D      +A+
Sbjct: 390 EDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLAILQLGQQIHLLTVKTGFDS--NDFVAS 447

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           +LI MYSKCG +  A + F    + S ++W  ++  Y +  + +  + LF+ M E  V  
Sbjct: 448 SLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMFAYAQHGQGDVALDLFSIMREREVKL 507

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTL 332
             +T ++++  C  VG ++ G+ +   +  + G    +      VD++G+   +  A+ L
Sbjct: 508 DHVTFVAVLTACSHVGLVEQGRCVLKSMESDYGIPPRMEHYACAVDLFGRAGYLEEAKAL 567

Query: 333 FDGMK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            D M    + M+   ++ A      I+ A +  +  ++ +V P E     +LS
Sbjct: 568 IDSMPFQPNAMVLKTLLGACRACGNIELAAQ--VASQLLEVEPEEHCTYVILS 618



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 136/307 (44%), Gaps = 17/307 (5%)

Query: 298 HAYILRNGFEFSLAMANALVDMYGKC--REIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
           H    ++G    + +AN ++  Y KC   ++  A  LFD M  KD + WN +I+ Y ++ 
Sbjct: 22  HCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESG 81

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
            +  A+E    MK    + +  T   +L     A   ++G+ +H+ I K G E  V   +
Sbjct: 82  NLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHACRHDLGQQVHSLIVKIGYEQSVYAGS 141

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           AL+DMYAKC  V  AY +F     R+   WNA++ G+   G  + A      M++ GV+ 
Sbjct: 142 ALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALIDGFVQVGDRDTAFWLLDCMQKEGVRV 201

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLG--RAGLLDEA 532
              TF  LL              +  K++ HGL     +    C   L      GLL++A
Sbjct: 202 EDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNAL----CNATLTAYSECGLLEDA 257

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI-----EPQNYGYNVLMSN 587
             +        +++ W ++L A  +H      E A    LE+     EP  Y Y  ++S 
Sbjct: 258 KRVFDGAVGTRDLVTWNSMLVAYLVHDKD---EDAFNLFLEMQGFGFEPDIYTYTCVISA 314

Query: 588 IYAVANR 594
            +A A++
Sbjct: 315 CFAAAHK 321


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 192/555 (34%), Positives = 318/555 (57%), Gaps = 4/555 (0%)

Query: 84  VLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTM 143
           +L+ HL  +++   I +GL    ++    I      G +  A   F E+   D++ W+ +
Sbjct: 13  MLLKHL-DQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAI 71

Query: 144 IRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
           I+GY +  + +  + +  +M+   + P+    + ++      +   +GK IH    +   
Sbjct: 72  IKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGF 131

Query: 204 DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
                V +  +L+ MY+K G ++YA+ +F++L+  +VVSWT +ISGY++  +  E + +F
Sbjct: 132 GSN--VFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVF 189

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
            EM + NV P  I ++S++     V  L  GK +H  + + G EF   +  +L  MY K 
Sbjct: 190 KEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKR 249

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
             +  AR  F+ M+  ++++WNA+IS YA     ++A +LF  M    +R + +TM   +
Sbjct: 250 GLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAV 309

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
               + G+LE+ +WL  YI K     D  + T L+DMYAKCG +  A  +F     +D+ 
Sbjct: 310 LASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVV 369

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
           +W+ M+ GYG+HG G+EA+  + +M+++GV PN  TFIGLL AC ++GLV EG  +F  M
Sbjct: 370 LWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLM 429

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
               G+ P  +HY C+VDLLGRAG L++A++ I SMP++P + VWGALL+A K+H+   +
Sbjct: 430 PDH-GIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRL 488

Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
           GEIAA Q+  ++P N G+ V +SN+YA A+ W  VA VR +M +  + K+ G SS+E+NG
Sbjct: 489 GEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGLNKDLGHSSIEING 548

Query: 624 LVHKFIRGGMVNWKS 638
            +  F  G   + KS
Sbjct: 549 NLETFQVGDRSHPKS 563



 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 137/422 (32%), Positives = 234/422 (55%), Gaps = 11/422 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y + N   + + +Y  M+ +    + FT   +LKAC    +  +GK+IHG   
Sbjct: 68  WNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTF 127

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   + +V N+L+ MY++ G +  AR +FD++ +R VVSW+++I GY + G P EAL 
Sbjct: 128 KYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALN 187

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATA 214
           V +EMR  +++P  +A++S+++ + +V D+  GK+IH  V       KLG+     I  +
Sbjct: 188 VFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVT------KLGLEFEPDIVIS 241

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L  MY+K G +  A+  FNR+ + +++ W  MISGY       E ++LF EMI +N+   
Sbjct: 242 LTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVD 301

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            IT+ S ++    VG L+L +WL  YI ++ +     +   L+DMY KC  I  AR +FD
Sbjct: 302 SITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFD 361

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            +  KDV++W+ +I  Y       +A  L+  MK + V PN+ T +GLL+ C  +G ++ 
Sbjct: 362 RVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKE 421

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR-LFSEAIYRDICMWNAMMAGYG 453
           G  L   +   G+E      + +VD+  + G +N AY  + S  I   + +W A+++   
Sbjct: 422 GWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACK 481

Query: 454 MH 455
           +H
Sbjct: 482 IH 483



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 85/156 (54%), Gaps = 1/156 (0%)

Query: 26  KFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV 84
           +F +  +  P L  +N++++ Y  N     A+ ++  M      VD+ T+ + + A AQV
Sbjct: 256 RFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQV 315

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
               L + + G+  K+    D +V+  LI MY++CGS+  AR +FD + ++DVV WS MI
Sbjct: 316 GSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMI 375

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
            GY   G  +EA+ +  EM+   + P++   I +++
Sbjct: 376 MGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLT 411


>gi|15230248|ref|NP_189142.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273633|sp|Q9LJR6.1|PP253_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial; Flags: Precursor
 gi|9293988|dbj|BAB01891.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643452|gb|AEE76973.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 601

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 186/544 (34%), Positives = 314/544 (57%), Gaps = 14/544 (2%)

Query: 92  EIHGFAIKNG--LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           +IH F I  G  L+G + +S  LI      G +  AR +FDE+P R V  +++MI  Y R
Sbjct: 35  QIHAFVISTGNLLNGSS-ISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSR 93

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG- 208
           G  P+E L +  +M    I+P        +        ++ G+A+       CK    G 
Sbjct: 94  GKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVW------CKAVDFGY 147

Query: 209 ---VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
              V + ++++++Y KCG +  A+ LF ++ +  V+ WT M++G+ +  +  + V  + E
Sbjct: 148 KNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYRE 207

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M  E      + +L L+   G +G  ++G+ +H Y+ R G   ++ +  +LVDMY K   
Sbjct: 208 MQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGF 267

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           I  A  +F  M  K  + W ++IS +AQ    +KAFE  + M+    +P+ VT+VG+L  
Sbjct: 268 IEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVA 327

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
           C++ G+L+ G+ +H YI K+ + +D +  TAL+DMY+KCG ++ +  +F     +D+  W
Sbjct: 328 CSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCW 386

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           N M++ YG+HG G+E +  F+ M  S ++P+  TF  LL+A SH+GLV +G+  F  M++
Sbjct: 387 NTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMIN 446

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
              + P  +HY C++DLL RAG ++EA +MI S  L   + +W ALL+    H+N S+G+
Sbjct: 447 KYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGD 506

Query: 566 IAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLV 625
           IAA +IL++ P + G   L+SN +A AN+W +VA VR++M+   ++K PG+S++EVNG +
Sbjct: 507 IAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGEL 566

Query: 626 HKFI 629
             F+
Sbjct: 567 RTFL 570



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 212/415 (51%), Gaps = 5/415 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YNS++  Y +   P   L +Y  M     + D+ T    +KAC   L+   G+ +   A+
Sbjct: 84  YNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAV 143

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G   D +V ++++ +Y +CG +  A  LF +M  RDV+ W+TM+ G+ + G   +A+E
Sbjct: 144 DFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVE 203

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             REM+        V M+ ++    D+ D  +G+++H  + R      + V + T+L+DM
Sbjct: 204 FYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRT--GLPMNVVVETSLVDM 261

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G +  A ++F+R+   + VSW  +ISG+ +    N+      EM      P  +T+
Sbjct: 262 YAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTL 321

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           + +++ C  VG L+ G+ +H YIL+         A AL+DMY KC  + S+R +F+ +  
Sbjct: 322 VGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGR 380

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-W 397
           KD++ WN +IS Y       +   LF+ M  S + P+  T   LLS  + +G +E G+ W
Sbjct: 381 KDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHW 440

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAG 451
               I K  ++        L+D+ A+ G V  A  +  SE +   + +W A+++G
Sbjct: 441 FSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSG 495


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  353 bits (905), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 193/600 (32%), Positives = 315/600 (52%), Gaps = 19/600 (3%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           +V ++ +N     AL  Y  M   G   D       +  C+       G+ +H   ++  
Sbjct: 29  IVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQ 88

Query: 102 L-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           L + D  +  ALI MY+ C  L  AR  FDEM  + +V+W+ +I GY R G    AL++ 
Sbjct: 89  LLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIY 148

Query: 161 REMRFMD---IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IAT 213
           ++M       ++P  +   S +   + V D+  G+ I A  V +      G A    +  
Sbjct: 149 QDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVAS------GYASDSIVQN 202

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALI+MYSKCG+L  A+++F+RL    V++W  MISGY +     + + LF  M   +  P
Sbjct: 203 ALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKP 262

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE-IRSARTL 332
           + +T + L+  C  +  L+ G+ +H  +  +G+E  L + N L++MY KC   +  AR +
Sbjct: 263 NVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQV 322

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ ++++DV+ WN +I AY Q      A ++F  M++  V PNE+T+  +LS C   GA 
Sbjct: 323 FERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAK 382

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
             GK +H  I     + DV+L+ +L++MY +CG ++    +F+    + +  W+ ++A Y
Sbjct: 383 RQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAY 442

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             HG     L  F ++ + G+  + +T +  L+ACSH G++ EG   F  MV   GL P 
Sbjct: 443 AQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPD 502

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
             H+ CMVDLL RAG L+ A  +I  MP  P+ + W +LL+  KLH +       A ++ 
Sbjct: 503 YRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLF 562

Query: 573 EIEPQNYGYNV-LMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           E+E ++    V L+SN+YA A RW+D   VR+       +K PG S +E+N  VH+F+ G
Sbjct: 563 ELESEDEHSTVTLLSNVYAEAGRWDD---VRKTRNRRAARKNPGCSYIEINDTVHEFVAG 619



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 135/454 (29%), Positives = 240/454 (52%), Gaps = 7/454 (1%)

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           MY +CGS+  A  +F  + + + VSW+ ++  + R G   EAL   R M    +RP    
Sbjct: 1   MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
            +  + + +   D+  G+ +HA ++     E   + + TALI MY++C +L  A++ F+ 
Sbjct: 61  FVVAIGVCSSSKDLKQGQLLHAMILETQLLE-FDIILGTALITMYARCRDLELARKTFDE 119

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE---ENVFPSEITILSLIIECGFVGGL 291
           + + ++V+W  +I+GY R  +    ++++ +M+    E + P  IT  S +  C  VG +
Sbjct: 120 MGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDI 179

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
             G+ + A  + +G+     + NAL++MY KC  + SAR +FD +K++DV+ WN +IS Y
Sbjct: 180 SQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGY 239

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
           A+     +A ELF  M  +  +PN VT +GLL+ CT    LE G+ +H  +++ G E D+
Sbjct: 240 AKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDL 299

Query: 412 ILKTALVDMYAKC-GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
           ++   L++MY KC   +  A ++F     RD+  WN ++  Y  +G  ++AL  F  M+ 
Sbjct: 300 VIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQL 359

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
             V PN IT   +L+AC+  G   +GK+V   +  G      +     M ++  R G LD
Sbjct: 360 ENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLM-NMYNRCGSLD 418

Query: 531 EAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
           +   +  ++  + +++ W  L+AA   H +   G
Sbjct: 419 DTVGVFAAIRDK-SLVSWSTLIAAYAQHGHSRTG 451



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/426 (31%), Positives = 229/426 (53%), Gaps = 8/426 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFM---RKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           L  +N+L+  Y +N     AL IY  M      G + D  T  + L AC+ V     G+E
Sbjct: 125 LVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGRE 184

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           I    + +G   D+ V NALI MYS+CGSL SAR +FD + NRDV++W+TMI GY + G 
Sbjct: 185 IEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGA 244

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
             +ALE+ + M   D +P+ V  I +++   ++ D++ G+AIH  V  +  +  L   I 
Sbjct: 245 ATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDL--VIG 302

Query: 213 TALIDMYSKC-GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
             L++MY+KC  +L  A+Q+F RL    V++W ++I  Y++  +  + + +F +M  ENV
Sbjct: 303 NVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENV 362

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P+EIT+ +++  C  +G  + GK +HA I     +  + + N+L++MY +C  +     
Sbjct: 363 APNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVG 422

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +F  ++ K ++ W+ +I+AYAQ        E F  +    +  ++VTMV  LS C+  G 
Sbjct: 423 VFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGM 482

Query: 392 LEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY-RDICMWNAMM 449
           L+ G +   + +   GL  D      +VD+ ++ G +  A  L  +  +  D   W +++
Sbjct: 483 LKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLL 542

Query: 450 AGYGMH 455
           +G  +H
Sbjct: 543 SGCKLH 548



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 171/336 (50%), Gaps = 14/336 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++++ Y K    + AL ++  M  N  + +  T   +L AC  +     G+ IH    
Sbjct: 232 WNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVK 291

Query: 99  KNGLDGDAYVSNALIQMYSEC-GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           ++G + D  + N L+ MY++C  SL  AR +F+ +  RDV++W+ +I  Y + G  ++AL
Sbjct: 292 EHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDAL 351

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALI 216
           ++ ++M+  ++ P+E+ + +++S  A +     GKA+HA +    CK +   V +  +L+
Sbjct: 352 DIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKAD---VVLENSLM 408

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           +MY++CG+L     +F  +   S+VSW+ +I+ Y +      G+  F E+++E +   ++
Sbjct: 409 NMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDV 468

Query: 277 TILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           T++S +  C   G L+ G +   + +  +G          +VD+  +   + +A  L   
Sbjct: 469 TMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHD 528

Query: 336 MKS-KDVMIWNAVIS-------AYAQAHCIDKAFEL 363
           M    D + W +++S           A   DK FEL
Sbjct: 529 MPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFEL 564



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 119/271 (43%), Gaps = 15/271 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+ +Y++  +   AL+I+  M+      +  T+  +L ACA +     GK +H    
Sbjct: 334 WNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIA 393

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
                 D  + N+L+ MY+ CGSL     +F  + ++ +VSWST+I  Y + G     LE
Sbjct: 394 SGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLE 453

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL--I 216
              E+    +   +V M+S +S  +    +  G      +V    D  L       L  +
Sbjct: 454 HFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMV---GDHGLAPDYRHFLCMV 510

Query: 217 DMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEM--IEENVFP 273
           D+ S+ G L  A+ L + +      V+WT ++SG    N+     R+  ++  +E     
Sbjct: 511 DLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEH 570

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRN 304
           S +T+LS +         + G+W      RN
Sbjct: 571 STVTLLSNVYA-------EAGRWDDVRKTRN 594


>gi|222619002|gb|EEE55134.1| hypothetical protein OsJ_02921 [Oryza sativa Japonica Group]
          Length = 493

 Score =  352 bits (904), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 181/460 (39%), Positives = 280/460 (60%), Gaps = 13/460 (2%)

Query: 179 VSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNR 234
           +S  A V  +D+G   HA  +      KL +A    +  ALI+MYS C   A A+ + + 
Sbjct: 12  ISAAARVPSLDVGSQFHALSL------KLSLASDSFVLNALINMYSSCNYPASARLVLDS 65

Query: 235 LNQ--NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
             +  + VVSW  +I+GYIR    N+ ++ F +M +E V   E+T+L++++ C   G ++
Sbjct: 66  APRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMK 125

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
           +G   HA ++ NGFE +  + ++LV MY KC  +  AR +F+ M  ++V+ W ++I+   
Sbjct: 126 VGSLCHALVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCT 185

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
           Q+    +A +LF  M+++ V+ ++ T+  ++S C + GAL++G++LH Y +  GL  ++ 
Sbjct: 186 QSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGLGKELS 245

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME-RS 471
           +K +L+DMY+KCGDVN AY++F     RD+  W  M+ G+ M+G   EAL  F  ME   
Sbjct: 246 VKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGED 305

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
            V PN + F+G+L ACSH GLV +G   F +M     LVP+IEHYGCMVDLLGRA LL E
Sbjct: 306 KVMPNEVIFLGVLTACSHGGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAE 365

Query: 532 AHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAV 591
           A + IK MP+ P+++VW +LL A +      + E AA +I ++EP+  G +VL+SN+YA 
Sbjct: 366 AEQFIKDMPVAPDVVVWRSLLFACRASGQVGLAEYAAERIEQLEPKRCGGHVLLSNVYAT 425

Query: 592 ANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             RW DV  VR  M   R  K+PG S +EV+G +H+F  G
Sbjct: 426 TLRWVDVNNVRTGMGNSRTSKKPGCSFIEVDGCIHEFFAG 465



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 127/392 (32%), Positives = 215/392 (54%), Gaps = 19/392 (4%)

Query: 69  VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYL 128
           +DN+++   + A A+V    +G + H  ++K  L  D++V NALI MYS C    SAR +
Sbjct: 3   LDNYSLNIAISAAARVPSLDVGSQFHALSLKLSLASDSFVLNALINMYSSCNYPASARLV 62

Query: 129 FDEMPN--RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            D  P    DVVSW+T+I GY RGG+P +AL+   +M    +R  EV +++++   A   
Sbjct: 63  LDSAPRWASDVVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTG 122

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
            + +G   HA VV N    ++   I ++L+ MY+KCG +  A+++FNR+ + +VV WT M
Sbjct: 123 AMKVGSLCHALVVLN--GFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSM 180

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           I+G  +     E V LF +M    V   + TI +++  CG +G L LG++LHAY   +G 
Sbjct: 181 IAGCTQSGRFKEAVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHAYCDGHGL 240

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
              L++ N+L+DMY KC ++  A  +F G+  +DV  W  +I  +A      +A +LF  
Sbjct: 241 GKELSVKNSLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQ 300

Query: 367 MK-VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
           M+   KV PNEV  +G+L+ C+  G +E G   + +  +     +++ +   ++ Y    
Sbjct: 301 MEGEDKVMPNEVIFLGVLTACSHGGLVEQG---YHHFHRMSKVYNLVPR---IEHYGCMV 354

Query: 426 DVNGAYRLFSEA--------IYRDICMWNAMM 449
           D+ G  +L +EA        +  D+ +W +++
Sbjct: 355 DLLGRAKLLAEAEQFIKDMPVAPDVVVWRSLL 386



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 174/321 (54%), Gaps = 11/321 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N+++  YI+   P+ AL  +  M K    +D  T+  +L ACA+     +G   H 
Sbjct: 73  VVSWNTIIAGYIRGGMPNKALQSFHQMAKEQVRLDEVTLLNVLVACARTGAMKVGSLCHA 132

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             + NG + + Y+ ++L+ MY++CG +  AR +F+ MP R+VV W++MI G  + G  +E
Sbjct: 133 LVVLNGFEINCYIGSSLVSMYAKCGMVEEARRVFNRMPERNVVCWTSMIAGCTQSGRFKE 192

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--VAIAT 213
           A+++ R+M+   ++  +  + ++VS    +  +DLG+ +HA     C    LG  +++  
Sbjct: 193 AVDLFRDMQIAGVKADDATIATVVSSCGQMGALDLGRYLHA----YCDGHGLGKELSVKN 248

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI-EENVF 272
           +LIDMYSKCG++  A Q+F+ L +  V +WTVMI G+       E + LFA+M  E+ V 
Sbjct: 249 SLIDMYSKCGDVNKAYQIFHGLTKRDVFTWTVMIMGFAMNGLCVEALDLFAQMEGEDKVM 308

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF--SLAMANALVDMYGKCREIRSAR 330
           P+E+  L ++  C   GGL    + H + +   +     +     +VD+ G+ + +  A 
Sbjct: 309 PNEVIFLGVLTACSH-GGLVEQGYHHFHRMSKVYNLVPRIEHYGCMVDLLGRAKLLAEAE 367

Query: 331 TLFDGMK-SKDVMIWNAVISA 350
                M  + DV++W +++ A
Sbjct: 368 QFIKDMPVAPDVVVWRSLLFA 388


>gi|293333548|ref|NP_001170485.1| uncharacterized protein LOC100384484 [Zea mays]
 gi|238005588|gb|ACR33829.1| unknown [Zea mays]
 gi|413920755|gb|AFW60687.1| hypothetical protein ZEAMMB73_143396 [Zea mays]
          Length = 569

 Score =  352 bits (904), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 199/535 (37%), Positives = 297/535 (55%), Gaps = 15/535 (2%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IH  AI  G+  +   + +L+   +   SL  AR +FD  P RD   W+T++R +    L
Sbjct: 40  IHARAIVLGVSANPAFATSLLAGVAP-ASLAYARRVFDATPVRDAYMWNTLLRAHSHSQL 98

Query: 153 PEEA--LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
              A  L + + MR   + P       ++   A   ++ LG+A+H  VVR        +A
Sbjct: 99  SHAADTLALYKRMRAAGVAPDHYTYPIVLPACAAARELWLGRAVHGDVVR------FALA 152

Query: 211 ----IATALIDMYSKCGNLAYAKQLFNRLNQNS--VVSWTVMISGYIRCNEINEGVRLFA 264
               + +ALI MY + G +A A+ +F   + +S  VVSWT M++GY++     E V LF 
Sbjct: 153 GDGFVHSALITMYFQEGEVADAELVFAESHGSSRTVVSWTSMVAGYVQNYYFGEAVALFG 212

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
            MI E V P+EIT++S +        L  G+ +H +++R GF+ ++ +ANAL+ MYGKC 
Sbjct: 213 TMIAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVIRLGFDANIPLANALIAMYGKCG 272

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            I  A+TLF+GM ++ +  WN +++ Y Q   + +A + F  M   KV  + VT+V +LS
Sbjct: 273 SIPMAQTLFEGMPARSLASWNTMVAMYEQHADVVEAIKFFRRMLTEKVGFDCVTLVSVLS 332

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
            C  +GAL+ GKW+H      GL+ D  +   LVDMYAKCG++  A  +F     R +  
Sbjct: 333 ACARSGALQTGKWVHELARNHGLDTDARIGNVLVDMYAKCGEIASARNVFDCLRMRSVVS 392

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           W+AM++ Y  HG  EEAL  F  M+  GV+PN  TF  +L AC H+GLV EG   F+ ++
Sbjct: 393 WSAMISAYANHGASEEALKLFSLMKNEGVRPNSFTFTAVLVACGHSGLVEEGLKHFNSIL 452

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
               + P +EHY CMVD+LGRAG L EA+E+I+ M L P+  VWGA LA  KLH N  + 
Sbjct: 453 SDYQMSPTLEHYACMVDMLGRAGRLIEAYEIIRGMSLCPDKCVWGAFLAGCKLHGNLELA 512

Query: 565 EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           E  A  + +    +  + VLMSN+Y  A    D   +R  MKE+ + K  G S++
Sbjct: 513 EFVARDLFQSGSNDVTFYVLMSNMYFEAGMLKDAERMRWAMKEMELNKTAGRSAI 567



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 151/466 (32%), Positives = 246/466 (52%), Gaps = 11/466 (2%)

Query: 39  YNSLVT--SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGF 96
           +N+L+   S+ + +  +  L +Y  MR  G   D++T P +L ACA      LG+ +HG 
Sbjct: 86  WNTLLRAHSHSQLSHAADTLALYKRMRAAGVAPDHYTYPIVLPACAAARELWLGRAVHGD 145

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM--PNRDVVSWSTMIRGYHRGGLPE 154
            ++  L GD +V +ALI MY + G +  A  +F E    +R VVSW++M+ GY +     
Sbjct: 146 VVRFALAGDGFVHSALITMYFQEGEVADAELVFAESHGSSRTVVSWTSMVAGYVQNYYFG 205

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           EA+ +   M    + P+E+ +IS +        +D G+ +H  V+R   D    + +A A
Sbjct: 206 EAVALFGTMIAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVIRLGFDAN--IPLANA 263

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LI MY KCG++  A+ LF  +   S+ SW  M++ Y +  ++ E ++ F  M+ E V   
Sbjct: 264 LIAMYGKCGSIPMAQTLFEGMPARSLASWNTMVAMYEQHADVVEAIKFFRRMLTEKVGFD 323

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            +T++S++  C   G LQ GKW+H     +G +    + N LVDMY KC EI SAR +FD
Sbjct: 324 CVTLVSVLSACARSGALQTGKWVHELARNHGLDTDARIGNVLVDMYAKCGEIASARNVFD 383

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            ++ + V+ W+A+ISAYA     ++A +LF  MK   VRPN  T   +L  C  +G +E 
Sbjct: 384 CLRMRSVVSWSAMISAYANHGASEEALKLFSLMKNEGVRPNSFTFTAVLVACGHSGLVEE 443

Query: 395 G-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGY 452
           G K  ++ +    +   +     +VDM  + G +  AY +    ++  D C+W A +AG 
Sbjct: 444 GLKHFNSILSDYQMSPTLEHYACMVDMLGRAGRLIEAYEIIRGMSLCPDKCVWGAFLAGC 503

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLL-NACSHAGLVTEGK 497
            +HG  E A     D+ +SG   N +TF  L+ N    AG++ + +
Sbjct: 504 KLHGNLELAEFVARDLFQSG--SNDVTFYVLMSNMYFEAGMLKDAE 547



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 77/144 (53%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N++V  Y ++     A+  +  M       D  T+ ++L ACA+      GK +H 
Sbjct: 289 LASWNTMVAMYEQHADVVEAIKFFRRMLTEKVGFDCVTLVSVLSACARSGALQTGKWVHE 348

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A  +GLD DA + N L+ MY++CG + SAR +FD +  R VVSWS MI  Y   G  EE
Sbjct: 349 LARNHGLDTDARIGNVLVDMYAKCGEIASARNVFDCLRMRSVVSWSAMISAYANHGASEE 408

Query: 156 ALEVMREMRFMDIRPSEVAMISMV 179
           AL++   M+   +RP+     +++
Sbjct: 409 ALKLFSLMKNEGVRPNSFTFTAVL 432


>gi|334185093|ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis thaliana]
 gi|218546759|sp|Q9MA95.2|PP214_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g05240
 gi|332640689|gb|AEE74210.1| mitochondrial editing factor 19 [Arabidopsis thaliana]
          Length = 565

 Score =  352 bits (904), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 188/542 (34%), Positives = 300/542 (55%), Gaps = 14/542 (2%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECG---SLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           ++HG  IK+ +  +    + LI   + C    +L  AR +F+ +    V  W++MIRGY 
Sbjct: 24  QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYS 83

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
               P++AL   +EM      P       ++   + + D+  G  +H  VV+     ++ 
Sbjct: 84  NSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKT--GFEVN 141

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           + ++T L+ MY  CG + Y  ++F  + Q +VV+W  +ISG++  N  ++ +  F EM  
Sbjct: 142 MYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQS 201

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE--------FSLAMANALVDMY 320
             V  +E  ++ L++ CG    +  GKW H ++   GF+        F++ +A +L+DMY
Sbjct: 202 NGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMY 261

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
            KC ++R+AR LFDGM  + ++ WN++I+ Y+Q    ++A  +F+ M    + P++VT +
Sbjct: 262 AKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFL 321

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
            ++      G  ++G+ +H Y+ K G   D  +  ALV+MYAK GD   A + F +   +
Sbjct: 322 SVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKK 381

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSHAGLVTEGKSV 499
           D   W  ++ G   HG G EAL  F  M+  G   P+GIT++G+L ACSH GLV EG+  
Sbjct: 382 DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRY 441

Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK 559
           F +M    GL P +EHYGCMVD+L RAG  +EA  ++K+MP++PN+ +WGALL    +H+
Sbjct: 442 FAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHE 501

Query: 560 NPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           N  + +   + + E E    G  VL+SNIYA A RW DV  +R  MK  RV K  G SSV
Sbjct: 502 NLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSV 561

Query: 620 EV 621
           E 
Sbjct: 562 ET 563



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 226/426 (53%), Gaps = 9/426 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++  Y  +  P  AL  Y  M + G   D FT P +LKAC+ +     G  +HGF +
Sbjct: 75  WNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVV 134

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G + + YVS  L+ MY  CG +     +F+++P  +VV+W ++I G+       +A+E
Sbjct: 135 KTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIE 194

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD----EKLG--VAIA 212
             REM+   ++ +E  M+ ++       D+  GK  H  +     D     K+G  V +A
Sbjct: 195 AFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILA 254

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T+LIDMY+KCG+L  A+ LF+ + + ++VSW  +I+GY +  +  E + +F +M++  + 
Sbjct: 255 TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA 314

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P ++T LS+I      G  QLG+ +HAY+ + GF    A+  ALV+MY K  +  SA+  
Sbjct: 315 PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKA 374

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK-VSKVRPNEVTMVGLLSLCTEAGA 391
           F+ ++ KD + W  VI   A     ++A  +F  M+      P+ +T +G+L  C+  G 
Sbjct: 375 FEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGL 434

Query: 392 LEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMM 449
           +E G ++     +  GLE  V     +VD+ ++ G    A RL  +  +  ++ +W A++
Sbjct: 435 VEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALL 494

Query: 450 AGYGMH 455
            G  +H
Sbjct: 495 NGCDIH 500



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 105/216 (48%), Gaps = 3/216 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NS++T Y +N     AL ++  M   G   D  T  ++++A      + LG+ IH 
Sbjct: 282 LVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHA 341

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +  K G   DA +  AL+ MY++ G   SA+  F+++  +D ++W+ +I G    G   E
Sbjct: 342 YVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNE 401

Query: 156 ALEVMREMRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           AL + + M+   +  P  +  + ++   + +  V+ G+   A  +R+    +  V     
Sbjct: 402 ALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFA-EMRDLHGLEPTVEHYGC 460

Query: 215 LIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISG 249
           ++D+ S+ G    A++L   +  + +V  W  +++G
Sbjct: 461 MVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  352 bits (904), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 190/576 (32%), Positives = 320/576 (55%), Gaps = 14/576 (2%)

Query: 61  FMRKNG-SEVDNFTIPTILKACAQVLMTHLGKEIHGFAI--KNGLDGDAYVSNALIQMYS 117
            +R N  S      +  +LK  A      +GK IH   I      +      N+LI  Y+
Sbjct: 18  LLRPNAVSPSSPLDLIKLLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYA 77

Query: 118 ECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMI 176
           +   +  A  LFD MP R+VVSWS ++ GY   G   + + ++++M    ++ P+E  + 
Sbjct: 78  KVNQVSIAHNLFDRMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILA 137

Query: 177 SMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLF 232
             +S   D   V+ G+  H  ++      K G +    +  AL+ MYSKC  +  A  ++
Sbjct: 138 IAISSCCDRGRVEEGRQCHGLLL------KTGFSFHNYVRNALVSMYSKCSIVQDAMGVW 191

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
           N +  N +V++  ++S  +    + EG+ +   M+ E+V   ++T ++    C  +  L+
Sbjct: 192 NEVPVNDIVAYNSILSSLVENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLR 251

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
           LG  +H  +L +  E    +++A+++MYGKC +   AR +FDG++S++V++W AV+++  
Sbjct: 252 LGLHVHGKMLTSDVECDAYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCF 311

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
           Q  C ++A  LF  M+   V+ NE T   LL+ C    A   G  LH + EK G +  V+
Sbjct: 312 QNGCFEEALNLFSKMEQENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVM 371

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           +  AL++MYAK GD+  A ++FS+ ++RDI  WNAM+ G+  HG G++AL+ F DM  + 
Sbjct: 372 VGNALINMYAKSGDIEAAKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAE 431

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
             PN +TF G+L+AC H GLV EG      ++   G+ P +EHY C+V LL + G L+EA
Sbjct: 432 EHPNYVTFTGVLSACGHLGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEA 491

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVA 592
              +++ P++ +++ W  LL A  +H+N  +G   A  +LE++P + G   L+SNIYA  
Sbjct: 492 RNFMRTAPVKWDVVAWRTLLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKE 551

Query: 593 NRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            RW+ V  VR++M++ ++KKEPG S +E+  + H F
Sbjct: 552 KRWDGVVKVRKLMRDKKIKKEPGVSWIEIGNVTHIF 587



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 137/522 (26%), Positives = 251/522 (48%), Gaps = 49/522 (9%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYA 60
           +K+     NL+  +  H+H+I T          N +   NSL+  Y K N+ S A N++ 
Sbjct: 36  LKLSADTKNLKVGKTIHSHLIVTSRATE-----NSIIEVNSLINFYAKVNQVSIAHNLFD 90

Query: 61  FMRK----------NGSEVDNFTIPTI----------------------LKACAQVLMTH 88
            M +           G  ++ F++  I                      + +C       
Sbjct: 91  RMPERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVE 150

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
            G++ HG  +K G     YV NAL+ MYS+C  +  A  +++E+P  D+V++++++    
Sbjct: 151 EGRQCHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLV 210

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
             G   E LEV+R M    ++  +V  ++  SL A + D+ LG  +H  ++ +  D +  
Sbjct: 211 ENGYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTS--DVECD 268

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
             +++A+I+MY KCG    A+ +F+ L   +VV WT +++   +     E + LF++M +
Sbjct: 269 AYVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQ 328

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
           ENV  +E T   L+  C  +   + G  LH +  ++GF+  + + NAL++MY K  +I +
Sbjct: 329 ENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEA 388

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           A+ +F  M  +D++ WNA+I  ++      KA  +F  M  ++  PN VT  G+LS C  
Sbjct: 389 AKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGH 448

Query: 389 AGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWN 446
            G ++ G  +LH  +++ G++  +   T +V + +K G +N A      A  + D+  W 
Sbjct: 449 LGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWR 508

Query: 447 AMMAGYGMH---GCGEEALIFFVDMERSGVKPNGITFIGLLN 485
            ++    +H   G G     F ++M+     PN +    LL+
Sbjct: 509 TLLNACHVHQNYGLGRWVAEFVLEMD-----PNDVGTYTLLS 545


>gi|147840590|emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
          Length = 694

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 177/468 (37%), Positives = 279/468 (59%), Gaps = 17/468 (3%)

Query: 179 VSLFADVADVDLGKAIHACVVRNCK--DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLN 236
           +SL    ++    K IHA ++R     D      + TA     S   +L YA+Q+F+++ 
Sbjct: 39  LSLIDQCSETKQLKQIHAQMLRTGLFFDPFSASRLITAA--ALSPFPSLDYAQQVFDQIP 96

Query: 237 QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV-FPSEITILSLIIECGFVGGLQLGK 295
             ++ +W  +I  Y   +  ++ + +F  M+ ++  FP + T   LI     +  L  GK
Sbjct: 97  HPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGK 156

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
             H  +++      + + N+L+  Y KC E+     +F     +DV+ WN++I+A+ Q  
Sbjct: 157 AFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGG 216

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
           C ++A ELF  M+   V+PN +TMVG+LS C +    E G+W+H+YIE+  +   + L  
Sbjct: 217 CPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSN 276

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG------------MHGCGEEALI 463
           A++DMY KCG V  A RLF +   +DI  W  M+ GY             MHG G++A+ 
Sbjct: 277 AMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIA 336

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL 523
            F  M+   VKPN +TF  +L ACSH GLV EG++ F++M    G++P ++HY CMVD+L
Sbjct: 337 LFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDIL 396

Query: 524 GRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNV 583
           GRAGLL+EA E+I+ MP+ P   VWGALL A  +H+N  + E A +Q++E+EP N+G  V
Sbjct: 397 GRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAYV 456

Query: 584 LMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           L+SNIYA A +W+ V+G+R++M+++ +KKEPG SS+EV+G+VH+F+ G
Sbjct: 457 LLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVG 504



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 186/338 (55%), Gaps = 18/338 (5%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLM 86
           +  I +P L  +N+L+ +Y  ++ P  +L I+  M     +  D FT P ++KA +++  
Sbjct: 92  FDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEE 151

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
              GK  HG  IK  L  D ++ N+LI  Y++CG L     +F   P RDVVSW++MI  
Sbjct: 152 LFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITA 211

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           + +GG PEEALE+ +EM   +++P+ + M+ ++S  A  +D + G+ +H+ + RN   E 
Sbjct: 212 FVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXES 271

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN--------- 257
           L   ++ A++DMY+KCG++  AK+LF+++ +  +VSWT M+ GY +  E +         
Sbjct: 272 L--TLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHG 329

Query: 258 ---EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK-WLHAYILRNGFEFSLAMA 313
              + + LF++M E+ V P+ +T  +++  C  VG ++ G+ + +   L  G    +   
Sbjct: 330 HGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHY 389

Query: 314 NALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
             +VD+ G+   +  A  L + M  +    +W A++ A
Sbjct: 390 ACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGA 427



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 220/464 (47%), Gaps = 44/464 (9%)

Query: 32  IINP----LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           I NP    L R +SL T     N  S  LN       N     N    +++  C++   T
Sbjct: 3   IPNPCLVSLPRSHSLPTP----NPNSITLN-------NDRYFANHPTLSLIDQCSE---T 48

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMPNRDVVSWSTMIR 145
              K+IH   ++ GL  D + ++ LI     S   SL  A+ +FD++P+ ++ +W+T+IR
Sbjct: 49  KQLKQIHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIPHPNLYTWNTLIR 108

Query: 146 GYHRGGLPEEALEV-MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
            Y     P ++L + +R +      P +     ++   +++ ++  GKA H  V++    
Sbjct: 109 AYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVL-- 166

Query: 205 EKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
             LG  V I  +LI  Y+KCG L    ++F    +  VVSW  MI+ +++     E + L
Sbjct: 167 --LGSDVFILNSLIHFYAKCGELGLGYRVFVNXPRRDVVSWNSMITAFVQGGCPEEALEL 224

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F EM  +NV P+ IT++ ++  C      + G+W+H+YI RN    SL ++NA++DMY K
Sbjct: 225 FQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIXESLTLSNAMLDMYTK 284

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID------------KAFELFIHMKVS 370
           C  +  A+ LFD M  KD++ W  ++  YA+    D             A  LF  M+  
Sbjct: 285 CGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGLAMHGHGKDAIALFSKMQED 344

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE-KQGLEVDVILKTALVDMYAKCGDVNG 429
           KV+PN VT   +L  C+  G +E G+     +E   G+   V     +VD+  + G +  
Sbjct: 345 KVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEE 404

Query: 430 AYRLFSE-AIYRDICMWNAMMAGYGMHG---CGEEALIFFVDME 469
           A  L  +  +     +W A++    +H      E+A    +++E
Sbjct: 405 AVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELE 448


>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
          Length = 644

 Score =  352 bits (904), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 202/592 (34%), Positives = 315/592 (53%), Gaps = 50/592 (8%)

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSEC---GSLVSARYLFD 130
           +  +L+ C  V   H   ++H   + +G+D    V++ ++  Y      G +  AR LFD
Sbjct: 15  VRELLRRCGSV---HRLNQLHAHLVVHGVDD---VTSQILASYCALPAGGGVWYARQLFD 68

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
            +P+ D   ++++IR Y     P+EAL ++R M    I P+E  +  ++   A V   + 
Sbjct: 69  RIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEH 128

Query: 191 GKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
               H  VV      KLG    V +  AL+  Y+  G+L  +++ F+ +   +VVSW  M
Sbjct: 129 VMVTHGVVV------KLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSM 182

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           I+GY +     E   LF  M  + +   E T++SL+  C   G L+ GK +H+++L  G 
Sbjct: 183 INGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGC 242

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMK----------------------------- 337
              L +ANALVDMYGKC ++  A T FD M                              
Sbjct: 243 RIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQ 302

Query: 338 --SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
              K ++ WNA+IS Y Q     +A +L+  MK+  + P+E T+  +LS C + G L  G
Sbjct: 303 IPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASG 362

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           K +H  I        V L  +L+DMYA+CG V+ A  LFSE   +++  WNA++    MH
Sbjct: 363 KMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMH 422

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  ++AL+FF  M      P+ ITF+ LL+AC+H GL+  G+  F  M H   + P +EH
Sbjct: 423 GRAQDALMFFRSMVSDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEH 482

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y CMVDLLGR G L +A ++IK MP+RP+++VWGALL A ++H +  +G+    Q+LE+E
Sbjct: 483 YACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELE 542

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHK 627
             + G  VL+SN+    ++W D+  +R++M+E  +KK  G SS+E N  +H+
Sbjct: 543 GMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIETNSNIHE 594



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 144/456 (31%), Positives = 228/456 (50%), Gaps = 45/456 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YNSL+ +Y  ++ P  AL +   M + G   + FT+P +LKACA+V         HG  +
Sbjct: 78  YNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMVTHGVVV 137

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G  G  +V NAL+  Y+  GSL  +R  FDEM +R+VVSW++MI GY + G   EA  
Sbjct: 138 KLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACS 197

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIATALID 217
           +   MR   +   E  ++S++   +   +++ GK +H+  +VR C   ++ + +A AL+D
Sbjct: 198 LFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGC---RIDLILANALVD 254

Query: 218 MYSKCGNLAY-------------------------------AKQLFNRLNQNSVVSWTVM 246
           MY KCG+L                                 A+  F ++ + S++SW  M
Sbjct: 255 MYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAM 314

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           IS Y++    +E + L+  M    + P E T+ +++  CG +G L  GK +H  I  N  
Sbjct: 315 ISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFH 374

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
              +A+ N+L+DMY +C ++ +A +LF  M SK+V+ WNA+I A A       A   F  
Sbjct: 375 NPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRS 434

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL-----HTYIEKQGLEVDVILKTALVDMY 421
           M      P+E+T V LLS C   G LE G++      H Y  K G+E        +VD+ 
Sbjct: 435 MVSDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVE----HYACMVDLL 490

Query: 422 AKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHG 456
            + G +  A  L  +   R D+ +W A++    +HG
Sbjct: 491 GRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHG 526



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 114/231 (49%), Gaps = 2/231 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++++ Y++  +   AL++Y  M+  G   D FT+  +L AC Q+     GK IH    
Sbjct: 311 WNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIR 370

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            N  +    + N+L+ MY+ CG + +A  LF EMP+++V+SW+ +I      G  ++AL 
Sbjct: 371 DNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALM 430

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             R M      P E+  ++++S       ++ G+  +   +R+  + K GV     ++D+
Sbjct: 431 FFRSMVSDAFPPDEITFVALLSACNHGGLLEAGQ-YYFQAMRHVYNVKPGVEHYACMVDL 489

Query: 219 YSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
             + G LA A  L   +  +  VV W  ++        I  G ++  +++E
Sbjct: 490 LGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLE 540


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  352 bits (903), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 187/530 (35%), Positives = 308/530 (58%), Gaps = 6/530 (1%)

Query: 112 LIQMYSEC---GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI 168
           +I+  + C   G +  A   F E+   D++ W+ +I+GY +  + +  + +  +M+   +
Sbjct: 22  MIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQV 81

Query: 169 RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYA 228
            P+    + ++      +   +GK IH    +        V +  +L+ MY+K G ++YA
Sbjct: 82  HPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSN--VFVQNSLVSMYAKFGQISYA 139

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
           + +F++L+  +VVSWT +ISGY++  +  E + +F EM + NV P  I ++S++     V
Sbjct: 140 RIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNV 199

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
             L  GK +H  + + G EF   +  +L  MY K   +  AR  F+ M+  ++++WNA+I
Sbjct: 200 EDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMI 259

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
           S YA     ++A +LF  M    +R + +TM   +    + G+LE+ +WL  YI K    
Sbjct: 260 SGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYR 319

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            D  + T L+DMYAKCG +  A  +F     +D+ +W+ M+ GYG+HG G+EA+  + +M
Sbjct: 320 DDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEM 379

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
           +++GV PN  TFIGLL AC ++GLV EG  +F  M    G+ P  +HY C+VDLLGRAG 
Sbjct: 380 KQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDH-GIEPHHQHYSCVVDLLGRAGY 438

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNI 588
           L++A++ I SMP++P + VWGALL+A K+H+   +GEIAA Q+  ++P N G+ V +SN+
Sbjct: 439 LNQAYDFIMSMPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNL 498

Query: 589 YAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           YA A+ W  VA VR +M +  + K+ G SS+E+NG +  F  G   + KS
Sbjct: 499 YASAHLWTRVANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKS 548



 Score =  248 bits (633), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 137/422 (32%), Positives = 234/422 (55%), Gaps = 11/422 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y + N   + + +Y  M+ +    + FT   +LKAC    +  +GK+IHG   
Sbjct: 53  WNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTF 112

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   + +V N+L+ MY++ G +  AR +FD++ +R VVSW+++I GY + G P EAL 
Sbjct: 113 KYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALN 172

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATA 214
           V +EMR  +++P  +A++S+++ + +V D+  GK+IH  V       KLG+     I  +
Sbjct: 173 VFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVT------KLGLEFEPDIVIS 226

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L  MY+K G +  A+  FNR+ + +++ W  MISGY       E ++LF EMI +N+   
Sbjct: 227 LTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVD 286

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            IT+ S ++    VG L+L +WL  YI ++ +     +   L+DMY KC  I  AR +FD
Sbjct: 287 SITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFD 346

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            +  KDV++W+ +I  Y       +A  L+  MK + V PN+ T +GLL+ C  +G ++ 
Sbjct: 347 RVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKE 406

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR-LFSEAIYRDICMWNAMMAGYG 453
           G  L   +   G+E      + +VD+  + G +N AY  + S  I   + +W A+++   
Sbjct: 407 GWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACK 466

Query: 454 MH 455
           +H
Sbjct: 467 IH 468



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 85/156 (54%), Gaps = 1/156 (0%)

Query: 26  KFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV 84
           +F +  +  P L  +N++++ Y  N     A+ ++  M      VD+ T+ + + A AQV
Sbjct: 241 RFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQV 300

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
               L + + G+  K+    D +V+  LI MY++CGS+  AR +FD + ++DVV WS MI
Sbjct: 301 GSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMI 360

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
            GY   G  +EA+ +  EM+   + P++   I +++
Sbjct: 361 MGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLT 396


>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
          Length = 629

 Score =  352 bits (903), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 181/500 (36%), Positives = 293/500 (58%), Gaps = 11/500 (2%)

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
           +V +++ +I G+   G PEE  E  ++MR   + P +      +    DV ++   K IH
Sbjct: 103 NVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI---KKIH 159

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
             + +   +  L V I +AL++ Y K G + +A+  F  L    VV W  M++GY +  +
Sbjct: 160 GLLFKFGLE--LDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQ 217

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
               +  F  M +E+V PS  T+   +     +G L  G+ +H + ++ G++  +A++N+
Sbjct: 218 FEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNS 277

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
           L+DMYGKC+ I  A  +F+ M+ KD+  WN+++S + Q    D    L   M  + ++P+
Sbjct: 278 LIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPD 337

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTY-----IEKQGLEVD-VILKTALVDMYAKCGDVNG 429
            VT+  +L  C+   AL  G+ +H Y     + K G ++D V+LK A++DMYAKCG +  
Sbjct: 338 LVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRD 397

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A+ +F     +D+  WN M+ GYGMHG G EAL  F  M    +KP+ +TF+G+L+ACSH
Sbjct: 398 AHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSH 457

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           AG V++G++   +M     + P IEHY C++D+LGRAG LDEA+E+  +MP+  N +VW 
Sbjct: 458 AGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWR 517

Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR 609
           ALLAA +LHK+  + E+AA ++ E+EP++ G  VLMSN+Y    R+ +V  VR  M++  
Sbjct: 518 ALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQN 577

Query: 610 VKKEPGFSSVEVNGLVHKFI 629
           V+K PG S +E+   VH F+
Sbjct: 578 VRKTPGCSWIELKNGVHVFV 597



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 132/425 (31%), Positives = 226/425 (53%), Gaps = 13/425 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++++ +I N  P      Y  MR  G   D FT P  +KAC  VL     K+IHG   
Sbjct: 107 FNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACLDVLEI---KKIHGLLF 163

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+ D ++ +AL+  Y + G +  A+  F+E+P RDVV W+ M+ GY + G  E  LE
Sbjct: 164 KFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLE 223

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             R M    + PS   +   +S+FA + D++ G+ IH   ++   D   GVA++ +LIDM
Sbjct: 224 TFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDS--GVAVSNSLIDM 281

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC  +  A ++F  + +  + SW  ++S + +C + +  +RL   M+   + P  +T+
Sbjct: 282 YGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTV 341

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEF------SLAMANALVDMYGKCREIRSARTL 332
            +++  C  +  L  G+ +H Y++ +G          + + NA++DMY KC  +R A  +
Sbjct: 342 TTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLV 401

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ M +KDV  WN +I  Y      ++A E+F  M   +++P+EVT VG+LS C+ AG +
Sbjct: 402 FERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFV 461

Query: 393 EMGK-WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL-FSEAIYRDICMWNAMMA 450
             G+ +L     K  +   +   T ++DM  + G ++ AY L  +  I  +  +W A++A
Sbjct: 462 SQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLA 521

Query: 451 GYGMH 455
              +H
Sbjct: 522 ACRLH 526



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 163/328 (49%), Gaps = 14/328 (4%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I  +  +N++V  Y +  +    L  +  M         FT+   L   A +   + G+ 
Sbjct: 199 IRDVVLWNAMVNGYAQIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRI 258

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IHGFA+K G D    VSN+LI MY +C  +  A  +F+ M  +D+ SW++++  + + G 
Sbjct: 259 IHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGD 318

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV-----RNCKDEKL 207
            +  L ++  M    I+P  V + +++   + +A +  G+ IH  ++     ++ KD   
Sbjct: 319 HDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDID- 377

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            V +  A+IDMY+KCG++  A  +F R++   V SW +MI GY      NE + +F+ M 
Sbjct: 378 DVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMC 437

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA----NALVDMYGKC 323
           E  + P E+T + ++  C   G +  G+    ++++   ++ +A        ++DM G+ 
Sbjct: 438 EVQLKPDEVTFVGVLSACSHAGFVSQGR---NFLVQMKSKYDVAPTIEHYTCVIDMLGRA 494

Query: 324 REIRSARTLFDGMK-SKDVMIWNAVISA 350
            ++  A  L   M    + ++W A+++A
Sbjct: 495 GQLDEAYELALTMPIEANPVVWRALLAA 522


>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
 gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
          Length = 794

 Score =  352 bits (903), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 211/624 (33%), Positives = 336/624 (53%), Gaps = 32/624 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT-HLGKEIHGFA 97
           +NSL+ +     +   AL+    M   G  + +FT+ ++L AC+ +     LG+E H FA
Sbjct: 128 FNSLIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHLAEDLRLGREAHAFA 187

Query: 98  IKNG-LDGDA-YVSNALIQMYSECGSLVSARYLF-----DEMPNRDVVSWSTMIRGYHRG 150
           +KNG LDGD  +  NAL+ MY+  G +  A+ LF      ++P   VV+W+TM+    + 
Sbjct: 188 LKNGFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQS 247

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           G   EA+EV+ +M    +RP  V   S +   + +  + LG+ +HA V+++  D      
Sbjct: 248 GRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMHAYVLKDA-DLAANSF 306

Query: 211 IATALIDMYSKCGNLAYAKQLFNRL--NQNSVVSWTVMISGYIRCNEINEGVRLFAEM-I 267
           +A+AL+DMY+    +  A+ +F+ +   +  +  W  MI GY +     + + LFA M  
Sbjct: 307 VASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLDEDALELFARMET 366

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
           E  V PSE TI  ++  C         + +H Y+++ G   +  + NAL+D+Y +  ++ 
Sbjct: 367 EAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNALMDLYARLGDMD 426

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS----------------- 370
           +AR +F  ++ +DV+ WN +I+       I  AF+L   M+                   
Sbjct: 427 AARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAATEDGIAGADE 486

Query: 371 -KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
             V PN +T++ LL  C    A   GK +H Y  +  L+ DV + +ALVDMYAKCG +  
Sbjct: 487 EPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLAL 546

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACS 488
           +  +F     R++  WN ++  YGMHG G+EA+  F  M  S   KPN +TFI  L ACS
Sbjct: 547 SRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMVASDEAKPNEVTFIAALAACS 606

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM-PLRPNMIV 547
           H+G+V  G  +F  M    G+ P  + + C VD+LGRAG LDEA+ +I SM P    +  
Sbjct: 607 HSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDILGRAGRLDEAYRIISSMEPGEQQVSA 666

Query: 548 WGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
           W + L A +LH+N ++GEIAA ++ E+EP    + VL+ NIY+ A  W   + VR  M++
Sbjct: 667 WSSFLGACRLHRNVALGEIAAERLFELEPDEASHYVLLCNIYSAAGLWEKSSEVRSRMRQ 726

Query: 608 IRVKKEPGFSSVEVNGLVHKFIRG 631
             V KEPG S +E++G++H+F+ G
Sbjct: 727 RGVSKEPGCSWIELDGVIHRFMAG 750



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 152/525 (28%), Positives = 261/525 (49%), Gaps = 42/525 (8%)

Query: 69  VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL-DGDA-YVSNALIQMYSECGSLVSAR 126
           +D F +P   K+ A +      + IHG A+++ L DG    VSNAL+  Y+ CG L +A 
Sbjct: 55  LDRFALPPAAKSAAALRSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAAL 114

Query: 127 YLFDEMPNRDVVSWSTMIRG--YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
            LFD MP+RD V+++++I      R  LP  AL+ +R+M       +   ++S++   + 
Sbjct: 115 ALFDAMPSRDAVTFNSLIAALCLFRRWLP--ALDALRDMLLEGHPLTSFTLVSVLLACSH 172

Query: 185 VA-DVDLGKAIHACVVRNC---KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS- 239
           +A D+ LG+  HA  ++N     DE+       AL+ MY++ G +  A+ LF  +     
Sbjct: 173 LAEDLRLGREAHAFALKNGFLDGDERFAF---NALLSMYARLGLVDDAQTLFGSVGATDV 229

Query: 240 ----VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
               VV+W  M+S  ++     E + +  +M+   V P  +T  S +  C  +  L LG+
Sbjct: 230 PGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGR 289

Query: 296 WLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTLFDGMKS--KDVMIWNAVISAYA 352
            +HAY+L++     +  +A+ALVDMY     + +AR +FD + +  + + +WNA+I  YA
Sbjct: 290 EMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYA 349

Query: 353 QAHCIDKAFELFIHMKV-SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
           QA   + A ELF  M+  + V P+E T+ G+L  C  +      + +H Y+ K+G+  + 
Sbjct: 350 QAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNP 409

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
            ++ AL+D+YA+ GD++ A  +F+    RD+  WN ++ G  + G   +A     +M++ 
Sbjct: 410 FVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQ 469

Query: 472 G------------------VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
           G                  V PN IT + LL  C+       GK +    V    L   +
Sbjct: 470 GRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAVRH-ALDSDV 528

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
                +VD+  + G L  +  +   +P R N+I W  L+ A  +H
Sbjct: 529 AVGSALVDMYAKCGCLALSRAVFDRLPRR-NVITWNVLIMAYGMH 572


>gi|302788478|ref|XP_002976008.1| hypothetical protein SELMODRAFT_104228 [Selaginella moellendorffii]
 gi|300156284|gb|EFJ22913.1| hypothetical protein SELMODRAFT_104228 [Selaginella moellendorffii]
          Length = 495

 Score =  352 bits (903), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 179/492 (36%), Positives = 291/492 (59%), Gaps = 4/492 (0%)

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
            GL    +V N+L+ MY +CG +  AR  F+ M +R+V+SWSTM+  Y + G  ++AL +
Sbjct: 4   TGLCCGEFVGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVL 63

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
            ++M    + P+EV  +S++   A+   V+ G+ IH  V R   D  +G+ + TAL+ MY
Sbjct: 64  FQKMEEEGVEPNEVTFLSVLDACANAEAVEQGEMIHRLVARKKLD--VGLIVGTALVGMY 121

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            KC  L  A+Q+F+ + +  VV+W+ MIS Y +   + E ++LF  M  + V P+EI ++
Sbjct: 122 GKCSRLIEARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILM 181

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           S++  C   G L  GK  H  ++  GF   ++  N L+ MYGKC ++ SA+ +F GM+ +
Sbjct: 182 SILGACSSAGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERR 241

Query: 340 DVMIWNAVISAYAQ-AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           D++ W+A+++  A+  HC D AF  F  M +  V+P+ VT V LL  C+  GAL  G  +
Sbjct: 242 DLISWSAMLAVIAEHGHCKD-AFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGHVI 300

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           HT I  +G +  + ++ +L+DMY KCG +  A  +F    +R++  W  M+     H  G
Sbjct: 301 HTRIRAEGFQSVMYIENSLIDMYGKCGSLQAAREIFDRMSHRNVITWTTMITACVQHEQG 360

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +EAL  F +ME++GV+P+ + F+ ++++CSH+GLV EG+  F KMV      P +EH+  
Sbjct: 361 KEALELFEEMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVG 420

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           M+DLLGR+G L+EA E+++ MP+ P ++ W  LL+A K H +       A  +L + P +
Sbjct: 421 MLDLLGRSGKLNEAEELMEFMPVEPGVVGWNTLLSACKTHNDTERAGRVAGGMLVLGPGH 480

Query: 579 YGYNVLMSNIYA 590
            G  V  SNI +
Sbjct: 481 AGPYVSFSNILS 492



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 230/459 (50%), Gaps = 22/459 (4%)

Query: 28  SYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           ++ N+I+    ++++V +Y +      AL ++  M + G E +  T  ++L ACA     
Sbjct: 37  THRNVIS----WSTMVAAYAQRGDHDQALVLFQKMEEEGVEPNEVTFLSVLDACANAEAV 92

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
             G+ IH    +  LD    V  AL+ MY +C  L+ AR +FD +  +DVV+WSTMI  Y
Sbjct: 93  EQGEMIHRLVARKKLDVGLIVGTALVGMYGKCSRLIEARQVFDGIVEKDVVTWSTMISAY 152

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
            + G   EA+++   M    +RP+E+ ++S++   +    +  GK  H  VV  C     
Sbjct: 153 AQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSSAGALAEGKMTHELVVI-C---GF 208

Query: 208 GVAIATA--LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           G  ++T   LI MY KCG+LA AK +F  + +  ++SW+ M++         +    F  
Sbjct: 209 GADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAMLAVIAEHGHCKDAFVHFRR 268

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M  E V P  +T +SL+  C  +G L  G  +H  I   GF+  + + N+L+DMYGKC  
Sbjct: 269 MDLEGVKPDYVTFVSLLDACSLLGALVEGHVIHTRIRAEGFQSVMYIENSLIDMYGKCGS 328

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           +++AR +FD M  ++V+ W  +I+A  Q     +A ELF  M+ + V+P++V  + ++  
Sbjct: 329 LQAAREIFDRMSHRNVITWTTMITACVQHEQGKEALELFEEMEKAGVQPDQVAFLSIIHS 388

Query: 386 CTEAGALEMGK-WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS-EAIYRDIC 443
           C+ +G +E G+ +    +E Q     V     ++D+  + G +N A  L     +   + 
Sbjct: 389 CSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVGMLDLLGRSGKLNEAEELMEFMPVEPGVV 448

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
            WN +++    H           D ER+G    G+  +G
Sbjct: 449 GWNTLLSACKTHN----------DTERAGRVAGGMLVLG 477



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 84/157 (53%), Gaps = 10/157 (6%)

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
           ++  GL     +  +L++MY KCG V  A   F    +R++  W+ M+A Y   G  ++A
Sbjct: 1   MQATGLCCGEFVGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQA 60

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE----HYG 517
           L+ F  ME  GV+PN +TF+ +L+AC++A  V +G     +M+H L    K++       
Sbjct: 61  LVLFQKMEEEGVEPNEVTFLSVLDACANAEAVEQG-----EMIHRLVARKKLDVGLIVGT 115

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            +V + G+   L EA ++   + +  +++ W  +++A
Sbjct: 116 ALVGMYGKCSRLIEARQVFDGI-VEKDVVTWSTMISA 151


>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Cucumis sativus]
 gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38010-like [Cucumis sativus]
          Length = 583

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 191/555 (34%), Positives = 313/555 (56%), Gaps = 18/555 (3%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYS---ECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
           ++IH   + +GL  D +V++ +++ ++   E G   +  YL           ++++I GY
Sbjct: 22  RQIHAQLVTSGLVYDDFVTSKVMEFFANFVEYGDY-ACDYLEQGNTRLGSFPFNSLINGY 80

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
             G  P+ A+ V R M      P       ++   ++ +    G+ +H  VV      KL
Sbjct: 81  VGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVV------KL 134

Query: 208 GVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
           G+     +  +LI  Y  CG+ + A ++F+ +    VVSW  +ISG+++    +E + +F
Sbjct: 135 GLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAISVF 194

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
             M   +V PS  T++S++  C   G L  GK +H  I R  F+ +L + NA++DMY K 
Sbjct: 195 FRM---DVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERR-FKVNLVLGNAMLDMYVKN 250

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
                A+ +FD + ++D++ W  +I+   Q+    ++ ELF  M+   + P+ + +  +L
Sbjct: 251 GCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVL 310

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
           S C   G L+ G W+H YI ++G++ D+ + TA+VDMYAKCG +  A ++F     R+  
Sbjct: 311 SACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTF 370

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            WNA++ G  MHG   EAL  F  M  SGVKPN ITF+ +L AC H GLV EG+  FD M
Sbjct: 371 TWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNM 430

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
                L+PK+EHYGCM+DL  RAGLL+EA E+ ++MP++P++++WG LL A     N  +
Sbjct: 431 SKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACTTVGNIEL 490

Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
                  ILE++  + G  VL+SNI A+  RW++V  +RR+MK+  V+K PG S +EV+G
Sbjct: 491 SHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDRGVRKAPGSSVIEVDG 550

Query: 624 LVHKFIRGGMVNWKS 638
             H+F+ G + + ++
Sbjct: 551 KAHEFVVGDISHLQT 565



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 131/416 (31%), Positives = 224/416 (53%), Gaps = 14/416 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL+  Y+    P  A+++Y  M ++G   D FT P +LKAC+    +  G+++HG  +
Sbjct: 73  FNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVV 132

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL  D YV N+LI+ Y  CG    A  +FDEM  RDVVSW+++I G+ + G  +EA+ 
Sbjct: 133 KLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLISGFMKAGHFDEAIS 192

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V      MD+ PS   ++S+++  A   D+  GK IH  + R     K+ + +  A++DM
Sbjct: 193 VFFR---MDVEPSMTTLVSVLAACARNGDLCTGKGIHGVIERRF---KVNLVLGNAMLDM 246

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y K G    AK +F+ L    +VSWT+MI+G ++ +   + + LF+ M    + P  I +
Sbjct: 247 YVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIIL 306

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +G L  G W+H YI + G ++ + +  A+VDMY KC  I  A  +F  M  
Sbjct: 307 TSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQ 366

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           ++   WNA++   A    + +A  LF  M +S V+PNE+T + +L+ C   G ++ G+  
Sbjct: 367 RNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGR-- 424

Query: 399 HTYIEKQGLEVDVILKT----ALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMM 449
             Y +      +++ K      ++D++ + G +  A  L  +  +  D+ +W  ++
Sbjct: 425 -KYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIWGLLL 479



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 81/157 (51%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +  ++T  ++++ P  +L +++ MR  G   D   + ++L ACA +     G  +H 
Sbjct: 268 IVSWTIMITGLVQSDHPKQSLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHE 327

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +  + G+  D ++  A++ MY++CG +  A  +F  M  R+  +W+ ++ G    GL  E
Sbjct: 328 YINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHE 387

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           AL +   M    ++P+E+  +++++       VD G+
Sbjct: 388 ALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGR 424


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 217/646 (33%), Positives = 334/646 (51%), Gaps = 51/646 (7%)

Query: 14  RQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT 73
           R     I K+  K       + +  +N  ++SY++  + + AL ++  M +  S   N  
Sbjct: 42  RATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGM 101

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           I   L+     L   L  E+         + D    N +I+ Y    +L  AR LF+ MP
Sbjct: 102 ISGYLRNGEFELARKLFDEMP--------ERDLVSWNVMIKGYVRNRNLGKARELFEIMP 153

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD---- 189
            RDV SW+TM+ GY + G  ++A  V   M       ++V+  +++S +   + ++    
Sbjct: 154 ERDVCSWNTMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACM 209

Query: 190 --LGKAIHACVVRNC------KDEKL-------------GVAIATALIDMYSKCGNLAYA 228
               +   A V  NC      K +K+              V     +I  Y++ G +  A
Sbjct: 210 LFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA 269

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
           +QLF+      V +WT M+SGYI+   + E   LF +M E N    E++  +++   G+V
Sbjct: 270 RQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN----EVSWNAML--AGYV 323

Query: 289 GG--LQLGKWLHAYI-LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
            G  +++ K L   +  RN     ++  N ++  Y +C +I  A+ LFD M  +D + W 
Sbjct: 324 QGERMEMAKELFDVMPCRN-----VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWA 378

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
           A+I+ Y+Q+    +A  LF+ M+    R N  +    LS C +  ALE+GK LH  + K 
Sbjct: 379 AMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG 438

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
           G E    +  AL+ MY KCG +  A  LF E   +DI  WN M+AGY  HG GE AL FF
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFF 498

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
             M+R G+KP+  T + +L+ACSH GLV +G+  F  M    G++P  +HY CMVDLLGR
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGR 558

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLM 585
           AGLL++AH ++K+MP  P+  +WG LL AS++H N  + E AA +I  +EP+N G  VL+
Sbjct: 559 AGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLL 618

Query: 586 SNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           SN+YA + RW DV  +R  M++  VKK PG+S +E+    H F  G
Sbjct: 619 SNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVG 664


>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
 gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
 gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
          Length = 644

 Score =  352 bits (903), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 202/592 (34%), Positives = 315/592 (53%), Gaps = 50/592 (8%)

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSEC---GSLVSARYLFD 130
           +  +L+ C  V   H   ++H   + +G+D    V++ ++  Y      G +  AR LFD
Sbjct: 15  VRELLRRCGSV---HRLNQLHAHLVVHGVDD---VTSQILASYCALPAGGGVWYARQLFD 68

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
            +P+ D   ++++IR Y     P+EAL ++R M    I P+E  +  ++   A V   + 
Sbjct: 69  RIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEH 128

Query: 191 GKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
               H  VV      KLG    V +  AL+  Y+  G+L  +++ F+ +   +VVSW  M
Sbjct: 129 VMVTHGVVV------KLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSM 182

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           I+GY +     E   LF  M  + +   E T++SL+  C   G L+ GK +H+++L  G 
Sbjct: 183 INGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGC 242

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMK----------------------------- 337
              L +ANALVDMYGKC ++  A T FD M                              
Sbjct: 243 RIDLILANALVDMYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQ 302

Query: 338 --SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
              K ++ WNA+IS Y Q     +A +L+  MK+  + P+E T+  +LS C + G L  G
Sbjct: 303 IPEKSIISWNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASG 362

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           K +H  I        V L  +L+DMYA+CG V+ A  LFSE   +++  WNA++    MH
Sbjct: 363 KMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMH 422

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  ++AL+FF  M      P+ ITF+ LL+AC+H GL+  G+  F  M H   + P +EH
Sbjct: 423 GRAQDALMFFRSMVFDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEH 482

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y CMVDLLGR G L +A ++IK MP+RP+++VWGALL A ++H +  +G+    Q+LE+E
Sbjct: 483 YACMVDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELE 542

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHK 627
             + G  VL+SN+    ++W D+  +R++M+E  +KK  G SS+E N  +H+
Sbjct: 543 GMSGGLFVLISNMLYETHQWEDMKRLRKLMREWGMKKNMGVSSIETNSNIHE 594



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/456 (31%), Positives = 228/456 (50%), Gaps = 45/456 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YNSL+ +Y  ++ P  AL +   M + G   + FT+P +LKACA+V         HG  +
Sbjct: 78  YNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACARVQAWEHVMVTHGVVV 137

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G  G  +V NAL+  Y+  GSL  +R  FDEM +R+VVSW++MI GY + G   EA  
Sbjct: 138 KLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACS 197

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIATALID 217
           +   MR   +   E  ++S++   +   +++ GK +H+  +VR C   ++ + +A AL+D
Sbjct: 198 LFEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGC---RIDLILANALVD 254

Query: 218 MYSKCGNLAY-------------------------------AKQLFNRLNQNSVVSWTVM 246
           MY KCG+L                                 A+  F ++ + S++SW  M
Sbjct: 255 MYGKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAM 314

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           IS Y++    +E + L+  M    + P E T+ +++  CG +G L  GK +H  I  N  
Sbjct: 315 ISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFH 374

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
              +A+ N+L+DMY +C ++ +A +LF  M SK+V+ WNA+I A A       A   F  
Sbjct: 375 NPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALMFFRS 434

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL-----HTYIEKQGLEVDVILKTALVDMY 421
           M      P+E+T V LLS C   G LE G++      H Y  K G+E        +VD+ 
Sbjct: 435 MVFDAFPPDEITFVALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVE----HYACMVDLL 490

Query: 422 AKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHG 456
            + G +  A  L  +   R D+ +W A++    +HG
Sbjct: 491 GRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHG 526



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 115/231 (49%), Gaps = 2/231 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++++ Y++  +   AL++Y  M+  G   D FT+  +L AC Q+     GK IH    
Sbjct: 311 WNAMISCYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIR 370

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            N  +    + N+L+ MY+ CG + +A  LF EMP+++V+SW+ +I      G  ++AL 
Sbjct: 371 DNFHNPGVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQDALM 430

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             R M F    P E+  ++++S       ++ G+  +   +R+  + K GV     ++D+
Sbjct: 431 FFRSMVFDAFPPDEITFVALLSACNHGGLLEAGQ-YYFQAMRHVYNVKPGVEHYACMVDL 489

Query: 219 YSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
             + G LA A  L   +  +  VV W  ++        I  G ++  +++E
Sbjct: 490 LGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLE 540


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  352 bits (902), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 188/600 (31%), Positives = 325/600 (54%), Gaps = 2/600 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + + +   ++N +    L ++  M++ G  V   +  +  ++CA +   + G+++H  AI
Sbjct: 218 WGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAI 277

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KN    D  V  A++ +Y++  SL  AR  F  +PN  V + + M+ G  R GL  EA+ 
Sbjct: 278 KNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMG 337

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + + M    IR   V++  + S  A+      G+ +H   +++  D  + + +  A++D+
Sbjct: 338 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFD--VDICVNNAVLDL 395

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC  L  A  +F  + Q   VSW  +I+   +    ++ +  F EM+   + P + T 
Sbjct: 396 YGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTY 455

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  L+ G  +H  ++++G      +A+ +VDMY KC  I  A+ L D +  
Sbjct: 456 GSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGG 515

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           + V+ WNA++S ++     ++A + F  M    ++P+  T   +L  C     +E+GK +
Sbjct: 516 QQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQI 575

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I KQ +  D  + + LVDMYAKCGD+  +  +F +   RD   WNAM+ GY +HG G
Sbjct: 576 HGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLG 635

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F  M++  V PN  TF+ +L ACSH GL  +G   F  M     L P++EH+ C
Sbjct: 636 VEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFAC 695

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVD+LGR+    EA + I SMP + + ++W  LL+  K+ ++  + E+AA+ +L ++P +
Sbjct: 696 MVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDD 755

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
               +L+SN+YA + +W DV+  RR++K+ R+KKEPG S +EV   +H F+ G   + +S
Sbjct: 756 SSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRS 815



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 278/551 (50%), Gaps = 14/551 (2%)

Query: 13  TRQCHAHIIKTHFKFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN 71
           T   HA  I T     +  + +P +  +N+LV+ Y +      +++++  M + G   D 
Sbjct: 91  TAYSHAGDISTAVAL-FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDR 149

Query: 72  FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE 131
            T   +LK+C+ +    LG ++H  A+K GL+ D    +AL+ MY +C SL  A   F  
Sbjct: 150 TTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYG 209

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           MP R+ VSW   I G  +       LE+  EM+ + +  S+ +  S     A ++ ++ G
Sbjct: 210 MPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTG 269

Query: 192 KAIHACVVRN--CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
           + +HA  ++N    D  +G    TA++D+Y+K  +L  A++ F  L  ++V +   M+ G
Sbjct: 270 RQLHAHAIKNKFSSDRVVG----TAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 325

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
            +R     E + LF  MI  ++    +++  +   C    G   G+ +H   +++GF+  
Sbjct: 326 LVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVD 385

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           + + NA++D+YGKC+ +  A  +F GMK KD + WNA+I+A  Q    D     F  M  
Sbjct: 386 ICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR 445

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
             ++P++ T   +L  C    +LE G  +H  + K GL  D  + + +VDMY KCG ++ 
Sbjct: 446 FGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDE 505

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A +L      + +  WNA+++G+ ++   EEA  FF +M   G+KP+  TF  +L+ C++
Sbjct: 506 AQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCAN 565

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHY--GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
              +  GK +  +++    L    + Y    +VD+  + G + ++  + + +  R + + 
Sbjct: 566 LATIELGKQIHGQIIKQEML---DDEYISSTLVDMYAKCGDMPDSLLVFEKVEKR-DFVS 621

Query: 548 WGALLAASKLH 558
           W A++    LH
Sbjct: 622 WNAMICGYALH 632



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 146/561 (26%), Positives = 265/561 (47%), Gaps = 49/561 (8%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFA-------IKNGLDGDAYVSNALIQMYSECGSLVSA 125
           T   + ++CAQ      G+E            + +G   +A+VSN L+QMY+ C     A
Sbjct: 17  TFSRVFQSCAQA-----GREALAAGRAAHARMVVSGFVPNAFVSNCLLQMYARCAGAACA 71

Query: 126 RYLFDEMPNRDVVSWSTM-------------------------------IRGYHRGGLPE 154
           R +FD MP RD VSW+TM                               + GY + G+ +
Sbjct: 72  RRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQ 131

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           E++++  EM    + P       ++   + + ++ LG  +HA  V+     ++ V   +A
Sbjct: 132 ESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKT--GLEIDVRTGSA 189

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+DMY KC +L  A   F  + + + VSW   I+G ++  +   G+ LF EM    +  S
Sbjct: 190 LVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVS 249

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           + +  S    C  +  L  G+ LHA+ ++N F     +  A+VD+Y K   +  AR  F 
Sbjct: 250 QPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFF 309

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
           G+ +  V   NA++    +A    +A  LF  M  S +R + V++ G+ S C E      
Sbjct: 310 GLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQ 369

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G+ +H    K G +VD+ +  A++D+Y KC  +  AY +F     +D   WNA++A    
Sbjct: 370 GQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ 429

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           +G  ++ ++ F +M R G+KP+  T+  +L AC+    +  G  V DK++   GL     
Sbjct: 430 NGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAF 488

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE- 573
               +VD+  + G++DEA ++   +  +  ++ W A+L+   L+K     +   +++L+ 
Sbjct: 489 VASTVVDMYCKCGIIDEAQKLHDRIGGQ-QVVSWNAILSGFSLNKESEEAQKFFSEMLDM 547

Query: 574 -IEPQNYGYNVLMSNIYAVAN 593
            ++P ++ +  ++     +A 
Sbjct: 548 GLKPDHFTFATVLDTCANLAT 568



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 224/469 (47%), Gaps = 32/469 (6%)

Query: 10  LEQTRQCHAHIIKTHF---KFSYTNIINPLTRYNSLVTS--------------------- 45
           L   RQ HAH IK  F   +   T I++   + NSL  +                     
Sbjct: 266 LNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 325

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
            ++      A+ ++ FM ++    D  ++  +  ACA+      G+++H  AIK+G D D
Sbjct: 326 LVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVD 385

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
             V+NA++ +Y +C +L+ A  +F  M  +D VSW+ +I    + G  ++ +    EM  
Sbjct: 386 ICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR 445

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCG 223
             ++P +    S++   A +  ++ G  +H  V+++     LG    +A+ ++DMY KCG
Sbjct: 446 FGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS----GLGSDAFVASTVVDMYCKCG 501

Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLII 283
            +  A++L +R+    VVSW  ++SG+    E  E  + F+EM++  + P   T  +++ 
Sbjct: 502 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLD 561

Query: 284 ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
            C  +  ++LGK +H  I++        +++ LVDMY KC ++  +  +F+ ++ +D + 
Sbjct: 562 TCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS 621

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYI 402
           WNA+I  YA      +A  +F  M+   V PN  T V +L  C+  G  + G ++ H   
Sbjct: 622 WNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMT 681

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMA 450
               LE  +     +VD+  +      A +  +   ++ D  +W  +++
Sbjct: 682 THYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  352 bits (902), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 188/600 (31%), Positives = 325/600 (54%), Gaps = 2/600 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + + +   ++N +    L ++  M++ G  V   +  +  ++CA +   + G+++H  AI
Sbjct: 218 WGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAI 277

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KN    D  V  A++ +Y++  SL  AR  F  +PN  V + + M+ G  R GL  EA+ 
Sbjct: 278 KNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMG 337

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + + M    IR   V++  + S  A+      G+ +H   +++  D  + + +  A++D+
Sbjct: 338 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFD--VDICVNNAVLDL 395

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC  L  A  +F  + Q   VSW  +I+   +    ++ +  F EM+   + P + T 
Sbjct: 396 YGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTY 455

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  L+ G  +H  ++++G      +A+ +VDMY KC  I  A+ L D +  
Sbjct: 456 GSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGG 515

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           + V+ WNA++S ++     ++A + F  M    ++P+  T   +L  C     +E+GK +
Sbjct: 516 QQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQI 575

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I KQ +  D  + + LVDMYAKCGD+  +  +F +   RD   WNAM+ GY +HG G
Sbjct: 576 HGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLG 635

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F  M++  V PN  TF+ +L ACSH GL  +G   F  M     L P++EH+ C
Sbjct: 636 VEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFAC 695

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVD+LGR+    EA + I SMP + + ++W  LL+  K+ ++  + E+AA+ +L ++P +
Sbjct: 696 MVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDD 755

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
               +L+SN+YA + +W DV+  RR++K+ R+KKEPG S +EV   +H F+ G   + +S
Sbjct: 756 SSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRS 815



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 278/551 (50%), Gaps = 14/551 (2%)

Query: 13  TRQCHAHIIKTHFKFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN 71
           T   HA  I T     +  + +P +  +N+LV+ Y +      +++++  M + G   D 
Sbjct: 91  TAYSHAGDISTAVAL-FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDR 149

Query: 72  FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE 131
            T   +LK+C+ +    LG ++H  A+K GL+ D    +AL+ MY +C SL  A   F  
Sbjct: 150 TTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYG 209

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           MP R+ VSW   I G  +       LE+  EM+ + +  S+ +  S     A ++ ++ G
Sbjct: 210 MPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTG 269

Query: 192 KAIHACVVRN--CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
           + +HA  ++N    D  +G    TA++D+Y+K  +L  A++ F  L  ++V +   M+ G
Sbjct: 270 RQLHAHAIKNKFSSDRVVG----TAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 325

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
            +R     E + LF  MI  ++    +++  +   C    G   G+ +H   +++GF+  
Sbjct: 326 LVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVD 385

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           + + NA++D+YGKC+ +  A  +F GMK KD + WNA+I+A  Q    D     F  M  
Sbjct: 386 ICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR 445

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
             ++P++ T   +L  C    +LE G  +H  + K GL  D  + + +VDMY KCG ++ 
Sbjct: 446 FGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDE 505

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A +L      + +  WNA+++G+ ++   EEA  FF +M   G+KP+  TF  +L+ C++
Sbjct: 506 AQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCAN 565

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHY--GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
              +  GK +  +++    L    + Y    +VD+  + G + ++  + + +  R + + 
Sbjct: 566 LATIELGKQIHGQIIKQEML---DDEYISSTLVDMYAKCGDMPDSLLVFEKVEKR-DFVS 621

Query: 548 WGALLAASKLH 558
           W A++    LH
Sbjct: 622 WNAMICGYALH 632



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 146/561 (26%), Positives = 264/561 (47%), Gaps = 49/561 (8%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFA-------IKNGLDGDAYVSNALIQMYSECGSLVSA 125
           T   + ++CAQ      G+E            + +G    A+VSN L+QMY+ C     A
Sbjct: 17  TFSRVFQSCAQA-----GREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACA 71

Query: 126 RYLFDEMPNRDVVSWSTM-------------------------------IRGYHRGGLPE 154
           R +FD MP RD VSW+TM                               + GY + G+ +
Sbjct: 72  RRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQ 131

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           E++++  EM    + P       ++   + + ++ LG  +HA  V+     ++ V   +A
Sbjct: 132 ESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKT--GLEIDVRTGSA 189

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+DMY KC +L  A   F  + + + VSW   I+G ++  +   G+ LF EM    +  S
Sbjct: 190 LVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVS 249

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           + +  S    C  +  L  G+ LHA+ ++N F     +  A+VD+Y K   +  AR  F 
Sbjct: 250 QPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFF 309

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
           G+ +  V   NA++    +A    +A  LF  M  S +R + V++ G+ S C E      
Sbjct: 310 GLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQ 369

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G+ +H    K G +VD+ +  A++D+Y KC  +  AY +F     +D   WNA++A    
Sbjct: 370 GQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ 429

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           +G  ++ ++ F +M R G+KP+  T+  +L AC+    +  G  V DK++   GL     
Sbjct: 430 NGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAF 488

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE- 573
               +VD+  + G++DEA ++   +  +  ++ W A+L+   L+K     +   +++L+ 
Sbjct: 489 VASTVVDMYCKCGIIDEAQKLHDRIGGQ-QVVSWNAILSGFSLNKESEEAQKFFSEMLDM 547

Query: 574 -IEPQNYGYNVLMSNIYAVAN 593
            ++P ++ +  ++     +A 
Sbjct: 548 GLKPDHFTFATVLDTCANLAT 568



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 224/469 (47%), Gaps = 32/469 (6%)

Query: 10  LEQTRQCHAHIIKTHF---KFSYTNIINPLTRYNSLVTS--------------------- 45
           L   RQ HAH IK  F   +   T I++   + NSL  +                     
Sbjct: 266 LNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 325

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
            ++      A+ ++ FM ++    D  ++  +  ACA+      G+++H  AIK+G D D
Sbjct: 326 LVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVD 385

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
             V+NA++ +Y +C +L+ A  +F  M  +D VSW+ +I    + G  ++ +    EM  
Sbjct: 386 ICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR 445

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCG 223
             ++P +    S++   A +  ++ G  +H  V+++     LG    +A+ ++DMY KCG
Sbjct: 446 FGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS----GLGSDAFVASTVVDMYCKCG 501

Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLII 283
            +  A++L +R+    VVSW  ++SG+    E  E  + F+EM++  + P   T  +++ 
Sbjct: 502 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLD 561

Query: 284 ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
            C  +  ++LGK +H  I++        +++ LVDMY KC ++  +  +F+ ++ +D + 
Sbjct: 562 TCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS 621

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYI 402
           WNA+I  YA      +A  +F  M+   V PN  T V +L  C+  G  + G ++ H   
Sbjct: 622 WNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMT 681

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMA 450
               LE  +     +VD+  +      A +  +   ++ D  +W  +++
Sbjct: 682 THYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730


>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score =  352 bits (902), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 191/578 (33%), Positives = 316/578 (54%), Gaps = 6/578 (1%)

Query: 57  NIYAFMRK---NGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALI 113
            ++ F+R     G  ++  +   + K C  +     GK  H   ++   + + ++ N ++
Sbjct: 63  QVHEFIRNMDIAGISINPRSYEYLFKMCGTLGALSDGKLFHN-RLQRMANSNKFIDNCIL 121

Query: 114 QMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEV 173
           QMY +C S  +A   FD++ +RD+ SW+T+I  Y   G  +EA+ +   M  + I P+  
Sbjct: 122 QMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFS 181

Query: 174 AMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFN 233
              +++  FAD + +DLGK IH+ ++R   +    ++I T + +MY KCG L  A+   N
Sbjct: 182 IFSTLIMSFADPSMLDLGKQIHSQLIR--IEFAADISIETLISNMYVKCGWLDGAEVATN 239

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL 293
           ++ + S V+ T ++ GY +     + + LF++MI E V         ++  C  +G L  
Sbjct: 240 KMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYT 299

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           GK +H+Y ++ G E  +++   LVD Y KC    +AR  F+ +   +   W+A+I+ Y Q
Sbjct: 300 GKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQ 359

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
           +   D+A E+F  ++   V  N      +   C+    L  G  +H    K+GL   +  
Sbjct: 360 SGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSG 419

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
           ++A++ MY+KCG V+ A++ F      D   W A++  +  HG   EAL  F +M+ SGV
Sbjct: 420 ESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGV 479

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
           +PN +TFIGLLNACSH+GLV EGK   D M    G+ P I+HY CM+D+  RAGLL EA 
Sbjct: 480 RPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEAL 539

Query: 534 EMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVAN 593
           E+I+SMP  P+++ W +LL      +N  +G IAA  I  ++P +    V+M N+YA+A 
Sbjct: 540 EVIRSMPFEPDVMSWKSLLGGCWSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAG 599

Query: 594 RWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +W++ A  R++M E  ++KE   S + V G VH+F+ G
Sbjct: 600 KWDEAAQFRKMMAERNLRKEVSCSWIIVKGKVHRFVVG 637



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 205/420 (48%), Gaps = 8/420 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTI-PTILKACAQVLMTHLGKEIH 94
           L+ + +++++Y +  +   A+ ++  M   G  + NF+I  T++ + A   M  LGK+IH
Sbjct: 145 LSSWATIISAYTEEGRIDEAVGLFLRMLDLGI-IPNFSIFSTLIMSFADPSMLDLGKQIH 203

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
              I+     D  +   +  MY +CG L  A    ++M  +  V+ + ++ GY +     
Sbjct: 204 SQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAARNR 263

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIAT 213
           +AL +  +M    +         ++   A + D+  GK IH+ C+    + E   V++ T
Sbjct: 264 DALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESE---VSVGT 320

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
            L+D Y KC     A+Q F  +++ +  SW+ +I+GY +  + +  + +F  +  + V  
Sbjct: 321 PLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLL 380

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +     ++   C  V  L  G  +HA  ++ G    L+  +A++ MY KC ++  A   F
Sbjct: 381 NSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAF 440

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
             +   D + W A+I A+A      +A  LF  M+ S VRPN VT +GLL+ C+ +G ++
Sbjct: 441 LAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVK 500

Query: 394 MGK-WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAG 451
            GK +L +  +K G+   +     ++D+Y++ G +  A  +     +  D+  W +++ G
Sbjct: 501 EGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGG 560



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 163/322 (50%), Gaps = 9/322 (2%)

Query: 34  NPLTRYNS-----LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH 88
           N +TR ++     L+  Y +  +   AL +++ M   G E+D F    ILKACA +   +
Sbjct: 239 NKMTRKSAVACTGLMVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLY 298

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
            GK+IH + IK GL+ +  V   L+  Y +C    +AR  F+ +   +  SWS +I GY 
Sbjct: 299 TGKQIHSYCIKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYC 358

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           + G  + ALEV + +R   +  +     ++    + V+D+  G  IHA  ++  K     
Sbjct: 359 QSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIK--KGLVAY 416

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           ++  +A+I MYSKCG + YA Q F  +++   V+WT +I  +    + +E +RLF EM  
Sbjct: 417 LSGESAMITMYSKCGKVDYAHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQG 476

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGK-WLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
             V P+ +T + L+  C   G ++ GK +L +   + G   ++   N ++D+Y +   + 
Sbjct: 477 SGVRPNVVTFIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLL 536

Query: 328 SARTLFDGMK-SKDVMIWNAVI 348
            A  +   M    DVM W +++
Sbjct: 537 EALEVIRSMPFEPDVMSWKSLL 558



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/269 (18%), Positives = 116/269 (43%), Gaps = 3/269 (1%)

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           ++S  + F   +++   + N  + + A+   + +  E   +M ++ +  N  +   L  +
Sbjct: 30  LKSTHSSFRTHQNQQGQVENLHLISLAKQGKLRQVHEFIRNMDIAGISINPRSYEYLFKM 89

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
           C   GAL  GK  H  +++     +  +   ++ MY  C     A R F + + RD+  W
Sbjct: 90  CGTLGALSDGKLFHNRLQRMA-NSNKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSW 148

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
             +++ Y   G  +EA+  F+ M   G+ PN   F  L+ + +   ++  GK +  +++ 
Sbjct: 149 ATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIR 208

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
            +     I     + ++  + G LD A      M  +  +   G ++  ++  +N     
Sbjct: 209 -IEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDALL 267

Query: 566 IAATQILE-IEPQNYGYNVLMSNIYAVAN 593
           + +  I E +E   + +++++    A+ +
Sbjct: 268 LFSKMISEGVELDGFVFSIILKACAALGD 296


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 188/600 (31%), Positives = 325/600 (54%), Gaps = 2/600 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + + +   ++N +    L ++  M++ G  V   +  +  ++CA +   + G+++H  AI
Sbjct: 260 WGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAI 319

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           KN    D  V  A++ +Y++  SL  AR  F  +PN  V + + M+ G  R GL  EA+ 
Sbjct: 320 KNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMG 379

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + + M    IR   V++  + S  A+      G+ +H   +++  D  + + +  A++D+
Sbjct: 380 LFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFD--VDICVNNAVLDL 437

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC  L  A  +F  + Q   VSW  +I+   +    ++ +  F EM+   + P + T 
Sbjct: 438 YGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTY 497

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  L+ G  +H  ++++G      +A+ +VDMY KC  I  A+ L D +  
Sbjct: 498 GSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGG 557

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           + V+ WNA++S ++     ++A + F  M    ++P+  T   +L  C     +E+GK +
Sbjct: 558 QQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQI 617

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  I KQ +  D  + + LVDMYAKCGD+  +  +F +   RD   WNAM+ GY +HG G
Sbjct: 618 HGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLG 677

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL  F  M++  V PN  TF+ +L ACSH GL  +G   F  M     L P++EH+ C
Sbjct: 678 VEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFAC 737

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVD+LGR+    EA + I SMP + + ++W  LL+  K+ ++  + E+AA+ +L ++P +
Sbjct: 738 MVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDD 797

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
               +L+SN+YA + +W DV+  RR++K+ R+KKEPG S +EV   +H F+ G   + +S
Sbjct: 798 SSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRS 857



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 152/551 (27%), Positives = 278/551 (50%), Gaps = 14/551 (2%)

Query: 13  TRQCHAHIIKTHFKFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN 71
           T   HA  I T     +  + +P +  +N+LV+ Y +      +++++  M + G   D 
Sbjct: 133 TAYSHAGDISTAVAL-FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDR 191

Query: 72  FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE 131
            T   +LK+C+ +    LG ++H  A+K GL+ D    +AL+ MY +C SL  A   F  
Sbjct: 192 TTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYG 251

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           MP R+ VSW   I G  +       LE+  EM+ + +  S+ +  S     A ++ ++ G
Sbjct: 252 MPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTG 311

Query: 192 KAIHACVVRN--CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
           + +HA  ++N    D  +G    TA++D+Y+K  +L  A++ F  L  ++V +   M+ G
Sbjct: 312 RQLHAHAIKNKFSSDRVVG----TAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 367

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
            +R     E + LF  MI  ++    +++  +   C    G   G+ +H   +++GF+  
Sbjct: 368 LVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVD 427

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           + + NA++D+YGKC+ +  A  +F GMK KD + WNA+I+A  Q    D     F  M  
Sbjct: 428 ICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR 487

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
             ++P++ T   +L  C    +LE G  +H  + K GL  D  + + +VDMY KCG ++ 
Sbjct: 488 FGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDE 547

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A +L      + +  WNA+++G+ ++   EEA  FF +M   G+KP+  TF  +L+ C++
Sbjct: 548 AQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCAN 607

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHY--GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
              +  GK +  +++    L    + Y    +VD+  + G + ++  + + +  R + + 
Sbjct: 608 LATIELGKQIHGQIIKQEML---DDEYISSTLVDMYAKCGDMPDSLLVFEKVEKR-DFVS 663

Query: 548 WGALLAASKLH 558
           W A++    LH
Sbjct: 664 WNAMICGYALH 674



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 146/561 (26%), Positives = 264/561 (47%), Gaps = 49/561 (8%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFA-------IKNGLDGDAYVSNALIQMYSECGSLVSA 125
           T   + ++CAQ      G+E            + +G    A+VSN L+QMY+ C     A
Sbjct: 59  TFSRVFQSCAQA-----GREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAACA 113

Query: 126 RYLFDEMPNRDVVSWSTM-------------------------------IRGYHRGGLPE 154
           R +FD MP RD VSW+TM                               + GY + G+ +
Sbjct: 114 RRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQ 173

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           E++++  EM    + P       ++   + + ++ LG  +HA  V+     ++ V   +A
Sbjct: 174 ESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKT--GLEIDVRTGSA 231

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+DMY KC +L  A   F  + + + VSW   I+G ++  +   G+ LF EM    +  S
Sbjct: 232 LVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVS 291

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           + +  S    C  +  L  G+ LHA+ ++N F     +  A+VD+Y K   +  AR  F 
Sbjct: 292 QPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFF 351

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
           G+ +  V   NA++    +A    +A  LF  M  S +R + V++ G+ S C E      
Sbjct: 352 GLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQ 411

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G+ +H    K G +VD+ +  A++D+Y KC  +  AY +F     +D   WNA++A    
Sbjct: 412 GQQVHCLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQ 471

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           +G  ++ ++ F +M R G+KP+  T+  +L AC+    +  G  V DK++   GL     
Sbjct: 472 NGHYDDTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS-GLGSDAF 530

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE- 573
               +VD+  + G++DEA ++   +  +  ++ W A+L+   L+K     +   +++L+ 
Sbjct: 531 VASTVVDMYCKCGIIDEAQKLHDRIGGQ-QVVSWNAILSGFSLNKESEEAQKFFSEMLDM 589

Query: 574 -IEPQNYGYNVLMSNIYAVAN 593
            ++P ++ +  ++     +A 
Sbjct: 590 GLKPDHFTFATVLDTCANLAT 610



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/469 (25%), Positives = 224/469 (47%), Gaps = 32/469 (6%)

Query: 10  LEQTRQCHAHIIKTHF---KFSYTNIINPLTRYNSLVTS--------------------- 45
           L   RQ HAH IK  F   +   T I++   + NSL  +                     
Sbjct: 308 LNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 367

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
            ++      A+ ++ FM ++    D  ++  +  ACA+      G+++H  AIK+G D D
Sbjct: 368 LVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVD 427

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
             V+NA++ +Y +C +L+ A  +F  M  +D VSW+ +I    + G  ++ +    EM  
Sbjct: 428 ICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR 487

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCG 223
             ++P +    S++   A +  ++ G  +H  V+++     LG    +A+ ++DMY KCG
Sbjct: 488 FGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKS----GLGSDAFVASTVVDMYCKCG 543

Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLII 283
            +  A++L +R+    VVSW  ++SG+    E  E  + F+EM++  + P   T  +++ 
Sbjct: 544 IIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLD 603

Query: 284 ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
            C  +  ++LGK +H  I++        +++ LVDMY KC ++  +  +F+ ++ +D + 
Sbjct: 604 TCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVS 663

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYI 402
           WNA+I  YA      +A  +F  M+   V PN  T V +L  C+  G  + G ++ H   
Sbjct: 664 WNAMICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMT 723

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMA 450
               LE  +     +VD+  +      A +  +   ++ D  +W  +++
Sbjct: 724 THYKLEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 772


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 194/574 (33%), Positives = 324/574 (56%), Gaps = 11/574 (1%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           M + G   D F + +++ AC ++     G+ +H   I  G   D  +  AL+QMY++CGS
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           L  A+ +F+ M  +D+ +WS++I  Y R G  E A+ + R M    + P+ V     +  
Sbjct: 61  LDDAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGG 120

Query: 182 FADVADVDLGKAIHACVVRN--CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
            A VA +  G+AIH  ++ +   +D+ L      +L++MY KC  +  A+++F  +   +
Sbjct: 121 CASVAGLADGRAIHQRILASKVPQDDVL----QDSLLNMYLKCDEMVEARKVFEGMKARN 176

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIE-ENVFPSEITILSLIIECGFVGGLQLGKWLH 298
           V S+T MIS Y++  E  E + LF+ M + E + P+  T  +++     +G L+ G+ +H
Sbjct: 177 VRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVH 236

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
            ++   GF+ ++ + NALV MYGKC     AR +FD M +++V+ W ++I+AYAQ     
Sbjct: 237 RHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQ 296

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALV 418
           +A  LF  M V    P+ V+    L+ C   GAL+ G+ +H  + +  L     ++T+L+
Sbjct: 297 EALNLFKRMDVE---PSGVSFSSALNACALLGALDEGREIHHRVVEAHL-ASPQMETSLL 352

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
            MYA+CG ++ A R+F+    RD    NAM+A +  HG  ++AL  +  ME+ G+  +GI
Sbjct: 353 SMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGI 412

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           TF+ +L ACSH  LV + +  F  +V   G+VP +EHY CMVD+LGR+G L +A E++++
Sbjct: 413 TFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVET 472

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDV 598
           MP + + + W  LL+  K H + + GE AA ++ E+ P      V +SN+YA A R++D 
Sbjct: 473 MPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRFDDA 532

Query: 599 AGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
             VR+ M+E  V      S +E++  +H F  GG
Sbjct: 533 RRVRKEMEERGVTTPVAVSYIEIDNELHMFTSGG 566



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 120/477 (25%), Positives = 222/477 (46%), Gaps = 39/477 (8%)

Query: 10  LEQTRQCHAHIIKTHFKFSYTNI---------------------------INPLTRYNSL 42
           LE+ R+ H H+I T F+   T+I                           I  L  ++S+
Sbjct: 26  LEEGRRLHEHLIITGFR---TDIPLETALLQMYAKCGSLDDAKRVFEGMEIKDLFAWSSI 82

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           +++Y +  +   A+ +Y  M   G E +  T    L  CA V     G+ IH   + + +
Sbjct: 83  ISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKV 142

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
             D  + ++L+ MY +C  +V AR +F+ M  R+V S++ MI  Y + G   EALE+   
Sbjct: 143 PQDDVLQDSLLNMYLKCDEMVEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSR 202

Query: 163 MRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
           M  ++ I P+     +++     + +++ G+ +H  +     D    V +  AL+ MY K
Sbjct: 203 MSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRGFD--TNVVVQNALVTMYGK 260

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
           CG+   A+++F+ +   +V+SWT MI+ Y +     E + LF  M   +V PS ++  S 
Sbjct: 261 CGSPVEARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRM---DVEPSGVSFSSA 317

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +  C  +G L  G+ +H  ++      S  M  +L+ MY +C  +  AR +F+ MK++D 
Sbjct: 318 LNACALLGALDEGREIHHRVVEAHLA-SPQMETSLLSMYARCGSLDDARRVFNRMKTRDA 376

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL-EMGKWLHT 400
              NA+I+A+ Q     +A  ++  M+   +  + +T V +L  C+    + +   +  +
Sbjct: 377 FSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPADGITFVSVLVACSHTSLVADCRDFFQS 436

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHG 456
            +   G+   V     +VD+  + G +  A  L     Y+ D   W  +++G   HG
Sbjct: 437 LVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEELVETMPYQTDAVAWMTLLSGCKRHG 493


>gi|147771209|emb|CAN67545.1| hypothetical protein VITISV_030949 [Vitis vinifera]
          Length = 598

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 199/601 (33%), Positives = 344/601 (57%), Gaps = 25/601 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSE----VDNFTIPTILKACAQVLMTHLGK 91
           ++++ +++  +  +  P  A++ +  + +N  E     D+F   +++KAC ++     G+
Sbjct: 1   MSKWLTMIRRHASDANPFHAISFFKAIPRNQRENAPLDDHFVYASLIKACNRLSAIREGR 60

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSEC-GSLVSARYLFDEMPNRDVVSWSTMIRGY--- 147
            IH   ++ GLD +  V NAL+ +YS    S+  A  LFD++P + +V+ + MI G+   
Sbjct: 61  SIHCHVLRFGLDYNVNVLNALVYLYSSAEKSMGCACALFDKIPEKTIVTVNCMISGFVKN 120

Query: 148 ---HRG-GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
              H G GL    L    ++R   ++P+ V ++ ++S   +     +G ++H+   +   
Sbjct: 121 KRFHAGVGLFNRVLGGGFDLR---VKPNYVTLVILISGCVEFGRFSIGNSLHSYCCKTSL 177

Query: 204 DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
           D  L   +  ALI +Y++   +  A +LF+  N   +VSW  MI+GY + N+      LF
Sbjct: 178 D--LKNEVRNALIHLYAEFEYMDAAAKLFHETNVRDLVSWNTMIAGYAKNNDCRNAFSLF 235

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
            EM   NV    ++++SLI  C     L +GK +HA+I  +G E  +    AL++MY KC
Sbjct: 236 REMRIGNVECDRVSLVSLISACTNXRDLHMGKAVHAFIKVSGMEMMIHFETALINMYSKC 295

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
             I   R +FD +  +++  WN++I  Y +     +A  L+  ++  K++P+EVTM+GL+
Sbjct: 296 GSIELGRKVFDELADENIASWNSMIYGYVECGFNIEALSLWNVIQSRKIKPDEVTMLGLI 355

Query: 384 SLCTEAGALEMGKWLHTYIEKQG-LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           S C  +G L  G  +++YIE    L    +L  AL+DMYAKCG ++ A  +FS+   RD+
Sbjct: 356 SACRSSGDLHQGIQINSYIESSDHLSGSTVLCNALIDMYAKCGSMDRAETVFSKMPRRDV 415

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             W +++ GY ++G GEEAL+ F  M    ++PN +TF+G+L+AC HAGLV +GK+++D 
Sbjct: 416 ISWTSIIVGYAINGEGEEALLAFRKMGAEKIEPNSVTFLGVLSACDHAGLVDKGKNLYDI 475

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
           M     + PKIEH GCMVD+  RAG+L+EA++ +K MP+ PN +VW  L+ A ++H + +
Sbjct: 476 MCKYYHIEPKIEHCGCMVDMHARAGMLEEAYKFVKDMPVEPNAVVWRMLINACRVHGDFN 535

Query: 563 MGEIAATQILEIE----PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSS 618
           +G    + +++++    P+++   V+ SNI+A A RW+DV   R +M   +  K PG SS
Sbjct: 536 LGLNLVSGLIDVKTEHGPEDH---VISSNIFAEAGRWDDVLQERSLMVAQKAVKLPGKSS 592

Query: 619 V 619
           +
Sbjct: 593 I 593



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 168/326 (51%), Gaps = 4/326 (1%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           F  TN+   L  +N+++  Y KNN   +A +++  MR    E D  ++ +++ AC     
Sbjct: 204 FHETNV-RDLVSWNTMIAGYAKNNDCRNAFSLFREMRIGNVECDRVSLVSLISACTNXRD 262

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
            H+GK +H F   +G++   +   ALI MYS+CGS+   R +FDE+ + ++ SW++MI G
Sbjct: 263 LHMGKAVHAFIKVSGMEMMIHFETALINMYSKCGSIELGRKVFDELADENIASWNSMIYG 322

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           Y   G   EAL +   ++   I+P EV M+ ++S      D+  G  I++  + +     
Sbjct: 323 YVECGFNIEALSLWNVIQSRKIKPDEVTMLGLISACRSSGDLHQGIQINS-YIESSDHLS 381

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
               +  ALIDMY+KCG++  A+ +F+++ +  V+SWT +I GY    E  E +  F +M
Sbjct: 382 GSTVLCNALIDMYAKCGSMDRAETVFSKMPRRDVISWTSIIVGYAINGEGEEALLAFRKM 441

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR-NGFEFSLAMANALVDMYGKCRE 325
             E + P+ +T L ++  C   G +  GK L+  + +    E  +     +VDM+ +   
Sbjct: 442 GAEKIEPNSVTFLGVLSACDHAGLVDKGKNLYDIMCKYYHIEPKIEHCGCMVDMHARAGM 501

Query: 326 IRSARTLFDGMK-SKDVMIWNAVISA 350
           +  A      M    + ++W  +I+A
Sbjct: 502 LEEAYKFVKDMPVEPNAVVWRMLINA 527


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 190/511 (37%), Positives = 280/511 (54%), Gaps = 16/511 (3%)

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           MP R++VSW+ MI G  +     EA+     MR     P++ A  S +   A +  +++G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 192 KAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           K +H      C   K G+     + + L DMYSKCG +  A ++F  +     VSWT MI
Sbjct: 61  KQMH------CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMI 114

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
            GY +  E  E +  F +MI+E V   +  + S +  CG +   + G+ +H+ +++ GFE
Sbjct: 115 DGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFE 174

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKS--KDVMIWNAVISAYAQAHCIDKAFELFI 365
             + + NAL DMY K  ++ SA  +F G+ S  ++V+ +  +I  Y +   I+K   +F+
Sbjct: 175 SDIFVGNALTDMYSKAGDMESASNVF-GIDSECRNVVSYTCLIDGYVETEQIEKGLSVFV 233

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            ++   + PNE T   L+  C    ALE G  LH  + K   + D  + + LVDMY KCG
Sbjct: 234 ELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCG 293

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
            +  A + F E        WN++++ +G HG G++A+  F  M   GVKPN ITFI LL 
Sbjct: 294 LLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLT 353

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
            CSHAGLV EG   F  M    G+VP  EHY C++DLLGRAG L EA E I  MP  PN 
Sbjct: 354 GCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNA 413

Query: 546 IVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVM 605
             W + L A ++H +  MG++AA +++++EP+N G  VL+SNIYA   +W DV  VR  M
Sbjct: 414 FGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRM 473

Query: 606 KEIRVKKEPGFSSVEVNGLVHKFIRGGMVNW 636
           ++  VKK PG+S V+V    H F   G  +W
Sbjct: 474 RDGNVKKLPGYSWVDVGYKTHVF---GAEDW 501



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 221/428 (51%), Gaps = 13/428 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + ++++   +N+K S A+  +  MR  G     F   + ++ACA +    +GK++H 
Sbjct: 6   LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 65

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+K G+  + +V + L  MYS+CG++  A  +F+EMP +D VSW+ MI GY + G  EE
Sbjct: 66  LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 125

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAI 211
           AL   ++M   ++   +  + S +     +     G+++H+ VV      KLG    + +
Sbjct: 126 ALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVV------KLGFESDIFV 179

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQ-NSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
             AL DMYSK G++  A  +F   ++  +VVS+T +I GY+   +I +G+ +F E+  + 
Sbjct: 180 GNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG 239

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           + P+E T  SLI  C     L+ G  LHA +++  F+    +++ LVDMYGKC  +  A 
Sbjct: 240 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAI 299

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
             FD +     + WN+++S + Q      A ++F  M    V+PN +T + LL+ C+ AG
Sbjct: 300 QAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAG 359

Query: 391 ALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM-WNAM 448
            +E G  + ++  +  G+       + ++D+  + G +  A    +   +      W + 
Sbjct: 360 LVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSF 419

Query: 449 MAGYGMHG 456
           +    +HG
Sbjct: 420 LGACRIHG 427


>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 197/594 (33%), Positives = 322/594 (54%), Gaps = 48/594 (8%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           +S+ TS++ +  P   ++  A      S++   T+  +  + +   + +L  ++HG  ++
Sbjct: 2   SSISTSHLPS--PFKPVDFSAEKNIPTSKLPQKTVLKLFDSKSITSLQYL-TQLHGLVLR 58

Query: 100 NGLDGDAYVSNALIQMYS--ECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +G   D YVS AL++ Y+     +   A  +F  +PN +V  W+ +I+G        +A+
Sbjct: 59  SGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAI 118

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
                M  +D RP++    ++    +    V  G+ IH  VV++       V I +A I 
Sbjct: 119 YFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSD--VHIKSAGIH 175

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+  G L  A+++F    ++ VV W  MI GY++C  +     LFA+M  +N+      
Sbjct: 176 MYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNI------ 228

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
                           G W                 N +++   K   +  AR LFD M 
Sbjct: 229 ----------------GSW-----------------NVMINGLAKGGNLGDARKLFDEMS 255

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +D + W++++  Y  A    +A E+F  M+  + RP    +  +L+ C+  GA++ G+W
Sbjct: 256 ERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRW 315

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H Y+++  +++D +L TAL+DMYAKCG ++  + +F E   R+I  WNAM+ G  +HG 
Sbjct: 316 VHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGR 375

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            E+AL  F  ++   +KPNGIT +G+L AC+HAG V +G  +F  M    G+ P++EHYG
Sbjct: 376 AEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYG 435

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLLGR+GL  EA ++I SMP++PN  VWGALL A ++H N  + E     +LE+EPQ
Sbjct: 436 CMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQ 495

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           N G  VL+SNIYA   R++DV+ +R++MK+  +K  PG S V++NG VH+F  G
Sbjct: 496 NSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHEFKMG 549



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 190/406 (46%), Gaps = 76/406 (18%)

Query: 15  QCHAHIIKTHFKFS---YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVD 70
           +C+A+   ++F F+   +++I NP +  +N ++   ++NNK   A+  Y  M  + +  +
Sbjct: 73  KCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVID-ARPN 131

Query: 71  NFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYS------------- 117
            FT PT+ KAC+       G++IHG  +K+G+  D ++ +A I MY+             
Sbjct: 132 KFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFY 191

Query: 118 -----------------ECGSLVSARYLFDEMP--------------------------- 133
                            +CG L +A+ LF +MP                           
Sbjct: 192 SGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLF 251

Query: 134 ----NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
                RD +SWS+M+ GY   G  +EALE+ ++M+  + RP    + S+++  +++  +D
Sbjct: 252 DEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAID 311

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
            G+ +HA + RN    KL   + TAL+DMY+KCG L    ++F  + +  + +W  MI G
Sbjct: 312 QGRWVHAYLKRNSI--KLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGG 369

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG----GLQLGKWLHAYILRNG 305
                   + + LF+++ E  + P+ IT++ ++  C   G    GL++ + +  +    G
Sbjct: 370 LAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFY---G 426

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISA 350
            +  L     +VD+ G+      A  L + M  K +  +W A++ A
Sbjct: 427 VDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGA 472


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  352 bits (902), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 215/628 (34%), Positives = 339/628 (53%), Gaps = 37/628 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMT---HLGKEIH 94
           YNSL+++     +   AL+    M   G  +V +FT+ ++L AC+ +       LG+E H
Sbjct: 136 YNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAH 195

Query: 95  GFAIKNG-LDG--DAYVSNALIQMYSECGSLVSARYLFDEMP------NRDVVSWSTMIR 145
            FA+K G LD   + +  NAL+ MY+  G +  A+ LF            DVV+W+TMI 
Sbjct: 196 AFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWNTMIS 255

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
              +GG   EA+EV+ +M  + +RP  V   S +   + +  + LG+ +HA V+++  D 
Sbjct: 256 LLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKD-ADL 314

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS--VVSWTVMISGYIRCNEINEGVRLF 263
                +A+AL+DMY+    +A A+++F+ + + S  +  W  MI GY +     E + LF
Sbjct: 315 AANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELF 374

Query: 264 AEM-IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           + M  E    PSE T+  ++  C    G    + +H Y+++ G   +  + NAL+DMY +
Sbjct: 375 SRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYAR 434

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISA-YAQAHCIDKAFELFIHMKVS----------- 370
             E+  AR +F  +  +DV+ WN +I+    Q H  + AF+L   M++            
Sbjct: 435 LGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAE-AFQLVTEMQLPSPSPSSSSTTE 493

Query: 371 -----KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
                +  PN +T++ LL  C    A   GK +H Y  +  LE D+ + +ALVDMYAKCG
Sbjct: 494 EGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCG 553

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG-VKPNGITFIGLL 484
            +  +  +F     R++  WN ++  YGMHG G+EA+  F +M   G   PN +TFI  L
Sbjct: 554 CLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAAL 613

Query: 485 NACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM-PLRP 543
            ACSH+GLV  G  +F  M    G+ P  + + C+VD+LGRAG LDEA+ +I SM P   
Sbjct: 614 AACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQ 673

Query: 544 NMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRR 603
            +  W +LL A +LH+N  +GE+AA ++ E+EP    + VL+ NIY+ A  W+    VR 
Sbjct: 674 QVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRV 733

Query: 604 VMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            M+   V KEPG S +E++G +H+F+ G
Sbjct: 734 RMRRQGVAKEPGCSWIELDGAIHRFMAG 761



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 149/528 (28%), Positives = 249/528 (47%), Gaps = 41/528 (7%)

Query: 68  EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL--DGDAYVSNALIQMYSECGSLVSA 125
           ++D+F +P  +K+ A +      + +H  A++  L       V NAL+  Y+ CG L +A
Sbjct: 60  QLDHFALPPAIKSAAALRDARAARSLHAAALRRALLHRPSPAVGNALLTAYARCGDLDAA 119

Query: 126 RYLFDEMPN--RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFA 183
             LF       RD VS++++I         E AL+ +R+M   + R  +V+  ++VS+  
Sbjct: 120 LALFAATATELRDAVSYNSLISALCLFRQWERALDALRDM-LAEGR-HDVSSFTLVSVLL 177

Query: 184 DVADVD------LGKAIHA-CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL- 235
             + +       LG+  HA  + R   DE        AL+ MY++ G +  A+ LF    
Sbjct: 178 ACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTA 237

Query: 236 -----NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGG 290
                    VV+W  MIS  ++     E V +  +M+   V P  +T  S +  C  +  
Sbjct: 238 AAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEM 297

Query: 291 LQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTLFDGM--KSKDVMIWNAV 347
           L LG+ +HA +L++     +  +A+ALVDMY    ++ SAR +FD +   S+ + +WNA+
Sbjct: 298 LALGREMHAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAM 357

Query: 348 ISAYAQAHCIDKAFELFIHMKV-SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           I  YAQA   ++A ELF  M+  +   P+E TM G+L  C  +      + +H Y+ K+G
Sbjct: 358 ICGYAQAGMDEEALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRG 417

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
           +  +  ++ AL+DMYA+ G+++ A R+F+    RD+  WN ++ G  + G   EA     
Sbjct: 418 MAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVT 477

Query: 467 DM----------------ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           +M                E     PN IT + LL  C+       GK +    V    L 
Sbjct: 478 EMQLPSPSPSSSSTTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRH-ALE 536

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             I     +VD+  + G L  +  +   +P R N+I W  L+ A  +H
Sbjct: 537 SDIAVGSALVDMYAKCGCLAASRAVFDRLPRR-NVITWNVLIMAYGMH 583


>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
 gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
          Length = 650

 Score =  351 bits (901), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 184/462 (39%), Positives = 273/462 (59%), Gaps = 37/462 (8%)

Query: 205 EKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
           +KLG    V +  A +  +S  G++  A++LF+      VVSW  +I GY+R     E +
Sbjct: 148 QKLGFSADVFVVNAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREAL 207

Query: 261 RLFAEMIEEN--VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
            LF  ++E+   V P E+T++  +  C  +G L+LGK LH ++   G   ++ + NA++D
Sbjct: 208 ELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMD 267

Query: 319 MYGKCREIR-------------------------------SARTLFDGMKSKDVMIWNAV 347
           MY KC  +                                 AR LFD M  +DV  WNA+
Sbjct: 268 MYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNAL 327

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           ++ Y Q     +A  LF  M+ SKV PNE+TMV LLS C++ GALEMG W+H YI++  L
Sbjct: 328 MAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQL 387

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
            + V L T+LVDMYAKCG++  A  +F E   ++   W AM+ G   HG  +EA+ +F  
Sbjct: 388 YLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQR 447

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           M   G++P+ ITFIG+L+AC HAGLV EG+  F  M     L  K++HY CM+DLLGRAG
Sbjct: 448 MIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAG 507

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSN 587
            LDEA +++ +MP+ P+ +VWGAL  A ++H N ++GE AA +++E++P + G  VL++N
Sbjct: 508 HLDEAEQLVNTMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLAN 567

Query: 588 IYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +YA AN       VR +M+ + V+K PG S +E+NG+VH+FI
Sbjct: 568 MYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFI 609



 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 168/493 (34%), Positives = 261/493 (52%), Gaps = 49/493 (9%)

Query: 60  AFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSEC 119
           A +  + +  D+ T P +LKACA++     G  + G   K G   D +V NA +  +S  
Sbjct: 110 ALLCSSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVHFWSVS 169

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD----IRPSEVAM 175
           GS+V AR LFDE P RDVVSW+T+I GY R GLP EALE+    R ++    +RP EV M
Sbjct: 170 GSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELF--WRLVEDGKAVRPDEVTM 227

Query: 176 ISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL 235
           I  VS  A + D++LGK +H  V  + K  +  V +  A++DMY KCG+L  AK +F R+
Sbjct: 228 IGAVSGCAQMGDLELGKRLHEFV--DSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERI 285

Query: 236 NQNSVVSWTVMI-------------------------------SGYIRCNEINEGVRLFA 264
           +  +VVSWT MI                               +GY++  +  E + LF 
Sbjct: 286 DNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFH 345

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           EM E  V P+EIT+++L+  C  +G L++G W+H YI R+    S+A+  +LVDMY KC 
Sbjct: 346 EMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCG 405

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            I+ A  +F  +  K+ + W A+I   A     D+A E F  M    ++P+E+T +G+LS
Sbjct: 406 NIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLS 465

Query: 385 LCTEAGALEMGKWLHTYI-EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDI 442
            C  AG ++ G+   + + EK  LE  +   + ++D+  + G ++ A +L +   +  D 
Sbjct: 466 ACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDA 525

Query: 443 CMWNAMMAGYGMHG---CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
            +W A+     MHG    GE+A +  V+++ S    +GI ++ L N  + A +  +   V
Sbjct: 526 VVWGALFFACRMHGNITLGEKAAMKLVELDPSD---SGI-YVLLANMYAEANMRKKADKV 581

Query: 500 FDKMVH-GLGLVP 511
              M H G+  VP
Sbjct: 582 RVMMRHLGVEKVP 594



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 169/347 (48%), Gaps = 37/347 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLGKEIHGF 96
           +N+L+  Y+++  P  AL ++  + ++G  V  D  T+   +  CAQ+    LGK +H F
Sbjct: 190 WNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEF 249

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSL-------------------------------VSA 125
               G+     + NA++ MY +CGSL                                 A
Sbjct: 250 VDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDA 309

Query: 126 RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV 185
           R LFDEMP RDV  W+ ++ GY +    +EA+ +  EM+   + P+E+ M++++S  + +
Sbjct: 310 RMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQL 369

Query: 186 ADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
             +++G  +H  + R+     L VA+ T+L+DMY+KCGN+  A  +F  +   + ++WT 
Sbjct: 370 GALEMGMWVHHYIDRH--QLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTA 427

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYIL-RN 304
           MI G       +E +  F  MI+  + P EIT + ++  C   G ++ G+   + +  + 
Sbjct: 428 MICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKY 487

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
             E  +   + ++D+ G+   +  A  L + M    D ++W A+  A
Sbjct: 488 HLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMDPDAVVWGALFFA 534



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 122/242 (50%), Gaps = 2/242 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+  Y++N +   A+ ++  M+++  + +  T+  +L AC+Q+    +G  +H +  
Sbjct: 324 WNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYID 383

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++ L     +  +L+ MY++CG++  A  +F E+P+++ ++W+ MI G    G  +EA+E
Sbjct: 384 RHQLYLSVALGTSLVDMYAKCGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIE 443

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             + M  + ++P E+  I ++S       V  G+   + +      E+  +   + +ID+
Sbjct: 444 YFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLER-KMKHYSCMIDL 502

Query: 219 YSKCGNLAYAKQLFNRLNQNS-VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
             + G+L  A+QL N +  +   V W  +         I  G +   +++E +   S I 
Sbjct: 503 LGRAGHLDEAEQLVNTMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIY 562

Query: 278 IL 279
           +L
Sbjct: 563 VL 564


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  351 bits (901), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 184/591 (31%), Positives = 314/591 (53%), Gaps = 2/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +++ +   ++N++    L ++  M++ G  V   T  ++ ++CA +  + LG ++H  A+
Sbjct: 226 WSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHAL 285

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K     D  V  A + MY++C ++  A  LF  +P+ ++ S++ MI GY R     +A +
Sbjct: 286 KTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFK 345

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +++       EV++   +S  A +     G  +H   +++  +    + +A A++DM
Sbjct: 346 LFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKS--NLSSNICVANAILDM 403

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCG L  A  LF+ +     VSW  +I+   +     + +  F  M+   + P E T 
Sbjct: 404 YGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTY 463

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C        G  +H  I+++G    + + +ALVDMY KC  +  A  +   ++ 
Sbjct: 464 GSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEE 523

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           + ++ WNA+IS ++     + +   F HM    V P+  T   +L  C     + +GK +
Sbjct: 524 QTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQI 583

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + K  L  DV + + LVDMY+KCG+++ +  +F +A  RD   WNAM+ G+  HG G
Sbjct: 584 HAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLG 643

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           EEAL  F  M    +KPN  TF+ +L ACSH G   +G   F KM     L P++EHY C
Sbjct: 644 EEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSC 703

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVD+LGR+G ++EA  +I+ MP   + I+W  LL+  K+  N  + E AA+ +L+++P++
Sbjct: 704 MVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPED 763

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
                L+SNIYA A  W  V+ +R+ M+   +KKEPG S +EV   VH F+
Sbjct: 764 SSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFL 814



 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 150/523 (28%), Positives = 272/523 (52%), Gaps = 4/523 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +NSL++ Y++N     ++ ++  MR  G   D+ T+   LK C+ +    LG +IHG
Sbjct: 122 VVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHG 181

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A++ G D D    +AL+ MY++C SL  +  +F E+P+++ +SWS  I G  +      
Sbjct: 182 IAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLR 241

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            L++ +EM+   I  S+    S+    A ++   LG  +H   ++   D    V + TA 
Sbjct: 242 GLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKT--DFGSDVIVGTAT 299

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+KC N++ A +LF+ L  +++ S+  MI GY R  +  +  +LF ++ + +    E
Sbjct: 300 LDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDE 359

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +++   +     + G   G  LH   +++    ++ +ANA++DMYGKC  +  A  LFD 
Sbjct: 360 VSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDE 419

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M+ +D + WNA+I+A  Q     K    F  M  SK+ P+E T   +L  C    A   G
Sbjct: 420 MEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNG 479

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H  I K G+ + + + +ALVDMY+KCG +  A ++      + +  WNA+++G+ + 
Sbjct: 480 MEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQ 539

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
              E++  FF  M   GV+P+  T+  +L+ C++   V  GK +  +M+  L L+  +  
Sbjct: 540 KKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIK-LELLSDVYI 598

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
              +VD+  + G + ++  M +  P R + + W A++     H
Sbjct: 599 TSTLVDMYSKCGNMHDSLLMFRKAPKRDS-VTWNAMICGFAYH 640



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 153/556 (27%), Positives = 263/556 (47%), Gaps = 40/556 (7%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           T   I + C+       GKE H   I +G     +V+N LIQMY +C +L  A  +F+EM
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 133 PNRDVVSWSTM--------------------------------IRGYHRGGLPEEALEVM 160
           P RD+VSW+TM                                I GY + G  ++++ V 
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
            +MR + +      +   + + + + D  LG  IH   V+   D    V   +AL+DMY+
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFD--YDVVTGSALVDMYA 203

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           KC +L  +  +F+ L   + +SW+  I+G ++ +++  G++LF EM  + +  S+ T  S
Sbjct: 204 KCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYAS 263

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           +   C  +   +LG  LH + L+  F   + +  A +DMY KC  +  A  LF  +   +
Sbjct: 264 VFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHN 323

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           +  +NA+I  YA+     +AF+LF+ ++ +    +EV++ G LS          G  LH 
Sbjct: 324 LQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHG 383

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
              K  L  ++ +  A++DMY KCG +  A  LF E   RD   WNA++     +    +
Sbjct: 384 LAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGK 443

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCM 519
            L  F  M RS ++P+  T+  +L AC+     + G  V  +++  G+GL  K+     +
Sbjct: 444 TLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGL--KMFVGSAL 501

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQ 577
           VD+  + G+++EA E I        M+ W A+++   L K     +   + +LE  +EP 
Sbjct: 502 VDMYSKCGMMEEA-EKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPD 560

Query: 578 NYGYNVLMSNIYAVAN 593
           N+ Y  ++     +A 
Sbjct: 561 NFTYATVLDTCANLAT 576



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 210/420 (50%), Gaps = 10/420 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  YN+++  Y +N +   A  ++  ++KN    D  ++   L A A +     G ++HG
Sbjct: 324 LQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHG 383

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            AIK+ L  +  V+NA++ MY +CG+LV A  LFDEM  RD VSW+ +I    +     +
Sbjct: 384 LAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGK 443

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            L     M    + P E    S++   A       G  +H  ++++    K+ V   +AL
Sbjct: 444 TLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFV--GSAL 501

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMYSKCG +  A+++  RL + ++VSW  +ISG+    +  +  R F+ M+E  V P  
Sbjct: 502 VDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDN 561

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T  +++  C  +  + LGK +HA +++      + + + LVDMY KC  +  +  +F  
Sbjct: 562 FTYATVLDTCANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRK 621

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
              +D + WNA+I  +A     ++A ELF HM    ++PN  T V +L  C+  G  + G
Sbjct: 622 APKRDSVTWNAMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKG 681

Query: 396 KWLHTYIEKQ----GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMA 450
            +   Y +K      LE  +   + +VD+  + G V  A RL  +  +  D  +W  +++
Sbjct: 682 LF---YFQKMASIYALEPQLEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLS 738



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 93/170 (54%), Gaps = 4/170 (2%)

Query: 22  KTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC 81
           K H++     +++    +N++++ +    K   +   ++ M + G E DNFT  T+L  C
Sbjct: 516 KIHYRLEEQTMVS----WNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTC 571

Query: 82  AQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWS 141
           A +    LGK+IH   IK  L  D Y+++ L+ MYS+CG++  +  +F + P RD V+W+
Sbjct: 572 ANLATVGLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWN 631

Query: 142 TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
            MI G+   GL EEALE+   M   +I+P+    +S++   + V +   G
Sbjct: 632 AMICGFAYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKG 681


>gi|57899090|dbj|BAD86909.1| putative PPR986-12 [Oryza sativa Japonica Group]
          Length = 560

 Score =  351 bits (901), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 193/522 (36%), Positives = 291/522 (55%), Gaps = 8/522 (1%)

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI 168
           +  LI      G++  AR LFDEMP RDVV+W+ M+ GY   GL  EAL+V R M     
Sbjct: 6   ATTLISSLCSRGAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGA 65

Query: 169 RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN-LAY 227
            P+E  + S+++         +   +HA  VR   D      +  ALID Y+     +  
Sbjct: 66  APNEYTLSSVLTACRGPCAPAMAMPLHAVAVRRGVDRM--PYVVNALIDSYASLAEGVVD 123

Query: 228 AKQLFNRLNQ-NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
           A++LF+ L    +  SWT MI+GY R  +   G+RLF  M+++ V  S       +  C 
Sbjct: 124 ARRLFDALGSGRTAASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALHACT 183

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
            V  L LG+ LH   ++   + +LA+ N+L+DMY  C  I  AR+LFDG   ++++ WN 
Sbjct: 184 LVIDLCLGQQLHLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNT 243

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           +I+ Y+Q   +  A +L + M      PN  T+  + S C +  AL  GK +H  + ++ 
Sbjct: 244 MIAGYSQCDPL-MALQLLLEMND---EPNCFTLTSITSACADLAALRCGKQVHGAVLRRS 299

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
              D+ +  ALVDMY+KCG +  A  +F     +D   W +M+AGYGM+G G EA+  F 
Sbjct: 300 YSDDLQMGNALVDMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFS 359

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRA 526
            M  +GV P+ + F+ L+++CSHAGLV EG + F  M++   L P  E YG +V+LL RA
Sbjct: 360 SMIHAGVHPDHVVFLSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARA 419

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMS 586
           G L EA ++I +MP  P+  VWGALL ASK+H N  MG +AA +I EI P +    ++++
Sbjct: 420 GRLREALDLIDTMPFAPDEYVWGALLGASKMHNNVEMGRLAARKITEINPDDVKNYIMLA 479

Query: 587 NIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           +IYA  ++W + A  RR ++ I  +KE G S +EV   ++ F
Sbjct: 480 SIYAAGSKWGEYAFTRRSLRGIGSRKEAGISWIEVMDKMYSF 521



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 213/421 (50%), Gaps = 10/421 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + ++++ Y  N     AL+++  M   G+  + +T+ ++L AC       +   +H  A+
Sbjct: 37  WTAMLSGYASNGLRREALDVFRRMVAAGAAPNEYTLSSVLTACRGPCAPAMAMPLHAVAV 96

Query: 99  KNGLDGDAYVSNALIQMYSECGS-LVSARYLFDEM-PNRDVVSWSTMIRGYHRGGLPEEA 156
           + G+D   YV NALI  Y+     +V AR LFD +   R   SW++MI GY R G     
Sbjct: 97  RRGVDRMPYVVNALIDSYASLAEGVVDARRLFDALGSGRTAASWTSMIAGYARWGQERTG 156

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           L + + M    +  S  A    +     V D+ LG+ +H   ++   D  L  A+  +LI
Sbjct: 157 LRLFKTMLKDGVELSTFACSIALHACTLVIDLCLGQQLHLQCIKKALDVNL--AVVNSLI 214

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           DMY  C  +  A+ LF+   + ++++W  MI+GY +C+ +   ++L  EM +E   P+  
Sbjct: 215 DMYCTCARILDARSLFDGTPERNLITWNTMIAGYSQCDPL-MALQLLLEMNDE---PNCF 270

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T+ S+   C  +  L+ GK +H  +LR  +   L M NALVDMY KC  I +A+ +FD M
Sbjct: 271 TLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQMGNALVDMYSKCGSITNAKNVFDRM 330

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG- 395
             KD   W ++I+ Y      ++A +LF  M  + V P+ V  + L+S C+ AG ++ G 
Sbjct: 331 GCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHVVFLSLISSCSHAGLVDEGW 390

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGM 454
            +  + I +  L+ +  +  ++V++ A+ G +  A  L     +  D  +W A++    M
Sbjct: 391 NFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLIDTMPFAPDEYVWGALLGASKM 450

Query: 455 H 455
           H
Sbjct: 451 H 451



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 189/372 (50%), Gaps = 14/372 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + S++  Y +  +  + L ++  M K+G E+  F     L AC  V+   LG+++H   I
Sbjct: 140 WTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALHACTLVIDLCLGQQLHLQCI 199

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K  LD +  V N+LI MY  C  ++ AR LFD  P R++++W+TMI GY +   P  AL+
Sbjct: 200 KKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTMIAGYSQCD-PLMALQ 258

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++ E   M+  P+   + S+ S  AD+A +  GK +H  V+R    + L   +  AL+DM
Sbjct: 259 LLLE---MNDEPNCFTLTSITSACADLAALRCGKQVHGAVLRRSYSDDL--QMGNALVDM 313

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSKCG++  AK +F+R+      SWT MI+GY      NE V+LF+ MI   V P  +  
Sbjct: 314 YSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHVVF 373

Query: 279 LSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           LSLI  C   G +  G  +  + I     + +  +  ++V++  +   +R A  L D M 
Sbjct: 374 LSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLIDTMP 433

Query: 338 -SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
            + D  +W A++ A    + ++         K++++ P++V    +L+    AG+    K
Sbjct: 434 FAPDEYVWGALLGASKMHNNVEMG--RLAARKITEINPDDVKNYIMLASIYAAGS----K 487

Query: 397 WLHTYIEKQGLE 408
           W      ++ L 
Sbjct: 488 WGEYAFTRRSLR 499



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 90/174 (51%), Gaps = 5/174 (2%)

Query: 18  AHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTI 77
           A I+     F  T   N +T +N+++  Y + + P  AL +   M     E + FT+ +I
Sbjct: 221 ARILDARSLFDGTPERNLIT-WNTMIAGYSQCD-PLMALQLLLEMND---EPNCFTLTSI 275

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
             ACA +     GK++HG  ++     D  + NAL+ MYS+CGS+ +A+ +FD M  +D 
Sbjct: 276 TSACADLAALRCGKQVHGAVLRRSYSDDLQMGNALVDMYSKCGSITNAKNVFDRMGCKDK 335

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
            SW++MI GY   G   EA+++   M    + P  V  +S++S  +    VD G
Sbjct: 336 FSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHVVFLSLISSCSHAGLVDEG 389


>gi|356533824|ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 630

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 193/568 (33%), Positives = 318/568 (55%), Gaps = 22/568 (3%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +L+ C  +    L ++ H   + NG   +A+++  L+  Y+ CG L ++R++F+ +  + 
Sbjct: 34  LLQLCIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYATCGELATSRFVFESVEAKS 93

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           V  W+++I GY +     +AL + REM    + P +  + ++  +F ++ D+  GK IH 
Sbjct: 94  VYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATVFKVFGELEDLVSGKLIHG 153

Query: 197 CVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI- 251
                 K  ++G    V +  +L+ MY +CG    A ++F+     +V S+ V+ISG   
Sbjct: 154 ------KGIRIGFVSDVVVGNSLMSMYCRCGEFGDAVKVFDETPHRNVGSFNVVISGCAA 207

Query: 252 --RCN--EINEGVRLFAEMIEENVFPSEITILSLI-IECGFVGGLQLGKWLHAYILRNGF 306
              CN    ++    F  M  E       T+ SL+ + CG  G    G+ LH Y+++NG 
Sbjct: 208 LENCNFTSHDDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWDYGRELHCYVVKNGL 267

Query: 307 EFSLA----MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
           +  +     + ++L+DMY + +++   R +FD MK+++V +W A+I+ Y Q    D A  
Sbjct: 268 DLKMDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKNRNVYVWTAMINGYVQNGAPDDALV 327

Query: 363 LFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
           L   M++   +RPN+V+++  L  C     L  GK +H +  K  L  DV L  AL+DMY
Sbjct: 328 LLRAMQMKDGIRPNKVSLISALPACGLLAGLIGGKQIHGFSIKMELNDDVSLCNALIDMY 387

Query: 422 AKCGDVNGAYRLFSEAIY-RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           +KCG ++ A R F  + Y +D   W++M++ YG+HG GEEA+I +  M + G KP+ IT 
Sbjct: 388 SKCGSLDYARRAFETSSYFKDAITWSSMISAYGLHGRGEEAIIAYYKMLQQGFKPDMITV 447

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
           +G+L+ACS +GLV EG S++  ++    + P +E   C+VD+LGR+G LD+A E IK MP
Sbjct: 448 VGVLSACSKSGLVDEGISIYKSLMTKYEIKPTVEICACVVDMLGRSGQLDQALEFIKEMP 507

Query: 541 LRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAG 600
           L P   VWG+LL AS +H N    ++A   +LE+EP+N    + +SN YA   RW+ V  
Sbjct: 508 LDPGPSVWGSLLTASVIHGNSRTRDLAYRHLLELEPENPSNYISLSNTYASDRRWDVVTE 567

Query: 601 VRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           VR +MKE  +KK PG S + ++G  H F
Sbjct: 568 VRTIMKERGLKKVPGCSWITISGKTHSF 595



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 225/430 (52%), Gaps = 12/430 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NSL+  Y+KN+    AL ++  M +NG   D++T+ T+ K   ++     GK IHG  I
Sbjct: 97  WNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATVFKVFGELEDLVSGKLIHGKGI 156

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH-----RGGLP 153
           + G   D  V N+L+ MY  CG    A  +FDE P+R+V S++ +I G            
Sbjct: 157 RIGFVSDVVVGNSLMSMYCRCGEFGDAVKVFDETPHRNVGSFNVVISGCAALENCNFTSH 216

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSL-FADVADVDLGKAIHACVVRNCKDEKL--GVA 210
           ++       M+    +     + S++ +   D    D G+ +H  VV+N  D K+   V 
Sbjct: 217 DDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWDYGRELHCYVVKNGLDLKMDSDVH 276

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM-IEE 269
           + ++LIDMYS+   +   +++F+++   +V  WT MI+GY++    ++ + L   M +++
Sbjct: 277 LGSSLIDMYSRSKKVVLGRRVFDQMKNRNVYVWTAMINGYVQNGAPDDALVLLRAMQMKD 336

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            + P++++++S +  CG + GL  GK +H + ++      +++ NAL+DMY KC  +  A
Sbjct: 337 GIRPNKVSLISALPACGLLAGLIGGKQIHGFSIKMELNDDVSLCNALIDMYSKCGSLDYA 396

Query: 330 RTLFDGMKS-KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           R  F+     KD + W+++ISAY      ++A   +  M     +P+ +T+VG+LS C++
Sbjct: 397 RRAFETSSYFKDAITWSSMISAYGLHGRGEEAIIAYYKMLQQGFKPDMITVVGVLSACSK 456

Query: 389 AGALEMGKWLH-TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWN 446
           +G ++ G  ++ + + K  ++  V +   +VDM  + G ++ A     E  +     +W 
Sbjct: 457 SGLVDEGISIYKSLMTKYEIKPTVEICACVVDMLGRSGQLDQALEFIKEMPLDPGPSVWG 516

Query: 447 AMMAGYGMHG 456
           +++    +HG
Sbjct: 517 SLLTASVIHG 526



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 143/286 (50%), Gaps = 12/286 (4%)

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           ++L L+  C  +   +L +  HA IL NGF  +  +A  LV  Y  C E+ ++R +F+ +
Sbjct: 30  SLLHLLQLCIDLRSQKLAQQSHAQILANGFAQNAFLATRLVSAYATCGELATSRFVFESV 89

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           ++K V +WN++I+ Y + H   +A  LF  M  + + P++ T+  +  +  E   L  GK
Sbjct: 90  EAKSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATVFKVFGELEDLVSGK 149

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG-YGMH 455
            +H    + G   DV++  +L+ MY +CG+   A ++F E  +R++  +N +++G   + 
Sbjct: 150 LIHGKGIRIGFVSDVVVGNSLMSMYCRCGEFGDAVKVFDETPHRNVGSFNVVISGCAALE 209

Query: 456 GCG----EEALIFFVDMERSGVKPNGITFIGLLN-ACSHAGLVTEGKSVFDKMVHGLGLV 510
            C     ++   FF+ M+  G K +  T   LL   C   G    G+ +   +V   GL 
Sbjct: 210 NCNFTSHDDLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWDYGRELHCYVVKN-GLD 268

Query: 511 PKIE---HYG-CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
            K++   H G  ++D+  R+  +     +   M  R N+ VW A++
Sbjct: 269 LKMDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKNR-NVYVWTAMI 313


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 190/559 (33%), Positives = 306/559 (54%), Gaps = 43/559 (7%)

Query: 107 YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM 166
           Y  N ++  YS+ G +    YLFD MP RD VSW+++I GY   GL  ++++    M   
Sbjct: 76  YSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKN 135

Query: 167 D--IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYS 220
           D     + +   +++ L +    V LG+ IH  VV      K G    V + + L+DMYS
Sbjct: 136 DGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVV------KFGFMSYVFVGSPLVDMYS 189

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE------------ 268
           K G ++ A+++F+ L + +VV +  +I G +RC  + +  RLF EM E            
Sbjct: 190 KMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITG 249

Query: 269 -------------------ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
                              EN+   + T  S++  CG V  LQ GK +HAYI+R  ++ +
Sbjct: 250 FTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDN 309

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           + +A+ALVDMY KC+ I+SA  +F  M  K+V+ W A++  Y Q    ++A + F  M+ 
Sbjct: 310 IFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQK 369

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
             + P++ T+  ++S C    +LE G   H      GL   + +  ALV +Y KCG +  
Sbjct: 370 YGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIED 429

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           ++RLF+E  ++D   W A+++GY   G   E +  F  M   G+KP+ +TFIG+L+ACS 
Sbjct: 430 SHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSR 489

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           AGLV +G  +F+ M++  G+VP  +HY CM+DL  RAG ++EA   I  MP  P+ I W 
Sbjct: 490 AGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWA 549

Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR 609
            LL++ + + N  +G+ AA  ++E++P N    VL+S++YA   +W +VA +R+ M++  
Sbjct: 550 TLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKG 609

Query: 610 VKKEPGFSSVEVNGLVHKF 628
           ++KEPG S ++    VH F
Sbjct: 610 LRKEPGCSWIKYKNQVHVF 628



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 146/324 (45%), Gaps = 65/324 (20%)

Query: 6   GFLNLEQTRQCHAHIIKTHFK---FSYTNIIN---------------------PLTRYNS 41
           G + L++ +Q HA+II+T +K   F  + +++                      +  + +
Sbjct: 287 GVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTA 346

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           ++  Y +N     A+  ++ M+K G E D+FT+ +++ +CA +     G + H  A+ +G
Sbjct: 347 MLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSG 406

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
           L     VSNAL+ +Y +CGS+  +  LF+E+  +D V+W+ ++ GY + G   E + +  
Sbjct: 407 LISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFE 466

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA---TALIDM 218
            M    ++P +V  I ++S  +    V+ G  I   ++    +E   V I    T +ID+
Sbjct: 467 SMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMI----NEHGIVPIQDHYTCMIDL 522

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           +S+ G +  A+   N++  +                                  P  I+ 
Sbjct: 523 FSRAGRIEEARNFINKMPFS----------------------------------PDAISW 548

Query: 279 LSLIIECGFVGGLQLGKWLHAYIL 302
            +L+  C F G + +GKW   +++
Sbjct: 549 ATLLSSCRFYGNMDIGKWAAEFLM 572



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%)

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
            LL LC E       K LH++I K     +  L   L+  YAK G +  A ++F +  + 
Sbjct: 14  ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHP 73

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           ++  WN +++ Y   G   E    F  M R     +G+++  L++  +  GL+ +    +
Sbjct: 74  NLYSWNTILSAYSKLGRVSEMEYLFDAMPRR----DGVSWNSLISGYAGCGLIYQSVKAY 129

Query: 501 DKMVHGLG 508
           + M+   G
Sbjct: 130 NLMLKNDG 137


>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
          Length = 742

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 194/599 (32%), Positives = 315/599 (52%), Gaps = 50/599 (8%)

Query: 74  IPTILKACAQVLMTHL-------GKEIHGFAIKNGL-DGDAYVSNALIQMYSECGSLVSA 125
           + T L+A    L+ HL       G+      + + + D + +  NAL+   +    +   
Sbjct: 39  LKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDM 98

Query: 126 RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFAD 184
             LF  MP RD VS++ +I G+   G P  ++++ R + R   +RP+ + + +M+ + + 
Sbjct: 99  ERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASA 158

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
           ++D  LG ++H  V+R      LG      + + L+DMY+K G +  A+++F  +   +V
Sbjct: 159 LSDRALGHSVHCQVLR------LGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTV 212

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIE-------------------------------E 269
           V +  +I+G +RC  I +   LF  M++                               E
Sbjct: 213 VMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAE 272

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            V   + T  S++  CG +  L+ GK +HAYI R  +E ++ + +ALVDMY KCR IR A
Sbjct: 273 GVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLA 332

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             +F  M  ++++ W A+I  Y Q  C ++A   F  M++  ++P++ T+  ++S C   
Sbjct: 333 EAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANL 392

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            +LE G   H      GL   + +  ALV +Y KCG +  A+RLF E  + D   W A++
Sbjct: 393 ASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALV 452

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
            GY   G  +E +  F  M  +G+KP+G+TFIG+L+ACS AGLV +G   FD M    G+
Sbjct: 453 TGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGI 512

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
           VP  +HY CM+DL  R+G   EA E IK MP  P+   W  LL++ +L  N  +G+ AA 
Sbjct: 513 VPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAE 572

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            +LE +PQN    VL+ +++A   +W +VA +RR M++ +VKKEPG S ++    VH F
Sbjct: 573 NLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIF 631



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 129/268 (48%), Gaps = 34/268 (12%)

Query: 10  LEQTRQCHAHIIKTHFK---FSYTNIINPLTR---------------------YNSLVTS 45
           LE+ +Q HA+I +T ++   F  + +++  ++                     + +++  
Sbjct: 294 LEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVG 353

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
           Y +N     A+  ++ M+ +G + D+FT+ +++ +CA +     G + H  A+ +GL   
Sbjct: 354 YGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRY 413

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
             VSNAL+ +Y +CGS+  A  LFDEM   D VSW+ ++ GY + G  +E +++  +M  
Sbjct: 414 ITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLA 473

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA----TALIDMYSK 221
             ++P  V  I ++S  +    V+ G     C   +   +  G+       T +ID+YS+
Sbjct: 474 NGLKPDGVTFIGVLSACSRAGLVEKG-----CDYFDSMQKDHGIVPIDDHYTCMIDLYSR 528

Query: 222 CGNLAYAKQLFNRLNQN-SVVSWTVMIS 248
            G    A++   ++  +     W  ++S
Sbjct: 529 SGRFKEAEEFIKQMPHSPDAFGWATLLS 556


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  351 bits (901), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 194/599 (32%), Positives = 315/599 (52%), Gaps = 50/599 (8%)

Query: 74  IPTILKACAQVLMTHL-------GKEIHGFAIKNGL-DGDAYVSNALIQMYSECGSLVSA 125
           + T L+A    L+ HL       G+      + + + D + +  NAL+   +    +   
Sbjct: 39  LKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDM 98

Query: 126 RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFAD 184
             LF  MP RD VS++ +I G+   G P  ++++ R + R   +RP+ + + +M+ + + 
Sbjct: 99  ERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASA 158

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
           ++D  LG ++H  V+R      LG      + + L+DMY+K G +  A+++F  +   +V
Sbjct: 159 LSDRALGHSVHCQVLR------LGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTV 212

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIE-------------------------------E 269
           V +  +I+G +RC  I +   LF  M++                               E
Sbjct: 213 VMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAE 272

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            V   + T  S++  CG +  L+ GK +HAYI R  +E ++ + +ALVDMY KCR IR A
Sbjct: 273 GVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLA 332

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             +F  M  ++++ W A+I  Y Q  C ++A   F  M++  ++P++ T+  ++S C   
Sbjct: 333 EAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANL 392

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            +LE G   H      GL   + +  ALV +Y KCG +  A+RLF E  + D   W A++
Sbjct: 393 ASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALV 452

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
            GY   G  +E +  F  M  +G+KP+G+TFIG+L+ACS AGLV +G   FD M    G+
Sbjct: 453 TGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGI 512

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
           VP  +HY CM+DL  R+G   EA E IK MP  P+   W  LL++ +L  N  +G+ AA 
Sbjct: 513 VPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAE 572

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            +LE +PQN    VL+ +++A   +W +VA +RR M++ +VKKEPG S ++    VH F
Sbjct: 573 NLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIF 631



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 129/268 (48%), Gaps = 34/268 (12%)

Query: 10  LEQTRQCHAHIIKTHFK---FSYTNIINPLTR---------------------YNSLVTS 45
           LE+ +Q HA+I +T ++   F  + +++  ++                     + +++  
Sbjct: 294 LEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNIISWTAMIVG 353

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
           Y +N     A+  ++ M+ +G + D+FT+ +++ +CA +     G + H  A+ +GL   
Sbjct: 354 YGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRY 413

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
             VSNAL+ +Y +CGS+  A  LFDEM   D VSW+ ++ GY + G  +E +++  +M  
Sbjct: 414 ITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLA 473

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA----TALIDMYSK 221
             ++P  V  I ++S  +    V+ G     C   +   +  G+       T +ID+YS+
Sbjct: 474 NGLKPDGVTFIGVLSACSRAGLVEKG-----CDYFDSMQKDHGIVPIDDHYTCMIDLYSR 528

Query: 222 CGNLAYAKQLFNRLNQN-SVVSWTVMIS 248
            G    A++   ++  +     W  ++S
Sbjct: 529 SGRFKEAEEFIKQMPHSPDAFGWATLLS 556


>gi|413932453|gb|AFW67004.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 913

 Score =  351 bits (900), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 197/587 (33%), Positives = 319/587 (54%), Gaps = 9/587 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + + ++   +N +P +A  ++A M ++G   ++F     L ACA      LG+++H  A+
Sbjct: 104 WTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNAALAACAAAGALGLGEQVHSLAV 163

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G   DA++ + LI++YS CGSL +A  +F  M   DVV +++++    R G    A++
Sbjct: 164 RAGFAADAWIGSCLIELYSRCGSLRAAEEVFRRMEAPDVVGYTSLVSALCRNGELARAVD 223

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V+ +M    ++P+E  M SM++         +G+ IH  +++    +   V  +TALID 
Sbjct: 224 VLCQMTRQGLQPNEHTMTSMLA----ECPRGIGEQIHGYMLKVMGSQS--VYASTALIDF 277

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YS+ G+   AK +F  L   +VVSW  M+   IR   +++ +R+F+EMI E V P+E   
Sbjct: 278 YSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDGRLDDALRVFSEMISEGVQPNEFAF 337

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
              +  CG V    LG+ +H   ++      + ++NAL+ MYG+   +     +   +++
Sbjct: 338 SIALSACGSVC---LGRQIHCSAIKRDLMTDIRVSNALLSMYGRSGFVSELEAVLGKIEN 394

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D++ W A ISA  Q    +KA  L + M      PN+      LS C +   L  G+ L
Sbjct: 395 PDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQGRQL 454

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H    K G +  V    AL++MY+KCG +  A   F      D+  WN+++ G   HG  
Sbjct: 455 HCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQHGDA 514

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
             AL  F +M  S  +P+  TF+ +L  C+HAGLV EG++ F +M    GL P   HY C
Sbjct: 515 NLALETFSEMCSSDWRPDDSTFLSVLVGCNHAGLVKEGETFFRQMTDRYGLTPTPSHYAC 574

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           M+D+LGR G   EA  MI++MP  P++++W  LLA+ KLH+N  +G++AA +++E+  ++
Sbjct: 575 MIDMLGRNGRFAEALRMIENMPFEPDVLIWKTLLASCKLHRNLDIGKLAADKLMELSERD 634

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLV 625
               VLMSN+YA+   W D   VRR M EI VKK+ G+S +EV   V
Sbjct: 635 SASYVLMSNLYAMHEEWRDAERVRRRMDEIGVKKDAGWSWIEVKNEV 681



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 198/384 (51%), Gaps = 17/384 (4%)

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV 179
           G L  A  LFD MP ++VV+W+T I G  R G PE A  +  +M    + P++ A  + +
Sbjct: 84  GRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPNDFACNAAL 143

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRL 235
           +  A    + LG+ +H+  VR       G A    I + LI++YS+CG+L  A+++F R+
Sbjct: 144 AACAAAGALGLGEQVHSLAVR------AGFAADAWIGSCLIELYSRCGSLRAAEEVFRRM 197

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
               VV +T ++S   R  E+   V +  +M  + + P+E T+ S++ EC       +G+
Sbjct: 198 EAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAEC----PRGIGE 253

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
            +H Y+L+     S+  + AL+D Y +  +  +A+T+F+ ++SK+V+ W +++    +  
Sbjct: 254 QIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRDG 313

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
            +D A  +F  M    V+PNE      LS C   G++ +G+ +H    K+ L  D+ +  
Sbjct: 314 RLDDALRVFSEMISEGVQPNEFAFSIALSAC---GSVCLGRQIHCSAIKRDLMTDIRVSN 370

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           AL+ MY + G V+    +  +    D+  W A ++    +G  E+A+   + M   G  P
Sbjct: 371 ALLSMYGRSGFVSELEAVLGKIENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTP 430

Query: 476 NGITFIGLLNACSHAGLVTEGKSV 499
           N   F   L++C+   L+ +G+ +
Sbjct: 431 NDYAFSSGLSSCADLALLHQGRQL 454



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 189/382 (49%), Gaps = 17/382 (4%)

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +D   K G L  A  LF+R+ + +VV+WT  ISG  R         +FA+M+E  V P++
Sbjct: 77  LDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADMLESGVAPND 136

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
               + +  C   G L LG+ +H+  +R GF     + + L+++Y +C  +R+A  +F  
Sbjct: 137 FACNAALAACAAAGALGLGEQVHSLAVRAGFAADAWIGSCLIELYSRCGSLRAAEEVFRR 196

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M++ DV+ + +++SA  +   + +A ++   M    ++PNE TM  +L+ C       +G
Sbjct: 197 MEAPDVVGYTSLVSALCRNGELARAVDVLCQMTRQGLQPNEHTMTSMLAECPRG----IG 252

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H Y+ K      V   TAL+D Y++ GD   A  +F     +++  W +MM      
Sbjct: 253 EQIHGYMLKVMGSQSVYASTALIDFYSRYGDFGTAKTVFENLESKNVVSWCSMMQLCIRD 312

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  ++AL  F +M   GV+PN   F   L+AC   G V  G+ +    +    L+  I  
Sbjct: 313 GRLDDALRVFSEMISEGVQPNEFAFSIALSAC---GSVCLGRQIHCSAIK-RDLMTDIRV 368

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
              ++ + GR+G + E   ++  +   P+++ W A ++A+   +N    E A   +L++ 
Sbjct: 369 SNALLSMYGRSGFVSELEAVLGKIE-NPDLVSWTAAISAN--FQN-GFSEKAVALLLQMH 424

Query: 576 -----PQNYGYNVLMSNIYAVA 592
                P +Y ++  +S+   +A
Sbjct: 425 SEGFTPNDYAFSSGLSSCADLA 446



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 1/149 (0%)

Query: 32  IINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           I NP L  + + +++  +N     A+ +   M   G   +++   + L +CA + + H G
Sbjct: 392 IENPDLVSWTAAISANFQNGFSEKAVALLLQMHSEGFTPNDYAFSSGLSSCADLALLHQG 451

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           +++H  A+K G D      NALI MYS+CG + SAR  FD M   DV+SW+++I G  + 
Sbjct: 452 RQLHCLALKLGCDFKVCTGNALINMYSKCGRIGSARLAFDVMDTHDVMSWNSLIHGLAQH 511

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMV 179
           G    ALE   EM   D RP +   +S++
Sbjct: 512 GDANLALETFSEMCSSDWRPDDSTFLSVL 540



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 2/145 (1%)

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           DV+L    +D   K G +  A  LF     +++  W   ++G   +G  E A   F DM 
Sbjct: 69  DVVLDCKRLDGLMKSGRLGDALDLFDRMPRKNVVAWTTAISGCTRNGRPEAAATMFADML 128

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
            SGV PN       L AC+ AG +  G+ V    V   G         C+++L  R G L
Sbjct: 129 ESGVAPNDFACNAALAACAAAGALGLGEQVHSLAVRA-GFAADAWIGSCLIELYSRCGSL 187

Query: 530 DEAHEMIKSMPLRPNMIVWGALLAA 554
             A E+ + M   P+++ + +L++A
Sbjct: 188 RAAEEVFRRMEA-PDVVGYTSLVSA 211


>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Glycine max]
          Length = 628

 Score =  351 bits (900), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 199/577 (34%), Positives = 316/577 (54%), Gaps = 15/577 (2%)

Query: 67  SEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSAR 126
           S  D  T    L++CA       GKE+H   +KN   G      +LI MYS+C SL+   
Sbjct: 25  STYDLGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKC-SLIDHS 83

Query: 127 ---YLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFA 183
              + F    N++V +++ +I G+    LP+ AL +  +MR + I P +     ++    
Sbjct: 84  LRVFNFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACG 143

Query: 184 DVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSW 243
           D  D  +   IH  + +     +L V + +AL++ Y K   +  A ++F  L    VV W
Sbjct: 144 DDDDGFVVTKIHGLMFK--VGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLW 201

Query: 244 TVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
             M++G+ +     E + +F  M    V P   T+  ++     +G    G+ +H ++ +
Sbjct: 202 NAMVNGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTK 261

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
            G+E  + ++NAL+DMYGKC+ +  A ++F+ M   D+  WN+++S + +         L
Sbjct: 262 MGYESGVVVSNALIDMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRL 321

Query: 364 FIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV--------DVILK 414
           F  M   S+V+P+ VT+  +L  CT   AL  G+ +H Y+   GL          DV+L 
Sbjct: 322 FDRMMGSSRVQPDLVTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLN 381

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
            AL+DMYAKCG++  A  +F     +D+  WN M+ GYGMHG G EAL  F  M ++ + 
Sbjct: 382 NALMDMYAKCGNMRDARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMV 441

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
           PN I+F+GLL+ACSHAG+V EG     +M    G+ P IEHY C++D+L RAG L EA++
Sbjct: 442 PNEISFVGLLSACSHAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYD 501

Query: 535 MIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANR 594
           ++ +MP + + + W +LLAA +LH +  + E+AA++++E+EP + G  VLMSN+Y V  R
Sbjct: 502 LVLTMPFKADPVGWRSLLAACRLHNDTDLAEVAASKVIELEPDHCGNYVLMSNVYGVVGR 561

Query: 595 WNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           + +V   R  MK+  VKK PG S +E+   VH FI G
Sbjct: 562 YEEVLEWRYTMKQQNVKKRPGCSWIELVNGVHVFITG 598



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 145/484 (29%), Positives = 246/484 (50%), Gaps = 39/484 (8%)

Query: 9   NLEQTRQCHAHIIKTHF---KFSYTNIINPLTR-----------------------YNSL 42
           NL + ++ H H++K  F     + T++IN  ++                       YN+L
Sbjct: 44  NLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFPTHHNKNVFAYNAL 103

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           +  ++ N  P  AL +Y  MR  G   D FT P +++AC       +  +IHG   K GL
Sbjct: 104 IAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKIHGLMFKVGL 163

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
           + D +V +AL+  Y +   +  A  +F+E+P RDVV W+ M+ G+ + G  EEAL V R 
Sbjct: 164 ELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRFEEALGVFRR 223

Query: 163 MRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC 222
           M    + P    +  ++S+F+ + D D G+A+H  V +   +   GV ++ ALIDMY KC
Sbjct: 224 MGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYES--GVVVSNALIDMYGKC 281

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI-EENVFPSEITILSL 281
             +  A  +F  +++  + SW  ++S + RC +    +RLF  M+    V P  +T+ ++
Sbjct: 282 KCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPDLVTVTTV 341

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEF--------SLAMANALVDMYGKCREIRSARTLF 333
           +  C  +  L  G+ +H Y++ NG            + + NAL+DMY KC  +R AR +F
Sbjct: 342 LPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMRDARMVF 401

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
             M+ KDV  WN +I+ Y       +A ++F  M  +++ PNE++ VGLLS C+ AG ++
Sbjct: 402 VNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSACSHAGMVK 461

Query: 394 MGKWLHTYIE-KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAG 451
            G    + +E K G+   +   T ++DM  + G +  AY L     ++ D   W +++A 
Sbjct: 462 EGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPVGWRSLLAA 521

Query: 452 YGMH 455
             +H
Sbjct: 522 CRLH 525


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  351 bits (900), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 198/592 (33%), Positives = 324/592 (54%), Gaps = 7/592 (1%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           N++++ Y      S    +++ MR +G   D  T+ +++  CA       G  IH   ++
Sbjct: 215 NAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLR 274

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
           + LD    V NAL+ MYS  G L  A +LF  M  RD++SW+TMI  Y +     +AL+ 
Sbjct: 275 SSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKT 334

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
           + ++   +  P+ +   S +   +    +  GK +HA V++      L   +  +LI MY
Sbjct: 335 LGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNL--LVGNSLITMY 392

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            KC ++  A+++F  +  + VVS+ V+I GY    +  + +++F+ +    + P+ IT++
Sbjct: 393 GKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMI 452

Query: 280 SLIIECGFVGGLQL---GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           +  I   F     L   G+ LHAYI+R GF     +AN+L+ MY KC  + S+  +F+ +
Sbjct: 453 N--IHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSI 510

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
            +K+++ WNA+I+A AQ    ++A +LFI M+ +  + + V +   LS C    +LE G 
Sbjct: 511 TNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGM 570

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            LH    K GL+ D  +  A +DMY KCG +N   ++  +   R    WN +++GY  +G
Sbjct: 571 QLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYG 630

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             +EA   F  M   G KP+ +TF+ LL+ACSHAGLV +G   ++ M    G+ P I+H 
Sbjct: 631 YFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHC 690

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            C+VDLLGR G   EA   I+ MP+ PN ++W +LL++S+ HKN  +G  AA ++LE++P
Sbjct: 691 VCIVDLLGRLGRFAEAERFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKAAKKLLELDP 750

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            +    VL+SN+YA   RW DV  +R  MK I + K P  S +++   V  F
Sbjct: 751 FDDSAYVLLSNLYATNARWVDVDKLRSHMKTININKRPACSWLKLKNEVSTF 802



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 258/521 (49%), Gaps = 13/521 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+ +   N      L  Y  MR+ G   +     T++  C  +     G ++    I
Sbjct: 113 WTALMVALSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVI 172

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +GL     V+N+LI M+   G +  A  LFD M   D +S + MI  Y   G+  +   
Sbjct: 173 VSGLQNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFL 232

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V  +MR   +RP    + S++S+ A       G  IH+  +R+  D    V +  AL++M
Sbjct: 233 VFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSS--VTVINALVNM 290

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YS  G L+ A+ LF  +++  ++SW  MIS Y++     + ++   ++   N  P+ +T 
Sbjct: 291 YSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTF 350

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +  C   G L  GK +HA +L+   + +L + N+L+ MYGKC  +  A  +F  M +
Sbjct: 351 SSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPT 410

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE-MGKW 397
            DV+ +N +I  YA      KA ++F  ++ + ++PN +TM+ +    T +  L   G+ 
Sbjct: 411 HDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRP 470

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH YI + G   D  +  +L+ MYAKCG++  +  +F+    ++I  WNA++A     G 
Sbjct: 471 LHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGH 530

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           GEEAL  F+DM+ +G K + +     L++C+    + EG       +HGLG+   ++   
Sbjct: 531 GEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEG-----MQLHGLGMKSGLDSDS 585

Query: 518 CMV----DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            +V    D+ G+ G ++E  +M+    +RP    W  L++ 
Sbjct: 586 YVVNAAMDMYGKCGKMNEMLQMVPDQAIRPQQ-CWNTLISG 625



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/550 (26%), Positives = 263/550 (47%), Gaps = 14/550 (2%)

Query: 35  PLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH---LGK 91
           P T Y + V+  ++  +  +A  +   MR+ G  +  F + +++ AC +         G 
Sbjct: 6   PSTWYTA-VSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGIACGA 64

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            IH    + GL G+ Y+  AL+ +Y   G +  AR LF EMP R+VVSW+ ++      G
Sbjct: 65  AIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNG 124

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
             EE L   R+MR   +  +  A  ++VSL   + +   G  + + V+ +    +  V++
Sbjct: 125 YLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQ--VSV 182

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
           A +LI M+   G +  A++LF+R+ ++  +S   MIS Y      ++   +F++M    +
Sbjct: 183 ANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGL 242

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P   T+ SL+  C        G  +H+  LR+  + S+ + NALV+MY    ++  A  
Sbjct: 243 RPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEF 302

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           LF  M  +D++ WN +IS+Y Q      A +    +  +   PN +T    L  C+  GA
Sbjct: 303 LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGA 362

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L  GK +H  + +  L+ ++++  +L+ MY KC  +  A ++F      D+  +N ++ G
Sbjct: 363 LIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGG 422

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA-CSHAGLVTEGKSVFDKMVHGLGLV 510
           Y +   G +A+  F  +  +G+KPN IT I +  +  S   L   G+ +   ++   G +
Sbjct: 423 YAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIR-TGFL 481

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
                   ++ +  + G L+ +  +  S+    N++ W A++AA     N  +G      
Sbjct: 482 SDEYVANSLITMYAKCGNLESSTNIFNSIT-NKNIVSWNAIIAA-----NAQLGHGEEAL 535

Query: 571 ILEIEPQNYG 580
            L I+ Q+ G
Sbjct: 536 KLFIDMQHAG 545



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 204/425 (48%), Gaps = 9/425 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N++++SY++N   + AL     +       ++ T  + L AC+       GK +H 
Sbjct: 312 LISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHA 371

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             ++  L  +  V N+LI MY +C S+  A  +F  MP  DVVS++ +I GY       +
Sbjct: 372 IVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTK 431

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADV-DLGKAIHACVVRN--CKDEKLGVAIA 212
           A++V   +R   I+P+ + MI++   F    D+ + G+ +HA ++R     DE     +A
Sbjct: 432 AMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEY----VA 487

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            +LI MY+KCGNL  +  +FN +   ++VSW  +I+   +     E ++LF +M      
Sbjct: 488 NSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNK 547

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
              + +   +  C  +  L+ G  LH   +++G +    + NA +DMYGKC ++     +
Sbjct: 548 LDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQM 607

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
                 +    WN +IS YA+     +A E F  M     +P+ VT V LLS C+ AG +
Sbjct: 608 VPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAGLV 667

Query: 393 EMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMA 450
           + G  + ++     G+   +     +VD+  + G    A R   E  +  +  +W ++++
Sbjct: 668 DKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDLIWRSLLS 727

Query: 451 GYGMH 455
               H
Sbjct: 728 SSRTH 732



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 243/512 (47%), Gaps = 25/512 (4%)

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA---DV 188
           MP+R   +W T + G  R G    A E++R MR   +  S  A+ S+V+          +
Sbjct: 1   MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 189 DLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
             G AIHA   R        V I TAL+ +Y   G ++ A++LF  + + +VVSWT ++ 
Sbjct: 61  ACGAAIHALTHR--AGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMV 118

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
                  + E +R + +M  E V  +     +++  CG +     G  + ++++ +G + 
Sbjct: 119 ALSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQN 178

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
            +++AN+L+ M+G    ++ A  LFD M+  D +  NA+IS Y+      K F +F  M+
Sbjct: 179 QVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMR 238

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
              +RP+  T+  L+S+C  A     G  +H+   +  L+  V +  ALV+MY+  G ++
Sbjct: 239 HHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLS 298

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A  LF     RD+  WN M++ Y  +    +AL     +  +   PN +TF   L ACS
Sbjct: 299 DAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACS 358

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
             G + +G     KMVH + L   ++        ++ + G+   +++A ++ +SMP   +
Sbjct: 359 SPGALIDG-----KMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTH-D 412

Query: 545 MIVWGALLAASKLHKN--PSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVR 602
           ++ +  L+    + ++   +M   +  +   I+P NY   + M NI+      ND+    
Sbjct: 413 VVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKP-NY---ITMINIHGSFTSSNDLHNYG 468

Query: 603 RVMKEIRVKKEPGFSSVE--VNGLVHKFIRGG 632
           R +    ++   GF S E   N L+  + + G
Sbjct: 469 RPLHAYIIRT--GFLSDEYVANSLITMYAKCG 498



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 130/292 (44%), Gaps = 28/292 (9%)

Query: 14  RQCHAHIIKTHFKF-------------------SYTNIINPLTR-----YNSLVTSYIKN 49
           R  HA+II+T F                     S TNI N +T      +N+++ +  + 
Sbjct: 469 RPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQL 528

Query: 50  NKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVS 109
                AL ++  M+  G+++D   +   L +CA +     G ++HG  +K+GLD D+YV 
Sbjct: 529 GHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVV 588

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
           NA + MY +CG +     +  +   R    W+T+I GY + G  +EA E  ++M  M  +
Sbjct: 589 NAAMDMYGKCGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRK 648

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           P  V  ++++S  +    VD G   +  +  +      G+     ++D+  + G  A A+
Sbjct: 649 PDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSP-GIKHCVCIVDLLGRLGRFAEAE 707

Query: 230 QLFNRLN--QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
           +    +    N ++ W  ++S       +  G +   +++E + F     +L
Sbjct: 708 RFIEEMPVLPNDLI-WRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVL 758


>gi|297834340|ref|XP_002885052.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330892|gb|EFH61311.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 652

 Score =  351 bits (900), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 194/564 (34%), Positives = 317/564 (56%), Gaps = 18/564 (3%)

Query: 78  LKACAQVLMTHLGKEIHGFAIKNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           L+ CAQ   +  G++IHGF ++ G LD       +L+ MY++CG +  A  +F     RD
Sbjct: 66  LQRCAQRKDSVSGQQIHGFMVRKGFLDDSPRAVTSLVNMYAKCGLMRRAVLVFGG-SERD 124

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           V  ++ +I G+   G P +A+++ REMR   I P +    S++   +D  +V   K +HA
Sbjct: 125 VFGYNALISGFVVNGSPLDAMDMYREMRAKGILPDKYTFPSLLK-GSDAMEVSDVKKVHA 183

Query: 197 CVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRL-NQNSVVSWTVMISGYI 251
                    KLG      + +AL+  YSK  ++  A+++F+ L +++  V W  +++GY 
Sbjct: 184 LAF------KLGFVSDCYVGSALVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYS 237

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
                 + + +F++M EE V  S  TI S++      G L  G+ +H   ++ GF+  + 
Sbjct: 238 HIFRFEDALIVFSKMREEGVAMSRHTITSVLSSFTVSGDLDNGRSIHGLAVKMGFDSGIV 297

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           ++NAL+D+YGK + +  A ++F+ M  +D+  WN+V+  +      D    LF  M  S 
Sbjct: 298 VSNALIDLYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFETMLCSG 357

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL----EVDVILKTALVDMYAKCGDV 427
           +RP+ VT+  +L  C    +L+ G+ +H Y+   GL      +  +  +L+DMY KCGD+
Sbjct: 358 IRPDIVTLTTVLPTCGRLASLKQGREIHGYMIASGLLNRKSSNGFIHNSLMDMYVKCGDL 417

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             A  +F     +D   WN M+ GYG+  CGE AL  F  M R+GVKP+ ITF+GLL AC
Sbjct: 418 RDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQAC 477

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           SH+G V EG++   +M     ++P  +HY C++D+LGRA  L+EA+++  SMP+  N +V
Sbjct: 478 SHSGFVNEGRNFLAQMETLYNILPTSDHYACVIDMLGRADKLEEAYDLAISMPICDNPVV 537

Query: 548 WGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
           W ++L++ +LH N  +  +A  ++ E+EP++ G  VLMSN+Y  A ++ +V  VR  MKE
Sbjct: 538 WRSILSSCRLHGNKDLAVVAGKRLYELEPEHCGVYVLMSNVYVEAKKYEEVLDVRDTMKE 597

Query: 608 IRVKKEPGFSSVEVNGLVHKFIRG 631
             VKK PG S + +   VH F  G
Sbjct: 598 QNVKKTPGCSWIGLQNGVHTFFTG 621



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 236/439 (53%), Gaps = 24/439 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+L++ ++ N  P  A+++Y  MR  G   D +T P++LK    + ++ + K++H  A 
Sbjct: 128 YNALISGFVVNGSPLDAMDMYREMRAKGILPDKYTFPSLLKGSDAMEVSDV-KKVHALAF 186

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR-DVVSWSTMIRGYHRGGLPEEAL 157
           K G   D YV +AL+  YS+  S+  A+ +FDE+P+R D V W+ ++ GY      E+AL
Sbjct: 187 KLGFVSDCYVGSALVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSHIFRFEDAL 246

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            V  +MR   +  S   + S++S F    D+D G++IH   V+   D   G+ ++ ALID
Sbjct: 247 IVFSKMREEGVAMSRHTITSVLSSFTVSGDLDNGRSIHGLAVKMGFDS--GIVVSNALID 304

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           +Y K   L  A  +F  +++  + +W  ++  +  C + +  + LF  M+   + P  +T
Sbjct: 305 LYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFETMLCSGIRPDIVT 364

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGF----EFSLAMANALVDMYGKCREIRSARTLF 333
           + +++  CG +  L+ G+ +H Y++ +G       +  + N+L+DMY KC ++R AR +F
Sbjct: 365 LTTVLPTCGRLASLKQGREIHGYMIASGLLNRKSSNGFIHNSLMDMYVKCGDLRDARMVF 424

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           D M+ KD   WN +I+ Y    C + A ++F  M  + V+P+E+T VGLL  C+ +G + 
Sbjct: 425 DSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFVN 484

Query: 394 MGKWLHTYIEKQGLEVDVILKTA-----LVDMYAKCGDVNGAYRLFSEAIYRDIC----M 444
            G+     +E     +  IL T+     ++DM  +   +  AY L   AI   IC    +
Sbjct: 485 EGRNFLAQMET----LYNILPTSDHYACVIDMLGRADKLEEAYDL---AISMPICDNPVV 537

Query: 445 WNAMMAGYGMHGCGEEALI 463
           W ++++   +HG  + A++
Sbjct: 538 WRSILSSCRLHGNKDLAVV 556



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 4/161 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NS++  +         L ++  M  +G   D  T+ T+L  C ++     G+EIHG
Sbjct: 327 LFTWNSVLCVHDYCGDHDGTLALFETMLCSGIRPDIVTLTTVLPTCGRLASLKQGREIHG 386

Query: 96  FAIKNGL----DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           + I +GL      + ++ N+L+ MY +CG L  AR +FD M  +D  SW+ MI GY    
Sbjct: 387 YMIASGLLNRKSSNGFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQS 446

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
             E AL++   M    ++P E+  + ++   +    V+ G+
Sbjct: 447 CGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFVNEGR 487


>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Brachypodium distachyon]
          Length = 734

 Score =  351 bits (900), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 186/542 (34%), Positives = 306/542 (56%), Gaps = 6/542 (1%)

Query: 93  IHGFAIK-NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           +H  A K      + +VS AL+ MY + G +  A+ +FDEMP+R+ VSW+ M+ GY    
Sbjct: 139 VHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARK 198

Query: 152 LPEEALEVMREMRF-MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG-V 209
             +EA E+ R+M     +  +E    +++S  +    + +G  +H  VV   KD  +G V
Sbjct: 199 CSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVV---KDGMVGFV 255

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
           ++  +L+ MY+K G +  A  +F    + + ++W+ MI+GY +       VR+F++M   
Sbjct: 256 SVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAA 315

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
              P+E T++ ++  C  VG L  GK  H  +++ GFE  + + +ALVDMY KC  I  A
Sbjct: 316 GFPPTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDA 375

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           +  F+     D+++W A+++ + Q    ++A  L+  M    V PN +T+  LL  C   
Sbjct: 376 KECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGL 435

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            ALE GK LHT I K G  +   + +AL  MY+KCG++     +F    +RD+  WN+++
Sbjct: 436 AALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSII 495

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           +G+  +G G +A+  F +M+  G  P+ +TFI +L ACSH GLV  G + F  M+   GL
Sbjct: 496 SGFSQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGL 555

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            P+++HY CMVD+L RAG+L EA + I+S+ +     +W  +L A +  ++  +G  A  
Sbjct: 556 TPRLDHYACMVDILSRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGE 615

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +++++   +    +L+SNIYA   +WNDV  VR +MK + V K+PG S VE+N  VH F+
Sbjct: 616 KLMDLGTGDSAAYILLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCSWVELNSRVHVFV 675

Query: 630 RG 631
            G
Sbjct: 676 VG 677



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 246/473 (52%), Gaps = 16/473 (3%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLV--SARYLFDEMP--NRDVVSWSTMIR 145
           G+ +H +A+K+G    A VSN+LI  YS    L   +A  +F ++P   RDV SW++++ 
Sbjct: 31  GEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLN 90

Query: 146 --GYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
              +HR   P  AL   R M     I PS  +  +  +  A       G  +HA   +  
Sbjct: 91  PLSHHR---PLAALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACK-L 146

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
                 V ++TAL++MY K G +  A+ +F+ +   + VSW  M++GY       E   L
Sbjct: 147 PSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFEL 206

Query: 263 FAEMIEE-NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           F +M+ E  +  +E    +++       GL +G  +H  ++++G    +++ N+LV MY 
Sbjct: 207 FRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYA 266

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           K   + +A  +F+  K ++ + W+A+I+ Y+Q    + A  +F  M  +   P E T+VG
Sbjct: 267 KAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVG 326

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           +L+ C++ G L  GK  H  + K G EV V +K+ALVDMYAKCG +  A   F++    D
Sbjct: 327 VLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELD 386

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           I +W AM+ G+  +G  E+AL+ +  M++ GV PN +T   LL AC+    +  GK +  
Sbjct: 387 IVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHT 446

Query: 502 KMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           +++  G GL   +     +  +  + G L++   + + MP R ++I W ++++
Sbjct: 447 QILKFGFGLGASVG--SALSTMYSKCGNLEDGMVVFRRMPHR-DVIAWNSIIS 496


>gi|334184142|ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g04860
 gi|330250783|gb|AEC05877.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 692

 Score =  351 bits (900), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 193/570 (33%), Positives = 316/570 (55%), Gaps = 9/570 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+  Y +N     A  ++  M + G      T+  +L  C Q      G+ +HG A 
Sbjct: 119 WNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAA 178

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+GL+ D+ V NALI  YS+C  L SA  LF EM ++  VSW+TMI  Y + GL EEA+ 
Sbjct: 179 KSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAIT 238

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V + M   ++  S V +I+++S  A V+   L   +  C + N       +++ T+L+  
Sbjct: 239 VFKNMFEKNVEISPVTIINLLS--AHVSHEPLHCLVVKCGMVN------DISVVTSLVCA 290

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YS+CG L  A++L+    Q+S+V  T ++S Y    +++  V  F++  +  +    + +
Sbjct: 291 YSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVAL 350

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           + ++  C     + +G  LH Y +++G      + N L+ MY K  ++ +   LF+ ++ 
Sbjct: 351 VGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE 410

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMGKW 397
             ++ WN+VIS   Q+     AFE+F  M ++  + P+ +T+  LL+ C++   L +GK 
Sbjct: 411 TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE 470

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH Y  +   E +  + TAL+DMYAKCG+   A  +F          WN+M++GY + G 
Sbjct: 471 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 530

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
              AL  +++M   G+KP+ ITF+G+L+AC+H G V EGK  F  M+   G+ P ++HY 
Sbjct: 531 QHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYA 590

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
            MV LLGRA L  EA  +I  M ++P+  VWGALL+A  +H+   +GE  A ++  ++ +
Sbjct: 591 LMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYK 650

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
           N G  VLMSN+YA    W+DV  VR +MK+
Sbjct: 651 NGGLYVLMSNLYATEAMWDDVVRVRNMMKD 680



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 141/529 (26%), Positives = 249/529 (47%), Gaps = 21/529 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH--LGKEI 93
           L+ ++SL+ S I     SS + I+  + ++    ++FT+   L+A      +     +++
Sbjct: 13  LSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQV 72

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
                K+GLD   YV  +L+ +Y + G + SA+ LFDEMP RD V W+ +I GY R G  
Sbjct: 73  QTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYE 132

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            +A ++   M      PS   +++++        V  G+++H    ++    +L   +  
Sbjct: 133 CDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKS--GLELDSQVKN 190

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALI  YSKC  L  A+ LF  +   S VSW  MI  Y +     E + +F  M E+NV  
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI 250

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           S +TI++L+            + LH  +++ G    +++  +LV  Y +C  + SA  L+
Sbjct: 251 SPVTIINLL------SAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLY 304

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
              K   ++   +++S YA+   +D A   F   +   ++ + V +VG+L  C ++  ++
Sbjct: 305 ASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHID 364

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           +G  LH Y  K GL    ++   L+ MY+K  DV     LF +     +  WN++++G  
Sbjct: 365 IGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCV 424

Query: 454 MHGCGEEAL-IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             G    A  +F   M   G+ P+ IT   LL  CS    +  GK      +HG  L   
Sbjct: 425 QSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE-----LHGYTLRNN 479

Query: 513 I--EHYGC--MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
              E++ C  ++D+  + G   +A  + KS+   P    W ++++   L
Sbjct: 480 FENENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTATWNSMISGYSL 527



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 181/371 (48%), Gaps = 18/371 (4%)

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG--- 191
           RD+  + ++++    G +    + + R++    + P+   M    S+F            
Sbjct: 11  RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTM----SIFLQATTTSFNSFK 66

Query: 192 ---KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
              + +   + ++  D    V + T+L+++Y K G +  A+ LF+ + +   V W  +I 
Sbjct: 67  LQVEQVQTHLTKSGLDRF--VYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALIC 124

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
           GY R     +  +LF  M+++   PS  T+++L+  CG  G +  G+ +H    ++G E 
Sbjct: 125 GYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLEL 184

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
              + NAL+  Y KC E+ SA  LF  MK K  + WN +I AY+Q+   ++A  +F +M 
Sbjct: 185 DSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMF 244

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
              V  + VT++ LLS      A    + LH  + K G+  D+ + T+LV  Y++CG + 
Sbjct: 245 EKNVEISPVTIINLLS------AHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLV 298

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A RL++ A    I    ++++ Y   G  + A+++F    +  +K + +  +G+L+ C 
Sbjct: 299 SAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCK 358

Query: 489 HAGLVTEGKSV 499
            +  +  G S+
Sbjct: 359 KSSHIDIGMSL 369



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 89/160 (55%), Gaps = 1/160 (0%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTHLGKE 92
            PL  +NS+++  +++ + S+A  ++  M   G  + D  TI ++L  C+Q+   +LGKE
Sbjct: 411 TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE 470

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HG+ ++N  + + +V  ALI MY++CG+ V A  +F  +      +W++MI GY   GL
Sbjct: 471 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 530

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
              AL    EMR   ++P E+  + ++S       VD GK
Sbjct: 531 QHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGK 570


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  350 bits (899), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 192/556 (34%), Positives = 317/556 (57%), Gaps = 7/556 (1%)

Query: 77  ILKACAQVLMTHLGKEIHG-FAIKNGLDGDAYVS--NALIQMYSECGSLVSARYLFDEMP 133
           +LK  A       G+ IH    I N    D+ V+  N+LI +Y +C  +  AR LFD MP
Sbjct: 25  LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMP 84

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGK 192
            R+VVSWS ++ GY + G P E  E+ ++M   D I P+E  + + +S       V+ GK
Sbjct: 85  RRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVE-GK 143

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
             H   +++    +    +  ALI +YSKC ++  A Q+   +  N +  + ++++G ++
Sbjct: 144 QCHGYALKS--GLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLLQ 201

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
              + E V +   +I E +  +  T +++   C  +  + LGK +HA +L++  +  + +
Sbjct: 202 HTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVYI 261

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
            ++++DMYGKC  + S RT FD ++S++V+ W ++I+AY Q    ++A  LF  M++  +
Sbjct: 262 GSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDCI 321

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR 432
            PNE TM  L +      AL +G  LH   EK GL+ +V++  AL+ MY K GD+  A  
Sbjct: 322 PPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILAAQS 381

Query: 433 LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL 492
           +FS     +I  WNA++ G+  HG G+EAL  F DM  +G +PN +TFIG++ AC+H  L
Sbjct: 382 VFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAHLKL 441

Query: 493 VTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           V EG   F+ ++    +VP +EHY C+V LL R+G LDEA   ++S  +  +++ W  LL
Sbjct: 442 VDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWRTLL 501

Query: 553 AASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKK 612
            A  +HK+   G   A  +L++EP++ G  +L+SN++A   RW+ V  +R++M+E  VKK
Sbjct: 502 NACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERNVKK 561

Query: 613 EPGFSSVEVNGLVHKF 628
           EPG S +E+  + H F
Sbjct: 562 EPGVSWLEIRNVAHVF 577



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 195/405 (48%), Gaps = 42/405 (10%)

Query: 12  QTRQCHAHIIKTHFKFS------------------------YTNIINPLTRYNSLVTSYI 47
           + +QCH + +K+  +F                         YT   N +  YN +V   +
Sbjct: 141 EGKQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGAAIQILYTVPGNDIFCYNLVVNGLL 200

Query: 48  KNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAY 107
           ++   + A+++   +   G E +N T  TI + CA +    LGK++H   +K+ +D D Y
Sbjct: 201 QHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVY 260

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           + +++I MY +CG+++S R  FD + +R+VVSW+++I  Y +    EEAL +  +M    
Sbjct: 261 IGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEIDC 320

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCG 223
           I P+E  M  + +  A ++ + LG  +HA      + EK G    V +  ALI MY K G
Sbjct: 321 IPPNEYTMAVLFNSAAGLSALCLGDQLHA------RAEKSGLKGNVMVGNALIIMYFKSG 374

Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLII 283
           ++  A+ +F+ +   ++++W  +I+G+       E + +F +M+     P+ +T + +I+
Sbjct: 375 DILAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVIL 434

Query: 284 ECGFVGGLQLGKWLHAYILRNGFEF--SLAMANALVDMYGKCREIRSARTLFDGMK-SKD 340
            C  +  +  G +   ++++  F     L     +V +  +   +  A       + + D
Sbjct: 435 ACAHLKLVDEGFYYFNHLMKQ-FRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWD 493

Query: 341 VMIWNAVISA-YAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
           V+ W  +++A Y   H  DK  ++  ++   ++ P +V    LLS
Sbjct: 494 VVSWRTLLNACYVHKH-YDKGRKIAEYLL--QLEPRDVGTYILLS 535


>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Vitis vinifera]
          Length = 536

 Score =  350 bits (899), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 197/573 (34%), Positives = 299/573 (52%), Gaps = 47/573 (8%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALI---QMYSECGSLVSAR 126
            +F  P IL             + H   +K+GL    + ++ LI      S   ++  A 
Sbjct: 3   SSFPPPPILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAH 62

Query: 127 YLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            +F  +PN +   W+T+IR Y     PE AL +  +M    + P +      +      +
Sbjct: 63  SIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFS 122

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
            V+ G+ IH  V++    + L   I   LI +Y+ CG +  A+ L +R+ +  VVSW  +
Sbjct: 123 GVEEGRQIHGHVLKTGLGDDL--FIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNAL 180

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG-GLQLGKWLHAYILRNG 305
           +S Y     +     LF EM E NV      I       G+VG GL              
Sbjct: 181 LSAYAERGLMELACHLFDEMTERNVESWNFMI------SGYVGVGL-------------- 220

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
                               +  AR +F     K+V+ WNA+I+ Y+ A    +   LF 
Sbjct: 221 --------------------LEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFE 260

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            M+ + V+P+  T+V +LS C   GAL  G+W+H YI+K G+ +D  + TALVDMY+KCG
Sbjct: 261 DMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCG 320

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
            +  A  +F+  + +DI  WN++++G   HG G+ AL  F +M   G KPN +TF+ +L+
Sbjct: 321 SIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLS 380

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
           ACS AGL+ EG+ +F+ MVH  G+ P IEHYGCMVDLLGR GLL+EA E+++ MP +   
Sbjct: 381 ACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEAS 440

Query: 546 IVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVM 605
           +VW +LL A + H N  + E  A ++LE+ PQ     V +SN+YA   RW DV  VR+ M
Sbjct: 441 VVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKM 500

Query: 606 KEIRVKKEPGFSSVEVNGLVHKFIRG-GMVNWK 637
           +   V+K+PG S +EV+G V++F+ G G+V+ K
Sbjct: 501 RAQGVRKDPGCSMIEVDGTVYEFLAGEGLVSGK 533



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 215/477 (45%), Gaps = 70/477 (14%)

Query: 9   NLEQTRQCHAHIIKT---HFKFS-----------------------YTNIINPLTR-YNS 41
           ++ +  Q HAHI+K+   H  F+                       ++ I NP +  +N+
Sbjct: 19  SISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIPNPNSYMWNT 78

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           ++ +Y  +  P +AL I+  M       D +T    LK+C        G++IHG  +K G
Sbjct: 79  IIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTG 138

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
           L  D ++ N LI +Y+ CG +  AR+L D M  RDVVSW+ ++  Y   GL E A  +  
Sbjct: 139 LGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELACHLFD 198

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
           EM                                    RN +           +I  Y  
Sbjct: 199 EM----------------------------------TERNVESWNF-------MISGYVG 217

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
            G L  A+++F      +VVSW  MI+GY      +E + LF +M    V P   T++S+
Sbjct: 218 VGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSV 277

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +  C  VG L  G+W+HAYI +NG      +A ALVDMY KC  I  A  +F+    KD+
Sbjct: 278 LSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDI 337

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL-HT 400
             WN++IS  +       A ++F  M V   +PNEVT V +LS C+ AG L+ G+ + + 
Sbjct: 338 STWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNL 397

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC-MWNAMMAGYGMHG 456
            +   G++  +     +VD+  + G +  A  L  +   ++   +W +++     HG
Sbjct: 398 MVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHG 454



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 172/356 (48%), Gaps = 27/356 (7%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYA 60
           +K    F  +E+ RQ H H++K       T + + L   N+L+  Y        A ++  
Sbjct: 115 LKSCGSFSGVEEGRQIHGHVLK-------TGLGDDLFIQNTLIHLYASCGCIEDARHLLD 167

Query: 61  FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECG 120
            M     E D  +   +L A A+  +  L    H F      + +++  N +I  Y   G
Sbjct: 168 RML----ERDVVSWNALLSAYAERGLMELA--CHLFDEMTERNVESW--NFMISGYVGVG 219

Query: 121 SLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
            L  AR +F E P ++VVSW+ MI GY   G   E L +  +M+   ++P    ++S++S
Sbjct: 220 LLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLS 279

Query: 181 LFADVADVDLGKAIHACVVRNCKDEKLGVAI----ATALIDMYSKCGNLAYAKQLFNRLN 236
             A V  +  G+ +HA + +N      G++I    ATAL+DMYSKCG++  A ++FN   
Sbjct: 280 ACAHVGALSQGEWVHAYIDKN------GISIDGFVATALVDMYSKCGSIEKALEVFNSCL 333

Query: 237 QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
           +  + +W  +ISG          +++F+EM+ E   P+E+T + ++  C   G L  G+ 
Sbjct: 334 RKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGRE 393

Query: 297 LHAYILR-NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV-MIWNAVISA 350
           +   ++  +G + ++     +VD+ G+   +  A  L   M  K+  ++W +++ A
Sbjct: 394 MFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGA 449


>gi|125525521|gb|EAY73635.1| hypothetical protein OsI_01524 [Oryza sativa Indica Group]
          Length = 560

 Score =  350 bits (899), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 191/511 (37%), Positives = 288/511 (56%), Gaps = 8/511 (1%)

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV 179
           G++  AR LFDEMP RDVV+W+ M+ GY   GL  EAL+V R M      P+E  + S++
Sbjct: 17  GAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGAAPNEYTLSSVL 76

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN-LAYAKQLFNRLNQ- 237
           +         +   +HA  VR   D      +  ALID Y+     +  A++LF+ L   
Sbjct: 77  TACRGPCAPAMAMPLHAVAVRRGVDRM--PYVVNALIDSYASLAEGVVDARRLFDALGSG 134

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
            +  SWT MI+GY R  +   G+RLF  M+++ V  S       +  C  V  L LG+ L
Sbjct: 135 RTAASWTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALHACTLVIDLCLGQQL 194

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           H   ++   + +LA+ N+L+DMY  C  I  AR+LFDG   ++++ WN +I+ Y+Q   +
Sbjct: 195 HLQCIKKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTMIAGYSQCDPL 254

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
             A +L + M      PN  T+  + S C +  AL  GK +H  + ++    D+ +  AL
Sbjct: 255 -MALQLLLEMND---EPNCFTLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQMGNAL 310

Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
           VDMY+KCG +  A  +F     +D   W +M+AGYGM+G G EA+  F  M  +GV P+ 
Sbjct: 311 VDMYSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDH 370

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK 537
           + F+ L+++CSHAGLV EG + F  M++   L P  E YG +V+LL RAG L EA ++I 
Sbjct: 371 VVFLSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLID 430

Query: 538 SMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWND 597
           +MP  P+  VWGALL ASK+H N  MG +AA +I EI P +    +++++IYA  ++W +
Sbjct: 431 TMPFAPDEYVWGALLGASKMHNNVEMGRLAARKITEINPDDVKNYIMLASIYAAGSKWGE 490

Query: 598 VAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            A  RR ++ I  +KE G S +EV   ++ F
Sbjct: 491 YAFTRRSLRGIGSRKEAGISWIEVMDKMYSF 521



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 213/421 (50%), Gaps = 10/421 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + ++++ Y  N     AL+++  M   G+  + +T+ ++L AC       +   +H  A+
Sbjct: 37  WTAMLSGYASNGLRREALDVFRRMVAAGAAPNEYTLSSVLTACRGPCAPAMAMPLHAVAV 96

Query: 99  KNGLDGDAYVSNALIQMYSECGS-LVSARYLFDEM-PNRDVVSWSTMIRGYHRGGLPEEA 156
           + G+D   YV NALI  Y+     +V AR LFD +   R   SW++MI GY R G     
Sbjct: 97  RRGVDRMPYVVNALIDSYASLAEGVVDARRLFDALGSGRTAASWTSMIAGYARWGQERTG 156

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           L + + M    +  S  A    +     V D+ LG+ +H   ++   D  L  A+  +LI
Sbjct: 157 LRLFKTMLKDGVELSTFACSIALHACTLVIDLCLGQQLHLQCIKKALDVNL--AVVNSLI 214

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           DMY  C  +  A+ LF+   + ++++W  MI+GY +C+ +   ++L  EM +E   P+  
Sbjct: 215 DMYCTCARILDARSLFDGTPERNLITWNTMIAGYSQCDPL-MALQLLLEMNDE---PNCF 270

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T+ S+   C  +  L+ GK +H  +LR  +   L M NALVDMY KC  I +A+ +FD M
Sbjct: 271 TLTSITSACADLAALRCGKQVHGAVLRRSYSDDLQMGNALVDMYSKCGSITNAKNVFDRM 330

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG- 395
             KD   W ++I+ Y      ++A +LF  M  + V P+ V  + L+S C+ AG ++ G 
Sbjct: 331 GCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHVVFLSLISSCSHAGLVDEGW 390

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGM 454
            +  + I +  L+ +  +  ++V++ A+ G +  A  L     +  D  +W A++    M
Sbjct: 391 NFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLIDTMPFAPDEYVWGALLGASKM 450

Query: 455 H 455
           H
Sbjct: 451 H 451



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/372 (30%), Positives = 189/372 (50%), Gaps = 14/372 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + S++  Y +  +  + L ++  M K+G E+  F     L AC  V+   LG+++H   I
Sbjct: 140 WTSMIAGYARWGQERTGLRLFKTMLKDGVELSTFACSIALHACTLVIDLCLGQQLHLQCI 199

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K  LD +  V N+LI MY  C  ++ AR LFD  P R++++W+TMI GY +   P  AL+
Sbjct: 200 KKALDVNLAVVNSLIDMYCTCARILDARSLFDGTPERNLITWNTMIAGYSQCD-PLMALQ 258

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++ E   M+  P+   + S+ S  AD+A +  GK +H  V+R    + L   +  AL+DM
Sbjct: 259 LLLE---MNDEPNCFTLTSITSACADLAALRCGKQVHGAVLRRSYSDDL--QMGNALVDM 313

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSKCG++  AK +F+R+      SWT MI+GY      NE V+LF+ MI   V P  +  
Sbjct: 314 YSKCGSITNAKNVFDRMGCKDKFSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHVVF 373

Query: 279 LSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           LSLI  C   G +  G  +  + I     + +  +  ++V++  +   +R A  L D M 
Sbjct: 374 LSLISSCSHAGLVDEGWNFFRSMINEYNLQPNKEVYGSVVNLLARAGRLREALDLIDTMP 433

Query: 338 -SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
            + D  +W A++ A    + ++         K++++ P++V    +L+    AG+    K
Sbjct: 434 FAPDEYVWGALLGASKMHNNVEMG--RLAARKITEINPDDVKNYIMLASIYAAGS----K 487

Query: 397 WLHTYIEKQGLE 408
           W      ++ L 
Sbjct: 488 WGEYAFTRRSLR 499



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 90/174 (51%), Gaps = 5/174 (2%)

Query: 18  AHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTI 77
           A I+     F  T   N +T +N+++  Y + + P  AL +   M     E + FT+ +I
Sbjct: 221 ARILDARSLFDGTPERNLIT-WNTMIAGYSQCD-PLMALQLLLEMND---EPNCFTLTSI 275

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
             ACA +     GK++HG  ++     D  + NAL+ MYS+CGS+ +A+ +FD M  +D 
Sbjct: 276 TSACADLAALRCGKQVHGAVLRRSYSDDLQMGNALVDMYSKCGSITNAKNVFDRMGCKDK 335

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
            SW++MI GY   G   EA+++   M    + P  V  +S++S  +    VD G
Sbjct: 336 FSWTSMIAGYGMNGYGNEAVQLFSSMIHAGVHPDHVVFLSLISSCSHAGLVDEG 389



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 34/73 (46%)

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
           T  +      G V  A  LF E   RD+  W AM++GY  +G   EAL  F  M  +G  
Sbjct: 7   TTFISSLCSRGAVCHARALFDEMPERDVVAWTAMLSGYASNGLRREALDVFRRMVAAGAA 66

Query: 475 PNGITFIGLLNAC 487
           PN  T   +L AC
Sbjct: 67  PNEYTLSSVLTAC 79


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 189/560 (33%), Positives = 319/560 (56%), Gaps = 4/560 (0%)

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           +  +L+ C++  +   G ++H  A+  G   D  ++N LI MY +C  +  A  +FD M 
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
            R+VVSW+ ++ GY + G  + +L ++ EM +  ++P+E    + +     +  V+ G  
Sbjct: 67  ERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQ 126

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           IH   V++   E + V +  A IDMYSKCG +  A+Q+FN++   ++VSW  MI+G+   
Sbjct: 127 IHGMCVKS-GFEWVSV-VGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHE 184

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA-- 311
               + + LF  M  +   P E T  S +  CG +G ++ G  +HA ++  GF  S+   
Sbjct: 185 GNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNI 244

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           +A+A+VD+Y KC  +  A+ +FD ++ K+++ W+A+I  +AQ   + +A +LF  ++ S 
Sbjct: 245 IASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESV 304

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
              +   +  ++ +  +   +E GK +H YI K    +D+ +  +++DMY KCG    A 
Sbjct: 305 SNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAE 364

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
           RLFSE   R++  W  M+ GYG HG GE+A+  F  M+  G++ + + ++ LL+ACSH+G
Sbjct: 365 RLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSG 424

Query: 492 LVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
           L+ E +  F ++ +   + P IEHY CMVD+LGRAG L EA  +I++M L+PN  +W  L
Sbjct: 425 LIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTL 484

Query: 552 LAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVK 611
           L+A ++H N  +G      +  ++  N    V+MSNIYA A  W +   VR+++K   +K
Sbjct: 485 LSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLK 544

Query: 612 KEPGFSSVEVNGLVHKFIRG 631
           KE G S VE+N  +H F  G
Sbjct: 545 KEAGQSWVEINKEIHFFYGG 564



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 160/613 (26%), Positives = 292/613 (47%), Gaps = 51/613 (8%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+  Y++      +L +   M  +G + + FT  T LKAC  + +   G +IHG  +
Sbjct: 73  WTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCV 132

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G +  + V NA I MYS+CG +  A  +F++MP R++VSW+ MI G+   G   ++L 
Sbjct: 133 KSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLV 192

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + + M+     P E    S +     +  +  G  IHA ++       +   IA+A++D+
Sbjct: 193 LFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDL 252

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG L  A+++F+R+ Q +++SW+ +I G+ +   + E + LF ++  E+V   +  +
Sbjct: 253 YAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQL-RESVSNVDGFV 311

Query: 279 LSLIIECGFVGGLQL---GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           LS+++  G    L L   GK +H YIL+      +++AN+++DMY KC     A  LF  
Sbjct: 312 LSIMM--GVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSE 369

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL-EM 394
           M+ ++V+ W  +I+ Y +    +KA  LF  M++  +  +EV  + LLS C+ +G + E 
Sbjct: 370 MQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRES 429

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYG 453
            ++         ++ ++     +VD+  + G +  A  L     +  +  +W  +++   
Sbjct: 430 QEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACR 489

Query: 454 MHG---CGEEA--LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +HG    G E   ++F +D +      N + ++ + N  + AG   E + V  K+V   G
Sbjct: 490 VHGNLEIGREVGEILFRMDTD------NPVNYVMMSNIYAEAGYWKECERV-RKLVKAKG 542

Query: 509 L----------VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           L          + K  H+    D      L ++ HEM+K M  R    V  A      LH
Sbjct: 543 LKKEAGQSWVEINKEIHFFYGGD--DTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFALH 600

Query: 559 KNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSS 618
               + E +  + L +  +     + +     V +      GV RV K +R         
Sbjct: 601 ---DVEEESKEENLRVHSEKLAIGLAL-----VCDGMEKKGGVIRVFKNLR--------- 643

Query: 619 VEVNGLVHKFIRG 631
             V G  H+FI+G
Sbjct: 644 --VCGDCHEFIKG 654



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 171/319 (53%), Gaps = 6/319 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++  +        +L ++  M+  G   D FT  + LKAC  +     G +IH 
Sbjct: 171 LVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHA 230

Query: 96  FAIKNG--LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
             I  G  +     +++A++ +Y++CG L  A+ +FD +  ++++SWS +I+G+ + G  
Sbjct: 231 SLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNL 290

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            EA+++ R++R          +  M+ +FAD+A V+ GK +H  +++      L +++A 
Sbjct: 291 LEAMDLFRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILK--VPSGLDISVAN 348

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ++IDMY KCG    A++LF+ +   +VVSWTVMI+GY +     + + LF  M  + +  
Sbjct: 349 SIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIEL 408

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTL 332
            E+  L+L+  C   G ++  +   + +  N   + ++     +VD+ G+  +++ A+ L
Sbjct: 409 DEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNL 468

Query: 333 FDGMKSK-DVMIWNAVISA 350
            + MK K +  IW  ++SA
Sbjct: 469 IENMKLKPNEGIWQTLLSA 487


>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
 gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
 gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
          Length = 705

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 197/584 (33%), Positives = 321/584 (54%), Gaps = 7/584 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +N+++   +   + S AL ++  M  +GS  VD FT P ++KACA +     G+++    
Sbjct: 122 WNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMV 181

Query: 98  IKNGLDGDA----YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
             +   G+A    +V  AL+ M+++CG L  AR +F+ M  RD+ +W+ MI G    G  
Sbjct: 182 ETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNW 241

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            E +++   MR        +   +++S      ++ +G A+H C V++       + ++ 
Sbjct: 242 LEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGD--IYVSN 299

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMY KCG +  A  LF   N   VVSW+ +I GY +    N  V LF EMI   + P
Sbjct: 300 ALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINP 359

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +  T+ S++     +  ++ GK +H + +R+G E S  + +AL+D+Y K   IR A T+F
Sbjct: 360 NSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIF 419

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
                KD+ IWN++++ YA     D AF     ++   ++P+ VT+V +L LC +   L 
Sbjct: 420 WLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLI 479

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            GK LH Y+ K  +     +  AL+DMY KCG +  A  +F     R+   +N +++ +G
Sbjct: 480 QGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFG 539

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            H   ++AL FF  M+R G+ P+ +TF+ LL+ CSHAGL+ +G  ++  M+H   + P+ 
Sbjct: 540 KHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEK 599

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHY C+VDL  R G LDEA   + +M   P + V G LLAA ++H    + E+   +I E
Sbjct: 600 EHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFE 659

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
             P + GY++L+SNIYA A  W+DV  +R +++E  +KKE G S
Sbjct: 660 QNPNDPGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKETGNS 703



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 211/404 (52%), Gaps = 3/404 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  + +++   + +      ++++  MR  G  VD+    T++ AC +     +G  
Sbjct: 222 VRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTA 281

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HG A+K+G  GD YVSNAL+ MY +CG +  A  LF    ++DVVSWS++I GY + G+
Sbjct: 282 LHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGM 341

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
              ++ +  EM  + I P+   + S++   + +  +  GK IH   +R+  +      + 
Sbjct: 342 HNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERS--EFVV 399

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           +ALID+YSK G +  A+ +F       +  W  M++GY      +        + +  + 
Sbjct: 400 SALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLK 459

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P  +T++S++  C     L  GK LHAY+++       ++ NAL+DMY KC  +  A+ +
Sbjct: 460 PDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEV 519

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F  M  ++ + +N +IS++ + +  D+A   F  MK   + P++VT V LLS C+ AG +
Sbjct: 520 FQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLI 579

Query: 393 EMGKWL-HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
           + G  L H+ +    +  +    + +VD+Y++CG ++ A+   S
Sbjct: 580 DKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMS 623



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 237/479 (49%), Gaps = 15/479 (3%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
            + +H   +  G      +   L++ Y++ G +  A  +FD MP R+  +W+ +I+G   
Sbjct: 72  ARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVD 131

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAM-----ISMVSLFADVADVDLGKAIHACVVRNCK- 203
            G   EALE+   M    +    VA+       ++   A +  V  G+ +   V  +   
Sbjct: 132 AGRFSEALEMFWGM----VNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVETDIAS 187

Query: 204 -DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
            + +  V +  AL+DM++KCG L  A+ +F  +    + +WT MI G +      E V L
Sbjct: 188 GNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDL 247

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F  M  E      +   ++I  CG  G LQ+G  LH   +++G    + ++NALVDMY K
Sbjct: 248 FNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCK 307

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C  +  A  LF    SKDV+ W+++I  Y+Q    + +  LF  M    + PN  T+  +
Sbjct: 308 CGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASI 367

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           L   +    +  GK +H +  + GLE    + +AL+D+Y+K G +  A  +F   + +D+
Sbjct: 368 LPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDL 427

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
            +WN+M+AGY ++G  + A      +++ G+KP+ +T + +L  C+   ++ +GK +   
Sbjct: 428 AIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAY 487

Query: 503 MV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
           ++ + +  V  + +   ++D+  + G L+ A E+ + M  R N + +  L+++   H +
Sbjct: 488 VIKYCINSVCSVNN--ALLDMYCKCGFLEVAKEVFQLMTER-NTVTYNILISSFGKHNH 543



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 7/278 (2%)

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           SL++        Q  + LHA +L  G      +   LV  Y K  ++  A  +FDGM  +
Sbjct: 58  SLLLRLQSCPDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRR 117

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGK-- 396
           +   WNAVI     A    +A E+F  M     V  +  T   ++  C   GA+  G+  
Sbjct: 118 NSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKV 177

Query: 397 W--LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           W  + T I       +V ++ ALVDM+AKCG ++ A  +F     RD+  W AM+ G   
Sbjct: 178 WEMVETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVH 237

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
            G   E +  F  M   G   + +    +++AC  AG +  G ++    V   G    I 
Sbjct: 238 SGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKS-GASGDIY 296

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
               +VD+  + G ++ A  +  S   + +++ W +L+
Sbjct: 297 VSNALVDMYCKCGCVEMADCLFWSTNSK-DVVSWSSLI 333


>gi|255565124|ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223537116|gb|EEF38749.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 611

 Score =  350 bits (899), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 194/587 (33%), Positives = 305/587 (51%), Gaps = 45/587 (7%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + ++   Y+++      +  Y FM+ +    DN+  P +L+AC Q+L    G  IH   I
Sbjct: 64  WTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHKDVI 123

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G + +  V N+LI MY +CG+  SAR +F+EM  RD+ SW++MI GY   GL + A+E
Sbjct: 124 VCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADLAVE 183

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++  MR     P                                      V     L+D 
Sbjct: 184 LLNCMRLDGFEPD-------------------------------------VVTWNTLMDA 206

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI-EENVFPSEIT 277
           Y + G    A ++  ++ Q +++SWT +IS Y +  E +  +R+F +MI  E V P    
Sbjct: 207 YCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPDLDC 266

Query: 278 ILSLIIECGFVGGLQLGKWLHAY--ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           + S+++ C  +G L+ GK +H Y   +     F  +   AL+ MY KC  I+ A  +F+ 
Sbjct: 267 LCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQDAINVFEL 326

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M   D++ WNA+I  + +     +A E F  M+   ++ ++ T+  +L +C     L+ G
Sbjct: 327 MDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTISTILPVCD----LQYG 382

Query: 396 KWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
             +H Y+ K   L   V +  A++ MY KCG V  AY +F     +D+  WN M+ G+GM
Sbjct: 383 NPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNKDVVSWNTMIGGFGM 442

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           HG G+ AL    +M  SG+ PN  TF  +L+ACSH+GLV EG  +F  M     + P++E
Sbjct: 443 HGHGQAALKLLKEMILSGIFPNSTTFTSVLSACSHSGLVDEGFRLFRSMTEDYSITPRME 502

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HY C+VD+L RAG   +A   I  MPL P+  +WGALLAA + ++N   G +AA Q++ +
Sbjct: 503 HYSCIVDMLARAGQFADAVTFIHKMPLEPDKSIWGALLAACRAYQNLDFGRLAAEQLIRM 562

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
           EP+  G+ V +SNIYA A RW+D   VR+ ++   + K  G S +E 
Sbjct: 563 EPKCAGHYVTLSNIYARAGRWDDAGRVRKEIEGKGLVKPSGQSLIET 609



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 218/487 (44%), Gaps = 49/487 (10%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +L+ C+ +   H GK+IH     +G   D ++   LIQMY++C  L SA+ LFD+MP  +
Sbjct: 1   MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPN 60

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           V +W+ +   Y R G+ ++ ++    M++ D+ P       ++     +   + G  IH 
Sbjct: 61  VYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHK 120

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
            V+  C  E   + +  +LIDMY KCGN   A+ +F  + +  + SW  MISGY+     
Sbjct: 121 DVIV-CGCES-NLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLA 178

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
           +  V L   M                                     +GFE  +   N L
Sbjct: 179 DLAVELLNCM-----------------------------------RLDGFEPDVVTWNTL 203

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPN 375
           +D Y +      A  +   ++  +++ W  +IS+Y++    D +  +F  M + + V P+
Sbjct: 204 MDAYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSPD 263

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT----ALVDMYAKCGDVNGAY 431
              +  +L  C   GAL  GK +H Y  K  +E + +  +    AL+ MYAKCG +  A 
Sbjct: 264 LDCLCSVLVSCRHIGALRSGKEIHGYGTK--METNTVFYSSAGAALLTMYAKCGRIQDAI 321

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
            +F      DI  WNAM+ G+     G++A+  F +M+R  +K +  T   +L  C    
Sbjct: 322 NVFELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTISTILPVCD--- 378

Query: 492 LVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
            +  G  +   +   + L   +  +  ++ +  + G +  A+ +  SMP   +++ W  +
Sbjct: 379 -LQYGNPIHAYVRKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMP-NKDVVSWNTM 436

Query: 552 LAASKLH 558
           +    +H
Sbjct: 437 IGGFGMH 443


>gi|15233292|ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22150, chloroplastic; Flags: Precursor
 gi|11994734|dbj|BAB03063.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|110739449|dbj|BAF01634.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643073|gb|AEE76594.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 820

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 196/599 (32%), Positives = 338/599 (56%), Gaps = 11/599 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L++ Y+K  + + A   +  M +   +    +   +  A +           +G  +
Sbjct: 182 WNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLML 241

Query: 99  KNGLD--GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
           K G +   D +V ++ I MY+E G + S+R +FD    R++  W+TMI  Y +     E+
Sbjct: 242 KLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVES 301

Query: 157 LEVMRE-MRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           +E+  E +   +I   EV  +   S  + +  V+LG+  H  V +N ++  L + I  +L
Sbjct: 302 IELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRE--LPIVIVNSL 359

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           + MYS+CG++  +  +F  + +  VVSW  MIS +++    +EG+ L  EM ++      
Sbjct: 360 MVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDY 419

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           IT+ +L+     +   ++GK  HA+++R G +F   M + L+DMY K   IR ++ LF+G
Sbjct: 420 ITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEG 478

Query: 336 --MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
                +D   WN++IS Y Q    +K F +F  M    +RPN VT+  +L  C++ G+++
Sbjct: 479 SGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVD 538

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           +GK LH +  +Q L+ +V + +ALVDMY+K G +  A  +FS+   R+   +  M+ GYG
Sbjct: 539 LGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYG 598

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            HG GE A+  F+ M+ SG+KP+ ITF+ +L+ACS++GL+ EG  +F++M     + P  
Sbjct: 599 QHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSS 658

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI-VWGALLAASKLHKNPSMGEIAATQIL 572
           EHY C+ D+LGR G ++EA+E +K +    N+  +WG+LL + KLH    + E  + ++ 
Sbjct: 659 EHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLA 718

Query: 573 EIEP-QNY-GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           + +  +N+ GY VL+SN+YA   +W  V  VRR M+E  +KKE G S +E+ G V+ F+
Sbjct: 719 KFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFV 777



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 145/563 (25%), Positives = 276/563 (49%), Gaps = 26/563 (4%)

Query: 29  YTNIINPLT-RYNSLVTSYIKNNKPSSALNIYAFMRKNG--SEVDNFTIPTILKACAQVL 85
           +  I  P T  +N+++  +I NN P  AL  Y+ M+K    +  D +T  + LKACA+  
Sbjct: 62  FDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETK 121

Query: 86  MTHLGKEIHGFAIKNGLDGDAYVSNALIQMY------SECGSLVSARYLFDEMPNRDVVS 139
               GK +H   I+   +    V N+L+ MY       +C      R +FD M  ++VV+
Sbjct: 122 NLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVA 181

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           W+T+I  Y + G   EA      M  M+++PS V+ +++    +    +      +  ++
Sbjct: 182 WNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLML 241

Query: 200 RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
           +   +    + + ++ I MY++ G++  ++++F+   + ++  W  MI  Y++ + + E 
Sbjct: 242 KLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVES 301

Query: 260 VRLFAEMI-EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
           + LF E I  + +   E+T L        +  ++LG+  H ++ +N  E  + + N+L+ 
Sbjct: 302 IELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV 361

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
           MY +C  +  +  +F  M+ +DV+ WN +ISA+ Q    D+   L   M+    + + +T
Sbjct: 362 MYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYIT 421

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
           +  LLS  +     E+GK  H ++ +QG++ +  + + L+DMY+K G +  + +LF  + 
Sbjct: 422 VTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSG 480

Query: 439 Y--RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
           Y  RD   WN+M++GY  +G  E+  + F  M    ++PN +T   +L ACS  G V  G
Sbjct: 481 YAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLG 540

Query: 497 KSVFDKMVHGLGLVPKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           K      +HG  +   ++        +VD+  +AG +  A +M      R N + +  ++
Sbjct: 541 KQ-----LHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKER-NSVTYTTMI 594

Query: 553 AASKLHKNPSMGEIAATQILEIE 575
                H    MGE A +  L ++
Sbjct: 595 LGYGQH---GMGERAISLFLSMQ 614



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/447 (24%), Positives = 221/447 (49%), Gaps = 26/447 (5%)

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR----FMDIRPSEVAMISMVS 180
           AR LFD +P    V W+T+I G+    LP EAL     M+    F +      +  S + 
Sbjct: 58  ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYS--STLK 115

Query: 181 LFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLA------YAKQLFNR 234
             A+  ++  GKA+H  ++R  ++      +  +L++MY  C N          +++F+ 
Sbjct: 116 ACAETKNLKAGKAVHCHLIRCLQNSSR--VVHNSLMNMYVSCLNAPDCFEYDVVRKVFDN 173

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           + + +VV+W  +IS Y++     E  R F  M+   V PS ++ +++         ++  
Sbjct: 174 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKA 233

Query: 295 KWLHAYILRNGFEF--SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
              +  +L+ G E+   L + ++ + MY +  +I S+R +FD    +++ +WN +I  Y 
Sbjct: 234 NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYV 293

Query: 353 QAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
           Q  C+ ++ ELF+    SK +  +EVT +   S  +    +E+G+  H ++ K   E+ +
Sbjct: 294 QNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPI 353

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
           ++  +L+ MY++CG V+ ++ +F     RD+  WN M++ +  +G  +E L+   +M++ 
Sbjct: 354 VIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 413

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC---MVDLLGRAGL 528
           G K + IT   LL+A S+       K +  K  H   +   I+  G    ++D+  ++GL
Sbjct: 414 GFKIDYITVTALLSAASN----LRNKEI-GKQTHAFLIRQGIQFEGMNSYLIDMYSKSGL 468

Query: 529 LDEAHEMIK-SMPLRPNMIVWGALLAA 554
           +  + ++ + S     +   W ++++ 
Sbjct: 469 IRISQKLFEGSGYAERDQATWNSMISG 495



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 165/343 (48%), Gaps = 13/343 (3%)

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS--EITILS 280
           GN   A+QLF+ + + + V W  +I G+I  N  +E +  ++ M +   F +    T  S
Sbjct: 53  GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY------GKCREIRSARTLFD 334
            +  C     L+ GK +H +++R     S  + N+L++MY        C E    R +FD
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M+ K+V+ WN +IS Y +     +A   F  M   +V+P+ V+ V +    + + +++ 
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232

Query: 395 GKWLHTYIEKQGLEV--DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
               +  + K G E   D+ + ++ + MYA+ GD+  + R+F   + R+I +WN M+  Y
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVY 292

Query: 453 GMHGCGEEALIFFVD-MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
             + C  E++  F++ +    +  + +T++   +A S    V  G+     +      +P
Sbjct: 293 VQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP 352

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            +     MV +  R G + ++  +  SM  R +++ W  +++A
Sbjct: 353 IVIVNSLMV-MYSRCGSVHKSFGVFLSMRER-DVVSWNTMISA 393


>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Cucumis sativus]
          Length = 781

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 213/621 (34%), Positives = 337/621 (54%), Gaps = 23/621 (3%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           + N+ +P +  +N++++ +    K  +AL+    M  NG + D+ T  T L  C      
Sbjct: 131 FQNLHDPDIVSWNTILSGF---EKSENALSFALRMNLNGVKFDSVTYTTALSFCLDGEEF 187

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
             G ++H  A+K G  GD +V NAL+ MYS    LV AR +FDEMP+RD VSWS MI GY
Sbjct: 188 LFGWQLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGY 247

Query: 148 -HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
              G    +A+ V  +M    ++   V +   +S+     +++LGK IH   V+   +  
Sbjct: 248 AQEGDNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETH 307

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG-VRLFAE 265
              ++   LI  YSKC  +  AK +F  +N  +V+SWT MIS Y       EG V LF +
Sbjct: 308 --TSVGNVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLY------EEGAVSLFNK 359

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M  + V+P+++T + L+        ++ G  +H   ++  F   L + N+L+ MY K   
Sbjct: 360 MRLDGVYPNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEF 419

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           ++ A  +F  +  ++++ WNA+IS YAQ     +A E F++  + + +PNE T   +L+ 
Sbjct: 420 MQDASRVFIELPYREIISWNALISGYAQNALCQEALEAFLY-AIMEYKPNEYTFGSVLNA 478

Query: 386 CT--EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
            +  E  +L+ G+  H+++ K GL VD I+  AL+DMYAK G +  + R+F+E   +   
Sbjct: 479 ISAGEDISLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQF 538

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            W A+++GY  HG  E  +  F +ME+  +KP+ + F+ +L ACS   +V  G+  F+ M
Sbjct: 539 AWTALISGYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMM 598

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
           +    + P+ EHY CMVD+LGRAG L+EA E++  +P  P +    +LL A + H N  M
Sbjct: 599 IKDHMIEPEGEHYSCMVDMLGRAGRLEEAEEILARIPGGPGVSALQSLLGACRTHGNVEM 658

Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV-- 621
            E  A  +++ EP   G  VLMSN+YA    W  VA VR+ M+E  V KE GFS V+V  
Sbjct: 659 AERIANDLMKKEPLESGPYVLMSNLYAQKGDWEKVAKVRKEMRERGVMKEIGFSWVDVGN 718

Query: 622 ----NGLVHKFIRGGMVNWKS 638
               N  +H F  G + + +S
Sbjct: 719 FGASNLYLHGFSSGDVSHPQS 739



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 150/528 (28%), Positives = 256/528 (48%), Gaps = 26/528 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYA--FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGF 96
           +N ++ +Y+  +    +L  +   F        D FT+   LKAC       LG++IHGF
Sbjct: 41  FNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLALKACCG--FPKLGRQIHGF 98

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
            I +G      VSN+L+ MY + G L  A  +F  + + D+VSW+T++ G+ +    E A
Sbjct: 99  VISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTILSGFEKS---ENA 155

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           L     M    ++   V   + +S   D  +   G  +H   ++ C   K  V +  AL+
Sbjct: 156 LSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALK-C-GFKGDVFVGNALV 213

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-EGVRLFAEMIEENVFPSE 275
            MYS+  +L  A+++F+ +     VSW+ MI+GY +  +   + + +F +M+ E V    
Sbjct: 214 TMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFVQMVREGVKFDN 273

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           + I   +  CG    L+LGK +H   ++ G E   ++ N L+  Y KC  I  A+ +F+ 
Sbjct: 274 VPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYSKCEIIEDAKAVFEL 333

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +  ++V+ W  +IS Y +      A  LF  M++  V PN+VT +GLL   T    +E G
Sbjct: 334 INDRNVISWTTMISLYEEG-----AVSLFNKMRLDGVYPNDVTFIGLLHAITIRNMVEQG 388

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             +H    K     ++ +  +L+ MYAK   +  A R+F E  YR+I  WNA+++GY  +
Sbjct: 389 LMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRVFIELPYREIISWNALISGYAQN 448

Query: 456 GCGEEAL--IFFVDMERSGVKPNGITFIGLLNACSHAGLVT--EGKSVFDKMVH-GLGLV 510
              +EAL    +  ME    KPN  TF  +LNA S    ++   G+     ++  GL + 
Sbjct: 449 ALCQEALEAFLYAIME---YKPNEYTFGSVLNAISAGEDISLKHGQRCHSHLIKVGLNVD 505

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           P I   G ++D+  + G + E+  +      + +   W AL++    H
Sbjct: 506 PIIS--GALLDMYAKRGSIQESQRVFNETS-KQSQFAWTALISGYAQH 550


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 195/593 (32%), Positives = 325/593 (54%), Gaps = 7/593 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++++ Y      S    +++ MR +G   D  T+ +++  CA       G  IH   +
Sbjct: 214 WNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCL 273

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++ LD    V NAL+ MYS  G L  A +LF  M  RD++SW+TMI  Y +     +AL+
Sbjct: 274 RSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALK 333

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
            + ++   +  P+ +   S +   +    +  GK +HA V++      L   +  +LI M
Sbjct: 334 TLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNL--LVGNSLITM 391

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC ++  A+++F  +  + +VS+ V+I GY    +  + +++F+ M    + P+ IT+
Sbjct: 392 YGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITM 451

Query: 279 LSLIIECGFVGGLQL---GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           ++  I   F     L   G+ LHAYI+R GF     +AN+L+ MY KC  + S+  +F+ 
Sbjct: 452 IN--IHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNS 509

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           + +K+++ WNA+I+A  Q    ++A +LFI M+ +  + + V +   LS C    +LE G
Sbjct: 510 ITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEG 569

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
             LH    K GL+ D  +  A +DMY KCG ++   ++  +   R    WN +++GY  +
Sbjct: 570 MQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKY 629

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G  +EA   F  M  +G KP+ +TF+ LL+ACSHAGLV +G   ++ M    G+ P I+H
Sbjct: 630 GYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKH 689

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
             C+VDLLGR G   EA + I+ MP+ PN ++W +LL++S+ HKN  +G   A ++LE++
Sbjct: 690 CVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELD 749

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           P +    VL+SN+YA   RW DV  +R  MK I + K P  S +++   V  F
Sbjct: 750 PFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTF 802



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 148/521 (28%), Positives = 260/521 (49%), Gaps = 13/521 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+ +   N     AL  Y  MR++G   +     T++  C  +     G ++    I
Sbjct: 113 WTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVI 172

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +GL     V+N+LI M+   G +  A  LFD M   D +SW+ MI  Y   G+  +   
Sbjct: 173 VSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFL 232

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V  +MR   +RP    + S++S+ A       G  IH+  +R+  D    V +  AL++M
Sbjct: 233 VFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSS--VTVINALVNM 290

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YS  G L+ A+ LF  +++  ++SW  MIS Y++     + ++   ++   N  P+ +T 
Sbjct: 291 YSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTF 350

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +  C   G L  GK +HA +L+   + +L + N+L+ MYGKC  +  A  +F  M +
Sbjct: 351 SSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPT 410

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL-SLCTEAGALEMGKW 397
            D++ +N +I  YA      KA ++F  M+ + ++PN +TM+ +  S  +       G+ 
Sbjct: 411 HDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRP 470

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH YI + G   D  +  +L+ MYAKCG++  +  +F+    ++I  WNA++A     G 
Sbjct: 471 LHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGH 530

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           GEEAL  F+DM+ +G K + +     L++C+    + EG       +HGLG+   ++   
Sbjct: 531 GEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEG-----MQLHGLGMKSGLDSDS 585

Query: 518 CMV----DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            +V    D+ G+ G +DE  +++    +RP    W  L++ 
Sbjct: 586 YVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQ-CWNTLISG 625



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 140/525 (26%), Positives = 257/525 (48%), Gaps = 9/525 (1%)

Query: 35  PLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH---LGK 91
           P T Y + V+  ++  +  +A  +   MR+ G  +  F + +++ AC +         G 
Sbjct: 6   PSTWYTA-VSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGA 64

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            IH    + GL G+ Y+  AL+ +Y   G +  A+ LF EMP R+VVSW+ ++      G
Sbjct: 65  AIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNG 124

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
             EEAL   R+MR   +  +  A  ++VSL   + +   G  + + V+ +    +  V++
Sbjct: 125 YLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQ--VSV 182

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
           A +LI M+   G +  A++LF+R+ ++  +SW  MIS Y      ++   +F++M    +
Sbjct: 183 ANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGL 242

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P   T+ SL+  C        G  +H+  LR+  + S+ + NALV+MY    ++  A  
Sbjct: 243 RPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEF 302

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           LF  M  +D++ WN +IS+Y Q      A +    +  +   PN +T    L  C+  GA
Sbjct: 303 LFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGA 362

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L  GK +H  + +  L+ ++++  +L+ MY KC  +  A ++F      DI  +N ++ G
Sbjct: 363 LIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGG 422

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA-CSHAGLVTEGKSVFDKMVHGLGLV 510
           Y +   G +A+  F  M  +G+KPN IT I +  +  S   L   G+ +   ++   G +
Sbjct: 423 YAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIR-TGFL 481

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAAS 555
                   ++ +  + G L+ +  +  S+    N++ W A++AA+
Sbjct: 482 SDEYVANSLITMYAKCGNLESSTNIFNSIT-NKNIVSWNAIIAAN 525



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 207/425 (48%), Gaps = 9/425 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N++++SY++N   + AL     +       ++ T  + L AC+       GK +H 
Sbjct: 312 LISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHA 371

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             ++  L  +  V N+LI MY +C S+  A  +F  MP  D+VS++ +I GY       +
Sbjct: 372 IVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTK 431

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADV-DLGKAIHACVVRN--CKDEKLGVAIA 212
           A++V   MR   I+P+ + MI++   FA   D+ + G+ +HA ++R     DE     +A
Sbjct: 432 AMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEY----VA 487

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            +LI MY+KCGNL  +  +FN +   ++VSW  +I+  ++     E ++LF +M      
Sbjct: 488 NSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNK 547

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
              + +   +  C  +  L+ G  LH   +++G +    + NA +DMYGKC ++     +
Sbjct: 548 LDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQV 607

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
                 +    WN +IS YA+     +A E F  M  +  +P+ VT V LLS C+ AG +
Sbjct: 608 VPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLV 667

Query: 393 EMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMA 450
           + G  + ++     G+   +     +VD+  + G    A +   E  +  +  +W ++++
Sbjct: 668 DKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLS 727

Query: 451 GYGMH 455
               H
Sbjct: 728 SSRTH 732



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 132/512 (25%), Positives = 241/512 (47%), Gaps = 25/512 (4%)

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA---DV 188
           M +R   +W T + G  R G    A E++R MR   +  S  A+ S+V+          +
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 189 DLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
             G AIHA   R        V I TAL+ +Y   G ++ A++LF  + + +VVSWT ++ 
Sbjct: 61  ACGAAIHALTHR--AGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMV 118

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
                  + E +R + +M  + V  +     +++  CG +     G  + + ++ +G + 
Sbjct: 119 ALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQN 178

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
            +++AN+L+ M+G    +  A  LFD M+  D + WNA+IS Y+      K F +F  M+
Sbjct: 179 QVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMR 238

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
              +RP+  T+  L+S+C  +     G  +H+   +  L+  V +  ALV+MY+  G ++
Sbjct: 239 HHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLS 298

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A  LF     RD+  WN M++ Y  +    +AL     +  +   PN +TF   L ACS
Sbjct: 299 DAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACS 358

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
             G + +G     KMVH + L   ++        ++ + G+   +++A ++ +SMP   +
Sbjct: 359 SPGALIDG-----KMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTH-D 412

Query: 545 MIVWGALLAASKLHKN--PSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVR 602
           ++ +  L+    + ++   +M   +  +   I+P NY   + M NI+      ND+    
Sbjct: 413 IVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKP-NY---ITMINIHGSFASSNDLHNYG 468

Query: 603 RVMKEIRVKKEPGFSSVE--VNGLVHKFIRGG 632
           R +    ++   GF S E   N L+  + + G
Sbjct: 469 RPLHAYIIRT--GFLSDEYVANSLITMYAKCG 498



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 130/292 (44%), Gaps = 28/292 (9%)

Query: 14  RQCHAHIIKTHFKF-------------------SYTNIINPLTR-----YNSLVTSYIKN 49
           R  HA+II+T F                     S TNI N +T      +N+++ + ++ 
Sbjct: 469 RPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQL 528

Query: 50  NKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVS 109
                AL ++  M+  G+++D   +   L +CA +     G ++HG  +K+GLD D+YV 
Sbjct: 529 GHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVV 588

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
           NA + MY +CG +     +  +   R    W+T+I GY + G  +EA E  ++M     +
Sbjct: 589 NAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRK 648

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           P  V  ++++S  +    VD G   +  +  +      G+     ++D+  + G  A A+
Sbjct: 649 PDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSP-GIKHCVCIVDLLGRLGRFAEAE 707

Query: 230 QLFNRLN--QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
           +    +    N ++ W  ++S       +  G +   +++E + F     +L
Sbjct: 708 KFIEEMPVLPNDLI-WRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVL 758


>gi|359489798|ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 804

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 184/551 (33%), Positives = 313/551 (56%), Gaps = 4/551 (0%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF 129
           ++ T+ ++++A + + +  + + I G  IK G + +  V+ ALI  YS+    +  + +F
Sbjct: 9   NHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSDYDMGIVWK-IF 67

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           ++ P +D+V WS M+    + G   EA E+ R M++  + P+ V+++S++   A+V  + 
Sbjct: 68  NQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALL 127

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
            GK IH   ++        V    +L+DMY+KC N   +  +F+++ +  ++SWT +I G
Sbjct: 128 FGKEIHGFSIKKMFHPLTNVH--NSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRG 185

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
            I  +   E  + F+ M        E  +  LI+        + G   H ++L+NG    
Sbjct: 186 CIENDCPREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKNGLLAF 245

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           +++  AL+ MY K  E+ SA  +FD +  KD + W+A+IS +A +     A E F  M+ 
Sbjct: 246 VSIGTALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQS 305

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
           +  RPNE+T V LL  C+  GA E+G+ +  +  K G   +  L +AL+D+Y K G +N 
Sbjct: 306 TDERPNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQ 365

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
              +F+E   +D+  W++M+ GYG++GCG+EAL  F +M   GVKPN + FI +L+ACSH
Sbjct: 366 GRAIFNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSH 425

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
            GL  EG S F  M    G++PK+ HY CMVDL+ R G ++ A + +  MP+ P+  +WG
Sbjct: 426 CGLEHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWG 485

Query: 550 ALLAASK-LHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
           ALLA  +  H +  + E+ A +++ ++PQN  Y V++SN+YA   RW DV  +R+++ E 
Sbjct: 486 ALLAGCRSTHGSIEIAELVAERLIGLDPQNTSYYVILSNLYAEQGRWGDVERLRKLVDEK 545

Query: 609 RVKKEPGFSSV 619
            +KKE G+  +
Sbjct: 546 GLKKEMGYKPL 556



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 243/457 (53%), Gaps = 9/457 (1%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           I  L  ++++V++ +K+ +   A  I+  M+ +G E ++ +I +IL ACA V     GKE
Sbjct: 72  IKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGALLFGKE 131

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IHGF+IK        V N+L+ MY++C +  ++  +FD++  +D++SW+T+IRG      
Sbjct: 132 IHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGCIENDC 191

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
           P EA +    M+F      E  +  ++       +   G A H  +++N       V+I 
Sbjct: 192 PREAFKAFSRMQFSCFGADETIVQDLIVAIIQADEHKFGIAFHGFLLKN--GLLAFVSIG 249

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           TAL+ MY+K G L  A  +F++LN+   +SW+ MIS +         +  F +M   +  
Sbjct: 250 TALLQMYAKFGELESAIIVFDQLNKKDYISWSAMISVHAHSRHPYNALETFKQMQSTDER 309

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P+EIT +SL+  C  +G  +LG+ + A+  + G+  +  +++AL+D+Y K   I   R +
Sbjct: 310 PNEITFVSLLQACSLIGAQELGESIQAHATKAGYLSNAFLSSALIDLYCKFGRINQGRAI 369

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ + +KD++ W+++I+ Y    C D+A E F +M    V+PNEV  + +LS C+  G L
Sbjct: 370 FNEIPTKDLVCWSSMINGYGLNGCGDEALETFSNMLACGVKPNEVVFISVLSACSHCG-L 428

Query: 393 EMGKW--LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMM 449
           E   W    +  +K G+   +     +VD+ ++ G++ GA +  ++  +  D  +W A++
Sbjct: 429 EHEGWSCFSSMEQKYGIIPKLPHYACMVDLISRRGNIEGALQFVNKMPMEPDKRIWGALL 488

Query: 450 AG-YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
           AG    HG  E A +  V     G+ P   ++  +L+
Sbjct: 489 AGCRSTHGSIEIAEL--VAERLIGLDPQNTSYYVILS 523



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/293 (24%), Positives = 141/293 (48%), Gaps = 11/293 (3%)

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P+ +T+LS+I     +G   + + +   +++ GFE  +++A AL+  Y    ++     +
Sbjct: 8   PNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSD-YDMGIVWKI 66

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+    KD+++W+A++SA  ++    +AFE+F  M+   V PN V++V +L  C   GAL
Sbjct: 67  FNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPACANVGAL 126

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
             GK +H +  K+       +  +LVDMYAKC +   +  +F + + +D+  W  ++ G 
Sbjct: 127 LFGKEIHGFSIKKMFHPLTNVHNSLVDMYAKCRNFKASMLVFDQILEKDLISWTTIIRGC 186

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----G 508
             + C  EA   F  M+ S    +      L+ A     ++   +  F    HG     G
Sbjct: 187 IENDCPREAFKAFSRMQFSCFGADETIVQDLIVA-----IIQADEHKFGIAFHGFLLKNG 241

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
           L+  +     ++ +  + G L+ A  +   +  + + I W A+++     ++P
Sbjct: 242 LLAFVSIGTALLQMYAKFGELESAIIVFDQLN-KKDYISWSAMISVHAHSRHP 293



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 97/190 (51%), Gaps = 11/190 (5%)

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           M +++ RPN VT++ ++   +  G  +M + +   + K G E +V + TAL+  Y+   D
Sbjct: 1   MLMTEQRPNHVTVLSVIRAISGLGLEDMMRVICGSVIKLGFESEVSVATALIGFYSDY-D 59

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           +   +++F++   +D+ +W+AM++     G   EA   F  M+  GV+PN ++ + +L A
Sbjct: 60  MGIVWKIFNQTPIKDLVLWSAMVSACVKSGQYGEAFEIFRAMQYDGVEPNHVSIVSILPA 119

Query: 487 CSHAGLVTEGKSV----FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
           C++ G +  GK +      KM H L  V     +  +VD+  +     +A  ++    L 
Sbjct: 120 CANVGALLFGKEIHGFSIKKMFHPLTNV-----HNSLVDMYAKCRNF-KASMLVFDQILE 173

Query: 543 PNMIVWGALL 552
            ++I W  ++
Sbjct: 174 KDLISWTTII 183


>gi|242051244|ref|XP_002463366.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
 gi|241926743|gb|EER99887.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
          Length = 745

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 211/598 (35%), Positives = 321/598 (53%), Gaps = 32/598 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           YN+++++      P  AL   A M + G    D  T    L   A     HL +++H  A
Sbjct: 118 YNTILSA---TPDPDDALAFAARMLRTGDVRPDAVTFTVTLSLAAGRGEAHLVRQLHALA 174

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
            + G+  D +V NAL+  YS  G + +AR +F+EMP RD+VSW+ ++ G  + G  E + 
Sbjct: 175 SRAGIATDVFVGNALVTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDG--ECSA 232

Query: 158 EVMREMRFM----DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV---- 209
           EV+R    M    D+RP  +++ S++        ++LG+ IH   V      KLGV    
Sbjct: 233 EVIRVFLRMLKQGDVRPDRISVCSVIPACGAEGKLELGRQIHGFAV------KLGVEGHV 286

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
           +IA  L+ MY KCG    A++LF  + +  V+SWT ++S      +  + V LF  M  +
Sbjct: 287 SIANVLVAMYYKCGTPGCARRLFEFMGERDVISWTTVMS-----MDGEDAVSLFNGMRRD 341

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            V P+E+T ++++         + G+ +HA  L+       A AN+L+ MY K R +  A
Sbjct: 342 GVAPNEVTFVAMLSSMPGDCPAREGQMIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDA 401

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT-- 387
           R +F  M   +++ WNA+IS YAQ      A E F+ M +  ++PNE T   +LS  T  
Sbjct: 402 RMIFSLMPHSEIIAWNALISGYAQNEMCQDALEAFLAM-MKIMKPNETTFASILSAVTAV 460

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
           E  ++  G+  H    K GL     +  AL+DMYAK G +  +++ F E ++R +  W A
Sbjct: 461 ETVSMAYGQMYHCQALKLGLGASEYVSGALIDMYAKRGSLEESWKAFGETVHRSLIAWTA 520

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV--H 505
           +++    HG  +  +  F DM  SGV P+G+  + +L AC ++G V+ G+ +FD M   H
Sbjct: 521 IISANSKHGNYDAVVSLFNDMVGSGVAPDGVVLLSVLTACRYSGFVSLGREIFDSMAAKH 580

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
           G  L P  EHY C+VD+LGRAG L+EA E++  MP  P++    +LL A ++H N  +GE
Sbjct: 581 GAELWP--EHYACVVDMLGRAGRLEEAEELMLQMPSGPSVSALQSLLGACRIHGNTDVGE 638

Query: 566 IAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
             A+ + E EP   G  VL+SNIYA    W  VA VRR M+E  VKKE GFS V+  G
Sbjct: 639 RVASVLTETEPTESGAYVLLSNIYAEKGDWGAVARVRRQMRERGVKKEVGFSWVDAGG 696



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 141/475 (29%), Positives = 237/475 (49%), Gaps = 22/475 (4%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
            H  A+ +GL   A V+N+L   Y++  S  +A  +F    +RD  S++T++        
Sbjct: 71  FHALAVASGLAAFAPVTNSLAARYAKGNSFPAAARVFAAARSRDTRSYNTILSATPD--- 127

Query: 153 PEEALE-VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
           P++AL    R +R  D+RP  V     +SL A   +  L + +HA   R        V +
Sbjct: 128 PDDALAFAARMLRTGDVRPDAVTFTVTLSLAAGRGEAHLVRQLHALASR--AGIATDVFV 185

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-EGVRLFAEMIEE- 269
             AL+  YS+ G +  A+++F  +    +VSW  ++ G  +  E + E +R+F  M+++ 
Sbjct: 186 GNALVTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDGECSAEVIRVFLRMLKQG 245

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
           +V P  I++ S+I  CG  G L+LG+ +H + ++ G E  +++AN LV MY KC     A
Sbjct: 246 DVRPDRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSIANVLVAMYYKCGTPGCA 305

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           R LF+ M  +DV+ W  V+S   +      A  LF  M+   V PNEVT V +LS     
Sbjct: 306 RRLFEFMGERDVISWTTVMSMDGE-----DAVSLFNGMRRDGVAPNEVTFVAMLSSMPGD 360

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
                G+ +H    K  L        +L+ MYAK   ++ A  +FS   + +I  WNA++
Sbjct: 361 CPAREGQMIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDARMIFSLMPHSEIIAWNALI 420

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH---- 505
           +GY  +   ++AL  F+ M +  +KPN  TF  +L+A +    V+     + +M H    
Sbjct: 421 SGYAQNEMCQDALEAFLAMMKI-MKPNETTFASILSAVTAVETVS---MAYGQMYHCQAL 476

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
            LGL       G ++D+  + G L+E+ +       R ++I W A+++A+  H N
Sbjct: 477 KLGLGASEYVSGALIDMYAKRGSLEESWKAFGETVHR-SLIAWTAIISANSKHGN 530


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 199/568 (35%), Positives = 310/568 (54%), Gaps = 13/568 (2%)

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDG-DAYVSNALIQMYSECGSLVSARYLFDEM 132
           + ++L++C +      G+ +H   + +G      +++N LI MYS C  L SA  LF  M
Sbjct: 173 LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 232

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           P R+ VSW+T++ G  +  +  +AL     MR   + P+  A+ S     A +      +
Sbjct: 233 PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRAR 292

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
           +  A        E   + +A+ L DMYSKCG L+ A ++F+++ Q   V+WT MI GY +
Sbjct: 293 SCTASASVGFDTE---LFVASNLADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAK 349

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ---LGKWLHAYILRNGFEFS 309
              +   V  F +M  E +  ++  +   ++     GGL+   L K +H  + + GFE  
Sbjct: 350 NGSLEAAVLSFRDMKREGLVGADQHVFCSVLSAS--GGLKDGWLSKSIHCCVTKAGFELE 407

Query: 310 LAMANALVDMYGKCREIRSA-RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
           +A+ NAL+DMY K  ++ SA R L       +V+   ++I  Y +  C+++A  +++ ++
Sbjct: 408 VAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELR 467

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
              V PNE T   ++  C     LE G  LH  + K  L  D  + + LVDMY KCG ++
Sbjct: 468 RQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLIS 527

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            + +LF+E  YR    WNA++  +  HG G EA+  F  M  SG++PN I F+ LL ACS
Sbjct: 528 LSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTACS 587

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           HAGLV EG   F  M    G+ PK EHY C++D  GRAG LDEA++ I  MP++PN   W
Sbjct: 588 HAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYGW 647

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
            +LL A ++  +  +GE+AA  ++++EP N G +V +S IYA   +W DV  VR++M++ 
Sbjct: 648 CSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRDS 707

Query: 609 RVKKEPGFSSVEVNGLVHKFIRGGMVNW 636
           R+KK PGFS V+ N   H F   G  +W
Sbjct: 708 RIKKLPGFSWVDSNKKTHVF---GSEDW 732



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 141/536 (26%), Positives = 239/536 (44%), Gaps = 67/536 (12%)

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDG-DAYVSNALIQMYSECGSLVSARYLFDEM 132
           + ++L++C +      G+ +H   + +G      +++N LI MYS C  L SA  LF  M
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM 82

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSE-------------------- 172
           P R+ VSW+T++ G  +  +  +AL     MR   + P+                     
Sbjct: 83  PRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAAS 142

Query: 173 ----------------------------VAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
                                       V + S++       D+  G+ +HA +V +   
Sbjct: 143 HCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLS-GA 201

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
                 +A  LI MYS C +LA A +LF  + + + VSWT ++SG  +     + +  FA
Sbjct: 202 AAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFA 261

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
            M    V P+   + S       +G     +   A     GF+  L +A+ L DMY KC 
Sbjct: 262 AMRRAGVAPTRFALSSAARAAAALGAPLRARSCTASA-SVGFDTELFVASNLADMYSKCG 320

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            +  A  +FD M  KD + W A+I  YA+   ++ A   F  MK   +   +  +    S
Sbjct: 321 LLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHV--FCS 378

Query: 385 LCTEAGALEMG---KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           + + +G L+ G   K +H  + K G E++V ++ AL+DMYAK  DV  A R+       D
Sbjct: 379 VLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKI----D 434

Query: 442 ICMWN-----AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
              WN     +M+ GY    C EEAL+ +V++ R GV+PN  TF  ++  C+   L+ +G
Sbjct: 435 PGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQG 494

Query: 497 KSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
             +  +++    L+        +VD+ G+ GL+  + ++   +  R + I W A++
Sbjct: 495 AQLHAQVIK-TDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTD-IAWNAVI 548



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 164/360 (45%), Gaps = 37/360 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNG-SEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           + +++  Y KN    +A+  +  M++ G    D     ++L A   +    L K IH   
Sbjct: 340 WTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCV 399

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR-DVVSWSTMIRGYHRGGLPEEA 156
            K G + +  V NALI MY++   + SA  +    P   +VVS ++MI GY      EEA
Sbjct: 400 TKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEA 459

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           L +  E+R   + P+E    SM+   A  A ++ G  +HA V++   D      + + L+
Sbjct: 460 LVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKT--DLIRDSFVGSTLV 517

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           DMY KCG ++ + QLFN +   + ++W  +I+ + +     E ++ F  MI   + P+ I
Sbjct: 518 DMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHI 577

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
             +SL+  C            HA ++  G ++  +M  A                   G+
Sbjct: 578 AFVSLLTACS-----------HAGLVDEGLKYFYSMKEA------------------HGI 608

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           + K+   ++ +I  Y +A  +D+A++    M    ++PN      LL  C   G+ E+G+
Sbjct: 609 EPKEEH-YSCIIDTYGRAGRLDEAYKFISEM---PIKPNAYGWCSLLGACRMRGSKELGE 664



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 157/370 (42%), Gaps = 55/370 (14%)

Query: 170 PSEVAMISMVSLFAD---VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLA 226
           P+    + + SL        D+  G+ +HA +V +         +A  LI MYS C +LA
Sbjct: 15  PAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLS-GAAAASTFLANHLITMYSHCADLA 73

Query: 227 YAKQLFNRLNQNSVVSWTVMISGY------------------------------------ 250
            A +LF  + + + VSWT ++SG                                     
Sbjct: 74  SALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTL 133

Query: 251 -----IRCNEINEG----VRLFAEMIEENVFPSEITIL---SLIIECGFVGGLQLGKWLH 298
                +  +  + G    V+ + + +     P+  T +   SL+  CG  G L+ G+ LH
Sbjct: 134 GPKHTLAASHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLH 193

Query: 299 AYILRNG-FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           A ++ +G    S  +AN L+ MY  C ++ SA  LF  M  ++ + W  ++S  +Q    
Sbjct: 194 ARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMH 253

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
             A   F  M+ + V P    +          GA    +   T     G + ++ + + L
Sbjct: 254 ADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSC-TASASVGFDTELFVASNL 312

Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG-VKPN 476
            DMY+KCG ++ A R+F +   +D   W AM+ GY  +G  E A++ F DM+R G V  +
Sbjct: 313 ADMYSKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGAD 372

Query: 477 GITFIGLLNA 486
              F  +L+A
Sbjct: 373 QHVFCSVLSA 382


>gi|116831059|gb|ABK28484.1| unknown [Arabidopsis thaliana]
          Length = 583

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 193/570 (33%), Positives = 316/570 (55%), Gaps = 9/570 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+  Y +N     A  ++  M + G      T+  +L  C Q      G+ +HG A 
Sbjct: 9   WNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAA 68

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+GL+ D+ V NALI  YS+C  L SA  LF EM ++  VSW+TMI  Y + GL EEA+ 
Sbjct: 69  KSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAIT 128

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V + M   ++  S V +I+++S  A V+   L   +  C + N       +++ T+L+  
Sbjct: 129 VFKNMFEKNVEISPVTIINLLS--AHVSHEPLHCLVVKCGMVN------DISVVTSLVCA 180

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YS+CG L  A++L+    Q+S+V  T ++S Y    +++  V  F++  +  +    + +
Sbjct: 181 YSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVAL 240

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           + ++  C     + +G  LH Y +++G      + N L+ MY K  ++ +   LF+ ++ 
Sbjct: 241 VGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE 300

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMGKW 397
             ++ WN+VIS   Q+     AFE+F  M ++  + P+ +T+  LL+ C++   L +GK 
Sbjct: 301 TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE 360

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH Y  +   E +  + TAL+DMYAKCG+   A  +F          WN+M++GY + G 
Sbjct: 361 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 420

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
              AL  +++M   G+KP+ ITF+G+L+AC+H G V EGK  F  M+   G+ P ++HY 
Sbjct: 421 QHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYA 480

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
            MV LLGRA L  EA  +I  M ++P+  VWGALL+A  +H+   +GE  A ++  ++ +
Sbjct: 481 LMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYK 540

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
           N G  VLMSN+YA    W+DV  VR +MK+
Sbjct: 541 NGGLYVLMSNLYATEAMWDDVVRVRNMMKD 570



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 198/431 (45%), Gaps = 19/431 (4%)

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           MP RD V W+ +I GY R G   +A ++   M      PS   +++++        V  G
Sbjct: 1   MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           +++H    ++    +L   +  ALI  YSKC  L  A+ LF  +   S VSW  MI  Y 
Sbjct: 61  RSVHGVAAKS--GLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYS 118

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +     E + +F  M E+NV  S +TI++L+            + LH  +++ G    ++
Sbjct: 119 QSGLQEEAITVFKNMFEKNVEISPVTIINLL------SAHVSHEPLHCLVVKCGMVNDIS 172

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           +  +LV  Y +C  + SA  L+   K   ++   +++S YA+   +D A   F   +   
Sbjct: 173 VVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLC 232

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           ++ + V +VG+L  C ++  +++G  LH Y  K GL    ++   L+ MY+K  DV    
Sbjct: 233 MKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVL 292

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEAL-IFFVDMERSGVKPNGITFIGLLNACSHA 490
            LF +     +  WN++++G    G    A  +F   M   G+ P+ IT   LL  CS  
Sbjct: 293 FLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQL 352

Query: 491 GLVTEGKSVFDKMVHGLGLVPKI--EHYGC--MVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
             +  GK      +HG  L      E++ C  ++D+  + G   +A  + KS+   P   
Sbjct: 353 CCLNLGKE-----LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTA 406

Query: 547 VWGALLAASKL 557
            W ++++   L
Sbjct: 407 TWNSMISGYSL 417



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 89/160 (55%), Gaps = 1/160 (0%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTHLGKE 92
            PL  +NS+++  +++ + S+A  ++  M   G  + D  TI ++L  C+Q+   +LGKE
Sbjct: 301 TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE 360

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HG+ ++N  + + +V  ALI MY++CG+ V A  +F  +      +W++MI GY   GL
Sbjct: 361 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 420

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
              AL    EMR   ++P E+  + ++S       VD GK
Sbjct: 421 QHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGK 460


>gi|125529041|gb|EAY77155.1| hypothetical protein OsI_05121 [Oryza sativa Indica Group]
          Length = 916

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 196/586 (33%), Positives = 332/586 (56%), Gaps = 9/586 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++   ++N++ + A+ ++  MR   ++ D  T+ TI+ AC    +   GKE+HG
Sbjct: 333 LVTWNAMIKGLVENDRVNEAMCMFQEMRSK-NQPDVATLVTIISACGDRGLLPEGKEVHG 391

Query: 96  FAIKNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG-GLP 153
           + IK G +  +  V N+L+ +Y +C    +AR LF  MP RD++SW+TMI GY R   L 
Sbjct: 392 YIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLG 451

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           EEA  + + +    +  +   +++++       D++ GK++H+ +++       GV+ A 
Sbjct: 452 EEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILK--YGFLTGVSAAN 509

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNS-VVSWTVMISGYIRCNEINEGVRLFAEMIEE-NV 271
           +LI MY  CG+   A  L   +   S ++SW   I G ++     + +  F  M     +
Sbjct: 510 SLIHMYICCGDSLAAFSLLESITPMSDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLTL 569

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P  IT++S++  CG +    LGK +H   L+   EF+L + NAL+ MY +  +  SA  
Sbjct: 570 NPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFGDTESAEL 629

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +F  +  +++  WN +IS +AQ +   +A + +   K+    PNE+++VG++  CT+ G 
Sbjct: 630 IFSSLVGRNLCSWNCMISGFAQNNEGLRALQFY--KKMEYFEPNEISIVGIICACTQLGD 687

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L  GK +H ++ + GL+ +V +  +LVDMY+KCG ++ + R+F  +  + I  WN+M++ 
Sbjct: 688 LRQGKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIACWNSMISA 747

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           +G HG G +++  F  M  SGVK    TFI LL+ACSH+GL  EG   +  M+   G++P
Sbjct: 748 FGFHGLGLKSIEIFWKMNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHLMIEHFGIIP 807

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
             EH+ C+VD+LGRAG L EAH+ ++S+P +    VWGALL+A        M E  A  +
Sbjct: 808 TPEHHVCVVDMLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMCESVAKHL 867

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
           L +EP+N GY V MSN+YA  + W+    VR ++++  + K  G S
Sbjct: 868 LCLEPENSGYYVTMSNLYAYQDMWSGAVQVRDILQDKGLMKPRGRS 913



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 144/527 (27%), Positives = 262/527 (49%), Gaps = 17/527 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+ +++   N +   A+ ++ +M       D+ ++  +L   ++      G   HG
Sbjct: 129 LILWNAAISALTLNCRYGDAVVLFRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHG 188

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+K  LD D  + N L+ MY++CG   S+  +F  MP RD  SW++M+ G    GL E 
Sbjct: 189 MALKRRLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEI 248

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADV-DLGKAIHACVVRNCKDEKLGVAIATA 214
           +    +EM     +  EV++  ++S  + + D+   G+++H+ V++    E    ++  +
Sbjct: 249 SAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVIK-LGYEDTTSSVENS 307

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LI  Y + G    A+++F   +  ++V+W  MI G +  + +NE + +F EM  +N  P 
Sbjct: 308 LITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKNQ-PD 366

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEF-SLAMANALVDMYGKCREIRSARTLF 333
             T++++I  CG  G L  GK +H YI++ G  +   ++ N+L+D+Y KC +  +AR LF
Sbjct: 367 VATLVTIISACGDRGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILF 426

Query: 334 DGMKSKDVMIWNAVISAYAQAHCI-DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
             M  +D++ WN +IS Y++   + ++A  +F  +    +     T+V ++  C     L
Sbjct: 427 RTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDL 486

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAG 451
             GK +H++I K G    V    +L+ MY  CGD   A+ L  S     DI  WN  + G
Sbjct: 487 NFGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPMSDIISWNTAIVG 546

Query: 452 YGMHGCGEEALIFFVDMERS-GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
              +G   +AL  F  M  +  + P+ IT + +L+ C +  L + GKS     +H + L 
Sbjct: 547 CVQNGLYGDALEAFQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKS-----IHCMALK 601

Query: 511 PKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
             IE        ++ +  R G  + A E+I S  +  N+  W  +++
Sbjct: 602 RLIEFNLRVKNALLTMYFRFGDTESA-ELIFSSLVGRNLCSWNCMIS 647



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 219/460 (47%), Gaps = 8/460 (1%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H  A+K+    D  V  ++I  YS    + SA  +FDE    D++ W+  I        
Sbjct: 85  LHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
             +A+ + R M  +       +M+ M+S  +    ++ G A H   ++   D  L  ++ 
Sbjct: 145 YGDAVVLFRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDL--SLW 202

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
             L+DMY+KCG+   ++ +F R+      SW  M+SG +           F EM+  +  
Sbjct: 203 NTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQ 262

Query: 273 PSEITILSLIIECGFVGGL-QLGKWLHAYILRNGFEFSL-AMANALVDMYGKCREIRSAR 330
             E+++  ++  C  +  L   G+ +H+ +++ G+E +  ++ N+L+  Y +     +A 
Sbjct: 263 ADEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAE 322

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +F    +K+++ WNA+I    +   +++A  +F  M+ SK +P+  T+V ++S C + G
Sbjct: 323 EVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMR-SKNQPDVATLVTIISACGDRG 381

Query: 391 ALEMGKWLHTYIEKQG-LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            L  GK +H YI K+G +  +  +  +L+D+Y KC D + A  LF     RD+  WN M+
Sbjct: 382 LLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMI 441

Query: 450 AGYGMH-GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +GY  +   GEEA   F  +   G+     T + ++ +C     +  GKSV    +   G
Sbjct: 442 SGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSV-HSFILKYG 500

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
            +  +     ++ +    G    A  +++S+    ++I W
Sbjct: 501 FLTGVSAANSLIHMYICCGDSLAAFSLLESITPMSDIISW 540



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 8/260 (3%)

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           LH   L++       +  +++  Y + R++ SA  +FD   + D+++WNA ISA      
Sbjct: 85  LHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
              A  LF  M       +  +MV +LS  + A +LE G   H    K+ L+ D+ L   
Sbjct: 145 YGDAVVLFRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLWNT 204

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           L+DMYAKCGD   +  +F    YRD   WN+M++G   +G  E +  +F +M RS  + +
Sbjct: 205 LMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQAD 264

Query: 477 GITFIGLLNACSH-AGLVTEGKSVFDKMVHGLG---LVPKIEHYGCMVDLLGRAGLLDEA 532
            ++   +L+ACSH   L + G+SV   ++  LG       +E+   ++      G  + A
Sbjct: 265 EVSLSCVLSACSHLKDLFSFGESVHSSVIK-LGYEDTTSSVEN--SLITFYYELGFPEAA 321

Query: 533 HEMIKSMPLRPNMIVWGALL 552
            E+  S     N++ W A++
Sbjct: 322 EEVFLSTS-NKNLVTWNAMI 340


>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
          Length = 700

 Score =  350 bits (898), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 197/584 (33%), Positives = 321/584 (54%), Gaps = 7/584 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +N+++   +   + S AL ++  M  +GS  VD FT P ++KACA +     G+++    
Sbjct: 117 WNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMV 176

Query: 98  IKNGLDGDA----YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
             +   G+A    +V  AL+ M+++CG L  AR +F+ M  RD+ +W+ MI G    G  
Sbjct: 177 EADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNW 236

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            E +++   MR        +   +++S      ++ +G A+H C V++       + ++ 
Sbjct: 237 LEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGD--IYVSN 294

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMY KCG +  A  LF   N   VVSW+ +I GY +    N  V LF EMI   + P
Sbjct: 295 ALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINP 354

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +  T+ S++     +  ++ GK +H + +R+G E S  + +AL+D+Y K   IR A T+F
Sbjct: 355 NSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIF 414

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
                KD+ IWN++++ YA     D AF     ++   ++P+ VT+V +L LC +   L 
Sbjct: 415 WLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLI 474

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            GK LH Y+ K  +     +  AL+DMY KCG +  A  +F     R+   +N +++ +G
Sbjct: 475 QGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFG 534

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            H   ++AL FF  M+R G+ P+ +TF+ LL+ CSHAGL+ +G  ++  M+H   + P+ 
Sbjct: 535 KHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEK 594

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHY C+VDL  R G LDEA   + +M   P + V G LLAA ++H    + E+   +I E
Sbjct: 595 EHYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFE 654

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
             P + GY++L+SNIYA A  W+DV  +R +++E  +KKE G S
Sbjct: 655 QNPNDPGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKETGNS 698



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 211/404 (52%), Gaps = 3/404 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  + +++   + +      ++++  MR  G  VD+    T++ AC +     +G  
Sbjct: 217 VRDLAAWTAMIGGTVHSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTA 276

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HG A+K+G  GD YVSNAL+ MY +CG +  A  LF    ++DVVSWS++I GY + G+
Sbjct: 277 LHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGM 336

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
              ++ +  EM  + I P+   + S++   + +  +  GK IH   +R+  +    V   
Sbjct: 337 HNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFV--V 394

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           +ALID+YSK G +  A+ +F       +  W  M++GY      +        + +  + 
Sbjct: 395 SALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLK 454

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P  +T++S++  C     L  GK LHAY+++       ++ NAL+DMY KC  +  A+ +
Sbjct: 455 PDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEV 514

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F  M  ++ + +N +IS++ + +  D+A   F  MK   + P++VT V LLS C+ AG +
Sbjct: 515 FQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLI 574

Query: 393 EMGKWL-HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
           + G  L H+ +    +  +    + +VD+Y++CG ++ A+   S
Sbjct: 575 DKGLHLYHSMLHDYNISPEKEHYSCIVDLYSRCGKLDEAWCFMS 618



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 237/479 (49%), Gaps = 15/479 (3%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
            + +H   +  G      +   L++ Y++ G +  A  +FD MP R+  +W+ +I+G   
Sbjct: 67  ARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRRNSFAWNAVIKGLVD 126

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAM-----ISMVSLFADVADVDLGKAIHACVVRNCK- 203
            G   EALE+   M    +    VA+       ++   A +  V  G+ +   V  +   
Sbjct: 127 AGRFSEALEMFWGM----VNDGSVAVDGFTYPPVIKACAALGAVAQGRKVWEMVEADIAS 182

Query: 204 -DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
            + +  V +  AL+DM++KCG L  A+ +F  +    + +WT MI G +      E V L
Sbjct: 183 GNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEVVDL 242

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F  M  E      +   ++I  CG  G LQ+G  LH   +++G    + ++NALVDMY K
Sbjct: 243 FNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDMYCK 302

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C  +  A  LF    SKDV+ W+++I  Y+Q    + +  LF  M    + PN  T+  +
Sbjct: 303 CGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTLASI 362

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           L   +    +  GK +H +  + GLE    + +AL+D+Y+K G +  A  +F   + +D+
Sbjct: 363 LPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDL 422

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
            +WN+M+AGY ++G  + A      +++ G+KP+ +T + +L  C+   ++ +GK +   
Sbjct: 423 AIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAY 482

Query: 503 MV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
           ++ + +  V  + +   ++D+  + G L+ A E+ + M  R N + +  L+++   H +
Sbjct: 483 VIKYCINSVCSVNN--ALLDMYCKCGFLEVAKEVFQLMTER-NTVTYNILISSFGKHNH 538



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/278 (25%), Positives = 121/278 (43%), Gaps = 7/278 (2%)

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           SL++        Q  + LHA +L  G      +   LV  Y K  ++  A  +FDGM  +
Sbjct: 53  SLLLRLQSCPDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRVFDGMPRR 112

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +   WNAVI     A    +A E+F  M     V  +  T   ++  C   GA+  G+ +
Sbjct: 113 NSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRKV 172

Query: 399 HTYIEKQ----GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
              +E          +V ++ ALVDM+AKCG ++ A  +F     RD+  W AM+ G   
Sbjct: 173 WEMVEADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVH 232

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
            G   E +  F  M   G   + +    +++AC  AG +  G ++    V   G    I 
Sbjct: 233 SGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKS-GASGDIY 291

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
               +VD+  + G ++ A  +  S   + +++ W +L+
Sbjct: 292 VSNALVDMYCKCGCVEMADCLFWSTNSK-DVVSWSSLI 328


>gi|302764012|ref|XP_002965427.1| hypothetical protein SELMODRAFT_84339 [Selaginella moellendorffii]
 gi|300166241|gb|EFJ32847.1| hypothetical protein SELMODRAFT_84339 [Selaginella moellendorffii]
          Length = 495

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 178/492 (36%), Positives = 290/492 (58%), Gaps = 4/492 (0%)

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
            GL    +V N+L+ MY +CG +  AR  F+ M +R+V+SWSTM+  Y + G  ++AL +
Sbjct: 4   TGLCCGEFVGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVL 63

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
            ++M    + P+EV  +S++   A+   V+ G+ IH    R   D  +G+ + TAL+ MY
Sbjct: 64  FQKMEEEGVEPNEVTFLSVLDACANAEAVEQGEMIHRLAARKKLD--VGLIVGTALVGMY 121

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            KC  L  A+Q+F+ + +  VV+W+ MIS Y +   + E ++LF  M  + V P+EI ++
Sbjct: 122 GKCSRLIEARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILM 181

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           S++  C   G L  GK  H  ++  GF   ++  N L+ MYGKC ++ SA+ +F GM+ +
Sbjct: 182 SILGACSSAGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERR 241

Query: 340 DVMIWNAVISAYAQ-AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           D++ W+A+++  A+  HC D AF  F  M +  V+P+ VT V LL  C+  GAL  G  +
Sbjct: 242 DLISWSAMLAVIAEHGHCKD-AFVHFRRMDLEGVKPDYVTFVSLLDACSLLGALVEGNVI 300

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           HT I  +G +  + ++ +L+DMY KCG +  A  +F    +R++  W  M+     H  G
Sbjct: 301 HTRIRAEGFQSVMYIENSLIDMYGKCGSLQAARGIFDRMSHRNVITWTTMITACVQHEQG 360

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +EAL  F +ME++GV+P+ + F+ ++++CSH+GLV EG+  F KMV      P +EH+  
Sbjct: 361 KEALELFEEMEKAGVQPDQVAFLSIIHSCSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVG 420

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           M+DLLGR+G L+EA E+++ MP+ P ++ W  LL+A K H +       A  +L + P +
Sbjct: 421 MLDLLGRSGKLNEAEELMEFMPVEPGVVGWNTLLSACKTHNDTERAGRVAGGMLVLGPGH 480

Query: 579 YGYNVLMSNIYA 590
            G  V  SNI +
Sbjct: 481 AGPYVSFSNILS 492



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 231/459 (50%), Gaps = 22/459 (4%)

Query: 28  SYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           ++ N+I+    ++++V +Y +      AL ++  M + G E +  T  ++L ACA     
Sbjct: 37  THRNVIS----WSTMVAAYAQRGDHDQALVLFQKMEEEGVEPNEVTFLSVLDACANAEAV 92

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
             G+ IH  A +  LD    V  AL+ MY +C  L+ AR +FD +  +DVV+WSTMI  Y
Sbjct: 93  EQGEMIHRLAARKKLDVGLIVGTALVGMYGKCSRLIEARQVFDGIVEKDVVTWSTMISAY 152

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
            + G   EA+++   M    +RP+E+ ++S++   +    +  GK  H  VV  C     
Sbjct: 153 AQLGHVREAIQLFGYMNLDGVRPNEIILMSILGACSSAGALAEGKMTHELVVI-C---GF 208

Query: 208 GVAIATA--LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           G  ++T   LI MY KCG+LA AK +F  + +  ++SW+ M++         +    F  
Sbjct: 209 GADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLISWSAMLAVIAEHGHCKDAFVHFRR 268

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M  E V P  +T +SL+  C  +G L  G  +H  I   GF+  + + N+L+DMYGKC  
Sbjct: 269 MDLEGVKPDYVTFVSLLDACSLLGALVEGNVIHTRIRAEGFQSVMYIENSLIDMYGKCGS 328

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           +++AR +FD M  ++V+ W  +I+A  Q     +A ELF  M+ + V+P++V  + ++  
Sbjct: 329 LQAARGIFDRMSHRNVITWTTMITACVQHEQGKEALELFEEMEKAGVQPDQVAFLSIIHS 388

Query: 386 CTEAGALEMGK-WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS-EAIYRDIC 443
           C+ +G +E G+ +    +E Q     V     ++D+  + G +N A  L     +   + 
Sbjct: 389 CSHSGLVEEGRIYFLKMVEDQSFTPGVEHFVGMLDLLGRSGKLNEAEELMEFMPVEPGVV 448

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
            WN +++    H           D ER+G    G+  +G
Sbjct: 449 GWNTLLSACKTHN----------DTERAGRVAGGMLVLG 477


>gi|4544411|gb|AAD22320.1| hypothetical protein [Arabidopsis thaliana]
 gi|91806147|gb|ABE65802.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 582

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 193/570 (33%), Positives = 316/570 (55%), Gaps = 9/570 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+  Y +N     A  ++  M + G      T+  +L  C Q      G+ +HG A 
Sbjct: 9   WNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAA 68

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+GL+ D+ V NALI  YS+C  L SA  LF EM ++  VSW+TMI  Y + GL EEA+ 
Sbjct: 69  KSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAIT 128

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V + M   ++  S V +I+++S  A V+   L   +  C + N       +++ T+L+  
Sbjct: 129 VFKNMFEKNVEISPVTIINLLS--AHVSHEPLHCLVVKCGMVN------DISVVTSLVCA 180

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YS+CG L  A++L+    Q+S+V  T ++S Y    +++  V  F++  +  +    + +
Sbjct: 181 YSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVAL 240

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           + ++  C     + +G  LH Y +++G      + N L+ MY K  ++ +   LF+ ++ 
Sbjct: 241 VGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE 300

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMGKW 397
             ++ WN+VIS   Q+     AFE+F  M ++  + P+ +T+  LL+ C++   L +GK 
Sbjct: 301 TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE 360

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH Y  +   E +  + TAL+DMYAKCG+   A  +F          WN+M++GY + G 
Sbjct: 361 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 420

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
              AL  +++M   G+KP+ ITF+G+L+AC+H G V EGK  F  M+   G+ P ++HY 
Sbjct: 421 QHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYA 480

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
            MV LLGRA L  EA  +I  M ++P+  VWGALL+A  +H+   +GE  A ++  ++ +
Sbjct: 481 LMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYK 540

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
           N G  VLMSN+YA    W+DV  VR +MK+
Sbjct: 541 NGGLYVLMSNLYATEAMWDDVVRVRNMMKD 570



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 198/431 (45%), Gaps = 19/431 (4%)

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           MP RD V W+ +I GY R G   +A ++   M      PS   +++++        V  G
Sbjct: 1   MPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 60

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           +++H    ++    +L   +  ALI  YSKC  L  A+ LF  +   S VSW  MI  Y 
Sbjct: 61  RSVHGVAAKS--GLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYS 118

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +     E + +F  M E+NV  S +TI++L+            + LH  +++ G    ++
Sbjct: 119 QSGLQEEAITVFKNMFEKNVEISPVTIINLL------SAHVSHEPLHCLVVKCGMVNDIS 172

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           +  +LV  Y +C  + SA  L+   K   ++   +++S YA+   +D A   F   +   
Sbjct: 173 VVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLC 232

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           ++ + V +VG+L  C ++  +++G  LH Y  K GL    ++   L+ MY+K  DV    
Sbjct: 233 MKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVL 292

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEAL-IFFVDMERSGVKPNGITFIGLLNACSHA 490
            LF +     +  WN++++G    G    A  +F   M   G+ P+ IT   LL  CS  
Sbjct: 293 FLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQL 352

Query: 491 GLVTEGKSVFDKMVHGLGLVPKI--EHYGC--MVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
             +  GK      +HG  L      E++ C  ++D+  + G   +A  + KS+   P   
Sbjct: 353 CCLNLGKE-----LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTA 406

Query: 547 VWGALLAASKL 557
            W ++++   L
Sbjct: 407 TWNSMISGYSL 417



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 89/160 (55%), Gaps = 1/160 (0%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTHLGKE 92
            PL  +NS+++  +++ + S+A  ++  M   G  + D  TI ++L  C+Q+   +LGKE
Sbjct: 301 TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE 360

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HG+ ++N  + + +V  ALI MY++CG+ V A  +F  +      +W++MI GY   GL
Sbjct: 361 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 420

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
              AL    EMR   ++P E+  + ++S       VD GK
Sbjct: 421 QHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGK 460


>gi|449523019|ref|XP_004168522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 191/565 (33%), Positives = 327/565 (57%), Gaps = 12/565 (2%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR- 135
           +++A  ++ +   G   HG+  ++G      V N+L+ +Y+E   +  A  LF EM  R 
Sbjct: 154 VIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAYKLFGEMSVRN 212

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           DVVSWS MI G+ + G  E+   + R M     I P  V ++S++    ++ D+ LG  +
Sbjct: 213 DVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMV 272

Query: 195 HACVV-RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           H  V+ R  +D+   + +  +LIDMYSKC N+  A + F  + + +++SW +M+S YI  
Sbjct: 273 HGLVIFRGLEDD---LFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILN 329

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLI-IECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
               E + L   M+ E     E+T+ +++ I   F+  L+  + +H  I+R G+E +  +
Sbjct: 330 ESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKC-RSVHGVIIRKGYESNELL 388

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
            N+++D Y KC  +  AR +FDGM  KDV+ W+ +I+ +A+    D+A  +F  M   +V
Sbjct: 389 LNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQMN-EEV 447

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR 432
            PN V+++ L+  C  +  L   KW H    ++GL  +V + T+++DMY+KCGD+  + R
Sbjct: 448 IPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVAIGTSIIDMYSKCGDIEASIR 507

Query: 433 LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL 492
            F++   +++  W+AM++ + ++G   EAL+ F  ++++G KPN +T + LL+ACSH GL
Sbjct: 508 AFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGL 567

Query: 493 VTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP--LRPNMIVWGA 550
           + EG S F  MV   G+ P +EHY C+VD+L RAG  +EA E+I+ +P  +     +WG 
Sbjct: 568 IEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGT 627

Query: 551 LLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRV 610
           LL++ + + N S+G  AA+++L++EP +    +L SN+YA      D A +RR+ KE  V
Sbjct: 628 LLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLASNLYANCGLMIDSAKMRRLAKEKGV 687

Query: 611 KKEPGFSSVEVNGLVHKFIRGGMVN 635
           K   G+S V +N    +F+ G ++N
Sbjct: 688 KVVAGYSLVHINSQTWRFVAGDVLN 712



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/511 (27%), Positives = 264/511 (51%), Gaps = 18/511 (3%)

Query: 55  ALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALI 113
           AL +Y  +R +G+++ D + +P+ILKAC+     +LG  +HG  IK G      ++N+ I
Sbjct: 31  ALQLYHEIRISGAQLSDTWVLPSILKACSNTSF-NLGTAMHGCLIKQGCQSSTSIANSTI 89

Query: 114 QMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEV 173
             Y + G L SA+  FD   N+D VSW+ M+ G    G     L    + RF   +P+  
Sbjct: 90  DFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNIS 149

Query: 174 AMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFN 233
           +++ ++  F ++     G A H  + R+     L  ++  +L+ +Y++  ++ +A +LF 
Sbjct: 150 SLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAIL--SVQNSLLSLYAEV-HMYFAYKLFG 206

Query: 234 RLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPSEITILSLIIECGFVGGL 291
            ++ +N VVSW+VMI G+++  E  +G  +F  M+ E  + P  +T++S++  C  +  +
Sbjct: 207 EMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDI 266

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
            LG  +H  ++  G E  L + N+L+DMY KC  + SA   F  +  K+++ WN ++SAY
Sbjct: 267 SLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAY 326

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
                  +A  L   M       +EVT+  +L +          + +H  I ++G E + 
Sbjct: 327 ILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNE 386

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
           +L  +++D YAKC  V  A  +F     +D+  W+ M+AG+  +G  +EA+  F  M   
Sbjct: 387 LLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQMNEE 446

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAG 527
            V PN ++ + L+ AC+ +  + +      K  HG+    GL  ++     ++D+  + G
Sbjct: 447 -VIPNNVSIMNLMEACAVSAELRQ-----SKWAHGIAVRRGLASEVAIGTSIIDMYSKCG 500

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            ++ +      +P + N++ W A+++A +++
Sbjct: 501 DIEASIRAFNQIP-QKNVVCWSAMISAFRIN 530



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 231/438 (52%), Gaps = 9/438 (2%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYA 60
           + ++N  L+L        H+   +  F   ++ N +  ++ ++  +++  +      ++ 
Sbjct: 183 LSVQNSLLSL----YAEVHMYFAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFR 238

Query: 61  FM-RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSEC 119
            M  + G   D  T+ ++LKAC  +    LG  +HG  I  GL+ D +V N+LI MYS+C
Sbjct: 239 NMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKC 298

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV 179
            ++ SA   F E+P ++++SW+ M+  Y       EAL ++  M        EV + +++
Sbjct: 299 FNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVL 358

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
            +     D    +++H  ++R  K  +    +  ++ID Y+KC  +  A+ +F+ +N+  
Sbjct: 359 QIAKHFLDSLKCRSVHGVIIR--KGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKD 416

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
           VV+W+ MI+G+ R  + +E + +F +M EE V P+ ++I++L+  C     L+  KW H 
Sbjct: 417 VVAWSTMIAGFARNGKPDEAISVFKQMNEE-VIPNNVSIMNLMEACAVSAELRQSKWAHG 475

Query: 300 YILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
             +R G    +A+  +++DMY KC +I ++   F+ +  K+V+ W+A+ISA+       +
Sbjct: 476 IAVRRGLASEVAIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHE 535

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALV 418
           A  LF  +K +  +PN VT + LLS C+  G +E G  +  + ++K G+E  +   + +V
Sbjct: 536 ALMLFEKIKQNGTKPNAVTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEHYSCIV 595

Query: 419 DMYAKCGDVNGAYRLFSE 436
           DM ++ G  N A  L  +
Sbjct: 596 DMLSRAGKFNEALELIEK 613



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 176/320 (55%), Gaps = 9/320 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N ++++YI N     AL +   M + G+E D  T+  +L+     L +   + +HG
Sbjct: 316 IISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHG 375

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             I+ G + +  + N++I  Y++C  +  AR +FD M  +DVV+WSTMI G+ R G P+E
Sbjct: 376 VIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDE 435

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+ V ++M   ++ P+ V++++++   A  A++   K  H   VR     +  VAI T++
Sbjct: 436 AISVFKQMN-EEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASE--VAIGTSI 492

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI-NEGVRLFAEMIEENVFPS 274
           IDMYSKCG++  + + FN++ Q +VV W+ MIS + R N + +E + LF ++ +    P+
Sbjct: 493 IDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAF-RINGLAHEALMLFEKIKQNGTKPN 551

Query: 275 EITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
            +T LSL+  C   G ++ G  +  + + ++G E  L   + +VDM  +  +   A  L 
Sbjct: 552 AVTALSLLSACSHGGLIEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELI 611

Query: 334 DGMKSK---DVMIWNAVISA 350
           + +  +      IW  ++S+
Sbjct: 612 EKLPKEMEAGASIWGTLLSS 631



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 218/474 (45%), Gaps = 22/474 (4%)

Query: 142 TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN 201
           + I+     G  +EAL++  E+R    + S+  ++  +         +LG A+H C+++ 
Sbjct: 17  SKIKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNTSFNLGTAMHGCLIKQ 76

Query: 202 -CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
            C+      +IA + ID Y K G+L  A++ F+       VSW VM+ G      I  G+
Sbjct: 77  GCQSS---TSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGL 133

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
             F +    +  P+  ++L +I     +     G   H YI R+GF   L++ N+L+ +Y
Sbjct: 134 CWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLY 193

Query: 321 GKCREIRSARTLFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKV-SKVRPNEVT 378
            +   +  A  LF  M  + DV+ W+ +I  + Q    ++ F +F +M   + + P+ VT
Sbjct: 194 AEVH-MYFAYKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVT 252

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
           +V +L  CT    + +G  +H  +  +GLE D+ +  +L+DMY+KC +V+ A++ F E  
Sbjct: 253 VVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIP 312

Query: 439 YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKS 498
            ++I  WN M++ Y ++    EAL     M R G + + +T   +L    H        S
Sbjct: 313 EKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHF-----LDS 367

Query: 499 VFDKMVHGLGLVPKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +  + VHG+ +    E        ++D   +  L++ A  +   M  + +++ W  ++A 
Sbjct: 368 LKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMN-KKDVVAWSTMIAG 426

Query: 555 SKLHKNPSMGEIAATQI-LEIEPQNYGYNVLMSNIYAVA----NRWNDVAGVRR 603
              +  P        Q+  E+ P N     LM      A    ++W     VRR
Sbjct: 427 FARNGKPDEAISVFKQMNEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRR 480



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 165/354 (46%), Gaps = 15/354 (4%)

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
            E ++L+ E+       S+  +L  I++        LG  +H  +++ G + S ++AN+ 
Sbjct: 29  QEALQLYHEIRISGAQLSDTWVLPSILKACSNTSFNLGTAMHGCLIKQGCQSSTSIANST 88

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           +D Y K  ++ SA+  FD  K+KD + WN ++        I      FI  + +  +PN 
Sbjct: 89  IDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNI 148

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
            +++ ++    E      G   H YI + G    + ++ +L+ +YA+   +  AY+LF E
Sbjct: 149 SSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAYKLFGE 207

Query: 437 -AIYRDICMWNAMMAGYGMHGCGEEALIFFVDM-ERSGVKPNGITFIGLLNACSHAGLVT 494
            ++  D+  W+ M+ G+   G  E+  + F +M   +G+ P+G+T + +L AC++   ++
Sbjct: 208 MSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDIS 267

Query: 495 EGKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
            G      MVHGL    GL   +     ++D+  +   +  A +  K +P   N+I W  
Sbjct: 268 LG-----TMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIP-EKNIISWNL 321

Query: 551 LLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRV 604
           +L+A  L  N S  E  A     +        V ++N+  +A  + D    R V
Sbjct: 322 MLSAYIL--NESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSV 373


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  350 bits (897), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 195/593 (32%), Positives = 325/593 (54%), Gaps = 7/593 (1%)

Query: 39   YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
            +N++++ Y      S    +++ MR +G   D  T+ +++  CA       G  IH   +
Sbjct: 516  WNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCL 575

Query: 99   KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            ++ LD    V NAL+ MYS  G L  A +LF  M  RD++SW+TMI  Y +     +AL+
Sbjct: 576  RSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALK 635

Query: 159  VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             + ++   +  P+ +   S +   +    +  GK +HA V++      L   +  +LI M
Sbjct: 636  TLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNL--LVGNSLITM 693

Query: 219  YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
            Y KC ++  A+++F  +  + +VS+ V+I GY    +  + +++F+ M    + P+ IT+
Sbjct: 694  YGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITM 753

Query: 279  LSLIIECGFVGGLQL---GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            ++  I   F     L   G+ LHAYI+R GF     +AN+L+ MY KC  + S+  +F+ 
Sbjct: 754  IN--IHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNS 811

Query: 336  MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
            + +K+++ WNA+I+A  Q    ++A +LFI M+ +  + + V +   LS C    +LE G
Sbjct: 812  ITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEG 871

Query: 396  KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
              LH    K GL+ D  +  A +DMY KCG ++   ++  +   R    WN +++GY  +
Sbjct: 872  MQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKY 931

Query: 456  GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
            G  +EA   F  M  +G KP+ +TF+ LL+ACSHAGLV +G   ++ M    G+ P I+H
Sbjct: 932  GYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKH 991

Query: 516  YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
              C+VDLLGR G   EA + I+ MP+ PN ++W +LL++S+ HKN  +G   A ++LE++
Sbjct: 992  CVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELD 1051

Query: 576  PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            P +    VL+SN+YA   RW DV  +R  MK I + K P  S +++   V  F
Sbjct: 1052 PFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPACSWLKLKNEVSTF 1104



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 148/520 (28%), Positives = 260/520 (50%), Gaps = 13/520 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+ +   N     AL  Y  MR++G   +     T++  C  +     G ++    I
Sbjct: 415 WTALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVI 474

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +GL     V+N+LI M+   G +  A  LFD M   D +SW+ MI  Y   G+  +   
Sbjct: 475 VSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFL 534

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V  +MR   +RP    + S++S+ A       G  IH+  +R+  D    V +  AL++M
Sbjct: 535 VFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSS--VTVINALVNM 592

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YS  G L+ A+ LF  +++  ++SW  MIS Y++     + ++   ++   N  P+ +T 
Sbjct: 593 YSAAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTF 652

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +  C   G L  GK +HA +L+   + +L + N+L+ MYGKC  +  A  +F  M +
Sbjct: 653 SSALGACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPT 712

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL-SLCTEAGALEMGKW 397
            D++ +N +I  YA      KA ++F  M+ + ++PN +TM+ +  S  +       G+ 
Sbjct: 713 HDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRP 772

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH YI + G   D  +  +L+ MYAKCG++  +  +F+    ++I  WNA++A     G 
Sbjct: 773 LHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGH 832

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           GEEAL  F+DM+ +G K + +     L++C+    + EG       +HGLG+   ++   
Sbjct: 833 GEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEG-----MQLHGLGMKSGLDSDS 887

Query: 518 CMV----DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            +V    D+ G+ G +DE  +++    +RP    W  L++
Sbjct: 888 YVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQ-CWNTLIS 926



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 146/554 (26%), Positives = 264/554 (47%), Gaps = 28/554 (5%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMY---SECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           IHG A++  L   A+  N L+  Y    +  +  +A +LFDEM +R   +W T + G  R
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA---DVDLGKAIHACVVRNCKDEK 206
            G   +A E++R MR   +  S  A+ S+V+          +  G AIHA   R      
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHR--AGLM 378

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
             V I TAL+ +Y   G ++ A++LF  + + +VVSWT ++        + E +R + +M
Sbjct: 379 GNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQM 438

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
             + V  +     +++  CG +     G  + + ++ +G +  +++AN+L+ M+G    +
Sbjct: 439 RRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRV 498

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             A  LFD M+  D + WNA+IS Y+      K F +F  M+   +RP+  T+  L+S+C
Sbjct: 499 HDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVC 558

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
             +     G  +H+   +  L+  V +  ALV+MY+  G ++ A  LF     RD+  WN
Sbjct: 559 ASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWN 618

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
            M++ Y  +    +AL     +  +   PN +TF   L ACS  G + +G     KMVH 
Sbjct: 619 TMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDG-----KMVHA 673

Query: 507 LGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN-- 560
           + L   ++        ++ + G+   +++A ++ +SMP   +++ +  L+    + ++  
Sbjct: 674 IVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTH-DIVSYNVLIGGYAVLEDGT 732

Query: 561 PSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
            +M   +  +   I+P NY   + M NI+      ND+    R +    ++   GF S E
Sbjct: 733 KAMQVFSWMRSAGIKP-NY---ITMINIHGSFASSNDLHNYGRPLHAYIIRT--GFLSDE 786

Query: 621 --VNGLVHKFIRGG 632
              N L+  + + G
Sbjct: 787 YVANSLITMYAKCG 800



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 207/425 (48%), Gaps = 9/425 (2%)

Query: 36   LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
            L  +N++++SY++N   + AL     +       ++ T  + L AC+       GK +H 
Sbjct: 614  LISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHA 673

Query: 96   FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              ++  L  +  V N+LI MY +C S+  A  +F  MP  D+VS++ +I GY       +
Sbjct: 674  IVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTK 733

Query: 156  ALEVMREMRFMDIRPSEVAMISMVSLFADVADV-DLGKAIHACVVRN--CKDEKLGVAIA 212
            A++V   MR   I+P+ + MI++   FA   D+ + G+ +HA ++R     DE     +A
Sbjct: 734  AMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIRTGFLSDEY----VA 789

Query: 213  TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
             +LI MY+KCGNL  +  +FN +   ++VSW  +I+  ++     E ++LF +M      
Sbjct: 790  NSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNK 849

Query: 273  PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
               + +   +  C  +  L+ G  LH   +++G +    + NA +DMYGKC ++     +
Sbjct: 850  LDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQV 909

Query: 333  FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
                  +    WN +IS YA+     +A E F  M  +  +P+ VT V LLS C+ AG +
Sbjct: 910  VPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLV 969

Query: 393  EMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMA 450
            + G  + ++     G+   +     +VD+  + G    A +   E  +  +  +W ++++
Sbjct: 970  DKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLS 1029

Query: 451  GYGMH 455
                H
Sbjct: 1030 SSRTH 1034



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/292 (22%), Positives = 130/292 (44%), Gaps = 28/292 (9%)

Query: 14   RQCHAHIIKTHFKF-------------------SYTNIINPLTR-----YNSLVTSYIKN 49
            R  HA+II+T F                     S TNI N +T      +N+++ + ++ 
Sbjct: 771  RPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQL 830

Query: 50   NKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVS 109
                 AL ++  M+  G+++D   +   L +CA +     G ++HG  +K+GLD D+YV 
Sbjct: 831  GHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVV 890

Query: 110  NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
            NA + MY +CG +     +  +   R    W+T+I GY + G  +EA E  ++M     +
Sbjct: 891  NAAMDMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRK 950

Query: 170  PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
            P  V  ++++S  +    VD G   +  +  +      G+     ++D+  + G  A A+
Sbjct: 951  PDYVTFVALLSACSHAGLVDKGIDYYNSMASSFGVSP-GIKHCVCIVDLLGRLGRFAEAE 1009

Query: 230  QLFNRLN--QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            +    +    N ++ W  ++S       +  G +   +++E + F     +L
Sbjct: 1010 KFIEEMPVLPNDLI-WRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVL 1060



 Score = 47.8 bits (112), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMY---SECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           IHG A++  L   A+  N L+  Y    +  +  +A +LFDEM +R   +W T + G  R
Sbjct: 38  IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 97

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA---DVDLGKAIHACVVR 200
            G    A E++R MR   +  S  A+ S+V+          +  G AIHA   R
Sbjct: 98  CGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHR 151


>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Vitis vinifera]
          Length = 847

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 179/605 (29%), Positives = 330/605 (54%), Gaps = 51/605 (8%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQ-------------VL 85
           + +++     +++ + A  ++  M +N   VD+ ++ ++L  C++             VL
Sbjct: 206 FTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVL 265

Query: 86  MTHL-GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
            + + G+++H   IK+G + D +++N+L+ MY++ G++ SA  +F  MP   VVSW+ MI
Sbjct: 266 SSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMI 325

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
            GY +     +A+E ++ M++    P E+  ++M+                AC+      
Sbjct: 326 AGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLV---------------ACI------ 364

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
                           K G++   +Q+F+ ++  S+ SW  ++SGY +     E V+LF 
Sbjct: 365 ----------------KSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFR 408

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           EM   +V P   T+  ++     +  L+ G+ +HA   +  F   + +A+ L+ MY KC 
Sbjct: 409 EMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCG 468

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
           ++  A+ +FD +   D++ WN++++  +      +AF  F  M+   + P++ +   +LS
Sbjct: 469 KVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLS 528

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
            C +  +L  G+ +H+ I ++G   D  + +AL+DMY+KCGDV+ A  +F   + ++   
Sbjct: 529 CCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVT 588

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           WN M+ GY  +GCG+EA++ + DM  SG KP+GITF+ +L ACSH+GLV  G  +F+ M 
Sbjct: 589 WNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQ 648

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
              G+ P ++HY C++D LGRAG L EA  +I  MP + + I+W  LL++ +++ + S+ 
Sbjct: 649 QEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLA 708

Query: 565 EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
             AA ++  ++PQN    VL++NIY+   RW+D   VR +M   +V K+PG+S +E    
Sbjct: 709 RRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNG 768

Query: 625 VHKFI 629
           +  F+
Sbjct: 769 MQAFM 773



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/531 (26%), Positives = 255/531 (48%), Gaps = 53/531 (9%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N+L+++  +N     AL +Y  M + G    +FT+ ++L AC  ++    G+  HG
Sbjct: 102 IVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHG 161

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            +IK GLD + YV NAL+ MY++C  +  A   F ++P  + VS++ M+ G        E
Sbjct: 162 ISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNE 221

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFA-------------DVADVDL-GKAIHACVVRN 201
           A  + R M    I    V++ S++ + +             DV   D+ G+ +H   +++
Sbjct: 222 AFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKH 281

Query: 202 CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVR 261
             +  L   +  +L+DMY+K GN+  A+ +F  + + SVVSW VMI+GY + ++ ++ + 
Sbjct: 282 GFESDL--HLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIE 339

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
               M      P EIT +++++ C                +++G                
Sbjct: 340 YLQRMQYHGFEPDEITYVNMLVAC----------------IKSG---------------- 367

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
              +I + R +FDGM S  +  WN ++S Y+Q     +A +LF  M+   V P+  T+  
Sbjct: 368 ---DIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAI 424

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           +LS       LE G+ +H   +K     D+ L + L+ MY+KCG V  A R+F      D
Sbjct: 425 ILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELD 484

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           I  WN+MMAG  ++   +EA  FF  M   G+ P+  ++  +L+ C+    +++G+ V  
Sbjct: 485 IVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHS 544

Query: 502 KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           ++    G +        ++D+  + G +D A   +  M L  N + W  ++
Sbjct: 545 QIARE-GYMNDAFVGSALIDMYSKCGDVDAA-RWVFDMMLGKNTVTWNEMI 593



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 220/439 (50%), Gaps = 15/439 (3%)

Query: 14  RQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT 73
           +Q H   IK  F+       + L   NSL+  Y KN    SA  I+     N  EV   +
Sbjct: 272 QQVHCLTIKHGFE-------SDLHLNNSLLDMYAKNGNMDSAEMIFV----NMPEVSVVS 320

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
              ++    Q   +    E       +G + D      ++    + G + + R +FD M 
Sbjct: 321 WNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMS 380

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
           +  + SW+T++ GY +    +EA+++ REM+F  + P    +  ++S  A +  ++ G+ 
Sbjct: 381 SPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQ 440

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           +HA  V      +  + +A+ LI MYSKCG +  AK++F+R+ +  +V W  M++G    
Sbjct: 441 VHA--VSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLN 498

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
           +   E    F +M E+ +FPS+ +  +++  C  +  L  G+ +H+ I R G+     + 
Sbjct: 499 SLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVG 558

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           +AL+DMY KC ++ +AR +FD M  K+ + WN +I  YAQ  C D+A  L+  M  S  +
Sbjct: 559 SALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEK 618

Query: 374 PNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR 432
           P+ +T V +L+ C+ +G ++ G K  ++  ++ G+E  V   T ++D   + G ++ A  
Sbjct: 619 PDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEV 678

Query: 433 LFSEAIYR-DICMWNAMMA 450
           L  +   + D  +W  +++
Sbjct: 679 LIDKMPCKYDPIIWEVLLS 697



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/477 (24%), Positives = 208/477 (43%), Gaps = 82/477 (17%)

Query: 68  EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY 127
           E     + ++L+ C        GK IH   +++ L  D ++SN LI+ Y++C ++ ++R 
Sbjct: 2   ETKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRR 61

Query: 128 LFDEMPNRD-------------------------------VVSWSTMIRGYHRGGLPEEA 156
           LFD+MP RD                               +VSW+T+I    R G  ++A
Sbjct: 62  LFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKA 121

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           L V   M      P+   + S++S    + DV+ G+  H   ++   D    + +  AL+
Sbjct: 122 LGVYYRMSREGFVPTHFTLASVLSACGALVDVECGRRCHGISIKIGLDNN--IYVGNALL 179

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
            MY+KC  +  A Q F  + + + VS+T M+ G    +++NE  RLF  M+   +    +
Sbjct: 180 GMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSV 239

Query: 277 TILSLIIEC--GFVGGLQL------------GKWLHAYILRNGFEFSLAMANALVDMYGK 322
           ++ S++  C  G  G   L            G+ +H   +++GFE  L + N+L+DMY K
Sbjct: 240 SLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAK 299

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
              + SA  +F  M    V+ WN +I+ Y Q     KA E    M+     P+E+T V +
Sbjct: 300 NGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNM 359

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           L  C ++G +E G+                                   ++F       +
Sbjct: 360 LVACIKSGDIEAGR-----------------------------------QMFDGMSSPSL 384

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
             WN +++GY  +   +EA+  F +M+   V P+  T   +L++ +   L+  G+ V
Sbjct: 385 SSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQV 441



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 175/359 (48%), Gaps = 49/359 (13%)

Query: 191 GKAIHACVVRN-CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
           GK IHA ++R+   D+     ++  LI+ Y+KC  +  +++LF+++ +  + +W  ++  
Sbjct: 24  GKLIHAHMLRSRLSDDTF---LSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGA 80

Query: 250 YIRCNEINEGVRLFAEMIEENVF-------------------------------PSEITI 278
           Y + +E+ +   LFAEM E N+                                P+  T+
Sbjct: 81  YCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTL 140

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  CG +  ++ G+  H   ++ G + ++ + NAL+ MY KCR I  A   F  +  
Sbjct: 141 ASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPE 200

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM---- 394
            + + + A++   A +  +++AF LF  M  +++  + V++  +L +C+  G  E     
Sbjct: 201 PNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHD 260

Query: 395 ----------GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
                     G+ +H    K G E D+ L  +L+DMYAK G+++ A  +F       +  
Sbjct: 261 SNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVS 320

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
           WN M+AGYG      +A+ +   M+  G +P+ IT++ +L AC  +G +  G+ +FD M
Sbjct: 321 WNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGM 379



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 142/342 (41%), Gaps = 48/342 (14%)

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           GK +HA++LR+       ++N L++ Y KC  I ++R LFD M  +D+  WNA++ AY +
Sbjct: 24  GKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCK 83

Query: 354 AHCIDKAFELFIHMKVSKVR-------------------------------PNEVTMVGL 382
           A  ++ A  LF  M    +                                P   T+  +
Sbjct: 84  ASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLASV 143

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           LS C     +E G+  H    K GL+ ++ +  AL+ MYAKC  +  A + F +    + 
Sbjct: 144 LSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNE 203

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL----VTEGKS 498
             + AMM G        EA   F  M R+ +  + ++   +L  CS  G     + +   
Sbjct: 204 VSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSND 263

Query: 499 VFDKMVHGL---------GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           V    VHG          G    +     ++D+  + G +D A  +  +MP   +++ W 
Sbjct: 264 VLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMP-EVSVVSWN 322

Query: 550 ALLA--ASKLHKNPSMGEIAATQILEIEPQNYGY-NVLMSNI 588
            ++A    K   + ++  +   Q    EP    Y N+L++ I
Sbjct: 323 VMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACI 364



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 112/259 (43%), Gaps = 19/259 (7%)

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
           +  LL  C +  A   GK +H ++ +  L  D  L   L++ YAKC  ++ + RLF +  
Sbjct: 8   LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67

Query: 439 YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKS 498
            RDI  WNA++  Y      E+A + F +M    +    +++  L++A +  G   +   
Sbjct: 68  KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNI----VSWNTLISALTRNGFEQKALG 123

Query: 499 VFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD-----EAHEMIKSMPLRPNMIVWGALLA 553
           V+ +M    G VP   H+     L     L+D       H +   + L  N+ V  ALL 
Sbjct: 124 VYYRMSRE-GFVPT--HFTLASVLSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLG 180

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
                K   +G+         EP    +  +M  + A +++ N+   + R+M   R+  +
Sbjct: 181 MYA--KCRCIGDAIQAFGDVPEPNEVSFTAMMGGL-ADSDQVNEAFRLFRLMLRNRIHVD 237

Query: 614 PGFSSVEVNGLVHKFIRGG 632
               SV ++ ++    RGG
Sbjct: 238 ----SVSLSSVLGVCSRGG 252


>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
          Length = 625

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 183/552 (33%), Positives = 323/552 (58%), Gaps = 16/552 (2%)

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           L ++ H   +  GL  +++++  LI  Y+ C     +R +FD + +++V  W+++I G  
Sbjct: 41  LTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLINGCV 100

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEK 206
           +  L  EA ++  +M   D+ P +  + ++  + +++  +  GK+IH   +R     D  
Sbjct: 101 KNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFVSD-- 158

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI---RCNEINEGVRLF 263
               +A +++ MY KCGN   ++++F+ +   +  SW V+I+GY     CN   E     
Sbjct: 159 --TVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFV 216

Query: 264 AEMIEENVFPSEITILSLIIEC-GFVGGLQLGKWLHAYILRN----GFEFSLAMANALVD 318
            +M  + V P   TI SL+  C G +G    G+ LH YI++N    G +  + +   L+D
Sbjct: 217 KQMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLID 276

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV-SKVRPNEV 377
           MY +  ++   R +FD MK ++V  W A+I+ Y +    D+A  LF  M+V   V PN V
Sbjct: 277 MYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEPNRV 336

Query: 378 TMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SE 436
           ++V +L  C+    L  G+ +H +  ++ L  +V L  AL+DMY+KCG ++ A R+F  +
Sbjct: 337 SLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDD 396

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
           ++ +D   W++M++GYG+HG G+EA++ +  M ++G++P+ IT +G+L+AC  +GLV EG
Sbjct: 397 SLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACGRSGLVNEG 456

Query: 497 KSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
            +++  +++  G+ P +E   C+VD+LGRAG LD A + IK++P+ P   VWGAL++ S 
Sbjct: 457 LNIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIPVEPGPSVWGALVSCSI 516

Query: 557 LHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGF 616
           +H +  M E+A   ++++EP+N    V +SN+YA + RW+ VA VRR+MK+ R++K PG 
Sbjct: 517 IHGDLEMQELAYRFLIQLEPKNPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGC 576

Query: 617 SSVEVNGLVHKF 628
           S + +N   H F
Sbjct: 577 SWISINNKTHCF 588



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 145/501 (28%), Positives = 258/501 (51%), Gaps = 43/501 (8%)

Query: 9   NLEQTRQCHAHIIK----------THFKFSYTNIINPLTR--------------YNSLVT 44
           +L+ TRQ H+ I+           T   F+Y    +P                 +NSL+ 
Sbjct: 38  SLKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLIN 97

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
             +KN   + A  ++  M  +    D+FT+ T+ K  +++     GK IHG +I+ G   
Sbjct: 98  GCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFVS 157

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG---LPEEALEVMR 161
           D  V+N+++ MY +CG+   +R +FDEM  R+  SW+ +I GY   G     EE  E ++
Sbjct: 158 DTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVK 217

Query: 162 EMRFMDIRPSEVAMISMVSLF-ADVADVDLGKAIHACVVRNCKDEKLG----VAIATALI 216
           +M+  ++RP    + S++ L   D+   D G+ +H  +V+N  +  LG    V +   LI
Sbjct: 218 QMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKN--ELVLGLDSDVHLGCCLI 275

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM-IEENVFPSE 275
           DMYS+   +   +++F+R+   +V SWT MI+GY+   + +E + LF +M + + V P+ 
Sbjct: 276 DMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGVEPNR 335

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF-D 334
           ++++S++  C    GL  G+ +H + +R      +++ NAL+DMY KC  + SAR +F D
Sbjct: 336 VSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFED 395

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
               KD + W+++IS Y       +A  L+  M  + +RP+ +T VG+LS C  +G +  
Sbjct: 396 DSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACGRSGLVNE 455

Query: 395 GKWLH-TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD--ICMWNAMMAG 451
           G  ++ + I   G+E  + +   +VDM  + G ++ A   F +AI  +    +W A+++ 
Sbjct: 456 GLNIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALD-FIKAIPVEPGPSVWGALVSC 514

Query: 452 YGMHG---CGEEALIFFVDME 469
             +HG     E A  F + +E
Sbjct: 515 SIIHGDLEMQELAYRFLIQLE 535



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 133/270 (49%), Gaps = 8/270 (2%)

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
            L+L +  H+ IL  G   +  +A  L+  Y  C+    +R +FD ++ K+V +WN++I+
Sbjct: 38  SLKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHKNVFLWNSLIN 97

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
              +    ++AF+LF  M  S V P++ T+  L  + +E GAL  GK +H    + G   
Sbjct: 98  GCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRTGFVS 157

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG-CG--EEALIFFV 466
           D ++  +++ MY KCG+ + + ++F E   R+   WN ++AGY + G C   EE   F  
Sbjct: 158 DTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFVK 217

Query: 467 DMERSGVKPNGITFIGLLNACS-HAGLVTEGKSVFDKMVHG---LGLVPKIEHYGCMVDL 522
            M+   V+P+  T   LL  C    G    G+ +   +V     LGL   +    C++D+
Sbjct: 218 QMQMDEVRPDAYTISSLLPLCDGDMGKWDYGRELHCYIVKNELVLGLDSDVHLGCCLIDM 277

Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
             R+  +     +   M  R N+  W A++
Sbjct: 278 YSRSNKVVVGRRVFDRMKCR-NVFSWTAMI 306


>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 208/554 (37%), Positives = 297/554 (53%), Gaps = 57/554 (10%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY------LFDEMPNRD--VVSWST 142
           K++H    KNGLD        L+   +E  S  S  Y      LF E    D  +   ++
Sbjct: 42  KQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNS 101

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           +IRGY   GL  EA+ +   M  + + P+      ++S    +A    G  +H  VV+  
Sbjct: 102 LIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMG 161

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
            +E   V I   LI  Y++CG++ +  ++F  +++ +VVSWT +I GY R +   E V L
Sbjct: 162 LEED--VFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSL 219

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F EM+ +                                          M NALVDMY K
Sbjct: 220 FFEMLNK-----------------------------------------VMVNALVDMYMK 238

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C  I +A+ LFD    ++++++N ++S YA+     +A  +   M     RP+ VTM+  
Sbjct: 239 CGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSA 298

Query: 383 LSLCTEAGALEMGK-----WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
           +S   +   L  GK     W+HTYIEK G+  D+ L TALVDM+A+CGD   A ++F++ 
Sbjct: 299 ISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKM 358

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
             RD+  W A +    M G GE A   F  M   GVKP+ + F+ +L ACSH G V +G 
Sbjct: 359 TERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGL 418

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
            +F  M    G+ P+IEHYGCMVDLLGRAGLL EA ++IKSMP+ PN +VWG+LLAA ++
Sbjct: 419 HIFSLM-EDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRV 477

Query: 558 HKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
           HKN  M   AA +I E+ PQ  G +VL+SNIYA A +W DVA VR  ++E  V+K PG S
Sbjct: 478 HKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSS 537

Query: 618 SVEVNGLVHKFIRG 631
           SV+VNG++H+F  G
Sbjct: 538 SVQVNGVIHEFTSG 551



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 200/428 (46%), Gaps = 49/428 (11%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           + L   NSL+  Y        A+ +Y  M   G   +++T P +L  C ++     G ++
Sbjct: 94  DALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQV 153

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG  +K GL+ D ++ N LI  Y+ECG +     +F+ M  R+VVSW+++I GY RG  P
Sbjct: 154 HGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRP 213

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           +EA                      VSLF                      E L   +  
Sbjct: 214 KEA----------------------VSLFF---------------------EMLNKVMVN 230

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMY KCG +  AK+LF+     ++V +  ++S Y R     E + +  EM+++   P
Sbjct: 231 ALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRP 290

Query: 274 SEITILSLIIECG-----FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
             +T+LS I         F G +  G W+H YI +NG    + +  ALVDM+ +C + +S
Sbjct: 291 DRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQS 350

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           A  +F+ M  +DV  W A I   A     + A  LF  M +  V+P+ V  V +L+ C+ 
Sbjct: 351 AMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSH 410

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNA 447
            G +E G  + + +E  G+   +     +VD+  + G +  A+ L  S  +  +  +W +
Sbjct: 411 GGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGS 470

Query: 448 MMAGYGMH 455
           ++A   +H
Sbjct: 471 LLAACRVH 478


>gi|449526313|ref|XP_004170158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 706

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 204/619 (32%), Positives = 329/619 (53%), Gaps = 26/619 (4%)

Query: 16  CHAHI-IKTHFKFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT 73
           C+A++ +  H    + ++I+P LT +N+++ +  +  +    L +Y  M       D  T
Sbjct: 68  CYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEET 127

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
            P +L++C+       G+ IHG+ +K G D    V+ AL +MY EC    +A  LFD+  
Sbjct: 128 YPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRS 187

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
            +D+   S++     +    E    V   M    + P      +++   A +  + L K 
Sbjct: 188 VKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKI 247

Query: 194 IHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           +H   + +    KL   + + TA++ +YSK  +L  A++LF+++ +   V W +MI+ Y 
Sbjct: 248 VHCIAIVS----KLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYA 303

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           R  +  E + LF  M    +     T L +I     +  +  GK  HA+ILRNG +  ++
Sbjct: 304 REGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVS 363

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           + N+L+DMY +C+ + SA  +F+ M  K  +                 A  LF  MK   
Sbjct: 364 VHNSLIDMYCECKILDSACKIFNWMTDKSSLT----------------ALSLFSKMKSDG 407

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           ++ + V M+ +L      GALE  K+LH Y  K GL     L TAL+  YAKCG +  A 
Sbjct: 408 IQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQ 467

Query: 432 RLFSEAIY--RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           RLF E     +D+ MWN+M++ +  HG   +    +  M+ S  KP+ +TF+GLL AC +
Sbjct: 468 RLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVN 527

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           +GLV +GK  F +M    G  P  EHY CMV+LLGRAGL+ EA E++K+MP++P+  VWG
Sbjct: 528 SGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWG 587

Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR 609
            LL+A K+H    + E AA +++ +EP+N G  +L+SNIYA A +W+ VA +R  ++   
Sbjct: 588 PLLSACKMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRNKG 647

Query: 610 VKKEPGFSSVEVNGLVHKF 628
           +KK PG S +E+NG V +F
Sbjct: 648 LKKIPGCSWLEINGHVTEF 666



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 121/489 (24%), Positives = 228/489 (46%), Gaps = 27/489 (5%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           T+  +   C  +   HL ++IH   I +G   +  +S+ LI  Y+  G L  +  +F  +
Sbjct: 29  TLSLLFSRCNSI--QHL-QQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSV 85

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
            + ++  ++ ++R   R G  E  L V ++M    + P E     ++   +  ++V  G+
Sbjct: 86  IDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGR 145

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
            IH  +V+   D  L   +ATAL +MY +C     A QLF++ +    + W   ++    
Sbjct: 146 TIHGYLVKLGFD--LFDVVATALAEMYEECIEFENAHQLFDKRSVKD-LGWPSSLTTEGP 202

Query: 253 CNEINEGV-RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
            N+  EG+ R+F  MI E + P   T  +L+     +  +QL K +H   + +     L 
Sbjct: 203 QNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLL 262

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           +  A++ +Y K R +  AR LFD M  KD ++WN +I+AYA+     +  ELF  M  S 
Sbjct: 263 VNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSG 322

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           +R +  T + ++S   +   ++ GK  H +I + G +  V +  +L+DMY +C  ++ A 
Sbjct: 323 IRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSAC 382

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
           ++F           N M     +      AL  F  M+  G++ + +  I +L A  H G
Sbjct: 383 KIF-----------NWMTDKSSL-----TALSLFSKMKSDGIQADFVIMINILPAFVHIG 426

Query: 492 LVTEGKSVFD-KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL-RPNMIVWG 549
            +   K +    M  GL  +P +     ++    + G ++ A  + +   +   ++I+W 
Sbjct: 427 ALENVKYLHGYSMKLGLTSLPSLN--TALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWN 484

Query: 550 ALLAASKLH 558
           ++++A   H
Sbjct: 485 SMISAHANH 493



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 130/290 (44%), Gaps = 13/290 (4%)

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T+  L   C  +  LQ    +HA  + +GF  +  +++ L+D Y     +  +  +F  +
Sbjct: 29  TLSLLFSRCNSIQHLQ---QIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSV 85

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
              ++ ++NA++    +    ++   ++  M    + P+E T   +L  C+    +  G+
Sbjct: 86  IDPNLTLFNAILRNLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGR 145

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H Y+ K G ++  ++ TAL +MY +C +   A++LF +   +D+   +++      + 
Sbjct: 146 TIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQND 205

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH- 515
            GE     F  M    + P+  TF  LL     AGL         K+VH + +V K+   
Sbjct: 206 NGEGIFRVFGRMIAEQLVPDSFTFFNLLRFI--AGL---NSIQLAKIVHCIAIVSKLSGD 260

Query: 516 ---YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
                 ++ L  +   L +A ++   MP + + +VW  ++AA      P+
Sbjct: 261 LLVNTAVLSLYSKLRSLVDARKLFDKMPEK-DRVVWNIMIAAYAREGKPT 309


>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 754

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 184/581 (31%), Positives = 329/581 (56%), Gaps = 16/581 (2%)

Query: 61  FMRKNGSEVDN--FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSE 118
            + K G+E +   F +P +L+ C         + +HG  +K G   + +V + L+ +Y++
Sbjct: 53  LLNKEGTEEEEKLFYVP-LLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAK 111

Query: 119 CGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISM 178
           CG++  AR +F+ MP R+VV+W+T++ G+ +   P+ A+ V +EM +    PS   + ++
Sbjct: 112 CGNMEDARRVFENMPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAV 171

Query: 179 VSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
           +   + +  + LG   HA +++   D     ++ +AL  +YSKCG L  A + F+R+ + 
Sbjct: 172 LHACSSLQSLKLGDQFHAYIIKYHLD--FDTSVGSALCSLYSKCGRLEDALKAFSRIREK 229

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
           +V+SWT  +S         +G+RLF EMI E++ P+E T+ S + +C  +  L+LG  + 
Sbjct: 230 NVISWTSAVSACGDNGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVC 289

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
           +  ++ G+E +L + N+L+ +Y K   I  A   F+ M    ++ WNA+I+ +AQ   + 
Sbjct: 290 SLCIKFGYESNLRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELT 349

Query: 359 K-----------AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           K           A ++F  +  S ++P+  T+  +LS+C+   A+E G+ +H    K G 
Sbjct: 350 KDNLSACQRGSEALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGF 409

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
             DVI+ T+L+ MY KCG +  A + F E   R +  W +M+ G+  HG  ++AL  F D
Sbjct: 410 LSDVIVSTSLISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFED 469

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           M  +GV+PN +TF+G+L+ACSHAG+V++  + F+ M     + P ++HY CMVD+  R G
Sbjct: 470 MSLAGVRPNTVTFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLG 529

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSN 587
            L++A   IK M   P+  +W   +A  + H N  +G  A+ Q+L ++P++    VL+ N
Sbjct: 530 RLEQALNFIKKMNYEPSEFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLN 589

Query: 588 IYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           +Y  A+R++DV+ VR++M+  +V K   +S + +   V+ F
Sbjct: 590 MYLSADRFDDVSRVRKMMEVEKVGKLKDWSWISIKDKVYSF 630



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 237/461 (51%), Gaps = 18/461 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+  +++N++P  A++++  M   GS    +T+  +L AC+ +    LG + H + I
Sbjct: 133 WTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGDQFHAYII 192

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K  LD D  V +AL  +YS+CG L  A   F  +  ++V+SW++ +      G P + L 
Sbjct: 193 KYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNGAPVKGLR 252

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  EM   DI+P+E  + S +S   ++  ++LG  + +  ++   +  L V    +L+ +
Sbjct: 253 LFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRV--RNSLLYL 310

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR-----------CNEINEGVRLFAEMI 267
           Y K G +  A + FNR++  S+V+W  MI+G+ +           C   +E +++F+++ 
Sbjct: 311 YLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGSEALKIFSKLN 370

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
           +  + P   T+ S++  C  +  ++ G+ +HA  ++ GF   + ++ +L+ MY KC  I 
Sbjct: 371 QSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYNKCGSIE 430

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            A   F  M ++ ++ W ++I+ ++Q     +A  +F  M ++ VRPN VT VG+LS C+
Sbjct: 431 RASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTVTFVGVLSACS 490

Query: 388 EAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI-CMW 445
            AG +     +     +K  ++  +     +VDM+ + G +  A     +  Y     +W
Sbjct: 491 HAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKKMNYEPSEFIW 550

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKP-NGITFIGLLN 485
           +  +AG   HG  E  L F+   +   +KP +  T++ LLN
Sbjct: 551 SNFIAGCRSHGNLE--LGFYASEQLLSLKPKDPETYVLLLN 589



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/445 (21%), Positives = 197/445 (44%), Gaps = 70/445 (15%)

Query: 15  QCHAHIIKTHFKFSYT----------------NIINPLTR--------YNSLVTSYIKNN 50
           Q HA+IIK H  F  +                + +   +R        + S V++   N 
Sbjct: 186 QFHAYIIKYHLDFDTSVGSALCSLYSKCGRLEDALKAFSRIREKNVISWTSAVSACGDNG 245

Query: 51  KPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSN 110
            P   L ++  M     + + FT+ + L  C ++    LG ++    IK G + +  V N
Sbjct: 246 APVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRVRN 305

Query: 111 ALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY--------------HRGGLPEEA 156
           +L+ +Y + G +V A   F+ M +  +V+W+ MI G+               RG    EA
Sbjct: 306 SLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGS---EA 362

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATA 214
           L++  ++    ++P    + S++S+ + +  ++ G+ IHA  ++     D    V ++T+
Sbjct: 363 LKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSD----VIVSTS 418

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LI MY+KCG++  A + F  ++  ++++WT MI+G+ +     + + +F +M    V P+
Sbjct: 419 LISMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPN 478

Query: 275 EITILSLIIECGFVGGLQLGKWLHAY-ILRNGFEFSLAMAN--ALVDMYGKCREIRSART 331
            +T + ++  C   G   + + L+ + I++  ++    M +   +VDM+ +   +  A  
Sbjct: 479 TVTFVGVLSACSHAG--MVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALN 536

Query: 332 LFDGMK-SKDVMIWNAVISA-----------YAQAHCID------KAFELFIHMKVSKVR 373
               M       IW+  I+            YA    +       + + L ++M +S  R
Sbjct: 537 FIKKMNYEPSEFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSADR 596

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWL 398
            ++V+ V  +    + G L+   W+
Sbjct: 597 FDDVSRVRKMMEVEKVGKLKDWSWI 621


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 202/664 (30%), Positives = 343/664 (51%), Gaps = 43/664 (6%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTNIINPLTR-------------------------YNSLV 43
           +++  +Q HAH+ K  +      + N L                           +NSL+
Sbjct: 108 DMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLI 167

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH---LGKEIHGFAIKN 100
           +S     K   AL  +  M     E  +FT+ ++  AC+   M     +GK++H + ++ 
Sbjct: 168 SSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRK 227

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G + ++++ N L+ MY + G L S++ L      RD+V+W+T++    +     EALE +
Sbjct: 228 G-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYL 286

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
           REM    + P    + S++   + +  +  GK +HA  ++N   ++    + +AL+DMY 
Sbjct: 287 REMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE-NSFVGSALVDMYC 345

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPSEITIL 279
            C  +    ++F+ +    +  W  MI+GY +     E + LF EM E   +  +  T+ 
Sbjct: 346 NCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMA 405

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
            ++  C   G     + +H ++++ G +    + NAL+DMY +  +I  A+ +F  M+ +
Sbjct: 406 GVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDR 465

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKV---------SKV--RPNEVTMVGLLSLCTE 388
           D++ WN +I+ Y  +   + A  +   M++         S+V  +PN +T++ +L  C  
Sbjct: 466 DLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAA 525

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
             AL  GK +H Y  K  L  DV + +ALVDMYAKCG +  + ++F +   R++  WN +
Sbjct: 526 LSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVI 585

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +  YGMHG  ++A+     M   GVKPN +TFI +  ACSH+G+V EG  +F  M    G
Sbjct: 586 VMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYG 645

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI-VWGALLAASKLHKNPSMGEIA 567
           + P  +HY C+VDLLGRAG + EA+++I  +P   +    W +LL A ++H N  +GEIA
Sbjct: 646 VEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIA 705

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHK 627
           A  ++++EP    + VL++NIY+ A  W     VRR MK   V+KEPG S +E    VHK
Sbjct: 706 AQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHK 765

Query: 628 FIRG 631
           F+ G
Sbjct: 766 FVAG 769



 Score =  261 bits (668), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 166/536 (30%), Positives = 274/536 (51%), Gaps = 22/536 (4%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           L+ S +++N    A+  Y  M   G + DNF  P +LKA A +    LGK+IH    K G
Sbjct: 64  LLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFG 123

Query: 102 LDGDAY-VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
              D+  V+N L+ +Y +CG   +   +FD +  R+ VSW+++I         E ALE  
Sbjct: 124 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 183

Query: 161 REMRFMDIRPSEVAMISMV---SLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           R M   D+ PS   ++S+    S F     + +GK +HA  +R     +L   I   L+ 
Sbjct: 184 RCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRK---GELNSFIINTLVA 240

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY K G LA +K L        +V+W  ++S   +  +  E +    EM+ E V P   T
Sbjct: 241 MYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFT 300

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           I S++  C  +  L+ GK LHAY L+NG  + +  + +ALVDMY  C+++ S   +FDGM
Sbjct: 301 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGM 360

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMG 395
             + + +WNA+I+ YAQ    ++A  LFI M+ S  +  N  TM G++  C  +GA    
Sbjct: 361 FDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKK 420

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H ++ K+GL+ D  ++ AL+DMY++ G ++ A R+F +   RD+  WN ++ GY   
Sbjct: 421 EAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGYVFS 480

Query: 456 GCGEEALIFFVDME-----------RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
              E+AL+    M+           R  +KPN IT + +L +C+    + +GK +    +
Sbjct: 481 ERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 540

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
               L   +     +VD+  + G L  + ++   +P+R N+I W  ++ A  +H N
Sbjct: 541 KN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIR-NVITWNVIVMAYGMHGN 594



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 232/448 (51%), Gaps = 25/448 (5%)

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           W  ++R   R  L  EA+    +M  + I+P   A  +++   AD+ D+DLGK IHA V 
Sbjct: 61  WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120

Query: 200 RNCKDEKLG-----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
                 K G     V +A  L+++Y KCG+     ++F+R+++ + VSW  +IS      
Sbjct: 121 ------KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 174

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECG---FVGGLQLGKWLHAYILRNGFEFSLA 311
           +    +  F  M++E+V PS  T++S+ + C       GL +GK +HAY LR G E +  
Sbjct: 175 KWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKG-ELNSF 233

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           + N LV MYGK  ++ S++ L    + +D++ WN V+S+  Q     +A E    M +  
Sbjct: 234 IINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEG 293

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG-LEVDVILKTALVDMYAKCGDVNGA 430
           V P+  T+  +L  C+    L  GK LH Y  K G L+ +  + +ALVDMY  C  V   
Sbjct: 294 VEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 353

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS-GVKPNGITFIGLLNACSH 489
            R+F     R I +WNAM+ GY  +   EEAL+ F++ME S G+  N  T  G++ AC  
Sbjct: 354 CRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVR 413

Query: 490 AGLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           +G  ++ +++   +V  GL     +++   ++D+  R G +D A  +   M  R +++ W
Sbjct: 414 SGAFSKKEAIHGFVVKRGLDRDRFVQN--ALMDMYSRLGKIDIAKRIFGKMEDR-DLVTW 470

Query: 549 GALLAA---SKLHKNPSMGEIAATQILE 573
             ++     S+ H++ ++  +   QILE
Sbjct: 471 NTIITGYVFSERHED-ALLMLHKMQILE 497


>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 179/605 (29%), Positives = 330/605 (54%), Gaps = 51/605 (8%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQ-------------VL 85
           + +++     +++ + A  ++  M +N   VD+ ++ ++L  C++             VL
Sbjct: 177 FTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVL 236

Query: 86  MTHL-GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
            + + G+++H   IK+G + D +++N+L+ MY++ G++ SA  +F  MP   VVSW+ MI
Sbjct: 237 SSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMI 296

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
            GY +     +A+E ++ M++    P E+  ++M+                AC+      
Sbjct: 297 AGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLV---------------ACI------ 335

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
                           K G++   +Q+F+ ++  S+ SW  ++SGY +     E V+LF 
Sbjct: 336 ----------------KSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFR 379

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           EM   +V P   T+  ++     +  L+ G+ +HA   +  F   + +A+ L+ MY KC 
Sbjct: 380 EMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCG 439

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
           ++  A+ +FD +   D++ WN++++  +      +AF  F  M+   + P++ +   +LS
Sbjct: 440 KVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLS 499

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
            C +  +L  G+ +H+ I ++G   D  + +AL+DMY+KCGDV+ A  +F   + ++   
Sbjct: 500 CCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVT 559

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           WN M+ GY  +GCG+EA++ + DM  SG KP+GITF+ +L ACSH+GLV  G  +F+ M 
Sbjct: 560 WNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQ 619

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
              G+ P ++HY C++D LGRAG L EA  +I  MP + + I+W  LL++ +++ + S+ 
Sbjct: 620 QEHGVEPLVDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLA 679

Query: 565 EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
             AA ++  ++PQN    VL++NIY+   RW+D   VR +M   +V K+PG+S +E    
Sbjct: 680 RRAAEELFHLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWIEHKNG 739

Query: 625 VHKFI 629
           +  F+
Sbjct: 740 MQAFM 744



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 220/439 (50%), Gaps = 15/439 (3%)

Query: 14  RQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT 73
           +Q H   IK  F+       + L   NSL+  Y KN    SA  I+     N  EV   +
Sbjct: 243 QQVHCLTIKHGFE-------SDLHLNNSLLDMYAKNGNMDSAEMIFV----NMPEVSVVS 291

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
              ++    Q   +    E       +G + D      ++    + G + + R +FD M 
Sbjct: 292 WNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMS 351

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
           +  + SW+T++ GY +    +EA+++ REM+F  + P    +  ++S  A +  ++ G+ 
Sbjct: 352 SPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQ 411

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           +HA  V      +  + +A+ LI MYSKCG +  AK++F+R+ +  +V W  M++G    
Sbjct: 412 VHA--VSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLN 469

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
           +   E    F +M E+ +FPS+ +  +++  C  +  L  G+ +H+ I R G+     + 
Sbjct: 470 SLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVG 529

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           +AL+DMY KC ++ +AR +FD M  K+ + WN +I  YAQ  C D+A  L+  M  S  +
Sbjct: 530 SALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEK 589

Query: 374 PNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR 432
           P+ +T V +L+ C+ +G ++ G K  ++  ++ G+E  V   T ++D   + G ++ A  
Sbjct: 590 PDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPLVDHYTCIIDSLGRAGRLHEAEV 649

Query: 433 LFSEAIYR-DICMWNAMMA 450
           L  +   + D  +W  +++
Sbjct: 650 LIDKMPCKYDPIIWEVLLS 668



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 206/448 (45%), Gaps = 53/448 (11%)

Query: 68  EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY 127
           E     + ++L+ C        GK IH   +++ L  D ++SN LI+ Y++C ++ ++R 
Sbjct: 2   ETKTTYLASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRR 61

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRP--SEVAMISMVSLFADV 185
           LFD+MP RD+ +W+ ++  Y +    E+A  +  EM   +I    + ++ ++       +
Sbjct: 62  LFDQMPKRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGAL 121

Query: 186 ADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
            DV+ G+  H   ++   D    + +  AL+ MY+KC  +  A Q F  + + + VS+T 
Sbjct: 122 VDVECGRRCHGISIKIGLDNN--IYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTA 179

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC--GFVGGLQL---------- 293
           M+ G    +++NE  RLF  M+   +    +++ S++  C  G  G   L          
Sbjct: 180 MMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSD 239

Query: 294 --GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
             G+ +H   +++GFE  L + N+L+DMY K   + SA  +F  M    V+ WN +I+ Y
Sbjct: 240 VHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGY 299

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
            Q     KA E    M+     P+E+T V +L  C ++G +E G+               
Sbjct: 300 GQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGR--------------- 344

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
                               ++F       +  WN +++GY  +   +EA+  F +M+  
Sbjct: 345 --------------------QMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFR 384

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSV 499
            V P+  T   +L++ +   L+  G+ V
Sbjct: 385 SVHPDRTTLAIILSSLAGMMLLEGGRQV 412


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  349 bits (896), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 191/559 (34%), Positives = 294/559 (52%), Gaps = 43/559 (7%)

Query: 107 YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM 166
           +  NAL+   +    L     LF  M  RD VS++ +I G+  GG    A+ +   +   
Sbjct: 73  FTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRA 132

Query: 167 --DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI----ATALIDMYS 220
              +RPS + M +MV   + + D  LG+  H      C+  +LG  +     + L+ MY+
Sbjct: 133 GSSVRPSRITMSAMVMAASALGDRALGRQFH------CQILRLGFGVNAFVGSPLVGMYA 186

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP------- 273
           K G +  AK++F+ ++  +VV +  MI+G +RC  + E  RLF  M + +          
Sbjct: 187 KMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTG 246

Query: 274 ------------------------SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
                                    + T  S++  CG +  L+ GK +HAYI+R  ++ +
Sbjct: 247 FTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDN 306

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           + + +ALVDMY KCR I+ A T F  M  K+++ W A+I  Y Q  C ++A  +F  M+ 
Sbjct: 307 VFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQR 366

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
             + P++ T+  ++S C    +LE G   H      GL   + +  ALV +Y KCG +  
Sbjct: 367 DGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIED 426

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A+RLF E ++ D   W A++ GY   G  +E +  F  M    VKP+G+TFIG+L+ACS 
Sbjct: 427 AHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSR 486

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           AG V +G S F  M    G+VP  +HY CM+DL  R+G L EA E IK MP+ P+ I WG
Sbjct: 487 AGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWG 546

Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR 609
            LL+A +L  +  +G+ AA  +LEI+PQN    VL+ +++A    WN VA +RR M++ +
Sbjct: 547 TLLSACRLRGDMEIGQWAAENLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQ 606

Query: 610 VKKEPGFSSVEVNGLVHKF 628
           VKKEPG S ++    VH F
Sbjct: 607 VKKEPGCSWIKYKNKVHIF 625



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 228/453 (50%), Gaps = 37/453 (8%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLGKEIHGF 96
           YN+++  +      + A+ +Y  + + GS V     T+  ++ A + +    LG++ H  
Sbjct: 106 YNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQ 165

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP----------------------- 133
            ++ G   +A+V + L+ MY++ G +  A+ +FDEM                        
Sbjct: 166 ILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEA 225

Query: 134 --------NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV 185
                   +RD ++W+TM+ G+ + GL  +AL   R MRF  I   +    S+++    +
Sbjct: 226 RRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGAL 285

Query: 186 ADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           + ++ GK IHA ++R   D+   V + +AL+DMYSKC ++  A+  F R++  +++SWT 
Sbjct: 286 SALEQGKQIHAYIIRTHYDDN--VFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTA 343

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
           +I GY +     E VR+F+EM  + + P + T+ S+I  C  +  L+ G   H   L +G
Sbjct: 344 LIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSG 403

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
               + ++NALV +YGKC  I  A  LFD M   D + W A+++ YAQ     +  +LF 
Sbjct: 404 LMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFE 463

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKC 424
            M    V+P+ VT +G+LS C+ AG +E G  + H+  +  G+       T ++D+Y++ 
Sbjct: 464 KMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRS 523

Query: 425 GDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
           G +  A     +  ++ D   W  +++   + G
Sbjct: 524 GRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 133/269 (49%), Gaps = 34/269 (12%)

Query: 10  LEQTRQCHAHIIKTHFK------------FSYTNIINP------------LTRYNSLVTS 45
           LEQ +Q HA+II+TH+             +S    I P            +  + +L+  
Sbjct: 288 LEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIVG 347

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
           Y +N     A+ +++ M+++G + D+FT+ +++ +CA +     G + H  A+ +GL   
Sbjct: 348 YGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHY 407

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
             VSNAL+ +Y +CGS+  A  LFDEM   D VSW+ ++ GY + G  +E +++  +M  
Sbjct: 408 ITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLA 467

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA----TALIDMYSK 221
            D++P  V  I ++S  +    V+ G     C   +   +  G+       T +ID+YS+
Sbjct: 468 KDVKPDGVTFIGVLSACSRAGFVEKG-----CSYFHSMQKDHGIVPIDDHYTCMIDLYSR 522

Query: 222 CGNLAYAKQLFNRLNQN-SVVSWTVMISG 249
            G L  A++   ++  +   + W  ++S 
Sbjct: 523 SGRLKEAEEFIKQMPMHPDAIGWGTLLSA 551


>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 623

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 192/497 (38%), Positives = 285/497 (57%), Gaps = 6/497 (1%)

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
             W+T +R   +     +AL +  +M     RP+       +   A ++   LG   H  
Sbjct: 15  TPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQ 74

Query: 198 VVR-NCKDEKLGVAIATALIDMYSKCGNLAYAKQLF--NRLNQNSVVSWTVMISGYIRCN 254
           + +  C  E     + T LI MY K   +  A+++F  N  ++   V +  ++SGY+  +
Sbjct: 75  ITKVGCVFEPF---VQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNS 131

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
           + +E V LF +M EE V  + +T+L LI  C     L+LG  LH   L+ GF+  +++ N
Sbjct: 132 KCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVN 191

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
             + MY KC  +  A+ LFD M  K ++ WNA++S YAQ        EL+ +M ++ V P
Sbjct: 192 CFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHP 251

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           + VT+VG+LS C   GA  +G  +   I+  G   +  L  AL++MYA+CG++  A  +F
Sbjct: 252 DPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVF 311

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
                R +  W A++ GYGMHG GE A+  F +M RSG++P+G  F+ +L+ACSHAGL  
Sbjct: 312 DGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 371

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +G   F  M     L P  EHY CMVDLLGRAG L EA  +I+SMP++P+  VWGALL A
Sbjct: 372 QGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 431

Query: 555 SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEP 614
            K+HKN  + E+A  +++E+EP+N GY VL+SNIY+ AN    V  +R +MKE ++KK+P
Sbjct: 432 CKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDP 491

Query: 615 GFSSVEVNGLVHKFIRG 631
           G S VE+ G VH FI G
Sbjct: 492 GCSYVELKGRVHPFIVG 508



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 219/450 (48%), Gaps = 10/450 (2%)

Query: 21  IKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA 80
           +K H K    N ++  T +N+ +    K  +   AL++Y  M ++G   + FT P  LK+
Sbjct: 1   MKNHCKSKSMNALS--TPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKS 58

Query: 81  CAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLV-SARYLFDE--MPNRDV 137
           CA + +  LG + HG   K G   + +V   LI MY + GSLV +AR +F+E     +  
Sbjct: 59  CAALSLPILGSQFHGQITKVGCVFEPFVQTGLISMYCK-GSLVDNARKVFEENFHSRKLT 117

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
           V ++ ++ GY       EA+ + R+M    +  + V ++ ++       +++LG ++H  
Sbjct: 118 VCYNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCS 177

Query: 198 VVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN 257
            ++   D    V++    I MY KCG++ YA++LF+ +    ++SW  M+SGY +     
Sbjct: 178 TLKYGFDSD--VSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLAT 235

Query: 258 EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALV 317
             + L+  M    V P  +T++ ++  C  +G   +G  +   I  +GF  +  + NAL+
Sbjct: 236 NVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALI 295

Query: 318 DMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEV 377
           +MY +C  +  A+ +FDGM  + ++ W A+I  Y      + A +LF  M  S + P+  
Sbjct: 296 NMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGT 355

Query: 378 TMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-S 435
             V +LS C+ AG  + G ++         LE      + +VD+  + G +  A  L  S
Sbjct: 356 AFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIES 415

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
             I  D  +W A++    +H   E A + F
Sbjct: 416 MPIKPDGAVWGALLGACKIHKNVELAELAF 445



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 172/343 (50%), Gaps = 15/343 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+LV+ Y+ N+K S A+ ++  M + G  V++ T+  ++ AC   +   LG  +H   +
Sbjct: 120 YNALVSGYVSNSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTL 179

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G D D  V N  I MY +CGS+  A+ LFDEMP + ++SW+ M+ GY + GL    LE
Sbjct: 180 KYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLE 239

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATA 214
           + R M    + P  V ++ ++S  A++    +G  +        K +  G      +  A
Sbjct: 240 LYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEF------KIQASGFTSNPFLNNA 293

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LI+MY++CGNL  A+ +F+ + + ++VSWT +I GY         V+LF EMI   + P 
Sbjct: 294 LINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPD 353

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLF 333
               + ++  C   G    G      + RN   E      + +VD+ G+   ++ A+TL 
Sbjct: 354 GTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLI 413

Query: 334 DGMKSK-DVMIWNAVISA---YAQAHCIDKAFELFIHMKVSKV 372
           + M  K D  +W A++ A   +      + AFE  I ++   +
Sbjct: 414 ESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENI 456


>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 606

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 192/568 (33%), Positives = 312/568 (54%), Gaps = 14/568 (2%)

Query: 80  ACAQVLMTHLGKEIHGFAIKNGL---DGDAY--------VSNALIQMYSECGSLVSARYL 128
           AC++ L++        F+++N L     D          ++  LI+ Y + GS   A  L
Sbjct: 4   ACSRKLLSSTNFRPIPFSVQNSLRCIQNDTPFNPKDLTGLTTDLIKSYFDKGSFEEAHTL 63

Query: 129 FDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV 188
           FDEMP+RDV++W++MI GY        A  V   M    ++P+   + +++     +  +
Sbjct: 64  FDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKPNAFTVSAVLKACKSLKAL 123

Query: 189 DLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC-GNLAYAKQLFNRLNQNSVVSWTVMI 247
             GK +H   ++    +   + +  AL+DMY+ C  ++  A+ +F  +   + VSWT +I
Sbjct: 124 LCGKLVHGLAIK-IGTQGSSIYVDNALMDMYATCCDSMDNARLVFEDIGTKNAVSWTTLI 182

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           +GY    +   G+R+F +M  E    S  +    +  C  +G   LGK +HA ++ +GFE
Sbjct: 183 TGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQVHAAVINHGFE 242

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
            +L + NA++DMY +CR    A+ LF  M  KD + WN +I+ +      + +  +F  M
Sbjct: 243 SNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFETLDSYE-SLCIFSQM 301

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
                 PN  T   +++ C     L  G+ LH  I  +GL+ ++ L  AL+DMYAKCG+V
Sbjct: 302 VSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNV 361

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             ++++FS   + ++  W +MM GYG HG G+EA+  F +M  SG+KP+ I F+ +L+AC
Sbjct: 362 ADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSAC 421

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           SHAGLV EG   F  M     + P  + Y C+VDLL RAG + EA+E+I++MP +P+  +
Sbjct: 422 SHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSRAGRVKEAYELIENMPFKPDESI 481

Query: 548 WGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
           W ALL A K +K PS+ ++AA ++LE++P   G  VL+SN  A    W D A +R++M+ 
Sbjct: 482 WVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTYVLLSNFSAAEGNWADFASLRKLMRS 541

Query: 608 IRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
            + KKE G S +E+   V  FI G + +
Sbjct: 542 TKSKKEVGRSWIELKNQVCSFIVGDIFD 569



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/417 (29%), Positives = 221/417 (52%), Gaps = 7/417 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + S++T Y   N  S A N++  M ++G + + FT+  +LKAC  +     GK +HG AI
Sbjct: 75  WTSMITGYTSCNHHSRAWNVFTNMLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAI 134

Query: 99  KNGLDGDA-YVSNALIQMYSE-CGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
           K G  G + YV NAL+ MY+  C S+ +AR +F+++  ++ VSW+T+I GY         
Sbjct: 135 KIGTQGSSIYVDNALMDMYATCCDSMDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGG 194

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           L V R+M   +   S  +    VS  A +   +LGK +HA V+ +  +  L V    A++
Sbjct: 195 LRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQVHAAVINHGFESNLPV--MNAIL 252

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           DMY +C   + AKQLF  + Q   ++W  +I+G+   +   E + +F++M+ E   P+  
Sbjct: 253 DMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFETLDSY-ESLCIFSQMVSEGFSPNCF 311

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T  S+I  C  +  L  G+ LH  I+  G + +L ++NAL+DMY KC  +  +  +F GM
Sbjct: 312 TFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADSHKIFSGM 371

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG- 395
           +  +++ W +++  Y       +A +LF  M  S ++P+++  + +LS C+ AG ++ G 
Sbjct: 372 RHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGL 431

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAG 451
           ++         +  D  +   +VD+ ++ G V  AY L     ++ D  +W A++  
Sbjct: 432 RYFRLMTSYYNVAPDRDIYACVVDLLSRAGRVKEAYELIENMPFKPDESIWVALLGA 488



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 172/351 (49%), Gaps = 13/351 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+T Y         L ++  M     E+  F+    + ACA +  ++LGK++H   I
Sbjct: 178 WTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQVHAAVI 237

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +G + +  V NA++ MY  C     A+ LF EM  +D ++W+T+I G+       E+L 
Sbjct: 238 NHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFETLD-SYESLC 296

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M      P+     S+++  A++A +  G+ +H  ++    D  L   ++ ALIDM
Sbjct: 297 IFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNL--ELSNALIDM 354

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCGN+A + ++F+ +   ++VSWT M+ GY       E V LF EM+   + P +I  
Sbjct: 355 YAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVF 414

Query: 279 LSLIIECGFVG----GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           ++++  C   G    GL+  + + +Y           +   +VD+  +   ++ A  L +
Sbjct: 415 MAVLSACSHAGLVDEGLRYFRLMTSYY---NVAPDRDIYACVVDLLSRAGRVKEAYELIE 471

Query: 335 GMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            M  K D  IW A++ A  +      + +    +KV +++PN+     LLS
Sbjct: 472 NMPFKPDESIWVALLGACKKYK--QPSIQKLAALKVLEMKPNKAGTYVLLS 520


>gi|356540705|ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Glycine max]
          Length = 715

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 213/656 (32%), Positives = 352/656 (53%), Gaps = 39/656 (5%)

Query: 9   NLEQTRQCHAHIIKTHFKFS------YTNIINPLTR---------------------YNS 41
           +L + RQ HA I+ T   F+      Y NI++   R                     YN+
Sbjct: 25  SLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDKMPRRTIVSYNA 84

Query: 42  LVTSYIK--NNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           L+ +Y +   N   SAL +Y  M  NG    + T  ++L+A + +     G  +H    K
Sbjct: 85  LLAAYSRASPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWWFGSSLHAKGFK 144

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
            GL+ D  +  +L+ MYS CG L SA  +F +M +RD V+W+++I GY +    EE + +
Sbjct: 145 LGLN-DICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGYLKNNKIEEGIWL 203

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIATALIDM 218
             +M  +   P++     +++  + + D   G+ IHA  +VRN     L + +  AL+DM
Sbjct: 204 FIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVS---LDLHLQNALVDM 260

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP--SEI 276
           Y   GN+  A ++F+R+    +VSW  MI+GY    +  + + LF ++ +E  FP   + 
Sbjct: 261 YCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQL-QEMCFPKPDDY 319

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T   +I   G       GK LHA +++ GFE S+ + + LV MY K  E  +A  +F  +
Sbjct: 320 TYAGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDAAWRVFCSI 379

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             KDV++W  +I+ Y++      A   F  M       ++  + G+++ C     L  G+
Sbjct: 380 SVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACANLAVLRQGE 439

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H Y  K G +V++ +  +L+DMYAK G +  AY +FS+    D+  WN+M+ GY  HG
Sbjct: 440 IIHCYAVKLGYDVEMSVSGSLIDMYAKNGSLEAAYLVFSQVSEPDLKCWNSMLGGYSHHG 499

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             EEAL  F ++ + G+ P+ +TF+ LL+ACSH+ LV +GK +++ M + +GL+P ++HY
Sbjct: 500 MVEEALQVFEEILKQGLIPDQVTFLSLLSACSHSRLVEQGKFLWNYM-NSIGLIPGLKHY 558

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMP-LRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
            CMV L  RA LL+EA E+I   P +  N+ +W  LL+A  ++KN  +G  AA ++L ++
Sbjct: 559 SCMVTLFSRAALLEEAEEIINKSPYIEDNLELWRTLLSACVINKNFKVGIHAAEEVLRLK 618

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            ++    VL+SN+YA A +W+ VA +RR M+ + + K PG S +E    +H F  G
Sbjct: 619 AEDGPTLVLLSNLYAAARKWDKVAEIRRNMRGLMLDKYPGLSWIEAKNDIHVFSSG 674



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 132/492 (26%), Positives = 252/492 (51%), Gaps = 17/492 (3%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGL---DGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           ++L+ C+ V      +++H   +           +V N ++ MY+ CGSL  +  +FD+M
Sbjct: 15  SLLQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDKM 74

Query: 133 PNRDVVSWSTMIRGYHRGGLPE--EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
           P R +VS++ ++  Y R        ALE+  +M    +RPS     S++   + +     
Sbjct: 75  PRRTIVSYNALLAAYSRASPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWWF 134

Query: 191 GKAIHACVVRNCKDEKLG---VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           G ++HA      K  KLG   + + T+L++MYS CG+L+ A+ +F  +     V+W  +I
Sbjct: 135 GSSLHA------KGFKLGLNDICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLI 188

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
            GY++ N+I EG+ LF +M+     P++ T   ++  C  +   + G+ +HA+++     
Sbjct: 189 MGYLKNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVS 248

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             L + NALVDMY     +++A  +F  M++ D++ WN++I+ Y++    +KA  LF+ +
Sbjct: 249 LDLHLQNALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQL 308

Query: 368 K-VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           + +   +P++ T  G++S      +   GK LH  + K G E  V + + LV MY K  +
Sbjct: 309 QEMCFPKPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHE 368

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
            + A+R+F     +D+ +W  M+ GY     G  A+  F  M   G + +     G++NA
Sbjct: 369 SDAAWRVFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNA 428

Query: 487 CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
           C++  ++ +G+ +    V  LG   ++   G ++D+  + G L+ A+ ++ S    P++ 
Sbjct: 429 CANLAVLRQGEIIHCYAVK-LGYDVEMSVSGSLIDMYAKNGSLEAAY-LVFSQVSEPDLK 486

Query: 547 VWGALLAASKLH 558
            W ++L     H
Sbjct: 487 CWNSMLGGYSHH 498



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 164/321 (51%), Gaps = 21/321 (6%)

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEF---SLAMANALVDMYGKCREIRSARTLFDG 335
           LSL+ +C  V  L+  + LHA IL     F   S  + N ++ MY +C  +  +  +FD 
Sbjct: 14  LSLLQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDK 73

Query: 336 MKSKDVMIWNAVISAYAQA---HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           M  + ++ +NA+++AY++A   H I  A EL+  M  + +RP+  T   LL    +A +L
Sbjct: 74  MPRRTIVSYNALLAAYSRASPNHAI-SALELYTQMVTNGLRPSSTTFTSLL----QASSL 128

Query: 393 EMGKWLHTYIEKQGLEV---DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
               W  + +  +G ++   D+ L+T+L++MY+ CGD++ A  +F + + RD   WN+++
Sbjct: 129 LEHWWFGSSLHAKGFKLGLNDICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLI 188

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK-MVHGLG 508
            GY  +   EE +  F+ M   G  P   T+  +LN+CS       G+ +    +V  + 
Sbjct: 189 MGYLKNNKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVS 248

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
           L   +++   +VD+   AG +  A+ +   M   P+++ W +++A    +++        
Sbjct: 249 LDLHLQN--ALVDMYCNAGNMQTAYRIFSRME-NPDLVSWNSMIAGYSENEDGEKAMNLF 305

Query: 569 TQILEI---EPQNYGYNVLMS 586
            Q+ E+   +P +Y Y  ++S
Sbjct: 306 VQLQEMCFPKPDDYTYAGIIS 326


>gi|357148978|ref|XP_003574958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 598

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 188/591 (31%), Positives = 322/591 (54%), Gaps = 5/591 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N L+     +   S  L  Y  +   G   D  T P++ K+CA + +  LG  +H 
Sbjct: 10  LRHWNRLIQLAAASGSYSRCLRHYVPLLAAGLHGDASTFPSLAKSCAALRLPRLGCSVHA 69

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+  G   D +V  +L+ MY++C  L  AR LFDEMP+  ++SW+ M+  Y +     E
Sbjct: 70  HALLVGAASDVFVLTSLLDMYAKCACLPDARRLFDEMPSPTLISWNCMVTAYSKSSCVTE 129

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFAD-VADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           A+ +   MR + +RPS   ++ ++S   D ++  + G  ++   +++  D  L V    +
Sbjct: 130 AVAMFNTMRGVGVRPSGATLVGLLSGRVDSLSTRNPGLCLYGYSMKSGLDTDLPVL--NS 187

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           ++ M  + G L  A  LF+ +++ SVV+W+ M+SG+++  +  +   LF  M        
Sbjct: 188 VLTMLVRAGQLYDACLLFDSMHEKSVVTWSAMVSGFLQTGDYMKVFGLFNHMQTAGYKFD 247

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            + +++LI     +G L + K +HA ++++GFE    + ++LV++Y KC ++ +A+ +FD
Sbjct: 248 SVALVNLISAAVLLGNLLVAKGVHALLIKSGFESEQDLMSSLVNLYAKCGDLEAAQEVFD 307

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            +  K+V++W ++IS YA+    DKA ++F  M  + V PNE T+  +LS C   G+   
Sbjct: 308 AVHRKNVVLWTSMISGYAEGGHPDKALKMFDSMLCTDVEPNEATVSSVLSACANLGSANQ 367

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS--EAIYRDICMWNAMMAGY 452
            K +  ++   GL+ D+ + T L+D Y KCG+V  A  +F       RD+ +W+AM+ GY
Sbjct: 368 AKKVEDHVVAIGLQKDLRVATGLIDTYCKCGNVTLAREIFDGVTTTNRDLAIWSAMINGY 427

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
              G G EAL+ F +M+  GV+P+ I F  LL AC+++GLV EG   F  +    G+ P 
Sbjct: 428 ACIGEGSEALVLFNEMQNQGVQPDAIVFTHLLTACNYSGLVDEGLQCFRSLTVEYGIEPS 487

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           IEHY C +DLL +AG L  A E  + +P++    V   +L A   H   S  E+ + ++L
Sbjct: 488 IEHYMCTIDLLCKAGHLSAAKEFFRKIPIQLQNQVLAPILTAYSAHCADSSIELVSEELL 547

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
            +EP N  + VLM+N+     +W      RR++ +  + KEPG S +E++G
Sbjct: 548 NLEPHNSDHCVLMANMLNCLGKWKKATDYRRLITKQGLVKEPGRSCIEMSG 598


>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
 gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
          Length = 684

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 183/523 (34%), Positives = 301/523 (57%), Gaps = 10/523 (1%)

Query: 111 ALIQMYSECGSLVSARYLFDEMPNRD--VVSWSTMIRGYHRGGLPEEALEVMREMRFMDI 168
           +L   Y+  G+L +A       P+    + +W+ ++    R G P  AL V R +     
Sbjct: 49  SLAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVFRALP-SSA 107

Query: 169 RPSEVAMISMVSLFADVADVDLGKAIH--ACVVRNCKDEKLGVAIATALIDMYSKCGNLA 226
           RP        ++  A + D+D  +A+   A      +D    V + +AL+ +YS+CG + 
Sbjct: 108 RPDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRD----VFVCSALLHVYSRCGAMG 163

Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
            A ++F+ + +   V+W+ M++G++      E + +++ M E  V   E+ ++ +I  C 
Sbjct: 164 DAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACT 223

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
             G  ++G  +H   LR+G    + +A +LVDMY K      AR +F  M  ++ + WNA
Sbjct: 224 LTGNTRMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNA 283

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           +IS +AQ    D+A +LF  M  S ++P+   +V  L  C + G L++GK +H +I ++ 
Sbjct: 284 LISGFAQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRR- 342

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
           LE   IL TA++DMY+KCG +  A +LF++   RD+ +WNAM+A  G HGCG +AL  F 
Sbjct: 343 LEFQCILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQ 402

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRA 526
           ++  +G+KP+  TF  LL+A SH+GLV EGK  FD+M+   G+ P  +H  C+VDLL R+
Sbjct: 403 ELNETGIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARS 462

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMS 586
           GL++EA+EM+ SM   P + +W ALL+    +K   +GE  A +ILE +P++ G   L+S
Sbjct: 463 GLVEEANEMLASMHTEPTIPIWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVS 522

Query: 587 NIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           N+YA A +W+ V  +R++MK+   KK PG+S +EV+G  H F+
Sbjct: 523 NLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLIEVHGTRHAFV 565



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 221/415 (53%), Gaps = 6/415 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+ +  +   P +AL ++  +  + +  D+ T    L ACA++      + +   A 
Sbjct: 80  WNALLAARSRAGSPGAALRVFRAL-PSSARPDSTTFTLALTACARLGDLDAAEAVRVRAF 138

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G   D +V +AL+ +YS CG++  A  +FD MP +D V+WSTM+ G+   G P EAL 
Sbjct: 139 AAGYGRDVFVCSALLHVYSRCGAMGDAIRVFDGMPRKDHVAWSTMVAGFVSAGRPVEALG 198

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   MR   +   EV M+ ++       +  +G ++H   +R+    ++ V IAT+L+DM
Sbjct: 199 MYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFLRH--GMRMDVVIATSLVDM 256

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G+   A+Q+F  +   + VSW  +ISG+ +    +E + LF EM    + P    +
Sbjct: 257 YAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALDLFREMSTSGLQPDSGAL 316

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           +S ++ C  VG L+LGK +H +ILR   EF   +  A++DMY KC  + SAR LF+ + S
Sbjct: 317 VSALLACADVGFLKLGKSIHGFILRR-LEFQCILGTAVLDMYSKCGSLESARKLFNKLSS 375

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-W 397
           +D+++WNA+I+      C   A  LF  +  + ++P+  T   LLS  + +G +E GK W
Sbjct: 376 RDLVLWNAMIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFW 435

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAG 451
               I + G+E        +VD+ A+ G V  A  +  S      I +W A+++G
Sbjct: 436 FDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLASMHTEPTIPIWVALLSG 490



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 191/353 (54%), Gaps = 17/353 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           ++++V  ++   +P  AL +Y+ MR++G   D   +  +++AC     T +G  +HG  +
Sbjct: 180 WSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNTRMGASVHGRFL 239

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++G+  D  ++ +L+ MY++ G    AR +F  MP R+ VSW+ +I G+ + G  +EAL+
Sbjct: 240 RHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGFAQNGHADEALD 299

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + REM    ++P   A++S +   ADV  + LGK+IH  ++R  + + +   + TA++DM
Sbjct: 300 LFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRRLEFQCI---LGTAVLDM 356

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMIS--GYIRCNEINEGVRLFAEMIEENVFPSEI 276
           YSKCG+L  A++LFN+L+   +V W  MI+  G   C   ++ + LF E+ E  + P   
Sbjct: 357 YSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCG--HDALALFQELNETGIKPDHA 414

Query: 277 TILSLIIECGFVGGLQLGK-WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           T  SL+      G ++ GK W    I   G E +      +VD+  +   +  A  +   
Sbjct: 415 TFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLVEEANEMLAS 474

Query: 336 MKSKDVM-IWNAVISAYAQAHCI-DKAFEL--FIHMKVSKVRPNEVTMVGLLS 384
           M ++  + IW A++S      C+ +K  EL   I  K+ + +P ++ ++ L+S
Sbjct: 475 MHTEPTIPIWVALLSG-----CLNNKKLELGETIAKKILESQPEDIGVLALVS 522


>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
          Length = 648

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 183/462 (39%), Positives = 273/462 (59%), Gaps = 37/462 (8%)

Query: 205 EKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
           +KLG    V +  A +  +S  G +A+A++LF+      VVSW  +I GY+R     E +
Sbjct: 148 QKLGFSADVFVVNAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREAL 207

Query: 261 RLFAEMIEEN--VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
            LF  + E+   V P E+T++  +  C  +G L+LGK LH ++   G   ++ + NA++D
Sbjct: 208 ELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMD 267

Query: 319 MYGKCREIR-------------------------------SARTLFDGMKSKDVMIWNAV 347
           MY KC  +                                 AR LFD M  +DV  WNA+
Sbjct: 268 MYVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNAL 327

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           ++ Y Q     +A  LF  M+ SKV PNE+TMV LLS C++ GALEMG W+H YI++  L
Sbjct: 328 MAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKL 387

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
            + V L T+LVDMYAKCG++  A  +F+E   ++   W +M+ G   HG  +EA+ +F  
Sbjct: 388 HLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQR 447

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           M   G++P+ ITFIG+L+AC HAGLV  G+  F  M     L  K++HY CM+DLLGRAG
Sbjct: 448 MIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAG 507

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSN 587
            LDEA +++ +MP+ P+ +VWGAL  A ++H N ++GE AA +++E++P + G  VL++N
Sbjct: 508 HLDEAEQLVNAMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLAN 567

Query: 588 IYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +YA AN       VR +M+ + V+K PG S +E+NG+VH+FI
Sbjct: 568 MYAEANMRKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFI 609



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 160/493 (32%), Positives = 254/493 (51%), Gaps = 49/493 (9%)

Query: 60  AFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSEC 119
           A +    +  D+ T P ++KACA++     G  + G   K G   D +V NA +  +S  
Sbjct: 110 ALLHSGSARPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMHFWSVR 169

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD----IRPSEVAM 175
           G +  AR LFDE P RDVVSW+T+I GY R GLP EALE+    R  +    +RP EV +
Sbjct: 170 GPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELF--WRLAEDGNAVRPDEVTV 227

Query: 176 ISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL 235
           I  VS  A + D++LGK +H  V  + K  +  V +  A++DMY KCG+L  A  +F R+
Sbjct: 228 IGAVSGCAQMGDLELGKRLHEFV--DNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERI 285

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF----------------------- 272
           +  + VSWT MI G+ R   + +   LF EM E +VF                       
Sbjct: 286 SNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFH 345

Query: 273 --------PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
                   P+EIT+++L+  C  +G L++G W+H YI R+    S+A+  +LVDMY KC 
Sbjct: 346 EMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCG 405

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            I+ A  +F+ +  ++ + W ++I   A     D+A E F  M    ++P+E+T +G+LS
Sbjct: 406 NIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLS 465

Query: 385 LCTEAGALEMGKWLHTYIE-KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDI 442
            C  AG +E G+   + +  K  LE  +   + ++D+  + G ++ A +L +   +  D 
Sbjct: 466 ACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDA 525

Query: 443 CMWNAMMAGYGMHG---CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
            +W A+     MHG    GE+A +  V+++ S    +GI ++ L N  + A +  +   V
Sbjct: 526 VVWGALFFACRMHGNITLGEKAAMKLVELDPSD---SGI-YVLLANMYAEANMRKKADKV 581

Query: 500 FDKMVH-GLGLVP 511
              M H G+  VP
Sbjct: 582 RVMMRHLGVEKVP 594



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 175/353 (49%), Gaps = 37/353 (10%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLG 90
           +  +  +N+L+  Y+++  P  AL ++  + ++G+ V  D  T+   +  CAQ+    LG
Sbjct: 184 VRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELG 243

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           K +H F    G+     + NA++ MY +CGSL  A  +F+ + NR  VSW+TMI G+ R 
Sbjct: 244 KRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARL 303

Query: 151 G-----------LPE--------------------EALEVMREMRFMDIRPSEVAMISMV 179
           G           +PE                    EA+ +  EM+   + P+E+ M++++
Sbjct: 304 GMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLL 363

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
           S  + +  +++G  +H  + R+     L VA+ T+L+DMY+KCGN+  A  +FN +   +
Sbjct: 364 SACSQLGALEMGMWVHHYIDRH--KLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQN 421

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
            ++WT MI G       +E +  F  MI+  + P EIT + ++  C   G ++ G+   +
Sbjct: 422 ALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFS 481

Query: 300 YI-LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
            +  +   E  +   + ++D+ G+   +  A  L + M    D ++W A+  A
Sbjct: 482 LMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNAMPMDPDAVVWGALFFA 534



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 124/242 (51%), Gaps = 2/242 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+  Y++N +   A+ ++  M+K+  + +  T+  +L AC+Q+    +G  +H +  
Sbjct: 324 WNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYID 383

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++ L     +  +L+ MY++CG++  A  +F+E+P ++ ++W++MI G    G  +EA+E
Sbjct: 384 RHKLHLSVALGTSLVDMYAKCGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIE 443

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             + M  + ++P E+  I ++S       V+ G+   + +      E+  +   + +ID+
Sbjct: 444 YFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLER-KMKHYSCMIDL 502

Query: 219 YSKCGNLAYAKQLFNRLNQN-SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
             + G+L  A+QL N +  +   V W  +         I  G +   +++E +   S I 
Sbjct: 503 LGRAGHLDEAEQLVNAMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIY 562

Query: 278 IL 279
           +L
Sbjct: 563 VL 564



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 11/235 (4%)

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
           HC+   +   +H      RP+ +T   L+  C        G  +  +++K G   DV + 
Sbjct: 103 HCL-PLYRALLH--SGSARPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVV 159

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG-- 472
            A +  ++  G +  A RLF E+  RD+  WN ++ GY   G   EAL  F  +   G  
Sbjct: 160 NAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNA 219

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
           V+P+ +T IG ++ C+  G +  GK + +  V   G+   +     ++D+  + G L+ A
Sbjct: 220 VRPDEVTVIGAVSGCAQMGDLELGKRLHE-FVDNKGVRCTVRLMNAVMDMYVKCGSLELA 278

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN-YGYNVLMS 586
           + + + +  R   + W  ++     H    M E A     E+  ++ + +N LM+
Sbjct: 279 NSVFERISNR-TAVSWTTMIVG---HARLGMMEDARMLFDEMPERDVFPWNALMA 329


>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 196/594 (32%), Positives = 320/594 (53%), Gaps = 48/594 (8%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           +S+ TS++ +  P   ++  A      S++   T+  +  + +   + +L  ++H   ++
Sbjct: 2   SSISTSHLPS--PFKPVDFSAEKNIPTSKLPQKTVLKLFDSKSITSLQYL-TQLHALVLR 58

Query: 100 NGLDGDAYVSNALIQMYS--ECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +G   D YVS AL++ Y+     +   A  +F  +PN +V  W+ +I+G        +A+
Sbjct: 59  SGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAI 118

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
                M  +D RP++    ++    +    V  G+ IH  VV++       V I +A I 
Sbjct: 119 YFYGRM-VIDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSD--VHIKSAGIQ 175

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+  G L  A+++F    ++ VV W  MI GY++C  +     LFA+M  +N+      
Sbjct: 176 MYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNI------ 228

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
                           G W                 N +++   K   +  AR LFD M 
Sbjct: 229 ----------------GSW-----------------NVMINGLAKGGNLGDARKLFDEMS 255

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +D + W++++  Y  A    +A E+F  M+  + RP    +  +L+ C+  GA++ G+W
Sbjct: 256 ERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRW 315

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H Y+++  +++D +L TAL+DMYAKCG ++  + +F E   R+I  WNAM+ G  +HG 
Sbjct: 316 VHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGGLAIHGR 375

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            E+AL  F  ++   +KPNGIT +G+L AC+HAG V +G  +F  M    G+ P++EHYG
Sbjct: 376 AEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYG 435

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLLGR+GL  EA ++I SMP++PN  VWGALL A ++H N  + E     +LE+EPQ
Sbjct: 436 CMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQ 495

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           N G  VL+SNIYA   R++DV+ +R++MK   +K  PG S V++NG VH+F  G
Sbjct: 496 NSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHEFKMG 549



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 191/406 (47%), Gaps = 76/406 (18%)

Query: 15  QCHAHIIKTHFKFS---YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVD 70
           +C+A+   ++F F+   +++I NP +  +N ++   ++NNK   A+  Y  M  + +  +
Sbjct: 73  KCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVID-ARPN 131

Query: 71  NFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYS------------- 117
            FT PT+ KAC+       G++IHG  +K+G+  D ++ +A IQMY+             
Sbjct: 132 KFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFY 191

Query: 118 -----------------ECGSLVSARYLFDEMP--------------------------- 133
                            +CG L +A+ LF +MP                           
Sbjct: 192 SGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLF 251

Query: 134 ----NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
                RD +SWS+M+ GY   G  +EALE+ ++M+  + RP    + S+++  +++  +D
Sbjct: 252 DEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAID 311

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
            G+ +HA + RN    KL   + TAL+DMY+KCG L    ++F  + +  + +W  MI G
Sbjct: 312 QGRWVHAYLKRNSI--KLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIGG 369

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG----GLQLGKWLHAYILRNG 305
                   + + LF+++ E  + P+ IT++ ++  C   G    GL++ + +  +    G
Sbjct: 370 LAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFY---G 426

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISA 350
            +  L     +VD+ G+      A  L + M  K +  +W A++ A
Sbjct: 427 VDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGA 472


>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
 gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
          Length = 605

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 207/609 (33%), Positives = 337/609 (55%), Gaps = 17/609 (2%)

Query: 14  RQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN-F 72
           R C +     +FK+S     +P  +  S +  + K+   + AL++   +    S ++   
Sbjct: 7   RHCSSSFTSQNFKYS----THPSIKL-SQILQFCKSGLLNDALHLLNSIDLYDSRINKPL 61

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS-LVSARYLFDE 131
              ++L+ C +V     G++ H   +K+GL+ D +V N+L+ +Y + GS  +  R +FD 
Sbjct: 62  LYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDG 121

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           +  +DVVSW++MI GY R G    A+E+  +M    I P+   + +++   +++ ++ LG
Sbjct: 122 LFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLG 181

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           K  H  VVR   D      I ++LIDMY +    + A+QLF+ L +   V WT +IS + 
Sbjct: 182 KCFHGVVVRRGFDSN--PVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFT 239

Query: 252 RCNEINEGVRLF-AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
           R +   E +  F  +     + P   T  S++  CG +G L+ G+ +HA ++  GF  ++
Sbjct: 240 RNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNV 299

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
              ++LVDMYGKC  +  ++ LFD M +++ + W+A+++ Y      +KA  LF  MK  
Sbjct: 300 VTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMK-- 357

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLH-TYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
               +  +   ++  C    A+  GK +H  YI K G   DVI+++ALVD+YAKCG +N 
Sbjct: 358 --EVDLYSFGTVIRACAGLAAVTPGKEIHCQYIRKGGWR-DVIVESALVDLYAKCGCINF 414

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           AYR+F     R++  WN+M+ G+  +G    A+  F  M + G+KP+ I+FIGLL ACSH
Sbjct: 415 AYRVFDRMPTRNLITWNSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSH 474

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
            GLV + +  FD M    G+ P +EHY CMVDLLGRAGLL+EA  +I++   R +  +W 
Sbjct: 475 TGLVDQARHYFDLMTGKYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWL 534

Query: 550 ALLAA-SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
            LL A +    N +  E  A +++E+EPQ Y   V ++N+Y    RW+D   VR +MK  
Sbjct: 535 VLLGACTTTCTNSATAERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNR 594

Query: 609 RVKKEPGFS 617
           ++KK PG S
Sbjct: 595 QLKKMPGQS 603


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 195/620 (31%), Positives = 323/620 (52%), Gaps = 73/620 (11%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           ++LK C +       K++H   +K     + ++SN LI  Y + G+L  A ++FD +P  
Sbjct: 10  SLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQP 69

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMD---------------------------- 167
           ++ SW+T++  Y + GL  +  ++   M F D                            
Sbjct: 70  NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129

Query: 168 ----IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMY 219
               +  + +   +M+ L +    VDLG+ I+  ++      K G    V + + L+DMY
Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQIL------KFGFGSDVFVGSPLVDMY 183

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP------ 273
           +K G +  AK+ F+ + + +VV    MI+G +RC  I E  RLF  + E +         
Sbjct: 184 TKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMIT 243

Query: 274 -------------------------SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
                                     + T  S++  CG +  L  GK +HAY++R   + 
Sbjct: 244 GLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKD 303

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
           ++ + +ALVDMY KCR I+SA T+F  M  K+V+ W A++  Y Q    ++A ++F  M+
Sbjct: 304 NVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQ 363

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
            + V P++ T+  ++S C    +LE G   H      GL   + +  AL+ +Y KCG   
Sbjct: 364 RNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTE 423

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            ++RLF+E   RD   W A++AGY   G   E +  F  M   G+KP+G+TFIG+L+ACS
Sbjct: 424 NSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACS 483

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
            AGLV +G   F+ M+   G++P ++H  C++DLLGRAG L+EA   I +MP  P+++ W
Sbjct: 484 RAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGW 543

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
             LL++ ++H +  +G+ AA  ++ +EPQN    VL+S++YA   +W+ VA +RR M++ 
Sbjct: 544 ATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDK 603

Query: 609 RVKKEPGFSSVEVNGLVHKF 628
           RV+KEPG+S ++  G VH F
Sbjct: 604 RVRKEPGYSWIKYKGKVHVF 623



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 227/452 (50%), Gaps = 36/452 (7%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +N  ++ Y      S A+ +Y  M K+ +  ++  T  T+L  C++     LG++I+G  
Sbjct: 105 WNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQI 164

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVV------------------- 138
           +K G   D +V + L+ MY++ G +  A+  FDEMP R+VV                   
Sbjct: 165 LKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQ 224

Query: 139 ------------SWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
                       SW+ MI G  + GL  EAL++ REMR       +    S+++    + 
Sbjct: 225 RLFCGLKERDSISWTIMITGLMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLL 284

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
            +  GK IHA V+R   D K  V + +AL+DMYSKC ++  A+ +F R+ Q +V+SWT M
Sbjct: 285 ALGEGKQIHAYVIRT--DHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAM 342

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           + GY +     E V++F EM    V P + T+ S+I  C  +  L+ G   H   L +G 
Sbjct: 343 LVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGL 402

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
              + ++NAL+ +YGKC    ++  LF  M  +D + W A+++ YAQ    ++   LF  
Sbjct: 403 ISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFER 462

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
           M    ++P+ VT +G+LS C+ AG +E G ++  + I++ G+   V   T ++D+  + G
Sbjct: 463 MLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAG 522

Query: 426 DVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
            +  A    +    + D+  W  +++   +HG
Sbjct: 523 RLEEARNFINNMPCHPDVVGWATLLSSCRVHG 554



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 126/267 (47%), Gaps = 26/267 (9%)

Query: 7   FLNLEQTRQCHAHIIKTHFK---FSYTNIINPLTR---------------------YNSL 42
            L L + +Q HA++I+T  K   F  + +++  ++                     + ++
Sbjct: 283 LLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAM 342

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           +  Y +N     A+ I+  M++NG E D+FT+ +++ +CA +     G + H  A+ +GL
Sbjct: 343 LVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGL 402

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
                VSNALI +Y +CGS  ++  LF EM  RD VSW+ ++ GY + G   E + +   
Sbjct: 403 ISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFER 462

Query: 163 MRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC 222
           M    ++P  V  I ++S  +    V+ G      +++      + V   T +ID+  + 
Sbjct: 463 MLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPI-VDHCTCIIDLLGRA 521

Query: 223 GNLAYAKQLFNRLN-QNSVVSWTVMIS 248
           G L  A+   N +     VV W  ++S
Sbjct: 522 GRLEEARNFINNMPCHPDVVGWATLLS 548


>gi|449444600|ref|XP_004140062.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17210-like [Cucumis sativus]
          Length = 747

 Score =  349 bits (895), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 191/565 (33%), Positives = 327/565 (57%), Gaps = 12/565 (2%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR- 135
           +++A  ++ +   G   HG+  ++G      V N+L+ +Y+E   +  A  LF EM  R 
Sbjct: 154 VIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAHKLFGEMSVRN 212

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           DVVSWS MI G+ + G  E+   + R M     I P  V ++S++    ++ D+ LG  +
Sbjct: 213 DVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMV 272

Query: 195 HACVV-RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           H  V+ R  +D+   + +  +LIDMYSKC N+  A + F  + + +++SW +M+S YI  
Sbjct: 273 HGLVIFRGLEDD---LFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAYILN 329

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLI-IECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
               E + L   M+ E     E+T+ +++ I   F+  L+  + +H  I+R G+E +  +
Sbjct: 330 ESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKC-RSVHGVIIRKGYESNELL 388

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV 372
            N+++D Y KC  +  AR +FDGM  KDV+ W+ +I+ +A+    D+A  +F  M   +V
Sbjct: 389 LNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQMN-EEV 447

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR 432
            PN V+++ L+  C  +  L   KW H    ++GL  +V + T+++DMY+KCGD+  + R
Sbjct: 448 IPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASEVDIGTSIIDMYSKCGDIEASIR 507

Query: 433 LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL 492
            F++   +++  W+AM++ + ++G   EAL+ F  ++++G KPN +T + LL+ACSH GL
Sbjct: 508 AFNQIPQKNVVCWSAMISAFRINGLAHEALMLFEKIKQNGTKPNAVTALSLLSACSHGGL 567

Query: 493 VTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP--LRPNMIVWGA 550
           + EG S F  MV   G+ P +EHY C+VD+L RAG  +EA E+I+ +P  +     +WG 
Sbjct: 568 MEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELIEKLPKEMEAGASIWGT 627

Query: 551 LLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRV 610
           LL++ + + N S+G  AA+++L++EP +    +L SN+YA      D A +RR+ KE  V
Sbjct: 628 LLSSCRSYGNISLGSGAASRVLQLEPLSSAGYMLASNLYANCGLMIDSAKMRRLAKEKGV 687

Query: 611 KKEPGFSSVEVNGLVHKFIRGGMVN 635
           K   G+S V +N    +F+ G ++N
Sbjct: 688 KVVAGYSLVHINSQTWRFVAGDVLN 712



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/511 (27%), Positives = 265/511 (51%), Gaps = 18/511 (3%)

Query: 55  ALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALI 113
           AL +Y  +R +G+++ D + +P+ILKAC+     +LG  +HG  IK G      ++N+ I
Sbjct: 31  ALQLYHEIRISGAQLSDTWVLPSILKACSNTSF-NLGTAMHGCLIKQGCQSSTSIANSTI 89

Query: 114 QMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEV 173
             Y + G L SA+  FD   N+D VSW+ M+ G    G     L    + RF   +P+  
Sbjct: 90  DFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNIS 149

Query: 174 AMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFN 233
           +++ ++  F ++     G A H  + R+     L  ++  +L+ +Y++  ++ +A +LF 
Sbjct: 150 SLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAIL--SVQNSLLSLYAEV-HMYFAHKLFG 206

Query: 234 RLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPSEITILSLIIECGFVGGL 291
            ++ +N VVSW+VMI G+++  E  +G  +F  M+ E  + P  +T++S++  C  +  +
Sbjct: 207 EMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDI 266

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
            LG  +H  ++  G E  L + N+L+DMY KC  + SA   F  +  K+++ WN ++SAY
Sbjct: 267 SLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIPEKNIISWNLMLSAY 326

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
                  +A  L   M       +EVT+  +L +          + +H  I ++G E + 
Sbjct: 327 ILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHGVIIRKGYESNE 386

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
           +L  +++D YAKC  V  A  +F     +D+  W+ M+AG+  +G  +EA+  F  M   
Sbjct: 387 LLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDEAISVFKQMNEE 446

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAG 527
            V PN ++ + L+ AC+ +  + +      K  HG+    GL  +++    ++D+  + G
Sbjct: 447 -VIPNNVSIMNLMEACAVSAELRQ-----SKWAHGIAVRRGLASEVDIGTSIIDMYSKCG 500

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            ++ +      +P + N++ W A+++A +++
Sbjct: 501 DIEASIRAFNQIP-QKNVVCWSAMISAFRIN 530



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 230/438 (52%), Gaps = 9/438 (2%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYA 60
           + ++N  L+L        H+   H  F   ++ N +  ++ ++  +++  +      ++ 
Sbjct: 183 LSVQNSLLSL----YAEVHMYFAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFR 238

Query: 61  FM-RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSEC 119
            M  + G   D  T+ ++LKAC  +    LG  +HG  I  GL+ D +V N+LI MYS+C
Sbjct: 239 NMVTEAGIPPDGVTVVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKC 298

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV 179
            ++ SA   F E+P ++++SW+ M+  Y       EAL ++  M        EV + +++
Sbjct: 299 FNVHSAFKAFKEIPEKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVL 358

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
            +     D    +++H  ++R  K  +    +  ++ID Y+KC  +  A+ +F+ +N+  
Sbjct: 359 QIAKHFLDSLKCRSVHGVIIR--KGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKD 416

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
           VV+W+ MI+G+ R  + +E + +F +M EE V P+ ++I++L+  C     L+  KW H 
Sbjct: 417 VVAWSTMIAGFARNGKPDEAISVFKQMNEE-VIPNNVSIMNLMEACAVSAELRQSKWAHG 475

Query: 300 YILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
             +R G    + +  +++DMY KC +I ++   F+ +  K+V+ W+A+ISA+       +
Sbjct: 476 IAVRRGLASEVDIGTSIIDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAFRINGLAHE 535

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALV 418
           A  LF  +K +  +PN VT + LLS C+  G +E G  +  + ++K G+E  +   + +V
Sbjct: 536 ALMLFEKIKQNGTKPNAVTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEHYSCIV 595

Query: 419 DMYAKCGDVNGAYRLFSE 436
           DM ++ G  N A  L  +
Sbjct: 596 DMLSRAGKFNEALELIEK 613



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 175/320 (54%), Gaps = 9/320 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N ++++YI N     AL +   M + G+E D  T+  +L+     L +   + +HG
Sbjct: 316 IISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSVHG 375

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             I+ G + +  + N++I  Y++C  +  AR +FD M  +DVV+WSTMI G+ R G P+E
Sbjct: 376 VIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMNKKDVVAWSTMIAGFARNGKPDE 435

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+ V ++M   ++ P+ V++++++   A  A++   K  H   VR     +  V I T++
Sbjct: 436 AISVFKQMN-EEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRRGLASE--VDIGTSI 492

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI-NEGVRLFAEMIEENVFPS 274
           IDMYSKCG++  + + FN++ Q +VV W+ MIS + R N + +E + LF ++ +    P+
Sbjct: 493 IDMYSKCGDIEASIRAFNQIPQKNVVCWSAMISAF-RINGLAHEALMLFEKIKQNGTKPN 551

Query: 275 EITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
            +T LSL+  C   G ++ G  +  + + ++G E  L   + +VDM  +  +   A  L 
Sbjct: 552 AVTALSLLSACSHGGLMEEGLSFFTSMVQKHGIEPGLEHYSCIVDMLSRAGKFNEALELI 611

Query: 334 DGMKSK---DVMIWNAVISA 350
           + +  +      IW  ++S+
Sbjct: 612 EKLPKEMEAGASIWGTLLSS 631



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 218/474 (45%), Gaps = 22/474 (4%)

Query: 142 TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN 201
           + I+     G  +EAL++  E+R    + S+  ++  +         +LG A+H C+++ 
Sbjct: 17  SKIKDASYSGNWQEALQLYHEIRISGAQLSDTWVLPSILKACSNTSFNLGTAMHGCLIKQ 76

Query: 202 -CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
            C+      +IA + ID Y K G+L  A++ F+       VSW VM+ G      I  G+
Sbjct: 77  GCQSS---TSIANSTIDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGL 133

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
             F +    +  P+  ++L +I     +     G   H YI R+GF   L++ N+L+ +Y
Sbjct: 134 CWFIKGRFAHFQPNISSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLY 193

Query: 321 GKCREIRSARTLFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKV-SKVRPNEVT 378
            +   +  A  LF  M  + DV+ W+ +I  + Q    ++ F +F +M   + + P+ VT
Sbjct: 194 AEVH-MYFAHKLFGEMSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVT 252

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
           +V +L  CT    + +G  +H  +  +GLE D+ +  +L+DMY+KC +V+ A++ F E  
Sbjct: 253 VVSVLKACTNLKDISLGTMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIP 312

Query: 439 YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKS 498
            ++I  WN M++ Y ++    EAL     M R G + + +T   +L    H        S
Sbjct: 313 EKNIISWNLMLSAYILNESHLEALALLGTMVREGAEKDEVTLANVLQIAKHF-----LDS 367

Query: 499 VFDKMVHGLGLVPKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +  + VHG+ +    E        ++D   +  L++ A  +   M  + +++ W  ++A 
Sbjct: 368 LKCRSVHGVIIRKGYESNELLLNSVIDAYAKCNLVELARMVFDGMN-KKDVVAWSTMIAG 426

Query: 555 SKLHKNPSMGEIAATQI-LEIEPQNYGYNVLMSNIYAVA----NRWNDVAGVRR 603
              +  P        Q+  E+ P N     LM      A    ++W     VRR
Sbjct: 427 FARNGKPDEAISVFKQMNEEVIPNNVSIMNLMEACAVSAELRQSKWAHGIAVRR 480



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 165/354 (46%), Gaps = 15/354 (4%)

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
            E ++L+ E+       S+  +L  I++        LG  +H  +++ G + S ++AN+ 
Sbjct: 29  QEALQLYHEIRISGAQLSDTWVLPSILKACSNTSFNLGTAMHGCLIKQGCQSSTSIANST 88

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           +D Y K  ++ SA+  FD  K+KD + WN ++        I      FI  + +  +PN 
Sbjct: 89  IDFYMKYGDLDSAQRAFDSTKNKDSVSWNVMVHGNFSNGSIMAGLCWFIKGRFAHFQPNI 148

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
            +++ ++    E      G   H YI + G    + ++ +L+ +YA+   +  A++LF E
Sbjct: 149 SSLLLVIQAFRELKIYSQGFAFHGYIFRSGFSAILSVQNSLLSLYAEV-HMYFAHKLFGE 207

Query: 437 -AIYRDICMWNAMMAGYGMHGCGEEALIFFVDM-ERSGVKPNGITFIGLLNACSHAGLVT 494
            ++  D+  W+ M+ G+   G  E+  + F +M   +G+ P+G+T + +L AC++   ++
Sbjct: 208 MSVRNDVVSWSVMIGGFVQIGEDEQGFLMFRNMVTEAGIPPDGVTVVSVLKACTNLKDIS 267

Query: 495 EGKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
            G      MVHGL    GL   +     ++D+  +   +  A +  K +P   N+I W  
Sbjct: 268 LG-----TMVHGLVIFRGLEDDLFVGNSLIDMYSKCFNVHSAFKAFKEIP-EKNIISWNL 321

Query: 551 LLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRV 604
           +L+A  L  N S  E  A     +        V ++N+  +A  + D    R V
Sbjct: 322 MLSAYIL--NESHLEALALLGTMVREGAEKDEVTLANVLQIAKHFLDSLKCRSV 373


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  348 bits (894), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 192/547 (35%), Positives = 310/547 (56%), Gaps = 21/547 (3%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSE--CGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           +++H F++K  +    +VS+ L+ +YS+     L  AR +FD +  R ++ W+T+I+ Y 
Sbjct: 30  EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYV 89

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
                 + + +  E+   +  P    +  ++   A +  V  GK IH   +      K+G
Sbjct: 90  ENQFSHDGIVLFHEL-VHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLAL------KIG 142

Query: 209 ----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
               V +  +L++MYSKCG +  A+++F+ +    VV W  +I GY RC EI+  ++LF 
Sbjct: 143 FGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFE 202

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           EM E + F S   ++  + +CG V   +  K       RN     L   NA+++ Y K  
Sbjct: 203 EMPERDAF-SWTVLVDGLSKCGKVESAR--KLFDQMPCRN-----LVSWNAMINGYMKSG 254

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
           +  SA  LF  M   D++ WN +I+ Y        A ++F  M     RP+  T+V +LS
Sbjct: 255 DFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLS 314

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
             +    L  G+W+H+Y+EK G E+D IL T+L++MYAKCG +  A  +F     + +  
Sbjct: 315 AVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGH 374

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           W A++ G G+HG    AL  F++M ++G+KPN I FIG+LNAC+HAGLV +G+  FD M+
Sbjct: 375 WTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMM 434

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
           +   + P +EHYGC+VD+L RAG L+EA   I++MP+ PN ++W +LL  S+ H    +G
Sbjct: 435 NEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIG 494

Query: 565 EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
           E AA +++E+ P+  G  +L+SN+YA +  W  V+ VR +M +   +K+PG SSVE  G 
Sbjct: 495 EYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGT 554

Query: 625 VHKFIRG 631
           +H+FI G
Sbjct: 555 LHEFIVG 561



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 219/423 (51%), Gaps = 13/423 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++  Y++N      + ++  +       DNFT+P ++K CA++ +   GK+IHG
Sbjct: 78  LIHWNTIIKCYVENQFSHDGIVLFHELVHEYLP-DNFTLPCVIKGCARLGVVQEGKQIHG 136

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+K G   D +V  +L+ MYS+CG +  AR +FD M ++DVV W+++I GY R G  + 
Sbjct: 137 LALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDI 196

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL++  EM   D     V    +V   +    V+  + +   +   C++    +    A+
Sbjct: 197 ALQLFEEMPERDAFSWTV----LVDGLSKCGKVESARKLFDQM--PCRN----LVSWNAM 246

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I+ Y K G+   A +LF ++    +V+W +MI+GY    +  + V++F  M++    PS 
Sbjct: 247 INGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSH 306

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T++S++     +  L  G+W+H+Y+ +NGFE    +  +L++MY KC  I SA T+F  
Sbjct: 307 ATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRA 366

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++ K V  W A+I         + A  LF+ M  + ++PN +  +G+L+ C  AG ++ G
Sbjct: 367 IQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDG 426

Query: 396 K-WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYG 453
           + +    + +  +E  +     LVD+  + G +  A        I  +  +W +++ G  
Sbjct: 427 RQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSR 486

Query: 454 MHG 456
            HG
Sbjct: 487 NHG 489


>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score =  348 bits (894), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 164/418 (39%), Positives = 260/418 (62%)

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           ++ ALI MY+ CG L +A+++F+ +    +VSW  +I GY + N+  E +RLF  M   N
Sbjct: 61  VSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAAN 120

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           +    +T++ +I+ C  +G  +    +  YI  N  E  + + N L+DMYG+   + +AR
Sbjct: 121 IKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRLGNLTAAR 180

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            LFD M  +DV+ W ++I+ Y+QA     A +LF  M  +KV+P++VT+  +LS C   G
Sbjct: 181 KLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLG 240

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
            L++G  +H YI + G++ D+ +  +L+DMY KCG V  A  +F     +D   W ++++
Sbjct: 241 KLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVIS 300

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           G  ++G    AL  F  M R GV+P   TF+G+L AC+HAGLV +G   F+ M    GLV
Sbjct: 301 GLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLV 360

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
           P ++HYGC+VDLL R+G +D+A+E IK MP+ P+++VW  LL+A KLH N  + EIA  +
Sbjct: 361 PAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKR 420

Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           +LE++P + G  VL+SN YA  +RW+D   +R +M++  V+K  G SS+EV+G+V  +
Sbjct: 421 LLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSSSIEVDGMVSNY 478



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 204/370 (55%), Gaps = 4/370 (1%)

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           +   IH  A+K G +   +VSNALI MY+ CG L  A+ +FD M +RD+VSW+T+I GY 
Sbjct: 42  ISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYS 101

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           +    +E L +   M   +I+   V M+ ++   + + D +   ++   +  N  + ++ 
Sbjct: 102 QYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKEN--NLEID 159

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V +   LIDMY + GNL  A++LF+ + +  V+SWT MI+GY + ++ ++ V+LF EM+ 
Sbjct: 160 VYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMA 219

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
             V P ++T+ S++  C  +G L +G  +H YI R+G +  + + N+L+DMY KC  +  
Sbjct: 220 AKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEK 279

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           A  +F  MK KD + W +VIS  A     + A +LF  M    V+P   T VG+L  C  
Sbjct: 280 ALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAH 339

Query: 389 AGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWN 446
           AG +  G ++  +     GL   +     +VD+ ++ G+++ AY    +  I  D+ +W 
Sbjct: 340 AGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWR 399

Query: 447 AMMAGYGMHG 456
            +++   +HG
Sbjct: 400 ILLSACKLHG 409



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 165/317 (52%), Gaps = 4/317 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+L+  Y + NK    L ++  M     + D  T+  I+ AC+ +        +  
Sbjct: 90  LVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVK 149

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +  +N L+ D Y+ N LI MY   G+L +AR LFD MP RDV+SW++MI GY +     +
Sbjct: 150 YIKENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSD 209

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+++ +EM    ++P +V + S++S  A +  +D+G A+H  + R+    +  + +  +L
Sbjct: 210 AVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRH--GVQADIYVGNSL 267

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           IDMY KCG +  A ++F+R+     VSWT +ISG       N  + LF++M+ E V P+ 
Sbjct: 268 IDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTH 327

Query: 276 ITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            T + +++ C   G +  G ++  +    +G   ++     +VD+  +   I  A     
Sbjct: 328 GTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIK 387

Query: 335 GMK-SKDVMIWNAVISA 350
            M    DV++W  ++SA
Sbjct: 388 KMPIVPDVVVWRILLSA 404



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 141/257 (54%), Gaps = 2/257 (0%)

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           +H + L+ GFE  L ++NAL+ MY  C ++  A+ +FDGM  +D++ WN +I  Y+Q + 
Sbjct: 46  IHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNK 105

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
             +   LF  M  + ++ + VTMV ++  C+  G  E    +  YI++  LE+DV L   
Sbjct: 106 YKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNT 165

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           L+DMY + G++  A +LF     RD+  W +M+ GY       +A+  F +M  + VKP+
Sbjct: 166 LIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPD 225

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
            +T   +L+AC+H G +  G +V    +   G+   I     ++D+  + G++++A E+ 
Sbjct: 226 KVTVASVLSACAHLGKLDVGWAVH-HYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVF 284

Query: 537 KSMPLRPNMIVWGALLA 553
             M  + + + W ++++
Sbjct: 285 HRMKDK-DSVSWTSVIS 300



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 2/172 (1%)

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           +++L T   A  +   +H +  K G E  + +  AL+ MYA CG +  A ++F   + RD
Sbjct: 30  VVALTTNINASTISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRD 89

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           +  WN ++ GY  +   +E L  F  M  + +K + +T + ++ ACSH G      S+  
Sbjct: 90  LVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMV- 148

Query: 502 KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           K +    L   +     ++D+ GR G L  A ++  +MP R ++I W +++ 
Sbjct: 149 KYIKENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKR-DVISWTSMIT 199


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  348 bits (894), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 198/602 (32%), Positives = 317/602 (52%), Gaps = 11/602 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKN-GSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           YN L++SY +   P  AL  +A  R   G  VD FT    L AC++ L    GK +H   
Sbjct: 70  YNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKAVHAMT 129

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           + +GL    ++SN+L  MY+ CG +  AR +FD     D VSW++++ GY R G  EE L
Sbjct: 130 VLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGAREETL 189

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADV--DLGKAIHACVVRNCKDEKLGVAIATAL 215
           +V   M    +  +  A+ S++   A  +DV   + +A+H CVV+   D  L   +A+A+
Sbjct: 190 KVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADL--FLASAM 247

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR-----CNEIN-EGVRLFAEMIEE 269
           IDMY+K G L  A  LF  +   +V+ +  MI+G+ R       E++ E + L++EM   
Sbjct: 248 IDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEMQSR 307

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            + PSE T  S++  C   G    GK +H  +L++ F     + +AL+D+Y     +   
Sbjct: 308 GMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCMEDG 367

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
              F  +  +D++ W ++IS   Q    +KA  LF       ++P+  TM  +++ C   
Sbjct: 368 YRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASL 427

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
                G+ +     K G      +  + + M A+ GDV+   R F E   RD+  W+A++
Sbjct: 428 AVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVI 487

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           + +  HGC  +AL  F +M  + V PN +TF+ +L ACSH GLV +G   ++ M +  GL
Sbjct: 488 SSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYEIMKNEYGL 547

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            P I+H  C+VDLLGRAG L +A   I+      + +VW +LLA+ ++H +   G++ A 
Sbjct: 548 SPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGDMERGQLVAD 607

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           QI+++EP +    V++ N+Y  A   +  +  R +MKE  VKKEPG S +E+   VH F+
Sbjct: 608 QIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWIELRSGVHSFV 667

Query: 630 RG 631
            G
Sbjct: 668 AG 669



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/497 (25%), Positives = 238/497 (47%), Gaps = 26/497 (5%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSE--CGSLVSARYLFDEMPN 134
           +L++C    + H+   +H    +       ++ N+L+  Y     G+ + A  L DEMP 
Sbjct: 8   LLRSCTA--LPHVAA-VHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDEMPR 64

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVM-REMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
           R+ VS++ +I  Y R GLP  ALE   R      +R       + ++  +   D+  GKA
Sbjct: 65  RNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKA 124

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           +HA  V +      GV ++ +L  MY+ CG +  A+++F+   ++  VSW  ++SGY+R 
Sbjct: 125 VHAMTVLDGLGN--GVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRA 182

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIEC--GFVGGLQLGKWLHAYILRNGFEFSLA 311
               E +++F+ M    +  +   + S+I  C  G   G  + + +H  +++ G +  L 
Sbjct: 183 GAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLF 242

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI------DKAFELFI 365
           +A+A++DMY K   + +A  LF  +   +V+++NA+I+ + +           +A  L+ 
Sbjct: 243 LASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYS 302

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            M+   ++P+E T   +L  C  AG    GK +H  + K     D  + +AL+D+Y+  G
Sbjct: 303 EMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSG 362

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
            +   YR F     +DI  W +M++G   +   E+AL  F +    G+KP+  T   ++N
Sbjct: 363 CMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMN 422

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM----VDLLGRAGLLDEAHEMIKSMPL 541
           AC+   +   G     + +  L +      +  M    + +  R+G +D      + M  
Sbjct: 423 ACASLAVARTG-----EQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMES 477

Query: 542 RPNMIVWGALLAASKLH 558
           R +++ W A++++   H
Sbjct: 478 R-DVVSWSAVISSHAQH 493



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 105/214 (49%), Gaps = 2/214 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + S+++  ++N     AL ++      G + D FT+ +++ ACA + +   G++I  
Sbjct: 379 IVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQC 438

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            AIK G +    + N+ I M +  G + +    F EM +RDVVSWS +I  + + G   +
Sbjct: 439 LAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARD 498

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL +  EM    + P+EV  +++++  +    VD G   +  +++N       +   T +
Sbjct: 499 ALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYYE-IMKNEYGLSPTIKHVTCV 557

Query: 216 IDMYSKCGNLAYAKQLF-NRLNQNSVVSWTVMIS 248
           +D+  + G LA A+    +    +  V W  +++
Sbjct: 558 VDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLA 591


>gi|242046440|ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
 gi|241924468|gb|EER97612.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
          Length = 695

 Score =  348 bits (894), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 195/588 (33%), Positives = 317/588 (53%), Gaps = 15/588 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +N+++   +   + S AL  Y  M  +GS V D FT P +LKACA + +   G+++    
Sbjct: 112 WNAVIKGLVDAGRFSEALQWYWDMVGDGSVVADRFTYPPVLKACAALGVVEQGRKVQENV 171

Query: 98  ---IKNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
              I  G+   + +V  AL+ M+++CG L  AR +F+ M  RD+ +W+ MI G   GG  
Sbjct: 172 EADIARGIAKCNVFVQCALVDMFAKCGCLGEARNVFESMEVRDLAAWTAMIGGTVHGGDW 231

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            E + +++ M+    RP  + + +++     V ++  G A+H CVV      K GV + T
Sbjct: 232 LEVMTLLKRMKSEGFRPDSMILATVIPACGKVKELRTGTALHGCVV------KCGVGVDT 285

Query: 214 ----ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
               AL+DMY KC  L +A  LF  ++   V+SW+ +I+G+ +    +  V LF+EM+  
Sbjct: 286 CVLNALVDMYCKCARLDFAASLFWSIDHKDVISWSTIIAGHSQNRRYHVSVSLFSEMVAS 345

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            V P+  T+ S++     +   + GK +H + LRNG E S  +A+AL+D Y +   I+ A
Sbjct: 346 GVKPNSTTLASILPSLSELRLFRYGKEIHCFSLRNGLEHSEFLASALIDFYSRQGSIKEA 405

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             +F+     D+++ N++I  Y      + A  L   +    +RP+ VT+V +L LC + 
Sbjct: 406 EIVFEFTPKNDLVVSNSMIGGYVVNEDSESALRLLRALLKEGLRPDRVTVVSVLPLCNQH 465

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
             L  GK LH Y  +  +     +  AL DMY KCG +  A+ +F     R+   +N ++
Sbjct: 466 SRLLQGKELHAYAIRHNISSCCSVSNALTDMYCKCGCLELAFEIFLLMTERNTVTYNTLI 525

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           +  G HG  E+A   F  M+R GV P+ +TF+ LL+ CSH GL+ +G   +D M+    +
Sbjct: 526 SSLGKHGHAEQAFFLFDLMKRDGVSPDKVTFVALLSCCSHEGLIDKGLCFYDSMLRDYNI 585

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            P  EHY C+VDL  R+G LD A   I ++   P + V G LL+A + H    + E+ A 
Sbjct: 586 SPDKEHYSCIVDLYSRSGRLDAAWSFIANLQEVPEIDVLGCLLSACREHNRMDIAELVAE 645

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
           +I E  P + GY++L+SNIYA A  W++V  +R +++E  +KK  G S
Sbjct: 646 RIFEQNPNDPGYHILLSNIYASAGMWSEVTRIRTMIEERSLKKRTGNS 693



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 206/404 (50%), Gaps = 3/404 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  + +++   +        + +   M+  G   D+  + T++ AC +V     G  
Sbjct: 212 VRDLAAWTAMIGGTVHGGDWLEVMTLLKRMKSEGFRPDSMILATVIPACGKVKELRTGTA 271

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HG  +K G+  D  V NAL+ MY +C  L  A  LF  + ++DV+SWST+I G+ +   
Sbjct: 272 LHGCVVKCGVGVDTCVLNALVDMYCKCARLDFAASLFWSIDHKDVISWSTIIAGHSQNRR 331

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
              ++ +  EM    ++P+   + S++   +++     GK IH   +RN  +      +A
Sbjct: 332 YHVSVSLFSEMVASGVKPNSTTLASILPSLSELRLFRYGKEIHCFSLRNGLEHS--EFLA 389

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           +ALID YS+ G++  A+ +F    +N +V    MI GY+   +    +RL   +++E + 
Sbjct: 390 SALIDFYSRQGSIKEAEIVFEFTPKNDLVVSNSMIGGYVVNEDSESALRLLRALLKEGLR 449

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P  +T++S++  C     L  GK LHAY +R+      +++NAL DMY KC  +  A  +
Sbjct: 450 PDRVTVVSVLPLCNQHSRLLQGKELHAYAIRHNISSCCSVSNALTDMYCKCGCLELAFEI 509

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F  M  ++ + +N +IS+  +    ++AF LF  MK   V P++VT V LLS C+  G +
Sbjct: 510 FLLMTERNTVTYNTLISSLGKHGHAEQAFFLFDLMKRDGVSPDKVTFVALLSCCSHEGLI 569

Query: 393 EMGKWLH-TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
           + G   + + +    +  D    + +VD+Y++ G ++ A+   +
Sbjct: 570 DKGLCFYDSMLRDYNISPDKEHYSCIVDLYSRSGRLDAAWSFIA 613



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 222/474 (46%), Gaps = 9/474 (1%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSEC--GSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           + +H   +  G      ++  L++ Y+    G L  A  +FD M  R+  +W+ +I+G  
Sbjct: 61  RRLHAALLVRGYRTSTVLAAQLVRAYARLRDGGLGHAVRVFDGMLTRNSFAWNAVIKGLV 120

Query: 149 RGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD--E 205
             G   EAL+   +M     +         ++   A +  V+ G+ +   V  +      
Sbjct: 121 DAGRFSEALQWYWDMVGDGSVVADRFTYPPVLKACAALGVVEQGRKVQENVEADIARGIA 180

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           K  V +  AL+DM++KCG L  A+ +F  +    + +WT MI G +   +  E + L   
Sbjct: 181 KCNVFVQCALVDMFAKCGCLGEARNVFESMEVRDLAAWTAMIGGTVHGGDWLEVMTLLKR 240

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M  E   P  + + ++I  CG V  L+ G  LH  +++ G      + NALVDMY KC  
Sbjct: 241 MKSEGFRPDSMILATVIPACGKVKELRTGTALHGCVVKCGVGVDTCVLNALVDMYCKCAR 300

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           +  A +LF  +  KDV+ W+ +I+ ++Q      +  LF  M  S V+PN  T+  +L  
Sbjct: 301 LDFAASLFWSIDHKDVISWSTIIAGHSQNRRYHVSVSLFSEMVASGVKPNSTTLASILPS 360

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
            +E      GK +H +  + GLE    L +AL+D Y++ G +  A  +F      D+ + 
Sbjct: 361 LSELRLFRYGKEIHCFSLRNGLEHSEFLASALIDFYSRQGSIKEAEIVFEFTPKNDLVVS 420

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV- 504
           N+M+ GY ++   E AL     + + G++P+ +T + +L  C+    + +GK +    + 
Sbjct: 421 NSMIGGYVVNEDSESALRLLRALLKEGLRPDRVTVVSVLPLCNQHSRLLQGKELHAYAIR 480

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           H +     + +   + D+  + G L+ A E+   M  R N + +  L+++   H
Sbjct: 481 HNISSCCSVSN--ALTDMYCKCGCLELAFEIFLLMTER-NTVTYNTLISSLGKH 531



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 115/242 (47%), Gaps = 11/242 (4%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           N L   NS++  Y+ N    SAL +   + K G   D  T+ ++L  C Q      GKE+
Sbjct: 415 NDLVVSNSMIGGYVVNEDSESALRLLRALLKEGLRPDRVTVVSVLPLCNQHSRLLQGKEL 474

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           H +AI++ +     VSNAL  MY +CG L  A  +F  M  R+ V+++T+I    + G  
Sbjct: 475 HAYAIRHNISSCCSVSNALTDMYCKCGCLELAFEIFLLMTERNTVTYNTLISSLGKHGHA 534

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR--NCKDEKLGVAI 211
           E+A  +   M+   + P +V  ++++S  +    +D G   +  ++R  N   +K     
Sbjct: 535 EQAFFLFDLMKRDGVSPDKVTFVALLSCCSHEGLIDKGLCFYDSMLRDYNISPDKEHY-- 592

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL-FAEMIEEN 270
            + ++D+YS+ G L  A      L +  V    V+      C E N   R+  AE++ E 
Sbjct: 593 -SCIVDLYSRSGRLDAAWSFIANLQE--VPEIDVLGCLLSACREHN---RMDIAELVAER 646

Query: 271 VF 272
           +F
Sbjct: 647 IF 648



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 7/171 (4%)

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC--GDVNGAYRLFSEAIYRDICMWNAM 448
           AL   + LH  +  +G     +L   LV  YA+   G +  A R+F   + R+   WNA+
Sbjct: 56  ALTEVRRLHAALLVRGYRTSTVLAAQLVRAYARLRDGGLGHAVRVFDGMLTRNSFAWNAV 115

Query: 449 MAGYGMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           + G    G   EAL ++ DM   G V  +  T+  +L AC+  G+V +G+ V + +   +
Sbjct: 116 IKGLVDAGRFSEALQWYWDMVGDGSVVADRFTYPPVLKACAALGVVEQGRKVQENVEADI 175

Query: 508 --GLVPKIEHYGC-MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAAS 555
             G+        C +VD+  + G L EA  + +SM +R ++  W A++  +
Sbjct: 176 ARGIAKCNVFVQCALVDMFAKCGCLGEARNVFESMEVR-DLAAWTAMIGGT 225


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 213/630 (33%), Positives = 327/630 (51%), Gaps = 63/630 (10%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           + ++N  ++++++N    SAL+++  M +  S   N  I   L+     L  +L  ++  
Sbjct: 49  ILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP- 107

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
                  + D +  N ++  Y     L  AR LFD MP +DVVSW++++ GY + G  +E
Sbjct: 108 -------ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDE 160

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV-----------RNC-- 202
           A EV   M        E   IS   L A  A V  G+   AC++            NC  
Sbjct: 161 AREVFDNM-------PEKNSISWNGLLA--AYVHNGRIEEACLLFESKSDWDLISWNCLM 211

Query: 203 ----KDEKLGVA-------------IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
               + +KLG A                 +I  Y++ G L+ A++LF+      V +WT 
Sbjct: 212 GGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTA 271

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
           M+SGY++   ++E    F EM E+N    E++  ++I   G+V   ++       I R  
Sbjct: 272 MVSGYVQNGMLDEAKTFFDEMPEKN----EVSYNAMI--AGYVQTKKMD------IAREL 319

Query: 306 FEF----SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
           FE     +++  N ++  YG+  +I  AR  FD M  +D + W A+I+ YAQ+   ++A 
Sbjct: 320 FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEAL 379

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
            +F+ +K      N  T    LS C +  ALE+GK +H    K G      +  AL+ MY
Sbjct: 380 NMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMY 439

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
            KCG ++ A   F     +D+  WN M+AGY  HG G +AL  F  M+ +GVKP+ IT +
Sbjct: 440 FKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMV 499

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
           G+L+ACSH GL+  G   F  M    G++P  +HY CM+DLLGRAG L+EA ++I++MP 
Sbjct: 500 GVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPF 559

Query: 542 RPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGV 601
           +P    WGALL AS++H N  +GE AA  + ++EPQN G  VL+SN+YA + RW D   +
Sbjct: 560 QPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKM 619

Query: 602 RRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           R  M++I V+K PG+S VEV   +H F  G
Sbjct: 620 RSKMRDIGVQKVPGYSWVEVQNKIHTFSVG 649



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 62/143 (43%), Gaps = 38/143 (26%)

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           + GL+  G   F  M     + P  +HY CM+DLLGR   L+E                 
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
           GALL AS++H N  +GE AA    ++ PQN G +                      M+++
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQNSGIS---------------------KMRDV 857

Query: 609 RVKKEPGFSSVEVNGLVHKFIRG 631
            V+K PG+S  EV   +H F  G
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVG 880



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 22/221 (9%)

Query: 336 MKSKDVMIWNAVISAYAQ-AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
           +K  D++ WN  IS + +  HC D A  +F  M     R + V+   ++S     G L  
Sbjct: 44  VKDPDILKWNKAISTHMRNGHC-DSALHVFNTMP----RRSSVSYNAMIS-----GYLRN 93

Query: 395 GKW-LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            K+ L   +  Q  E D+     ++  Y +   +  A RLF     +D+  WN++++GY 
Sbjct: 94  SKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYA 153

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +G  +EA   F +M     + N I++ GLL A  H G + E   +F+           +
Sbjct: 154 QNGYVDEAREVFDNMP----EKNSISWNGLLAAYVHNGRIEEACLLFESKSDW-----DL 204

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
             + C++    R   L +A  +   MP+R + I W  +++ 
Sbjct: 205 ISWNCLMGGFVRKKKLGDARWLFDKMPVR-DAISWNTMISG 244


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 200/621 (32%), Positives = 341/621 (54%), Gaps = 29/621 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN-FTIPTILKACAQVLMTHLG--KEIHG 95
           +N++++++++N     AL ++  M  +G+   N  T  ++L +C +  +  L   + IHG
Sbjct: 79  WNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHG 138

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF----DEMPNRDVVSWSTMIRGYHRGG 151
             +  G++ +A+V  AL+  Y + GSL  A  +F    DE P+  +V+ S MI    + G
Sbjct: 139 RIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAMISACWQNG 198

Query: 152 LPEEALEVMREMRFMDIRPSEVAMIS------MVSLFADVADVDLGKAIHACVVRNCKDE 205
            P+E+L +   M     +PS V ++S      M+ + +  A V L +A+   VV   +D 
Sbjct: 199 WPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFV-LEQAME--VVSATRDN 255

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
            LG    T L+  Y++  +L+ A+  F+ +    VVSW  M + Y++ +   E + LF  
Sbjct: 256 VLG----TTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFER 311

Query: 266 MIEENVFPSEITILSLIIECGFV---GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           M+ E V PS  T ++ +  C          +GK + + +   G E   A+ANA ++MY K
Sbjct: 312 MLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAK 371

Query: 323 CREIRSARTLFDGMKS--KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTM 379
           C  +  AR +F+ +    +D + WN++++AY       +AFELF  M+  K V+PN+VT 
Sbjct: 372 CGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTF 431

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF--SEA 437
           V +L   T   ++  G+ +H  +   G E D +++ AL++MYAKCG ++ A  +F  S +
Sbjct: 432 VAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSS 491

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
              D+  W +++AGY  +G  E AL  F  M++ GV+PN ITFI  L AC+H G + +G 
Sbjct: 492 NQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISALTACNHGGKLEQGC 551

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
            +   M    G+VP  +H+ C+VDLLGR G LDEA ++++    + ++I W ALL A K 
Sbjct: 552 ELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKN 610

Query: 558 HKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
            K    GE  A +I++++P+     ++++++YA A RWN+ A +R+ M +  ++ +PG S
Sbjct: 611 SKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCS 670

Query: 618 SVEVNGLVHKFIRGGMVNWKS 638
           +VEVN  +H F  G   + KS
Sbjct: 671 AVEVNQELHSFSAGDKSHPKS 691



 Score =  228 bits (581), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 155/499 (31%), Positives = 254/499 (50%), Gaps = 29/499 (5%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP--- 133
           ++ AC+ +     G+ IH        + ++ + NALI MYS+CGSL+ A+  FD +P   
Sbjct: 13  LVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRAS 72

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI-RPSEVAMISMVSLFADVADVDLG- 191
            RDVV+W+ MI  + R G   EAL++ R+M       P+ V  +S++    +   + L  
Sbjct: 73  KRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVEAGLLSLED 132

Query: 192 -KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ----NSVVSWTVM 246
            +AIH  +V    + +    + TAL+D Y K G+L  A ++F R +      S+V+ + M
Sbjct: 133 VRAIHGRIVGAGIERE--AFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPSTSLVTCSAM 190

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           IS   +     E +RLF  M  E   PS +T++S++  C     L +G    A++L    
Sbjct: 191 ISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSM---LPVGS-ATAFVLEQAM 246

Query: 307 EFSLA-----MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
           E   A     +   L+  Y +  ++  AR  FD ++S DV+ WNA+ +AY Q H   +A 
Sbjct: 247 EVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREAL 306

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCT---EAGALEMGKWLHTYIEKQGLEVDVILKTALV 418
            LF  M +  VRP+  T +  L+ C       A  +GK + + +E+ GLE D  +  A +
Sbjct: 307 VLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATL 366

Query: 419 DMYAKCGDVNGAYRLFSE--AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG-VKP 475
           +MYAKCG +  A  +F       RD   WN+M+A YG HG G+EA   F  ME    VKP
Sbjct: 367 NMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKP 426

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEM 535
           N +TF+ +L+A +    + +G+ +  ++V   G          ++++  + G LD+A  +
Sbjct: 427 NKVTFVAVLDASTSRTSIAQGREIHARVVSN-GFESDTVIQNALLNMYAKCGSLDDAQAI 485

Query: 536 I-KSMPLRPNMIVWGALLA 553
             KS   + ++I W +L+A
Sbjct: 486 FDKSSSNQEDVIAWTSLVA 504



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 206/413 (49%), Gaps = 28/413 (6%)

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
           M++RP+  A+I++V+  + + ++  G+ IH+ +  + +D +    +  ALI MYSKCG+L
Sbjct: 1   MEVRPNCHALIALVNACSCLGNLAAGRRIHSQI--SDRDFEENSVLGNALISMYSKCGSL 58

Query: 226 AYAKQLFNRLNQNS---VVSWTVMISGYIRCNEINEGVRLFAEMIEENV-FPSEITILSL 281
             AKQ F+RL + S   VV+W  MIS ++R     E ++LF +M  +    P+ +T +S+
Sbjct: 59  IDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSV 118

Query: 282 IIECGFVGGLQLG--KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF----DG 335
           +  C   G L L   + +H  I+  G E    +  ALVD YGK   +  A  +F    D 
Sbjct: 119 LDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDE 178

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
             S  ++  +A+ISA  Q     ++  LF  M +   +P+ VT+V +L+ C+    L +G
Sbjct: 179 EPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACS---MLPVG 235

Query: 396 KWLHTYIEKQGLEV-----DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
                ++ +Q +EV     D +L T L+  YA+  D++ A   F      D+  WNAM A
Sbjct: 236 S-ATAFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQSPDVVSWNAMAA 294

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL--- 507
            Y  H    EAL+ F  M   GV+P+  TFI  L AC  A    +  S   K +  L   
Sbjct: 295 AYLQHHRPREALVLFERMLLEGVRPSVATFITALTAC--AAYPPQTASAIGKRIQSLLEE 352

Query: 508 -GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM-PLRPNMIVWGALLAASKLH 558
            GL          +++  + G L +A  + + + P R + I W ++LAA   H
Sbjct: 353 AGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHH 405



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 148/301 (49%), Gaps = 11/301 (3%)

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           V P+   +++L+  C  +G L  G+ +H+ I    FE +  + NAL+ MY KC  +  A+
Sbjct: 3   VRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAK 62

Query: 331 TLFDGM---KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV-RPNEVTMVGLLSLC 386
             FD +     +DV+ WNA+ISA+ +     +A +LF  M       PN VT V +L  C
Sbjct: 63  QAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSC 122

Query: 387 TEAG--ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF----SEAIYR 440
            EAG  +LE  + +H  I   G+E +  ++TALVD Y K G ++ A+ +F     E    
Sbjct: 123 VEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPST 182

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
            +   +AM++    +G  +E+L  F  M   G KP+G+T + +LNACS   + +    V 
Sbjct: 183 SLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVL 242

Query: 501 DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
           ++ +  +           ++    R+  L  A     ++   P+++ W A+ AA   H  
Sbjct: 243 EQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQ-SPDVVSWNAMAAAYLQHHR 301

Query: 561 P 561
           P
Sbjct: 302 P 302


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 198/617 (32%), Positives = 323/617 (52%), Gaps = 73/617 (11%)

Query: 79  KACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP----- 133
           K C +       K++H   IK+  + + ++ N LI  YS+ G++  AR++FD+MP     
Sbjct: 13  KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72

Query: 134 --------------------------NRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFM 166
                                     NRD VSW+++I GY   G   EA++    M +  
Sbjct: 73  SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132

Query: 167 DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKC 222
            +  + +   +M+ L +    VDLG+ IH  +V      K G    V + ++L+DMY+K 
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIV------KFGFGAYVFVGSSLVDMYAKM 186

Query: 223 GNLAYAKQLFNRLNQNSVV-------------------------------SWTVMISGYI 251
           G ++ A Q+F+ + + +VV                               SWT MI+G I
Sbjct: 187 GLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLI 246

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +     E + LF +M +E +   + T  S++  CG +  L+ GK +H  I+R+G+  ++ 
Sbjct: 247 QNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVF 306

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           + +ALVDMY KCR +R A  +F  M +K+V+ W A++  Y Q    ++A  +F  M+ + 
Sbjct: 307 VGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNG 366

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           + P++ T+  ++S C    +LE G   H      GL   + +  AL+ +Y KCG +  + 
Sbjct: 367 IEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSN 426

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
           +LF E  +RD   W A+++GY   G   E +  F  M   G+KP+ +TFI +L+ACS AG
Sbjct: 427 QLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAG 486

Query: 492 LVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
           LV  G+  F+ M+   G++P  +HY CM+DL GRAG L+EA   I  MP  P+ I W  L
Sbjct: 487 LVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATL 546

Query: 552 LAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVK 611
           L++ +L+ N  +G+ AA  +LE++PQN    +L+S+IYA   +W++VA +RR M+E   +
Sbjct: 547 LSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGAR 606

Query: 612 KEPGFSSVEVNGLVHKF 628
           KEPGFS ++    V+ F
Sbjct: 607 KEPGFSWIKYKSKVYIF 623


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 213/630 (33%), Positives = 327/630 (51%), Gaps = 63/630 (10%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           + ++N  ++++++N    SAL+++  M +  S   N  I   L+     L  +L  ++  
Sbjct: 49  ILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP- 107

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
                  + D +  N ++  Y     L  AR LFD MP +DVVSW++++ GY + G  +E
Sbjct: 108 -------ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDE 160

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV-----------RNC-- 202
           A EV   M        E   IS   L A  A V  G+   AC++            NC  
Sbjct: 161 AREVFDNM-------PEKNSISWNGLLA--AYVHNGRIEEACLLFESKSDWDLISWNCLM 211

Query: 203 ----KDEKLGVA-------------IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
               + +KLG A                 +I  Y++ G L+ A++LF+      V +WT 
Sbjct: 212 GGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTA 271

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
           M+SGY++   ++E    F EM E+N    E++  ++I   G+V   ++       I R  
Sbjct: 272 MVSGYVQNGMLDEAKTFFDEMPEKN----EVSYNAMI--AGYVQTKKMD------IAREL 319

Query: 306 FEF----SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
           FE     +++  N ++  YG+  +I  AR  FD M  +D + W A+I+ YAQ+   ++A 
Sbjct: 320 FESMPCRNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEAL 379

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
            +F+ +K      N  T    LS C +  ALE+GK +H    K G      +  AL+ MY
Sbjct: 380 NMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMY 439

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
            KCG ++ A   F     +D+  WN M+AGY  HG G +AL  F  M+ +GVKP+ IT +
Sbjct: 440 FKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMV 499

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
           G+L+ACSH GL+  G   F  M    G++P  +HY CM+DLLGRAG L+EA ++I++MP 
Sbjct: 500 GVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPF 559

Query: 542 RPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGV 601
           +P    WGALL AS++H N  +GE AA  + ++EPQN G  VL+SN+YA + RW D   +
Sbjct: 560 QPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKM 619

Query: 602 RRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           R  M++I V+K PG+S VEV   +H F  G
Sbjct: 620 RSKMRDIGVQKVPGYSWVEVQNKIHTFSVG 649



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 22/221 (9%)

Query: 336 MKSKDVMIWNAVISAYAQ-AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
           +K  D++ WN  IS + +  HC D A  +F  M     R + V+   ++S     G L  
Sbjct: 44  VKDPDILKWNKAISTHMRNGHC-DSALHVFNTMP----RRSSVSYNAMIS-----GYLRN 93

Query: 395 GKW-LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            K+ L   +  Q  E D+     ++  Y +   +  A RLF     +D+  WN++++GY 
Sbjct: 94  SKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYA 153

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +G  +EA   F +M     + N I++ GLL A  H G + E   +F+           +
Sbjct: 154 QNGYVDEAREVFDNMP----EKNSISWNGLLAAYVHNGRIEEACLLFESKSDW-----DL 204

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
             + C++    R   L +A  +   MP+R + I W  +++ 
Sbjct: 205 ISWNCLMGGFVRKKKLGDARWLFDKMPVR-DAISWNTMISG 244


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 175/443 (39%), Positives = 265/443 (59%), Gaps = 4/443 (0%)

Query: 188 VDLGKAIHACVV-RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
           V+ G+ +HA +V  +  D  L   +   +++MY+KCG L  A+++F+ +    +V+WT +
Sbjct: 103 VEQGRIVHAHLVDSHFLDNHL--VLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTAL 160

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           I+G+ + N   + + LF +M+     P+  T+ SL+   G   GL  G  LHA+ L+ G+
Sbjct: 161 IAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGY 220

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
           + S+ + +ALVDMY +C  + +A+  FDGM +K  + WNA+IS +A+    + A  L   
Sbjct: 221 QSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWK 280

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           M+    +P   T   +LS C   GALE GKW+H ++ K GL++   +   L+DMYAK G 
Sbjct: 281 MQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGS 340

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           ++ A R+F   +  D+  WN M+ G   HG G+E L  F  M R G++PN I+F+ +L A
Sbjct: 341 IDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTA 400

Query: 487 CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
           CSH+GL+ EG   F+ ++    + P + HY   VDLLGR GLLD A   I+ MP+ P   
Sbjct: 401 CSHSGLLDEGLYYFE-LMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAA 459

Query: 547 VWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMK 606
           VWGALL A ++HKN  +G  AA +  E++P + G  +L+SNIYA A RW DVA VR++MK
Sbjct: 460 VWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRKMMK 519

Query: 607 EIRVKKEPGFSSVEVNGLVHKFI 629
           E  VKK+P  S VE+   VH F+
Sbjct: 520 ESGVKKQPACSWVEIENAVHLFV 542



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 190/390 (48%), Gaps = 35/390 (8%)

Query: 10  LEQTRQCHAHIIKTHFKFSY---TNII----------------------NPLTRYNSLVT 44
           +EQ R  HAH++ +HF  ++    NII                        +  + +L+ 
Sbjct: 103 VEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIA 162

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
            + +NN+P  AL ++  M + G + ++FT+ ++LKA         G ++H F +K G   
Sbjct: 163 GFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQS 222

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
             YV +AL+ MY+ CG + +A+  FD MP +  VSW+ +I G+ R G  E AL ++ +M+
Sbjct: 223 SVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQ 282

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
             + +P+     S++S  A +  ++ GK +HA ++++    KL   I   L+DMY+K G+
Sbjct: 283 RKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMIKSGL--KLIAFIGNTLLDMYAKAGS 340

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           +  AK++F+RL +  VVSW  M++G  +     E +  F +M+   + P+EI+ L ++  
Sbjct: 341 IDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTA 400

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMI 343
           C   G L  G +    + +   E  +      VD+ G+   +  A      M       +
Sbjct: 401 CSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAV 460

Query: 344 WNAVISAYAQ-------AHCIDKAFELFIH 366
           W A++ A           +  ++AFEL  H
Sbjct: 461 WGALLGACRMHKNMELGVYAAERAFELDPH 490



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 167/312 (53%), Gaps = 7/312 (2%)

Query: 251 IRCNEINEGVRLFA-EMIEENVFPSEITILS-LIIECGFVGGLQLGKWLHAYILRNGF-E 307
           +R ++ + G  L+A ++I+      +  + S L+ EC  +G ++ G+ +HA+++ + F +
Sbjct: 61  LRKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLD 120

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             L + N +V+MY KC  +  AR +FD M +KD++ W A+I+ ++Q +    A  LF  M
Sbjct: 121 NHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQM 180

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
                +PN  T+  LL        L+ G  LH +  K G +  V + +ALVDMYA+CG +
Sbjct: 181 LRLGFQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHM 240

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
           + A   F     +    WNA+++G+   G GE AL     M+R   +P   T+  +L+AC
Sbjct: 241 DAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSAC 300

Query: 488 SHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
           +  G + +GK V   M+  GL L+  I +   ++D+  +AG +D+A  +   + ++P+++
Sbjct: 301 ASIGALEQGKWVHAHMIKSGLKLIAFIGN--TLLDMYAKAGSIDDAKRVFDRL-VKPDVV 357

Query: 547 VWGALLAASKLH 558
            W  +L     H
Sbjct: 358 SWNTMLTGCAQH 369



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 11/211 (5%)

Query: 382 LLSLCTEAGALEMGKWLHTY-IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
           LL  CT  G +E G+ +H + ++   L+  ++L+  +V+MYAKCG ++ A R+F E   +
Sbjct: 93  LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           D+  W A++AG+  +    +AL+ F  M R G +PN  T   LL A      +  G  + 
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEHGLDPGTQLH 212

Query: 501 DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
                  G    +     +VD+  R G +D A      MP + + + W AL++    H  
Sbjct: 213 -AFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTK-SEVSWNALISG---HAR 267

Query: 561 PSMGEIA-----ATQILEIEPQNYGYNVLMS 586
              GE A       Q    +P ++ Y+ ++S
Sbjct: 268 KGEGEHALHLLWKMQRKNFQPTHFTYSSVLS 298



 Score = 46.6 bits (109), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           ++R  + P+   +  LL  C+  G V +G+ V   +V    L   +     +V++  + G
Sbjct: 78  IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI--EPQNYGYNVLM 585
            LD+A  M   MP + +M+ W AL+A    +  P    +   Q+L +  +P ++  + L+
Sbjct: 138 CLDDARRMFDEMPTK-DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLL 196


>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Cucumis sativus]
 gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g14730-like [Cucumis sativus]
          Length = 566

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 187/530 (35%), Positives = 300/530 (56%), Gaps = 13/530 (2%)

Query: 110 NALIQMYSECGSLVSARYLF-DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI 168
            +LI MYS C  +  A  +F D    R+V +++ +I G+   GL  +  +  + MR + +
Sbjct: 14  TSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMRSVGV 73

Query: 169 RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYA 228
            P +     +V    +  +V   + IH C+ +     +L V + +AL++ Y K      A
Sbjct: 74  MPDKFTFPCVVRACCEFMEV---RKIHGCLFK--MGLELNVFVGSALVNTYLKVDGTEDA 128

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
           +++F  L +  VV W  MI+GY +   +N+ V +F  M EE +  S  T  S++     +
Sbjct: 129 EKVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSM 188

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
           G +  G+ +H  + + G+   +A++NAL+DMYGKC+    A  +F+ +  KD+  WN++I
Sbjct: 189 GDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSII 248

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
           SA+ Q    D    LF  M  S+V P+ +T+  +L  C+   AL  G+ +H Y+   GL 
Sbjct: 249 SAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLG 308

Query: 409 V-----DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
                 DV+L  A++DMYAKCG +  A  +F     +D+  WN M+ GY MHG G EAL 
Sbjct: 309 KNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALD 368

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL 523
            F  M  + +KP+ +TF+G+L+ACSHAG V +G+S   +M    G++P IEHY C++D+L
Sbjct: 369 MFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIEHYTCIIDML 428

Query: 524 GRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYN- 582
           GRAG L EA+++ + +PL  N+I+W ALL A +LH N  +G +   +I ++EP++ G   
Sbjct: 429 GRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGNAELGNVVGEKITQLEPKHCGSGS 488

Query: 583 -VLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            +LMS++Y V  R+ +   VRR MKE  VKK PG S +E+   ++ F  G
Sbjct: 489 YILMSSLYGVVGRYEEALEVRRTMKEQNVKKTPGCSWIELKDGLYVFSMG 538



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 232/435 (53%), Gaps = 26/435 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+++  ++ N   +     Y  MR  G   D FT P +++AC + +     ++IHG   
Sbjct: 45  YNAIIAGFVANGLAADGFQFYKRMRSVGVMPDKFTFPCVVRACCEFMEV---RKIHGCLF 101

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+ + +V +AL+  Y +      A  +F+E+P RDVV W+ MI GY + G   +A+ 
Sbjct: 102 KMGLELNVFVGSALVNTYLKVDGTEDAEKVFEELPERDVVLWNAMINGYTKIGHLNKAVV 161

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATA 214
           V + M    I  S     S++S+   + D++ G+AIH  V       K+G    VA++ A
Sbjct: 162 VFKRMGEEGISLSRFTTTSILSILTSMGDINNGRAIHGIVT------KMGYSSCVAVSNA 215

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LIDMY KC +   A  +F  +N+  + SW  +IS + +C++ +  +RLF +M+   V P 
Sbjct: 216 LIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPD 275

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS-----LAMANALVDMYGKCREIRSA 329
            ITI +++  C  +  L  G+ +H Y++ NG   +     + + NA++DMY KC  +++A
Sbjct: 276 VITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNA 335

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             +FD M++KDV  WN +I  YA      +A ++F  M  ++++P+ VT VG+LS C+ A
Sbjct: 336 DIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHA 395

Query: 390 GALEMGKWLHTYIEKQGLEVDVILK----TALVDMYAKCGDVNGAYRLFSEAIYRD-ICM 444
           G +  G+   +++ +  LE  VI      T ++DM  + G +  AY L       D + +
Sbjct: 396 GFVHQGR---SFLTRMELEFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLIL 452

Query: 445 WNAMMAGYGMHGCGE 459
           W A++    +HG  E
Sbjct: 453 WMALLGACRLHGNAE 467



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 114/222 (51%), Gaps = 15/222 (6%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NS+++++ + +     L ++  M  +    D  TI  +L AC+ +     G+EIHG
Sbjct: 241 LFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHG 300

Query: 96  FAIKNGL-----DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           + I NGL       D  ++NA++ MY++CG + +A  +FD M N+DV SW+ MI GY   
Sbjct: 301 YMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMH 360

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           G   EAL++   M    I+P  V  + ++S  +    V  G++    + R   + + GV 
Sbjct: 361 GYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSF---LTR--MELEFGVI 415

Query: 211 IA----TALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMI 247
                 T +IDM  + G+L  A  L  R+  +++++ W  ++
Sbjct: 416 PTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALL 457



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 131/263 (49%), Gaps = 18/263 (6%)

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLF-DGMKSKDVMIWNAVISAYAQAHCIDK 359
           ++ +GF    +   +L++MY +C ++  A  +F D    ++V  +NA+I+ +        
Sbjct: 1   MVTSGFIHLPSSITSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAAD 60

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVD 419
            F+ +  M+   V P++ T   ++  C E   +E+ K +H  + K GLE++V + +ALV+
Sbjct: 61  GFQFYKRMRSVGVMPDKFTFPCVVRACCE--FMEVRK-IHGCLFKMGLELNVFVGSALVN 117

Query: 420 MYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGIT 479
            Y K      A ++F E   RD+ +WNAM+ GY   G   +A++ F  M   G+  +  T
Sbjct: 118 TYLKVDGTEDAEKVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFT 177

Query: 480 FIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC------MVDLLGRAGLLDEAH 533
              +L+  +  G +  G+++        G+V K+ +  C      ++D+ G+    ++A 
Sbjct: 178 TTSILSILTSMGDINNGRAIH-------GIVTKMGYSSCVAVSNALIDMYGKCKHTEDA- 229

Query: 534 EMIKSMPLRPNMIVWGALLAASK 556
            MI  M    ++  W ++++A +
Sbjct: 230 LMIFEMINEKDLFSWNSIISAHE 252


>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
           isoform 1 [Vitis vinifera]
          Length = 672

 Score =  348 bits (892), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 197/574 (34%), Positives = 311/574 (54%), Gaps = 55/574 (9%)

Query: 67  SEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECG-----S 121
           S++ +  I  +L       + HL K+ H   ++ G   D+Y++ +L++ Y+        S
Sbjct: 28  SKLSHKAILHLLNTQCTTSLHHL-KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLS 86

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
             S+  +FD +   +V  W+ MI+       P +A+ +  EM     RP++    +++  
Sbjct: 87  FESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKA 146

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVA--IATALIDMYSKCGNLAYAKQLFN-RLNQN 238
            +D   V  G  +HA +V++     LG    I ++ I MY+  G L  A+++ + +  + 
Sbjct: 147 CSDAGVVAEGVQVHAHLVKH----GLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEV 202

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
             V W  MI GY+R  E+     LF  M + ++  +                     W  
Sbjct: 203 DAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMIST---------------------W-- 239

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
                          NA++  + +C  +  AR  FD MK +D + W+A+I  Y Q  C  
Sbjct: 240 ---------------NAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFM 284

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALV 418
           +A E+F  M+  K+RP +  +  +LS C   GAL+ G+W+HTY ++  +++D +L T+LV
Sbjct: 285 EALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLV 344

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           DMYAKCG ++ A+ +F +   +++  WNAM+ G  MHG  E+A+  F  M+   + PN I
Sbjct: 345 DMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---INPNEI 401

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           TF+G+LNAC+H GLV +G ++F+ M    G+ P+IEHYGC+VDLLGRAGLL EA +++ S
Sbjct: 402 TFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSS 461

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDV 598
           +P  P   VWGALL A + H N  +GE     +LE+EPQN G   L+SNIYA A RW +V
Sbjct: 462 IPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEV 521

Query: 599 AGVRRVMKEIRVKKEPGFSSVEV-NGLVHKFIRG 631
             VR++MKE  +K  PG S +++  G VHKFI G
Sbjct: 522 GEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIG 555



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 120/421 (28%), Positives = 203/421 (48%), Gaps = 46/421 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++   I+NN+P  A+ +Y  M       + +T P +LKAC+   +   G ++H   +
Sbjct: 105 WNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHLV 164

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR-DVVSWSTMIRGYHRGGLPEEAL 157
           K+GL GD ++ ++ I+MY+  G LV AR + D+     D V W+ MI GY R G  E A 
Sbjct: 165 KHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAAR 224

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           E+   M      P      SM+S +                               A+I 
Sbjct: 225 ELFEGM------PDR----SMISTW------------------------------NAMIS 244

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
            +S+CG +  A++ F+ + +   +SW+ MI GYI+     E + +F +M +E + P +  
Sbjct: 245 GFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFV 304

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           + S++  C  +G L  G+W+H Y  RN  +    +  +LVDMY KC  I  A  +F+ M 
Sbjct: 305 LPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMS 364

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           +K+V  WNA+I   A     + A +LF  M ++   PNE+T VG+L+ C   G ++ G  
Sbjct: 365 NKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDIN---PNEITFVGVLNACAHGGLVQKGLT 421

Query: 398 LHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI-CMWNAMMAGYGMH 455
           +   + K+ G+E  +     +VD+  + G +  A ++ S         +W A++     H
Sbjct: 422 IFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKH 481

Query: 456 G 456
           G
Sbjct: 482 G 482


>gi|302784186|ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
 gi|300158197|gb|EFJ24820.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
          Length = 616

 Score =  348 bits (892), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 194/534 (36%), Positives = 291/534 (54%), Gaps = 8/534 (1%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +L+ C ++     GK+IH   +KNG   + YV N L+QMYS+CGSL  A+ +FD M  RD
Sbjct: 76  LLRDCGELAA---GKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMRRRD 132

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
            +SWS MI GY R GL  EA+++ + M       +  A+++  S     A +++GK IHA
Sbjct: 133 SISWSKMIAGYVRHGLAREAIKLYKAMAIDPDGFTFSAVLNACSSLGPRA-LEVGKEIHA 191

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
            + R     K  V + +AL+ M++KCG+L  ++++F+      V+ W  MI  Y +    
Sbjct: 192 HMKRIWL--KPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHP 249

Query: 257 NEGVRLFAEMIEEN--VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
            E + LF  M   +  V P+ IT  +++  C  V  L+ GK +H  ++  GF+F  A  N
Sbjct: 250 REAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQMVDAGFQFDAAAEN 309

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
           +LV+MY KC  I  AR +FDGMK + V+ W  +ISAY +     +A +L+  M    V P
Sbjct: 310 SLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRKMGSEGVEP 369

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           N +T   +LS C+  GALE GK +H  ++  G + D+ +  ALV +Y KCG V+ A ++F
Sbjct: 370 NGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGSVDSARKVF 429

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
                R++  W AM++ Y  H   EEA+  +  M+  GV+ +   +  +L ACS AGL+ 
Sbjct: 430 DRMKIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSFIYGTVLTACSQAGLLE 489

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
             +  F  +    G   K+E Y CM  +LGRAG L EA E++  MP     + W  LLAA
Sbjct: 490 SARHYFGCLTRDCGAPAKLEDYVCMATVLGRAGRLAEAEELLAVMPFEAEFVAWMGLLAA 549

Query: 555 SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
            K H +   G   A  +  +EP N    VL+SNIY  A R  + A VRR M ++
Sbjct: 550 CKAHNDVERGARVAEVLFRLEPLNEAPYVLLSNIYVAAGRQEEAARVRRKMGDV 603



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 132/400 (33%), Positives = 217/400 (54%), Gaps = 11/400 (2%)

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
           ++D    E    +  +L  D  ++  GK IH  VV+N   E   V +   L+ MYSKCG+
Sbjct: 60  WIDSHQQEDCAPAYGNLLRDCGELAAGKKIHEHVVKNGYYEN--VYVGNHLVQMYSKCGS 117

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           L  AK++F+ + +   +SW+ MI+GY+R     E ++L+  M    + P   T  +++  
Sbjct: 118 LEDAKKVFDGMRRRDSISWSKMIAGYVRHGLAREAIKLYKAMA---IDPDGFTFSAVLNA 174

Query: 285 CGFVG--GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
           C  +G   L++GK +HA++ R   +  + + +ALV M+ KC  ++ +R +FD  + KDV+
Sbjct: 175 CSSLGPRALEVGKEIHAHMKRIWLKPDVFVDSALVTMFAKCGSLKESREVFDDCRWKDVL 234

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSK--VRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
            WN++I AY+Q+    +A ELF  M  S   V PN +T   +L+ C+    LE GK +H 
Sbjct: 235 FWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHR 294

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
            +   G + D   + +LV+MYAKCG +  A  +F     R +  W  +++ Y   G   E
Sbjct: 295 QMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPRE 354

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           AL  +  M   GV+PNGITF  +L+ACS  G + EGK+V  +M    G  P +     +V
Sbjct: 355 ALDLYRKMGSEGVEPNGITFASVLSACSSLGALEEGKAVHAQM-KAAGYKPDLAVANALV 413

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
            L G+ G +D A ++   M +R N++ W A+++A   H++
Sbjct: 414 SLYGKCGSVDSARKVFDRMKIR-NVVSWTAMISAYAHHRH 452



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 145/268 (54%), Gaps = 4/268 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN--FTIPTILKACAQVLMTHLGKEIHGF 96
           +NS++ +Y ++  P  A+ ++  M  +   V+    T  T+L AC+ V     GKE+H  
Sbjct: 236 WNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNAITYTTVLAACSAVEDLEQGKEVHRQ 295

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
            +  G   DA   N+L+ MY++CGS+  AR +FD M  R VVSW+ +I  Y R G P EA
Sbjct: 296 MVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWTGIISAYVRKGHPREA 355

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           L++ R+M    + P+ +   S++S  + +  ++ GKA+HA +       K  +A+A AL+
Sbjct: 356 LDLYRKMGSEGVEPNGITFASVLSACSSLGALEEGKAVHAQM--KAAGYKPDLAVANALV 413

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
            +Y KCG++  A+++F+R+   +VVSWT MIS Y       E ++L+  M  E V  S  
Sbjct: 414 SLYGKCGSVDSARKVFDRMKIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQASSF 473

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRN 304
              +++  C   G L+  +     + R+
Sbjct: 474 IYGTVLTACSQAGLLESARHYFGCLTRD 501



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 24/262 (9%)

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
           +L  + G L  GK +H ++ K G   +V +   LV MY+KCG +  A ++F     RD  
Sbjct: 75  NLLRDCGELAAGKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFDGMRRRDSI 134

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG--LVTEGKSVFD 501
            W+ M+AGY  HG   EA+  +  M    + P+G TF  +LNACS  G   +  GK +  
Sbjct: 135 SWSKMIAGYVRHGLAREAIKLYKAM---AIDPDGFTFSAVLNACSSLGPRALEVGKEIHA 191

Query: 502 KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
            M   + L P +     +V +  + G L E+ E+      + +++ W +++ A     +P
Sbjct: 192 HMKR-IWLKPDVFVDSALVTMFAKCGSLKESREVFDDCRWK-DVLFWNSMIVAYSQSGHP 249

Query: 562 --------SMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
                   SMG  +      +EP    Y  +++   AV     D+   + V +++ V   
Sbjct: 250 REAIELFKSMGSSSPP----VEPNAITYTTVLAACSAV----EDLEQGKEVHRQM-VDAG 300

Query: 614 PGFSSVEVNGLVHKFIRGGMVN 635
             F +   N LV+ + + G + 
Sbjct: 301 FQFDAAAENSLVNMYAKCGSIT 322


>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 182/532 (34%), Positives = 300/532 (56%), Gaps = 41/532 (7%)

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFM--DIRPSEVAMISMVSLFADVADVDLGKA 193
           +V  W+TMIR     GL      ++  M+ +   +RP+    + ++       +V  G+ 
Sbjct: 53  NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEE 112

Query: 194 IHACVVRN---CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           +HA VVR    C +      ++ AL+  Y  CG +   +Q+F+ + Q  +V WT++I  Y
Sbjct: 113 VHASVVRTGFACSE-----FVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAY 167

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
           +      + + LF  M E  + P  + I +++  CG +G L + K +H +I ++G E   
Sbjct: 168 VCVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDA 227

Query: 311 AMANALVDMYGKCREIRSA-------------------------------RTLFDGMKSK 339
            +++ L+  YG+C  +  A                               + LF  M  +
Sbjct: 228 FVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDR 287

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           DV+ WN++I  +A+     +A   F  M+ S V PN +T++  LS C   GAL+ G W+H
Sbjct: 288 DVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIH 347

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
            Y++K  +  D  L ++L+DMY+KCGD++ A ++F E+  RD+  W +++ G  MHG GE
Sbjct: 348 AYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGE 407

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           +AL +F  M+ + V+P+ +T +G+L+AC+HAGL+ +G   F  M    GLVPK+EHYGCM
Sbjct: 408 KALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCM 467

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNY 579
           VDLLGR G L EA+++I  MP+  N I+WGA L+A ++H N  +GE+AA ++L ++P++ 
Sbjct: 468 VDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLDPRDP 527

Query: 580 GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
              V++SN+YA   +W+   G+R+ +K+  +KK PG SS+EVNG VH F+ G
Sbjct: 528 WARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVG 579



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 218/456 (47%), Gaps = 45/456 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMR--KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGF 96
           +N+++   ++N   +    +  +M+  + G   +  T   +LKA         G+E+H  
Sbjct: 57  WNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHAS 116

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
            ++ G     +VS AL+  Y  CG +   R +FDEM    +V W+ +IR Y     PE+A
Sbjct: 117 VVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKA 176

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IA 212
           LE+ R MR + + P  VA+ ++VS    + D+ + KA+H      C  EK G+     ++
Sbjct: 177 LELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMH------CFIEKSGIEVDAFVS 230

Query: 213 TALIDMYSKCGNLAYA-------------------------------KQLFNRLNQNSVV 241
           + LI  Y +CG+L YA                               KQLF  +    VV
Sbjct: 231 STLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVV 290

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           SW  MI G+ R  +  E +  F EM    V P+ +T+LS +  C   G L  G W+HAY+
Sbjct: 291 SWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYV 350

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
            +N      ++ ++L+DMY KC +I  A  +F+    +D+  W +++   A     +KA 
Sbjct: 351 DKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKAL 410

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVDVILKTALVDM 420
             F  MK ++V+P++VTMVG+LS C  AG L+ G W    +EK  GL   V     +VD+
Sbjct: 411 HYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVDL 470

Query: 421 YAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMH 455
             + G +  AY L     +  +  +W A ++   +H
Sbjct: 471 LGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVH 506



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 168/348 (48%), Gaps = 35/348 (10%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +  ++ +Y+    P  AL ++  MR+ G   D   I T++ AC  +    + K +H 
Sbjct: 157 LVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHC 216

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSA------------------------------ 125
           F  K+G++ DA+VS+ LI  Y ECGSL  A                              
Sbjct: 217 FIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLEL 276

Query: 126 -RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
            + LF  MP+RDVVSW++MI G+ R G  +EAL    EM F  + P+ + ++S +S  A 
Sbjct: 277 GKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACAS 336

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
              +D G  IHA V +N  D     ++ ++LIDMYSKCG++  A Q+F    +  + +WT
Sbjct: 337 HGALDTGAWIHAYVDKN--DMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWT 394

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR- 303
            ++ G        + +  F++M E  V P ++T++ ++  C   G L  G W    + + 
Sbjct: 395 SIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKV 454

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
            G    +     +VD+ G+   ++ A  L  GM    + +IW A +SA
Sbjct: 455 FGLVPKVEHYGCMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSA 502



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 167/365 (45%), Gaps = 47/365 (12%)

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM--IEENVFPSEITILSLIIECGFVGG 290
           +RL+  +V  W  MI   +    I     L   M  +   + P+  T + L+     V G
Sbjct: 47  SRLDCANVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLK--ALVSG 104

Query: 291 LQL--GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
            ++  G+ +HA ++R GF  S  ++ AL+  Y  C  +   R +FD M+   +++W  +I
Sbjct: 105 QEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLII 164

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
            AY      +KA ELF  M+   + P+ V +  ++S C   G L + K +H +IEK G+E
Sbjct: 165 RAYVCVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIE 224

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIY----------------------------- 439
           VD  + + L+  Y +CG ++ AYR F E                                
Sbjct: 225 VDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSM 284

Query: 440 --RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
             RD+  WN+M+ G+   G  +EAL +F +ME SGV PN +T +  L+AC+  G +  G 
Sbjct: 285 PDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTG- 343

Query: 498 SVFDKMVHGLGLVPKIEHYG----CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
                 +H       +   G     ++D+  + G +D+A ++ +    R ++  W +++ 
Sbjct: 344 ----AWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEE-STRRDLFTWTSIVC 398

Query: 554 ASKLH 558
              +H
Sbjct: 399 GLAMH 403


>gi|242094978|ref|XP_002437979.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
 gi|241916202|gb|EER89346.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
          Length = 657

 Score =  348 bits (892), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 186/519 (35%), Positives = 299/519 (57%), Gaps = 22/519 (4%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
            + +HG ++  G   D +V++AL ++Y +   +  AR +FD +P+ D + W+T++     
Sbjct: 133 ARTLHGLSVAAGYAADTFVASALAKLYFKLSKVDDARKVFDAVPSPDTILWNTLL----- 187

Query: 150 GGLPEE-ALEV-MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
            GLP   ALE  +R +    +RP    + S +   A+ + V +G+ +H   V      K 
Sbjct: 188 AGLPGSVALEAFVRMVEVGRVRPDSTTLASSLRAAAEASHVAMGRCVHGYGV------KC 241

Query: 208 GVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
           G+A    + T L+ +YSKCG++  A+ LF+R+    +V++  +ISGY     +   V LF
Sbjct: 242 GLAEHEHVVTGLMSLYSKCGDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELF 301

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
            E+   +  P+  T++++I      G   L + LHA++++   +    ++ AL  +Y + 
Sbjct: 302 KELAASDWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLYCRL 361

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
            ++ SAR++FD M  K +  WNA+IS YAQ    + A ELF  M+   V+PN  T+   L
Sbjct: 362 NDMESARSIFDAMPEKTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISSTL 421

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
           S C + GAL +G W+H  I K+ LE++V + TAL+DMYAKCG +  A  +F     +++ 
Sbjct: 422 SACAQLGALSLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVV 481

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            WNAM++GYG+HG G EAL  +  M  + + P   TF+ +L ACSH GLV EG+ VF  M
Sbjct: 482 SWNAMISGYGLHGRGAEALKLYKSMLDACILPTSSTFLSVLYACSHGGLVDEGQKVFRVM 541

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP---LRPNMIVWGALLAASKLHKN 560
            +   + P IEH  CMVDLLGRAG L+EA ++I   P   + P   VWGALL+A  +HKN
Sbjct: 542 TNEYRISPGIEHCTCMVDLLGRAGKLNEALDLISEFPQSAIGPG--VWGALLSACMVHKN 599

Query: 561 PSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVA 599
             + ++A+ ++ E++ +N GY VL+SN+Y     +++ A
Sbjct: 600 SDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAA 638



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 241/467 (51%), Gaps = 16/467 (3%)

Query: 20  IIKTHFKFSYTN----IINPLTRYNSLVTSYIKNNKPSS-ALNIYAFMRKNGS-EVDNFT 73
           + K +FK S  +    + + +   ++++ + +    P S AL  +  M + G    D+ T
Sbjct: 155 LAKLYFKLSKVDDARKVFDAVPSPDTILWNTLLAGLPGSVALEAFVRMVEVGRVRPDSTT 214

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           + + L+A A+     +G+ +HG+ +K GL    +V   L+ +YS+CG +  AR LFD M 
Sbjct: 215 LASSLRAAAEASHVAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDCARSLFDRME 274

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
           + D+V+++ +I GY   G+ E ++E+ +E+   D RP+   +++++ +++      L + 
Sbjct: 275 DPDLVAYNALISGYSVNGMVESSVELFKELAASDWRPNSSTLVAVIPVYSPFGHELLARC 334

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           +HA VV+   D      ++TAL  +Y +  ++  A+ +F+ + + ++ SW  MISGY + 
Sbjct: 335 LHAFVVKARLDAD--ALVSTALTTLYCRLNDMESARSIFDAMPEKTMESWNAMISGYAQN 392

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
                 V LF  M E NV P+  TI S +  C  +G L LG W+H  I +   E ++ + 
Sbjct: 393 GLTEMAVELFQLMQELNVQPNPTTISSTLSACAQLGALSLGTWVHRIIAKENLELNVYVM 452

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
            AL+DMY KC  I  AR++FD M +K+V+ WNA+IS Y       +A +L+  M  + + 
Sbjct: 453 TALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISGYGLHGRGAEALKLYKSMLDACIL 512

Query: 374 PNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR 432
           P   T + +L  C+  G ++ G K       +  +   +   T +VD+  + G +N A  
Sbjct: 513 PTSSTFLSVLYACSHGGLVDEGQKVFRVMTNEYRISPGIEHCTCMVDLLGRAGKLNEALD 572

Query: 433 LFSEAIYRDI--CMWNAMMAGYGMHGCGEEA-----LIFFVDMERSG 472
           L SE     I   +W A+++   +H   + A      +F +D E +G
Sbjct: 573 LISEFPQSAIGPGVWGALLSACMVHKNSDLAKLASQKLFELDSENAG 619


>gi|414888053|tpg|DAA64067.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
          Length = 754

 Score =  347 bits (891), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 209/608 (34%), Positives = 325/608 (53%), Gaps = 33/608 (5%)

Query: 37  TRYNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHG 95
           + YN+++++      P  AL   A M + G    D  T    L   A      L +++H 
Sbjct: 125 SSYNTILSA---TPDPDDALAFAARMLRAGDVRPDAITFTVTLSLAAGRGEGRLVRQLHA 181

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG-LPE 154
              + G+  D +V NAL+  Y+   SL +AR +F+EMP RD+VSW+ ++ G  + G  P 
Sbjct: 182 LVSRAGIAADVFVGNALVTAYARGASLDAARKVFEEMPARDLVSWNALVCGLAQDGECPA 241

Query: 155 EALEV-MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----V 209
           E + V +R ++   +RP  +++ S++S       ++LG+ IH   V      KLG    V
Sbjct: 242 EVIRVFLRMLKHGGVRPDRISVCSVISACGGEGKLELGRQIHGFAV------KLGIEGHV 295

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
           +IA  L+ MY KCG    A++LF  + +  VVSWT ++S      +  + V LF  M+ +
Sbjct: 296 SIANVLVAMYYKCGTPGCARRLFEFMGERDVVSWTTVMS-----MDREDAVSLFNGMMRD 350

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            V P+E+T ++++         + G+ +HA  ++ G     A AN+ + MY K R +  A
Sbjct: 351 GVAPNEVTFVAILSAMPGHCPAREGQMVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDA 410

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT-- 387
           + +F  M   +V+ WNA+IS YAQ      A E F+ M V   +P+E T   +LS  T  
Sbjct: 411 KMIFGLMPHPEVIAWNALISGYAQNEMCQDALEAFLSM-VKITKPSETTFASILSAVTAV 469

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
           E  ++  G+  H    K GL     +  AL+D+YAK G +  +++ F E ++R +  W A
Sbjct: 470 ETVSMAYGQMYHCQTLKLGLGASEYVSGALIDLYAKRGSLEESWKAFGETVHRSLIAWTA 529

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV--H 505
           +++    HG  +  +  F DM RSGV P+G+  + +L AC ++G  + G+ +F+ M   H
Sbjct: 530 IISANSKHGNYDGVVSLFNDMARSGVTPDGVVLLSVLTACRYSGFASLGREIFESMATKH 589

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
           G  L P  EHY C+VD+LGRAG L+EA E++  MP  P++    +LL A ++H N  +GE
Sbjct: 590 GAELWP--EHYACVVDMLGRAGRLEEAEELMLQMPSGPSVSAMQSLLGACRIHGNTDVGE 647

Query: 566 IAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL- 624
             A  +LE EP   G  VL+SNIYA    W  VA VRR M+ + VKKE GFS V+  G  
Sbjct: 648 RVAGVLLETEPTESGAYVLLSNIYAEKGDWGAVARVRRKMRGMGVKKEVGFSWVDAGGAN 707

Query: 625 ----VHKF 628
               +HKF
Sbjct: 708 DSLHLHKF 715



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 140/477 (29%), Positives = 236/477 (49%), Gaps = 26/477 (5%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H  A+ +GL   A V+N+L   Y++  S  +A  +F   P+RD  S++T++        
Sbjct: 80  LHALAVISGLAAFAPVTNSLAARYAKGNSFAAAARVFAAAPSRDTSSYNTILSATPD--- 136

Query: 153 PEEALE-VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
           P++AL    R +R  D+RP  +     +SL A   +  L + +HA V R        V +
Sbjct: 137 PDDALAFAARMLRAGDVRPDAITFTVTLSLAAGRGEGRLVRQLHALVSR--AGIAADVFV 194

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-EGVRLFAEMIEE- 269
             AL+  Y++  +L  A+++F  +    +VSW  ++ G  +  E   E +R+F  M++  
Sbjct: 195 GNALVTAYARGASLDAARKVFEEMPARDLVSWNALVCGLAQDGECPAEVIRVFLRMLKHG 254

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            V P  I++ S+I  CG  G L+LG+ +H + ++ G E  +++AN LV MY KC     A
Sbjct: 255 GVRPDRISVCSVISACGGEGKLELGRQIHGFAVKLGIEGHVSIANVLVAMYYKCGTPGCA 314

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDK--AFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           R LF+ M  +DV+ W  V+S       +D+  A  LF  M    V PNEVT V +LS   
Sbjct: 315 RRLFEFMGERDVVSWTTVMS-------MDREDAVSLFNGMMRDGVAPNEVTFVAILSAMP 367

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
                  G+ +H    K GL        + + MYAK   ++ A  +F    + ++  WNA
Sbjct: 368 GHCPAREGQMVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDAKMIFGLMPHPEVIAWNA 427

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-- 505
           +++GY  +   ++AL  F+ M +   KP+  TF  +L+A +    V+     + +M H  
Sbjct: 428 LISGYAQNEMCQDALEAFLSMVKI-TKPSETTFASILSAVTAVETVS---MAYGQMYHCQ 483

Query: 506 --GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
              LGL       G ++DL  + G L+E+ +       R ++I W A+++A+  H N
Sbjct: 484 TLKLGLGASEYVSGALIDLYAKRGSLEESWKAFGETVHR-SLIAWTAIISANSKHGN 539


>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 640

 Score =  347 bits (891), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 188/600 (31%), Positives = 327/600 (54%), Gaps = 49/600 (8%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+  + +NN+  +A   +  M +      NFTI ++LKA +++     G  ++G A+
Sbjct: 70  WTALIHGFTENNQYENAFAFFIKMHRENIVPLNFTIASVLKAVSRLGRIKDGDLVYGLAV 129

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G + D  V N +I+++  CG + SAR +FDEM  RD VSW++MI GY   G  + A +
Sbjct: 130 RCGYEFDLVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYGNNGRVDIARK 189

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M   ++    ++  SM+  +    D+     + A V+     EK  +A    ++  
Sbjct: 190 LFDRMEERNV----ISWTSMIQGYVKAGDL-----LEARVLFERMPEK-DLASWKVMVSA 239

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y   GNL  A+ LF  +  + V +W +MISG  +  E++     F  M E NV       
Sbjct: 240 YMSVGNLVAARNLFELMPIHDVGTWNLMISGCCKAGEMDAAKEFFDRMQERNV------- 292

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
                            W+                  ++D Y K  ++ +AR++FD M  
Sbjct: 293 ---------------ASWV-----------------MIIDGYIKVGDVDAARSVFDQMPE 320

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K+++ W+ +I  YA+      + +L+   K   ++P+E   +G++S C++ G  +  + +
Sbjct: 321 KNLVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISACSQLGVPDTAESV 380

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
                   L  ++ + T+L+DMYAKCG++  A ++F     +D+  ++ ++  +  HG  
Sbjct: 381 ICDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLS 440

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           E+A+  F +M+++ +KP+G+ F+G+L AC+H GLV EG+ +F +M+   G+ P  +HY C
Sbjct: 441 EDAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYAC 500

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVD+LGRAG L+EAH +I SMP+ PN  VWGALL+A ++H N  + E AAT++ +IEP N
Sbjct: 501 MVDILGRAGCLEEAHSLICSMPVAPNATVWGALLSACRVHLNVQLAEAAATELFQIEPNN 560

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
            G  VL+ NIYA A +W+D + VR +++E RV+K  G S +E+  ++H+F+ G   ++ S
Sbjct: 561 SGNYVLLFNIYADAGQWDDFSKVRAMIRENRVRKNRGSSWIELGSVIHEFVMGDKSHFDS 620



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 143/289 (49%), Gaps = 12/289 (4%)

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+ +YSK G ++YA +LF+   + +   WT +I G+   N+       F +M  EN+ P 
Sbjct: 42  LLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENNQYENAFAFFIKMHRENIVPL 101

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
             TI S++     +G ++ G  ++   +R G+EF L + N +++++ +C E+ SAR +FD
Sbjct: 102 NFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQMFD 161

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M+ +D + WN++I+ Y     +D A +LF  M+      N ++   ++    +AG L  
Sbjct: 162 EMEERDAVSWNSMITGYGNNGRVDIARKLFDRME----ERNVISWTSMIQGYVKAGDLLE 217

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
            + L   +     E D+     +V  Y   G++  A  LF      D+  WN M++G   
Sbjct: 218 ARVLFERMP----EKDLASWKVMVSAYMSVGNLVAARNLFELMPIHDVGTWNLMISGCCK 273

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            G  + A  FF  M+   V     +++ +++     G V   +SVFD+M
Sbjct: 274 AGEMDAAKEFFDRMQERNVA----SWVMIIDGYIKVGDVDAARSVFDQM 318



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 117/246 (47%), Gaps = 10/246 (4%)

Query: 297 LHAYILRNGFEFSLAMA-NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
           +HA++L +G   S  +  N L+ +Y K   +  A  LFD     +  +W A+I  + + +
Sbjct: 22  IHAHLLISGSIASSDLTLNKLLRLYSKFGAVSYAHKLFDETPEPNSFLWTALIHGFTENN 81

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
             + AF  FI M    + P   T+  +L   +  G ++ G  ++    + G E D+++K 
Sbjct: 82  QYENAFAFFIKMHRENIVPLNFTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKN 141

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
            +++++ +CG++  A ++F E   RD   WN+M+ GYG +G  + A   F  ME   V  
Sbjct: 142 VMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYGNNGRVDIARKLFDRMEERNV-- 199

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEM 535
             I++  ++     AG + E + +F++M         +  +  MV      G L  A  +
Sbjct: 200 --ISWTSMIQGYVKAGDLLEARVLFERMPE-----KDLASWKVMVSAYMSVGNLVAARNL 252

Query: 536 IKSMPL 541
            + MP+
Sbjct: 253 FELMPI 258



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 78/145 (53%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +++++  Y K   P S+L +Y   ++ G + D      I+ AC+Q+ +    + +  
Sbjct: 323 LVAWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISACSQLGVPDTAESVIC 382

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +   L  +  V  +LI MY++CG++  A  +F+ +  +D+  +ST+I  +   GL E+
Sbjct: 383 DFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSED 442

Query: 156 ALEVMREMRFMDIRPSEVAMISMVS 180
           A+ +  EM+  +I+P  VA + +++
Sbjct: 443 AISLFSEMQKANIKPDGVAFLGVLT 467


>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 643

 Score =  347 bits (891), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 203/550 (36%), Positives = 293/550 (53%), Gaps = 47/550 (8%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALI--QMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           K++H +  K GLD D  ++  L+     S   +L  AR LF   PN DV   +T+IRG  
Sbjct: 22  KQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFPNPDVFMHNTLIRGLA 81

Query: 149 RGGLPEEALEVMREMRFMDIRP-SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
               P+ +L    EMR     P    +   ++   A    ++ G  +H   + +  D  L
Sbjct: 82  ESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGIQLHCQAIVHGLDTHL 141

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            V   T L+ MYS+CG +A+AK++F  + + +VV+W  +++   RC ++     +F  M 
Sbjct: 142 FVG--TTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCGDVKGADMMFNRMP 199

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
             N                      L  W                 N ++  Y K  E+ 
Sbjct: 200 FRN----------------------LTSW-----------------NVMLAGYTKAGELE 220

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            AR LF  M  KD + W+ +I  +A      +AF  F  ++   +RPNEV++ G LS C 
Sbjct: 221 LARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACA 280

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI--YRDICMW 445
           +AGA+E GK LH +IEK G    V +  AL+D Y+KCG+V G  RL  E +   R I  W
Sbjct: 281 DAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNV-GMARLVFERMPEKRSIVSW 339

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
            +M+AG  MHG GEEA+  F +ME SG++P+GI FI +L ACSHAGL+ +G   F KM  
Sbjct: 340 TSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKD 399

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
              + P IEHYGCMVDL GRAG LD+A+E I  MP+ P  I+W  LL A  +H N  + E
Sbjct: 400 IYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAE 459

Query: 566 IAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLV 625
               ++ E++P N G +VL+SNIYAVA +W DVA VRR M + R+ K PG+S +EV+ ++
Sbjct: 460 RVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIM 519

Query: 626 HKFIRGGMVN 635
           + F+ G + N
Sbjct: 520 YSFVAGEVQN 529



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 192/437 (43%), Gaps = 108/437 (24%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKN-GSEVDNFTIPTILKACAQVLM 86
           + +  NP +  +N+L+    +++ P ++L  +  MR+   + +D+F+   +LKA A    
Sbjct: 62  FLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRS 121

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE--------------- 131
              G ++H  AI +GLD   +V   L+ MYSECG +  A+ +F+E               
Sbjct: 122 LESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTA 181

Query: 132 ----------------MPNRDVVSWSTMIRGYHRGGLPE--------------------- 154
                           MP R++ SW+ M+ GY + G  E                     
Sbjct: 182 CFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMI 241

Query: 155 ----------EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
                     EA    RE++ + +RP+EV++   +S  AD   ++ GK +H  +      
Sbjct: 242 VGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFI------ 295

Query: 205 EKLG----VAIATALIDMYSKCGNLAYAKQLFNRL-NQNSVVSWTVMISGYIRCNEINEG 259
           EK G    V++  AL+D YSKCGN+  A+ +F R+  + S+VSWT MI+G        E 
Sbjct: 296 EKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEA 355

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
           ++LF EM E  + P  I  +S++  C            HA ++  G+E+   M     D+
Sbjct: 356 IQLFHEMEESGIRPDGIAFISILYACS-----------HAGLIEKGYEYFYKMK----DI 400

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
           Y     I  A           +  +  ++  Y +A  +DKA+E  IHM    V P  +  
Sbjct: 401 YN----IEPA-----------IEHYGCMVDLYGRAGQLDKAYEFIIHM---PVLPTAIIW 442

Query: 380 VGLLSLCTEAGALEMGK 396
             LL  C+  G +++ +
Sbjct: 443 RTLLGACSIHGNVKLAE 459



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/365 (23%), Positives = 145/365 (39%), Gaps = 80/365 (21%)

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALV--DMYGKCREIRSARTLFDGMK 337
           SL+  C  +  L   K +HAY+ + G +    +A  L+          +  AR LF    
Sbjct: 10  SLLTNCRSLKNL---KQVHAYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHFP 66

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP-NEVTMVGLLSLCTEAGALEMGK 396
           + DV + N +I   A++     +   F+ M+     P +  +   LL       +LE G 
Sbjct: 67  NPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESGI 126

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYA-------------------------------KCG 425
            LH      GL+  + + T LV MY+                               +CG
Sbjct: 127 QLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVAWNAVVTACFRCG 186

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE-------------------------- 459
           DV GA  +F+   +R++  WN M+AGY   G  E                          
Sbjct: 187 DVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAH 246

Query: 460 -----EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLV 510
                EA  FF ++++ G++PN ++  G L+AC+ AG +      F K++HG     G +
Sbjct: 247 NGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIE-----FGKILHGFIEKSGFL 301

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
             +     ++D   + G +  A  + + MP + +++ W +++A   +H     GE A   
Sbjct: 302 WMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMH---GYGEEAIQL 358

Query: 571 ILEIE 575
             E+E
Sbjct: 359 FHEME 363


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  347 bits (891), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 197/634 (31%), Positives = 340/634 (53%), Gaps = 45/634 (7%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRK------------------NGSEVD---------- 70
           YNSL++ Y K+   + A +++  MR+                  NG E+D          
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159

Query: 71  ------NFTIPTILKACAQVLMTHLGKEIHGFAIKNG-LDGDAYVSNALIQMYSEC-GSL 122
                 ++    +++AC+      +G+   GF +K G  + D  V  +LI M+ +   S 
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF 219

Query: 123 VSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLF 182
            +A  +FD+M   +VV+W+ MI    + G P EA+    +M        +  + S+ S  
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279

Query: 183 ADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC---GNLAYAKQLFNRLNQNS 239
           A++ ++ LGK +H+  +R+     L   +  +L+DMY+KC   G++   +++F+R+  +S
Sbjct: 280 AELENLSLGKQLHSWAIRS----GLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHS 335

Query: 240 VVSWTVMISGYIR-CNEINEGVRLFAEMIEE-NVFPSEITILSLIIECGFVGGLQLGKWL 297
           V+SWT +I+GY++ CN   E + LF+EMI + +V P+  T  S    CG +   ++GK +
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
                + G   + ++AN+++ M+ K   +  A+  F+ +  K+++ +N  +    +    
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
           ++AF+L   +   ++  +  T   LLS     G++  G+ +H+ + K GL  +  +  AL
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515

Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
           + MY+KCG ++ A R+F+    R++  W +M+ G+  HG     L  F  M   GVKPN 
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK 537
           +T++ +L+ACSH GLV+EG   F+ M     + PK+EHY CMVDLL RAGLL +A E I 
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635

Query: 538 SMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWND 597
           +MP + +++VW   L A ++H N  +G++AA +ILE++P      + +SNIYA A +W +
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695

Query: 598 VAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
              +RR MKE  + KE G S +EV   +HKF  G
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVG 729



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 255/541 (47%), Gaps = 15/541 (2%)

Query: 28  SYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNG-SEVDNFTIPTILKACAQVLM 86
           S  ++ N +   + L+  ++       A++    M ++G   +D+ T  ++LK+C +   
Sbjct: 18  SQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARD 77

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP---NRDVVSWSTM 143
             LGK +H   I+  ++ D+ + N+LI +YS+ G    A  +F+ M     RDVVSWS M
Sbjct: 78  FRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAM 137

Query: 144 IRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
           +  Y   G   +A++V  E   + + P++    +++   ++   V +G+     +++   
Sbjct: 138 MACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGH 197

Query: 204 DEKLGVAIATALIDMYSKCGN-LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
            E   V +  +LIDM+ K  N    A ++F+++++ +VV+WT+MI+  ++     E +R 
Sbjct: 198 FES-DVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRF 256

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F +M+       + T+ S+   C  +  L LGK LH++ +R+G    +    +LVDMY K
Sbjct: 257 FLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAK 314

Query: 323 CR---EIRSARTLFDGMKSKDVMIWNAVISAYAQ-AHCIDKAFELFIHMKVS-KVRPNEV 377
           C     +   R +FD M+   VM W A+I+ Y +  +   +A  LF  M     V PN  
Sbjct: 315 CSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHF 374

Query: 378 TMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
           T       C       +GK +     K+GL  +  +  +++ M+ K   +  A R F   
Sbjct: 375 TFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL 434

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
             +++  +N  + G   +   E+A     ++    +  +  TF  LL+  ++ G + +G+
Sbjct: 435 SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE 494

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
            +  ++V  LGL         ++ +  + G +D A  +   M  R N+I W +++     
Sbjct: 495 QIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR-NVISWTSMITGFAK 552

Query: 558 H 558
           H
Sbjct: 553 H 553


>gi|413951361|gb|AFW84010.1| hypothetical protein ZEAMMB73_045792 [Zea mays]
          Length = 917

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 203/595 (34%), Positives = 336/595 (56%), Gaps = 10/595 (1%)

Query: 30  TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL 89
           +N+   L  +N+++   ++N + + AL +   MR   ++ D  T+ TI+  CA   +   
Sbjct: 327 SNLNRNLVSWNAMIKGLVQNERVTEALAVLRQMRLE-NQPDVATLVTIVSGCADQGLLSE 385

Query: 90  GKEIHGFAIKNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           G+ +HG+ I+ GL   +  + N+L+ +Y +C    +A  LF  MP RD++SW+TMI GY 
Sbjct: 386 GETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAGLLFMTMPRRDLISWNTMISGYS 445

Query: 149 R-GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
           R G L EEA  + + +       S   M++++   +   ++  GKA+H+  ++ C     
Sbjct: 446 RYGPLREEAQLMFKGLLSEGSSCSLATMLAVIPSCSIPEELSFGKALHSFSLK-CGFTSS 504

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRL-NQNSVVSWTVMISGYIRCNEIN-EGVRLFAE 265
           GV+   ALI MY  CG+   A  L  R+   + ++SW  +I G ++ NE++ + + +F  
Sbjct: 505 GVSAVNALIHMYMSCGDPLAAFSLIERIIPVSDIISWNTVIVGCLQ-NELHKDALEIFRF 563

Query: 266 M-IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           M     + P  ITI+S++  CG +  L LGK +H  IL++ F  +L + N+L+ MY +  
Sbjct: 564 MYCSLAINPDSITIVSVLSACGDLNLLALGKSIHCMILKHLFASNLRVKNSLLTMYFRFG 623

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
           + RSA  +F  M   ++  WN +IS +AQ +   +A + +   K+    PNE+++VG++ 
Sbjct: 624 DTRSAELVFYSMGDTNLCSWNCMISGFAQNNKGWRALQFY--QKMEDFEPNEISVVGIIC 681

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
            CT+ G    GK +H ++ +  L  +V +  +LVDMY KCG ++ A R+F  +  + I  
Sbjct: 682 ACTQLGGYRQGKSIHGHVFRSVLHNNVFISASLVDMYCKCGRLDIAVRVFEASAEKSIAG 741

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           WN++++ +G HG G +++  F  M  SG+K    TFI LL+ACSH+GLV EG   +  M 
Sbjct: 742 WNSLISAFGFHGHGMKSIDLFWKMHDSGMKATKSTFIALLSACSHSGLVDEGWKYYCLMS 801

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
              G+ P  EH+ C+VD+LGRAG L EAH+ ++S+P +    +WGALL A        MG
Sbjct: 802 EKFGITPAPEHHVCIVDMLGRAGRLQEAHKFVESLPSQQTHGIWGALLNACSSRSELKMG 861

Query: 565 EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           E  A  +L +EP N GY V  +N+YA  + W+ VA VR V+++  + K  G S+V
Sbjct: 862 ESIAKHLLHLEPGNSGYYVTAANLYAYKDMWSGVAQVRSVLQDKGLVKPHGRSTV 916



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 142/469 (30%), Positives = 242/469 (51%), Gaps = 10/469 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+ V +   + +   A  ++  M +   E D+ T+  +L   ++      G E+HG A 
Sbjct: 130 WNAAVGALTTSCRYDDAAALFRRMARELGEFDSTTVVVMLSGASRAGNLRRGMELHGMAA 189

Query: 99  KNGLDGDAYVS-NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           K+ L      + NAL+ MY++CG   SA  +F  MP RD  SW+++I G    GL E + 
Sbjct: 190 KSCLGAHCLGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSIFNGLAEVSA 249

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADV-DLGKAIHACVVRNCKDEKLGVAIATALI 216
              REM     +P EV++ S++S  + + D+   G+++H+C V+   ++    ++A +L+
Sbjct: 250 CYFREMSCSIFQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASCSVANSLV 309

Query: 217 DMYSKCGNLAYAKQLF-NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
             YS+ G    AK++F + LN+N +VSW  MI G ++   + E + +  +M  EN  P  
Sbjct: 310 TFYSEFGMPEAAKKVFASNLNRN-LVSWNAMIKGLVQNERVTEALAVLRQMRLENQ-PDV 367

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTLFD 334
            T+++++  C   G L  G+ LH Y++R G      +M N+L+D+Y KC E  +A  LF 
Sbjct: 368 ATLVTIVSGCADQGLLSEGETLHGYVIRKGLLREEPSMGNSLLDLYLKCDEPSNAGLLFM 427

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEV-TMVGLLSLCTEAGALE 393
            M  +D++ WN +IS Y++   + +  +L     +S+     + TM+ ++  C+    L 
Sbjct: 428 TMPRRDLISWNTMISGYSRYGPLREEAQLMFKGLLSEGSSCSLATMLAVIPSCSIPEELS 487

Query: 394 MGKWLHTYIEKQGLEVD-VILKTALVDMYAKCGDVNGAYRLFSEAI-YRDICMWNAMMAG 451
            GK LH++  K G     V    AL+ MY  CGD   A+ L    I   DI  WN ++ G
Sbjct: 488 FGKALHSFSLKCGFTSSGVSAVNALIHMYMSCGDPLAAFSLIERIIPVSDIISWNTVIVG 547

Query: 452 YGMHGCGEEALIFFVDMERS-GVKPNGITFIGLLNACSHAGLVTEGKSV 499
              +   ++AL  F  M  S  + P+ IT + +L+AC    L+  GKS+
Sbjct: 548 CLQNELHKDALEIFRFMYCSLAINPDSITIVSVLSACGDLNLLALGKSI 596



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 4/218 (1%)

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           + DV++WNA + A   +   D A  LF  M       +  T+V +LS  + AG L  G  
Sbjct: 124 APDVILWNAAVGALTTSCRYDDAAALFRRMARELGEFDSTTVVVMLSGASRAGNLRRGME 183

Query: 398 LHTYIEKQGLEVDVILK-TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
           LH    K  L    +    ALVDMYAKCG+   A  +F     RD   WN++++G   +G
Sbjct: 184 LHGMAAKSCLGAHCLGAWNALVDMYAKCGEFRSAEVVFHSMPCRDTTSWNSVISGSIFNG 243

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSH-AGLVTEGKSVFDKMVH-GLGLVPKIE 514
             E +  +F +M  S  +P+ ++   +L+ACS    L + G+SV    V  G        
Sbjct: 244 LAEVSACYFREMSCSIFQPDEVSLSSVLSACSRLDDLFSFGESVHSCAVKLGYEDTASCS 303

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
               +V      G+ + A ++  S  L  N++ W A++
Sbjct: 304 VANSLVTFYSEFGMPEAAKKVFAS-NLNRNLVSWNAMI 340


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 199/609 (32%), Positives = 336/609 (55%), Gaps = 21/609 (3%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL-GK 91
           +  L  + ++ +   +N   + AL ++    + G   + FT+    +AC    + HL G 
Sbjct: 114 LRDLVSWTAMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGG 173

Query: 92  EIHGFAIKNGLDG-DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
            + G   K G  G D  V  ALI M+++ G LV+ R +FD +  R VV W+ +I  Y + 
Sbjct: 174 AVLGLVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQS 233

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV- 209
           G  +EA+E+  +M     +P +  + SM+S   ++    LG+ +H+  +R      LG+ 
Sbjct: 234 GYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALR------LGLE 287

Query: 210 ---AIATALIDMYSKCGN---LAYAKQLFNRLNQNSVVSWTVMISGYI-RCNEINEGVRL 262
               ++  L+DMY+K  N   L  A+++FNR+ +++V++WT ++SGY+ R ++ N+ + L
Sbjct: 288 SDSCVSCGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMIL 347

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F +M+ E + P+ IT  S++  C  +G    G+ +H + +++       + NALV MY +
Sbjct: 348 FCKMLNEGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAE 407

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
              I  AR  FD +  K+++ ++  +    +++           ++  ++  +  T   L
Sbjct: 408 SGSIEEARHAFDQLYEKNMVSFSGNLDGDGRSNTYQD-----YQIERMELGISTFTFGSL 462

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           +S     G L  G+ LH    K G   D  +  +LV MY++CG +  A ++F E    ++
Sbjct: 463 ISAAASVGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNV 522

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             W +M++G   HG    AL  F DM  +GVKPN +T+I +L+ACSHAGLV EGK  F  
Sbjct: 523 ISWTSMISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRM 582

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
           M    GL+P++EHY CMVDLLGR+GL+++A + I  MP + + +VW  LL A K H N  
Sbjct: 583 MQKHHGLIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMD 642

Query: 563 MGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
           +GEIAA  ++++EPQ+    VL+SN+YA A  W+ VA +R +M++  + KE G S + V+
Sbjct: 643 IGEIAANHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVD 702

Query: 623 GLVHKFIRG 631
             +H+F  G
Sbjct: 703 NTIHEFRAG 711



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 246/486 (50%), Gaps = 29/486 (5%)

Query: 88  HLGKEIHGFAIKNG--LDGDAYVSNALIQMYSECGSLVSARYLFDEMPN--RDVVSWSTM 143
           HLG+ + G  ++ G  L+ DA V+N+L+ +YS+C ++ +AR +FD MP   RD+VSW+ M
Sbjct: 64  HLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAM 123

Query: 144 IRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV-SLFADVADVDLGKAIHACVVRNC 202
                R G   EAL +  E     + P+   + +   + FA       G A+   V    
Sbjct: 124 ASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLGLVF--- 180

Query: 203 KDEKLG-----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN 257
              KLG     V++  ALIDM++K G+L   +++F+ L + +VV WT++I+ Y +    +
Sbjct: 181 ---KLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSD 237

Query: 258 EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALV 317
           E V LF +M+E    P + T+ S++  C  +G  +LG+ LH+  LR G E    ++  LV
Sbjct: 238 EAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLV 297

Query: 318 DMYGKC---REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID-KAFELFIHMKVSKVR 373
           DMY K    + + +AR +F+ M   +VM W A++S Y Q    D +   LF  M    +R
Sbjct: 298 DMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIR 357

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           PN +T   +L  C   G  + G+ +HT+  K  L    ++  ALV MYA+ G +  A   
Sbjct: 358 PNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHA 417

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F +   +++  ++  + G G     ++  I     ER  +  +  TF  L++A +  G++
Sbjct: 418 FDQLYEKNMVSFSGNLDGDGRSNTYQDYQI-----ERMELGISTFTFGSLISAAASVGML 472

Query: 494 TEGKSVFD-KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           T+G+ +    +  G G    I +   +V +  R G L +A ++   M    N+I W +++
Sbjct: 473 TKGQRLHALSLKAGFGSDRAIGN--SLVSMYSRCGYLVDACQVFDEMN-DHNVISWTSMI 529

Query: 553 AASKLH 558
           +    H
Sbjct: 530 SGLAKH 535



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 176/331 (53%), Gaps = 18/331 (5%)

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL--NQNSVVSWT 244
           D+ LG+A+   ++R     +    +A +L+ +YSKC  +A A+ +F+ +      +VSWT
Sbjct: 62  DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC------GFVGGLQLGKWLH 298
            M S   R     E +RLF E +EE + P+  T+ +    C         GG  LG    
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLAGGAVLG---- 177

Query: 299 AYILRNGF-EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
             + + GF    +++  AL+DM+ K  ++ + R +FDG+  + V++W  +I+ YAQ+   
Sbjct: 178 -LVFKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYS 236

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
           D+A ELF+ M  +  +P++ T+  +LS CTE G+  +G+ LH+   + GLE D  +   L
Sbjct: 237 DEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGL 296

Query: 418 VDMYAKCGD---VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE-EALIFFVDMERSGV 473
           VDMYAK  +   ++ A  +F+     ++  W A+++GY   G  + + +I F  M   G+
Sbjct: 297 VDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGI 356

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           +PN IT+  +L AC++ G    G+ +    V
Sbjct: 357 RPNHITYSSMLKACANLGDQDSGRQIHTHCV 387


>gi|302142318|emb|CBI19521.3| unnamed protein product [Vitis vinifera]
          Length = 768

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 196/568 (34%), Positives = 304/568 (53%), Gaps = 49/568 (8%)

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G +   Y++ A +  Y + G +  A++LF+EMP RDVVSW+ +I GY R G   +ALE
Sbjct: 186 KSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALE 245

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA----------CVVRNC------ 202
           V  +M      P +  ++ +V        +  GKAIH           C V+N       
Sbjct: 246 VFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYA 305

Query: 203 ---------------------------KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL 235
                                      + E++ V   T ++  Y+ CGN+  A  L+N +
Sbjct: 306 KFSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIIMCSYAGCGNIESAGLLYNLM 365

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI---IECGFVGGLQ 292
            Q ++VS T MISGY     +   V  F +M++  + P  + ++S++    +  F+G   
Sbjct: 366 PQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGS-- 423

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
            G  +HAY L+ G      + N L+ MY K  +I +  +LF  M  K ++ WN+VISA  
Sbjct: 424 -GLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACI 482

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
           Q      A ELF  M++    P+ +T+  LL+ C+E G L+ G+ LH Y+ +  L+++  
Sbjct: 483 QVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDF 542

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG 472
           L+TALVDMY KCG +  A R+F       +  WN M++GYG+ G    AL  + +M+  G
Sbjct: 543 LETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQG 602

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
           +KP+ ITF+G+L+AC+H GLV EGK  F  M    G++P ++H  CMVDLL RAG L+EA
Sbjct: 603 LKPDRITFLGVLSACTHGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEA 662

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVA 592
              +K+M + P+  +WGALL +  +H+   +GE  A ++L ++  + G  VLMSN+YA  
Sbjct: 663 VIFVKNMEVEPDSAIWGALLTSCCIHQELKLGECLAKRLLLLDYYSGGLYVLMSNLYASK 722

Query: 593 NRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
            RW+DVA VR++MK+       G S +E
Sbjct: 723 GRWDDVARVRKMMKDTGGDGSSGISLIE 750



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 154/330 (46%), Gaps = 8/330 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L    ++++ Y +       +  +  M +   + D   + +IL           G  IH 
Sbjct: 370 LVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHA 429

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + +K GL  D  V N LI MYS+ G + +   LF EM  + ++SW+++I    + G   +
Sbjct: 430 YGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSD 489

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+E+  +MR     P  + + S+++  ++V  +  G+ +H  V+RN  D  +   + TAL
Sbjct: 490 AMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLD--MEDFLETAL 547

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY KCG L  A+++F  + +  + +W  MISGY      +  +  ++EM E+ + P  
Sbjct: 548 VDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDR 607

Query: 276 ITILSLIIECGFVGGLQLGK-WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           IT L ++  C   G +  GK +  +     G    L     +VD+  +   +  A     
Sbjct: 608 ITFLGVLSACTHGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVK 667

Query: 335 GMK-SKDVMIWNAVISAYAQAHCIDKAFEL 363
            M+   D  IW A+++    + CI +  +L
Sbjct: 668 NMEVEPDSAIWGALLT----SCCIHQELKL 693



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 40/268 (14%)

Query: 239 SVVSWTVMISGYIRCNEINE---GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL-- 293
           S+ + +V  S +  C+E  +       F  ++E NV PS++T  SL+I+  +V       
Sbjct: 109 SIPNISVFHSLFKSCSETKDSRWAFITFRRLLESNVKPSDLT-FSLLIK-AYVADASSST 166

Query: 294 ----------GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
                        +  ++ ++GF   + +  A +D YGK   I  A+ LF+ M  +DV+ 
Sbjct: 167 VIDSPNTKIEANQIQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVS 226

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           WNA+I  Y++      A E+F+ M      P + T+VGL+  C     +  GK +H +  
Sbjct: 227 WNALICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGI 286

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
           K GL++D  +K AL  MYAK          FS         WN M+  YG +G  +EA++
Sbjct: 287 KSGLDLDCRVKNALTSMYAK----------FS---------WNTMIGAYGQNGLFDEAML 327

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAG 491
            F  M++  V+ N +T I     CS+AG
Sbjct: 328 VFKQMQKERVEVNYVTII----MCSYAG 351



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 110/269 (40%), Gaps = 48/269 (17%)

Query: 293 LGKWLHAYILRNGFEF---SLAMANALVDMYGKCREIRSAR---TLFDGMKSKDVMIWNA 346
           +G ++   + R G EF   S+   +    ++  C E + +R     F  +   +V   + 
Sbjct: 90  IGHYVRTTLPRIGLEFILPSIPNISVFHSLFKSCSETKDSRWAFITFRRLLESNVKPSDL 149

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
             S   +A+  D +    I    +K+  N++                      T++ K G
Sbjct: 150 TFSLLIKAYVADASSSTVIDSPNTKIEANQI---------------------QTHLRKSG 188

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
               V L TA +D Y K G +  A  LF E   RD+  WNA++ GY  +G   +AL  FV
Sbjct: 189 FNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEVFV 248

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE------------ 514
            M R G  P   T +GL+ +C    ++ +GK+     +HG G+   ++            
Sbjct: 249 QMLREGFPPCQRTLVGLVPSCGRPDIIFQGKA-----IHGFGIKSGLDLDCRVKNALTSM 303

Query: 515 ----HYGCMVDLLGRAGLLDEAHEMIKSM 539
                +  M+   G+ GL DEA  + K M
Sbjct: 304 YAKFSWNTMIGAYGQNGLFDEAMLVFKQM 332


>gi|242067895|ref|XP_002449224.1| hypothetical protein SORBIDRAFT_05g006590 [Sorghum bicolor]
 gi|241935067|gb|EES08212.1| hypothetical protein SORBIDRAFT_05g006590 [Sorghum bicolor]
          Length = 570

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 198/537 (36%), Positives = 295/537 (54%), Gaps = 13/537 (2%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IH  AI  G+  +   + +LI   +   SL  AR +FD  P RD   W+T++R +     
Sbjct: 35  IHARAIVLGVSANLAFATSLIAGAAP-ASLAYARRVFDAAPVRDAYMWNTLLRAHAHSHS 93

Query: 153 PE--------EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
                     +AL + + MR   + P       ++   A      LG+A+H   VR   D
Sbjct: 94  HSQSSHSHAVDALALYKRMRAAGVAPDHYTYPIVLPACAAARQPRLGRAVHGDAVRFALD 153

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS--VVSWTVMISGYIRCNEINEGVRL 262
              G    T LI MY + G +A A+ +F   + +S  VVSWT M++GY++     E + L
Sbjct: 154 GD-GFVRCT-LIAMYFQEGEVADAELVFAESHGSSRTVVSWTAMVAGYVQNYFFGEALAL 211

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F+ M+ E V P+EIT++S +        L  G+ +H +++R+GF+ ++ +ANAL+ MYGK
Sbjct: 212 FSTMVAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVIRSGFDANIPLANALIAMYGK 271

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C  I  A  LF+GM  + ++ WN +++ Y Q   + +A + F  M   KV  + VT+V +
Sbjct: 272 CGSIPMAEALFEGMAVRSLVSWNTMVAIYEQHGDVVEAIKFFHRMLTEKVGFDCVTLVSV 331

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           LS C  +GALE GKW+H +    GL+ D  +   LVDMYAKCG++  A ++F     R +
Sbjct: 332 LSACGRSGALETGKWVHEFARSHGLDADARIGNVLVDMYAKCGEIADARKVFDCLHVRGV 391

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             W+AM++ Y  HG  EEAL  F  M+  GV+PN  TF  +L AC H+GLV EG   F+ 
Sbjct: 392 VSWSAMISAYANHGDSEEALKLFCLMKSEGVRPNSFTFTAVLVACGHSGLVNEGLKHFNS 451

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
           ++    + P +EHY C+VD+LGRAG L EA+E+I+ M L P+  VWGA L   KLH N  
Sbjct: 452 ILSDYQMSPTLEHYACIVDMLGRAGRLVEAYEIIRGMSLCPDKCVWGAFLGGCKLHSNLE 511

Query: 563 MGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           + E  A  + +    +  + VLMSN+Y  A    D   +RR MKE+ +KK  G S+V
Sbjct: 512 LAEFVAKDLFQSGSNDVTFYVLMSNMYFEAGMLEDAERIRRAMKEMELKKTAGHSAV 568



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 149/454 (32%), Positives = 237/454 (52%), Gaps = 9/454 (1%)

Query: 55  ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
           AL +Y  MR  G   D++T P +L ACA      LG+ +HG A++  LDGD +V   LI 
Sbjct: 105 ALALYKRMRAAGVAPDHYTYPIVLPACAAARQPRLGRAVHGDAVRFALDGDGFVRCTLIA 164

Query: 115 MYSECGSLVSARYLFDEM--PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSE 172
           MY + G +  A  +F E    +R VVSW+ M+ GY +     EAL +   M    + P+E
Sbjct: 165 MYFQEGEVADAELVFAESHGSSRTVVSWTAMVAGYVQNYFFGEALALFSTMVAEGVLPNE 224

Query: 173 VAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLF 232
           + +IS +        +D G+ +H  V+R+  D    + +A ALI MY KCG++  A+ LF
Sbjct: 225 ITLISFLPCLQGQEWLDAGEMVHGFVIRSGFDAN--IPLANALIAMYGKCGSIPMAEALF 282

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
             +   S+VSW  M++ Y +  ++ E ++ F  M+ E V    +T++S++  CG  G L+
Sbjct: 283 EGMAVRSLVSWNTMVAIYEQHGDVVEAIKFFHRMLTEKVGFDCVTLVSVLSACGRSGALE 342

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
            GKW+H +   +G +    + N LVDMY KC EI  AR +FD +  + V+ W+A+ISAYA
Sbjct: 343 TGKWVHEFARSHGLDADARIGNVLVDMYAKCGEIADARKVFDCLHVRGVVSWSAMISAYA 402

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDV 411
                ++A +LF  MK   VRPN  T   +L  C  +G +  G K  ++ +    +   +
Sbjct: 403 NHGDSEEALKLFCLMKSEGVRPNSFTFTAVLVACGHSGLVNEGLKHFNSILSDYQMSPTL 462

Query: 412 ILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
                +VDM  + G +  AY +    ++  D C+W A + G  +H   E A     D+ +
Sbjct: 463 EHYACIVDMLGRAGRLVEAYEIIRGMSLCPDKCVWGAFLGGCKLHSNLELAEFVAKDLFQ 522

Query: 471 SGVKPNGITFIGLL-NACSHAGLVTEGKSVFDKM 503
           SG   N +TF  L+ N    AG++ + + +   M
Sbjct: 523 SG--SNDVTFYVLMSNMYFEAGMLEDAERIRRAM 554



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 176/361 (48%), Gaps = 13/361 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + ++V  Y++N     AL +++ M   G   +  T+ + L           G+ +HGF I
Sbjct: 192 WTAMVAGYVQNYFFGEALALFSTMVAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVI 251

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++G D +  ++NALI MY +CGS+  A  LF+ M  R +VSW+TM+  Y + G   EA++
Sbjct: 252 RSGFDANIPLANALIAMYGKCGSIPMAEALFEGMAVRSLVSWNTMVAIYEQHGDVVEAIK 311

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
               M    +    V ++S++S       ++ GK +H     +  D      I   L+DM
Sbjct: 312 FFHRMLTEKVGFDCVTLVSVLSACGRSGALETGKWVHEFARSHGLDAD--ARIGNVLVDM 369

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG +A A+++F+ L+   VVSW+ MIS Y    +  E ++LF  M  E V P+  T 
Sbjct: 370 YAKCGEIADARKVFDCLHVRGVVSWSAMISAYANHGDSEEALKLFCLMKSEGVRPNSFTF 429

Query: 279 LSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
            ++++ CG  G +  G K  ++ +       +L     +VDM G+   +  A  +  GM 
Sbjct: 430 TAVLVACGHSGLVNEGLKHFNSILSDYQMSPTLEHYACIVDMLGRAGRLVEAYEIIRGMS 489

Query: 338 -SKDVMIWNAVISAYAQAHC-IDKAFEL--FIHMKVSKVRPNEVTMVGLLS-LCTEAGAL 392
              D  +W A +       C +    EL  F+   + +   N+VT   L+S +  EAG L
Sbjct: 490 LCPDKCVWGAFLGG-----CKLHSNLELAEFVAKDLFQSGSNDVTFYVLMSNMYFEAGML 544

Query: 393 E 393
           E
Sbjct: 545 E 545



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 77/147 (52%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  +N++V  Y ++     A+  +  M       D  T+ ++L AC +      GK 
Sbjct: 287 VRSLVSWNTMVAIYEQHGDVVEAIKFFHRMLTEKVGFDCVTLVSVLSACGRSGALETGKW 346

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H FA  +GLD DA + N L+ MY++CG +  AR +FD +  R VVSWS MI  Y   G 
Sbjct: 347 VHEFARSHGLDADARIGNVLVDMYAKCGEIADARKVFDCLHVRGVVSWSAMISAYANHGD 406

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMV 179
            EEAL++   M+   +RP+     +++
Sbjct: 407 SEEALKLFCLMKSEGVRPNSFTFTAVL 433


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  347 bits (891), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 196/597 (32%), Positives = 329/597 (55%), Gaps = 46/597 (7%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFD-EMPN 134
           +I +A A    T    ++H   I  GL      S  LI  Y+      S+  +F    P+
Sbjct: 18  SISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPS 77

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
            +V  W+++IR     GL  EAL +  E + + ++P      S+++  A + D ++ K+I
Sbjct: 78  NNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSI 137

Query: 195 HACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
           H  V+    D   G  + I  ALIDMY +  +L  A+++F  +    VVSW  +ISGY  
Sbjct: 138 HDRVL----DMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNA 193

Query: 253 CNEINEG-------VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
               NE        ++LF EM+ +   P  +TI S++  CG +G L+ GK++H Y++ +G
Sbjct: 194 NGYWNEALEIYYQSIKLFMEMVNQ-FKPDLLTITSILQACGHLGDLEFGKYVHDYMITSG 252

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
           +E     +N L++MY KC  + +++ +F GMK KD + WN++I+ Y Q   +  + ++F 
Sbjct: 253 YECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFE 312

Query: 366 HMK--------------------------VSKVR-----PNEVTMVGLLSLCTEAGALEM 394
           +MK                          +S++R     P+  TM+ +L +C+   A   
Sbjct: 313 NMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQ 372

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           GK +H  I K GLE DV +   L++MY+KCG +  ++++F     +D+  W A+++  GM
Sbjct: 373 GKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGM 432

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           +G G++A+  F +ME +G+ P+ + F+ ++ ACSH+GLV EG + F +M     + P+IE
Sbjct: 433 YGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIE 492

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HY C+VDLL R+ LLD+A + I SMPL+P+  +WGALL+A ++  +  + E  + +I+E+
Sbjct: 493 HYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIEL 552

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            P + GY VL+SNIYA   +W+ V  +R+ +K   +KK+PG S +E+   V+ F  G
Sbjct: 553 NPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTG 609



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 239/487 (49%), Gaps = 44/487 (9%)

Query: 17  HAHIIKTHFKFSYTNIINP---LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT 73
           +AH       FS   + +P   +  +NS++ +   N   S AL++Y+  ++   + D +T
Sbjct: 58  YAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYT 117

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
            P+++ ACA +L   + K IH   +  G   D Y+ NALI MY     L  AR +F+EMP
Sbjct: 118 FPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP 177

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMRE--MRFMDI----RPSEVAMISMVSLFADVAD 187
            RDVVSW+++I GY+  G   EALE+  +    FM++    +P  + + S++     + D
Sbjct: 178 LRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGD 237

Query: 188 VDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           ++ GK +H  ++ +    +     +  LI+MY+KCGNL  ++++F+ +     VSW  MI
Sbjct: 238 LEFGKYVHDYMITS--GYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMI 295

Query: 248 SGYIR-------------------------------CNEINEGVRLFAEMIEENVFPSEI 276
           + YI+                                 + N G+R+ + M  E V P   
Sbjct: 296 NVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMA 355

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T+LS++  C  +   + GK +H  I + G E  + + N L++MY KC  +R++  +F  M
Sbjct: 356 TMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLM 415

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG- 395
           K+KDV+ W A+ISA        KA   F  M+ + + P+ V  V ++  C+ +G +E G 
Sbjct: 416 KTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGL 475

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR-LFSEAIYRDICMWNAMMAGYGM 454
            + H   +   +E  +     +VD+ ++   ++ A   + S  +  D  +W A+++   M
Sbjct: 476 NYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRM 535

Query: 455 HGCGEEA 461
            G  E A
Sbjct: 536 SGDTEIA 542


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 203/594 (34%), Positives = 319/594 (53%), Gaps = 59/594 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+V  Y +N +P  A N++  M    SE +  +                         
Sbjct: 132 WNSIVAGYFQNKRPQEAQNMFDKM----SERNTISW------------------------ 163

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
                      N L+  Y   G +  AR +FD MP R+VVSW+ M+RGY + G+  EA  
Sbjct: 164 -----------NGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAET 212

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M        E  ++S   +   +  +  G+   AC + +   EK  V   T +I  
Sbjct: 213 LFWQM-------PEKNVVSWTVMLGGL--LQEGRIDEACRLFDMMPEK-DVVTRTNMIGG 262

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y + G L  A+ LF+ + + +VVSWT MI+GY++  +++   +LF  M E+N    E++ 
Sbjct: 263 YCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKN----EVSW 318

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEF-SLAMANALVDMYGKCREIRSARTLFDGMK 337
            +++      G    G+   A  L N     S+   NA++  +G+  E+  AR +FD M+
Sbjct: 319 TAML-----KGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMR 373

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KD   W+A+I  Y +      A ELF  M+   +RPN  +++ +LS+C     L+ G+ 
Sbjct: 374 EKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGRE 433

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H  + +   ++DV + + L+ MY KCG++  A ++F     +D+ MWN+++ GY  HG 
Sbjct: 434 IHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGL 493

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G EAL  F DM  SG+ P+ +TF+G+L+ACS+ G V +G  +F+ M     +  KIEHY 
Sbjct: 494 GVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYA 553

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLLGRAG L+EA ++I+ MP+  + I+WGALL A + H    + E+AA ++L +EP+
Sbjct: 554 CMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPK 613

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           N G  +L+SNIYA   RW+DVA +RR M++ RV K PG S + V   VHKF  G
Sbjct: 614 NAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGG 667



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 172/371 (46%), Gaps = 30/371 (8%)

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS-LFADVADVDLGKAIH 195
           ++S +++I  Y R G  E+A  V  EMR  +I    ++  S+V+  F +    +      
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNI----ISWNSIVAGYFQNKRPQEAQNMFD 153

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
               RN             L+  Y   G +  A+++F+R+ + +VVSWT M+ GY++   
Sbjct: 154 KMSERN-------TISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGM 206

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF-EFSLAMAN 314
           I+E   LF +M E+NV       +S  +  G  G LQ G+   A  L +   E  +    
Sbjct: 207 ISEAETLFWQMPEKNV-------VSWTVMLG--GLLQEGRIDEACRLFDMMPEKDVVTRT 257

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
            ++  Y +   +  AR LFD M  ++V+ W  +I+ Y Q   +D A +LF  M       
Sbjct: 258 NMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EK 313

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           NEV+   +L   T  G L+    L   +  +     V+   A++  + + G+V  A ++F
Sbjct: 314 NEVSWTAMLKGYTNCGRLDEASELFNAMPIKS----VVACNAMILCFGQNGEVPKARQVF 369

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
            +   +D   W+AM+  Y   G   +AL  F  M+R G++PN  + I +L+ C+    + 
Sbjct: 370 DQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLD 429

Query: 495 EGKSVFDKMVH 505
            G+ +  ++V 
Sbjct: 430 HGREIHAQLVR 440



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 100/266 (37%), Gaps = 57/266 (21%)

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           N+L+  Y +  +I  AR +FD M+ K+++ WN++++ Y Q     +A  +F  M      
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMS----- 156

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
                                             E + I    LV  Y   G +N A  +
Sbjct: 157 ----------------------------------ERNTISWNGLVSGYINNGMINEAREV 182

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F     R++  W AM+ GY   G   EA   F  M    V    +   GLL      G +
Sbjct: 183 FDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLL----QEGRI 238

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYG--CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
            E   +FD M     +V +    G  C V      G L EA  +   MP R N++ W  +
Sbjct: 239 DEACRLFDMMPEK-DVVTRTNMIGGYCQV------GRLVEARMLFDEMP-RRNVVSWTTM 290

Query: 552 LAASKLHKNPSMGEIAATQILEIEPQ 577
           +     ++   +    A ++ E+ P+
Sbjct: 291 ITGYVQNQQVDI----ARKLFEVMPE 312



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 72/144 (50%), Gaps = 10/144 (6%)

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
           +I + +L+  Y++ G +  A  +F E   ++I  WN+++AGY  +   +EA   F  M  
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMS- 156

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
              + N I++ GL++   + G++ E + VFD+M         +  +  MV    + G++ 
Sbjct: 157 ---ERNTISWNGLVSGYINNGMINEAREVFDRMPE-----RNVVSWTAMVRGYVKEGMIS 208

Query: 531 EAHEMIKSMPLRPNMIVWGALLAA 554
           EA  +   MP + N++ W  +L  
Sbjct: 209 EAETLFWQMPEK-NVVSWTVMLGG 231



 Score = 39.3 bits (90), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 36/170 (21%)

Query: 6   GFLNLEQTRQCHAHIIKTHFKFS----------YTNI--------------INPLTRYNS 41
           G  NL+  R+ HA ++++ F             Y                 +  +  +NS
Sbjct: 424 GLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNS 483

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           ++T Y ++     AL ++  M  +G   D+ T   +L AC     ++ G    G  I N 
Sbjct: 484 IITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSAC-----SYTGNVKKGLEIFNS 538

Query: 102 LDGDAYVSN------ALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMI 144
           ++    V         ++ +    G L  A  L ++MP   D + W  ++
Sbjct: 539 METKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588


>gi|317106770|dbj|BAJ53262.1| JMS10C05.5 [Jatropha curcas]
          Length = 638

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 199/611 (32%), Positives = 330/611 (54%), Gaps = 25/611 (4%)

Query: 34  NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           N +T + SL+  Y+ +N+  SALNI + M K+G  ++  T   IL+AC+       G++ 
Sbjct: 5   NTIT-WTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFGQQF 63

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           H F IK G D +  V  +LI MY+       A  +FD M  +DV  ++ MI  Y R G  
Sbjct: 64  HCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARAGNG 123

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA--- 210
           E+A+ V   M    ++P++    +++S      D DLG            ++ LG++   
Sbjct: 124 EKAIRVFINMLNAGLQPNDYTFTNIIS----ACDGDLGIEE--------GEQFLGLSFKY 171

Query: 211 -------IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
                  I  A+I+MY K G    A+++F+ +   +++SWT +ISGY R  +  + V  F
Sbjct: 172 GFLNETSIGNAIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTF 231

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
            E+    V      + +++  C     L+LG  +H  +++ G+  ++ +  ALVD+Y KC
Sbjct: 232 MELHLCGVNFDSSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKC 291

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQ--AHCIDKAFELFIHMKVSKVRPNEVTMVG 381
             + SAR +FDG+ SK +  +NA+++ + +      +    LF H ++  ++P+ VT   
Sbjct: 292 GNLMSARMVFDGLSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSR 351

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           LLSL      L  G+  H Y  K G E D+ +  A++ MYAKCG +  A+R+F+     D
Sbjct: 352 LLSLSANHSTLGRGRCYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMNDHD 411

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
              WNAM++ Y +HG G + L+ F +M +    P+ IT + +L AC+++GL  +G S+F+
Sbjct: 412 SISWNAMISAYALHGQGAKVLLLFEEMIKKEFAPDEITILSILQACTYSGLFRDGISLFN 471

Query: 502 KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
            M    G+ P +EHY CMVDLLGRAG L EA ++I   P   + ++W  L+   KL  + 
Sbjct: 472 VMEPKYGIKPLLEHYACMVDLLGRAGHLSEAMDIINKSPFSKSTLLWRTLVNVCKLCGDR 531

Query: 562 SMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
           + G++A+  +LE+ P   G  +L+SN+YA     ++ A VR VM ++++ KE G S +E+
Sbjct: 532 NFGKLASKYLLELSPVEAGSYILVSNMYAGERMLDEAAKVRTVMNDLKLSKEAGTSWIEI 591

Query: 622 NGLVHKFIRGG 632
           +  VH F+  G
Sbjct: 592 DDKVHHFVASG 602



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 204/426 (47%), Gaps = 6/426 (1%)

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           R+ ++W+++I+GY      E AL +  EM       +E     ++   +       G+  
Sbjct: 4   RNTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFGQQF 63

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
           H  V++   DE   V + T+LI MY++      A+++F+ +    V  +  MI  Y R  
Sbjct: 64  HCFVIKCGFDEN--VVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARAG 121

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
              + +R+F  M+   + P++ T  ++I  C    G++ G+       + GF    ++ N
Sbjct: 122 NGEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQFLGLSFKYGFLNETSIGN 181

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
           A+++MYGK    R A  +F  M  ++++ W A+IS Y ++    KA + F+ + +  V  
Sbjct: 182 AIINMYGKKGMAREAERMFSAMTDRNLISWTALISGYTRSGDGKKAVDTFMELHLCGVNF 241

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           +   +  +L  C+E   LE+G  +H  + K G    V + TALVD+YAKCG++  A  +F
Sbjct: 242 DSSLLTTILDGCSECRNLELGLQIHGLVIKLGYACAVNIGTALVDLYAKCGNLMSARMVF 301

Query: 435 SEAIYRDICMWNAMMAGY--GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL 492
                + I  +NA++AG+        E+ ++ F      G+KP+ +TF  LL+  ++   
Sbjct: 302 DGLSSKRIASFNAILAGFMENSRDGEEDPIVLFNHFRLDGIKPDMVTFSRLLSLSANHST 361

Query: 493 VTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           +  G+  +       G    +     ++ +  + G ++EAH M   M    + I W A++
Sbjct: 362 LGRGR-CYHAYAIKTGFEADLSVANAVITMYAKCGSIEEAHRMFNVMN-DHDSISWNAMI 419

Query: 553 AASKLH 558
           +A  LH
Sbjct: 420 SAYALH 425



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 2/219 (0%)

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M  ++ + W ++I  Y   +  + A  +   M  S    NE T   +L  C+       G
Sbjct: 1   MLVRNTITWTSLIKGYLDDNEFESALNIASEMHKSGEALNEHTCSVILQACSSPDYRIFG 60

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           +  H ++ K G + +V++ T+L+ MY +      A ++F     +D+  +N M+  Y   
Sbjct: 61  QQFHCFVIKCGFDENVVVGTSLIAMYTRSKLFGDAEKVFDSMACKDVRCFNFMILEYARA 120

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G GE+A+  F++M  +G++PN  TF  +++AC     + EG+  F  +    G + +   
Sbjct: 121 GNGEKAIRVFINMLNAGLQPNDYTFTNIISACDGDLGIEEGEQ-FLGLSFKYGFLNETSI 179

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
              ++++ G+ G+  EA  M  +M  R N+I W AL++ 
Sbjct: 180 GNAIINMYGKKGMAREAERMFSAMTDR-NLISWTALISG 217


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 203/594 (34%), Positives = 319/594 (53%), Gaps = 59/594 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+V  Y +N +P  A N++  M    SE +  +                         
Sbjct: 132 WNSIVAGYFQNKRPQEAQNMFDKM----SERNTISW------------------------ 163

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
                      N L+  Y   G +  AR +FD MP R+VVSW+ M+RGY + G+  EA  
Sbjct: 164 -----------NGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGMISEAET 212

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M        E  ++S   +   +  +  G+   AC + +   EK  V   T +I  
Sbjct: 213 LFWQM-------PEKNVVSWTVMLGGL--LQEGRIDEACRLFDMMPEK-DVVTRTNMIGG 262

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y + G L  A+ LF+ + + +VVSWT MI+GY++  +++   +LF  M E+N    E++ 
Sbjct: 263 YCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKN----EVSW 318

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEF-SLAMANALVDMYGKCREIRSARTLFDGMK 337
            +++      G    G+   A  L N     S+   NA++  +G+  E+  AR +FD M+
Sbjct: 319 TAML-----KGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMR 373

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KD   W+A+I  Y +      A ELF  M+   +RPN  +++ +LS+C     L+ G+ 
Sbjct: 374 EKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGRE 433

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H  + +   ++DV + + L+ MY KCG++  A ++F     +D+ MWN+++ GY  HG 
Sbjct: 434 IHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGL 493

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G EAL  F DM  SG+ P+ +TF+G+L+ACS+ G V +G  +F+ M     +  KIEHY 
Sbjct: 494 GVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYA 553

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLLGRAG L+EA ++I+ MP+  + I+WGALL A + H    + E+AA ++L +EP+
Sbjct: 554 CMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPK 613

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           N G  +L+SNIYA   RW+DVA +RR M++ RV K PG S + V   VHKF  G
Sbjct: 614 NAGPFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIVVEKKVHKFTGG 667



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 172/371 (46%), Gaps = 30/371 (8%)

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS-LFADVADVDLGKAIH 195
           ++S +++I  Y R G  E+A  V  EMR  +I    ++  S+V+  F +    +      
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNI----ISWNSIVAGYFQNKRPQEAQNMFD 153

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
               RN             L+  Y   G +  A+++F+R+ + +VVSWT M+ GY++   
Sbjct: 154 KMSERN-------TISWNGLVSGYINNGMINEAREVFDRMPERNVVSWTAMVRGYVKEGM 206

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF-EFSLAMAN 314
           I+E   LF +M E+NV       +S  +  G  G LQ G+   A  L +   E  +    
Sbjct: 207 ISEAETLFWQMPEKNV-------VSWTVMLG--GLLQEGRIDEACRLFDMMPEKDVVTRT 257

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
            ++  Y +   +  AR LFD M  ++V+ W  +I+ Y Q   +D A +LF  M       
Sbjct: 258 NMIGGYCQVGRLVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMP----EK 313

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           NEV+   +L   T  G L+    L   +  +     V+   A++  + + G+V  A ++F
Sbjct: 314 NEVSWTAMLKGYTNCGRLDEASELFNAMPIKS----VVACNAMILCFGQNGEVPKARQVF 369

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
            +   +D   W+AM+  Y   G   +AL  F  M+R G++PN  + I +L+ C+    + 
Sbjct: 370 DQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLD 429

Query: 495 EGKSVFDKMVH 505
            G+ +  ++V 
Sbjct: 430 HGREIHAQLVR 440



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 100/266 (37%), Gaps = 57/266 (21%)

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           N+L+  Y +  +I  AR +FD M+ K+++ WN++++ Y Q     +A  +F  M      
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMS----- 156

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
                                             E + I    LV  Y   G +N A  +
Sbjct: 157 ----------------------------------ERNTISWNGLVSGYINNGMINEAREV 182

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F     R++  W AM+ GY   G   EA   F  M    V    +   GLL      G +
Sbjct: 183 FDRMPERNVVSWTAMVRGYVKEGMISEAETLFWQMPEKNVVSWTVMLGGLL----QEGRI 238

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYG--CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
            E   +FD M     +V +    G  C V      G L EA  +   MP R N++ W  +
Sbjct: 239 DEACRLFDMMPEK-DVVTRTNMIGGYCQV------GRLVEARMLFDEMP-RRNVVSWTTM 290

Query: 552 LAASKLHKNPSMGEIAATQILEIEPQ 577
           +     ++   +    A ++ E+ P+
Sbjct: 291 ITGYVQNQQVDI----ARKLFEVMPE 312



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 72/144 (50%), Gaps = 10/144 (6%)

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
           +I + +L+  Y++ G +  A  +F E   ++I  WN+++AGY  +   +EA   F  M  
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMS- 156

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
              + N I++ GL++   + G++ E + VFD+M         +  +  MV    + G++ 
Sbjct: 157 ---ERNTISWNGLVSGYINNGMINEAREVFDRMPE-----RNVVSWTAMVRGYVKEGMIS 208

Query: 531 EAHEMIKSMPLRPNMIVWGALLAA 554
           EA  +   MP + N++ W  +L  
Sbjct: 209 EAETLFWQMPEK-NVVSWTVMLGG 231



 Score = 39.3 bits (90), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 36/170 (21%)

Query: 6   GFLNLEQTRQCHAHIIKTHFKFS----------YTNI--------------INPLTRYNS 41
           G  NL+  R+ HA ++++ F             Y                 +  +  +NS
Sbjct: 424 GLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNS 483

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           ++T Y ++     AL ++  M  +G   D+ T   +L AC     ++ G    G  I N 
Sbjct: 484 IITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSAC-----SYTGNVKKGLEIFNS 538

Query: 102 LDGDAYVSN------ALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMI 144
           ++    V         ++ +    G L  A  L ++MP   D + W  ++
Sbjct: 539 METKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588


>gi|297745783|emb|CBI15839.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 162/372 (43%), Positives = 244/372 (65%), Gaps = 2/372 (0%)

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
            ++ M+  +V PS+ +   ++  C   G  QLG+  H  I++ GFE+ + +   L+D Y 
Sbjct: 17  FYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYA 76

Query: 322 KCREIRSARTLFDGM--KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
           K   +  AR LFD M  ++ + + WN +ISAY Q      A  +F  M+   V+P EVTM
Sbjct: 77  KHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTM 136

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
           V LLS C   GAL+MG+W+H YI  + L++DV+L  AL+DMY KCG +  A  +F     
Sbjct: 137 VSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSR 196

Query: 440 RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           ++I  WN+++ G GM+G GEEA+  F+ ME+ G+KP+G+TF+G+L+ CSH+GL++ G+  
Sbjct: 197 KNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRY 256

Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK 559
           F +M+   GL P +EHYGCMVDLLGRAG L EA E+I++MP++PN +V G+LL A ++HK
Sbjct: 257 FSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHK 316

Query: 560 NPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           +  +GE    Q+LE++P + G  V +SN+YA  +RW+DV   R++M +  V K PG SS+
Sbjct: 317 DTKLGEQVTQQLLELDPCDGGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSI 376

Query: 620 EVNGLVHKFIRG 631
           EVN +VH+F+ G
Sbjct: 377 EVNNIVHEFVAG 388



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/323 (30%), Positives = 164/323 (50%), Gaps = 19/323 (5%)

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           MIR     G+  + L     M   D+ PS+ +   ++   A   +  LG+A H      C
Sbjct: 1   MIRVSLESGVCPDFLGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFH------C 54

Query: 203 KDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRL---NQNSVVSWTVMISGYIRCNE 255
           +  K+G    + + T L+D Y+K G +  A+ LF+ +   N NSV +W  MIS Y++C E
Sbjct: 55  QIMKMGFEYDMILQTGLLDFYAKHGYVEEARNLFDNMTERNSNSV-TWNTMISAYVQCGE 113

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
               + +F +M  ENV P+E+T++SL+  C  +G L +G+W+H YI     +  + + NA
Sbjct: 114 FGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIRTKRLKIDVVLGNA 173

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
           L+DMY KC  + +A  +F G+  K++  WN++I         ++A   FI M+   ++P+
Sbjct: 174 LIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPD 233

Query: 376 EVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
            VT VG+LS C+ +G L  G ++    +   GLE  V     +VD+  + G +  A  L 
Sbjct: 234 GVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELI 293

Query: 435 SEAIYRDICMWNAMMAGYGMHGC 457
                +     N+M+ G  +  C
Sbjct: 294 RAMPMKP----NSMVLGSLLRAC 312



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 149/299 (49%), Gaps = 6/299 (2%)

Query: 56  LNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQM 115
           L  Y+ M +N       +   IL++CA      LG+  H   +K G + D  +   L+  
Sbjct: 15  LGFYSGMLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDF 74

Query: 116 YSECGSLVSARYLFDEMPNRDV--VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEV 173
           Y++ G +  AR LFD M  R+   V+W+TMI  Y + G    A+ + ++M+  +++P+EV
Sbjct: 75  YAKHGYVEEARNLFDNMTERNSNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEV 134

Query: 174 AMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFN 233
            M+S++S  A +  +D+G+ IH  +    K  K+ V +  ALIDMY KCG L  A  +F+
Sbjct: 135 TMVSLLSACAHLGALDMGEWIHGYI--RTKRLKIDVVLGNALIDMYCKCGALEAAIDVFH 192

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL 293
            L++ ++  W  +I G        E +  F  M +E + P  +T + ++  C   G L  
Sbjct: 193 GLSRKNIFCWNSIIVGLGMNGRGEEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSA 252

Query: 294 GKWLHAYILR-NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISA 350
           G+   + +L   G E  +     +VD+ G+   ++ A  L   M  K + M+  +++ A
Sbjct: 253 GQRYFSEMLGVYGLEPGVEHYGCMVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRA 311



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 78/142 (54%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++++Y++  +  +A++++  M+    +    T+ ++L ACA +    +G+ IHG+  
Sbjct: 101 WNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIR 160

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
              L  D  + NALI MY +CG+L +A  +F  +  +++  W+++I G    G  EEA+ 
Sbjct: 161 TKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIA 220

Query: 159 VMREMRFMDIRPSEVAMISMVS 180
               M    I+P  V  + ++S
Sbjct: 221 AFIVMEKEGIKPDGVTFVGILS 242


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 205/653 (31%), Positives = 331/653 (50%), Gaps = 82/653 (12%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTNIINPLT-RYNSLVTSYIKNNKPSSALNIYAFMRKNGS 67
           N  Q ++ H  II+T        + NP T  YN+L+ +Y K     +A N++        
Sbjct: 20  NRAQVKKLHCRIIRT--------LTNPETFLYNNLINTYGKLGDLKNARNVF-------- 63

Query: 68  EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY 127
             D+   P +                             +  N L+  YS+ G L   + 
Sbjct: 64  --DHIPQPNL-----------------------------FSWNTLLSAYSKLGYLQDMQR 92

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVA 186
           +FD MPN DVVSW++++ GY   GL  E++ V   M +   +  + +   +M+ L ++  
Sbjct: 93  VFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLILSSNRG 152

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
            VDLG+ IH  + +      L V   + L+DMY+K G +  A ++F  + + ++V +  M
Sbjct: 153 FVDLGRQIHGQIFKFGYQSYLFVG--SPLVDMYAKTGFINDANRIFEEIPEKNIVVYNTM 210

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFP-------------------------------SE 275
           I+G +RC  I E  +LF  M E++                                   +
Sbjct: 211 ITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLFKEAVDKFKEMGIEGFCMDQ 270

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T  S++  CG    L  GK +HAYI+R  ++ ++ + +AL+DMY KCR ++ A  +F  
Sbjct: 271 FTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRK 330

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M+ K+V+ W A++  Y Q    ++A  +F  M+ +++ P++ T+  ++S C    +LE G
Sbjct: 331 MRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEG 390

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
              H      GL   V +  AL+ +Y KCG +  A++LF E   RD   W A+++GY   
Sbjct: 391 AQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQF 450

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G   E +  F  M   G+ P+G+TF+G+L+ACS AGLV +G   F+ MV    + P  +H
Sbjct: 451 GKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDH 510

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y CM+DLL RAG L+EA   I  MP  P+ I W  LL++ +L+ N  +G+ AA  + ++E
Sbjct: 511 YTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLE 570

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           PQN    +L+S+IYA   +W+DVA +R+ M+E+ VKKEPG S ++    VH F
Sbjct: 571 PQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIF 623



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 148/331 (44%), Gaps = 44/331 (13%)

Query: 6   GFLNLEQTRQCHAHIIKTHF----------------------------KFSYTNIINPLT 37
           GFL L++ +Q HA+II+T +                            K  + N+I+   
Sbjct: 282 GFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRKMRHKNVIS--- 338

Query: 38  RYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
            + +++  Y +N     A+ I+  M++N    D+FT+ +++ +CA +     G + HG A
Sbjct: 339 -WTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQA 397

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           + +GL     VSNALI +Y +CGSL  A  LF EM  RD VSW+ ++ GY + G   E +
Sbjct: 398 LASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETI 457

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            +   M    I P  V  + ++S  +    V+ G     C+V+  +   +     T +ID
Sbjct: 458 SLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHY-TCMID 516

Query: 218 MYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIE--ENVFPS 274
           + S+ G L  AK   N++      + W  ++S   R N   E  +  AE +   E   P+
Sbjct: 517 LLSRAGRLEEAKNFINQMPFSPDAIGWATLLSS-CRLNGNLEIGKWAAESLHKLEPQNPA 575

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNG 305
              +LS I           GKW     LR G
Sbjct: 576 SYILLSSIYAAK-------GKWDDVAKLRKG 599



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 45/239 (18%)

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA------------ 430
           L  C EA      K LH  I +     +  L   L++ Y K GD+  A            
Sbjct: 12  LKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQPNL 71

Query: 431 -------------------YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
                               R+F      D+  WN++++GY  +G   E++  +  M + 
Sbjct: 72  FSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKD 131

Query: 472 G-VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
           G V  N ITF  +L   S+ G V  G+ +  + +   G    +     +VD+  + G ++
Sbjct: 132 GSVNLNRITFSTMLILSSNRGFVDLGRQIHGQ-IFKFGYQSYLFVGSPLVDMYAKTGFIN 190

Query: 531 EAHEMIKSMPLRPNMIVWGALLA----------ASKLHKN-PSMGEIAATQILEIEPQN 578
           +A+ + + +P + N++V+  ++           A +L  N P    I+ T I+    QN
Sbjct: 191 DANRIFEEIPEK-NIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQN 248


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 210/603 (34%), Positives = 338/603 (56%), Gaps = 16/603 (2%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH----LGKEIHG 95
           N L+   ++ +    A+ I+   R N  +V+  T   +L A A+  ++     +G+ +HG
Sbjct: 345 NGLIVGLVRQDFSEEAVKIFVGTR-NTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHG 403

Query: 96  FAIKNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
             ++ GL D    VSN L+ MY++CG++ SA  +F  M   D +SW+T+I    + G  E
Sbjct: 404 HMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCE 463

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           EA+     MR   I PS  A+IS +S  A +  +  G+ +H   V+   D  L  +++  
Sbjct: 464 EAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLD--LDTSVSNV 521

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE--INEGVRLFAEMIEENVF 272
           L+ MY +CG ++   ++FN + ++  VSW  M+ G +  ++  I+E V++F  M+   + 
Sbjct: 522 LVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMM-GVMASSQTPISEIVKVFNNMMRGGLI 580

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P+++T ++L+     +  L+LGK +HA ++++G      + NAL+  Y K  ++ S   L
Sbjct: 581 PNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHL 640

Query: 333 FDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           F  M  + D + WN++IS Y     + +A +    M  S    +  T   +L+ C    A
Sbjct: 641 FTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAA 700

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           LE G  LH +  +  LE DV++++ALVDMY+KCG V+ A +LF+    R+   WN+M++G
Sbjct: 701 LERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISG 760

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           Y  HG G +A+  F +M RS   P+ +TF+ +L+ACSHAGLV  G   F+ M+   G++P
Sbjct: 761 YARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFE-MMPDHGILP 819

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS---MGEIAA 568
           +IEHY C++DLLGRAG +D+  E I+ MP+ PN ++W  +L A +  K+ S   +G  A+
Sbjct: 820 QIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREAS 879

Query: 569 TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
             +LEIEPQN    VL SN +A    W D A  R  M++   KKE G S V +N  VH F
Sbjct: 880 RVLLEIEPQNPVNYVLASNFHAATGMWEDTAKARTAMRQATEKKEAGRSWVTLNDGVHTF 939

Query: 629 IRG 631
           I G
Sbjct: 940 IAG 942



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 206/392 (52%), Gaps = 4/392 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++++  +N     A+  Y+ MR++     NF + + L +CA + +   G+++H  A+
Sbjct: 449 WNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAV 508

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP-EEAL 157
           K GLD D  VSN L++MY ECG++     +F+ M   D VSW+TM+        P  E +
Sbjct: 509 KWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIV 568

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           +V   M    + P++V  I++++  + ++ ++LGK +HA V+++   E     +  ALI 
Sbjct: 569 KVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMED--NVVDNALIS 626

Query: 218 MYSKCGNLAYAKQLF-NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
            Y+K G++   + LF N  ++   +SW  MISGYI    + E +     MI         
Sbjct: 627 CYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCC 686

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T   ++  C  V  L+ G  LHA+ +R+  E  + + +ALVDMY KC  +  A  LF+ M
Sbjct: 687 TFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSM 746

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             ++   WN++IS YA+     KA E+F  M  S+  P+ VT V +LS C+ AG +E G 
Sbjct: 747 TQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAGLVERGL 806

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
                +   G+   +   + ++D+  + G ++
Sbjct: 807 EYFEMMPDHGILPQIEHYSCVIDLLGRAGKID 838



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/542 (24%), Positives = 262/542 (48%), Gaps = 25/542 (4%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPT-------ILKACAQVL 85
           I  L  +N+L++ Y K    +S   ++  M++  S +     PT       I  A     
Sbjct: 232 IRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQ--LRPTEHTFGSLITAASLSSG 289

Query: 86  MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIR 145
            + +  ++  + +K+G   D YV +AL+  ++  G    A+ +F  +  ++ V+ + +I 
Sbjct: 290 SSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKNAVTLNGLIV 349

Query: 146 GYHRGGLPEEALEVMREMR-FMDIRPSE-VAMISMVSLFADVAD-VDLGKAIHACVVRNC 202
           G  R    EEA+++    R  +D+     V ++S ++ ++   + + +G+ +H  ++R  
Sbjct: 350 GLVRQDFSEEAVKIFVGTRNTVDVNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTG 409

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
             + L +A++  L++MY+KCG +  A ++F  +     +SW  +IS   +     E V  
Sbjct: 410 LTD-LKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMH 468

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           ++ M +  + PS   ++S +  C  +  L  G+ +H   ++ G +   +++N LV MYG+
Sbjct: 469 YSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGE 528

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC-IDKAFELFIHMKVSKVRPNEVTMVG 381
           C  +     +F+ M   D + WN ++   A +   I +  ++F +M    + PN+VT + 
Sbjct: 529 CGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFIN 588

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYR 440
           LL+  +    LE+GK +H  + K G+  D ++  AL+  YAK GD+     LF+  +  R
Sbjct: 589 LLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRR 648

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           D   WN+M++GY  +G  +EA+     M  SG   +  TF  +LNAC+    +  G    
Sbjct: 649 DAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGME-- 706

Query: 501 DKMVHGLGLVPKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
              +H  G+   +E        +VD+  + G +D A ++  SM  R N   W ++++   
Sbjct: 707 ---LHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQR-NEFSWNSMISGYA 762

Query: 557 LH 558
            H
Sbjct: 763 RH 764



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 230/488 (47%), Gaps = 22/488 (4%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           + +H   IK GL+ D ++ N L+  Y++   L +A  +FDEMP R+ VSW+ ++ GY   
Sbjct: 81  ENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVSGYVLH 140

Query: 151 GLPEEALEVMREMRF---MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
           G+ EEA  V R M        RP+     +++    D     LG A+    + +  +   
Sbjct: 141 GIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYAS 200

Query: 208 GVAIATALIDMYSKC--GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
              +  ALI MY  C  G    A+++F+      +++W  ++S Y +  ++     LF +
Sbjct: 201 NTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKD 260

Query: 266 MIEEN----VFPSEITILSLIIECGFVGGLQ--LGKWLHAYILRNGFEFSLAMANALVDM 319
           M   +    + P+E T  SLI       G    L + L  ++L++G    L + +ALV  
Sbjct: 261 MQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVL-VWVLKSGCSSDLYVGSALVSA 319

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
           + +      A+ +F  +K K+ +  N +I    +    ++A ++F+  + + V  N  T 
Sbjct: 320 FARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTR-NTVDVNADTY 378

Query: 380 VGLLSLCTEAG----ALEMGKWLHTYIEKQGL-EVDVILKTALVDMYAKCGDVNGAYRLF 434
           V LLS   E       L +G+ +H ++ + GL ++ + +   LV+MYAKCG +  A ++F
Sbjct: 379 VVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIF 438

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
                 D   WN +++    +G  EEA++ +  M +S + P+    I  L++C+   L+T
Sbjct: 439 QLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLT 498

Query: 495 EGKSVF-DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            G+ V  D +  GL L   + +   +V + G  G + +  ++  SM    + + W  ++ 
Sbjct: 499 AGQQVHCDAVKWGLDLDTSVSNV--LVKMYGECGAMSDYWKVFNSMA-EHDEVSWNTMMG 555

Query: 554 ASKLHKNP 561
                + P
Sbjct: 556 VMASSQTP 563



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 12/225 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++ YI N     A++    M  +G  +D  T   IL ACA V     G E+H F I
Sbjct: 653 WNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGI 712

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++ L+ D  V +AL+ MYS+CG +  A  LF+ M  R+  SW++MI GY R GL  +A+E
Sbjct: 713 RSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIE 772

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA--TALI 216
           +  EM      P  V  +S++S  +    V+ G      +     D  +   I   + +I
Sbjct: 773 IFEEMLRSRESPDHVTFVSVLSACSHAGLVERGLEYFEMM----PDHGILPQIEHYSCVI 828

Query: 217 DMYSKCGNLAYAKQLFNRL--NQNSVVSWTVMISGYIRCNEINEG 259
           D+  + G +   K+   R+    N+++  TV+++    C +  +G
Sbjct: 829 DLLGRAGKIDKIKEYIQRMPIEPNALIWRTVLVA----CRQSKDG 869



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 83/183 (45%), Gaps = 17/183 (9%)

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           LL L    G     + LH  + K+GL  D+ L   LV+ YAK   +  A ++F E   R+
Sbjct: 67  LLPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERN 126

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMER---SGVKPNGITFIGLLNACSHAGLVTEGKS 498
              W  +++GY +HG  EEA   F  M R   +G +P   TF  LL AC   G    G  
Sbjct: 127 AVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLG-- 184

Query: 499 VFDKMVHGLGLVPKIEHYG------CMVDLLGRA--GLLDEAHEMIKSMPLRPNMIVWGA 550
            F   VH  GLV K E+         ++ + G    G    A  +    P+R ++I W A
Sbjct: 185 -FAVQVH--GLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIR-DLITWNA 240

Query: 551 LLA 553
           L++
Sbjct: 241 LMS 243


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1038

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 190/592 (32%), Positives = 320/592 (54%), Gaps = 5/592 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+V +Y +N     +  I+  MR+   EV++ T+ T+L     V     G+ IHG  +
Sbjct: 330 WNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVV 389

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G D    V N L++MY+  G    A  +F +MP +D++SW++++  +   G   +AL 
Sbjct: 390 KMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 449

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIATALID 217
           ++  M       + V   S ++        D G+ +H   VV    D ++   I  AL+ 
Sbjct: 450 ILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQI---IGNALVS 506

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY K G ++ ++++  ++ +  VV+W  +I GY    + ++ +  F  +  E V  + IT
Sbjct: 507 MYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYIT 566

Query: 278 ILSLIIECGFVGGL-QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           ++S++  C   G L + GK LHAYI+  GFE    + N+L+ MY KC ++ S++ LF+G+
Sbjct: 567 VVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGL 626

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
            ++ ++ WNA+++A A     ++  +L   M+   +  ++ +    LS   +   LE G+
Sbjct: 627 DNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQ 686

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            LH    K G E+D  +  A  DMY+KCG++    ++   ++ R +  WN +++  G HG
Sbjct: 687 QLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHG 746

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             EE    F +M   G+KP  +TF+ LL ACSH GLV +G + +D +    GL P IEH 
Sbjct: 747 YFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHC 806

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            C++DLLGR+G L EA   I  MP++PN +VW +LLA+ K+H++   G  AA  + ++EP
Sbjct: 807 ICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEP 866

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           ++    VL SN++A   RW DV  VR+ M    +KK+   S V++   V  F
Sbjct: 867 EDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSF 918



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 258/527 (48%), Gaps = 17/527 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + SL+  Y    +P   ++IY  MR  G E +  ++  ++ +C  +    LG++I G  I
Sbjct: 229 WTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVI 288

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+GL+    V N+LI M+   G++  A Y+F+++  RD +SW++++  Y + G  EE+  
Sbjct: 289 KSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSR 348

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   MR      +   + +++S+  DV     G+ IH  VV+   D    V +   L+ M
Sbjct: 349 IFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSV--VCVCNTLLRM 406

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+  G    A  +F ++    ++SW  +++ ++      + + +   MI      + +T 
Sbjct: 407 YAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTF 466

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +  C        G+ LH  ++ +G   +  + NALV MYGK   + ++R +   M  
Sbjct: 467 TSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPR 526

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA-LEMGKW 397
           +DV+ WNA+I  YA+    DKA   F  ++V  V  N +T+V +LS C   G  LE GK 
Sbjct: 527 RDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKP 586

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH YI   G E D  +K +L+ MYAKCGD++ +  LF+    R I  WNA++A    HG 
Sbjct: 587 LHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGH 646

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH-- 515
           GEE L     M   G+  +  +F   L+A +   ++ EG+      +HGL +    E   
Sbjct: 647 GEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQ-----LHGLAVKLGFELDC 701

Query: 516 --YGCMVDLLGRAGLLDEAHEMIKSMPLRPN--MIVWGALLAASKLH 558
             +    D+  + G   E  E++K +P   N  +  W  L++A   H
Sbjct: 702 FIFNAAADMYSKCG---EIGEVVKMLPPSVNRSLPSWNILISALGRH 745



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 259/514 (50%), Gaps = 14/514 (2%)

Query: 82  AQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWS 141
           +Q+     G+ +H   +K  +      +N LI MY++ G +  ARYLFD+MP R+ VSW+
Sbjct: 69  SQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWN 128

Query: 142 TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV-DLGKAIHACVVR 200
           TM+ G  R GL  E +E  ++M  + I+PS   + S+V+       +   G  +H  V +
Sbjct: 129 TMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAK 188

Query: 201 NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
           +       V ++TA++ +Y   G ++ ++++F  +   +VVSWT ++ GY    E  E +
Sbjct: 189 SGLLSD--VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 246

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
            ++  M  E V  +E ++  +I  CG +    LG+ +   ++++G E  LA+ N+L+ M+
Sbjct: 247 DIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMF 306

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
           G    +  A  +F+ +  +D + WN++++AYAQ   I+++  +F  M+      N  T+ 
Sbjct: 307 GNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVS 366

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
            LLS+  +    + G+ +H  + K G +  V +   L+ MYA  G    A  +F +   +
Sbjct: 367 TLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTK 426

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           D+  WN++MA +   G   +AL     M R+G   N +TF   L AC       +G    
Sbjct: 427 DLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKG---- 482

Query: 501 DKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
            +++HGL    GL         +V + G+ G +  +  ++  MP R +++ W AL+    
Sbjct: 483 -RILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMP-RRDVVAWNALIGGYA 540

Query: 557 LHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYA 590
            +++P    +AA Q L +E  +  Y  ++S + A
Sbjct: 541 ENEDPDKA-LAAFQTLRVEGVSANYITVVSVLSA 573



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 210/425 (49%), Gaps = 9/425 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NSL+ S++ + +   AL I   M + G  V+  T  + L AC        G+ +HG
Sbjct: 428 LISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHG 487

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             + +GL  +  + NAL+ MY + G + ++R +  +MP RDVV+W+ +I GY     P++
Sbjct: 488 LVVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDK 547

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVAD-VDLGKAIHACVVRNC--KDEKLGVAIA 212
           AL   + +R   +  + + ++S++S      D ++ GK +HA +V      DE     + 
Sbjct: 548 ALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEH----VK 603

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            +LI MY+KCG+L+ ++ LFN L+  S+++W  +++         E ++L ++M    + 
Sbjct: 604 NSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLS 663

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
             + +    +     +  L+ G+ LH   ++ GFE    + NA  DMY KC EI     +
Sbjct: 664 LDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKM 723

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
                ++ +  WN +ISA  +    ++  E F  M    ++P  VT V LL+ C+  G +
Sbjct: 724 LPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLV 783

Query: 393 EMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMA 450
           + G   +  I K  GLE  +     ++D+  + G +  A    S+   + +  +W +++A
Sbjct: 784 DQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLA 843

Query: 451 GYGMH 455
              +H
Sbjct: 844 SCKIH 848


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 198/537 (36%), Positives = 296/537 (55%), Gaps = 31/537 (5%)

Query: 121 SLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
           +L +AR LFD+MP RDVVSW+ M+ GY + G  +EA E+  EM   +       + + V 
Sbjct: 45  NLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQ 104

Query: 181 ---------LFADVADVDL-------------GKAIHACVVRNCKDEKLGVAIATALIDM 218
                    LF   AD +L              + + A  + +   E+  V+  T +I  
Sbjct: 105 NGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNT-MISG 163

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y++ G L  A++LF       V +WT M+SGY++   ++E  R+F  M E+N   S   I
Sbjct: 164 YAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSV-SWNAI 222

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           ++  ++C  +   Q  +   A   +N     ++  N ++  Y +  +I  AR  FD M  
Sbjct: 223 IAGYVQCKRMD--QARELFEAMPCQN-----VSSWNTMITGYAQNGDIAQARNFFDRMPQ 275

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +D + W A+I+ YAQ+   ++A  LF+ MK    R N  T    LS C E  ALE+GK +
Sbjct: 276 RDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQV 335

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + K GLE    +  AL+ MY KCG+++ AY +F     +++  WN M+AGY  HG G
Sbjct: 336 HGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFG 395

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +EAL+ F  M+++G+ P+ +T +G+L+ACSH GLV +G   F  M    G+    +HY C
Sbjct: 396 KEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTC 455

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           M+DLLGRAG LD+A  ++K+MP  P+   WGALL AS++H N  +GE AA  I E+EP N
Sbjct: 456 MIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDN 515

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
            G  VL+SN+YA + RW DV  +R  M++  VKK PG+S VEV   +H F  G  V+
Sbjct: 516 SGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTFTVGDSVH 572



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 208/445 (46%), Gaps = 56/445 (12%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N ++  Y+K N+   A  I+  M     E D  +  T++   AQ       + +  
Sbjct: 123 LISWNCMMGGYVKRNRLVDARGIFDRM----PERDEVSWNTMISGYAQNGELLEAQRL-- 176

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              +     D +   A++  Y + G L  AR +FD MP ++ VSW+ +I GY +    ++
Sbjct: 177 --FEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQ 234

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A E+   M                                      C++    V+    +
Sbjct: 235 ARELFEAM-------------------------------------PCQN----VSSWNTM 253

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I  Y++ G++A A+  F+R+ Q   +SW  +I+GY +     E + LF EM  +    + 
Sbjct: 254 ITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNR 313

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T  S +  C  +  L+LGK +H  +++ G E    + NAL+ MY KC  I  A  +F+G
Sbjct: 314 STFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEG 373

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++ K+V+ WN +I+ YA+     +A  LF  MK + + P++VTMVG+LS C+  G ++ G
Sbjct: 374 IEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKG 433

Query: 396 -KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYG 453
            ++ ++  +  G+  +    T ++D+  + G ++ A  L     +  D   W A++    
Sbjct: 434 TEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASR 493

Query: 454 MHG---CGEEA--LIFFVDMERSGV 473
           +HG    GE+A  +IF ++ + SG+
Sbjct: 494 IHGNTELGEKAAKMIFEMEPDNSGM 518



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 116/260 (44%), Gaps = 41/260 (15%)

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           + R +R+AR LFD M  +DV+ WNA++S YAQ   + +A E+F  M       N ++  G
Sbjct: 42  RYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNG 97

Query: 382 LLSLCTEAGALEMGKWLHT----------------YIEKQGL-----------EVDVILK 414
           +L+   + G +E  + L                  Y+++  L           E D +  
Sbjct: 98  MLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSW 157

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
             ++  YA+ G++  A RLF E+  RD+  W AM++GY  +G  +EA   F  M     +
Sbjct: 158 NTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMP----E 213

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
            N +++  ++        + + + +F+ M         +  +  M+    + G + +A  
Sbjct: 214 KNSVSWNAIIAGYVQCKRMDQARELFEAMP-----CQNVSSWNTMITGYAQNGDIAQARN 268

Query: 535 MIKSMPLRPNMIVWGALLAA 554
               MP R + I W A++A 
Sbjct: 269 FFDRMPQR-DSISWAAIIAG 287


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  347 bits (890), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 191/558 (34%), Positives = 301/558 (53%), Gaps = 14/558 (2%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           M   G  V +     +L  C ++      + +HG   K G   D +V+ +L+  Y  CG+
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGA 128

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
              AR LFD MP R+VV+W+ ++ GY     P   LEV  EM  M   PS   + + ++ 
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
                DVDLGK +H   ++   +     ++  +L  +Y+K G+L  A + F R+ + +V+
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESI--TSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVI 246

Query: 242 SWTVMISGYIRCNEINE-GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           +WT MIS      E  E G+ LF +M+ + V P+E T+ S++  CG    L LGK + A+
Sbjct: 247 TWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAF 306

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK- 359
             + G E +L + N+ + +Y +  E   A  LF+ M+   ++ WNA+IS YAQ     K 
Sbjct: 307 SFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKD 366

Query: 360 ----------AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
                     A  +F  +K S ++P+  T   +LS+C+   ALE G+ +H    K G   
Sbjct: 367 DLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLS 426

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           DV++ +ALV+MY KCG +  A + F E   R    W +M++GY  HG  +EA+  F +M 
Sbjct: 427 DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMR 486

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
            +GV+PN ITF+ LL+ACS+AGLV E +  FD M     + P ++HYGCM+D+  R G +
Sbjct: 487 LAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRV 546

Query: 530 DEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIY 589
           ++A   IK     PN  +W +L+A  + H N  +   AA ++LE++P+     +L+ N+Y
Sbjct: 547 EDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMY 606

Query: 590 AVANRWNDVAGVRRVMKE 607
               RW DVA VR++MK+
Sbjct: 607 ISTERWQDVARVRKLMKQ 624



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 147/520 (28%), Positives = 259/520 (49%), Gaps = 51/520 (9%)

Query: 9   NLEQTRQCHAHIIKTHFK---FSYTNIINPLTR---------------------YNSLVT 44
           +L   R  H H+ KT      F  T+++N   R                     + +LVT
Sbjct: 93  SLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMPERNVVTWTALVT 152

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
            Y  N++P+  L ++  M + G    ++T+   L AC       LGK++HG+AIK G + 
Sbjct: 153 GYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAES 212

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
              + N+L  +Y++ GSL SA   F  +P ++V++W+TMI         EE +E+   + 
Sbjct: 213 ITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAED---EECVELGLSL- 268

Query: 165 FMD-----IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
           F+D     + P+E  + S++SL     D++LGK + A   +   +  L V  +T  + +Y
Sbjct: 269 FIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNST--MYLY 326

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-----------EGVRLFAEMIE 268
            + G    A +LF ++   S+++W  MISGY +  +             + + +F ++  
Sbjct: 327 LRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKR 386

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
             + P   T  S++  C  +  L+ G+ +HA  +++GF   + + +ALV+MY KC  I+ 
Sbjct: 387 SVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQD 446

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           A   F  M ++  + W ++IS Y+Q     +A +LF  M+++ VRPNE+T V LLS C+ 
Sbjct: 447 ANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSY 506

Query: 389 AGALEMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWN 446
           AG +E  +     ++K+  +E  V     ++DM+ + G V  A+       +  +  +W+
Sbjct: 507 AGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWS 566

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGI-TFIGLLN 485
           +++AG   HG  E  L F+   +   +KP GI T+I LLN
Sbjct: 567 SLVAGCRSHGNME--LAFYAADKLLELKPKGIETYILLLN 604


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score =  347 bits (889), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 197/634 (31%), Positives = 340/634 (53%), Gaps = 45/634 (7%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRK------------------NGSEVD---------- 70
           YNSL++ Y K+   + A +++  MR+                  NG E+D          
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159

Query: 71  ------NFTIPTILKACAQVLMTHLGKEIHGFAIKNG-LDGDAYVSNALIQMYSEC-GSL 122
                 ++    +++AC+      +G+   GF +K G  + D  V  +LI M+ +   S 
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF 219

Query: 123 VSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLF 182
            +A  +FD+M   +VV+W+ MI    + G P EA+    +M        +  + S+ S  
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279

Query: 183 ADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC---GNLAYAKQLFNRLNQNS 239
           A++ ++ LGK +H+  +R+     L   +  +L+DMY+KC   G++   +++F+R+  +S
Sbjct: 280 AELENLSLGKQLHSWAIRS----GLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHS 335

Query: 240 VVSWTVMISGYIR-CNEINEGVRLFAEMIEE-NVFPSEITILSLIIECGFVGGLQLGKWL 297
           V+SWT +I+GY++ CN   E + LF+EMI + +V P+  T  S    CG +   ++GK +
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
                + G   + ++AN+++ M+ K   +  A+  F+ +  K+++ +N  +    +    
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
           ++AF+L   +   ++  +  T   LLS     G++  G+ +H+ + K GL  +  +  AL
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515

Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
           + MY+KCG ++ A R+F+    R++  W +M+ G+  HG     L  F  M   GVKPN 
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK 537
           +T++ +L+ACSH GLV+EG   F+ M     + PK+EHY CMVDLL RAGLL +A E I 
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635

Query: 538 SMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWND 597
           +MP + +++VW   L A ++H N  +G++AA +ILE++P      + +SNIYA A +W +
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695

Query: 598 VAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
              +RR MKE  + KE G S +EV   +HKF  G
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVG 729



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/541 (24%), Positives = 255/541 (47%), Gaps = 15/541 (2%)

Query: 28  SYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNG-SEVDNFTIPTILKACAQVLM 86
           S  ++ N +   + L+  ++       A++    M ++G   +D+ T  ++LK+C +   
Sbjct: 18  SQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARD 77

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP---NRDVVSWSTM 143
             LGK +H   I+  ++ D+ + N+LI +YS+ G    A  +F+ M     RDVVSWS M
Sbjct: 78  FRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAM 137

Query: 144 IRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
           +  Y   G   +A++V  E   + + P++    +++   ++   V +G+     +++   
Sbjct: 138 MACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGH 197

Query: 204 DEKLGVAIATALIDMYSKCGN-LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
            E   V +  +LIDM+ K  N    A ++F+++++ +VV+WT+MI+  ++     E +R 
Sbjct: 198 FES-DVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRF 256

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F +M+       + T+ S+   C  +  L LGK LH++ +R+G    +    +LVDMY K
Sbjct: 257 FLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAK 314

Query: 323 CR---EIRSARTLFDGMKSKDVMIWNAVISAYAQ-AHCIDKAFELFIHMKVS-KVRPNEV 377
           C     +   R +FD M+   VM W A+I+ Y +  +   +A  LF  M     V PN  
Sbjct: 315 CSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHF 374

Query: 378 TMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
           T       C       +GK +     K+GL  +  +  +++ M+ K   +  A R F   
Sbjct: 375 TFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL 434

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
             +++  +N  + G   +   E+A     ++    +  +  TF  LL+  ++ G + +G+
Sbjct: 435 SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE 494

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
            +  ++V  LGL         ++ +  + G +D A  +   M  R N+I W +++     
Sbjct: 495 QIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR-NVISWTSMITGFAK 552

Query: 558 H 558
           H
Sbjct: 553 H 553


>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  347 bits (889), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 174/538 (32%), Positives = 294/538 (54%), Gaps = 42/538 (7%)

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVSLFADVA 186
           +F ++PN      + ++R   R   PE+ + +   +R ++       +  S++   + V+
Sbjct: 76  VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135

Query: 187 DVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVS 242
             + G  IH          KLG      I T LI MY+ C  +  A+ LF+++     V+
Sbjct: 136 AFNHGLEIHGLA------SKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVA 189

Query: 243 WTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYIL 302
           W ++I GY +    ++ +RLF +M   ++ P  + + +++  CG  G L  G+ +H ++ 
Sbjct: 190 WNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVK 249

Query: 303 RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK----------------------- 339
            NG+     +  AL++MY  C  +  AR ++DG+ SK                       
Sbjct: 250 DNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARF 309

Query: 340 --------DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
                   D++ W+A+IS YA++    +A +LF  M   +  P+++TM+ ++S C+  GA
Sbjct: 310 IFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGA 369

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L    W+HTY+++ G    + +  AL+DMYAKCG++  A  +F     +++  W++M+  
Sbjct: 370 LAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINA 429

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           + MHG  + A+  F  M+   ++PNG+TFIG+L AC HAGLV EG+ +F  M++  G+ P
Sbjct: 430 FAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISP 489

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
             EHYGCMVDL  RA  L +A E+I++MP  PN+I+WG+L++A ++H    +GE AA ++
Sbjct: 490 TREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRL 549

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           LE+EP + G  V++SNIYA   RWNDV  +R+ M    + KE   S +E+N  VH F+
Sbjct: 550 LELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFM 607



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 144/466 (30%), Positives = 246/466 (52%), Gaps = 37/466 (7%)

Query: 29  YTNIINPLTRY-NSLVTSYIKNNKPSSALNIYAFMRK-NGSEVDNFTIPTILKACAQVLM 86
           ++ I NP T + N L+    +++ P   + +Y  +R  N   +D F+ P++LKA ++V  
Sbjct: 77  FSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSA 136

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
            + G EIHG A K G   D ++   LI MY+ C  ++ AR LFD+M + D V+W+ +I G
Sbjct: 137 FNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDG 196

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           Y + G  ++AL +  +MR  D++P  V + +++S      ++  G+ IH  V  N     
Sbjct: 197 YCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDN--GYA 254

Query: 207 LGVAIATALIDMYSKCGNLAYAKQ-------------------------------LFNRL 235
           +   + TALI+MY+ CG +  A++                               +F+++
Sbjct: 255 IDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQM 314

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
            +  +V W+ MISGY   ++  E ++LF EM+++   P +IT+LS+I  C  VG L    
Sbjct: 315 IERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQAN 374

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
           W+H Y+ R+GF  +L++ NAL+DMY KC  +  AR +F+ M  K+V+ W+++I+A+A   
Sbjct: 375 WIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHG 434

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILK 414
             D A +LF  MK   + PN VT +G+L  C  AG +E G K   + I + G+       
Sbjct: 435 NADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHY 494

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHGCGE 459
             +VD+Y +   +  A  L     +  ++ +W ++M+   +HG  E
Sbjct: 495 GCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAE 540


>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1359

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 187/581 (32%), Positives = 326/581 (56%), Gaps = 4/581 (0%)

Query: 54   SALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALI 113
            S+L +Y   + N  ++ + +    L AC+Q   +  G++IH   +K GLD D YVS +L+
Sbjct: 754  SSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLL 813

Query: 114  QMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEV 173
             MYS+CG +  A  +F  + ++ +  W+ M+  Y        ALE+   MR   + P   
Sbjct: 814  SMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSF 873

Query: 174  AMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFN 233
             + +++S  +     D GK++HA + +  +  +   AI +AL+ +YSKCG    A  +F 
Sbjct: 874  TLSNVISCCSMFGLYDYGKSVHAELFK--RPIQSTPAIESALLTLYSKCGCDTDAYLVFK 931

Query: 234  RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN--VFPSEITILSLIIECGFVGGL 291
             + +  +V+W  +ISG  +  +  E +++F +M +++  + P    + S+I  C  +  L
Sbjct: 932  SMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEAL 991

Query: 292  QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
              G  +H  +++ G   ++ + ++L+D+Y KC     A  +F  M+ ++++ WN++IS Y
Sbjct: 992  SFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCY 1051

Query: 352  AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
            ++ +  + + ELF  M    + P+ V++  +L   +   +L  GK LH Y  + G+  D 
Sbjct: 1052 SRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDT 1111

Query: 412  ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
             LK AL+DMY KCG    A  +F +  ++ +  WN M+ GYG HG    AL  F +++++
Sbjct: 1112 HLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKA 1171

Query: 472  GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
            G  P+ +TF+ L++AC+H+G V EGK+ F+ M    G+ PK+EHY  MVDLLGRAG L+E
Sbjct: 1172 GETPDDVTFLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEE 1231

Query: 532  AHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAV 591
            A+  IK+MP   +  +W  LL+AS+ H N  +G ++A ++L +EP+     V + N+Y  
Sbjct: 1232 AYSFIKAMPTEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYME 1291

Query: 592  ANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
            A   N+ A +   MKE  ++K+PG S +EV+ + + F  GG
Sbjct: 1292 AGLKNEAAKLLGEMKERGLQKQPGCSWIEVSDISNVFFSGG 1332



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 148/539 (27%), Positives = 266/539 (49%), Gaps = 21/539 (3%)

Query: 40   NSLVTSYIKNNKPSSALNIYAFMRKNGSE---VDNFTIPTILKACAQVLMTHLGKEIHGF 96
            NS + + I+  +   AL++Y   + +GS       FT P++LKAC+ +     GK IHG 
Sbjct: 529  NSGIRALIQKGEYLQALHLYT--KHDGSSPLWTSVFTFPSLLKACSSLTNLSSGKTIHGS 586

Query: 97   AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFD-----EMPNRDVVSWSTMIRGYHRGG 151
             I  G   D +++ +L+ MY +CG L  A  +FD      +  RDV   ++MI GY +  
Sbjct: 587  IIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSGVSARDVTVCNSMIDGYFKFR 646

Query: 152  LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV--DLGKAIHACVVRNCKDEKLGV 209
              +E +   R M  + +RP   ++  +VS+     +   + GK IH  ++RN  D     
Sbjct: 647  RFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRREDGKQIHGYMLRNSLDGD--S 704

Query: 210  AIATALIDMYSKCGNLAYAKQLFNRL-NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
             + TALIDMY K G    A ++F  + ++++VV W VMI G+         + L+     
Sbjct: 705  FLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGGSEICESSLELYMLAKS 764

Query: 269  ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
             +V     +    +  C        G+ +H  +++ G +    ++ +L+ MY KC  +  
Sbjct: 765  NSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGE 824

Query: 329  ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
            A T+F  +  K + IWNA+++AY +      A ELF  M+   V P+  T+  ++S C+ 
Sbjct: 825  AETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSVLPDSFTLSNVISCCSM 884

Query: 389  AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
             G  + GK +H  + K+ ++    +++AL+ +Y+KCG    AY +F     +D+  W ++
Sbjct: 885  FGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSL 944

Query: 449  MAGYGMHGCGEEALIFFVDM--ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
            ++G   +G  +EAL  F DM  +   +KP+      ++NAC+    ++ G  V   M+  
Sbjct: 945  ISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKT 1004

Query: 507  LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP-NMIVWGALLAASKLHKNPSMG 564
             G V  +     ++DL  + GL + A ++  SM  RP N++ W ++++    +  P + 
Sbjct: 1005 -GQVLNVFVGSSLIDLYSKCGLPEMALKVFTSM--RPENIVAWNSMISCYSRNNLPELS 1060



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 202/399 (50%), Gaps = 18/399 (4%)

Query: 177 SMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLN 236
           S++   + + ++  GK IH  ++      +    IAT+L++MY KCG L YA Q+F+  +
Sbjct: 566 SLLKACSSLTNLSSGKTIHGSII--VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWS 623

Query: 237 QNSVVSWTV-----MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGG- 290
           Q+ V +  V     MI GY +     EGV  F  M+   V P   + LS+++      G 
Sbjct: 624 QSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFS-LSIVVSVLCKEGN 682

Query: 291 --LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAV 347
              + GK +H Y+LRN  +    +  AL+DMY K      A  +F  ++ K +V++WN +
Sbjct: 683 FRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVM 742

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           I  +  +   + + EL++  K + V+    +  G L  C+++     G+ +H  + K GL
Sbjct: 743 IVGFGGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGL 802

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
           + D  + T+L+ MY+KCG V  A  +FS  + + + +WNAM+A Y  +  G  AL  F  
Sbjct: 803 DNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGF 862

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRA 526
           M +  V P+  T   +++ CS  GL   GKSV  ++    +   P IE    ++ L  + 
Sbjct: 863 MRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIE--SALLTLYSKC 920

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
           G   +A+ + KSM  + +M+ WG+L+  S L KN    E
Sbjct: 921 GCDTDAYLVFKSMEEK-DMVAWGSLI--SGLCKNGKFKE 956



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 190/379 (50%), Gaps = 17/379 (4%)

Query: 39   YNSLVTSYIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLGKEIHGF 96
            + SL++   KN K   AL ++  M+ +   +  D+  + +++ ACA +     G ++HG 
Sbjct: 941  WGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGS 1000

Query: 97   AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
             IK G   + +V ++LI +YS+CG    A  +F  M   ++V+W++MI  Y R  LPE +
Sbjct: 1001 MIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELS 1060

Query: 157  LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT--- 213
            +E+   M    I P  V++ S++   +  A +  GK++H   +R      LG+   T   
Sbjct: 1061 IELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR------LGIPSDTHLK 1114

Query: 214  -ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
             ALIDMY KCG   YA+ +F ++   S+++W +MI GY    +    + LF E+ +    
Sbjct: 1115 NALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGET 1174

Query: 273  PSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSART 331
            P ++T LSLI  C   G ++ GK     + ++ G E  +     +VD+ G+   +  A +
Sbjct: 1175 PDDVTFLSLISACNHSGFVEEGKNFFEIMKQDYGIEPKMEHYANMVDLLGRAGRLEEAYS 1234

Query: 332  LFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE-VTMVGLLSLCTEA 389
                M ++ D  IW  ++SA    H ++    +    K+ ++ P    T V L++L  EA
Sbjct: 1235 FIKAMPTEADSSIWLCLLSASRTHHNVE--LGILSAEKLLRMEPERGSTYVQLINLYMEA 1292

Query: 390  GALEMGKWLHTYIEKQGLE 408
            G       L   ++++GL+
Sbjct: 1293 GLKNEAAKLLGEMKERGLQ 1311


>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Brachypodium distachyon]
          Length = 552

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 180/476 (37%), Positives = 275/476 (57%), Gaps = 36/476 (7%)

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL---NQNSVVSWTVM 246
           +G A+HA VV+   +  L   +A++L+ MY+  G+ A A+ L +       ++ V W  +
Sbjct: 37  VGDAVHAHVVKFGME--LNAHVASSLVLMYAARGDGAVARTLLDAWPARGGDTPVVWNAL 94

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           ISG+ R  +       F +M+   V P+ +T ++++  CG    + LG  +H  ++ +G 
Sbjct: 95  ISGHRRSRQFRLSCCSFVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVVASGV 154

Query: 307 EFSLAMANALVDMYGKCRE-------------------------------IRSARTLFDG 335
              L + NAL+DMY +C E                               +  ARTLFD 
Sbjct: 155 LPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDC 214

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M  +D + W A+I  Y QA    +A E+F  M+ SKVR +E TMV +++ C + GALE G
Sbjct: 215 MPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGALETG 274

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           +W   Y+ + G+++D  +  ALVDMY+KCG +  A  +F E   RD   W A++ G  ++
Sbjct: 275 EWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVN 334

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G GEEA+  F  M R    P+ +TFIG+L AC+HAGLV +G+  F  M    G+ P + H
Sbjct: 335 GHGEEAINMFYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMH 394

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           +GC++DLLGRAG L EA E I +MP+RPN  +WG LLAA ++H N  +G++AA  +LE++
Sbjct: 395 FGCLIDLLGRAGKLKEALETIGNMPMRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLELD 454

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            +N    +L+SN+YA +NRW DV  +R+V+ E  +KKEPG S +E+NG +H+FI G
Sbjct: 455 TENGMVYILLSNLYAKSNRWEDVRRLRQVIMEKGIKKEPGCSLIEMNGTIHEFIAG 510



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 206/443 (46%), Gaps = 43/443 (9%)

Query: 56  LNIYAFMRKNGSEVDNFTIPTILKA-CAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
           L +Y  M   G+  D +T P +LKA  A      +G  +H   +K G++ +A+V+++L+ 
Sbjct: 3   LRVYVGMLARGARPDAYTFPPLLKAVTAAAERGAVGDAVHAHVVKFGMELNAHVASSLVL 62

Query: 115 MYSECGSLVSARYLFDEMPNR---DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPS 171
           MY+  G    AR L D  P R     V W+ +I G+ R      +     +M    + P+
Sbjct: 63  MYAARGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPT 122

Query: 172 EVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALIDMYSKC------- 222
            V  I+++S       + LG  +H CVV +    D K+G     ALIDMY++C       
Sbjct: 123 PVTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVG----NALIDMYAECSEMDAAW 178

Query: 223 ------------------------GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE 258
                                   G +  A+ LF+ + +   VSWT MI GY++  +  E
Sbjct: 179 ELFEGMEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFRE 238

Query: 259 GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
            + +F EM    V   E T++S++  C  +G L+ G+W   Y+ R+G +    + NALVD
Sbjct: 239 ALEMFREMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVD 298

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
           MY KC  I+ A  +F  M  +D   W AVI   A     ++A  +F  M      P+EVT
Sbjct: 299 MYSKCGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVT 358

Query: 379 MVGLLSLCTEAGALEMGK-WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
            +G+L+ CT AG ++ G+ +  +     G+  +V+    L+D+  + G +  A       
Sbjct: 359 FIGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNM 418

Query: 438 IYR-DICMWNAMMAGYGMHGCGE 459
             R +  +W  ++A   +HG  E
Sbjct: 419 PMRPNSAIWGTLLAACRVHGNSE 441



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 113/429 (26%), Positives = 187/429 (43%), Gaps = 73/429 (17%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L++ + ++ +   +   +  M + G      T  T+L AC +     LG ++H   +
Sbjct: 91  WNALISGHRRSRQFRLSCCSFVDMVRTGVVPTPVTYITVLSACGKDKYIWLGMQVHKCVV 150

Query: 99  KNGLDGDAYVSNALIQMYSEC-------------------------------GSLVSARY 127
            +G+  D  V NALI MY+EC                               G +  AR 
Sbjct: 151 ASGVLPDLKVGNALIDMYAECSEMDAAWELFEGMEVRNTVSWTSVISGFLRLGQVDQART 210

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           LFD MP RD VSW+ MI GY + G   EALE+ REM+F  +R  E  M+S+V+  A +  
Sbjct: 211 LFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREMQFSKVRADEFTMVSVVTACAQLGA 270

Query: 188 VDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           ++ G+     + R+    K+   +  AL+DMYSKCG++  A  +F  +      +WT +I
Sbjct: 271 LETGEWARIYMSRH--GIKMDTFVGNALVDMYSKCGSIQQALGVFKEMYIRDKFTWTAVI 328

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
            G        E + +F  M+     P E+T + ++  C            HA ++  G +
Sbjct: 329 LGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGVLTAC-----------THAGLVDKGRD 377

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
           F L+M  +    YG                + +VM +  +I    +A  + +A E   +M
Sbjct: 378 FFLSMTGS----YG---------------IAPNVMHFGCLIDLLGRAGKLKEALETIGNM 418

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV---ILKTALVDMYAKC 424
               +RPN      LL+ C   G  E+G+    ++    LE+D    ++   L ++YAK 
Sbjct: 419 ---PMRPNSAIWGTLLAACRVHGNSEIGQLAAEHL----LELDTENGMVYILLSNLYAKS 471

Query: 425 GDVNGAYRL 433
                  RL
Sbjct: 472 NRWEDVRRL 480


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 172/440 (39%), Positives = 275/440 (62%), Gaps = 4/440 (0%)

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           G+ +HA +++ C      V ++T LI +Y+KC  L  A+ +F+ + + +VVSWT MISGY
Sbjct: 29  GQRVHAHMIKTCYLPP--VYLSTRLIILYTKCECLGCARHVFDEMRERNVVSWTAMISGY 86

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
            +    +E + LF +M+  +  P+E T  +++  C    G +LG+ +H++I +  +E  +
Sbjct: 87  SQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHI 146

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
            + ++L+DMY K   I  AR +F+ +  +DV+   A+IS YAQ    ++A ELF  ++  
Sbjct: 147 FVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALELFCRLQRE 206

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
            +  N VT   LL+  +   AL+ GK +H+++ +  L   V+L+ +L+DMY+KCG++N A
Sbjct: 207 GMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQNSLIDMYSKCGNLNYA 266

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM-ERSGVKPNGITFIGLLNACSH 489
            ++F+    R +  WNAM+ GY  HG G E +  F  M E + VKP+ +TF+ +L+ CSH
Sbjct: 267 RKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSH 326

Query: 490 AGLVTEGKSVFDKMVHGLGLVPK-IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
            GL  +G  +FD+M++G   +   IEHYGC++DLLGRAG ++EA E+IK MP  P   +W
Sbjct: 327 GGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIW 386

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
           G+LL A ++H N ++GE    ++LEIEP+N G  V++SN+YA A RW DV  VR +M E 
Sbjct: 387 GSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAGRWEDVRNVRELMMEK 446

Query: 609 RVKKEPGFSSVEVNGLVHKF 628
            V KEPG S +E++  +H F
Sbjct: 447 AVIKEPGRSWIELDQTIHTF 466



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 205/398 (51%), Gaps = 6/398 (1%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           M   G E+       +L  C        G+ +H   IK       Y+S  LI +Y++C  
Sbjct: 1   MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCEC 60

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           L  AR++FDEM  R+VVSW+ MI GY + G   EAL +  +M   D  P+E    +++S 
Sbjct: 61  LGCARHVFDEMRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSS 120

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
               +  +LG+ IH+ + +  ++ +  + + ++L+DMY+K G +  A+ +F  L +  VV
Sbjct: 121 CTGFSGFELGRQIHSHIFK--RNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVV 178

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           S T +ISGY +     E + LF  +  E +  + +T  SL+     +  L  GK +H+++
Sbjct: 179 SCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHV 238

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
           LR    F + + N+L+DMY KC  +  AR +F+ M  + V+ WNA++  Y++     +  
Sbjct: 239 LRCELPFYVVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVV 298

Query: 362 ELFIHMK-VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT--ALV 418
           +LF  M+  +KV+P+ VT + +LS C+  G  + G  +   +   G E++  ++    ++
Sbjct: 299 KLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVI 358

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDI-CMWNAMMAGYGMH 455
           D+  + G V  A+ L  +  +     +W +++    +H
Sbjct: 359 DLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGACRVH 396



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 172/316 (54%), Gaps = 6/316 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + ++++ Y +    S AL+++  M ++ +E + FT  T+L +C       LG++IH    
Sbjct: 79  WTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIF 138

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K   +   +V ++L+ MY++ G +  AR +F+ +P RDVVS + +I GY + GL EEALE
Sbjct: 139 KRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEEALE 198

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   ++   +  + V   S+++  + +A +D GK +H+ V+R C +    V +  +LIDM
Sbjct: 199 LFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLR-C-ELPFYVVLQNSLIDM 256

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN-VFPSEIT 277
           YSKCGNL YA+++FN +   +V+SW  M+ GY +  +  E V+LF  M EEN V P  +T
Sbjct: 257 YSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVT 316

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN--ALVDMYGKCREIRSARTLFDG 335
            L+++  C   G    G  +   ++  G E    + +   ++D+ G+   +  A  L   
Sbjct: 317 FLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAFELIKK 376

Query: 336 MK-SKDVMIWNAVISA 350
           M       IW +++ A
Sbjct: 377 MPFEPTAAIWGSLLGA 392



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 150/282 (53%), Gaps = 10/282 (3%)

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           L+ EC     ++ G+ +HA++++  +   + ++  L+ +Y KC  +  AR +FD M+ ++
Sbjct: 16  LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGCARHVFDEMRERN 75

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           V+ W A+IS Y+Q     +A  LF+ M  S   PNE T   +LS CT     E+G+ +H+
Sbjct: 76  VVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHS 135

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
           +I K+  E  + + ++L+DMYAK G ++ A  +F     RD+    A+++GY   G  EE
Sbjct: 136 HIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLGLDEE 195

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY---- 516
           AL  F  ++R G+  N +T+  LL A S    +  GK      VH   L  ++  Y    
Sbjct: 196 ALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQ-----VHSHVLRCELPFYVVLQ 250

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             ++D+  + G L+ A ++  +MP+R  +I W A+L     H
Sbjct: 251 NSLIDMYSKCGNLNYARKIFNNMPVR-TVISWNAMLVGYSKH 291


>gi|255559100|ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540232|gb|EEF41805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 695

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 193/599 (32%), Positives = 335/599 (55%), Gaps = 11/599 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++V+ Y+K  +   A+  +  M K G +    +   +  A + V        ++G  +
Sbjct: 68  WNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSVGDFKNANVLYGMLL 127

Query: 99  K--NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY-HRGGLPEE 155
           K  N    D +V ++ I MY+E G L   R +FD    +    W+TMI G+       E 
Sbjct: 128 KLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTMIGGHIQNNSFLEG 187

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
               ++ M+       +V  +S ++  + +  + LG+ +HA  ++N     L V +  A+
Sbjct: 188 VYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKN--HTVLSVTVLNAI 245

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           + MYS+C ++  + ++F ++ +  VVSW  MISG+I+     EG+ L  EM ++      
Sbjct: 246 LVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFIADS 305

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T+ SL+     +   ++GK  HAY++R+G +F   M + L+DMY K   IR ++ +F+ 
Sbjct: 306 VTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFD-GMDSYLIDMYAKSGLIRISQRVFEN 364

Query: 336 --MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
             ++++D   WNAVI+ Y Q   +++AF  F  M    +RPN VT+  +L  C+  G++ 
Sbjct: 365 NNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSLGSIN 424

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           +GK LH    +  L+ ++ ++TALVDMY+K G +N A  +F+++  R+   +  M+ GYG
Sbjct: 425 LGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERNSVTYTTMILGYG 484

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            HG GE AL  F  M++SG++P+ ITF+ +L+ACS+AGLV EG  +F+ M     + P  
Sbjct: 485 QHGMGENALSLFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIFESMKRDFKIQPST 544

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI-VWGALLAASKLHKNPSMGEIAATQIL 572
            HY C+ D+LGR G + EA+E +K +    ++I +WG+LL A +LH +  +GE  + ++L
Sbjct: 545 AHYCCVADMLGRVGRVIEAYEFVKQLGEEGHVIEIWGSLLGACRLHGHIELGEEVSNRLL 604

Query: 573 EIEPQNY--GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           E+   +   GY VL+SN+YA    W  V  +R+ M+E  ++KE G S ++  GL+ +F+
Sbjct: 605 EMNSVDRLAGYQVLLSNMYAEEANWETVDKLRKSMREKGLRKEVGCSWIDTGGLLVRFV 663



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 227/450 (50%), Gaps = 23/450 (5%)

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM---DIRPSEVAMISMVSLFAD 184
           +F  M  RDV++W+TM+  Y +    E  +E +R+ R M    I+PS V+ +++    + 
Sbjct: 56  VFKTMHKRDVIAWNTMVSWYVK---TERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISS 112

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
           V D      ++  +++   +    + + ++ I MY++ G L   +++F+   + S   W 
Sbjct: 113 VGDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWN 172

Query: 245 VMISGYIRCNEINEGVRLFAE-MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
            MI G+I+ N   EGV LF + M  E+    ++T LS +     +  L LG+ +HA+ ++
Sbjct: 173 TMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMK 232

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
           N    S+ + NA++ MY +C  ++++  +F+ M  KDV+ WN +IS + Q    ++   L
Sbjct: 233 NHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLML 292

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
              M+      + VT+  LLS  +     E+GK  H Y+ + G++ D  + + L+DMYAK
Sbjct: 293 VYEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDG-MDSYLIDMYAK 351

Query: 424 CGDVNGAYRLF--SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
            G +  + R+F  +    RD   WNA++AGY  +G  E+A I F  M    ++PN +T  
Sbjct: 352 SGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLA 411

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH----YGCMVDLLGRAGLLDEAHEMIK 537
            +L ACS  G +  GK      +HG+ +   ++        +VD+  ++G ++ A  +  
Sbjct: 412 SILPACSSLGSINLGKQ-----LHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFT 466

Query: 538 SMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
               R N + +  ++     H    MGE A
Sbjct: 467 QSSER-NSVTYTTMILGYGQH---GMGENA 492



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 74/330 (22%), Positives = 166/330 (50%), Gaps = 8/330 (2%)

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           ++F  +++  V++W  M+S Y++     E +R F  M++  + PS ++ +++      VG
Sbjct: 55  KVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSVG 114

Query: 290 GLQLGKWLHAYILRNGFEFS--LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
             +    L+  +L+ G E++  L + ++ + MY +   +   R +FD    K   +WN +
Sbjct: 115 DFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTM 174

Query: 348 ISAYAQAHCIDKAFELFIH-MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           I  + Q +   +   LF+  MK      ++VT +  L+  ++   L +G+ +H +  K  
Sbjct: 175 IGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNH 234

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
             + V +  A++ MY++C  V  ++ +F +   +D+  WN M++G+  +G  EE L+   
Sbjct: 235 TVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVY 294

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGR 525
           +M++ G   + +T   LL+A S+      GK     ++ HG+     ++ Y  ++D+  +
Sbjct: 295 EMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKF-DGMDSY--LIDMYAK 351

Query: 526 AGLLDEAHEMIKSMPLR-PNMIVWGALLAA 554
           +GL+  +  + ++  ++  +   W A++A 
Sbjct: 352 SGLIRISQRVFENNNIQNRDQATWNAVIAG 381



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/238 (20%), Positives = 104/238 (43%), Gaps = 9/238 (3%)

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           + R  R    +F  M  +DV+ WN ++S Y +     +A   F  M    ++P+ V+ V 
Sbjct: 46  RSRLSRLLHKVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVN 105

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEV--DVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
           +    +  G  +    L+  + K G E   D+ + ++ + MYA+ G ++   ++F   + 
Sbjct: 106 VFPAISSVGDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLE 165

Query: 440 RDICMWNAMMAGYGMHGCGEEALIFFVD-MERSGVKPNGITFIGLLNACSHAGLVTEGKS 498
           +   +WN M+ G+  +    E +  F+  M+      + +TF+  L A S    +  G+ 
Sbjct: 166 KSAEVWNTMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQ 225

Query: 499 V--FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +  F    H    V  +     ++ +  R   +  + E+ + MP   +++ W  +++ 
Sbjct: 226 MHAFTMKNH---TVLSVTVLNAILVMYSRCNSVQTSFEVFEKMP-EKDVVSWNTMISG 279


>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
          Length = 1072

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 190/593 (32%), Positives = 311/593 (52%), Gaps = 56/593 (9%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           ++H      GL      S  LI+ Y++ G   S++ +FD  P  D   W  +I+ Y  GG
Sbjct: 366 QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 425

Query: 152 LPEEALEVMREMRFMD-------------------------------------------- 167
             EEA+ +  EM + D                                            
Sbjct: 426 FFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKNGQASEGLDMFSQMISE 485

Query: 168 -IRPSEVAMISMVSLFADVADVDLGK--------AIHACVVRNCKDEKLGVAIATALIDM 218
            + P  V M+S+    +++  + LG+        ++H  V+R   D +L   +  AL+++
Sbjct: 486 AVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIRRAMDPELDF-LGPALMEL 544

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+  GNL    ++F  + + +++SW  +IS + R  +  E + LF +M  + + P   ++
Sbjct: 545 YADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSL 604

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +  CG +   QLG  +H YI++ G  F+  + NAL+DMY KC  + SA  +F+ +K 
Sbjct: 605 ASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKIKE 663

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K ++ WN++I  ++Q     +A  LF  M ++ V+ +++T + ++  C+  G LE GKW+
Sbjct: 664 KSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWV 723

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  +   GL  D  L TAL DMY+KCG++  A+ +F     R I  W+ M+AGYGMHG  
Sbjct: 724 HHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQI 783

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
              +  F  M  SG+KPN ITF+ +L+ACSHAG V EGK  F+ M    G+ PK +H+ C
Sbjct: 784 NATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSE-FGVEPKHDHFAC 842

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLL RAG L+ A+++I S+P   N  +WGALL   ++HK   + +     +L+++  +
Sbjct: 843 MVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIEKNLLDVDTAD 902

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            GY  L+SNIYA    W+    VR +MK   ++K PG+S++E++  +++F  G
Sbjct: 903 TGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRFGPG 955



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 227/418 (54%), Gaps = 13/418 (3%)

Query: 48  KNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL--------GKEIHGFAIK 99
           KN + S  L++++ M     E D+ T+ ++ +AC+++    L        G+ +HGF I+
Sbjct: 468 KNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVHGFVIR 527

Query: 100 NGLDGD-AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             +D +  ++  AL+++Y++ G+L     +F+ +  + ++SW+T+I  + R G PEEAL 
Sbjct: 528 RAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALL 587

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+   + P   ++ S +S    ++   LG  IH  ++   K       +  ALIDM
Sbjct: 588 LFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYII---KTGNFNDFVQNALIDM 644

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG +  A ++F ++ + S+V+W  MI G+ +     E + LF +M    V   ++T 
Sbjct: 645 YAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTF 704

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           LS+I  C  +G L+ GKW+H  ++  G      +  AL DMY KC E++ A  +FD M  
Sbjct: 705 LSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSE 764

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           + ++ W+ +I+ Y     I+    LF  M  S ++PN++T + +LS C+ AGA+E GK  
Sbjct: 765 RSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLY 824

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY-RDICMWNAMMAGYGMH 455
              + + G+E        +VD+ ++ GD+NGAY++ +   +  +  +W A++ G  +H
Sbjct: 825 FNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIH 882



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 175/315 (55%), Gaps = 8/315 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L++ + +N +P  AL ++  M+  G   D++++ + L AC  +  + LG +IHG+ I
Sbjct: 569 WNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYII 628

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   D +V NALI MY++CG + SA  +F+++  + +V+W++MI G+ + G   EA+ 
Sbjct: 629 KTGNFND-FVQNALIDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAIT 687

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC--KDEKLGVAIATALI 216
           +  +M    ++  ++  +S++   + +  ++ GK +H  ++     KD  L     TAL 
Sbjct: 688 LFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLD----TALT 743

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           DMYSKCG L  A  +F+R+++ S+VSW+VMI+GY    +IN  + LF +M+   + P++I
Sbjct: 744 DMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDI 803

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T + ++  C   G ++ GK     +   G E        +VD+  +  ++  A  +   +
Sbjct: 804 TFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSL 863

Query: 337 K-SKDVMIWNAVISA 350
               +  IW A+++ 
Sbjct: 864 PFPANSSIWGALLNG 878



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 13/220 (5%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NS++  + +N     A+ ++  M  N  ++D  T  ++++AC+ +     GK +H 
Sbjct: 666 LVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGKWVHH 725

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             I  GL  D+Y+  AL  MYS+CG L  A  +FD M  R +VSWS MI GY   G    
Sbjct: 726 KLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGMHGQINA 785

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA--- 212
            + +  +M    I+P+++  + ++S  +    V+ GK     +       + GV      
Sbjct: 786 TISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSM------SEFGVEPKHDH 839

Query: 213 -TALIDMYSKCGNLAYAKQLFNRL--NQNSVVSWTVMISG 249
              ++D+ S+ G+L  A Q+   L    NS + W  +++G
Sbjct: 840 FACMVDLLSRAGDLNGAYQIITSLPFPANSSI-WGALLNG 878


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 198/621 (31%), Positives = 341/621 (54%), Gaps = 29/621 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN-FTIPTILKACAQVLMTHLG--KEIHG 95
           +N++++++++N     AL ++  M ++G+   N  T  ++L +C +  +  L   + IHG
Sbjct: 213 WNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHG 272

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF----DEMPNRDVVSWSTMIRGYHRGG 151
             +  G++ +A+V  AL+  Y + GSL  A  +F    DE P+  +V+ S MI    + G
Sbjct: 273 RIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNG 332

Query: 152 LPEEALEVMREMRFMDIRPSEVAMIS------MVSLFADVADVDLGKAIHACVVRNCKDE 205
            P+E+L +   M     +PS V ++S      M+ + +  A V L +A+   VV   +D 
Sbjct: 333 WPQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFV-LEQAME--VVSATRDN 389

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
            LG    T L+  Y++  +L  A+  F+ +    VVSW  M + Y++ +   E + LF  
Sbjct: 390 VLG----TTLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFER 445

Query: 266 MIEENVFPSEITILSLIIECGFV---GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           M+ E V PS  T ++ +  C          +GK + + +   G E   A+ANA ++MY K
Sbjct: 446 MLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAK 505

Query: 323 CREIRSARTLFDGMKS--KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTM 379
           C  +  AR +F+ +    +D + WN++++AY       +AFELF  M+  K V+PN+VT 
Sbjct: 506 CGSLADARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTF 565

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF--SEA 437
           V +L   T   ++  G+ +H  +   G E D +++ AL++MYAKCG ++ A  +F  S +
Sbjct: 566 VAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSS 625

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
              D+  W +++AGY  +G  E AL  F  M++ GV+PN +TFI  L AC+H G + +G 
Sbjct: 626 NQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGC 685

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
            +   M    G++P  +H+ C+VDLLGR G LDEA ++++    + ++I W ALL A K 
Sbjct: 686 ELLSGMTPDHGILPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QADVITWMALLDACKN 744

Query: 558 HKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
            K    GE  A +I++++P+     ++++++YA A RWN+ A +R+ M +  ++ +PG S
Sbjct: 745 SKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCS 804

Query: 618 SVEVNGLVHKFIRGGMVNWKS 638
           +VEVN  +H F  G   + KS
Sbjct: 805 AVEVNQELHSFSAGDKSHPKS 825



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 162/538 (30%), Positives = 273/538 (50%), Gaps = 36/538 (6%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFM--RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
            +++ +++++ +P  A+ ++  M  R N        +  ++ AC+ +     G+ IH   
Sbjct: 113 TAMIRAWMEHGRPDKAMELFDRMEVRPNC-----HALIALVNACSCLGNLAAGRRIHSQI 167

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP---NRDVVSWSTMIRGYHRGGLPE 154
                + ++ + NALI MYS+CGSL+ A+  FD +P    RDVV+W+ MI  + R G   
Sbjct: 168 SDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAR 227

Query: 155 EALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLG--KAIHACVVRNCKDEKLGVAI 211
           EAL++ R+M R     P+ V  +S++    +   + L   +AIH  +V    + +    +
Sbjct: 228 EALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIERE--AFV 285

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQ----NSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            TAL+D Y K G+L  A ++F R        S+V+ + MIS   +     E +RLF  M 
Sbjct: 286 RTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMN 345

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA-----MANALVDMYGK 322
            E   PS +T++S++  C     LQ+G    A++L    E   A     +   L+  Y +
Sbjct: 346 LEGTKPSGVTLVSVLNACSM---LQVGS-ATAFVLEQAMEVVSATRDNVLGTTLLTTYAR 401

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
             ++  AR  FD ++S DV+ WNA+ +AY Q H   +A  LF  M +  VRP+  T +  
Sbjct: 402 SNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITA 461

Query: 383 LSLCT---EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE--A 437
           L+ C       A  +GK + + +E+ GLE D  +  A ++MYAKCG +  A  +F     
Sbjct: 462 LTACAAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISP 521

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSHAGLVTEG 496
             RD   WN+M+A YG HG G+EA   F  ME    VKPN +TF+ +L+A +    + +G
Sbjct: 522 ARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQG 581

Query: 497 KSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI-KSMPLRPNMIVWGALLA 553
           + +  ++V   G          ++++  + G LD+A  +  KS   + ++I W +L+A
Sbjct: 582 REIHARVVSN-GFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIA 638



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 152/508 (29%), Positives = 255/508 (50%), Gaps = 35/508 (6%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLD--GDAYVSNALIQMYSECGSLVSARYLFD 130
           T   +L+AC ++     G+ +H   +   +D    +++++ LI M+++CG+L  A  L D
Sbjct: 45  TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
              +  V S + MIR +   G P++A+E+      M++RP+  A+I++V+  + + ++  
Sbjct: 105 RFAS--VYSCTAMIRAWMEHGRPDKAMELFDR---MEVRPNCHALIALVNACSCLGNLAA 159

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS---VVSWTVMI 247
           G+ IH+ +  + +D +    +  ALI MYSKCG+L  AKQ F+RL + S   VV+W  MI
Sbjct: 160 GRRIHSQI--SDRDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMI 217

Query: 248 SGYIRCNEINEGVRLFAEMIEENV-FPSEITILSLIIECGFVGGLQLG--KWLHAYILRN 304
           S ++R     E ++LF +M  +    P+ +T +S++  C   G L L   + +H  I+  
Sbjct: 218 SAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGA 277

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLF----DGMKSKDVMIWNAVISAYAQAHCIDKA 360
           G E    +  ALVD YGK   +  A  +F    D   S  ++  +A+ISA  Q     ++
Sbjct: 278 GIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQES 337

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV-----DVILKT 415
             LF  M +   +P+ VT+V +L+ C+    L++G     ++ +Q +EV     D +L T
Sbjct: 338 LRLFFAMNLEGTKPSGVTLVSVLNACS---MLQVGS-ATAFVLEQAMEVVSATRDNVLGT 393

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
            L+  YA+  D+  A   F      D+  WNAM A Y  H    EAL+ F  M   GV+P
Sbjct: 394 TLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRP 453

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDE 531
           +  TFI  L AC  A    +  S   K +  L    GL          +++  + G L +
Sbjct: 454 SVATFITALTAC--AAYPPQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLAD 511

Query: 532 AHEMIKSM-PLRPNMIVWGALLAASKLH 558
           A  + + + P R + I W ++LAA   H
Sbjct: 512 ARAVFERISPARRDCITWNSMLAAYGHH 539


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 190/558 (34%), Positives = 303/558 (54%), Gaps = 42/558 (7%)

Query: 107 YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM 166
           Y  N L+  YS+   L     +F  MP RD+VSW+++I  Y   G   ++++    M + 
Sbjct: 76  YSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYN 135

Query: 167 -DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSK 221
                + +A+ +M+ L +    V LG  +H  VV      K G    V + + L+DMYSK
Sbjct: 136 GPFNLNRIALSTMLILASKQGCVHLGLQVHGHVV------KFGFQSYVFVGSPLVDMYSK 189

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN------------------------ 257
            G +  A+Q F+ + + +VV +  +I+G +RC+ I                         
Sbjct: 190 TGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGF 249

Query: 258 -------EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
                  E + LF EM  EN+   + T  S++  CG V  LQ GK +HAYI+R  ++ ++
Sbjct: 250 TQNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNI 309

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
            + +ALVDMY KC+ I+SA T+F  M  K+V+ W A++  Y Q    ++A ++F  M+ +
Sbjct: 310 FVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNN 369

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
            + P++ T+  ++S C    +LE G   H      GL   + +  ALV +Y KCG +  +
Sbjct: 370 GIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDS 429

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
           +RLFSE  Y D   W A+++GY   G   E L  F  M   G KP+ +TFIG+L+ACS A
Sbjct: 430 HRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRA 489

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           GLV +G  +F+ M+    ++P  +HY CM+DL  RAG L+EA + I  MP  P+ I W +
Sbjct: 490 GLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWAS 549

Query: 551 LLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRV 610
           LL++ + H+N  +G+ AA  +L++EP N    +L+S+IYA   +W +VA +R+ M++  +
Sbjct: 550 LLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGL 609

Query: 611 KKEPGFSSVEVNGLVHKF 628
           +KEPG S ++    VH F
Sbjct: 610 RKEPGCSWIKYKNQVHIF 627


>gi|224065397|ref|XP_002301797.1| predicted protein [Populus trichocarpa]
 gi|222843523|gb|EEE81070.1| predicted protein [Populus trichocarpa]
          Length = 602

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 184/542 (33%), Positives = 313/542 (57%), Gaps = 9/542 (1%)

Query: 92  EIHGFAIKNGLD-GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           +IH   I  GL   ++  +  +I  Y+  G + SAR+LFD++P R V +W+ MI  Y R 
Sbjct: 25  QIHALIITTGLFFANSNFNGLVIASYARIGGITSARHLFDKLPQRGVDAWNAMIVAYSRR 84

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG-- 208
               E L +  +M     +P        +   + + D++ G+ I     R   D   G  
Sbjct: 85  YHLTEVLNLYHQMVNEGGKPDSSTFTVAIKASSSLKDLEAGERIW----RRAVDFGYGCD 140

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V + ++++++Y KCG +  AK +F+++ +  VV W  MI+G ++   + E V +F  M +
Sbjct: 141 VFVGSSVLNLYVKCGKIDEAKLVFDKMVKRDVVCWATMITGLVQNGNVLEAVDMFRRMRK 200

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS-LAMANALVDMYGKCREIR 327
           E +    + +L L+  C  +G L+LG  +H + +R       + +  +LVDMY K  ++ 
Sbjct: 201 EGIEGDGVLMLGLVQACANLGELKLGLSVHGHAVRREMLMDDVILQTSLVDMYAKIGDLE 260

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            A  +F+ M  K+ + W A+IS +AQ    + A +L + M+  + +P+   +V  L  C+
Sbjct: 261 LASRVFEQMPRKNAVSWGALISGFAQNGFAEYALDLLVEMQSLEFKPDTAVLVSALLACS 320

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
           + G L++GK +H YI ++ L  +++L TAL+DMYAKCG ++ A+ +F     RD+ +WN 
Sbjct: 321 QVGHLKLGKSIHGYIVRR-LGFELVLGTALIDMYAKCGSLSCAHAIFDRVDSRDVILWNT 379

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           M+A YG+HG G+E L  F+ M+ + + P+  TF  LL+A SH+G V  G+  F+ MV+  
Sbjct: 380 MIASYGIHGDGKEVLSLFLKMKEANISPDHATFASLLSALSHSGQVDVGQYWFNAMVNEC 439

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
            + P  +HY CMVDL  RAG ++EA+++I+SM   P + +W ALL+    ++N   GE+A
Sbjct: 440 KIPPSEKHYACMVDLFSRAGRVEEAYQLIESMNTEPGLAIWVALLSGCHNYRNLLFGEVA 499

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHK 627
           A +IL++ P + G   L+SN +++A  W+ V+ +R++MKE  +KK PG+S+VEVNG    
Sbjct: 500 AKKILDLNPDDLGIYALVSNFFSLARMWDRVSILRKIMKETGMKKVPGYSAVEVNGKHEA 559

Query: 628 FI 629
           F+
Sbjct: 560 FL 561



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 226/418 (54%), Gaps = 10/418 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++ +Y +    +  LN+Y  M   G + D+ T    +KA + +     G+ I   A+
Sbjct: 74  WNAMIVAYSRRYHLTEVLNLYHQMVNEGGKPDSSTFTVAIKASSSLKDLEAGERIWRRAV 133

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G   D +V ++++ +Y +CG +  A+ +FD+M  RDVV W+TMI G  + G   EA++
Sbjct: 134 DFGYGCDVFVGSSVLNLYVKCGKIDEAKLVFDKMVKRDVVCWATMITGLVQNGNVLEAVD 193

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL--GVAIATALI 216
           + R MR   I    V M+ +V   A++ ++ LG ++H   VR    E L   V + T+L+
Sbjct: 194 MFRRMRKEGIEGDGVLMLGLVQACANLGELKLGLSVHGHAVRR---EMLMDDVILQTSLV 250

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           DMY+K G+L  A ++F ++ + + VSW  +ISG+ +       + L  EM      P   
Sbjct: 251 DMYAKIGDLELASRVFEQMPRKNAVSWGALISGFAQNGFAEYALDLLVEMQSLEFKPDTA 310

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            ++S ++ C  VG L+LGK +H YI+R  GFE  L +  AL+DMY KC  +  A  +FD 
Sbjct: 311 VLVSALLACSQVGHLKLGKSIHGYIVRRLGFE--LVLGTALIDMYAKCGSLSCAHAIFDR 368

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           + S+DV++WN +I++Y       +   LF+ MK + + P+  T   LLS  + +G +++G
Sbjct: 369 VDSRDVILWNTMIASYGIHGDGKEVLSLFLKMKEANISPDHATFASLLSALSHSGQVDVG 428

Query: 396 K-WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAG 451
           + W +  + +  +         +VD++++ G V  AY+L  S      + +W A+++G
Sbjct: 429 QYWFNAMVNECKIPPSEKHYACMVDLFSRAGRVEEAYQLIESMNTEPGLAIWVALLSG 486


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 191/591 (32%), Positives = 317/591 (53%), Gaps = 3/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+  +Y +N     +  I++ MR+   EV++ T+ T+L     V     G+ IHG  +
Sbjct: 319 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 378

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G D    V N L++MY+  G  V A  +F +MP +D++SW++++  +   G   +AL 
Sbjct: 379 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 438

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++  M       + V   S ++        + G+ +H  VV           I  AL+ M
Sbjct: 439 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV--VSGLFYNQIIGNALVSM 496

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y K G ++ ++++  ++ +  VV+W  +I GY    + ++ +  F  M  E V  + IT+
Sbjct: 497 YGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 556

Query: 279 LSLIIECGFVGGL-QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           +S++  C   G L + GK LHAYI+  GFE    + N+L+ MY KC ++ S++ LF+G+ 
Sbjct: 557 VSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 616

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           +++++ WNA+++A A     ++  +L   M+   V  ++ +    LS   +   LE G+ 
Sbjct: 617 NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 676

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH    K G E D  +  A  DMY+KCG++    ++   ++ R +  WN +++  G HG 
Sbjct: 677 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 736

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            EE    F +M   G+KP  +TF+ LL ACSH GLV +G + +D +    GL P IEH  
Sbjct: 737 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 796

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           C++DLLGR+G L EA   I  MP++PN +VW +LLA+ K+H N   G  AA  + ++EP+
Sbjct: 797 CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 856

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           +    VL SN++A   RW DV  VR+ M    +KK+   S V++   V  F
Sbjct: 857 DDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSF 907



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/522 (27%), Positives = 254/522 (48%), Gaps = 31/522 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV-LMTHLGKEIHGFA 97
           +N++++  ++       +  +  M   G +  +F I +++ AC +   M   G ++HGF 
Sbjct: 141 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 200

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
            K+GL  D YVS A++ +Y   G +  +R +F+EMP+R+VVSW++++ GY   G PEE +
Sbjct: 201 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 260

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           ++ +                         D  LG+ I   VV++  + KL  A+  +LI 
Sbjct: 261 DIYK-------------------------DESLGRQIIGQVVKSGLESKL--AVENSLIS 293

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           M    GN+ YA  +F+++++   +SW  + + Y +   I E  R+F+ M   +   +  T
Sbjct: 294 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 353

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           + +L+   G V   + G+ +H  +++ GF+  + + N L+ MY        A  +F  M 
Sbjct: 354 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 413

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           +KD++ WN++++++        A  L   M  S    N VT    L+ C      E G+ 
Sbjct: 414 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 473

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH  +   GL  + I+  ALV MY K G+++ + R+  +   RD+  WNA++ GY     
Sbjct: 474 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 533

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAG-LVTEGKSVFDKMVHGLGLVPKIEHY 516
            ++AL  F  M   GV  N IT + +L+AC   G L+  GK +   +V   G        
Sbjct: 534 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVK 592

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             ++ +  + G L  + ++   +  R N+I W A+LAA+  H
Sbjct: 593 NSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHH 633



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/514 (26%), Positives = 247/514 (48%), Gaps = 39/514 (7%)

Query: 82  AQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWS 141
           +Q+ +   G+ +H   +K  +      +N LI MY++ G +  AR+LFD MP R+ VSW+
Sbjct: 83  SQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWN 142

Query: 142 TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV-DLGKAIHACVVR 200
           TM+ G  R GL  E +E  R+M  + I+PS   + S+V+       +   G  +H  V +
Sbjct: 143 TMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAK 202

Query: 201 NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
           +       V ++TA++ +Y   G ++ ++++F  +   +VVSWT ++ GY    E  E +
Sbjct: 203 SGLLSD--VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 260

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
            ++ +                           LG+ +   ++++G E  LA+ N+L+ M 
Sbjct: 261 DIYKDE-------------------------SLGRQIIGQVVKSGLESKLAVENSLISML 295

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
           G    +  A  +FD M  +D + WN++ +AYAQ   I+++F +F  M+      N  T+ 
Sbjct: 296 GSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVS 355

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
            LLS+       + G+ +H  + K G +  V +   L+ MYA  G    A  +F +   +
Sbjct: 356 TLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK 415

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           D+  WN++MA +   G   +AL     M  SG   N +TF   L AC       +G    
Sbjct: 416 DLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKG---- 471

Query: 501 DKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
            +++HGL +V  + +       +V + G+ G + E+  ++  MP R +++ W AL+    
Sbjct: 472 -RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGGYA 529

Query: 557 LHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYA 590
             ++P    +AA Q + +E  +  Y  ++S + A
Sbjct: 530 EDEDPDKA-LAAFQTMRVEGVSSNYITVVSVLSA 562



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 209/426 (49%), Gaps = 9/426 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NSL+ S++ + +   AL +   M  +G  V+  T  + L AC        G+ +HG
Sbjct: 417 LISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHG 476

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             + +GL  +  + NAL+ MY + G +  +R +  +MP RDVV+W+ +I GY     P++
Sbjct: 477 LVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDK 536

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVAD-VDLGKAIHACVVRNC--KDEKLGVAIA 212
           AL   + MR   +  + + ++S++S      D ++ GK +HA +V      DE     + 
Sbjct: 537 ALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH----VK 592

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            +LI MY+KCG+L+ ++ LFN L+  ++++W  M++         E ++L ++M    V 
Sbjct: 593 NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 652

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
             + +    +     +  L+ G+ LH   ++ GFE    + NA  DMY KC EI     +
Sbjct: 653 LDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM 712

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
                ++ +  WN +ISA  +    ++    F  M    ++P  VT V LL+ C+  G +
Sbjct: 713 LPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLV 772

Query: 393 EMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMA 450
           + G   +  I +  GLE  +     ++D+  + G +  A    S+   + +  +W +++A
Sbjct: 773 DKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLA 832

Query: 451 GYGMHG 456
              +HG
Sbjct: 833 SCKIHG 838


>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Cucumis sativus]
          Length = 614

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 190/497 (38%), Positives = 285/497 (57%), Gaps = 6/497 (1%)

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
             W+T +R   +     +AL +  +M     RP+       +   A ++   LG   H  
Sbjct: 6   TPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQ 65

Query: 198 VVR-NCKDEKLGVAIATALIDMYSKCGNLAYAKQLF--NRLNQNSVVSWTVMISGYIRCN 254
           + +  C  E     + T LI MY K   +  A+++F  N  ++   V +  ++SGY+  +
Sbjct: 66  ITKVGCVFEPF---VQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNS 122

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
           + ++ V LF +M EE V  + +T+L LI  C     L+LG  LH   L+ GF+  +++ N
Sbjct: 123 KCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVN 182

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
             + MY KC  +  A+ LFD M  K ++ WNA++S YAQ        EL+ +M ++ V P
Sbjct: 183 CFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHP 242

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           + VT+VG+LS C   GA  +G  +   ++  G   +  L  AL++MYA+CG++  A  +F
Sbjct: 243 DPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVF 302

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
                R +  W A++ GYGMHG GE A+  F +M RSG++P+G  F+ +L+ACSHAGL  
Sbjct: 303 DGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 362

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +G   F  M     L P  EHY CMVDLLGRAG L EA  +I+SMP++P+  VWGALL A
Sbjct: 363 QGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 422

Query: 555 SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEP 614
            K+HKN  + E+A  +++E+EP+N GY VL+SNIY+ AN    V  +R +MKE ++KK+P
Sbjct: 423 CKIHKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDP 482

Query: 615 GFSSVEVNGLVHKFIRG 631
           G S VE+ G VH FI G
Sbjct: 483 GCSYVELKGRVHPFIVG 499



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 212/434 (48%), Gaps = 8/434 (1%)

Query: 37  TRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGF 96
           T +N+ +    K  +   AL++Y  M ++G   + FT P  LK+CA + +  LG + HG 
Sbjct: 6   TPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGSQFHGQ 65

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLV-SARYLFDE--MPNRDVVSWSTMIRGYHRGGLP 153
             K G   + +V   LI MY + GSLV +AR +F+E     +  V ++ ++ GY      
Sbjct: 66  ITKVGCVFEPFVQTGLISMYCK-GSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKC 124

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            +A+ + R+M    +  + V ++ ++       +++LG ++H   ++   D    V++  
Sbjct: 125 SDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSD--VSVVN 182

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
             I MY KCG++ YA++LF+ +    ++SW  M+SGY +       + L+  M    V P
Sbjct: 183 CFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHP 242

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
             +T++ ++  C  +G   +G  +   +  +GF  +  + NAL++MY +C  +  A+ +F
Sbjct: 243 DPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVF 302

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           DGM  + ++ W A+I  Y      + A +LF  M  S + P+    V +LS C+ AG  +
Sbjct: 303 DGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTD 362

Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAG 451
            G ++         LE      + +VD+  + G +  A  L  S  I  D  +W A++  
Sbjct: 363 QGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGA 422

Query: 452 YGMHGCGEEALIFF 465
             +H   E A + F
Sbjct: 423 CKIHKNVELAELAF 436



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 172/343 (50%), Gaps = 15/343 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+LV+ Y+ N+K S A+ ++  M + G  V++ T+  ++ AC   +   LG  +H   +
Sbjct: 111 YNALVSGYVSNSKCSDAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTL 170

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G D D  V N  I MY +CGS+  A+ LFDEMP + ++SW+ M+ GY + GL    LE
Sbjct: 171 KYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLE 230

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATA 214
           + R M    + P  V ++ ++S  A++    +G  +        K +  G      +  A
Sbjct: 231 LYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEF------KMQASGFTSNPFLNNA 284

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           LI+MY++CGNL  A+ +F+ + + ++VSWT +I GY         V+LF EMI   + P 
Sbjct: 285 LINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPD 344

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLF 333
               + ++  C   G    G      + RN   E      + +VD+ G+   ++ A+TL 
Sbjct: 345 GTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLI 404

Query: 334 DGMKSK-DVMIWNAVISA---YAQAHCIDKAFELFIHMKVSKV 372
           + M  K D  +W A++ A   +      + AFE  I ++   +
Sbjct: 405 ESMPIKPDGAVWGALLGACKIHKNVELAELAFERVIELEPENI 447



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 1/200 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N++V+ Y +N   ++ L +Y  M  NG   D  T+  +L +CA +    +G E+  
Sbjct: 209 LISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEF 268

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
               +G   + +++NALI MY+ CG+L  A+ +FD MP R +VSW+ +I GY   G  E 
Sbjct: 269 KMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEI 328

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+++ +EM    I P   A + ++S  +     D G      + RN + E  G    + +
Sbjct: 329 AVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEP-GPEHYSCM 387

Query: 216 IDMYSKCGNLAYAKQLFNRL 235
           +D+  + G L  A+ L   +
Sbjct: 388 VDLLGRAGRLKEAQTLIESM 407


>gi|15228265|ref|NP_190368.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207726|sp|Q9STS9.1|PP268_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g47840
 gi|4741201|emb|CAB41867.1| putative protein [Arabidopsis thaliana]
 gi|332644818|gb|AEE78339.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 706

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 195/599 (32%), Positives = 314/599 (52%), Gaps = 6/599 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMR--KNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           +  + S++  Y+  N    AL +++ MR   +    D   +  +LKAC Q      G+ +
Sbjct: 71  IVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESL 130

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           H +A+K  L    YV ++L+ MY   G +  +  +F EMP R+ V+W+ +I G    G  
Sbjct: 131 HAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRY 190

Query: 154 EEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
           +E L    EM R  ++  +    I++ +  A +  V  GKAIH  V+   +     + +A
Sbjct: 191 KEGLTYFSEMSRSEELSDTYTFAIALKAC-AGLRQVKYGKAIHTHVI--VRGFVTTLCVA 247

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            +L  MY++CG +     LF  +++  VVSWT +I  Y R  +  + V  F +M    V 
Sbjct: 248 NSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVP 307

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P+E T  S+   C  +  L  G+ LH  +L  G   SL+++N+++ MY  C  + SA  L
Sbjct: 308 PNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVL 367

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F GM+ +D++ W+ +I  Y QA   ++ F+ F  M+ S  +P +  +  LLS+      +
Sbjct: 368 FQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVI 427

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           E G+ +H      GLE +  ++++L++MY+KCG +  A  +F E    DI    AM+ GY
Sbjct: 428 EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGY 487

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             HG  +EA+  F    + G +P+ +TFI +L AC+H+G +  G   F+ M     + P 
Sbjct: 488 AEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPA 547

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
            EHYGCMVDLL RAG L +A +MI  M  + + +VW  LL A K   +   G  AA +IL
Sbjct: 548 KEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERIL 607

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           E++P      V ++NIY+      + A VR+ MK   V KEPG+SS+++   V  F+ G
Sbjct: 608 ELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSG 666



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 221/439 (50%), Gaps = 14/439 (3%)

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD--IRPSEVAMIS 177
           G+L +AR +FD+MP+ D+VSW+++I+ Y      +EAL +   MR +D  + P    +  
Sbjct: 54  GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
           ++      +++  G+++HA  V+        V + ++L+DMY + G +  + ++F+ +  
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLS--SVYVGSSLLDMYKRVGKIDKSCRVFSEMPF 171

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
            + V+WT +I+G +      EG+  F+EM          T    +  C  +  ++ GK +
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           H +++  GF  +L +AN+L  MY +C E++    LF+ M  +DV+ W ++I AY +    
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQE 291

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
            KA E FI M+ S+V PNE T   + S C     L  G+ LH  +   GL   + +  ++
Sbjct: 292 VKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSM 351

Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
           + MY+ CG++  A  LF     RDI  W+ ++ GY   G GEE   +F  M +SG KP  
Sbjct: 352 MKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTD 411

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH----YGCMVDLLGRAGLLDEAH 533
                LL+   +  ++  G     + VH L L   +E        ++++  + G + EA 
Sbjct: 412 FALASLLSVSGNMAVIEGG-----RQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA- 465

Query: 534 EMIKSMPLRPNMIVWGALL 552
            MI     R +++   A++
Sbjct: 466 SMIFGETDRDDIVSLTAMI 484


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 191/591 (32%), Positives = 317/591 (53%), Gaps = 3/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+  +Y +N     +  I++ MR+   EV++ T+ T+L     V     G+ IHG  +
Sbjct: 212 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 271

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G D    V N L++MY+  G  V A  +F +MP +D++SW++++  +   G   +AL 
Sbjct: 272 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 331

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++  M       + V   S ++        + G+ +H  VV           I  AL+ M
Sbjct: 332 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV--VSGLFYNQIIGNALVSM 389

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y K G ++ ++++  ++ +  VV+W  +I GY    + ++ +  F  M  E V  + IT+
Sbjct: 390 YGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 449

Query: 279 LSLIIECGFVGGL-QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           +S++  C   G L + GK LHAYI+  GFE    + N+L+ MY KC ++ S++ LF+G+ 
Sbjct: 450 VSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 509

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           +++++ WNA+++A A     ++  +L   M+   V  ++ +    LS   +   LE G+ 
Sbjct: 510 NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 569

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH    K G E D  +  A  DMY+KCG++    ++   ++ R +  WN +++  G HG 
Sbjct: 570 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 629

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            EE    F +M   G+KP  +TF+ LL ACSH GLV +G + +D +    GL P IEH  
Sbjct: 630 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 689

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           C++DLLGR+G L EA   I  MP++PN +VW +LLA+ K+H N   G  AA  + ++EP+
Sbjct: 690 CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 749

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           +    VL SN++A   RW DV  VR+ M    +KK+   S V++   V  F
Sbjct: 750 DDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSF 800



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 265/522 (50%), Gaps = 6/522 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV-LMTHLGKEIHGFA 97
           +N++++  ++       +  +  M   G +  +F I +++ AC +   M   G ++HGF 
Sbjct: 9   WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 68

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
            K+GL  D YVS A++ +Y   G +  +R +F+EMP+R+VVSW++++ GY   G PEE +
Sbjct: 69  AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 128

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           ++ + MR   +  +E +M  ++S    + D  LG+ I   VV++  + KL  A+  +LI 
Sbjct: 129 DIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL--AVENSLIS 186

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           M    GN+ YA  +F+++++   +SW  + + Y +   I E  R+F+ M   +   +  T
Sbjct: 187 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 246

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           + +L+   G V   + G+ +H  +++ GF+  + + N L+ MY        A  +F  M 
Sbjct: 247 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 306

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           +KD++ WN++++++        A  L   M  S    N VT    L+ C      E G+ 
Sbjct: 307 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 366

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH  +   GL  + I+  ALV MY K G+++ + R+  +   RD+  WNA++ GY     
Sbjct: 367 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 426

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAG-LVTEGKSVFDKMVHGLGLVPKIEHY 516
            ++AL  F  M   GV  N IT + +L+AC   G L+  GK +   +V   G        
Sbjct: 427 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVK 485

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             ++ +  + G L  + ++   +  R N+I W A+LAA+  H
Sbjct: 486 NSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHH 526



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 231/464 (49%), Gaps = 14/464 (3%)

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV-DL 190
           MP R+ VSW+TM+ G  R GL  E +E  R+M  + I+PS   + S+V+       +   
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           G  +H  V ++       V ++TA++ +Y   G ++ ++++F  +   +VVSWT ++ GY
Sbjct: 61  GVQVHGFVAKSGLLSD--VYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
               E  E + ++  M  E V  +E ++  +I  CG +    LG+ +   ++++G E  L
Sbjct: 119 SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL 178

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
           A+ N+L+ M G    +  A  +FD M  +D + WN++ +AYAQ   I+++F +F  M+  
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF 238

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
               N  T+  LLS+       + G+ +H  + K G +  V +   L+ MYA  G    A
Sbjct: 239 HDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA 298

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
             +F +   +D+  WN++MA +   G   +AL     M  SG   N +TF   L AC   
Sbjct: 299 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 358

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
               +G     +++HGL +V  + +       +V + G+ G + E+  ++  MP R +++
Sbjct: 359 DFFEKG-----RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVV 412

Query: 547 VWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYA 590
            W AL+      ++P    +AA Q + +E  +  Y  ++S + A
Sbjct: 413 AWNALIGGYAEDEDPDKA-LAAFQTMRVEGVSSNYITVVSVLSA 455



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 209/426 (49%), Gaps = 9/426 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NSL+ S++ + +   AL +   M  +G  V+  T  + L AC        G+ +HG
Sbjct: 310 LISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHG 369

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             + +GL  +  + NAL+ MY + G +  +R +  +MP RDVV+W+ +I GY     P++
Sbjct: 370 LVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDK 429

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVAD-VDLGKAIHACVVRNC--KDEKLGVAIA 212
           AL   + MR   +  + + ++S++S      D ++ GK +HA +V      DE     + 
Sbjct: 430 ALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH----VK 485

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            +LI MY+KCG+L+ ++ LFN L+  ++++W  M++         E ++L ++M    V 
Sbjct: 486 NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 545

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
             + +    +     +  L+ G+ LH   ++ GFE    + NA  DMY KC EI     +
Sbjct: 546 LDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM 605

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
                ++ +  WN +ISA  +    ++    F  M    ++P  VT V LL+ C+  G +
Sbjct: 606 LPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLV 665

Query: 393 EMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMA 450
           + G   +  I +  GLE  +     ++D+  + G +  A    S+   + +  +W +++A
Sbjct: 666 DKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLA 725

Query: 451 GYGMHG 456
              +HG
Sbjct: 726 SCKIHG 731


>gi|115473985|ref|NP_001060591.1| Os07g0670000 [Oryza sativa Japonica Group]
 gi|22831115|dbj|BAC15976.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
 gi|50510078|dbj|BAD30730.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
 gi|113612127|dbj|BAF22505.1| Os07g0670000 [Oryza sativa Japonica Group]
 gi|125559550|gb|EAZ05086.1| hypothetical protein OsI_27276 [Oryza sativa Indica Group]
          Length = 726

 Score =  346 bits (888), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 209/606 (34%), Positives = 326/606 (53%), Gaps = 28/606 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIH 94
           ++ YN++++++     P+ AL+  ++M ++G+   D  T    L   A      L +++H
Sbjct: 98  VSSYNTILSAF---PDPAEALDFASWMLRSGAVRPDAVTCTVALSLAAGRGEGFLVRQLH 154

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG-LP 153
             A ++GL  D +V NAL+  YS  GSL  AR +FD+MP RD+VSW+ +I G  + G  P
Sbjct: 155 ALAWRSGLAADVFVGNALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCP 214

Query: 154 EEALEV-MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV--- 209
            E + V +R +R  D++P  +++ S++        ++LG+ +H   V      KLGV   
Sbjct: 215 AEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAV------KLGVEGY 268

Query: 210 -AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
            +I   L+ MY KCG    A++LF+ +++  VVSWT  IS      +  + + LF  M  
Sbjct: 269 VSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAIS-----MDGEDALTLFNGMRR 323

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
           + V P+E+T ++L+         +  + +HA  L+       A +N+L+ MY K R +  
Sbjct: 324 DGVPPNEVTFVALMSALPADCPARGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDD 383

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT- 387
           AR +FD M  ++++ WNAVIS YAQ    + A ELF  M    + PNE T   +LS  T 
Sbjct: 384 ARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSM-ARCLTPNETTFASVLSAVTA 442

Query: 388 -EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
            E  ++  G+  H+     G      +  AL+DMYAK G++  + + F E   R +  W 
Sbjct: 443 VETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWT 502

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           A+++    HG     +  F DM RSGV P+G+  + +L AC + G+V  G+ +FD M   
Sbjct: 503 AIISANARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDIFDSMAAD 562

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
            G+    EHY C+VD+LGRAG L EA E++  MP  P++    +LL A ++H +  +GE 
Sbjct: 563 RGVELWPEHYSCVVDMLGRAGRLAEAEELMMRMPAGPSVSALQSLLGACRIHGDAEIGER 622

Query: 567 AATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG--- 623
            A  + E EP   G  VL+SNIYA    W+ VA VRR M++  VKKE GFS V+      
Sbjct: 623 IARILTEKEPTESGAYVLLSNIYADVGDWDGVAKVRRKMRDRGVKKEIGFSWVDAGAGEA 682

Query: 624 -LVHKF 628
             +HKF
Sbjct: 683 LHLHKF 688



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 231/473 (48%), Gaps = 22/473 (4%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H  A+  GL G A V+N+L   Y++ GS  SA  +F     RDV S++T++  +     
Sbjct: 54  LHAVAVTTGLHGFAAVTNSLAARYAKTGSFPSAVGVFAAARARDVSSYNTILSAFPD--- 110

Query: 153 PEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
           P EAL+    M R   +RP  V     +SL A   +  L + +HA   R+       V +
Sbjct: 111 PAEALDFASWMLRSGAVRPDAVTCTVALSLAAGRGEGFLVRQLHALAWRSGLAAD--VFV 168

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-EGVRLFAEMIEE- 269
             AL+  YS+ G+L  A+ +F+ +    +VSW  +I G  +  +   E + +F  M+ + 
Sbjct: 169 GNALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDG 228

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
           +V P  I++ S+I  CG  G L+LG+ +H + ++ G E  +++ N LV MY KC    SA
Sbjct: 229 DVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSA 288

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           R LFD M  +DV+ W   IS   +      A  LF  M+   V PNEVT V L+S     
Sbjct: 289 RRLFDAMSERDVVSWTTAISMDGE-----DALTLFNGMRRDGVPPNEVTFVALMSALPAD 343

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
                 + +H    K  +  +     +L+ MYAK   ++ A  +F     R+I  WNA++
Sbjct: 344 CPARGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVI 403

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH---- 505
           +GY  +G   +AL  F  M R  + PN  TF  +L+A +    V+     + +M H    
Sbjct: 404 SGYAQNGRCNDALELFSSMARC-LTPNETTFASVLSAVTAVETVS---MAYGQMYHSRAL 459

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            +G        G ++D+  + G L+E+ +       R ++I W A+++A+  H
Sbjct: 460 SMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQR-SLIAWTAIISANARH 511


>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 700

 Score =  346 bits (887), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 183/532 (34%), Positives = 304/532 (57%), Gaps = 15/532 (2%)

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
           N+LI +Y +C  L  ARYLFDEM  R VVS++ ++ GY   G   E +++ + M     +
Sbjct: 59  NSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQ 118

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNL 225
           P+E    +++S  A    V  G   H  +       K G+     + ++L+ MYSKC ++
Sbjct: 119 PNEYVFTTVLSACAHSGRVFEGMQCHGFLF------KFGLVFHHFVKSSLVHMYSKCFHV 172

Query: 226 AYAKQLF-----NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
             A Q+      N  N N    +  +++  +    + E V +   M++E V    +T +S
Sbjct: 173 DLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVS 232

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           ++  CG +  L LG  +HA +L+ G  F + + + LVDM+GKC ++ SAR +FDG+++++
Sbjct: 233 VMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRN 292

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           V++W ++++AY Q    ++   L   M       NE T   LL+      AL  G  LH 
Sbjct: 293 VVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHA 352

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
            +EK G++  VI+  AL++MY+KCG ++ +Y +F +   RDI  WNAM+ GY  HG G++
Sbjct: 353 RVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQ 412

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           AL+ F DM  +G  PN +TF+G+L+AC+H  LV EG    ++++    + P +EHY C+V
Sbjct: 413 ALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVV 472

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYG 580
            +L RAG+L+EA   +++  ++ +++ W  LL A  +H+N ++G   A  IL+++P++ G
Sbjct: 473 AVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMG 532

Query: 581 YNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
              L+SN+YA A  W+ V  +R++M+E  VKKEPG S +E+   VH F   G
Sbjct: 533 TYTLLSNMYAKARSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDG 584



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 190/387 (49%), Gaps = 13/387 (3%)

Query: 183 ADVADVDLGKAIHA-CVVRNCKD-----EKLGVAIATALIDMYSKCGNLAYAKQLFNRLN 236
           A+  +++ GK+IH   ++RN         +  +    +LI++Y KC  L  A+ LF+ ++
Sbjct: 23  ANTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEMS 82

Query: 237 QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
             SVVS+ V++ GY+   E  E V+LF  M+     P+E    +++  C   G +  G  
Sbjct: 83  LRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQ 142

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM-----KSKDVMIWNAVISAY 351
            H ++ + G  F   + ++LV MY KC  +  A  + +          D   +N+V++A 
Sbjct: 143 CHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNAL 202

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
            ++  + +A E+   M    V  + VT V ++ LC +   L +G  +H  + K GL  DV
Sbjct: 203 VESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDV 262

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
            + + LVDM+ KCGDV  A ++F     R++ +W ++M  Y  +G  EE L     M+R 
Sbjct: 263 FVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDRE 322

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
           G   N  TF  LLNA +    +  G  +    V  LG+  ++     ++++  + G +D 
Sbjct: 323 GTMSNEFTFAVLLNAFAGMAALRHG-DLLHARVEKLGIKNRVIVGNALINMYSKCGCIDS 381

Query: 532 AHEMIKSMPLRPNMIVWGALLAASKLH 558
           ++++   M  R ++I W A++     H
Sbjct: 382 SYDVFFDMRNR-DIITWNAMICGYSQH 407



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 210/430 (48%), Gaps = 9/430 (2%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  YN L+  Y+ + +    + ++  M  +  + + +   T+L ACA       G +
Sbjct: 83  LRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQ 142

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSL-VSARYLFDEMPN----RDVVSWSTMIRGY 147
            HGF  K GL    +V ++L+ MYS+C  + ++ + L  E  N     D   +++++   
Sbjct: 143 CHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNAL 202

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
              G   EA+EV+  M    +    V  +S++ L   + D+ LG  +HA +++       
Sbjct: 203 VESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKG--GLTF 260

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            V + + L+DM+ KCG++  A+++F+ L   +VV WT +++ Y++  E  E + L + M 
Sbjct: 261 DVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMD 320

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
            E    +E T   L+     +  L+ G  LHA + + G +  + + NAL++MY KC  I 
Sbjct: 321 REGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCID 380

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           S+  +F  M+++D++ WNA+I  Y+Q     +A  LF  M  +   PN VT VG+LS C 
Sbjct: 381 SSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLSACA 440

Query: 388 EAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMW 445
               +  G  +L+  ++   +E  +   T +V +  + G +  A     +  +  D+  W
Sbjct: 441 HLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDVVAW 500

Query: 446 NAMMAGYGMH 455
             ++    +H
Sbjct: 501 RVLLNACNIH 510


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  346 bits (887), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 191/591 (32%), Positives = 317/591 (53%), Gaps = 3/591 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+  +Y +N     +  I++ MR+   EV++ T+ T+L     V     G+ IHG  +
Sbjct: 229 WNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV 288

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G D    V N L++MY+  G  V A  +F +MP +D++SW++++  +   G   +AL 
Sbjct: 289 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 348

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++  M       + V   S ++        + G+ +H  VV           I  AL+ M
Sbjct: 349 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV--VSGLFYNQIIGNALVSM 406

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y K G ++ ++++  ++ +  VV+W  +I GY    + ++ +  F  M  E V  + IT+
Sbjct: 407 YGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITV 466

Query: 279 LSLIIECGFVGGL-QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           +S++  C   G L + GK LHAYI+  GFE    + N+L+ MY KC ++ S++ LF+G+ 
Sbjct: 467 VSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD 526

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           +++++ WNA+++A A     ++  +L   M+   V  ++ +    LS   +   LE G+ 
Sbjct: 527 NRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQ 586

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH    K G E D  +  A  DMY+KCG++    ++   ++ R +  WN +++  G HG 
Sbjct: 587 LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGY 646

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            EE    F +M   G+KP  +TF+ LL ACSH GLV +G + +D +    GL P IEH  
Sbjct: 647 FEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCI 706

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           C++DLLGR+G L EA   I  MP++PN +VW +LLA+ K+H N   G  AA  + ++EP+
Sbjct: 707 CVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPE 766

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           +    VL SN++A   RW DV  VR+ M    +KK+   S V++   V  F
Sbjct: 767 DDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSF 817



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 265/522 (50%), Gaps = 6/522 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV-LMTHLGKEIHGFA 97
           +N++++  ++       +  +  M   G +  +F I +++ AC +   M   G ++HGF 
Sbjct: 26  WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 85

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
            K+GL  D YVS A++ +Y   G +  +R +F+EMP+R+VVSW++++ GY   G PEE +
Sbjct: 86  AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 145

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           ++ + MR   +  +E +M  ++S    + D  LG+ I   VV++  + KL  A+  +LI 
Sbjct: 146 DIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKL--AVENSLIS 203

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           M    GN+ YA  +F+++++   +SW  + + Y +   I E  R+F+ M   +   +  T
Sbjct: 204 MLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTT 263

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           + +L+   G V   + G+ +H  +++ GF+  + + N L+ MY        A  +F  M 
Sbjct: 264 VSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP 323

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           +KD++ WN++++++        A  L   M  S    N VT    L+ C      E G+ 
Sbjct: 324 TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRI 383

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH  +   GL  + I+  ALV MY K G+++ + R+  +   RD+  WNA++ GY     
Sbjct: 384 LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDED 443

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAG-LVTEGKSVFDKMVHGLGLVPKIEHY 516
            ++AL  F  M   GV  N IT + +L+AC   G L+  GK +   +V   G        
Sbjct: 444 PDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA-GFESDEHVK 502

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             ++ +  + G L  + ++   +  R N+I W A+LAA+  H
Sbjct: 503 NSLITMYAKCGDLSSSQDLFNGLDNR-NIITWNAMLAANAHH 543



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/481 (28%), Positives = 243/481 (50%), Gaps = 14/481 (2%)

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           MY++ G +  AR+LFD MP R+ VSW+TM+ G  R GL  E +E  R+M  + I+PS   
Sbjct: 1   MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60

Query: 175 MISMVSLFADVADV-DLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFN 233
           + S+V+       +   G  +H  V ++       V ++TA++ +Y   G ++ ++++F 
Sbjct: 61  IASLVTACGRSGSMFREGVQVHGFVAKSGLLSD--VYVSTAILHLYGVYGLVSCSRKVFE 118

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL 293
            +   +VVSWT ++ GY    E  E + ++  M  E V  +E ++  +I  CG +    L
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           G+ +   ++++G E  LA+ N+L+ M G    +  A  +FD M  +D + WN++ +AYAQ
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
              I+++F +F  M+      N  T+  LLS+       + G+ +H  + K G +  V +
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
              L+ MYA  G    A  +F +   +D+  WN++MA +   G   +AL     M  SG 
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLL 529
             N +TF   L AC       +G     +++HGL +V  + +       +V + G+ G +
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKG-----RILHGLVVVSGLFYNQIIGNALVSMYGKIGEM 413

Query: 530 DEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIY 589
            E+  ++  MP R +++ W AL+      ++P    +AA Q + +E  +  Y  ++S + 
Sbjct: 414 SESRRVLLQMP-RRDVVAWNALIGGYAEDEDPDKA-LAAFQTMRVEGVSSNYITVVSVLS 471

Query: 590 A 590
           A
Sbjct: 472 A 472



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 209/426 (49%), Gaps = 9/426 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NSL+ S++ + +   AL +   M  +G  V+  T  + L AC        G+ +HG
Sbjct: 327 LISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHG 386

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             + +GL  +  + NAL+ MY + G +  +R +  +MP RDVV+W+ +I GY     P++
Sbjct: 387 LVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDK 446

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVAD-VDLGKAIHACVVRNC--KDEKLGVAIA 212
           AL   + MR   +  + + ++S++S      D ++ GK +HA +V      DE     + 
Sbjct: 447 ALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEH----VK 502

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            +LI MY+KCG+L+ ++ LFN L+  ++++W  M++         E ++L ++M    V 
Sbjct: 503 NSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVS 562

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
             + +    +     +  L+ G+ LH   ++ GFE    + NA  DMY KC EI     +
Sbjct: 563 LDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM 622

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
                ++ +  WN +ISA  +    ++    F  M    ++P  VT V LL+ C+  G +
Sbjct: 623 LPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLV 682

Query: 393 EMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMA 450
           + G   +  I +  GLE  +     ++D+  + G +  A    S+   + +  +W +++A
Sbjct: 683 DKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLA 742

Query: 451 GYGMHG 456
              +HG
Sbjct: 743 SCKIHG 748


>gi|242032375|ref|XP_002463582.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
 gi|241917436|gb|EER90580.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
          Length = 610

 Score =  346 bits (887), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 185/508 (36%), Positives = 288/508 (56%), Gaps = 6/508 (1%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           T   +LK CA       G+ +H      GL  ++  + AL  MY +C   V AR +FD M
Sbjct: 61  TFTALLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARRVFDRM 120

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD--IRPSEVAMISMVSLFADVADVDL 190
           P RD V+W+ ++ GY R GLP  A+E +  M+  +   +P  + ++S++   AD   +  
Sbjct: 121 PARDRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADARVLGA 180

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
            + +HA  +R   DE   V ++TA++D Y KCG +  A+ +F+ +   + VSW  MI GY
Sbjct: 181 CREVHAFALRAGLDEL--VNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMIDGY 238

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
                 +E + LF  M++E V  ++  +L+ +  C  +G L   + +H  ++R G + ++
Sbjct: 239 AENGNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGLKSNV 298

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMI-WNAVISAYAQAHCIDKAFELFIHMKV 369
           ++ NAL+  Y KC+    A   F+ +  K   I WNA+I  + Q  C + A  LF  M++
Sbjct: 299 SVMNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLFARMQL 358

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
             V+P+  T+V ++    +       +W+H Y  +  L+ D+ + TAL+DMY+KCG V  
Sbjct: 359 ENVKPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMYSKCGRVTI 418

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A +LF  A  R +  WNAM+ GYG HG G+ A+  F +M+ +G  PN  TF+ +L ACSH
Sbjct: 419 ARKLFDSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLAACSH 478

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           AGLV EG+  F  M    GL P +EHYG +VDLLGRAG +DEA   I++MP+ P + V+G
Sbjct: 479 AGLVDEGRKYFASM-KDYGLEPGMEHYGTLVDLLGRAGKVDEAWSFIQNMPIEPGISVYG 537

Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQ 577
           A+L A KLHKN  + E +A +I E+ P+
Sbjct: 538 AMLGACKLHKNVELAEESAQKIFELGPE 565



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 150/484 (30%), Positives = 242/484 (50%), Gaps = 16/484 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMR--KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGF 96
           +N+LV  Y +N  P+ A+     M+  + G + D+ T+ ++L ACA   +    +E+H F
Sbjct: 128 WNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADARVLGACREVHAF 187

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
           A++ GLD    VS A++  Y +CG++ +AR +FD MP R+ VSW+ MI GY   G   EA
Sbjct: 188 ALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMIDGYAENGNASEA 247

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           L +   M    +  ++ A+++ +    ++  +D  + +H  +VR     K  V++  ALI
Sbjct: 248 LALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVR--VGLKSNVSVMNALI 305

Query: 217 DMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIR--CNEINEGVRLFAEMIEENVFP 273
             YSKC     A   FN L  + + +SW  MI G+ +  C+E  E  RLFA M  ENV P
Sbjct: 306 TTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAE--RLFARMQLENVKP 363

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T++S+I     +      +W+H Y +R+  +  + +  AL+DMY KC  +  AR LF
Sbjct: 364 DSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMYSKCGRVTIARKLF 423

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           D  + + V+ WNA+I  Y        A ELF  MK +   PNE T + +L+ C+ AG ++
Sbjct: 424 DSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVD 483

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGY 452
            G+     ++  GLE  +     LVD+  + G V+ A+       I   I ++ AM+   
Sbjct: 484 EGRKYFASMKDYGLEPGMEHYGTLVDLLGRAGKVDEAWSFIQNMPIEPGISVYGAMLGAC 543

Query: 453 GMHG---CGEEAL--IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
            +H      EE+   IF +  E   +       +  L  C   G   + K ++D M H  
Sbjct: 544 KLHKNVELAEESAQKIFELGPEEGSLSQTMNASMEELARCPGIG-EQKVKCLYDSMSHSN 602

Query: 508 GLVP 511
           G +P
Sbjct: 603 GFLP 606



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 87/182 (47%), Gaps = 4/182 (2%)

Query: 373 RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYR 432
           RP   T   LL LC     L  G+ +H  +  +GL  + +  TAL +MY KC     A R
Sbjct: 56  RPVLRTFTALLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARR 115

Query: 433 LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM--ERSGVKPNGITFIGLLNACSHA 490
           +F     RD   WNA++AGY  +G    A+   V M  E  G +P+ IT + +L AC+ A
Sbjct: 116 VFDRMPARDRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADA 175

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
            ++   + V    +   GL   +     ++D   + G ++ A  +   MP+R N + W A
Sbjct: 176 RVLGACREVHAFALRA-GLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVR-NSVSWNA 233

Query: 551 LL 552
           ++
Sbjct: 234 MI 235


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  346 bits (887), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 198/618 (32%), Positives = 325/618 (52%), Gaps = 17/618 (2%)

Query: 29  YTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH 88
           +  +   L  +N+ + +  ++     AL ++  M+  G      T+   L  CA +    
Sbjct: 186 FEKMERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCATIRQA- 244

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
             + IH    ++GL+    VS AL   Y+  G L  A+ +FD    RDVVSW+ M+  Y 
Sbjct: 245 --QAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYA 302

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           + G   EA  +   M    I PS+V   ++V+     + +  G+ IH C +    D    
Sbjct: 303 QHGHMSEAALLFARMLHEGISPSKV---TLVNASTGCSSLRFGRMIHGCALEKGLDRD-- 357

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           + +  AL+DMY++CG+   A+ LF R+  N+V SW  MI+G  +  ++   V LF  M  
Sbjct: 358 IVLGNALLDMYTRCGSPEEARHLFKRIPCNAV-SWNTMIAGSSQKGQMKRAVELFQRMQL 416

Query: 269 ENVFPSEITILSLIIECGF----VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           E + P   T L+L+            +  G+ LH+ I+  G+    A+  A+V MY  C 
Sbjct: 417 EGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCG 476

Query: 325 EIRSARTLFD--GMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
            I  A   F    M+ + DV+ WNA+IS+ +Q     +A   F  M +  V PN++T V 
Sbjct: 477 AIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVA 536

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYR 440
           +L  C  A AL  G+ +H ++   G+E ++ + TAL  MY +CG +  A  +F + A+ R
Sbjct: 537 VLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVER 596

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           D+ ++NAM+A Y  +G   EAL  F  M++ G +P+  +F+ +L+ACSH GL  EG  +F
Sbjct: 597 DVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIF 656

Query: 501 DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
             M    G+ P  +HY C VD+LGRAG L +A E+I+ M ++P ++VW  LL A + +++
Sbjct: 657 RSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRD 716

Query: 561 PSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
              G +A + + E++P +    V++SNI A A +W++ A VR  M+   ++KE G S +E
Sbjct: 717 VDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWIE 776

Query: 621 VNGLVHKFIRGGMVNWKS 638
           +   VH+F+ G   + +S
Sbjct: 777 IKSRVHEFVAGDRSHPRS 794



 Score =  275 bits (703), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 159/523 (30%), Positives = 282/523 (53%), Gaps = 18/523 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++T+Y ++ +   A+ ++  M++ G   D  T   +LKACA++     G+ IH + +
Sbjct: 96  WTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIV 155

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++GL G + ++N L+ +Y  CG + SA  LF++M  RD+VSW+  I    + G    ALE
Sbjct: 156 ESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIALE 214

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + + M+   +RP+ + ++  +++ A +      +AIH  V  +  ++ L   ++TAL   
Sbjct: 215 LFQRMQLEGVRPARITLVIALTVCATIRQ---AQAIHFIVRESGLEQTL--VVSTALASA 269

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y++ G+L  AK++F+R  +  VVSW  M+  Y +   ++E   LFA M+ E + PS++T+
Sbjct: 270 YARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTL 329

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           ++    C     L+ G+ +H   L  G +  + + NAL+DMY +C     AR LF  +  
Sbjct: 330 VNASTGC---SSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIPC 386

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT----EAGALEM 394
             V  WN +I+  +Q   + +A ELF  M++  + P   T + LL        EA A+  
Sbjct: 387 NAVS-WNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAE 445

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR---DICMWNAMMAG 451
           G+ LH+ I   G   +  + TA+V MYA CG ++ A   F         D+  WNA+++ 
Sbjct: 446 GRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISS 505

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
              HG G+ AL FF  M+  GV PN IT + +L+AC+ A  +TEG+ V D + H  G+  
Sbjct: 506 LSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHS-GMES 564

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            +     +  + GR G L+ A E+ + + +  +++++ A++AA
Sbjct: 565 NLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 199/391 (50%), Gaps = 24/391 (6%)

Query: 169 RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYA 228
           RP+   ++ ++    D   +  G+ IHA +V    +E+LG      L+ +Y KC +L   
Sbjct: 28  RPAH--LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEELG----NHLLRLYLKCESLGDV 81

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
           +++F+RL      SWT +I+ Y    +    + +F  M +E V    +T L+++  C  +
Sbjct: 82  EEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARL 141

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
           G L  G+ +HA+I+ +G +    +AN L+ +YG C  + SA  LF+ M+ +D++ WNA I
Sbjct: 142 GDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAAI 200

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
           +A AQ+  +  A ELF  M++  VRP  +T+V  L++C     +   + +H  + + GLE
Sbjct: 201 AANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVCA---TIRQAQAIHFIVRESGLE 257

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
             +++ TAL   YA+ G +  A  +F  A  RD+  WNAM+  Y  HG   EA + F  M
Sbjct: 258 QTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARM 317

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLG 524
              G+ P+ +T +     CS           F +M+HG  L   ++        ++D+  
Sbjct: 318 LHEGISPSKVTLVNASTGCS--------SLRFGRMIHGCALEKGLDRDIVLGNALLDMYT 369

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAAS 555
           R G  +EA  + K +P   N + W  ++A S
Sbjct: 370 RCGSPEEARHLFKRIPC--NAVSWNTMIAGS 398



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 243/489 (49%), Gaps = 21/489 (4%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +L+A     +   G+ IH   +  GL+ +  + N L+++Y +C SL     +F  +  RD
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRD 92

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
             SW+T+I  Y   G  + A+ +   M+   +R   V  ++++   A + D+  G++IHA
Sbjct: 93  EASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
            +V +    K    +A  L+ +Y  CG +A A  LF ++ ++ +VSW   I+   +  ++
Sbjct: 153 WIVESGLKGK--SVLANLLLHIYGSCGCVASAMLLFEKMERD-LVSWNAAIAANAQSGDL 209

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
              + LF  M  E V P+ IT++  +  C  +   Q    +H  +  +G E +L ++ AL
Sbjct: 210 GIALELFQRMQLEGVRPARITLVIALTVCATIRQAQA---IHFIVRESGLEQTLVVSTAL 266

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
              Y +   +  A+ +FD    +DV+ WNA++ AYAQ   + +A  LF  M    + P++
Sbjct: 267 ASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSK 326

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           VT+V   + C+   +L  G+ +H    ++GL+ D++L  AL+DMY +CG    A  LF  
Sbjct: 327 VTLVNASTGCS---SLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKR 383

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS----HAGL 492
            I  +   WN M+AG    G  + A+  F  M+  G+ P   T++ LL A +     A  
Sbjct: 384 -IPCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARA 442

Query: 493 VTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK--SMPLRPNMIVWG 549
           + EG+ +  ++V  G    P I     +V +    G +DEA    +  +M  R +++ W 
Sbjct: 443 MAEGRKLHSRIVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWN 500

Query: 550 ALLAASKLH 558
           A++++   H
Sbjct: 501 AIISSLSQH 509


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  346 bits (887), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 189/595 (31%), Positives = 324/595 (54%), Gaps = 11/595 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +  L+  Y +NN+   A  ++  M ++G + D+ ++ T+L    +    +  +++H   I
Sbjct: 166 WTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVI 225

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G D    VSN+L+  Y +  SL  A  LF+++P RD V+++ ++ GY + G   EA+ 
Sbjct: 226 KLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAIN 285

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+ +  RP+E    ++++    + D++ G+ +H  VV+ C +    V +A AL+D 
Sbjct: 286 LFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVK-C-NFVWNVFVANALLDF 343

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM----IEENVFPS 274
           YSK   +  A +LF  + +   +S+ V+++ Y     + E + LF E+     +   FP 
Sbjct: 344 YSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPF 403

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
             T+LS+         L +G+ +H+  +       + + N+LVDMY KC E   A  +F 
Sbjct: 404 A-TLLSI---AAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFS 459

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            +  +  + W A+IS+Y Q    +   +LF+ M+ +K+  +  T   ++  C    +L +
Sbjct: 460 DLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTL 519

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           GK LH++I   G   +V   +ALVDMYAKCG +  A ++F E   R+   WNA+++ Y  
Sbjct: 520 GKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQ 579

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           +G G+  L  F +M RSG++P+ ++ + +L ACSH GLV EG   FD M     LVPK E
Sbjct: 580 NGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKE 639

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HY   +D+L R G  DEA +++  MP  P+ I+W ++L +  +HKN  + + AA Q+  +
Sbjct: 640 HYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNM 699

Query: 575 EP-QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           +  ++    V MSNIYA A  W++V  V++ M+E  VKK P +S VE+    H F
Sbjct: 700 KVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKTHVF 754



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 141/482 (29%), Positives = 244/482 (50%), Gaps = 30/482 (6%)

Query: 7   FLNLEQTRQCHAHIIKTHFKFSYTNIINPL------TR-------------------YNS 41
           F ++ + RQ H+H+IK  +  S   + N L      TR                   +N+
Sbjct: 211 FDSVNEVRQVHSHVIKLGYD-STLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNA 269

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           L+T Y K      A+N++  M++ G     FT   IL A  Q+     G+++HGF +K  
Sbjct: 270 LLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCN 329

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
              + +V+NAL+  YS+   +V A  LF EMP  D +S++ ++  Y   G  +E+LE+ +
Sbjct: 330 FVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFK 389

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
           E++F           +++S+ A   ++D+G+ IH+  +    D    + +  +L+DMY+K
Sbjct: 390 ELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTI--VTDAISEILVGNSLVDMYAK 447

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
           CG    A ++F+ L   S V WT MIS Y++     +G++LF EM    +     T  S+
Sbjct: 448 CGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASI 507

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +  C  +  L LGK LH++I+ +G+  ++   +ALVDMY KC  I+ A  +F  M  ++ 
Sbjct: 508 VRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQEMPVRNS 567

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHT 400
           + WNA+ISAYAQ    D    LF  M  S ++P+ V+++ +L  C+  G +E G ++  +
Sbjct: 568 VSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDS 627

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHGCGE 459
                 L        + +DM  + G  + A +L ++  +  D  MW++++   G+H   E
Sbjct: 628 MTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQE 687

Query: 460 EA 461
            A
Sbjct: 688 LA 689



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/524 (26%), Positives = 267/524 (50%), Gaps = 13/524 (2%)

Query: 31  NIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           NII P TR  +LVT+      P   L++ A + K G   + +    ++K+  Q    +  
Sbjct: 66  NIIKPCTR--NLVTTL---TAPKPHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGA 120

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           +++           + + +N +I  Y + G+L  AR LFD M  R  V+W+ +I GY + 
Sbjct: 121 RKL----FDEMPHKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQN 176

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
               EA  +  EM    I P  V++ +++S F +   V+  + +H+ V++   D  L   
Sbjct: 177 NQFREAFGLFIEMGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTL--V 234

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           ++ +L+D Y K  +L  A QLFN + +   V++  +++GY +     E + LF +M E  
Sbjct: 235 VSNSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVG 294

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
             P+E T  +++     +  ++ G+ +H ++++  F +++ +ANAL+D Y K   +  A 
Sbjct: 295 YRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEAS 354

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            LF  M   D + +N +++ YA    + ++ ELF  ++ +           LLS+   + 
Sbjct: 355 KLFYEMPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISL 414

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
            L++G+ +H+         ++++  +LVDMYAKCG+   A R+FS+   +    W AM++
Sbjct: 415 NLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMIS 474

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
            Y   G  E+ L  FV+M+R+ +  +  T+  ++ AC+    +T GK +   ++ G G +
Sbjct: 475 SYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHII-GSGYI 533

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
             +     +VD+  + G + +A +M + MP+R N + W AL++A
Sbjct: 534 SNVFSGSALVDMYAKCGSIKDALQMFQEMPVR-NSVSWNALISA 576


>gi|302790816|ref|XP_002977175.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
 gi|300155151|gb|EFJ21784.1| hypothetical protein SELMODRAFT_106630 [Selaginella moellendorffii]
          Length = 806

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 194/536 (36%), Positives = 299/536 (55%), Gaps = 19/536 (3%)

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           +  EIHG  +         V NALI MY  CG L  A  +F +MP+R+VVSW++MI    
Sbjct: 275 IQSEIHGTRV--------LVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVA 326

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV---ADVDLGKAIHACVVRNCKDE 205
           + G    A+++   M    I P+E    S+VS  A +   A +D G+ IH+ +  +  D 
Sbjct: 327 QSGHYSFAVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDA 386

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS--VVSWTVMISGYIRCNEINEGVRLF 263
                +  +LI+MY++ G LA A+++F+ + +NS  VVS+T MI+ Y       + + +F
Sbjct: 387 D--PIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMIAAYAHNGHPRQALEIF 444

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA-NALVDMYGK 322
            EM    V P+EIT  +++  C  +G L  G W+H  ++ +G + S   A N+LVDMY K
Sbjct: 445 REMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAK 504

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C ++  A  +F+ MK+KD++ W  +I+A  Q+     A +L+  M  S + P+  T+  L
Sbjct: 505 CGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTL 564

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           L  C   G L MG+ +H    +  LE D   + AL  MYAKCG +  A RL+      D+
Sbjct: 565 LVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDV 624

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             W +M+A +   G    AL  + +ME  GV+PN +TFI +L +CS AGLV EG+  F  
Sbjct: 625 ATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHS 684

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
           +    G  P  EH+GCMVD+LGRAG L +A E++ SMP  P+ I W +LL++ KLH +  
Sbjct: 685 ITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAE 744

Query: 563 MGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRR---VMKEIRVKKEPG 615
           +G  AA  +LE++P++    V +S IYA A R +D+  ++R   + ++I V +  G
Sbjct: 745 IGTRAAECLLELDPESTSQFVALSQIYAAAGRNSDIDEIKRELALRRQIEVHRTTG 800



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 147/554 (26%), Positives = 257/554 (46%), Gaps = 24/554 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+  ++  ++P   L +Y  M    ++         + AC ++     G+ IH + +
Sbjct: 119 WNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSIH-YRV 177

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G   ++ + +AL+ MY++CG +  A   FD+        W+ ++      G    A+E
Sbjct: 178 ATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIE 237

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M     + S+ +    +   A    +  G  IH  +       +  V +  ALI M
Sbjct: 238 LFFQME--QHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTR--VLVLNALISM 293

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT- 277
           Y +CG L  A ++F  +   +VVSWT MI+   +    +  V+LF  MI E + P+E T 
Sbjct: 294 YVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGINPNEKTY 353

Query: 278 --ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
             ++S I   G    L  G+ +H+ I  +G +    + N+L++MY +   +  AR +FD 
Sbjct: 354 ASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDS 413

Query: 336 M--KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           +   SK V+ +  +I+AYA      +A E+F  M    V PNE+T   +L+ C   G L 
Sbjct: 414 ILENSKTVVSFTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLA 473

Query: 394 MGKWLHTYIEKQGLE-VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
            G W+H  + + GL+  D     +LVDMYAKCGD+  A R+F     +D+  W  ++A  
Sbjct: 474 SGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAAN 533

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
              G    AL  +  M +SG+ P+  T   LL AC++ G +  G+      +H   L  K
Sbjct: 534 VQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEK-----IHRQALRSK 588

Query: 513 IE---HY-GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
           +E   H+   +  +  + G L++A  + +      ++  W ++LAA   H    +  +A 
Sbjct: 589 LEQDAHFQNALAAMYAKCGSLEKATRLYRRCR-GSDVATWTSMLAA---HSQQGLASVAL 644

Query: 569 TQILEIEPQNYGYN 582
               E+E +    N
Sbjct: 645 ELYAEMESEGVRPN 658



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 240/523 (45%), Gaps = 21/523 (4%)

Query: 47  IKNNKPSSALNIY----AFMR----KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +KN  P + L I     A +R    ++ S         +L+ C        G+ +H   +
Sbjct: 18  LKNRGPPAGLLISRLDDALLRLDKLRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIV 77

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
              L  +A +   + QMY+ C    +A  LFD MP+R    W+ +++ +     P + LE
Sbjct: 78  SRRLARNALLGELVFQMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLE 137

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R M   + +PS    +  +     + D+  G++IH    R      +  +I +AL+ M
Sbjct: 138 LYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSIH---YRVATGRGINSSIQSALVTM 194

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y++CG +  A   F+   +     W  ++S           + LF +M +     S+ + 
Sbjct: 195 YAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIELFFQMEQHQC--SDRSC 252

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
              +  C   G L+ G  +H  I        + + NAL+ MY +C ++  A  +F  M  
Sbjct: 253 AIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPH 312

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA---LEMG 395
           ++V+ W ++I+A AQ+     A +LF  M    + PNE T   ++S     G    L+ G
Sbjct: 313 RNVVSWTSMIAAVAQSGHYSFAVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRG 372

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI--YRDICMWNAMMAGYG 453
           + +H+ I   G++ D I++ +L++MYA+ G +  A  +F   +   + +  +  M+A Y 
Sbjct: 373 RKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMIAAYA 432

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPK 512
            +G   +AL  F +M   GV PN ITF  +L AC   G +  G  + ++M+  GL     
Sbjct: 433 HNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDP 492

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAAS 555
              Y  +VD+  + G L  A  + ++M  + +++ W  ++AA+
Sbjct: 493 FA-YNSLVDMYAKCGDLGFAARVFETMKTK-DLVAWTTIIAAN 533



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 162/315 (51%), Gaps = 5/315 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++ +Y  N  P  AL I+  M   G   +  T  T+L AC  +     G  IH   I
Sbjct: 424 FTTMIAAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMI 483

Query: 99  KNGLD-GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           ++GLD  D +  N+L+ MY++CG L  A  +F+ M  +D+V+W+T+I    + G    AL
Sbjct: 484 ESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAAL 543

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           ++   M    I P    + +++   A++ D+ +G+ IH   +R+  ++        AL  
Sbjct: 544 DLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQD--AHFQNALAA 601

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+KCG+L  A +L+ R   + V +WT M++ + +    +  + L+AEM  E V P+E+T
Sbjct: 602 MYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVT 661

Query: 278 ILSLIIECGFVGGLQLGK-WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
            + ++I C   G +  G+ + H+     G + S      +VD+ G+  ++R A  L D M
Sbjct: 662 FIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSM 721

Query: 337 K-SKDVMIWNAVISA 350
               D + W +++S+
Sbjct: 722 PFYPDEIAWQSLLSS 736



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 111/214 (51%), Gaps = 2/214 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + +++ + +++    +AL++Y  M ++G   D  T+ T+L ACA +    +G++IH 
Sbjct: 523 LVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHR 582

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+++ L+ DA+  NAL  MY++CGSL  A  L+      DV +W++M+  + + GL   
Sbjct: 583 QALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASV 642

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           ALE+  EM    +RP+EV  I ++   +    V  G+     +  +   +         +
Sbjct: 643 ALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFG-CM 701

Query: 216 IDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMIS 248
           +D+  + G L  A++L + +      ++W  ++S
Sbjct: 702 VDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLS 735


>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
 gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
           Group]
 gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
 gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
          Length = 651

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 193/516 (37%), Positives = 286/516 (55%), Gaps = 36/516 (6%)

Query: 148 HRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           H  G+    L + R + R    RP  +    ++   A + +   G A  A V+R   D  
Sbjct: 100 HGHGVVRRCLPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSD 159

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
             V +  A     S  G +  A++LF+R     +VSW  +I GY+R     E + LF  M
Sbjct: 160 --VFVVNAATHFLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRM 217

Query: 267 IEEN--VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           + E+  V P E+T+++ +  CG +  L+LG+ LH ++  +G   ++ + NAL+DMY KC 
Sbjct: 218 VAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCG 277

Query: 325 EIR-------------------------------SARTLFDGMKSKDVMIWNAVISAYAQ 353
            +                                 AR +FD M  +DV  WNA+++ Y Q
Sbjct: 278 SLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQ 337

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
                +A  LF  M+ + V P+E+TMV LL+ C++ GALEMG W+H YIEK  L   V L
Sbjct: 338 CKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVAL 397

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
            T+L+DMYAKCG++  A  +F E   ++   W AM+ G   HG   EA+  F  M   G 
Sbjct: 398 GTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQ 457

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
           KP+ ITFIG+L+AC HAGLV EG+  F  M     L  K++HY CM+DLLGRAG LDEA 
Sbjct: 458 KPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAE 517

Query: 534 EMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVAN 593
           +++ +MP+ P+ +VWGA+  A ++  N S+GE AA +++EI+P + G  VL++N+YA AN
Sbjct: 518 QLVNTMPMEPDAVVWGAIFFACRMQGNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEAN 577

Query: 594 RWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
                  VR +M+ + V+K PG S +E+NG+VH+FI
Sbjct: 578 MRKKADKVRAMMRHLGVEKVPGCSCIELNGVVHEFI 613



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 161/491 (32%), Positives = 251/491 (51%), Gaps = 45/491 (9%)

Query: 60  AFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSEC 119
           A +R   +  D+ T P +LKACA++     G       ++ GLD D +V NA     S  
Sbjct: 114 ALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATHFLSIR 173

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD--IRPSEVAMIS 177
           G +  AR LFD  P RD+VSW+T+I GY R G P EALE+   M   D  +RP EV MI+
Sbjct: 174 GPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIA 233

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
            VS    + D++LG+ +H  V  +       V +  AL+DMY KCG+L  AK +F R+  
Sbjct: 234 AVSGCGQMRDLELGRRLHGFV--DSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEH 291

Query: 238 NSVVSWTVMI-------------------------------SGYIRCNEINEGVRLFAEM 266
            +VVSWT MI                               +GY++C +  E + LF EM
Sbjct: 292 RTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEM 351

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
            E +V P EIT+++L+  C  +G L++G W+H YI ++   FS+A+  +L+DMY KC  I
Sbjct: 352 QEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNI 411

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             A  +F  +  K+ + W A+I   A     ++A E F  M     +P+E+T +G+LS C
Sbjct: 412 EKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSAC 471

Query: 387 TEAGALEMGKWLHTYIE-KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICM 444
             AG ++ G+   + +E K  LE  +   + ++D+  + G ++ A +L +   +  D  +
Sbjct: 472 CHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVV 531

Query: 445 WNAMMAGYGMHG---CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           W A+     M G    GE+A +  V+++ S    +GI ++ L N  + A +  +   V  
Sbjct: 532 WGAIFFACRMQGNISLGEKAAMKLVEIDPSD---SGI-YVLLANMYAEANMRKKADKVRA 587

Query: 502 KMVH-GLGLVP 511
            M H G+  VP
Sbjct: 588 MMRHLGVEKVP 598



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 173/355 (48%), Gaps = 41/355 (11%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLG 90
           +  L  +N+L+  Y++   P+ AL ++  M    + V  D  T+   +  C Q+    LG
Sbjct: 188 VRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELG 247

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           + +HGF   +G+     + NAL+ MY +CGSL  A+ +F+ + +R VVSW+TMI G+ + 
Sbjct: 248 RRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKF 307

Query: 151 GL-----------PE--------------------EALEVMREMRFMDIRPSEVAMISMV 179
           GL           PE                    EAL +  EM+   + P E+ M++++
Sbjct: 308 GLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLL 367

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKL--GVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
           +  + +  +++G  +H    R  +  +L   VA+ T+LIDMY+KCGN+  A  +F  + +
Sbjct: 368 TACSQLGALEMGMWVH----RYIEKHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPE 423

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
            + ++WT MI G       NE +  F  MIE    P EIT + ++  C   G ++ G+  
Sbjct: 424 KNALTWTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREF 483

Query: 298 HAYI-LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
            + +  +   E  +   + ++D+ G+   +  A  L + M    D ++W A+  A
Sbjct: 484 FSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFA 538



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 120/242 (49%), Gaps = 2/242 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+T Y++  +   AL+++  M++     D  T+  +L AC+Q+    +G  +H +  
Sbjct: 328 WNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIE 387

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+ L     +  +LI MY++CG++  A ++F E+P ++ ++W+ MI G    G   EA+E
Sbjct: 388 KHRLVFSVALGTSLIDMYAKCGNIEKAIHIFKEIPEKNALTWTAMICGLANHGHANEAIE 447

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             R M  +  +P E+  I ++S       V  G+   + +      E+  +   + +ID+
Sbjct: 448 HFRTMIELGQKPDEITFIGVLSACCHAGLVKEGREFFSLMETKYHLER-KMKHYSCMIDL 506

Query: 219 YSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
             + G+L  A+QL N +  +   V W  +         I+ G +   +++E +   S I 
Sbjct: 507 LGRAGHLDEAEQLVNTMPMEPDAVVWGAIFFACRMQGNISLGEKAAMKLVEIDPSDSGIY 566

Query: 278 IL 279
           +L
Sbjct: 567 VL 568


>gi|356565095|ref|XP_003550780.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Glycine max]
          Length = 640

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 196/567 (34%), Positives = 296/567 (52%), Gaps = 54/567 (9%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVS-----ARYLFD 130
           ++L  C+ +  T   K+IH    K GL  D  V   L+     C   +S     A  LF 
Sbjct: 7   SLLSKCSSLKPT---KQIHAQICKTGLHTDPLVFGKLLL---HCAITISDALHYALRLFH 60

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVD 189
             PN D    +T+IR       P  +L    ++R    + P        +   A+   + 
Sbjct: 61  HFPNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLR 120

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
            G  +H+   R+  D    + + T LI MY++CG+   A+++F+ +++ +VV+W  +++ 
Sbjct: 121 PGIQLHSQAFRHGFDAH--IFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTA 178

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
             RC ++     +F  M   N                      L  W             
Sbjct: 179 AFRCGDVEGAQDVFGCMPVRN----------------------LTSW------------- 203

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
               N ++  Y K  E+  AR +F  M  +D + W+ +I  +A   C D+AF  F  +  
Sbjct: 204 ----NGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGFFRELLR 259

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
            ++R NEV++ G+LS C +AGA E GK LH ++EK G      +  AL+D Y+KCG+V  
Sbjct: 260 EEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVEKAGFLYVGSVNNALIDTYSKCGNVAM 319

Query: 430 AYRLFSE-AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
           A  +F    + R I  W +++AG  MHGCGEEA+  F +ME SGV+P+GITFI LL ACS
Sbjct: 320 ARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPDGITFISLLYACS 379

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           H+GLV EG  +F KM +  G+ P IEHYGCMVDL GRA  L +A+E I  MP+ PN I+W
Sbjct: 380 HSGLVEEGCGLFSKMKNLYGIEPAIEHYGCMVDLYGRAARLQKAYEFICEMPVSPNAIIW 439

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
             LL A  +H N  M E+   ++ E++P N G +VL+SN+YAVA +W DV+ +RR M E 
Sbjct: 440 RTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEH 499

Query: 609 RVKKEPGFSSVEVNGLVHKFIRGGMVN 635
            +KK PG+S +E++ +++ F+ G   N
Sbjct: 500 SMKKTPGWSMIEIDKVIYGFVAGEKPN 526



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 148/569 (26%), Positives = 234/569 (41%), Gaps = 151/569 (26%)

Query: 9   NLEQTRQCHAHIIKT------------------------HFKFS-YTNIINPLT-RYNSL 42
           +L+ T+Q HA I KT                        H+    + +  NP T  +N+L
Sbjct: 14  SLKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFHHFPNPDTFMHNTL 73

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           + S   +  P S+L+ +  +R+  +   D+FT    LKA A       G ++H  A ++G
Sbjct: 74  IRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPGIQLHSQAFRHG 133

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDE------------------------------ 131
            D   +V   LI MY+ECG   SAR +FDE                              
Sbjct: 134 FDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRCGDVEGAQDVFG 193

Query: 132 -MPNRDVVSWSTMIRGYHRGG-----------LP--------------------EEALEV 159
            MP R++ SW+ M+ GY + G           +P                    +EA   
Sbjct: 194 CMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFAHNGCFDEAFGF 253

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV----AIATAL 215
            RE+   +IR +EV++  ++S  A     + GK +H  V      EK G     ++  AL
Sbjct: 254 FRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFV------EKAGFLYVGSVNNAL 307

Query: 216 IDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           ID YSKCGN+A A+ +F  +    S+VSWT +I+G        E ++LF EM E  V P 
Sbjct: 308 IDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAIQLFHEMEESGVRPD 367

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRN--GFEFSLAMANALVDMYGKCREIRSARTL 332
            IT +SL+  C   G ++ G  L +  ++N  G E ++     +VD+YG     R+AR  
Sbjct: 368 GITFISLLYACSHSGLVEEGCGLFSK-MKNLYGIEPAIEHYGCMVDLYG-----RAAR-- 419

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
                                   + KA+E    M VS   PN +    LL  C+  G +
Sbjct: 420 ------------------------LQKAYEFICEMPVS---PNAIIWRTLLGACSIHGNI 452

Query: 393 EMGKWLHTYIEKQGLEV--DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           EM + +   + +   +   D +L + +  +  K  DV+   R  +E   +    W+ +  
Sbjct: 453 EMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTEHSMKKTPGWSMIEI 512

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGIT 479
              ++G        FV    +G KPN +T
Sbjct: 513 DKVIYG--------FV----AGEKPNEVT 529



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 158/378 (41%), Gaps = 58/378 (15%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +++++  +  N     A   +  + +     +  ++  +L ACAQ      GK +HGF  
Sbjct: 234 WSTMIVGFAHNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGKILHGFVE 293

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMIRGYHRGGLPEEAL 157
           K G      V+NALI  YS+CG++  AR +F  MP  R +VSW+++I G    G  EEA+
Sbjct: 294 KAGFLYVGSVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMHGCGEEAI 353

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           ++  EM    +RP  +  IS+               ++AC      +E  G         
Sbjct: 354 QLFHEMEESGVRPDGITFISL---------------LYACSHSGLVEEGCG--------- 389

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           ++SK  NL           + ++  +  M+  Y R   + +      EM    V P+ I 
Sbjct: 390 LFSKMKNLYGI--------EPAIEHYGCMVDLYGRAARLQKAYEFICEM---PVSPNAII 438

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFS--LAMANALVDMYGKCREIRSARTLFDG 335
             +L+  C   G +++ + + A +     + S    + + +  + GK +++ S R     
Sbjct: 439 WRTLLGACSIHGNIEMAELVKARLAEMDPDNSGDHVLLSNVYAVAGKWKDVSSIRRTMTE 498

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG-------LLSLCTE 388
              K    W+ +         IDK    F    V+  +PNEVT          +L L TE
Sbjct: 499 HSMKKTPGWSMIE--------IDKVIYGF----VAGEKPNEVTEEAHEKLREIMLRLRTE 546

Query: 389 AG-ALEMGKWLHTYIEKQ 405
           AG A ++   LH   E++
Sbjct: 547 AGYAPQLRSVLHDIEEEE 564



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 81/362 (22%), Positives = 142/362 (39%), Gaps = 72/362 (19%)

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFS-LAMANALVDMYGKCRE-IRSARTLFDGM 336
           +SL+ +C     L+  K +HA I + G     L     L+       + +  A  LF   
Sbjct: 6   VSLLSKCS---SLKPTKQIHAQICKTGLHTDPLVFGKLLLHCAITISDALHYALRLFHHF 62

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMG 395
            + D  + N +I + + +     +   FI ++    + P+  T    L     +  L  G
Sbjct: 63  PNPDTFMHNTLIRSLSLSQTPLSSLHPFIQLRRQPTLSPDSFTFAFALKAVANSRHLRPG 122

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE--------------AIYR- 440
             LH+   + G +  + + T L+ MYA+CGD   A R+F E              A +R 
Sbjct: 123 IQLHSQAFRHGFDAHIFVGTTLISMYAECGDSGSARRVFDEMSEPNVVTWNAVLTAAFRC 182

Query: 441 -DI--------CM-------WNAMMAGYGM------------------------------ 454
            D+        CM       WN M+AGY                                
Sbjct: 183 GDVEGAQDVFGCMPVRNLTSWNGMLAGYAKAGELGLARRVFYEMPLRDEVSWSTMIVGFA 242

Query: 455 -HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            +GC +EA  FF ++ R  ++ N ++  G+L+AC+ AG    GK +    V   G +   
Sbjct: 243 HNGCFDEAFGFFRELLREEIRTNEVSLTGVLSACAQAGAFEFGK-ILHGFVEKAGFLYVG 301

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
                ++D   + G +  A  + ++MP+  +++ W +++A   +H     GE A     E
Sbjct: 302 SVNNALIDTYSKCGNVAMARLVFQNMPVARSIVSWTSIIAGLAMH---GCGEEAIQLFHE 358

Query: 574 IE 575
           +E
Sbjct: 359 ME 360


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 197/592 (33%), Positives = 323/592 (54%), Gaps = 11/592 (1%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           L+  Y + N+   A  ++  M++ G+E D  T  T+L  C    M +   ++    IK G
Sbjct: 120 LIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLG 179

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
            D    V N L+  Y +   L  A  LF EMP  D VS++ MI GY + GL E+A+ +  
Sbjct: 180 YDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFV 239

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
           EM+   ++P+E    +++     + D+ LG+ IH+ V++   +    V ++ AL+D YSK
Sbjct: 240 EMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKT--NFVWNVFVSNALLDFYSK 297

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM----IEENVFPSEIT 277
             ++  A++LF+ + +   VS+ V+ISGY    +      LF E+     +   FP   T
Sbjct: 298 HDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPF-AT 356

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           +LS+          ++G+ +HA  +    +  + + N+LVDMY KC +   A  +F  + 
Sbjct: 357 MLSI---ASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLT 413

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +  + W A+ISAY Q    ++  +LF  M+ + V  ++ T   LL       +L +GK 
Sbjct: 414 HRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQ 473

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH++I K G   +V   +AL+D+YAKCG +  A + F E   R+I  WNAM++ Y  +G 
Sbjct: 474 LHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGE 533

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            E  L  F +M  SG++P+ ++F+G+L+ACSH+GLV EG   F+ M     L P+ EHY 
Sbjct: 534 AEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYA 593

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP- 576
            +VD+L R+G  +EA +++  MP+ P+ I+W ++L A ++HKN  +   AA Q+  +E  
Sbjct: 594 SVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEEL 653

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           ++    V MSNIYA A +W +V+ V + M++  VKK P +S VE+    H F
Sbjct: 654 RDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEIKHETHMF 705



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 140/427 (32%), Positives = 240/427 (56%), Gaps = 8/427 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH--LGKEIHGF 96
           YN+++T Y K+     A+N++  M+ +G +   FT   +L  CA + +    LG++IH F
Sbjct: 218 YNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDDIVLGQQIHSF 275

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
            IK     + +VSNAL+  YS+  S++ AR LFDEMP +D VS++ +I GY   G  + A
Sbjct: 276 VIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYA 335

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
            ++ RE++F      +    +M+S+ ++  D ++G+ IHA  +    D +  + +  +L+
Sbjct: 336 FDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSE--ILVGNSLV 393

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           DMY+KCG    A+ +F  L   S V WT MIS Y++     EG++LF +M + +V   + 
Sbjct: 394 DMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQA 453

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T  SL+     +  L LGK LH++I+++GF  ++   +AL+D+Y KC  I+ A   F  M
Sbjct: 454 TFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEM 513

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             ++++ WNA+ISAYAQ    +   + F  M +S ++P+ V+ +G+LS C+ +G +E G 
Sbjct: 514 PDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGL 573

Query: 397 W-LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGM 454
           W  ++  +   L+       ++VDM  + G  N A +L +E  I  D  MW++++    +
Sbjct: 574 WHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRI 633

Query: 455 HGCGEEA 461
           H   E A
Sbjct: 634 HKNQELA 640



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/451 (27%), Positives = 226/451 (50%), Gaps = 14/451 (3%)

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI 168
           +N +I  Y + G+L  AR LFD M  R  V+W+ +I GY +    +EA E+  +M+    
Sbjct: 86  TNMMISGYVKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGT 145

Query: 169 RPSEVAMISMVSLFADVADVDLGKAI---HACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
            P     ++ V+L +     ++G  I      +++   D +L   +   L+D Y K   L
Sbjct: 146 EPD---YVTFVTLLSGCNGHEMGNQITQVQTQIIKLGYDSRL--IVGNTLVDSYCKSNRL 200

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
             A QLF  + +   VS+  MI+GY +     + V LF EM    + P+E T  +++  C
Sbjct: 201 DLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--C 258

Query: 286 GFVG--GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
             +G   + LG+ +H+++++  F +++ ++NAL+D Y K   +  AR LFD M  +D + 
Sbjct: 259 ANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVS 318

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           +N +IS YA       AF+LF  ++ +     +     +LS+ +     EMG+ +H    
Sbjct: 319 YNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTI 378

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
               + ++++  +LVDMYAKCG    A  +F+   +R    W AM++ Y   G  EE L 
Sbjct: 379 VTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQ 438

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL 523
            F  M ++ V  +  TF  LL A +    ++ GK +   ++   G +  +     ++D+ 
Sbjct: 439 LFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKS-GFMSNVFSGSALLDVY 497

Query: 524 GRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            + G + +A +  + MP R N++ W A+++A
Sbjct: 498 AKCGSIKDAVQTFQEMPDR-NIVSWNAMISA 527



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 123/282 (43%), Gaps = 46/282 (16%)

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD---------------------- 334
           + A I++ GF+   + +N  V  + K  E+  AR LF+                      
Sbjct: 39  IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 98

Query: 335 ---------GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
                    GM  +  + W  +I  Y+Q +   +AFELF+ M+     P+ VT V LLS 
Sbjct: 99  LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 158

Query: 386 CTEAGALEMGKWL---HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           C      EMG  +    T I K G +  +I+   LVD Y K   ++ A +LF E    D 
Sbjct: 159 C---NGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDS 215

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             +NAM+ GY   G  E+A+  FV+M+ SG+KP   TF  +L  C++ GL      V  +
Sbjct: 216 VSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGL---DDIVLGQ 270

Query: 503 MVHGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
            +H        V  +     ++D   +   + +A ++   MP
Sbjct: 271 QIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMP 312


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  346 bits (887), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 192/599 (32%), Positives = 313/599 (52%), Gaps = 50/599 (8%)

Query: 74  IPTILKACAQVLMTHL-------GKEIHGFAIKNGL-DGDAYVSNALIQMYSECGSLVSA 125
           + T L+A    L+ HL       G+      + + + D + +  NAL+   +    +   
Sbjct: 39  LKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDM 98

Query: 126 RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFAD 184
             LF  MP RD VS++ +I G+   G P  ++++ R + R   +RP+ + + +M+ + + 
Sbjct: 99  ERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASA 158

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
           ++D  LG ++H  V+R      LG      + + L+DMY+K G +  A+++F  +   +V
Sbjct: 159 LSDRALGHSVHCQVLR------LGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTV 212

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIE-------------------------------E 269
           V +  +I+G +RC  I +   LF  M++                               E
Sbjct: 213 VMYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAE 272

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            V   + T  S++  CG +   + GK +HAYI R  +E ++ + +ALVDMY KCR IR A
Sbjct: 273 GVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLA 332

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             +F  M  ++++ W A+I  Y Q  C ++A   F  M++  ++P++ T+  ++S C   
Sbjct: 333 EAVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANL 392

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            +LE G   H      GL   + +  ALV +Y KCG +  A+RLF E  + D   W A++
Sbjct: 393 ASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALV 452

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
            GY   G  +E +  F  M  +G+KP+G+TFIG+L+ACS AGLV +G   FD M     +
Sbjct: 453 TGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDI 512

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
           VP  +HY CM+DL  R+G   EA E IK MP  P+   W  LL++ +L  N  +G+ AA 
Sbjct: 513 VPIDDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAE 572

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            +LE +PQN    VL+ +++A   +W +VA +RR M++ +VKKEPG S ++    VH F
Sbjct: 573 NLLETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIF 631


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 184/560 (32%), Positives = 306/560 (54%), Gaps = 7/560 (1%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD--AYVSNALIQMYSECGSLVSARYLFD 130
           ++ +++++      + LG+  H   IK  LD    +++ N L+ MYS+     SA+ L  
Sbjct: 8   SLASLVESAVSTQCSRLGRAAHAQIIKT-LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLS 66

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
             PNR VV+W+ +I G  + G    AL     MR   I+P++            +    +
Sbjct: 67  LTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLV 126

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           GK +HA  V+    +   V +  +  DMYSK G    A+++F+ + + ++ +W   +S  
Sbjct: 127 GKQVHALAVK--AGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNS 184

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
           +     ++ +  F E   E   P+ IT  + +  C     L+LG+ LH ++L++GFE  +
Sbjct: 185 VLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADV 244

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS 370
           ++AN L+D YGKC ++  +  +F G+   + + W ++I +Y Q    +KA  +F+  +  
Sbjct: 245 SVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKE 304

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
            + P +  +  +LS C     LE+GK +HT   K  +  ++ + +ALVDMY KCG +  A
Sbjct: 305 GIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDA 364

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG--VKPNGITFIGLLNACS 488
            R F E   R++  WNAM+ GY   G  + A+  F +M      V PN +TF+ +L+ACS
Sbjct: 365 ERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACS 424

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
            AG V  G  +F+ M    G+ P  EHY C+VDLLGRAG++++A++ IK MP+RP + VW
Sbjct: 425 RAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVW 484

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
           GALL ASK+     +G++AA  + E++P + G +VL+SN++A A RW +   VR+ MK++
Sbjct: 485 GALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDV 544

Query: 609 RVKKEPGFSSVEVNGLVHKF 628
            +KK  G S +     VH F
Sbjct: 545 GIKKGAGCSWITAGNAVHVF 564



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 134/475 (28%), Positives = 235/475 (49%), Gaps = 31/475 (6%)

Query: 14  RQCHAHIIKTH----FKFSYTNIIN---PLTRYNS------------------LVTSYIK 48
           R  HA IIKT       F Y +++N    L R NS                  L+   ++
Sbjct: 26  RAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTPNRSVVTWTALIAGSVQ 85

Query: 49  NNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYV 108
           N + +SAL  ++ MR++  + ++FT P   KA   +    +GK++H  A+K G   D +V
Sbjct: 86  NGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFV 145

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI 168
             +   MYS+ G    AR +FDEMP R++ +W+  +      G  ++AL    E R    
Sbjct: 146 GCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGW 205

Query: 169 RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYA 228
            P+ +   + ++  A  + + LG+ +H  V+++  +    V++A  LID Y KC  +  +
Sbjct: 206 EPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEAD--VSVANGLIDFYGKCHQVGCS 263

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
           + +F+ +++ + VSW  MI  Y++ +E  +   +F    +E + P++  + S++  C  +
Sbjct: 264 EIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGL 323

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
             L++GK +H   ++     ++ + +ALVDMYGKC  I  A   FD M  ++++ WNA+I
Sbjct: 324 SVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMI 383

Query: 349 SAYAQAHCIDKAFELFIHMKVS--KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE-KQ 405
             YA     D A  LF  M     +V PN VT V +LS C+ AG++ +G  +   +  + 
Sbjct: 384 GGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRY 443

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHGCGE 459
           G+E        +VD+  + G V  AY+   +  I   + +W A++    M G  E
Sbjct: 444 GIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSE 498


>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Brachypodium distachyon]
          Length = 707

 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 202/569 (35%), Positives = 313/569 (55%), Gaps = 13/569 (2%)

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           I  +L+A A     H G ++HG  +K G   D  + N LI MY++CG L  A  +F  MP
Sbjct: 7   IADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMP 66

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM-DIRPSEVAMISMVSLFADVADVDLGK 192
            R+VVSW+ ++ G+ R G   E L ++  MR + D+ P+E  + + +     V D+  G 
Sbjct: 67  ERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGV 126

Query: 193 AIH-ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
            IH ACV    +   +   +A +L+ +YSK G +  A+++F+     ++V+W  MISGY 
Sbjct: 127 WIHGACVRAGFEGHHV---VANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYA 183

Query: 252 RCNEINEGVRLFAEMI-----EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
                 + + +F EM      EE+  P E T  SL+  CG +G  + G  +HA ++  G 
Sbjct: 184 HAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGV 243

Query: 307 EFS--LAMANALVDMYGKCREIRS-ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
             +    +A AL+DMY KCR +   A  +F+ ++ K+ + W  VI  +AQ   + +A EL
Sbjct: 244 STASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMEL 303

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F     S VR +   +  ++ +  +   +E G+ +H Y  K    +DV +  +L+DMY K
Sbjct: 304 FGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHK 363

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
           CG  + A R F E   R++  W AM+ G G HG G+EA+  F +M   GV+P+ + ++ L
Sbjct: 364 CGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLAL 423

Query: 484 LNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           L+ACSH+GLV E +  F  + H   L P+ EHY CMVDLLGRAG L EA +++ +MP+ P
Sbjct: 424 LSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAP 483

Query: 544 NMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRR 603
            + VW  LL+A ++HKN ++G  A   +L I+  N    V++SNI+A A  W +   VR 
Sbjct: 484 TVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRG 543

Query: 604 VMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
            M+   ++K+ G S VEV    H F  GG
Sbjct: 544 AMRRRGLRKQGGCSWVEVGKEAHFFYGGG 572



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 203/426 (47%), Gaps = 9/426 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN-FTIPTILKACAQVLMTHLGKEIHGFA 97
           + +L+  ++++      L +   MR       N FT+   LKAC  V     G  IHG  
Sbjct: 73  WTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWIHGAC 132

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           ++ G +G   V+N+L+ +YS+ G +  AR +FD    R++V+W+ MI GY   G   ++L
Sbjct: 133 VRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAGHGRDSL 192

Query: 158 EVMREMRFM-----DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            V REM+       D +P E    S++     +     G  +HA +V           +A
Sbjct: 193 LVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTASNAILA 252

Query: 213 TALIDMYSKCGN-LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
            AL+DMY KC   L  A Q+FNRL Q + + WT +I G+ +  ++ E + LF       V
Sbjct: 253 GALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGRFWSSGV 312

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
                 + S++        ++ G+ +H Y ++      +++AN+L+DMY KC     A  
Sbjct: 313 RADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGLTDEAAR 372

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
            F  + +++V+ W A+I+   +     +A  +F  M+   V P+EV  + LLS C+ +G 
Sbjct: 373 RFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSACSHSGL 432

Query: 392 LEMGKWLHTYIE-KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMM 449
           +E  +   + I   + L         +VD+  + G+++ A  L +   +   + +W  ++
Sbjct: 433 VEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVGVWQTLL 492

Query: 450 AGYGMH 455
           +   +H
Sbjct: 493 SACRVH 498



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 103/212 (48%), Gaps = 2/212 (0%)

Query: 38  RYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           ++ +++  + +  +   A+ ++     +G   D   + +++   A   +   G+++H + 
Sbjct: 283 QWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYT 342

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K     D  V+N+LI MY +CG    A   F E+P R+VVSW+ MI G  + G  +EA+
Sbjct: 343 VKTPAGLDVSVANSLIDMYHKCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAI 402

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            +  EMR   + P EVA ++++S  +    V+  +   +  +R+ +  +        ++D
Sbjct: 403 HMFEEMRAEGVEPDEVAYLALLSACSHSGLVEECRRYFS-AIRHDRRLRPRAEHYACMVD 461

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVS-WTVMIS 248
           +  + G L+ AK L   +     V  W  ++S
Sbjct: 462 LLGRAGELSEAKDLVATMPMAPTVGVWQTLLS 493


>gi|297830924|ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329184|gb|EFH59603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 824

 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 195/599 (32%), Positives = 335/599 (55%), Gaps = 11/599 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L++ Y+K  + + A   +A M +   +    +   +  A A           +G  +
Sbjct: 186 WNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSRSIKKANVFYGLML 245

Query: 99  KNGLD--GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
           K G +   D +V ++ I MY+E G L S+R +FD    R++  W+TMI  Y +     E+
Sbjct: 246 KLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVES 305

Query: 157 LEVMRE-MRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           +E+  E +   +I   EV  +   S  + +  V+LG+  H  V +N ++  L + I  +L
Sbjct: 306 IELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRE--LPIVIINSL 363

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           + MYS+CG +  +  +F+ + +  VVSW  MIS +++    +EG+ L  EM ++      
Sbjct: 364 MVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDY 423

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           IT+ +L+     +   ++GK  H +++R G +F   M + L+DMY K   IR ++ LF+G
Sbjct: 424 ITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFE-GMNSYLIDMYAKSGLIRISQKLFEG 482

Query: 336 --MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
                +D   WN++IS Y Q    ++ F +F  M    +RPN VT+  +L  C++ G+++
Sbjct: 483 SGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTVASILPACSQVGSVD 542

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           +GK LH +  +Q L+ +V + +ALVDMY+K G +  A  +FS+   R+   +  M+ GYG
Sbjct: 543 LGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTTMILGYG 602

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            HG GE A+  F+ M+  G+KP+ I F+ +L+ACS++GLV EG  +F+ M     + P  
Sbjct: 603 QHGMGERAISLFLSMQELGIKPDAIAFVAVLSACSYSGLVDEGLKIFEDMREVYNIQPSS 662

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI-VWGALLAASKLHKNPSMGEIAATQIL 572
           EHY C+ D+LGR G ++EA+E +K +    N+  +WG+LL + +LH    + E  + ++ 
Sbjct: 663 EHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCRLHGELELAETVSERLA 722

Query: 573 EIEP-QNY-GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +++  +N+ GY VL+SN+YA    W  V  VR+ M+E  +KKE G S +EV G V+ F+
Sbjct: 723 KLDKGKNFSGYEVLLSNMYAEEQNWKSVDRVRKGMREKGLKKEVGRSGIEVAGHVNCFV 781



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 160/586 (27%), Positives = 287/586 (48%), Gaps = 41/586 (6%)

Query: 29  YTNIINPLT-RYNSLVTSYIKNNKPSSALNIYAFMRKNG--SEVDNFTIPTILKACAQVL 85
           +  I  P T  +N+++  +I NN P  AL  Y+ M+K    ++ D +T  + LKACA+  
Sbjct: 62  FDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSSTLKACAETK 121

Query: 86  MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSEC----GSLVS------ARYLFDEMPNR 135
               GK +H   I+   +    V N+L+ MY  C    GS +        R +FD M  +
Sbjct: 122 NLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVRKVFDNMRRK 181

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
           +VV+W+T+I  Y + G   EA      M  M+I+PS V+ +++    A    +      +
Sbjct: 182 NVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSRSIKKANVFY 241

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
             +++   +    + + ++ I MY++ G+L  ++++F+   + ++  W  MI  Y++ + 
Sbjct: 242 GLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVYVQNDC 301

Query: 256 INEGVRLFAEMI-EENVFPSEITILSLIIECGFVGGLQ---LGKWLHAYILRNGFEFSLA 311
           + E + LF E I  + +   E+T L   +    V GLQ   LG+  H ++ +N  E  + 
Sbjct: 302 LVESIELFLEAIGSKEIVSDEVTFL---LAASAVSGLQQVELGRQFHGFVSKNFRELPIV 358

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           + N+L+ MY +C  ++ +  +F  M+ +DV+ WN +ISA+ Q    D+   L   M+   
Sbjct: 359 IINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 418

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
            + + +T+  LLS  +     E+GK  H ++ +QG++ +  + + L+DMYAK G +  + 
Sbjct: 419 FKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFEG-MNSYLIDMYAKSGLIRISQ 477

Query: 432 RLFSEAIY--RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           +LF  + Y  RD   WN+M++GY  +G  EE  + F  M    ++PN +T   +L ACS 
Sbjct: 478 KLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTVASILPACSQ 537

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
            G V  GK      +HG  +   ++        +VD+  +AG +  A  M      R N 
Sbjct: 538 VGSVDLGKQ-----LHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAENMFSQTKER-NS 591

Query: 546 IVWGALLAASKLHKNPSMGEIA-----ATQILEIEPQNYGYNVLMS 586
           + +  ++     H    MGE A     + Q L I+P    +  ++S
Sbjct: 592 VTYTTMILGYGQH---GMGERAISLFLSMQELGIKPDAIAFVAVLS 634



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/449 (24%), Positives = 220/449 (48%), Gaps = 26/449 (5%)

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD--IRPSEVAMISMVSLF 182
           AR LFD +P    V W+T+I G+    LP EAL     M+      +       S +   
Sbjct: 58  ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSSTLKAC 117

Query: 183 ADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLA----------YAKQLF 232
           A+  ++  GKA+H  ++R  ++      +  +L++MY  C N              +++F
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSR--VVHNSLMNMYVSCLNAPGSELDCFEYDVVRKVF 175

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
           + + + +VV+W  +IS Y++     E  R FA M+   + PS ++ +++         ++
Sbjct: 176 DNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSRSIK 235

Query: 293 LGKWLHAYILRNGFEF--SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
                +  +L+ G E+   L + ++ + MY +  ++ S+R +FD    +++ +WN +I  
Sbjct: 236 KANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGV 295

Query: 351 YAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
           Y Q  C+ ++ ELF+    SK +  +EVT +   S  +    +E+G+  H ++ K   E+
Sbjct: 296 YVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNFREL 355

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
            +++  +L+ MY++CG V  ++ +F     RD+  WN M++ +  +G  +E L+   +M+
Sbjct: 356 PIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 415

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC---MVDLLGRA 526
           + G K + IT   LL+A S+       K +  K  HG  +   I+  G    ++D+  ++
Sbjct: 416 KQGFKIDYITVTALLSAASN----LRNKEI-GKQTHGFLIRQGIQFEGMNSYLIDMYAKS 470

Query: 527 GLLDEAHEMIK-SMPLRPNMIVWGALLAA 554
           GL+  + ++ + S     +   W ++++ 
Sbjct: 471 GLIRISQKLFEGSGYAERDQATWNSMISG 499



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 163/347 (46%), Gaps = 17/347 (4%)

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP--SEITILS 280
           GN   A+QLF+ + + + V W  +I G+I  N  +E +  ++ M +   F      T  S
Sbjct: 53  GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSS 112

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR----------EIRSAR 330
            +  C     L+ GK +H +++R     S  + N+L++MY  C           E    R
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVR 172

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +FD M+ K+V+ WN +IS Y +     +A   F  M   +++P+ V+ V +      + 
Sbjct: 173 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSR 232

Query: 391 ALEMGKWLHTYIEKQGLEV--DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
           +++     +  + K G E   D+ + ++ + MYA+ GD+  + R+F   + R+I +WN M
Sbjct: 233 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTM 292

Query: 449 MAGYGMHGCGEEALIFFVD-MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           +  Y  + C  E++  F++ +    +  + +TF+   +A S    V  G+     +    
Sbjct: 293 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNF 352

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
             +P +     MV +  R G + ++  +  SM  R +++ W  +++A
Sbjct: 353 RELPIVIINSLMV-MYSRCGFVQKSFGVFHSMRER-DVVSWNTMISA 397


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 174/446 (39%), Positives = 266/446 (59%), Gaps = 4/446 (0%)

Query: 185 VADVDLGKAIHACVV-RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSW 243
           +  V+ G+ +HA +V  +  D  L   +   +++MY+KCG L  A+++F+ +    +V+W
Sbjct: 100 LGKVEQGRIVHAHLVDSHFLDNHL--VLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTW 157

Query: 244 TVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
           T +I+G+ + N   + + LF +M+   + P+  T+ SL+   G   GL  G  LHA+ L+
Sbjct: 158 TALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLK 217

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
            G++ S+ + +ALVDMY +C  + +A+  FDGM +K  + WNA+IS +A+    + A  L
Sbjct: 218 YGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHL 277

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
              M+    +P   T   + S C   GALE GKW+H ++ K GL++   +   L+DMYAK
Sbjct: 278 LWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLLDMYAK 337

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
            G ++ A R+F   +  D+  WN M+ G   HG G+E L  F  M R G++PN I+F+ +
Sbjct: 338 AGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCV 397

Query: 484 LNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           L ACSH+GL+ EG   F+ ++    + P + HY   VDLLGR GLLD A   I+ MP+ P
Sbjct: 398 LTACSHSGLLDEGLYYFE-LMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEP 456

Query: 544 NMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRR 603
              VWGALL A ++HKN  +G  AA +  E++P + G  +L+SNIYA A RW DVA VR+
Sbjct: 457 TAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLLSNIYASAGRWRDVAKVRK 516

Query: 604 VMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +MKE  VKK+P  S VE+   VH F+
Sbjct: 517 MMKESGVKKQPACSWVEIENAVHLFV 542



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 189/391 (48%), Gaps = 35/391 (8%)

Query: 9   NLEQTRQCHAHIIKTHFKFSY---TNII----------------------NPLTRYNSLV 43
            +EQ R  HAH++ +HF  ++    NII                        +  + +L+
Sbjct: 102 KVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALI 161

Query: 44  TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD 103
             + +NN+P  AL ++  M + G + ++FT+ ++LKA         G ++H F +K G  
Sbjct: 162 AGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQ 221

Query: 104 GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
              YV +AL+ MY+ CG + +A+  FD MP +  VSW+ +I G+ R G  E AL ++ +M
Sbjct: 222 SSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKM 281

Query: 164 RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCG 223
           +  + +P+     S+ S  A +  ++ GK +HA ++++    KL   I   L+DMY+K G
Sbjct: 282 QRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKS--GLKLIAFIGNTLLDMYAKAG 339

Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLII 283
           ++  AK++F+RL +  VVSW  M++G  +     E +  F +M+   + P+EI+ L ++ 
Sbjct: 340 SIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLT 399

Query: 284 ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVM 342
            C   G L  G +    + +   E  +      VD+ G+   +  A      M       
Sbjct: 400 ACSHSGLLDEGLYYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAA 459

Query: 343 IWNAVISAYAQ-------AHCIDKAFELFIH 366
           +W A++ A           +  ++AFEL  H
Sbjct: 460 VWGALLGACRMHKNMELGVYAAERAFELDPH 490



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 167/312 (53%), Gaps = 7/312 (2%)

Query: 251 IRCNEINEGVRLFA-EMIEENVFPSEITILS-LIIECGFVGGLQLGKWLHAYILRNGF-E 307
           +R ++ + G  L+A ++I+      +  + S L+ EC  +G ++ G+ +HA+++ + F +
Sbjct: 61  LRKSQSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLD 120

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             L + N +V+MY KC  +  AR +FD M +KD++ W A+I+ ++Q +    A  LF  M
Sbjct: 121 NHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQM 180

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
               ++PN  T+  LL        L+ G  LH +  K G +  V + +ALVDMYA+CG +
Sbjct: 181 LRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHM 240

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
           + A   F     +    WNA+++G+   G GE AL     M+R   +P   T+  + +AC
Sbjct: 241 DAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSAC 300

Query: 488 SHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
           +  G + +GK V   M+  GL L+  I +   ++D+  +AG +D+A  +   + ++P+++
Sbjct: 301 ASIGALEQGKWVHAHMIKSGLKLIAFIGN--TLLDMYAKAGSIDDAKRVFDRL-VKPDVV 357

Query: 547 VWGALLAASKLH 558
            W  +L     H
Sbjct: 358 SWNTMLTGCAQH 369



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 11/211 (5%)

Query: 382 LLSLCTEAGALEMGKWLHTY-IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
           LL  CT  G +E G+ +H + ++   L+  ++L+  +V+MYAKCG ++ A R+F E   +
Sbjct: 93  LLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTK 152

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           D+  W A++AG+  +    +AL+ F  M R G++PN  T   LL A      +  G  + 
Sbjct: 153 DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLH 212

Query: 501 DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
                  G    +     +VD+  R G +D A      MP + + + W AL++    H  
Sbjct: 213 -AFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTK-SEVSWNALISG---HAR 267

Query: 561 PSMGEIA-----ATQILEIEPQNYGYNVLMS 586
              GE A       Q    +P ++ Y+ + S
Sbjct: 268 KGEGEHALHLLWKMQRKNFQPTHFTYSSVFS 298



 Score = 45.8 bits (107), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           ++R  + P+   +  LL  C+  G V +G+ V   +V    L   +     +V++  + G
Sbjct: 78  IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLM 585
            LD+A  M   MP + +M+ W AL+A    +  P    +   Q+L   ++P ++  + L+
Sbjct: 138 CLDDARRMFDEMPTK-DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLL 196


>gi|356521639|ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Glycine max]
          Length = 699

 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 210/594 (35%), Positives = 324/594 (54%), Gaps = 16/594 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKN--GSEVDNFTIPTILKACAQVLMTHLGKEIHGF 96
           +  ++ +Y  N+ PS  +++Y  MR +   +  D      + K+CA+          H  
Sbjct: 99  FKVMIRAYFLNDTPSGVVSLYRLMRLSLHPTPHDYVLFSIVFKSCAESRDFQTLTITHCH 158

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM-PNRDVVSWSTMIRGYHRGGLPEE 155
            +K+ L  D++V   L+  Y++   +  A   FDE+  N DVVSW++MI  Y +     E
Sbjct: 159 FVKS-LPSDSFVLTCLVDAYAKFARVDEATRAFDEIHENDDVVSWTSMIVAYVQNDCARE 217

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIAT 213
            L +   MR   +  +E  + S+VS    +  +  GK +H  V++N  C +  L     T
Sbjct: 218 GLTLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQGKWVHGFVIKNGICVNSYL----TT 273

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNS----VVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
           +L++MY KCGN+  A ++F+  + +S    +VSWT MI GY +    +  + LF +    
Sbjct: 274 SLLNMYVKCGNIQDACKVFDESSSSSYDRDLVSWTAMIVGYSQRGYPHLALELFKDKKWS 333

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            + P+ +T+ SL+  C  +G   +GK LH   ++ G +    + NALVDMY KC  +  A
Sbjct: 334 GILPNSVTVSSLLSSCAQLGNSVMGKLLHGLAVKCGLD-DHPVRNALVDMYAKCGVVSDA 392

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
           R +F+ M  KDV+ WN++IS + Q+    +A  LF  M +    P+ VT+VG+LS C   
Sbjct: 393 RCVFEAMLEKDVVSWNSIISGFVQSGEAYEALNLFRRMGLELFSPDAVTVVGILSACASL 452

Query: 390 GALEMGKWLHTYIEKQGLEVDVI-LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
           G L +G  +H    K GL V  I + TAL++ YAKCGD   A  +F     ++   W AM
Sbjct: 453 GMLHLGCSVHGLALKDGLVVSSIYVGTALLNFYAKCGDARAARMVFDSMGEKNAVTWGAM 512

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           + GYGM G G  +L  F DM    V+PN + F  +L ACSH+G+V EG  +F+ M   L 
Sbjct: 513 IGGYGMQGDGNGSLTLFRDMLEELVEPNEVVFTTILAACSHSGMVGEGSRLFNLMCGELN 572

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
            VP ++HY CMVD+L RAG L+EA + I+ MP++P++ V+GA L    LH    +G  A 
Sbjct: 573 FVPSMKHYACMVDMLARAGNLEEALDFIERMPVQPSVSVFGAFLHGCGLHSRFELGGAAI 632

Query: 569 TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
            ++LE+ P    Y VL+SN+YA   RW  V  VR ++K+  + K PG SSVE++
Sbjct: 633 KKMLELHPDEACYYVLVSNLYASDGRWGMVKQVREMIKQRGLNKVPGCSSVEMD 686



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 157/510 (30%), Positives = 255/510 (50%), Gaps = 24/510 (4%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           K +H   + +GL  D  +S  L+ +Y+  G L  AR +F+ +P RD+  +  MIR Y   
Sbjct: 50  KTLHASFLIHGLTNDLLLSTKLLSLYASFGQLRHARKIFNHLPTRDLYCFKVMIRAYFLN 109

Query: 151 GLPEEALEVMREMRF-MDIRPSEVAMISMV-SLFADVADVDLGKAIHACVVRNCKDEKLG 208
             P   + + R MR  +   P +  + S+V    A+  D       H   V++   +   
Sbjct: 110 DTPSGVVSLYRLMRLSLHPTPHDYVLFSIVFKSCAESRDFQTLTITHCHFVKSLPSDSF- 168

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQN-SVVSWTVMISGYIRCNEINEGVRLFAEMI 267
             + T L+D Y+K   +  A + F+ +++N  VVSWT MI  Y++ +   EG+ LF  M 
Sbjct: 169 --VLTCLVDAYAKFARVDEATRAFDEIHENDDVVSWTSMIVAYVQNDCAREGLTLFNRMR 226

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
           E  V  +E T+ SL+  C  +  L  GKW+H ++++NG   +  +  +L++MY KC  I+
Sbjct: 227 EAFVDGNEFTVGSLVSACTKLNWLHQGKWVHGFVIKNGICVNSYLTTSLLNMYVKCGNIQ 286

Query: 328 SARTLFDGMKS----KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
            A  +FD   S    +D++ W A+I  Y+Q      A ELF   K S + PN VT+  LL
Sbjct: 287 DACKVFDESSSSSYDRDLVSWTAMIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSSLL 346

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
           S C + G   MGK LH    K GL+ D  ++ ALVDMYAKCG V+ A  +F   + +D+ 
Sbjct: 347 SSCAQLGNSVMGKLLHGLAVKCGLD-DHPVRNALVDMYAKCGVVSDARCVFEAMLEKDVV 405

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            WN++++G+   G   EAL  F  M      P+ +T +G+L+AC+  G++  G S     
Sbjct: 406 SWNSIISGFVQSGEAYEALNLFRRMGLELFSPDAVTVVGILSACASLGMLHLGCS----- 460

Query: 504 VHGLGL-----VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           VHGL L     V  I     +++   + G    A  +  SM  + N + WGA++    + 
Sbjct: 461 VHGLALKDGLVVSSIYVGTALLNFYAKCGDARAARMVFDSMGEK-NAVTWGAMIGGYGMQ 519

Query: 559 KNPSMGEIAATQILE--IEPQNYGYNVLMS 586
            + +        +LE  +EP    +  +++
Sbjct: 520 GDGNGSLTLFRDMLEELVEPNEVVFTTILA 549



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 192/376 (51%), Gaps = 9/376 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + +++  Y +   P  AL ++   + +G   ++ T+ ++L +CAQ+  + +GK +HG
Sbjct: 304 LVSWTAMIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQLGNSVMGKLLHG 363

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+K GLD D  V NAL+ MY++CG +  AR +F+ M  +DVVSW+++I G+ + G   E
Sbjct: 364 LAVKCGLD-DHPVRNALVDMYAKCGVVSDARCVFEAMLEKDVVSWNSIISGFVQSGEAYE 422

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL + R M      P  V ++ ++S  A +  + LG ++H   +++       + + TAL
Sbjct: 423 ALNLFRRMGLELFSPDAVTVVGILSACASLGMLHLGCSVHGLALKDGLVVS-SIYVGTAL 481

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           ++ Y+KCG+   A+ +F+ + + + V+W  MI GY    + N  + LF +M+EE V P+E
Sbjct: 482 LNFYAKCGDARAARMVFDSMGEKNAVTWGAMIGGYGMQGDGNGSLTLFRDMLEELVEPNE 541

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFD 334
           +   +++  C   G +  G  L   +     F  S+     +VDM  +   +  A    +
Sbjct: 542 VVFTTILAACSHSGMVGEGSRLFNLMCGELNFVPSMKHYACMVDMLARAGNLEEALDFIE 601

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFEL--FIHMKVSKVRPNEVTMVGLLS-LCTEAGA 391
            M  +  +   +V  A+     +   FEL      K+ ++ P+E     L+S L    G 
Sbjct: 602 RMPVQPSV---SVFGAFLHGCGLHSRFELGGAAIKKMLELHPDEACYYVLVSNLYASDGR 658

Query: 392 LEMGKWLHTYIEKQGL 407
             M K +   I+++GL
Sbjct: 659 WGMVKQVREMIKQRGL 674


>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
          Length = 673

 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 197/574 (34%), Positives = 311/574 (54%), Gaps = 55/574 (9%)

Query: 67  SEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECG-----S 121
           S++ +  I  +L       + HL K+ H   ++ G   D+Y++ +L++ Y+        S
Sbjct: 29  SKLSHKAILHLLNTQCTTSLHHL-KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLS 87

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
             S+  +FD +   +V  W+ MI+       P +A+ +  EM     RP++    +++  
Sbjct: 88  FESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKA 147

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVA--IATALIDMYSKCGNLAYAKQLFN-RLNQN 238
            +D   V  G  +HA +V++     LG    I ++ I MY+  G L  A+++ + +  + 
Sbjct: 148 CSDSGVVAEGVQVHAHLVKH----GLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEV 203

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
             V W  MI GY+R  E+     LF  M + ++  +                     W  
Sbjct: 204 DAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMIST---------------------W-- 240

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
                          NA++  + +C  +  AR  FD MK +D + W+A+I  Y Q  C  
Sbjct: 241 ---------------NAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFM 285

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALV 418
           +A E+F  M+  K+RP +  +  +LS C   GAL+ G+W+HTY ++  +++D +L T+LV
Sbjct: 286 EALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSLV 345

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           DMYAKCG ++ A+ +F +   +++  WNAM+ G  MHG  E+A+  F  M+   + PN I
Sbjct: 346 DMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD---IYPNEI 402

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           TF+G+LNAC+H GLV +G ++F+ M    G+ P+IEHYGC+VDLLGRAGLL EA +++ S
Sbjct: 403 TFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSS 462

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDV 598
           +P  P   VWGALL A + H N  +GE     +LE+EPQN G   L+SNIYA A RW +V
Sbjct: 463 IPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNSGRYTLLSNIYAKAGRWEEV 522

Query: 599 AGVRRVMKEIRVKKEPGFSSVEV-NGLVHKFIRG 631
             VR++MKE  +K  PG S +++  G VHKFI G
Sbjct: 523 GEVRKLMKERGIKTTPGTSIIDLGRGEVHKFIIG 556



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 174/378 (46%), Gaps = 71/378 (18%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++   I+NN+P  A+ +Y  M    S  + +T P +LKAC+   +   G ++H   +
Sbjct: 106 WNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKACSDSGVVAEGVQVHAHLV 165

Query: 99  KNGLDGDAYVSNALIQMYSECGSLV--------------------------------SAR 126
           K+GL GD ++ ++ I+MY+  G LV                                +AR
Sbjct: 166 KHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAAR 225

Query: 127 YLFDEMPNR--------------------------------DVVSWSTMIRGYHRGGLPE 154
            LF+ MP+R                                D +SWS MI GY + G   
Sbjct: 226 ELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCFM 285

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           EALE+  +M+   IRP +  + S++S  A++  +D G+ IH    RN    +L   + T+
Sbjct: 286 EALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSI--QLDGVLGTS 343

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+DMY+KCG +  A ++F +++   V SW  MI G        + + LF++M   +++P+
Sbjct: 344 LVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKM---DIYPN 400

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLF 333
           EIT + ++  C   G +Q G  +   + +  G E  +     +VD+ G+   +  A  + 
Sbjct: 401 EITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVV 460

Query: 334 DGMKSKDV-MIWNAVISA 350
             + ++    +W A++ A
Sbjct: 461 SSIPTEPTPAVWGALLGA 478



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 116/235 (49%), Gaps = 13/235 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +++++  YI+      AL I+  M+K       F +P++L ACA +     G+ IH +A 
Sbjct: 271 WSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAK 330

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +N +  D  +  +L+ MY++CG +  A  +F++M N++V SW+ MI G    G  E+A++
Sbjct: 331 RNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAID 390

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT----A 214
           +  +   MDI P+E+  + +++  A    V  G  I      N   ++ GV         
Sbjct: 391 LFSK---MDIYPNEITFVGVLNACAHGGLVQKGLTIF-----NSMRKEYGVEPQIEHYGC 442

Query: 215 LIDMYSKCGNLAYAKQLFNRL-NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           ++D+  + G L  A+++ + +  + +   W  ++    +   +  G R+   ++E
Sbjct: 443 IVDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLE 497


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 197/594 (33%), Positives = 315/594 (53%), Gaps = 19/594 (3%)

Query: 46  YIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD 103
           Y +N+    A  ++  M ++ S    D+ T  T+L  C   +  +   ++H FA+K G D
Sbjct: 120 YARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFD 179

Query: 104 GDAY--VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
            + +  VSN L++ Y E   L  A  LF+E+P +D V+++T+I GY + GL  E++ +  
Sbjct: 180 TNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFL 239

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALIDMY 219
           +MR    +PS+     ++     + D  LG+ +HA  V     +D  +G  I    +D Y
Sbjct: 240 KMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQI----LDFY 295

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM----IEENVFPSE 275
           SK   +   + LF+ + +   VS+ V+IS Y + ++    +  F EM     +   FP  
Sbjct: 296 SKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPF- 354

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            T+LS+      +  LQ+G+ LH   L    +  L + N+LVDMY KC     A  +F  
Sbjct: 355 ATMLSIAAN---LSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKS 411

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +  +  + W A+IS Y Q        +LF  M+ S +R ++ T   +L       +L +G
Sbjct: 412 LPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLG 471

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           K LH +I + G   +V   + LVDMYAKCG +  A ++F E   R+   WNA+++ +  +
Sbjct: 472 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADN 531

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G GE A+  F  M  SG++P+ ++ +G+L ACSH G V +G   F  M    G+ PK +H
Sbjct: 532 GDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKH 591

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y CM+DLLGR G   EA +++  MP  P+ I+W ++L A ++HKN S+ E AA ++  +E
Sbjct: 592 YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSME 651

Query: 576 P-QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
             ++    V MSNIYA A  W  V  V++ M+E  +KK P +S VEVN  +H F
Sbjct: 652 KLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVF 705



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 222/419 (52%), Gaps = 4/419 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L+T Y K+   + +++++  MR++G +  +FT   +LKA   +    LG+++H  ++
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV 277

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G   DA V N ++  YS+   ++  R LFDEMP  D VS++ +I  Y +    E +L 
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLH 337

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             REM+ M          +M+S+ A+++ + +G+ +H   +    D  L V    +L+DM
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV--GNSLVDM 395

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KC     A+ +F  L Q + VSWT +ISGY++      G++LF +M   N+   + T 
Sbjct: 396 YAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTF 455

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            +++        L LGK LHA+I+R+G   ++   + LVDMY KC  I+ A  +F+ M  
Sbjct: 456 ATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPD 515

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KW 397
           ++ + WNA+ISA+A     + A   F  M  S ++P+ V+++G+L+ C+  G +E G ++
Sbjct: 516 RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEY 575

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMH 455
                   G+         ++D+  + G    A +L  E  +  D  MW++++    +H
Sbjct: 576 FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIH 634



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/468 (27%), Positives = 215/468 (45%), Gaps = 21/468 (4%)

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD- 167
           +N +I  + + G + SAR LFD MP+R VV+W+ ++  Y R    +EA ++ R+M     
Sbjct: 82  TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141

Query: 168 -IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLA 226
              P  V   +++    D    +    +HA  V+   D    + ++  L+  Y +   L 
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD 201

Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
            A  LF  + +   V++  +I+GY +     E + LF +M +    PS+ T   ++    
Sbjct: 202 LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261

Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
            +    LG+ LHA  +  GF    ++ N ++D Y K   +   R LFD M   D + +N 
Sbjct: 262 GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNV 321

Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
           VIS+Y+QA   + +   F  M+             +LS+     +L+MG+ LH     Q 
Sbjct: 322 VISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC----QA 377

Query: 407 L--EVDVILK--TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY---GMHGCGE 459
           L    D IL    +LVDMYAKC     A  +F     R    W A+++GY   G+HG G 
Sbjct: 378 LLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG- 436

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
             L  F  M  S ++ +  TF  +L A +    +  GK +   ++    L       G +
Sbjct: 437 --LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-L 493

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
           VD+  + G + +A ++ + MP R N + W AL++A   H +   GE A
Sbjct: 494 VDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISA---HADNGDGEAA 537



 Score = 43.1 bits (100), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 2/83 (2%)

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           + +    ++  + K GDV+ A  LF     R +  W  +M  Y  +   +EA   F  M 
Sbjct: 78  NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137

Query: 470 RSG--VKPNGITFIGLLNACSHA 490
           RS     P+ +TF  LL  C+ A
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDA 160


>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
 gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
          Length = 594

 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 194/547 (35%), Positives = 305/547 (55%), Gaps = 52/547 (9%)

Query: 92  EIHGFAIKNGLDGDAYVSNALI---QMYSECGSLVSARYLFD--EMPNRDVVSWSTMIRG 146
           ++H   IK  L  + Y    L+     +   GSL  A+ LFD  ++P R+   ++TMI+ 
Sbjct: 49  QLHTLLIKTSLIKEKYAFGRLLLSFASFDNLGSLNYAQKLFDTVDIP-RNSFMYTTMIKA 107

Query: 147 YHRGGLPEEALEVMREMRFMDIR---PSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
           Y   G P EA      M   D R   P++     + S  +    V  GK  HA +++   
Sbjct: 108 YANFGNPREAFAFYSRM-LCDQRYVYPNDFTFTYVFSACSKFNGVFEGKQAHAQMIKF-- 164

Query: 204 DEKLGVAIATALIDMYSKCGNLA-YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
             + GV    +L+D Y K G +    +++F+++    VVSW  +I+GY++  +++E  RL
Sbjct: 165 PFEFGVHSWNSLLDFYGKVGEVGIVVRRVFDKIEGPDVVSWNCLINGYVKSGDLDEARRL 224

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F EM E +V    I ++    + GF+                                  
Sbjct: 225 FDEMPERDVVSWTIMLVGYA-DAGFLS--------------------------------- 250

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
                 A  LFD M  ++++ W+A+I  Y Q  C  KA ELF  M+V+KV+ +EV +  L
Sbjct: 251 -----EASCLFDEMPKRNLVSWSALIKGYIQIGCYSKALELFKEMQVAKVKMDEVIVTTL 305

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           LS C   GAL+ G+WLH YI+K G++VD  L TAL+DMY+KCG ++ A+++F E   + +
Sbjct: 306 LSACARLGALDQGRWLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKV 365

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
            +W++M+ G  MH  GE+A+  F  M   G++P+ IT+I +L AC+H+GLV  G  +F++
Sbjct: 366 FVWSSMIGGLAMHSFGEKAIELFAKMIECGIEPSEITYINILAACTHSGLVDVGLQIFNR 425

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
           MV      P+++HYGC+VDLLGRAGLL +A  ++++MP++ +  +W ALL+A KLH+N  
Sbjct: 426 MVENQKPKPRMQHYGCIVDLLGRAGLLHDAFRVVETMPVKADPAIWRALLSACKLHRNVE 485

Query: 563 MGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
           +GE     ++++EPQN    VL SN+YA  NRW+    +RR MK   ++K PG SS+E+N
Sbjct: 486 LGEQVGRILIKMEPQNDMNYVLFSNVYAAVNRWDISGKLRREMKVRGMQKNPGCSSIELN 545

Query: 623 GLVHKFI 629
           G VH+F+
Sbjct: 546 GAVHEFV 552



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 203/439 (46%), Gaps = 49/439 (11%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLGKEIHGF 96
           Y +++ +Y     P  A   Y+ M  +   V  ++FT   +  AC++      GK+ H  
Sbjct: 101 YTTMIKAYANFGNPREAFAFYSRMLCDQRYVYPNDFTFTYVFSACSKFNGVFEGKQAHAQ 160

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSL-VSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            IK   +   +  N+L+  Y + G + +  R +FD++   DVVSW+ +I GY + G  +E
Sbjct: 161 MIKFPFEFGVHSWNSLLDFYGKVGEVGIVVRRVFDKIEGPDVVSWNCLINGYVKSGDLDE 220

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A  +  EM   D+    + ++                                       
Sbjct: 221 ARRLFDEMPERDVVSWTIMLVG-------------------------------------- 242

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
              Y+  G L+ A  LF+ + + ++VSW+ +I GYI+    ++ + LF EM    V   E
Sbjct: 243 ---YADAGFLSEASCLFDEMPKRNLVSWSALIKGYIQIGCYSKALELFKEMQVAKVKMDE 299

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           + + +L+  C  +G L  G+WLH YI ++G +    ++ AL+DMY KC  I  A  +F  
Sbjct: 300 VIVTTLLSACARLGALDQGRWLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQE 359

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
              K V +W+++I   A     +KA ELF  M    + P+E+T + +L+ CT +G +++G
Sbjct: 360 TGDKKVFVWSSMIGGLAMHSFGEKAIELFAKMIECGIEPSEITYINILAACTHSGLVDVG 419

Query: 396 -KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYG 453
            +  +  +E Q  +  +     +VD+  + G ++ A+R+     +  D  +W A+++   
Sbjct: 420 LQIFNRMVENQKPKPRMQHYGCIVDLLGRAGLLHDAFRVVETMPVKADPAIWRALLSACK 479

Query: 454 MH---GCGEEALIFFVDME 469
           +H     GE+     + ME
Sbjct: 480 LHRNVELGEQVGRILIKME 498



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/168 (32%), Positives = 92/168 (54%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +++L+  YI+    S AL ++  M+    ++D   + T+L ACA++     G+ +H 
Sbjct: 264 LVSWSALIKGYIQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSACARLGALDQGRWLHM 323

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +  K+G+  DA++S ALI MYS+CG +  A  +F E  ++ V  WS+MI G       E+
Sbjct: 324 YIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMHSFGEK 383

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
           A+E+  +M    I PSE+  I++++       VD+G  I   +V N K
Sbjct: 384 AIELFAKMIECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQK 431


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 190/558 (34%), Positives = 299/558 (53%), Gaps = 14/558 (2%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           M   G  V +     +L  C +       + +HG   K G   D +V+ +L+  Y  C +
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSA 128

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
              AR LFD MP R+VV+W+ ++ GY     P   LEV  EM  M   PS   + + ++ 
Sbjct: 129 ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNA 188

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
                DVDLGK +H   ++   +     ++  +L  +Y+K G+L  A + F R+ + +V+
Sbjct: 189 CLASCDVDLGKQVHGYAIKYGAESI--TSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVI 246

Query: 242 SWTVMISGYIRCNEINE-GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           +WT MIS      E  E G+ LF +M+ + V P+E T+ S++  CG    L LGK + A+
Sbjct: 247 TWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAF 306

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK- 359
             + G E +L + N+ + +Y +  E   A  LF+ M+   ++ WNA+IS YAQ     K 
Sbjct: 307 SFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKD 366

Query: 360 ----------AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
                     A  +F  +K S ++P+  T   +LS+C+   ALE G+ +H    K G   
Sbjct: 367 DLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLS 426

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           DV++ +ALV+MY KCG +  A + F E   R    W +M++GY  HG  +EA+  F +M 
Sbjct: 427 DVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMR 486

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
            +GV+PN ITF+ LL+ACS+AGLV E +  FD M     + P ++HYGCM+D+  R G +
Sbjct: 487 LAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRV 546

Query: 530 DEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIY 589
           ++A   IK     PN  +W +L+A  + H N  +   AA ++LE++P+     +L+ N+Y
Sbjct: 547 EDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLNMY 606

Query: 590 AVANRWNDVAGVRRVMKE 607
               RW DVA VR++MK+
Sbjct: 607 ISTERWQDVARVRKLMKQ 624



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 147/520 (28%), Positives = 259/520 (49%), Gaps = 51/520 (9%)

Query: 9   NLEQTRQCHAHIIKTHFK---FSYTNIINPLTR---------------------YNSLVT 44
           +L   R  H H+ KT      F  T+++N   R                     + +LVT
Sbjct: 93  SLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMPERNVVTWTALVT 152

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
            Y  N++P+  L ++  M + G    ++T+   L AC       LGK++HG+AIK G + 
Sbjct: 153 GYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAES 212

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
              + N+L  +Y++ GSL SA   F  +P ++V++W+TMI         EE +E+   + 
Sbjct: 213 ITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMISACAED---EECVELGMSL- 268

Query: 165 FMD-----IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
           F+D     + P+E  + S++SL     D++LGK + A   +   +  L V  +T  + +Y
Sbjct: 269 FIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNST--MYLY 326

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-----------EGVRLFAEMIE 268
            + G    A +LF ++   S+++W  MISGY +  +             + + +F ++  
Sbjct: 327 LRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKR 386

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
             + P   T  S++  C  +  L+ G+ +HA  +++GF   + + +ALV+MY KC  I+ 
Sbjct: 387 SVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQD 446

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           A   F  M ++  + W ++IS Y+Q     +A +LF  M+++ VRPNE+T V LLS C+ 
Sbjct: 447 ANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSY 506

Query: 389 AGALEMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWN 446
           AG +E  +     ++K+  +E  V     ++DM+ + G V  A+       +  +  +W+
Sbjct: 507 AGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWS 566

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGI-TFIGLLN 485
           +++AG   HG  E  L F+   +   +KP GI T+I LLN
Sbjct: 567 SLVAGCRSHGNME--LAFYAADKLLELKPKGIETYILLLN 604


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  345 bits (886), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 183/533 (34%), Positives = 307/533 (57%), Gaps = 4/533 (0%)

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G   D  +SN LI MY +CG L  A  +FD M  R+VVSW+ ++ G+ + G P E+L + 
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
            +M    ++P++    + +     +  +D+G+ IH   V+   D  +   +  ++IDMYS
Sbjct: 62  SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFD--MVNVVGNSIIDMYS 119

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           KCG +  A  +F  +   +++SW  MI+GY       + + LF +M E   F  E T  S
Sbjct: 120 KCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTS 179

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSL--AMANALVDMYGKCREIRSARTLFDGMKS 338
            +  C  +G ++ G  +HA+++  GF +S+  A+A AL+D+Y KC ++  AR +F  ++ 
Sbjct: 180 TLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEE 239

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           K V+ W A+I  YAQ   + ++ ELF  ++ S ++ +   +  ++ +  +   ++ GK +
Sbjct: 240 KHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQM 299

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H +  K    VD+ +  +++DMY KCG +N A RLFSE   R++  W  M+ GYG HG G
Sbjct: 300 HAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLG 359

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           +EA+  F +M+    +P+ +T++ +L  CSH+GLV +G+  F ++    G+  ++EHY C
Sbjct: 360 KEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYAC 419

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLLGRAG L EA  ++ SMPL  N+ +W  LL+A ++H +  +G+     +L ++ +N
Sbjct: 420 MVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSEN 479

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               V+MSNIYA A  W +   +R ++K  ++KKE G S VE++  VH F  G
Sbjct: 480 PVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGG 532



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 224/420 (53%), Gaps = 2/420 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+  +I+N  P  +L +++ M  +G + ++FT  T LKAC  +    +G++IH   +
Sbjct: 41  WTALMCGHIQNGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICV 100

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G D    V N++I MYS+CG +  A  +F+ MP R+++SW+ MI GY   G  E+AL 
Sbjct: 101 KTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALV 160

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + ++M+ +     E    S +   +D+  +  G  IHA ++       +  A+A ALID+
Sbjct: 161 LFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDL 220

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCG L  A+++F+ + +  V+SWT +I GY +   + E + LF ++ E ++      +
Sbjct: 221 YVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFIL 280

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++        +Q GK +HA+ ++      +++ N+++DMY KC  I  A  LF  M +
Sbjct: 281 SSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPA 340

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-W 397
           ++V+ W  +I+ Y +     +A  LF  M++    P++VT + +L  C+ +G +E G+ +
Sbjct: 341 RNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEY 400

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMHG 456
                   G++  V     +VD+  + G +  A  L  S  +  ++ +W  +++   +HG
Sbjct: 401 FSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHG 460



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 176/322 (54%), Gaps = 6/322 (1%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  +N+++  Y        AL ++  M++ G  +D FT  + LKAC+ +     G +
Sbjct: 136 VRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQ 195

Query: 93  IHGFAIKNGL--DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           IH F I  G     +  V+ ALI +Y +CG L  AR +F  +  + V+SW+ +I GY + 
Sbjct: 196 IHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQE 255

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
           G   E++E+ R++R   I+     + SM+ +FAD A V  GK +HA  ++      + ++
Sbjct: 256 GNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIK--VPSGVDIS 313

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           +  +++DMY KCG +  A++LF+ +   +V+SWTVMI+GY +     E +RLF EM  ++
Sbjct: 314 VCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDS 373

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILR-NGFEFSLAMANALVDMYGKCREIRSA 329
             P ++T L++++ C   G ++ G+   + +   +G +  +     +VD+ G+   ++ A
Sbjct: 374 TEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEA 433

Query: 330 RTLFDGMK-SKDVMIWNAVISA 350
           + L D M    +V IW  ++SA
Sbjct: 434 KNLVDSMPLEANVGIWQTLLSA 455


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  345 bits (885), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 189/570 (33%), Positives = 318/570 (55%), Gaps = 9/570 (1%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF 129
           D  T+ T+L  CA +     G+ +HG A+K+G D    VSN L+ MY++CG +  A   F
Sbjct: 164 DEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAAPRVSNVLVDMYAKCGEMADAECAF 223

Query: 130 DEMP---NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD--IRPSEVAMISMVSLFAD 184
            E P    R+VVSW+ M+ GY R G    A  ++REM+  +  +   E+ M+S++ + + 
Sbjct: 224 LEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREMQMEERGVPADEITMLSVLPVCSG 283

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
           + ++   + +HA VVR       G  +  ALI  Y +CG L +A ++F+ +    V SW 
Sbjct: 284 LPELAKLRELHAFVVRR-GLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKMVSSWN 342

Query: 245 VMISGYIRCNEINEGVRLFAEMIEE-NVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
            +I  + +  E +  + LF EM       P   +I SL++ CG +  L  GK  H +ILR
Sbjct: 343 ALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAHGFILR 402

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
           NG E    +  +L+ +Y +C     AR LFD ++ KD + WN +I+ Y+Q     ++ +L
Sbjct: 403 NGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPGESLQL 462

Query: 364 FIHMKVSKVR--PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
           F  M+  K    P+ +     L  C+E  A+ +GK +H +  K  L  D  L ++++DMY
Sbjct: 463 FREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFLSSSIIDMY 522

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
           +KCG V+ A   F     +D   W  M+ GY ++G G+EA+  +  M R G++P+G T++
Sbjct: 523 SKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREGMEPDGFTYL 582

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
           GLL AC HAG++ +G   F +M +   +  K+EHY C++ +L RAG   +A  +++ MP 
Sbjct: 583 GLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLEHYACVIGMLSRAGRFADAVALMEVMPE 642

Query: 542 RPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGV 601
            P+  +  ++L+A  +H    +G+  A ++LE+EP    + VL SN+YA + +W+++  V
Sbjct: 643 EPDAKILSSVLSACHMHGEVELGKKVADKLLELEPHKAEHYVLASNMYAGSRQWDEMRKV 702

Query: 602 RRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           R+++++  V KEPG S +++ G V+ F+ G
Sbjct: 703 RKMLRDAGVAKEPGCSWIDIAGKVYSFVAG 732



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 156/480 (32%), Positives = 243/480 (50%), Gaps = 26/480 (5%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYA--FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           L ++N L+    +  + + AL I        +G   D FT+P  LK+C        G+++
Sbjct: 30  LPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSC----RGDDGRQV 85

Query: 94  HGFAIKNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           H  A K GL DGD +V N+L+ MY  CG +  A  +F+ M  R++VSW+ ++        
Sbjct: 86  HAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVAD--- 142

Query: 153 PEEALEVMREMRFMDI----RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           P   LE+ R+    D+     P E  +++++ + A +A  + G+A+H   V++  D    
Sbjct: 143 PRRGLELFRDC-LEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDA--A 199

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNS---VVSWTVMISGYIRCNEINEGVRLFAE 265
             ++  L+DMY+KCG +A A+  F      +   VVSW VM+ GY R  E      L  E
Sbjct: 200 PRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLRE 259

Query: 266 M-IEENVFPS-EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM-ANALVDMYGK 322
           M +EE   P+ EIT+LS++  C  +  L   + LHA+++R G   +  M  NAL+  YG+
Sbjct: 260 MQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGR 319

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVG 381
           C  +  A  +FDG+ SK V  WNA+I A+AQ      A ELF  M      +P+  ++  
Sbjct: 320 CGCLLHACRVFDGICSKMVSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGS 379

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           LL  C     L  GK  H +I + GLE D  ++ +L+ +Y +CG  + A  LF     +D
Sbjct: 380 LLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKD 439

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDME--RSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
              WN M+AGY  +G   E+L  F +M+  + G  P+ +     L ACS    V  GK +
Sbjct: 440 EVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEM 499



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 171/324 (52%), Gaps = 34/324 (10%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPL------------------------ 36
           + + +G   L + R+ HA +++     +   + N L                        
Sbjct: 278 LPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRCGCLLHACRVFDGICSKM 337

Query: 37  -TRYNSLVTSYIKNNKPSSALNIYAFMRKN-GSEVDNFTIPTILKACAQVLMTHLGKEIH 94
            + +N+L+ ++ +N + S+A+ ++  M    G + D F+I ++L AC  +     GK  H
Sbjct: 338 VSSWNALIGAHAQNGEASAAIELFREMTNACGQKPDWFSIGSLLLACGNLKHLLHGKAAH 397

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           GF ++NGL+ D+++  +L+ +Y +CG    AR LFD +  +D VSW+TMI GY + GLP 
Sbjct: 398 GFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAVEEKDEVSWNTMIAGYSQNGLPG 457

Query: 155 EALEVMREMRFMDIR--PSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVA 210
           E+L++ REM+       PS +A  S +   +++  V LGK +H   ++   C+D  L   
Sbjct: 458 ESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRLGKEMHCFALKADLCEDSFL--- 514

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
            ++++IDMYSKCG++  A+  F+RL     VSWTVMI+GY       E V L+ +M  E 
Sbjct: 515 -SSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAVNGRGKEAVGLYDKMGREG 573

Query: 271 VFPSEITILSLIIECGFVGGLQLG 294
           + P   T L L++ CG  G L+ G
Sbjct: 574 MEPDGFTYLGLLMACGHAGMLEDG 597



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 136/306 (44%), Gaps = 28/306 (9%)

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMI--EENVFPSEITILSLIIECGFVGGLQL 293
           N  S+  W  +++   R     + + +   ++   + V P   T+   +  C    G Q+
Sbjct: 26  NAASLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSCRGDDGRQV 85

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
                   L +G  F   + N+LV MYG+C  +  A  +F+GM  ++++ WNA+++A A 
Sbjct: 86  HAVAAKLGLADGDPF---VGNSLVSMYGRCGRVDDAEKVFEGMAGRNLVSWNALMAAVAD 142

Query: 354 AHCIDKAFELF---IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
                +  ELF   +        P+E T+V +L +C      E G+ +H    K G +  
Sbjct: 143 PR---RGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGWDAA 199

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIY---RDICMWNAMMAGYGMHGCGEEA--LIFF 465
             +   LVDMYAKCG++  A   F EA     R++  WN M+ GY  +G    A  L+  
Sbjct: 200 PRVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLRE 259

Query: 466 VDMERSGVKPNGITFIGLLNACS-----------HAGLVTEGKSVFDKMVHGLGLVPKIE 514
           + ME  GV  + IT + +L  CS           HA +V  G  +   MV    L+    
Sbjct: 260 MQMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPN-ALIAAYG 318

Query: 515 HYGCMV 520
             GC++
Sbjct: 319 RCGCLL 324


>gi|302763819|ref|XP_002965331.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
 gi|300167564|gb|EFJ34169.1| hypothetical protein SELMODRAFT_82859 [Selaginella moellendorffii]
          Length = 806

 Score =  345 bits (885), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 194/536 (36%), Positives = 299/536 (55%), Gaps = 19/536 (3%)

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           +  EIHG  +         V NALI MY  CG L  A  +F +MP+R+VVSW++MI    
Sbjct: 275 IQSEIHGTRV--------LVLNALISMYVRCGKLDEALRVFADMPHRNVVSWTSMIAAVA 326

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV---ADVDLGKAIHACVVRNCKDE 205
           + G    ++++   M    I P+E    S+VS  A +   A +D G+ IH+ +  +  D 
Sbjct: 327 QTGHYSFSVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRGRKIHSQITASGIDA 386

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS--VVSWTVMISGYIRCNEINEGVRLF 263
                +  +LI+MY++ G LA A+++F+ + +NS  VVS+T MIS Y       + + +F
Sbjct: 387 D--PIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMISAYAHNGHPRQALEIF 444

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA-NALVDMYGK 322
            EM    V P+EIT  +++  C  +G L  G W+H  ++ +G + S   A N+LVDMY K
Sbjct: 445 REMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDPFAYNSLVDMYAK 504

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C ++  A  +F+ MK+KD++ W  +I+A  Q+     A +L+  M  S + P+  T+  L
Sbjct: 505 CGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTL 564

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           L  C   G L MG+ +H    +  LE D   + AL  MYAKCG +  A RL+      D+
Sbjct: 565 LVACANLGDLAMGEKIHRQALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDV 624

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             W +M+A +   G    AL  + +ME  GV+PN +TFI +L +CS AGLV EG+  F  
Sbjct: 625 ATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHS 684

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
           +    G  P  EH+GCMVD+LGRAG L +A E++ SMP  P+ I W +LL++ KLH +  
Sbjct: 685 ITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLSSCKLHTDAE 744

Query: 563 MGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRR---VMKEIRVKKEPG 615
           +G  AA  +LE++P++    V +S IYA A R +D+  ++R   + ++I V +  G
Sbjct: 745 IGTRAAECLLELDPESTSQFVALSQIYAAAGRNSDIDEIKRELALRRQIEVHRTTG 800



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 148/554 (26%), Positives = 257/554 (46%), Gaps = 24/554 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N L+  ++  ++P   L +Y  M    ++         + AC ++     G+ IH + +
Sbjct: 119 WNVLMKEFLAADRPRDTLELYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSIH-YRV 177

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
             G   ++ + +AL+ MY++CG +  A   FD+        W+ ++      G    A+E
Sbjct: 178 ATGRGINSSIQSALVTMYAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIE 237

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M     + S+ +    +   A    +  G  IH  +       +  V +  ALI M
Sbjct: 238 LFFQME--QHQCSDRSCAIALGACAAAGHLRGGIQIHDKIQSEIHGTR--VLVLNALISM 293

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT- 277
           Y +CG L  A ++F  +   +VVSWT MI+   +    +  V+LF  MI E + P+E T 
Sbjct: 294 YVRCGKLDEALRVFADMPHRNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGINPNEKTY 353

Query: 278 --ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
             ++S I   G    L  G+ +H+ I  +G +    + N+L++MY +   +  AR +FD 
Sbjct: 354 ASVVSAIAHLGRDAILDRGRKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDS 413

Query: 336 M--KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           +   SK V+ +  +ISAYA      +A E+F  M    V PNE+T   +L+ C   G L 
Sbjct: 414 ILENSKTVVSFTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLA 473

Query: 394 MGKWLHTYIEKQGLE-VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
            G W+H  + + GL+  D     +LVDMYAKCGD+  A R+F     +D+  W  ++A  
Sbjct: 474 SGAWIHERMIESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAAN 533

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
              G    AL  +  M +SG+ P+  T   LL AC++ G +  G+      +H   L  K
Sbjct: 534 VQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEK-----IHRQALRSK 588

Query: 513 IE---HY-GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
           +E   H+   +  +  + G L++A  + +      ++  W ++LAA   H    +  +A 
Sbjct: 589 LEQDAHFQNALAAMYAKCGSLEKATRLYRRCR-GSDVATWTSMLAA---HSQQGLASVAL 644

Query: 569 TQILEIEPQNYGYN 582
               E+E +    N
Sbjct: 645 ELYAEMESEGVRPN 658



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 239/523 (45%), Gaps = 21/523 (4%)

Query: 47  IKNNKPSSALNIY----AFMR----KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +KN  P + L I     A +R    ++ S         +L+ C        G+ +H   +
Sbjct: 18  LKNRGPPAGLLISRLDDALLRLDKLRHRSTSQLLLYANLLRQCGNQRALDHGRRVHAHIV 77

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
              L  +A +   + QMY+ C    +A  LFD MP+R    W+ +++ +     P + LE
Sbjct: 78  SRRLARNALLGELVFQMYARCRCFDTAIALFDAMPDRRPFCWNVLMKEFLAADRPRDTLE 137

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R M   + +PS    +  +     + D+  G++IH    R      +  +I +AL+ M
Sbjct: 138 LYRRMSVENTQPSACGFMWAIVACGRIKDLAQGRSIH---YRVATGRGINSSIQSALVTM 194

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y++CG +  A   F+   +     W  ++S           + LF +M +     S+ + 
Sbjct: 195 YAQCGRIDLAMAAFDDNRELGTAPWNAIMSALAGAGHHRRAIELFFQMEQHQC--SDRSC 252

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
              +  C   G L+ G  +H  I        + + NAL+ MY +C ++  A  +F  M  
Sbjct: 253 AIALGACAAAGHLRGGIQIHDKIQSEIHGTRVLVLNALISMYVRCGKLDEALRVFADMPH 312

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA---LEMG 395
           ++V+ W ++I+A AQ      + +LF  M    + PNE T   ++S     G    L+ G
Sbjct: 313 RNVVSWTSMIAAVAQTGHYSFSVKLFDGMIAEGINPNEKTYASVVSAIAHLGRDAILDRG 372

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI--YRDICMWNAMMAGYG 453
           + +H+ I   G++ D I++ +L++MYA+ G +  A  +F   +   + +  +  M++ Y 
Sbjct: 373 RKIHSQITASGIDADPIVQNSLINMYARSGLLAEAREVFDSILENSKTVVSFTTMISAYA 432

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPK 512
            +G   +AL  F +M   GV PN ITF  +L AC   G +  G  + ++M+  GL     
Sbjct: 433 HNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMIESGLDSSDP 492

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAAS 555
              Y  +VD+  + G L  A  + ++M  + +++ W  ++AA+
Sbjct: 493 FA-YNSLVDMYAKCGDLGFAARVFETMKTK-DLVAWTTIIAAN 533



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 163/315 (51%), Gaps = 5/315 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++++Y  N  P  AL I+  M   G   +  T  T+L AC  +     G  IH   I
Sbjct: 424 FTTMISAYAHNGHPRQALEIFREMTARGVAPNEITFATVLAACVAIGDLASGAWIHERMI 483

Query: 99  KNGLD-GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           ++GLD  D +  N+L+ MY++CG L  A  +F+ M  +D+V+W+T+I    + G    AL
Sbjct: 484 ESGLDSSDPFAYNSLVDMYAKCGDLGFAARVFETMKTKDLVAWTTIIAANVQSGNNRAAL 543

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           ++   M    I P    + +++   A++ D+ +G+ IH   +R+  ++        AL  
Sbjct: 544 DLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHRQALRSKLEQD--AHFQNALAA 601

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY+KCG+L  A +L+ R   + V +WT M++ + +    +  + L+AEM  E V P+E+T
Sbjct: 602 MYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASVALELYAEMESEGVRPNEVT 661

Query: 278 ILSLIIECGFVGGLQLGK-WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
            + ++I C   G +  G+ + H+     G + S      +VD+ G+  ++R A  L D M
Sbjct: 662 FIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFGCMVDVLGRAGKLRDAEELLDSM 721

Query: 337 K-SKDVMIWNAVISA 350
               D + W +++S+
Sbjct: 722 PFYPDEIAWQSLLSS 736



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 111/214 (51%), Gaps = 2/214 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + +++ + +++    +AL++Y  M ++G   D  T+ T+L ACA +    +G++IH 
Sbjct: 523 LVAWTTIIAANVQSGNNRAALDLYDRMLQSGIHPDIATLSTLLVACANLGDLAMGEKIHR 582

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A+++ L+ DA+  NAL  MY++CGSL  A  L+      DV +W++M+  + + GL   
Sbjct: 583 QALRSKLEQDAHFQNALAAMYAKCGSLEKATRLYRRCRGSDVATWTSMLAAHSQQGLASV 642

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           ALE+  EM    +RP+EV  I ++   +    V  G+     +  +   +         +
Sbjct: 643 ALELYAEMESEGVRPNEVTFIPVLISCSQAGLVAEGREFFHSITSDYGSQPSAEHFG-CM 701

Query: 216 IDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMIS 248
           +D+  + G L  A++L + +      ++W  ++S
Sbjct: 702 VDVLGRAGKLRDAEELLDSMPFYPDEIAWQSLLS 735


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 171/462 (37%), Positives = 281/462 (60%), Gaps = 3/462 (0%)

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
           + P       M++    +  +  G+AIHA +  +  ++ L   +   +++MY+KCG+L  
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDL--VLLNFILNMYAKCGSLEE 158

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A+ LF+++    +VSWTV+ISGY +  + +E + LF +M+     P+E T+ SL+   G 
Sbjct: 159 AQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGT 218

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
                 G+ LHA+ L+ G++ ++ + ++L+DMY +   +R A+ +F+ + +K+V+ WNA+
Sbjct: 219 GPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNAL 278

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           I+ +A+    +    LF+ M      P   T   + + C  +G+LE GKW+H ++ K G 
Sbjct: 279 IAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGG 338

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
           +    +   L+DMYAK G +  A ++F   + +DI  WN++++GY  HG G EAL  F  
Sbjct: 339 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQ 398

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           M ++ V+PN ITF+ +L ACSH+GL+ EG+  F+ M     +  ++ H+  +VDLLGRAG
Sbjct: 399 MLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKH-KIEAQVAHHVTVVDLLGRAG 457

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSN 587
            L+EA++ I+ MP++P   VWGALL + ++HKN  +G  AA QI E++P + G +VL+SN
Sbjct: 458 RLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSN 517

Query: 588 IYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           IYA A R +D A VR++MKE  VKKEP  S VE+   VH F+
Sbjct: 518 IYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFV 559



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 217/402 (53%), Gaps = 8/402 (1%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +L  C  +     G+ IH     +  + D  + N ++ MY++CGSL  A+ LFD+MP +D
Sbjct: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKD 170

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           +VSW+ +I GY + G   EAL +  +M  +  +P+E  + S++           G+ +HA
Sbjct: 171 MVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA 230

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
             ++   D  + V + ++L+DMY++  ++  AK +FN L   +VVSW  +I+G+ R  E 
Sbjct: 231 FSLKYGYD--MNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEG 288

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
              +RLF +M+ +   P+  T  S+   C   G L+ GKW+HA+++++G +    + N L
Sbjct: 289 EHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTL 348

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           +DMY K   I+ A+ +F  +  +D++ WN++IS YAQ     +A +LF  M  +KV+PNE
Sbjct: 349 IDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNE 408

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           +T + +L+ C+ +G L+ G++    ++K  +E  V     +VD+  + G +N A +   E
Sbjct: 409 ITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEE 468

Query: 437 -AIYRDICMWNAMMAGYGMH-----GCGEEALIFFVDMERSG 472
             I     +W A++    MH     G      IF +D   SG
Sbjct: 469 MPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSG 510



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 167/316 (52%), Gaps = 3/316 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +  L++ Y ++ + S AL ++  M   G + + FT+ ++LKA       H G+++H 
Sbjct: 171 MVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA 230

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F++K G D + +V ++L+ MY+    +  A+ +F+ +  ++VVSW+ +I G+ R G  E 
Sbjct: 231 FSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEH 290

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            + +  +M      P+     S+ +  A    ++ GK +HA V+++         I   L
Sbjct: 291 VMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPI--AYIGNTL 348

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           IDMY+K G++  AK++F RL +  +VSW  +ISGY +     E ++LF +M++  V P+E
Sbjct: 349 IDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNE 408

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           IT LS++  C   G L  G++    + ++  E  +A    +VD+ G+   +  A    + 
Sbjct: 409 ITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEE 468

Query: 336 MKSKDV-MIWNAVISA 350
           M  K    +W A++ +
Sbjct: 469 MPIKPTAAVWGALLGS 484


>gi|414587709|tpg|DAA38280.1| TPA: hypothetical protein ZEAMMB73_630366 [Zea mays]
          Length = 563

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 201/574 (35%), Positives = 317/574 (55%), Gaps = 23/574 (4%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           M + G+  D FT+P + +A A   +T L    H F I+ G  G+ Y  N L++ Y++ G 
Sbjct: 1   MLRCGARPDAFTLPLLNRASAP--LTSLVGAAHCFGIRVGFGGNVYFGNTLLKAYAQHGM 58

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI----RPSEVAMIS 177
           + +AR +FDEM  RDVVSW+T++  Y      E+  EV R +  M       PS V +  
Sbjct: 59  VAAARLVFDEMRARDVVSWTTLVSAYVNA---EDIWEVSRLLTAMRTHGRCEPSAVTLSV 115

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFN 233
           +  L   + D   GK +       C   K G A    +  +++   S+  +L  A+ LF 
Sbjct: 116 VFRLCTALRDTASGKQLQ------CYAVKRGWAGDFLVLNSMLTHMSRTSSLGDAEMLFK 169

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL 293
           +     +VSW ++IS Y     +++ + L+  MIEE V PS  T+ +++        L  
Sbjct: 170 QSPSRDMVSWNIIISEYSSEGNVSKVISLYVAMIEEEVCPSSETLTAVVSVFARHKFLPH 229

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           GK LH++ +R+G   ++ +A+  VD+Y KC E+ S+  LF+        +W+A+I A+  
Sbjct: 230 GKKLHSFAIRSGLMDTILVAS-FVDLYAKCGELVSSIQLFEEFNGGSKYLWSAMIWAFIY 288

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD--- 410
                 A  LF  M  S   PN   + GLL   TE  AL  GK  H YI +     +   
Sbjct: 289 HGMFLDAIHLFERMMGSFYFPNADILRGLLVSYTEIDALRCGKATHGYIIRNNYAAESES 348

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
             L TALV +YA+CGD++ A R FS  + +DI  W++M+  + +HG G++AL  F  M +
Sbjct: 349 CALDTALVKLYARCGDIHLAERCFSRTLQKDIVSWSSMIEAFTIHGHGKQALTLFNQMLK 408

Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
            GVKPN +TF+ LL+ACSH+GLV+E + +FD M       P++ HY CMVD+LGR+G L+
Sbjct: 409 EGVKPNEVTFLSLLSACSHSGLVSEARELFDCMTKKFRFAPELGHYTCMVDVLGRSGNLE 468

Query: 531 EAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYA 590
           EA ++I +M ++ +  +WGALL + ++H N  +   AA +++E+EP N GY+VL+SNI A
Sbjct: 469 EALQVISNMKVKADGRIWGALLGSCRIHSNSKLAYFAAQKLVELEPSNVGYHVLLSNIQA 528

Query: 591 VANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
             +RW +V  +R  M+ + ++K P +S +   G+
Sbjct: 529 GGDRWAEVEDIRSSMEVMNMEKSPAWSCISDIGV 562



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 173/353 (49%), Gaps = 8/353 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N +++ Y      S  +++Y  M +      + T+  ++   A+      GK++H 
Sbjct: 176 MVSWNIIISEYSSEGNVSKVISLYVAMIEEEVCPSSETLTAVVSVFARHKFLPHGKKLHS 235

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           FAI++GL  D  +  + + +Y++CG LVS+  LF+E        WS MI  +   G+  +
Sbjct: 236 FAIRSGL-MDTILVASFVDLYAKCGELVSSIQLFEEFNGGSKYLWSAMIWAFIYHGMFLD 294

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATA 214
           A+ +   M      P+   +  ++  + ++  +  GKA H  ++R N   E    A+ TA
Sbjct: 295 AIHLFERMMGSFYFPNADILRGLLVSYTEIDALRCGKATHGYIIRNNYAAESESCALDTA 354

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+ +Y++CG++  A++ F+R  Q  +VSW+ MI  +       + + LF +M++E V P+
Sbjct: 355 LVKLYARCGDIHLAERCFSRTLQKDIVSWSSMIEAFTIHGHGKQALTLFNQMLKEGVKPN 414

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS--LAMANALVDMYGKCREIRSARTL 332
           E+T LSL+  C   G +   + L   + +  F F+  L     +VD+ G+   +  A  +
Sbjct: 415 EVTFLSLLSACSHSGLVSEARELFDCMTKK-FRFAPELGHYTCMVDVLGRSGNLEEALQV 473

Query: 333 FDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
              MK K D  IW A++ +  + H   K    F   K+ ++ P+ V    LLS
Sbjct: 474 ISNMKVKADGRIWGALLGS-CRIHSNSK-LAYFAAQKLVELEPSNVGYHVLLS 524


>gi|242079801|ref|XP_002444669.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
 gi|241941019|gb|EES14164.1| hypothetical protein SORBIDRAFT_07g025740 [Sorghum bicolor]
          Length = 581

 Score =  345 bits (885), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 174/459 (37%), Positives = 279/459 (60%), Gaps = 13/459 (2%)

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT----ALIDMYSKCGNLAYAKQLFNRL 235
           S  + +  V +G  +H+  V      KLG+   T    +LI+MYS C   A A+Q+ +  
Sbjct: 101 SATSRLPSVSVGAQLHSLSV------KLGLVSDTFVLNSLINMYSSCSYPATARQVLDSA 154

Query: 236 NQNS--VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL 293
            Q +   VSW  +ISGY+R    N+ ++ F +M++E V   ++T+L+ ++     G +++
Sbjct: 155 PQGACDTVSWNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGKVKV 214

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           G+  H+ ++ NG   +  M ++L+ MY KC  +  AR +F GM  ++V+ W ++IS Y Q
Sbjct: 215 GRLCHSLVVVNGAGINCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMISGYTQ 274

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
                +A  LF  M+++ ++ ++ T+  ++S C + GAL++G+++H Y +  GL  ++ +
Sbjct: 275 LGKFKEAVNLFRDMQITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHGLGKELSV 334

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG- 472
           K +L+DMY+KCGD+N A+ +F     RD+  W AM+ G+ ++G   EAL  F  ME  G 
Sbjct: 335 KNSLIDMYSKCGDINKAHEIFCGLTKRDVFSWTAMIMGFTVNGLCSEALDLFAQMEGEGK 394

Query: 473 VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
           V PN +TF+G+L +CSH GLV +G   F +M     L P+IEHYGCMVDLLGRA LL EA
Sbjct: 395 VMPNEVTFLGVLTSCSHGGLVEQGFHYFQRMSMVYKLAPRIEHYGCMVDLLGRAKLLTEA 454

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVA 592
            + IK+MP+ P+++VW +LL A +      + E  A +ILE+EP+    +VL+SN+YA  
Sbjct: 455 EQFIKNMPIAPDVVVWRSLLFACRACGEVGLAEFVAERILELEPKKCAGHVLLSNVYATT 514

Query: 593 NRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +RW DV  +R  M   R+ K+PG S +EV+G VH+F  G
Sbjct: 515 SRWVDVNELRTSMDNSRMSKQPGCSFIEVDGCVHEFFAG 553



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/409 (31%), Positives = 221/409 (54%), Gaps = 21/409 (5%)

Query: 69  VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYL 128
           +DN+++     A +++    +G ++H  ++K GL  D +V N+LI MYS C    +AR +
Sbjct: 91  LDNYSLNIAFSATSRLPSVSVGAQLHSLSVKLGLVSDTFVLNSLINMYSSCSYPATARQV 150

Query: 129 FDEMPNR--DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            D  P    D VSW+T+I GY RGG+P +AL+   +M    +   +V +++ +   A   
Sbjct: 151 LDSAPQGACDTVSWNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAG 210

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
            V +G+  H+ VV N     +   + ++LI MY+KCG +  A+++F+ +++ +VV WT M
Sbjct: 211 KVKVGRLCHSLVVVN--GAGINCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSM 268

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           ISGY +  +  E V LF +M    +   + TI +++  C  +G L LG+++HAY   +G 
Sbjct: 269 ISGYTQLGKFKEAVNLFRDMQITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHGL 328

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
              L++ N+L+DMY KC +I  A  +F G+  +DV  W A+I  +       +A +LF  
Sbjct: 329 GKELSVKNSLIDMYSKCGDINKAHEIFCGLTKRDVFSWTAMIMGFTVNGLCSEALDLFAQ 388

Query: 367 MK-VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
           M+   KV PNEVT +G+L+ C+  G +E G   H Y ++  +   +  +   ++ Y    
Sbjct: 389 MEGEGKVMPNEVTFLGVLTSCSHGGLVEQG--FH-YFQRMSMVYKLAPR---IEHYGCMV 442

Query: 426 DVNGAYRLFSEA--------IYRDICMWNAMMAGYGMHGCGEEALIFFV 466
           D+ G  +L +EA        I  D+ +W +++  +    CGE  L  FV
Sbjct: 443 DLLGRAKLLTEAEQFIKNMPIAPDVVVWRSLL--FACRACGEVGLAEFV 489



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 186/353 (52%), Gaps = 15/353 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++++ Y++   P+ AL  +  M K    +D+ T+   L A A+     +G+  H   +
Sbjct: 164 WNTIISGYLRGGMPNKALQAFGQMVKEQVTLDDVTLLNALVASAKAGKVKVGRLCHSLVV 223

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            NG   + Y+ ++LI MY++CG +  AR +F  M  R+VV W++MI GY + G  +EA+ 
Sbjct: 224 VNGAGINCYMGSSLISMYAKCGLVEDARKVFHGMHERNVVCWTSMISGYTQLGKFKEAVN 283

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIATALID 217
           + R+M+   ++  +  + ++VS  A +  +DLG+ +HA C V     E   +++  +LID
Sbjct: 284 LFRDMQITGMKVDDGTIATVVSSCAQMGALDLGRYVHAYCDVHGLGKE---LSVKNSLID 340

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI-EENVFPSEI 276
           MYSKCG++  A ++F  L +  V SWT MI G+      +E + LFA+M  E  V P+E+
Sbjct: 341 MYSKCGDINKAHEIFCGLTKRDVFSWTAMIMGFTVNGLCSEALDLFAQMEGEGKVMPNEV 400

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA----NALVDMYGKCREIRSARTL 332
           T L ++  C   G ++ G   H Y  R    + LA        +VD+ G+ + +  A   
Sbjct: 401 TFLGVLTSCSHGGLVEQG--FH-YFQRMSMVYKLAPRIEHYGCMVDLLGRAKLLTEAEQF 457

Query: 333 FDGMK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
              M  + DV++W +++  +A   C +     F+  ++ ++ P +     LLS
Sbjct: 458 IKNMPIAPDVVVWRSLL--FACRACGEVGLAEFVAERILELEPKKCAGHVLLS 508


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 177/457 (38%), Positives = 271/457 (59%), Gaps = 3/457 (0%)

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
           M+S++   A+  DV LG+A+H   V+ C   K        L+DMY+KCG L  A  +F+ 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWK--TTFCNTLLDMYAKCGVLDGAILVFDL 58

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           ++  +VV+WT +I+ Y R    +E +RLF EM  E V P   TI +++  C   G L+ G
Sbjct: 59  MSVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG 118

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
           K +H YI  N  + ++ + NAL+DMY KC  +  A ++F  M  KD++ WN +I  Y++ 
Sbjct: 119 KDVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKN 178

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
              ++A  LF  M V +++P+  T+  +L  C    +L+ GK +H +I + G   D  + 
Sbjct: 179 SLPNEALSLFGDM-VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVA 237

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
            ALVDMY KCG    A  LF     +D+  W  M+AGYGMHG G  A+  F +M ++G++
Sbjct: 238 NALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIE 297

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
           P+ ++FI +L ACSH+GL+ EG   F+ M     + PK+EHY C+VDLL R+G L  A++
Sbjct: 298 PDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYK 357

Query: 535 MIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANR 594
            IKSMP+ P+  +WGALL+  ++H +  + E  A  + E+EP+N GY VL++N YA A +
Sbjct: 358 FIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEK 417

Query: 595 WNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           W +V  +R+ +    +KK PG S +EV   VH F+ G
Sbjct: 418 WEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAG 454



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 203/383 (53%), Gaps = 7/383 (1%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           +IL+ACA      LG+ +HG  +K  +       N L+ MY++CG L  A  +FD M  R
Sbjct: 3   SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVR 62

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
            VV+W+++I  Y R GL +EA+ +  EM    + P    + +++   A    ++ GK +H
Sbjct: 63  TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
             +  N  D +  + +  AL+DMY+KCG++  A  +F  +    ++SW  MI GY + + 
Sbjct: 123 NYIREN--DMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
            NE + LF +M+ E + P   T+  ++  C  +  L  GK +H +ILRNGF     +ANA
Sbjct: 181 PNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
           LVDMY KC     AR LFD + +KD++ W  +I+ Y      + A   F  M+ + + P+
Sbjct: 240 LVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPD 299

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK--TALVDMYAKCGDVNGAYRL 433
           EV+ + +L  C+ +G L+ G W    + +    V   L+    +VD+ A+ G +  AY+ 
Sbjct: 300 EVSFISILYACSHSGLLDEG-WRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKF 358

Query: 434 F-SEAIYRDICMWNAMMAGYGMH 455
             S  I  D  +W A+++G  +H
Sbjct: 359 IKSMPIEPDATIWGALLSGCRIH 381



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 196/382 (51%), Gaps = 14/382 (3%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  + SL+ +Y +      A+ ++  M + G   D FTI T+L ACA       GK+
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H +  +N +  + +V NAL+ MY++CGS+  A  +F EMP +D++SW+TMI GY +  L
Sbjct: 121 VHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVA 210
           P EAL +  +M  ++++P    +  ++   A +A +D GK +H  ++RN    D++    
Sbjct: 181 PNEALSLFGDM-VLEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQ---- 235

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           +A AL+DMY KCG    A+ LF+ +    +++WTVMI+GY      N  +  F EM +  
Sbjct: 236 VANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAG 295

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRN--GFEFSLAMANALVDMYGKCREIRS 328
           + P E++ +S++  C   G L  G W    ++++    +  L     +VD+  +  ++  
Sbjct: 296 IEPDEVSFISILYACSHSGLLDEG-WRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAM 354

Query: 329 ARTLFDGMK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP-NEVTMVGLLSLC 386
           A      M    D  IW A++S     H +  A ++  H  V ++ P N    V L +  
Sbjct: 355 AYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEH--VFELEPENTGYYVLLANTY 412

Query: 387 TEAGALEMGKWLHTYIEKQGLE 408
            EA   E  K L   I ++GL+
Sbjct: 413 AEAEKWEEVKKLRQKIGRRGLK 434


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 214/622 (34%), Positives = 319/622 (51%), Gaps = 43/622 (6%)

Query: 38  RYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           R N  +T++++  + + A  ++A M +  +   N  +          L   L + I    
Sbjct: 40  RSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP--- 96

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
                  D Y  N L+   +   SL  AR LFDEMP RD V+++ MI  +   GL     
Sbjct: 97  -----RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGL----- 146

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            V     + D+ P + A +S   + A  A V  G+   A  + N + E   ++   AL+ 
Sbjct: 147 -VSLARHYFDLAPEKDA-VSWNGMLA--AYVRNGRVEEARGLFNSRTEWDAISW-NALMS 201

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
            Y + G ++ A++LF+R+    VVSW +M+SGY R  ++ E  RLF      +VF +   
Sbjct: 202 GYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF-TWTA 260

Query: 278 ILSLIIECGFV-------------GGLQLGKWLHAYILRNGFEFS-----------LAMA 313
           ++S   + G +               +     + AYI R   + +           +A  
Sbjct: 261 VVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASW 320

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           N ++  Y +   +  A+ +FD M  KD + W A+++AY+Q  C ++  +LFI M      
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
            N      +LS C +  ALE G  LH  + + G  V   +  AL+ MY KCG++  A   
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 440

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F E   RD+  WN M+AGY  HG G+EAL  F  M  +  KP+ IT +G+L ACSH+GLV
Sbjct: 441 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            +G S F  M H  G+  K EHY CM+DLLGRAG L EAH+++K MP  P+  +WGALL 
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLG 560

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           AS++H+NP +G  AA +I E+EP+N G  VL+SNIYA + +W D   +R +M+E  VKK 
Sbjct: 561 ASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKV 620

Query: 614 PGFSSVEVNGLVHKFIRGGMVN 635
           PGFS +EV   VH F  G  V+
Sbjct: 621 PGFSWIEVQNKVHTFSAGDCVH 642



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 21/226 (9%)

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
           LE +VI     +  + + G V  A RLF+    R    +NAM+AGY  +G     L    
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG----RLPLAA 89

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRA 526
            + R+  +P+  ++  LL+A + +  + + + +FD+M      V     Y  M+      
Sbjct: 90  SLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMP-----VRDSVTYNVMISSHANH 144

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMS 586
           GL+  A       P + + + W  +LAA    +N  + E         E     +N LMS
Sbjct: 145 GLVSLARHYFDLAPEK-DAVSWNGMLAA--YVRNGRVEEARGLFNSRTEWDAISWNALMS 201

Query: 587 NIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
                  +W  ++  R +   +     PG   V  N +V  + R G
Sbjct: 202 GYV----QWGKMSEARELFDRM-----PGRDVVSWNIMVSGYARRG 238


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  345 bits (884), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 197/618 (31%), Positives = 325/618 (52%), Gaps = 17/618 (2%)

Query: 29  YTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH 88
           +  +   L  +N+ + +  ++     AL ++  M+  G      T+   L  CA++    
Sbjct: 186 FERMERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAKIRQA- 244

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
             + IH    ++GL+    VS AL   Y+  G L  A+ +FD    RDVVSW+ M+  Y 
Sbjct: 245 --RAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYA 302

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           + G   EA  +   M    I PS+V   ++V+     + +  G+ IHAC +    D    
Sbjct: 303 QHGHMSEAALLFARMLHEGIPPSKV---TLVNASTGCSSLRFGRMIHACALEKGLDRD-- 357

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           + +  AL+DMY++CG+   A+ LF  +  N+V SW  MI+G  +  ++   + LF  M  
Sbjct: 358 IVLGNALLDMYTRCGSPEEARHLFEGIPGNAV-SWNTMIAGSSQKGQMKRALELFQRMQL 416

Query: 269 ENVFPSEITILSLIIECGF----VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           E + P   T L+L+            +  G+ LH+ I+  G+    A+  A+V MY  C 
Sbjct: 417 EGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCG 476

Query: 325 EIRSARTLFD--GMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
            I  A   F    M+ + DV+ WNA+IS+ +Q     +A   F  M +  V PN++T V 
Sbjct: 477 AIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVA 536

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYR 440
           +L  C  A AL  G  +H ++   G+E +V + TAL  MY +CG +  A  +F + A+ R
Sbjct: 537 VLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVER 596

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           D+ ++NAM+A Y  +G   EAL  F  M++ G +P+  +F+ +L+ACSH GL  EG  +F
Sbjct: 597 DVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIF 656

Query: 501 DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
             M    G+ P  +HY C VD+LGRAG L +A E+I+ M ++P ++VW  LL A + +++
Sbjct: 657 RSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRD 716

Query: 561 PSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
              G +A + + E++P +    V++SNI A A +W++ A VR  M+   ++K+ G S +E
Sbjct: 717 VDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKSWIE 776

Query: 621 VNGLVHKFIRGGMVNWKS 638
           +   VH+F+ G   + +S
Sbjct: 777 IKSRVHEFVAGDRSHPRS 794



 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 162/523 (30%), Positives = 286/523 (54%), Gaps = 18/523 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++T+Y ++ +   A+ ++  M++ G   D  T   +LKACA++     G+ IH + +
Sbjct: 96  WTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIV 155

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++GL+G + ++N L+ +Y  CG + SA  LF+ M  RD+VSW+  I    + G  + ALE
Sbjct: 156 ESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALE 214

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + + M+   +RP+ + ++  +S+ A +      +AIH+ V  +  ++ L   ++TAL   
Sbjct: 215 LFQRMQLEGVRPARITLVITLSVCAKIRQ---ARAIHSIVRESGLEQTL--VVSTALASA 269

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y++ G+L  AK++F+R  +  VVSW  M+  Y +   ++E   LFA M+ E + PS++T+
Sbjct: 270 YARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTL 329

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           ++    C     L+ G+ +HA  L  G +  + + NAL+DMY +C     AR LF+G+  
Sbjct: 330 VNASTGC---SSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG 386

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT----EAGALEM 394
             V  WN +I+  +Q   + +A ELF  M++  + P   T + LL        EA A+  
Sbjct: 387 NAVS-WNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAE 445

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR---DICMWNAMMAG 451
           G+ LH+ I   G   +  + TA+V MYA CG ++ A   F         D+  WNA+++ 
Sbjct: 446 GRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISS 505

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
              HG G+ AL FF  M+  GV PN IT + +L+AC+ A  +TEG  V D + H  G+  
Sbjct: 506 LSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHS-GMES 564

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            +     +  + GR G L+ A E+ + + +  +++++ A++AA
Sbjct: 565 NVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 247/489 (50%), Gaps = 21/489 (4%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +L+A     +   G+ IH   +  GL+ +  + N L+++Y +C SL     +F  +  RD
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKCESLGDVEEVFSRLEVRD 92

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
             SW+T+I  Y   G  + A+ +   M+   +R   V  ++++   A + D+  G++IHA
Sbjct: 93  EASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
            +V +  + K    +A  L+ +Y  CG +A A  LF R+ ++ +VSW   I+   +  ++
Sbjct: 153 WIVESGLEGK--SVLANLLLHIYGSCGCVASAMLLFERMERD-LVSWNAAIAANAQSGDL 209

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
           +  + LF  M  E V P+ IT   L+I       ++  + +H+ +  +G E +L ++ AL
Sbjct: 210 DMALELFQRMQLEGVRPARIT---LVITLSVCAKIRQARAIHSIVRESGLEQTLVVSTAL 266

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
              Y +   +  A+ +FD    +DV+ WNA++ AYAQ   + +A  LF  M    + P++
Sbjct: 267 ASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSK 326

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           VT+V   + C+   +L  G+ +H    ++GL+ D++L  AL+DMY +CG    A  LF E
Sbjct: 327 VTLVNASTGCS---SLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLF-E 382

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS----HAGL 492
            I  +   WN M+AG    G  + AL  F  M+  G+ P   T++ LL A +     A  
Sbjct: 383 GIPGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARA 442

Query: 493 VTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK--SMPLRPNMIVWG 549
           + EG+ +  ++V  G    P I     +V +    G +DEA    +  +M  R +++ W 
Sbjct: 443 MAEGRKLHSRIVSCGYASEPAIG--TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWN 500

Query: 550 ALLAASKLH 558
           A++++   H
Sbjct: 501 AIISSLSQH 509


>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
          Length = 654

 Score =  344 bits (883), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 202/607 (33%), Positives = 306/607 (50%), Gaps = 54/607 (8%)

Query: 26  KFSYTNIINP-LTRYNSLVTSYIKNNKPSSA--LNIYAFMRKNGSEVDNFTIPTILKACA 82
           KF +  I N  +  +N ++  Y ++    S+  + ++  MR   +  +  T   +  A +
Sbjct: 60  KFVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAS 119

Query: 83  QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
            ++    G+  H  AIK     D +V ++L+ MY + G    AR +FD MP R+ VSW+T
Sbjct: 120 TLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWAT 179

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           MI GY    L  EAL + R MR  +   +E    S++S       V+ GK IH   V+N 
Sbjct: 180 MISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNG 239

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
                 V++  AL+ MY+KCG+L  A Q F   +  + ++W+ MI+G  +  + ++ ++L
Sbjct: 240 LLSI--VSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKL 297

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F+ M    + PSE T + +I  C  +G    GK +H Y+L+ GFE  + +  ALVDMY K
Sbjct: 298 FSSMHLSGIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAK 357

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
           C  I  AR  FD ++  D+++W ++I  Y Q    + A  L+  M++  + PNE+TM  +
Sbjct: 358 CSSIVDARKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASV 417

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
           L  C+   ALE GK +H    K G  ++V + +AL  MYAKCG +     +F     RD+
Sbjct: 418 LKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDV 477

Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
             WNAM++G   +GCG+EAL  F +M+  G KP+ +TF+ +L+ACSH GLV  G   F  
Sbjct: 478 ISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRM 537

Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
           M    G+ P++EHY CMVD+L RAG L EA E  +S  +   M                 
Sbjct: 538 MFDEFGMDPRVEHYACMVDILSRAGKLKEAIEFTESATIDHGM----------------- 580

Query: 563 MGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
                                           W DV  VRR+MK   V KEPG S +E+ 
Sbjct: 581 --------------------------------WEDVERVRRMMKLRGVSKEPGCSWIELK 608

Query: 623 GLVHKFI 629
             VH F+
Sbjct: 609 SGVHVFV 615



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 146/315 (46%), Gaps = 7/315 (2%)

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
             PS  +  + +++      LQ GK LHA I+++     + +AN+LV++Y KC+ +R A+
Sbjct: 2   TLPSNRSFFTALLQYTHNRSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAK 60

Query: 331 TLFDGMKSKDVMIWNAVISAYAQ--AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
            +F+ +++KDV+ WN +I+ Y+Q          ELF  M+     PN  T  G+ +  + 
Sbjct: 61  FVFERIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAAST 120

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
                 G+  H    K     DV + ++L++MY K G    A ++F     R+   W  M
Sbjct: 121 LVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATM 180

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           ++GY       EAL  F  M R     N   F  +L+A +   LV  GK +    V   G
Sbjct: 181 ISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKN-G 239

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA--ASKLHKNPSMGEI 566
           L+  +     +V +  + G LD+A +  ++   + N I W A++   A     + ++   
Sbjct: 240 LLSIVSVGNALVTMYAKCGSLDDALQTFETSSDK-NSITWSAMITGXAQSGDSDKALKLF 298

Query: 567 AATQILEIEPQNYGY 581
           ++  +  I P  + +
Sbjct: 299 SSMHLSGIRPSEFTF 313


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  344 bits (883), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 199/596 (33%), Positives = 323/596 (54%), Gaps = 6/596 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++++  +N     +   + +MR    E++  T+  +L  C  V     GK +HG A+
Sbjct: 229 WNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAV 288

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL+ +  + N L+ +YS+ G    A  +F  MP RD++SW++M+  Y + G    AL+
Sbjct: 289 KYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALK 348

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIATALID 217
           V  EM +M    + V   S ++   D      GK +H   VV   +DE   + I   LI 
Sbjct: 349 VFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDE---LIIGNTLIT 405

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE-I 276
            Y KC  +A AK++F R+ +   V+W  +I G+    E+NE V  F  M E +    + I
Sbjct: 406 FYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYI 465

Query: 277 TILSLIIECGFVGGL-QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           TI++++  C     L + G  +HA+ +  GF+    + ++L+ MY KC ++ S+  +FD 
Sbjct: 466 TIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQ 525

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +  K   +WNA+I+A A+    ++A +L + M+ + +  ++      LS+  +   LE G
Sbjct: 526 LVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEG 585

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + LH    K G E+D  +  A +DMY KCG+++ A R+  +   R    WN +++    H
Sbjct: 586 QQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARH 645

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G   +A   F DM + GVKPN ++F+ LL+ACSH GLV EG + +  M    G+ P IEH
Sbjct: 646 GQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEH 705

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
             CM+DLLGR+G L EA   I  MP+ PN +VW +LLA+ ++++N  +G  AA  +LE++
Sbjct: 706 CVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELD 765

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           P +    VL SN++A   RW DV  VR  M   +++K+P  S V+  G +  F  G
Sbjct: 766 PSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMG 821



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 147/580 (25%), Positives = 281/580 (48%), Gaps = 23/580 (3%)

Query: 24  HFKFSYTNIINPLTRYN-----------SLVTSYIKNNKPSSALNIYAFMRKNGSEVDNF 72
           HF  SY  + N    +N           SL+ SY  N      +N Y  MR  G   +  
Sbjct: 102 HFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNEN 161

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
            I  ++ +C  ++   LG ++ G A+K GL+     +N+LI M+  CG +  A  +F+EM
Sbjct: 162 NIALVISSCGFLMDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEM 221

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
             RD +SW+++I    +  L EE+      MR +    +   +  ++S+   V  +  GK
Sbjct: 222 NERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGK 281

Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
            +H   V+   +    + +   L+ +YS  G    A+ +F R+ +  ++SW  M++ Y++
Sbjct: 282 GVHGLAVKYGLESN--ICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQ 339

Query: 253 CNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAM 312
                  +++FAEM+      + +T  S +  C        GK LH +++  G +  L +
Sbjct: 340 DGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELII 399

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV-SK 371
            N L+  YGKC ++  A+ +F  M   D + WNA+I  +A    +++A   F  M+  S 
Sbjct: 400 GNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGST 459

Query: 372 VRPNEVTMVGLLSLC-TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
              + +T+V +L  C T    ++ G  +H +    G ++D  ++++L+ MYAKCGD++ +
Sbjct: 460 SGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSS 519

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
             +F + +++   +WNA++A    +G GEEAL   V M  +G++ +   F   L+  +  
Sbjct: 520 SYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADL 579

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHY--GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
            ++ EG+ +    +  LG   +++H+     +D+ G+ G LD+A  ++   P   + + W
Sbjct: 580 AMLEEGQQLHGSTIK-LGF--ELDHFIINAAMDMYGKCGELDDALRILPQ-PTDRSRLSW 635

Query: 549 GALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMS 586
             L++ S  H      +     +L+  ++P +  +  L+S
Sbjct: 636 NTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLS 675



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/523 (26%), Positives = 256/523 (48%), Gaps = 13/523 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV-LMTHLGKEIHGFA 97
           +N +++ Y++      A+  +  +   G +   F I +++ AC +  +M   G + HGFA
Sbjct: 26  WNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMIASLVTACNKSSIMAKEGFQFHGFA 85

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           IK GL  D +V  + +  Y+  G + +A+ +F+EMP+R+VVSW++++  Y   G  +E +
Sbjct: 86  IKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVI 145

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
              + MR   I  +E  +  ++S    + D+ LG  +    ++   + K  V+ A +LI 
Sbjct: 146 NTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGLETK--VSAANSLIF 203

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM--IEENVFPSE 275
           M+  CG++  A  +FN +N+   +SW  +IS   +     E  R F  M  + E +  + 
Sbjct: 204 MFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRLVHEEINYTT 263

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           ++IL  I  CG V  L+ GK +H   ++ G E ++ + N L+ +Y      + A  +F  
Sbjct: 264 LSILLSI--CGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRR 321

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M  +D++ WN++++ Y Q      A ++F  M   K   N VT    L+ C +      G
Sbjct: 322 MPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNG 381

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           K LH ++   GL+ ++I+   L+  Y KC  +  A ++F      D   WNA++ G+  +
Sbjct: 382 KILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANN 441

Query: 456 GCGEEALIFFVDM-ERSGVKPNGITFIGLLNAC-SHAGLVTEGKSVF-DKMVHGLGLVPK 512
               EA+  F  M E S    + IT + +L +C +H  L+  G  +    +V G  L   
Sbjct: 442 AELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQH 501

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAAS 555
           ++    ++ +  + G L  +  +   +  + +  VW A++AA+
Sbjct: 502 VQ--SSLITMYAKCGDLHSSSYIFDQLVFKTSS-VWNAIIAAN 541



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 228/476 (47%), Gaps = 17/476 (3%)

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           MYS+ G +  A+ +FD M  R+  SW+ M+ GY R G   EA+   R++  + I+PS   
Sbjct: 1   MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60

Query: 175 MISMV------SLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYA 228
           + S+V      S+ A       G AI   ++ +       V + T+ +  Y+  G ++ A
Sbjct: 61  IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYD-------VFVGTSFVHFYASYGIVSNA 113

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
           +++FN +   +VVSWT ++  Y       E +  +  M  E +  +E  I  +I  CGF+
Sbjct: 114 QKMFNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFL 173

Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
             + LG  L  + L+ G E  ++ AN+L+ M+G C +I  A ++F+ M  +D + WN++I
Sbjct: 174 MDIILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSII 233

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
           SA AQ    +++F  F  M++     N  T+  LLS+C     L+ GK +H    K GLE
Sbjct: 234 SANAQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLE 293

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            ++ L   L+ +Y+  G    A  +F     RD+  WN+M+A Y   G    AL  F +M
Sbjct: 294 SNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEM 353

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
                + N +TF   L AC      T GK +    V  LGL  ++     ++   G+   
Sbjct: 354 LWMKKEINYVTFTSALAACLDPEFFTNGK-ILHGFVVVLGLQDELIIGNTLITFYGKCHK 412

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVL 584
           + EA ++ + MP + + + W AL+       N  + E  A   L  E    G + +
Sbjct: 413 MAEAKKVFQRMP-KLDKVTWNALIGG--FANNAELNEAVAAFKLMREGSTSGVDYI 465


>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  344 bits (883), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 183/475 (38%), Positives = 272/475 (57%), Gaps = 37/475 (7%)

Query: 192 KAIHACVVR---NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
           K  H+ ++R   +  ++ +G  I    I   SK G+L YA ++F+++       +  +  
Sbjct: 37  KQYHSQIIRLGLSADNDAMGRVIKFCAI---SKSGDLNYALEVFDKIPHPDAYIYNTIFR 93

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
           GY+R       + +++ M+ ++V P++ T   LI  C     ++ GK +HA++L+ GF  
Sbjct: 94  GYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGA 153

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW------------------------ 344
                N L+ MY   + +  AR +FD M  +DV+ W                        
Sbjct: 154 DGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMP 213

Query: 345 -------NAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
                  NA+I+AY Q++ + +AF LF  M++  V  ++     +LS CT  GALE GKW
Sbjct: 214 ERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKW 273

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H YIEK G+E+D  L T ++DMY KCG +  A  +F+E   + I  WN M+ G  MHG 
Sbjct: 274 IHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGK 333

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           GE A+  F +MER  V P+GITF+ +L+AC+H+GLV EGK  F  M   LGL P +EH+G
Sbjct: 334 GEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFG 393

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVDLLGRAGLL+EA ++I  MP+ P+  V GAL+ A ++H N  +GE    +++E+EP 
Sbjct: 394 CMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKVIELEPH 453

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
           N G  VL++N+YA A RW DVA VR++M +  VKK PGFS +E    V +FI GG
Sbjct: 454 NSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESESGVDEFIAGG 508



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 185/402 (46%), Gaps = 33/402 (8%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           K+ H   I+ GL  D      +I+    S+ G L  A  +FD++P+ D   ++T+ RGY 
Sbjct: 37  KQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYNTIFRGYL 96

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV--------- 199
           R  L    + +   M    + P++     ++        ++ GK IHA V+         
Sbjct: 97  RWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGF 156

Query: 200 ------------------RNCKDE--KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
                             R   D   +  V   T+LI  YS+ G +  A+++F  + + +
Sbjct: 157 SLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVFELMPERN 216

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
            VSW  MI+ Y++ N ++E   LF  M  ENV   +    S++  C  +G L+ GKW+H 
Sbjct: 217 SVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHG 276

Query: 300 YILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
           YI ++G E    +A  ++DMY KC  +  A  +F+ +  K +  WN +I   A     + 
Sbjct: 277 YIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEA 336

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI-EKQGLEVDVILKTALV 418
           A ELF  M+   V P+ +T V +LS C  +G +E GK    Y+ E  GL+  +     +V
Sbjct: 337 AIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMV 396

Query: 419 DMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHGCGE 459
           D+  + G +  A +L +E  +  D  +  A++    +HG  E
Sbjct: 397 DLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTE 438



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 157/345 (45%), Gaps = 35/345 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN++   Y++     + + +Y+ M       + FT P +++AC        GK+IH   +
Sbjct: 88  YNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVL 147

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG------- 151
           K G   D +  N LI MY    SL  AR +FD MP RDVVSW+++I GY + G       
Sbjct: 148 KFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKARE 207

Query: 152 ----LPE--------------------EALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
               +PE                    EA  +   MR  ++   +    SM+S    +  
Sbjct: 208 VFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGA 267

Query: 188 VDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
           ++ GK IH  + ++  +  L   +AT +IDMY KCG L  A ++FN L Q  + SW  MI
Sbjct: 268 LEQGKWIHGYIEKSGIE--LDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMI 325

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GF 306
            G     +    + LF EM  E V P  IT ++++  C   G ++ GK    Y+    G 
Sbjct: 326 GGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGL 385

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
           +  +     +VD+ G+   +  AR L + M  + D  +  A++ A
Sbjct: 386 KPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGA 430


>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  344 bits (883), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 183/471 (38%), Positives = 273/471 (57%), Gaps = 37/471 (7%)

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           IHA + R+  D      +   L   Y+  G L Y+  LF R    SV  WT +I G+   
Sbjct: 49  IHAVLFRHGLDHH--PILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALR 106

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
               + +  +A+M+ + V P+  T  S++  C     ++ GK LH+  ++ GF+  L + 
Sbjct: 107 GLHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVR 162

Query: 314 NALVDMYG-------------------------------KCREIRSARTLFDGMKSKDVM 342
             L+D+Y                                K  E+ +AR LFDGM+ +D +
Sbjct: 163 TGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGV 222

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
            WN +I  Y Q    ++A  LF  M  +K +PNEVT++ +LS C + GALE G+W+H+YI
Sbjct: 223 CWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI 282

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
           E  G++ +V + TALVDMY+KCG +  A  +F +   +D+  WN+M+ GY MHG  +EAL
Sbjct: 283 ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEAL 342

Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDL 522
             F  M R G+ P  ITFIG+L+AC H+G VTEG  +F+KM    G+ PKIEHYGCMV+L
Sbjct: 343 QLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNL 402

Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYN 582
           LGRAG +++A+E++K+M + P+ ++WG LL A +LH   ++GE     +++    N G  
Sbjct: 403 LGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTY 462

Query: 583 VLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGM 633
           +L+SNIYA    W+ VA +R +MK+  VKKEPG SS+EVN  VH+F+ GG+
Sbjct: 463 ILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGL 513



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 212/437 (48%), Gaps = 48/437 (10%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           +IH    ++GLD    ++  L + Y+  G L  +  LF    N  V  W+ +I G+   G
Sbjct: 48  QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
           L E+AL    +M    + P+     S++ L      ++ GKA+H+  V+   D  L   +
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKL----CPIEPGKALHSQAVKLGFDSDL--YV 161

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVS----------------------------- 242
            T L+D+Y++ G++  A+QLF+ + + S+VS                             
Sbjct: 162 RTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDG 221

Query: 243 --WTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
             W VMI GY +    NE + LF  M++    P+E+T+LS++  CG +G L+ G+W+H+Y
Sbjct: 222 VCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSY 281

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           I  NG +F++ +  ALVDMY KC  +  AR +FD +  KDV+ WN++I  YA      +A
Sbjct: 282 IENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEA 341

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW--LHTYIEKQGLEVDVILKTALV 418
            +LF  M    + P  +T +G+LS C  +G +  G W   +   ++ G+E  +     +V
Sbjct: 342 LQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEG-WDIFNKMKDEYGIEPKIEHYGCMV 400

Query: 419 DMYAKCGDVNGAYRLFSEA-IYRDICMWNAMMAGYGMHG---CGEEALIFFVDMERSGVK 474
           ++  + G V  AY L     I  D  +W  ++    +HG    GE+ +   VD   +   
Sbjct: 401 NLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLA--- 457

Query: 475 PNGITFIGLLNACSHAG 491
            N  T+I L N  +  G
Sbjct: 458 -NSGTYILLSNIYAAVG 473



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 187/411 (45%), Gaps = 71/411 (17%)

Query: 54  SALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALI 113
            ALN YA M   G E + FT  +ILK C        GK +H  A+K G D D YV   L+
Sbjct: 111 QALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLL 166

Query: 114 QMYSECGSLVSARYLFDEMP-------------------------------NRDVVSWST 142
            +Y+  G +VSA+ LFD MP                                RD V W+ 
Sbjct: 167 DVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNV 226

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           MI GY + G+P EAL + R M     +P+EV ++S++S    +  ++ G+ +H+ +  N 
Sbjct: 227 MIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENN- 285

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
              +  V + TAL+DMYSKCG+L  A+ +F++++   VV+W  MI GY       E ++L
Sbjct: 286 -GIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQL 344

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F  M    + P+ IT + ++  CG  G +  G W               + N + D YG 
Sbjct: 345 FKSMCRMGLHPTNITFIGILSACGHSGWVTEG-W--------------DIFNKMKDEYGI 389

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
             +I                 +  +++   +A  +++A+EL  +M    + P+ V    L
Sbjct: 390 EPKIEH---------------YGCMVNLLGRAGHVEQAYELVKNM---NIEPDPVLWGTL 431

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           L  C   G + +G+ +   +  Q L  +      L ++YA  G+ +G  RL
Sbjct: 432 LGACRLHGKIALGEKIVELLVDQNL-ANSGTYILLSNIYAAVGNWDGVARL 481



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 127/245 (51%), Gaps = 8/245 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y +N  P+ AL ++  M K  ++ +  T+ ++L AC Q+     G+ +H +  
Sbjct: 224 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 283

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            NG+  + +V  AL+ MYS+CGSL  AR +FD++ ++DVV+W++MI GY   G  +EAL+
Sbjct: 284 NNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQ 343

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE---KLGVAIATAL 215
           + + M  M + P+ +  I ++S       V  G  I        KDE   +  +     +
Sbjct: 344 LFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDI----FNKMKDEYGIEPKIEHYGCM 399

Query: 216 IDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           +++  + G++  A +L   +N +   V W  ++       +I  G ++   ++++N+  S
Sbjct: 400 VNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANS 459

Query: 275 EITIL 279
              IL
Sbjct: 460 GTYIL 464


>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g56570-like [Brachypodium distachyon]
          Length = 564

 Score =  344 bits (883), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 188/527 (35%), Positives = 294/527 (55%), Gaps = 14/527 (2%)

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDI 168
           +  LI+     G+L  AR +FDEMP+RDVV+W+ M+ GY   G    AL++ R M    +
Sbjct: 6   ATTLIKSLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAGV 65

Query: 169 RPSEVAMISMVSLFADVADVDLG---KAIHACVVRNCKDEKLGVAIATALIDMYSKCGN- 224
            P+E  + S+++     A  D G    ++HA  VR   D      +  ALI+ Y+ C   
Sbjct: 66  GPNEFTLSSVLTACRGGA-ADGGCEPSSLHAVAVRRGVDHM--PYVVNALIEAYASCEEG 122

Query: 225 --LAYAKQLFNRLNQ-NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
             +  +++LF+ L    +  SWT M++GY R  +   G++LF  MI++ +  S  T    
Sbjct: 123 VGVEESRKLFDALGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIA 182

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +  C  +  L +G+ LH   LR  F  +L +AN+L+DMY  C  +  AR LFD +  +++
Sbjct: 183 LHACASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNL 242

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           + WN +I+ Y+Q + +  A +L   M +   +PN  T+  + S C    +L  G+ +H  
Sbjct: 243 VTWNTMIAWYSQCNHL-MALQLLREMNL---QPNCFTLTSITSACAGLASLRFGQQVHGA 298

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
             ++    D+ +  ALVDMY+KCG +  A ++F+   Y+D   W +M+ GYGM+G   E+
Sbjct: 299 ALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANES 358

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVD 521
           +  F  M  +GV P+ + F+GL+ AC+H GLV EG + F  M     L P  E YGC+ +
Sbjct: 359 IQLFTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYGCVTN 418

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGY 581
           LL RAG L EA ++I  MP  P+  VWGALL A K+HKN  +G +AA +I+EI P     
Sbjct: 419 LLARAGRLREAFDLIHRMPFAPDETVWGALLGACKMHKNVELGRLAARKIIEINPDRAKT 478

Query: 582 NVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
            VL++NIYA  N+W + A  RR+++ I  +KE G S ++V   ++ F
Sbjct: 479 YVLLANIYAAGNKWGEYADTRRLLRGIGSRKEAGTSWIDVTDKIYSF 525



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 217/426 (50%), Gaps = 16/426 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE---IHG 95
           + ++++ Y  N   S AL+++  M   G   + FT+ ++L AC +      G E   +H 
Sbjct: 37  WTAMLSGYASNGCHSYALDLFRRMLAAGVGPNEFTLSSVLTAC-RGGAADGGCEPSSLHA 95

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLV---SARYLFDEM-PNRDVVSWSTMIRGYHRGG 151
            A++ G+D   YV NALI+ Y+ C   V    +R LFD +   R   SW++M+ GY R G
Sbjct: 96  VAVRRGVDHMPYVVNALIEAYASCEEGVGVEESRKLFDALGSGRTAASWTSMVAGYSRWG 155

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
             +  L++ + M    I  S       +   A +A++ +G+ +H   +R   +  L   +
Sbjct: 156 QEQTGLQLFQTMIQDGIELSPFTCSIALHACASIANLCVGQQLHVLCLRKAFNANL--TV 213

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
           A +LIDMY  C NL  A++LF+ + + ++V+W  MI+ Y +CN +   ++L  EM   N+
Sbjct: 214 ANSLIDMYCSCANLLDARRLFDEIPERNLVTWNTMIAWYSQCNHL-MALQLLREM---NL 269

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P+  T+ S+   C  +  L+ G+ +H   LR  +   L M NALVDMY KC  I +A+ 
Sbjct: 270 QPNCFTLTSITSACAGLASLRFGQQVHGAALRRNYGKDLQMCNALVDMYSKCGSIANAKK 329

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +F+ M  KD + W ++I+ Y      +++ +LF  M  + V P+ V  +GL+  C   G 
Sbjct: 330 MFNMMDYKDKLSWTSMITGYGMNGYANESIQLFTSMIHAGVHPDHVVFLGLICACNHGGL 389

Query: 392 LEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMM 449
           ++ G  +  +   +  L+ +  +   + ++ A+ G +  A+ L     +  D  +W A++
Sbjct: 390 VDEGWNFFRSMTSEYNLQPNKEIYGCVTNLLARAGRLREAFDLIHRMPFAPDETVWGALL 449

Query: 450 AGYGMH 455
               MH
Sbjct: 450 GACKMH 455



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 181/358 (50%), Gaps = 39/358 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + S+V  Y +  +  + L ++  M ++G E+  FT    L ACA +    +G+++H   +
Sbjct: 144 WTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALHACASIANLCVGQQLHVLCL 203

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +   + +  V+N+LI MY  C +L+ AR LFDE+P R++V+W+TMI  Y +      AL+
Sbjct: 204 RKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVTWNTMIAWYSQCN-HLMALQ 262

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++RE   M+++P+   + S+ S  A +A +  G+ +H   +R    + L   +  AL+DM
Sbjct: 263 LLRE---MNLQPNCFTLTSITSACAGLASLRFGQQVHGAALRRNYGKDL--QMCNALVDM 317

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSKCG++A AK++FN ++    +SWT MI+GY      NE ++LF  MI   V P  +  
Sbjct: 318 YSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANESIQLFTSMIHAGVHPDHVVF 377

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           L LI  C            H  ++  G+ F                  RS  + ++   +
Sbjct: 378 LGLICACN-----------HGGLVDEGWNF-----------------FRSMTSEYNLQPN 409

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           K+  I+  V +  A+A  + +AF+L   M  +   P+E     LL  C     +E+G+
Sbjct: 410 KE--IYGCVTNLLARAGRLREAFDLIHRMPFA---PDETVWGALLGACKMHKNVELGR 462



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 78/144 (54%), Gaps = 4/144 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++  Y + N     L     +R+   + + FT+ +I  ACA +     G+++HG
Sbjct: 242 LVTWNTMIAWYSQCNH----LMALQLLREMNLQPNCFTLTSITSACAGLASLRFGQQVHG 297

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            A++     D  + NAL+ MYS+CGS+ +A+ +F+ M  +D +SW++MI GY   G   E
Sbjct: 298 AALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANE 357

Query: 156 ALEVMREMRFMDIRPSEVAMISMV 179
           ++++   M    + P  V  + ++
Sbjct: 358 SIQLFTSMIHAGVHPDHVVFLGLI 381


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  344 bits (882), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 215/622 (34%), Positives = 318/622 (51%), Gaps = 43/622 (6%)

Query: 38  RYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           R N  +T++++  + + A  ++A M +  +   N  +          L   L + I    
Sbjct: 40  RSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP--- 96

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
                  D Y  N L+   +   SL  AR LFDEMP RD V+++ MI  +   GL     
Sbjct: 97  -----RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGL----- 146

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            V     + D+ P + A +S   + A  A V  G+   A  + N + E   V    AL+ 
Sbjct: 147 -VSLARHYFDLAPEKDA-VSWNGMLA--AYVRNGRVEEARGLFNSRTE-WDVISWNALMS 201

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
            Y + G ++ A++LF+R+    VVSW +M+SGY R  ++ E  RLF      +VF +   
Sbjct: 202 GYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF-TWTA 260

Query: 278 ILSLIIECGFV-------------GGLQLGKWLHAYILRNGFEFS-----------LAMA 313
           ++S   + G +               +     + AYI R   + +           +A  
Sbjct: 261 VVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASW 320

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           N ++  Y +   +  A+ +FD M  KD + W A+++AY+Q  C ++  +LFI M      
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
            N      +LS C +  ALE G  LH  + + G  V   +  AL+ MY KCG++  A   
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 440

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F E   RD+  WN M+AGY  HG G+EAL  F  M  +  KP+ IT +G+L ACSH+GLV
Sbjct: 441 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            +G S F  M H  G+  K EHY CM+DLLGRAG L EAH+++K MP  P+  +WGALL 
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLG 560

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           AS++H+NP +G  AA +I E+EP+N G  VL+SNIYA + +W D   +R +M+E  VKK 
Sbjct: 561 ASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKV 620

Query: 614 PGFSSVEVNGLVHKFIRGGMVN 635
           PGFS +EV   VH F  G  V+
Sbjct: 621 PGFSWIEVQNKVHTFSAGDCVH 642



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 21/226 (9%)

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
           LE +VI     +  + + G V  A RLF+    R    +NAM+AGY  +G     L    
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG----RLPLAA 89

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRA 526
            + R+  +P+  ++  LL+A + +  + + + +FD+M      V     Y  M+      
Sbjct: 90  SLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMP-----VRDSVTYNVMISSHANH 144

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMS 586
           GL+  A       P + + + W  +LAA    +N  + E         E     +N LMS
Sbjct: 145 GLVSLARHYFDLAPEK-DAVSWNGMLAA--YVRNGRVEEARGLFNSRTEWDVISWNALMS 201

Query: 587 NIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
                  +W  ++  R +   +     PG   V  N +V  + R G
Sbjct: 202 GYV----QWGKMSEARELFDRM-----PGRDVVSWNIMVSGYARRG 238


>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
 gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Cucumis sativus]
          Length = 642

 Score =  344 bits (882), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 196/548 (35%), Positives = 293/548 (53%), Gaps = 44/548 (8%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSEC--GSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           K+I     K  L+    VS  L+   +     SL  AR LF ++ N DV  ++T+IRG  
Sbjct: 22  KQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIRNPDVFMYNTLIRGLS 81

Query: 149 RGGLPEEALEVMREMRFMDIR-PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
               P  AL++  EMR   +  P   +   ++   A+   +  G  +H   V    D  L
Sbjct: 82  DSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQLHCLAVGYGLDSHL 141

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            V   T LI MY++C  L +A+++F+ + + ++V+W  +++   RC  + +  ++F  M 
Sbjct: 142 FVG--TTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGVKDAEQVFRCMP 199

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
             N                      L  W                 N ++  Y K  E++
Sbjct: 200 IRN----------------------LTSW-----------------NIMLAGYTKAGELQ 220

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            AR +F  M  KD + W+ +I  +A     + AF  F  ++   +RPNEV++ G+LS C 
Sbjct: 221 LAREVFMKMPLKDDVSWSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACA 280

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
           +AGA E G+ LH ++EK G    + +  AL+D Y+KCG+++ A  +F   + R    W A
Sbjct: 281 QAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTA 340

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           M+AG  MHG GEEA+  F +ME S +KP+ ITFI +L ACSHAGLV  G S F +MV+  
Sbjct: 341 MIAGMAMHGYGEEAIRLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTY 400

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
           G+ P IEHYGCMVDL GRAG L +A++ +  MP+ PN IVW  LL A  +H N  +    
Sbjct: 401 GIEPVIEHYGCMVDLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQV 460

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHK 627
             Q+ E++P+N G +VL+SNIYAVA +W DVA +RR M   R+KK PG+S +EVN +++ 
Sbjct: 461 KRQLSELDPENSGDHVLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWSMIEVNRIIYS 520

Query: 628 FIRGGMVN 635
           F+ G   N
Sbjct: 521 FVAGEKQN 528



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 179/392 (45%), Gaps = 76/392 (19%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLM 86
           + +I NP +  YN+L+     ++ PS+AL ++  MR+    + D+F+   +LKA A    
Sbjct: 62  FLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRA 121

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE--------------- 131
              G ++H  A+  GLD   +V   LI MY+EC  LV AR +FDE               
Sbjct: 122 LTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAA 181

Query: 132 ----------------MPNRDVVSWSTMIRGYHRGGLPEEALEV---------------- 159
                           MP R++ SW+ M+ GY + G  + A EV                
Sbjct: 182 CFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMI 241

Query: 160 ---------------MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
                           RE+R   +RP+EV++  ++S  A     + G+ +H  V      
Sbjct: 242 VGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFV------ 295

Query: 205 EKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
           EK G    +++  ALID YSKCGNL  A+ +F+ + + S VSWT MI+G        E +
Sbjct: 296 EKSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAI 355

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDM 319
           RLF EM E N+ P  IT +S++  C   G + LG  +    +   G E  +     +VD+
Sbjct: 356 RLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDL 415

Query: 320 YGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
           YG+  +++ A      M  S + ++W  ++ A
Sbjct: 416 YGRAGKLQQAYDFVCQMPISPNDIVWRTLLGA 447



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 5/236 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +++++  +  N   + A   +  +R+ G   +  ++  +L ACAQ      G+ +HGF  
Sbjct: 237 WSTMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVE 296

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G      V+NALI  YS+CG+L  AR +FD M  R  VSW+ MI G    G  EEA+ 
Sbjct: 297 KSGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIR 356

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  EM   +I+P  +  IS++   +    VDLG +  + +V     E + +     ++D+
Sbjct: 357 LFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPV-IEHYGCMVDL 415

Query: 219 YSKCGNLAYAKQLFNRL--NQNSVVSWTVMISGYIRCNEINEGV--RLFAEMIEEN 270
           Y + G L  A     ++  + N +V  T++ +  I  N    G   R  +E+  EN
Sbjct: 416 YGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPEN 471


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  344 bits (882), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 195/561 (34%), Positives = 300/561 (53%), Gaps = 22/561 (3%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           M K G  V +     +L  C +       K +HG  +K G   D +V+ +L+ +Y  CG+
Sbjct: 69  MLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGN 128

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
              AR LFDEMP ++VV+W+ +I GY     P  ALEV  EM  +   PS+  +  M+S 
Sbjct: 129 SQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSA 188

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQ 237
                ++DLGK +H   +      K G A    I  +L  +Y+K GNL    + F R+  
Sbjct: 189 CVASHNIDLGKQVHGYTI------KYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPD 242

Query: 238 NSVVSWTVMISGYIRCNEINE-GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
            +V++WT MIS         E G+ LF +M++  V P+E T+ S++  CG    + LGK 
Sbjct: 243 KNVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQ 302

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA-- 354
           +  +  + G   +L + N+ + +Y +  E   A  LF+ M+   V+ WNA+IS +AQ   
Sbjct: 303 VQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMD 362

Query: 355 ------HCIDKAFE---LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
                 H   + F+   +F  +  S ++P+  T   +LS+C+   ALE G+ +H    K 
Sbjct: 363 SAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKT 422

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
           G   DV++ +ALV+MY KCG +  A + F E   R +  W +M++GY  HG   +A+  F
Sbjct: 423 GFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLF 482

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
            DM  +G KPN ITF+ LL+ACS+AGLV E    FD M +   + P ++HYGCM+D+  R
Sbjct: 483 EDMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVR 542

Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLM 585
            G LD+A+  IK     PN  +W +L+A  + H N  +   AA ++LE++P+     VL+
Sbjct: 543 LGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVLL 602

Query: 586 SNIYAVANRWNDVAGVRRVMK 606
            N+Y    RW DVA VR++ K
Sbjct: 603 LNMYISTGRWRDVARVRKLSK 623



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 234/463 (50%), Gaps = 21/463 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L+T Y  N++P  AL ++  M K G    ++T+  +L AC       LGK++HG+ I
Sbjct: 147 WTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTI 206

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG-YHRGGLPEEAL 157
           K G      + N+L ++Y++ G+L S    F  +P+++V++W+TMI          E  L
Sbjct: 207 KYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELGL 266

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIATALI 216
            +  +M   ++ P+E  + S++SL     D++LGK +   C    C      + +  + +
Sbjct: 267 NLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCAT---NLPVKNSTM 323

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-----------EGVRLFAE 265
            +Y + G    A +LF  +  NSV++W  MISG+ +  +             + +++F +
Sbjct: 324 YLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRD 383

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           ++   + P   T  S++  C  +  L+ G+ +HA  ++ GF   + + +ALV+MY KC  
Sbjct: 384 LVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGC 443

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           I  A   F  M ++ ++ W ++IS Y+Q      A +LF  M ++  +PNE+T V LLS 
Sbjct: 444 IEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSA 503

Query: 386 CTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DIC 443
           C+ AG +E   ++      +  +E  +     ++DM+ + G ++ AY       +  +  
Sbjct: 504 CSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEA 563

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI-TFIGLLN 485
           +W++++AG   HG  E  L F+       +KP  + T++ LLN
Sbjct: 564 IWSSLVAGCRSHGNME--LAFYAADRLLELKPKVVETYVLLLN 604


>gi|302791828|ref|XP_002977680.1| hypothetical protein SELMODRAFT_51483 [Selaginella moellendorffii]
 gi|300154383|gb|EFJ21018.1| hypothetical protein SELMODRAFT_51483 [Selaginella moellendorffii]
          Length = 571

 Score =  344 bits (882), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 194/579 (33%), Positives = 317/579 (54%), Gaps = 15/579 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++T Y K+   S A+  +A M +N    D  T   +L A   +     G+ IH    
Sbjct: 4   WTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGAIQDL---EQGRRIHVRIQ 60

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G D D  V+NAL++MY+ C SL  A  +F+ M +RDVVSW+++I    R G    A+ 
Sbjct: 61  ETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPAAMG 120

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R M+    RP+    I+++ L A   D D G AIH     +    +  V +  A+++M
Sbjct: 121 LFRRMQLQGTRPNR---ITLLELLAWCDDPDEGAAIHERAFAS--GLRSDVPVCNAILNM 175

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+K G    A +LF R+   + VSWT M++  +R    ++ +RLF +M ++ V P  I  
Sbjct: 176 YAKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIAF 235

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA-RTLFDGMK 337
           +++I  C         +W+H  I+R G +   A++NA++  Y +C  ++ A RT  +  +
Sbjct: 236 ITVINACSSAA---TARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFVEIKE 292

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +D + W  +ISA+A+   I +  +LF  M +  VR NEVT++ +++ C  A A++ G+W
Sbjct: 293 RRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGASAIKEGRW 352

Query: 398 LHTYIEKQGLE-VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
           +H  +    LE    ++ TAL+DMY KCG +  A R+F E    D+  W +++A    +G
Sbjct: 353 IHDCVIGYQLERSSSMVATALLDMYGKCGSLEVAARIFGELEQPDVVSWTSIIAATAQNG 412

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV--HGLGLVPKIE 514
            G  A   F  M+  GV+P  +TF+ ++ ACSHAGLV  GK    ++   H  G+   +E
Sbjct: 413 DGSSAARLFCAMQLEGVRPVDVTFVSVVAACSHAGLVDLGKEFVTRLRKDHREGIELTLE 472

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           H GC+VDLL RAG L+EA  +I SMP +P   VW A LA  K +++ S G+ AA QIL +
Sbjct: 473 HCGCIVDLLARAGRLEEAECVIDSMPFKPTPAVWMAFLAGCKAYEDISRGQRAAAQILGL 532

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           + +     + +S+ YA ++R  D   +R +M +  +K+E
Sbjct: 533 DEKTTAAVIALSSTYAASDRRGDGEALRGLMADGCLKEE 571



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 221/453 (48%), Gaps = 25/453 (5%)

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           VV W+ MI GY + G    A++   EM    + P +   I+ V++   + D++ G+ IH 
Sbjct: 1   VVIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDK---ITYVAVLGAIQDLEQGRRIHV 57

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
            +     D  L   +A AL+ MY+ C +LA A ++F  ++   VVSWT +I+   R  + 
Sbjct: 58  RIQETGYDTDL--VVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDF 115

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
              + LF  M  +   P+ IT+L L+  C        G  +H     +G    + + NA+
Sbjct: 116 PAAMGLFRRMQLQGTRPNRITLLELLAWC---DDPDEGAAIHERAFASGLRSDVPVCNAI 172

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           ++MY K     +A  LF+ M  ++ + W A+++A  +A   D A  LF  M+   V P+ 
Sbjct: 173 LNMYAKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDS 232

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           +  + +++ C+ A      +W+H  I + G + D  +  A++  YA+CG +  AYR F E
Sbjct: 233 IAFITVINACSSAA---TARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFVE 289

Query: 437 -AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
               RD   W  M++ +   G  +  +  F +M   GV+ N +T I ++NAC+ A  + E
Sbjct: 290 IKERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGASAIKE 349

Query: 496 GKSVFDKMVHGLGLVPKIEHYGCMV-----DLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           G+ + D ++       ++E    MV     D+ G+ G L+ A  +   +  +P+++ W +
Sbjct: 350 GRWIHDCVIG-----YQLERSSSMVATALLDMYGKCGSLEVAARIFGELE-QPDVVSWTS 403

Query: 551 LLAASKLHKNPSMGE--IAATQILEIEPQNYGY 581
           ++AA+  + + S       A Q+  + P +  +
Sbjct: 404 IIAATAQNGDGSSAARLFCAMQLEGVRPVDVTF 436


>gi|297798862|ref|XP_002867315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313151|gb|EFH43574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 190/555 (34%), Positives = 327/555 (58%), Gaps = 12/555 (2%)

Query: 74  IPTILKACA-QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           +P+++KAC+ Q     LG ++H    K+G D D  VSN+LI MY++     +AR +FDEM
Sbjct: 49  LPSVIKACSFQQEPFLLGAQLHCLCFKSGADRDTVVSNSLISMYAKLSRAYAARKVFDEM 108

Query: 133 PNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV-ADVDLG 191
             RD VS+ +++  Y + GL  EA+++++EM F    P    + S+++L   + +   + 
Sbjct: 109 LQRDTVSYCSIVNCYCQDGLLSEAMKLLKEMYFYGFVPKSELVASLLALCTRMGSSSKVA 168

Query: 192 KAIHACVVRNCKDEKL--GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
           + +HA V+    DE++   V ++TAL+DMY K  + A A  +F+++   + VSWT MISG
Sbjct: 169 RMLHALVL---VDERIQESVLLSTALLDMYLKFDDPAAAFHVFDQMELKNEVSWTAMISG 225

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG-GLQLGKWLHAYILRNGFEF 308
            +       G+  F  M  EN+ P+ +T+LS++  C  +G GL+L K +H +  R+GF  
Sbjct: 226 CVANYNYEVGIDFFRAMQRENLRPNRVTLLSVLPACVELGYGLRLVKEIHGFSFRHGFHS 285

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
              +  A + MY +C  +  +R LF+  K +DV++W+++IS YA+     +A  L   M+
Sbjct: 286 DDRLIAAFMTMYCRCGSVSLSRLLFETSKVRDVVMWSSMISGYAENGDCSEAMNLLSQMR 345

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
                PN VT++ ++S CT + +L++   +H+ I K G    ++L  AL+DMYAKCG + 
Sbjct: 346 KEGSEPNSVTLLAVVSACTHSASLKIASTVHSQILKCGFMSHILLSNALIDMYAKCGSLP 405

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A  +F E   +D+  W++M+  YG+HG G EAL  F  M ++G + +G+ F+ +L+AC+
Sbjct: 406 AAREVFYELNEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKAGHEVDGMAFLAVLSACN 465

Query: 489 HAGLVTEGKSVFDKMVHGLGLVP-KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           HAGLV E +++F +   G   +P  +EHY C ++LLGR G +D+A E+  +MP++P+  +
Sbjct: 466 HAGLVEEAQTIFTQA--GKYHMPVTLEHYSCYINLLGRFGKIDDAFEVTINMPMKPSARI 523

Query: 548 WGALLAASKLHKNPSMG-EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMK 606
           W +LL+A + H    +  +I A ++++ EP N    VL+S I+  +   +    V + M+
Sbjct: 524 WSSLLSACETHGRLDVACKIIANELMKSEPDNPANYVLLSKIHTESGNCDAAEEVWKFMQ 583

Query: 607 EIRVKKEPGFSSVEV 621
             ++ K  GFS +E+
Sbjct: 584 RRQLNKCYGFSKIEL 598



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 79/134 (58%)

Query: 30  TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL 89
           T+ +  +  ++S+++ Y +N   S A+N+ + MRK GSE ++ T+  ++ AC       +
Sbjct: 312 TSKVRDVVMWSSMISGYAENGDCSEAMNLLSQMRKEGSEPNSVTLLAVVSACTHSASLKI 371

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
              +H   +K G      +SNALI MY++CGSL +AR +F E+  +D+VSWS+MI  Y  
Sbjct: 372 ASTVHSQILKCGFMSHILLSNALIDMYAKCGSLPAAREVFYELNEKDLVSWSSMINAYGL 431

Query: 150 GGLPEEALEVMREM 163
            G   EALE+ + M
Sbjct: 432 HGHGSEALEIFKGM 445


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 215/622 (34%), Positives = 318/622 (51%), Gaps = 43/622 (6%)

Query: 38  RYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           R N  +T++++  + + A  ++A M +  +   N  +          L   L + I    
Sbjct: 40  RSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFRAIP--- 96

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
                  D Y  N L+   +   SL  AR LFDEMP RD V+++ MI  +   GL     
Sbjct: 97  -----RPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGL----- 146

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            V     + D+ P + A +S   + A  A V  G+   A  + N + E   V    AL+ 
Sbjct: 147 -VSLARHYFDLAPEKDA-VSWNGMLA--AYVRNGRVEEARGLFNSRTE-WDVISWNALMS 201

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
            Y + G ++ A++LF+R+    VVSW +M+SGY R  ++ E  RLF      +VF +   
Sbjct: 202 GYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF-TWTA 260

Query: 278 ILSLIIECGFV-------------GGLQLGKWLHAYILRNGFEFS-----------LAMA 313
           ++S   + G +               +     + AYI R   + +           +A  
Sbjct: 261 VVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASW 320

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           N ++  Y +   +  A+ +FD M  KD + W A+++AY+Q  C ++  +LFI M      
Sbjct: 321 NTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEW 380

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
            N      +LS C +  ALE G  LH  + + G  V   +  AL+ MY KCG++  A   
Sbjct: 381 VNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNA 440

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F E   RD+  WN M+AGY  HG G+EAL  F  M  +  KP+ IT +G+L ACSH+GLV
Sbjct: 441 FEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSGLV 500

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            +G S F  M H  G+  K EHY CM+DLLGRAG L EAH+++K MP  P+  +WGALL 
Sbjct: 501 EKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLG 560

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           AS++H+NP +G  AA +I E+EP+N G  VL+SNIYA + +W D   +R +M+E  VKK 
Sbjct: 561 ASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKMRVMMEERGVKKV 620

Query: 614 PGFSSVEVNGLVHKFIRGGMVN 635
           PGFS +EV   VH F  G  V+
Sbjct: 621 PGFSWIEVQNKVHTFSAGDCVH 642



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 21/226 (9%)

Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
           LE +VI     +  + + G V  A RLF+    R    +NAM+AGY  +G     L    
Sbjct: 34  LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANG----RLPLAA 89

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRA 526
            + R+  +P+  ++  LL+A + +  + + + +FD+M      V     Y  M+      
Sbjct: 90  SLFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMP-----VRDSVTYNVMISSHANH 144

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMS 586
           GL+  A       P + + + W  +LAA    +N  + E         E     +N LMS
Sbjct: 145 GLVSLARHYFDLAPEK-DAVSWNGMLAA--YVRNGRVEEARGLFNSRTEWDVISWNALMS 201

Query: 587 NIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
                  +W  ++  R +   +     PG   V  N +V  + R G
Sbjct: 202 GYV----QWGKMSEARELFDRM-----PGRDVVSWNIMVSGYARRG 238


>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 692

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 200/614 (32%), Positives = 313/614 (50%), Gaps = 25/614 (4%)

Query: 26  KFSYTNIINP-LTRYNSLVTSYIKNNKP--SSALNIYAFMRKNGSEVDNFTIPTILKACA 82
           K  + +I N  +  +N L+  Y +      S  + ++  MR   +  +  T   +  A +
Sbjct: 65  KLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAAS 124

Query: 83  QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
               T  G + H  AIK     D +V ++LI MY + G ++ AR +FD +P R+ VSW+T
Sbjct: 125 SSPETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWAT 184

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           +I GY    +  EA E+   MR  +    +    S++S       V  GK IH   ++N 
Sbjct: 185 IISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKN- 243

Query: 203 KDEKLGVA-IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVR 261
               L +A +  AL+ MY KCG L  A + F        ++W+ MI+GY +  + +E + 
Sbjct: 244 --GLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALN 301

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           LF  M      PSE T + +I  C  +G L+ GK +H Y L+ G+E  +        +  
Sbjct: 302 LFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKA 361

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           KC  +  AR  FD +K  D+++W +                    M++ ++ P+E+TM  
Sbjct: 362 KCGSLVDARKGFDYLKEPDIVLWTSC------------------RMQMERIMPHELTMAS 403

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           +L  C+   ALE GK +H    K G  ++V + +AL  MYAKCG +     +F     RD
Sbjct: 404 VLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRD 463

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           I  WNAM++G   +G G +AL  F ++     KP+ +TF+ +L+ACSH GLV  GK  F 
Sbjct: 464 IMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFR 523

Query: 502 KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
            M+   G++P++EHY CMVD+L RAG L E  E I+S  +   M +W  LL A + ++N 
Sbjct: 524 MMLDEFGIIPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNY 583

Query: 562 SMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
            +G  A  +++E+  Q     +L+S+IY    R +DV  VRR+MK   V KEPG S +E+
Sbjct: 584 ELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIEL 643

Query: 622 NGLVHKFIRGGMVN 635
              VH F+ G  ++
Sbjct: 644 KSQVHVFVVGDQIH 657



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 244/501 (48%), Gaps = 30/501 (5%)

Query: 56  LNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQM 115
           +N+Y    ++ S VD      +L  C +      GK IH   ++ G     Y++N+L+ +
Sbjct: 1   MNLYLLPPQHRSFVD------LLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNL 54

Query: 116 YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA--LEVMREMRFMDIRPSEV 173
           Y++CGS+V A+ +F+ + N+DVVSW+ +I GY + G    +  +E+ + MR  +  P+  
Sbjct: 55  YAKCGSIVKAKLVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGH 114

Query: 174 AMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFN 233
               + +  +   +   G   HA  ++        V + ++LI+MY K G +  A+++F+
Sbjct: 115 TFSGVFTAASSSPETFGGLQAHALAIKT--SNFYDVFVGSSLINMYCKIGCMLDARKVFD 172

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL 293
            + + + VSW  +ISGY       E   LF  M  E     +    S++        +  
Sbjct: 173 TIPERNTVSWATIISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHY 232

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           GK +H   L+NG     ++ NALV MYGKC  +  A   F+    KD + W+A+I+ YAQ
Sbjct: 233 GKQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQ 292

Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
           A    +A  LF +M ++  +P+E T VG+++ C++ GALE GK +H Y  K G E  +  
Sbjct: 293 AGDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYF 352

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
           +     + AKCG +  A + F      DI +W +                  + MER  +
Sbjct: 353 RKGFDYLKAKCGSLVDARKGFDYLKEPDIVLWTSCR----------------MQMER--I 394

Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
            P+ +T   +L ACS    + +GK +  + +   G   ++     +  +  + G L++ +
Sbjct: 395 MPHELTMASVLRACSSLAALEQGKQIHAQTIK-YGFSLEVPIGSALSTMYAKCGSLEDGN 453

Query: 534 EMIKSMPLRPNMIVWGALLAA 554
            + + MP R +++ W A+++ 
Sbjct: 454 LVFRRMPSR-DIMTWNAMISG 473


>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 201/644 (31%), Positives = 348/644 (54%), Gaps = 20/644 (3%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPL---------TRYNSLVTSYIKNNKPS 53
           + N  LN+  T       + T + F+  +++  +           +N++++ Y+K  +  
Sbjct: 141 VYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLI 200

Query: 54  SALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD--GDAYVSNA 111
            A  ++  M + G      +   +  A  ++        ++G  +K G D   D +V ++
Sbjct: 201 EAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSS 260

Query: 112 LIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE-MRFMDIRP 170
            I MY+E G +  AR +FD    R+   W+TMI GY +   P EA+++  + M       
Sbjct: 261 AIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXL 320

Query: 171 SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQ 230
            +V  +S ++  + +  +DLG+ +HA ++++     L V I  A+I MYS+CG++  + +
Sbjct: 321 DDVTFLSALTAISQLQWLDLGRQLHAYILKS--STILQVVILNAIIVMYSRCGSIGTSFK 378

Query: 231 LFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGG 290
           +F+ + +  VV+W  M+S +++    +EG+ L  EM ++      +T+ +L+     +  
Sbjct: 379 VFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRS 438

Query: 291 LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD--GMKSKDVMIWNAVI 348
            ++GK  HAY++R+G +F   M   L+DMY K   I +A+ LF+      +D   WNA+I
Sbjct: 439 QEIGKQAHAYLIRHGIQFE-GMDGYLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMI 497

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
           + Y Q    ++ F +F  M    VRPN VT+  +L  C   G + +GK +H +  +  L 
Sbjct: 498 AGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLN 557

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            +V + TAL+DMY+K G +  A  +F+E + ++   +  M+  YG HG GE AL  F  M
Sbjct: 558 QNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAM 617

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
             SG+KP+ +TF+ +L+ACS+AGLV EG  +F  M     + P  EHY C+ D+LGR G 
Sbjct: 618 LGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSSEHYCCVADMLGRVGR 677

Query: 529 LDEAHEMIKSMPLRPNMI-VWGALLAASKLHKNPSMGEIAATQILEIEPQNY--GYNVLM 585
           + EA+E +K +    N   +WG+LL A ++H    +G++ A ++LE+E  +   GY+VL+
Sbjct: 678 VXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFELGKVVANKLLEMEKGSXLTGYHVLL 737

Query: 586 SNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           SNIYA    W++V  VR+ M++  + KE G S VEV G V+ F+
Sbjct: 738 SNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFM 781



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 173/576 (30%), Positives = 287/576 (49%), Gaps = 36/576 (6%)

Query: 14  RQCHAHIIKTHFKFSYTNIINPLT-RYNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDN 71
           RQ H H     F     +I  P T  +N+++  +I NN P  AL  YA MR + S + D+
Sbjct: 49  RQGHPHQALHLFD----SIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDS 104

Query: 72  FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVS------- 124
           +T  + LKACAQ     LGK +H   +++       V N+L+ MYS C + V        
Sbjct: 105 YTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYD 164

Query: 125 ------ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISM 178
                  R +FD M  R+VV+W+TMI  Y +     EA ++ R M  M IRP+ V+ +++
Sbjct: 165 FNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNV 224

Query: 179 VSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
                 + D D    ++  VV+   D      + ++ I MY++ G + +A+++F+   + 
Sbjct: 225 FPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLER 284

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP-SEITILSLIIECGFVGGLQLGKWL 297
           +   W  MI GY++ N   E + LF +++E   F   ++T LS +     +  L LG+ L
Sbjct: 285 NTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQL 344

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           HAYIL++     + + NA++ MY +C  I ++  +F  M  +DV+ WN ++SA+ Q    
Sbjct: 345 HAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLD 404

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
           D+   L   M+      + VT+  LLSL +   + E+GK  H Y+ + G++ +  +   L
Sbjct: 405 DEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEG-MDGYL 463

Query: 418 VDMYAKCGDVNGAYRLFSE-AIY-RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           +DMYAK G +  A +LF + + Y RD   WNAM+AGY  +G  EE    F  M    V+P
Sbjct: 464 IDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRP 523

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDE 531
           N +T   +L AC+  G +  GK      +HG  +   +         ++D+  ++G +  
Sbjct: 524 NAVTLASILPACNPMGTIGLGKQ-----IHGFAIRCFLNQNVFVGTALLDMYSKSGAITY 578

Query: 532 AHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
           A E + +  L  N + +  ++ +   H    MGE A
Sbjct: 579 A-ENVFAETLEKNSVTYTTMILSYGQH---GMGERA 610


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 205/597 (34%), Positives = 324/597 (54%), Gaps = 59/597 (9%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +NS+V  Y +NN+P  A  ++  M +  +   N  I                     
Sbjct: 47  IVSWNSMVAGYFQNNRPREARYLFDKMPERNTVSWNGLI--------------------- 85

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
                      YV N   +M SE      AR  FD MP R+VVSW+ M+RGY + GL  E
Sbjct: 86  ---------SGYVKN---RMVSE------ARKAFDTMPERNVVSWTAMVRGYVQEGLVSE 127

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A  +  +M   ++    V+   M+     V  +D  + +    +   KD    V   T +
Sbjct: 128 AETLFWQMPEKNV----VSWTVMLGGLIQVRRIDEARGLFD--IMPVKD----VVARTNM 177

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           I  Y + G LA A++LF+ + + +V+SWT MISGY++  +++   +LF  M E+N    E
Sbjct: 178 ISGYCQEGRLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLFEVMPEKN----E 233

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA-NALVDMYGKCREIRSARTLFD 334
           ++  ++++     G  Q G+   A  L +       +A NA++  +G+  E+  AR +FD
Sbjct: 234 VSWTAMLM-----GYTQGGRIEEASELFDAMPVKAVVACNAMILGFGQNGEVAKARQVFD 288

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            ++ KD   W+A+I  Y +     +A  LF  M+   V+ N  +++ +LS+C    +L+ 
Sbjct: 289 QIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASLASLDH 348

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G+ +H  + K   + DV + + L+ MY KCGD+  A ++F     +DI MWN+++ GY  
Sbjct: 349 GRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQ 408

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           HG  EEAL  F +M  SG+  +G+TF+G+L+ACS+ G V EG  +F+ M     + PK E
Sbjct: 409 HGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTE 468

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HY CMVDLLGRAGL+++A ++I+ MP+  + I+WGALL A + H N ++ E+AA ++L++
Sbjct: 469 HYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQL 528

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           EP+N G  +L+SNIYA   RW DVA +RR M+  +V K PG S +EV   VH F  G
Sbjct: 529 EPKNAGPYILLSNIYASKGRWGDVAELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGG 585



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 10/132 (7%)

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           YA+ G +  A R+F E   + I  WN+M+AGY  +    EA   F  M       N +++
Sbjct: 26  YARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPER----NTVSW 81

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
            GL++      +V+E +  FD M         +  +  MV    + GL+ EA  +   MP
Sbjct: 82  NGLISGYVKNRMVSEARKAFDTMPE-----RNVVSWTAMVRGYVQEGLVSEAETLFWQMP 136

Query: 541 LRPNMIVWGALL 552
            + N++ W  +L
Sbjct: 137 EK-NVVSWTVML 147


>gi|357114751|ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 695

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 191/599 (31%), Positives = 325/599 (54%), Gaps = 14/599 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + S V+   +N +P +A+  +A M  +G   ++F     L ACA       G+++H  A+
Sbjct: 61  WTSAVSGLTRNGRPEAAMAAFADMVASGVAPNDFAFNAALAACADASALRAGEQVHSLAV 120

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G  GD++V ++L+++YS CG L +A+ +FD M + DVV +++++  + R G  E A++
Sbjct: 121 RAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDRMESPDVVGYTSLVSAFCRSGEFELAVD 180

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
            + +M    + P+E    +M S+        LG+ +HA +++        +  ++ALID 
Sbjct: 181 TLHQMLRQGVEPNE---HTMASILGSCCPFVLGEQVHAYMIKAMGLHSQSMYASSALIDF 237

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF-PSEIT 277
           YS+      AK +FN L+  +VV+W  M+  +IR     + +++F +MI E V  P+E  
Sbjct: 238 YSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHIRDGRPEDALQVFDDMISEGVVEPNE-- 295

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
             +  I  G  G + LG+ LH+  ++      L ++NAL+ MYG+   ++    +   ++
Sbjct: 296 -FAFSIALGACGSIALGRQLHSSAIKRNLTSDLRVSNALLSMYGRICHVQELEAVLKDIE 354

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           + D++ W   ISA  Q    +KA  L   +    + PN+      LS C +   L+ G+ 
Sbjct: 355 NPDIVSWTTAISANFQNGFSEKAIALLSMLHSRGLMPNDYAFSSALSSCADLALLDQGRQ 414

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
            H    K G ++ +    AL+++Y+KCG +  A   F    +RD+  WN+++ GY  HG 
Sbjct: 415 FHCLALKLGCDLKICTGNALINLYSKCGQIAPAKLAFDVMDHRDVTSWNSLIHGYAQHGD 474

Query: 458 GEEALIFFVDMER-SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HGL-GLVPKIE 514
              AL  F +M    G +P+  +F+G+L AC+HAG+V EG ++F  +  H   G  P   
Sbjct: 475 ASMALQVFGEMRSIRGTEPDESSFLGVLAACNHAGMVNEGVALFRAIASHSQHGATPSPS 534

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HY C+VD++GR+G  D+A  +++ MP RP  ++W  LLA+ +LH N   GE+AA +++E+
Sbjct: 535 HYACVVDMMGRSGRFDDALRLVEEMPFRPGALIWKTLLASCRLHGNLETGELAAERLMEL 594

Query: 575 ----EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
               E ++    VLMS I+A+   W D   VRR M E  V+KE G S VEV+  VH F+
Sbjct: 595 SEGGEDRDSASYVLMSGIHAMRGEWRDAYRVRRRMDEAGVRKEAGCSWVEVHNEVHTFV 653



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 223/453 (49%), Gaps = 23/453 (5%)

Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV 179
           GSL  A  LFD MP +++V+W++ + G  R G PE A+    +M    + P++ A  + +
Sbjct: 41  GSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADMVASGVAPNDFAFNAAL 100

Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRL 235
           +  AD + +  G+ +H+  VR       G A    + ++L+++YS+CG+L  AK +F+R+
Sbjct: 101 AACADASALRAGEQVHSLAVR------AGFAGDSWVGSSLVELYSRCGDLGAAKGVFDRM 154

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE-CGFVGGLQLG 294
               VV +T ++S + R  E    V    +M+ + V P+E T+ S++   C FV    LG
Sbjct: 155 ESPDVVGYTSLVSAFCRSGEFELAVDTLHQMLRQGVEPNEHTMASILGSCCPFV----LG 210

Query: 295 KWLHAYILRNGFEFSLAM--ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
           + +HAY+++     S +M  ++AL+D Y +  E   A+ +F+ +  K+V+ W +++  + 
Sbjct: 211 EQVHAYMIKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHI 270

Query: 353 QAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
           +    + A ++F  M     V PNE      L  C   G++ +G+ LH+   K+ L  D+
Sbjct: 271 RDGRPEDALQVFDDMISEGVVEPNEFAFSIALGAC---GSIALGRQLHSSAIKRNLTSDL 327

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
            +  AL+ MY +   V     +  +    DI  W   ++    +G  E+A+     +   
Sbjct: 328 RVSNALLSMYGRICHVQELEAVLKDIENPDIVSWTTAISANFQNGFSEKAIALLSMLHSR 387

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
           G+ PN   F   L++C+   L+ +G+  F  +   LG   KI     +++L  + G +  
Sbjct: 388 GLMPNDYAFSSALSSCADLALLDQGRQ-FHCLALKLGCDLKICTGNALINLYSKCGQIAP 446

Query: 532 AHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
           A      M  R ++  W +L+     H + SM 
Sbjct: 447 AKLAFDVMDHR-DVTSWNSLIHGYAQHGDASMA 478



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 187/383 (48%), Gaps = 15/383 (3%)

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +D   K G+L  A  LF+R+ + ++V+WT  +SG  R       +  FA+M+   V P++
Sbjct: 34  LDRLMKSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADMVASGVAPND 93

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
               + +  C     L+ G+ +H+  +R GF     + ++LV++Y +C ++ +A+ +FD 
Sbjct: 94  FAFNAALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLGAAKGVFDR 153

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           M+S DV+ + +++SA+ ++   + A +    M    V PNE TM  +L  C       +G
Sbjct: 154 MESPDVVGYTSLVSAFCRSGEFELAVDTLHQMLRQGVEPNEHTMASILGSCC---PFVLG 210

Query: 396 KWLHTY-IEKQGLEVDVIL-KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
           + +H Y I+  GL    +   +AL+D Y++  + + A  +F+    +++  W +MM  + 
Sbjct: 211 EQVHAYMIKAMGLHSQSMYASSALIDFYSRNSEFDMAKAVFNNLHCKNVVTWCSMMQLHI 270

Query: 454 MHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             G  E+AL  F DM   G V+PN   F   L AC   G +  G+ +    +    L   
Sbjct: 271 RDGRPEDALQVFDDMISEGVVEPNEFAFSIALGAC---GSIALGRQLHSSAIK-RNLTSD 326

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
           +     ++ + GR   + E   ++K +   P+++ W   ++A+      S   IA   +L
Sbjct: 327 LRVSNALLSMYGRICHVQELEAVLKDIE-NPDIVSWTTAISAN-FQNGFSEKAIALLSML 384

Query: 573 E---IEPQNYGYNVLMSNIYAVA 592
               + P +Y ++  +S+   +A
Sbjct: 385 HSRGLMPNDYAFSSALSSCADLA 407



 Score = 41.2 bits (95), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 70/184 (38%), Gaps = 45/184 (24%)

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           +V+     +D   K G +  A  LF     ++I  W + ++G   +G  E A+  F DM 
Sbjct: 26  EVVHDCKRLDRLMKSGSLGDALDLFDRMPRKNIVAWTSAVSGLTRNGRPEAAMAAFADMV 85

Query: 470 RSGVKPN---------------------------------GITFIG--LLNACSHAGLVT 494
            SGV PN                                 G +++G  L+   S  G + 
Sbjct: 86  ASGVAPNDFAFNAALAACADASALRAGEQVHSLAVRAGFAGDSWVGSSLVELYSRCGDLG 145

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG----LLDEAHEMIKSMPLRPNMIVWGA 550
             K VFD+M       P +  Y  +V    R+G     +D  H+M++   + PN     +
Sbjct: 146 AAKGVFDRMES-----PDVVGYTSLVSAFCRSGEFELAVDTLHQMLRQ-GVEPNEHTMAS 199

Query: 551 LLAA 554
           +L +
Sbjct: 200 ILGS 203


>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
          Length = 606

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 175/438 (39%), Positives = 257/438 (58%), Gaps = 33/438 (7%)

Query: 227 YAKQLFNRLNQNSVVS--WTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           YA+Q+F  + +    +  W   +      +   + + LF  + + +V P   T  S++  
Sbjct: 78  YAQQIFECVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRA 137

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
           C  +  L  G+ LH  + + GF  +L + N +V +Y  C E+  AR LF+ M  +DV+ W
Sbjct: 138 CLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTW 197

Query: 345 N-------------------------------AVISAYAQAHCIDKAFELFIHMKVSKVR 373
           N                               ++I+ Y Q     +A  LF  M+ + V+
Sbjct: 198 NIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVK 257

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
            NEVT+V +L+ C + GAL++G  +H Y  + G + +V +   L+DMY KCG +  A ++
Sbjct: 258 CNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKV 317

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F E   R +  W+AM+ G  MHG  EEAL  F DM + G++PNG+TFIGLL+ACSH GL+
Sbjct: 318 FEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLI 377

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           +EG+  F  M    G++P+IEHYGCMVDLL RAGLL EAHE I +MP++PN +VWGALL 
Sbjct: 378 SEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLG 437

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           A ++HKN  M E A   +LE++P N GY V++SNIYA A RW D A VR+ MK+ +VKK 
Sbjct: 438 ACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKT 497

Query: 614 PGFSSVEVNGLVHKFIRG 631
           PG+SS+ V+G+VH+F+ G
Sbjct: 498 PGWSSITVDGVVHEFVAG 515



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 204/446 (45%), Gaps = 72/446 (16%)

Query: 12  QTRQCHAHIIKTHFKFSYTNIINPLTR------------------------------YNS 41
           + RQ HA IIKT+   S    I PLTR                              +NS
Sbjct: 43  ELRQVHAQIIKTNAPLS----ILPLTRVGLVCAFTPSFHYAQQIFECVEKQKPETFVWNS 98

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
            + +  + + P  A+ ++  +R+     D FT  ++L+AC  +L    G+ +HG   K G
Sbjct: 99  CLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVG 158

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVV----------------------- 138
              + Y+ N ++ +Y+ CG +  AR LF++MP RDVV                       
Sbjct: 159 FRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFS 218

Query: 139 --------SWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
                   SW++MI GY + G  +EA+ +  +M    ++ +EV ++++++  AD+  +DL
Sbjct: 219 RMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDL 278

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           G  IH     N    K  V I+  LIDMY KCG L  A ++F  + + +VVSW+ MI G 
Sbjct: 279 GMRIHE--YSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGL 336

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFS 309
                  E +RLF++M +  + P+ +T + L+  C  +G +  G+   A + R+ G    
Sbjct: 337 AMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQ 396

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMK 368
           +     +VD+  +   +  A      M  K + ++W A++ A      ++ A E   H+ 
Sbjct: 397 IEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLL 456

Query: 369 VSKVRP-NEVTMVGLLSLCTEAGALE 393
             ++ P N+   V L ++  EAG  E
Sbjct: 457 --ELDPLNDGYYVVLSNIYAEAGRWE 480



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 186/387 (48%), Gaps = 48/387 (12%)

Query: 125 ARYLFD--EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLF 182
           A+ +F+  E    +   W++ ++    G  P +A+ +   +R  D+ P      S++   
Sbjct: 79  AQQIFECVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 138

Query: 183 ADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
            ++ D+  G+ +H  V      EK+G    + +   ++ +Y+ CG +  A+ LF ++ Q 
Sbjct: 139 LNLLDLSNGRILHGVV------EKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQR 192

Query: 239 SVV-------------------------------SWTVMISGYIRCNEINEGVRLFAEMI 267
            VV                               SWT MI+GY++C +  E + LFA+M 
Sbjct: 193 DVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKME 252

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
           E  V  +E+T+++++  C  +G L LG  +H Y  R+GF+ ++ ++N L+DMY KC  + 
Sbjct: 253 EAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLE 312

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            A  +F+ M+ + V+ W+A+I   A     ++A  LF  M    + PN VT +GLL  C+
Sbjct: 313 EACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACS 372

Query: 388 EAGALEMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYR-LFSEAIYRDICMW 445
             G +  G+     + +  G+   +     +VD+ ++ G ++ A+  + +  +  +  +W
Sbjct: 373 HMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVW 432

Query: 446 NAMMAGYGMHG---CGEEALIFFVDME 469
            A++    +H      EEA+   ++++
Sbjct: 433 GALLGACRVHKNVEMAEEAIKHLLELD 459



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 131/298 (43%), Gaps = 37/298 (12%)

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK--DVMIWNAVISAYA 352
           + +HA I++     S+     +  +         A+ +F+ ++ +  +  +WN+ + A A
Sbjct: 45  RQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYAQQIFECVEKQKPETFVWNSCLKALA 104

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI 412
           +      A  LF  ++   V P+  T   +L  C     L  G+ LH  +EK G   ++ 
Sbjct: 105 EGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLY 164

Query: 413 LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN-------------------------- 446
           L+  +V +YA CG++  A  LF +   RD+  WN                          
Sbjct: 165 LQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERN 224

Query: 447 -----AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
                +M+AGY   G  +EA+  F  ME +GVK N +T + +L AC+  G +  G  + +
Sbjct: 225 VRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHE 284

Query: 502 -KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
               HG     +I +   ++D+  + G L+EA ++ + M  R  ++ W A++    +H
Sbjct: 285 YSNRHGFKRNVRISN--TLIDMYVKCGCLEEACKVFEEMEER-TVVSWSAMIGGLAMH 339


>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 175/438 (39%), Positives = 256/438 (58%), Gaps = 33/438 (7%)

Query: 227 YAKQLFNRLNQN--SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           YA+Q+F  + +       W   +      +   + + LF  + + +V P   T  S++  
Sbjct: 78  YAQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRA 137

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
           C  +  L  G+ LH  + + GF  +L + N +V +Y  C E+  AR LF+ M  +DV+ W
Sbjct: 138 CLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTW 197

Query: 345 N-------------------------------AVISAYAQAHCIDKAFELFIHMKVSKVR 373
           N                               ++I+ Y Q     +A  LF  M+ + V+
Sbjct: 198 NIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVK 257

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
            NEVT+V +L+ C + GAL++G  +H Y  + G + +V +   L+DMY KCG +  A ++
Sbjct: 258 CNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKV 317

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F E   R +  W+AM+ G  MHG  EEAL  F DM + G++PNG+TFIGLL+ACSH GL+
Sbjct: 318 FEEMEERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLI 377

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           +EG+  F  M    G++P+IEHYGCMVDLL RAGLL EAHE I +MP++PN +VWGALL 
Sbjct: 378 SEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLG 437

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           A ++HKN  M E A   +LE++P N GY V++SNIYA A RW D A VR+ MK+ +VKK 
Sbjct: 438 ACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKT 497

Query: 614 PGFSSVEVNGLVHKFIRG 631
           PG+SS+ V+G+VH+F+ G
Sbjct: 498 PGWSSITVDGVVHEFVAG 515



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 204/446 (45%), Gaps = 72/446 (16%)

Query: 12  QTRQCHAHIIKTHFKFSYTNIINPLTR------------------------------YNS 41
           + RQ HA IIKT+   S    I PLTR                              +NS
Sbjct: 43  ELRQVHAQIIKTNAPLS----ILPLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNS 98

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
            + +  + + P  A+ ++  +R+     D FT  ++L+AC  +L    G+ +HG   K G
Sbjct: 99  CLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVG 158

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVV----------------------- 138
              + Y+ N ++ +Y+ CG +  AR LF++MP RDVV                       
Sbjct: 159 FRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFS 218

Query: 139 --------SWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
                   SW++MI GY + G  +EA+ +  +M    ++ +EV ++++++  AD+  +DL
Sbjct: 219 RMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDL 278

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           G  IH     N    K  V I+  LIDMY KCG L  A ++F  + + +VVSW+ MI G 
Sbjct: 279 GMRIHE--YSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGL 336

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFS 309
                  E +RLF++M +  + P+ +T + L+  C  +G +  G+   A + R+ G    
Sbjct: 337 AMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQ 396

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMK 368
           +     +VD+  +   +  A      M  K + ++W A++ A      ++ A E   H+ 
Sbjct: 397 IEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHL- 455

Query: 369 VSKVRP-NEVTMVGLLSLCTEAGALE 393
             ++ P N+   V L ++  EAG  E
Sbjct: 456 -LELDPLNDGYYVVLSNIYAEAGRWE 480



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 179/370 (48%), Gaps = 46/370 (12%)

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           W++ ++    G  P +A+ +   +R  D+ P      S++    ++ D+  G+ +H  V 
Sbjct: 96  WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVV- 154

Query: 200 RNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV-------------- 241
                EK+G    + +   ++ +Y+ CG +  A+ LF ++ Q  VV              
Sbjct: 155 -----EKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGD 209

Query: 242 -----------------SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
                            SWT MI+GY++C +  E + LFA+M E  V  +E+T+++++  
Sbjct: 210 HEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAA 269

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
           C  +G L LG  +H Y  R+GF+ ++ ++N L+DMY KC  +  A  +F+ M+ + V+ W
Sbjct: 270 CADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSW 329

Query: 345 NAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIE 403
           +A+I   A     ++A  LF  M    + PN VT +GLL  C+  G +  G ++  +   
Sbjct: 330 SAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTR 389

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYR-LFSEAIYRDICMWNAMMAGYGMHG---CGE 459
             G+   +     +VD+ ++ G ++ A+  + +  +  +  +W A++    +H      E
Sbjct: 390 DYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAE 449

Query: 460 EALIFFVDME 469
           EA+   ++++
Sbjct: 450 EAIKHLLELD 459



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 139/323 (43%), Gaps = 38/323 (11%)

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
           NV P     L + +   F    +L + +HA I++     S+     +  +         A
Sbjct: 21  NVKPQSSETLKIDLLRNFNSPFEL-RQVHAQIIKTNAPLSILPLTRVGLVCAFTPSFHYA 79

Query: 330 RTLFDGMKSK--DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           + +F  ++ +  +  +WN+ + A A+      A  LF  ++   V P+  T   +L  C 
Sbjct: 80  QQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACL 139

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN- 446
               L  G+ LH  +EK G   ++ L+  +V +YA CG++  A  LF +   RD+  WN 
Sbjct: 140 NLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNI 199

Query: 447 ------------------------------AMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
                                         +M+AGY   G  +EA+  F  ME +GVK N
Sbjct: 200 MIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCN 259

Query: 477 GITFIGLLNACSHAGLVTEGKSVFD-KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEM 535
            +T + +L AC+  G +  G  + +    HG     +I +   ++D+  + G L+EA ++
Sbjct: 260 EVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISN--TLIDMYVKCGCLEEACKV 317

Query: 536 IKSMPLRPNMIVWGALLAASKLH 558
            + M  R  ++ W A++    +H
Sbjct: 318 FEEMEER-TVVSWSAMIGGLAMH 339


>gi|296088310|emb|CBI36755.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 199/567 (35%), Positives = 316/567 (55%), Gaps = 44/567 (7%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFD 130
           +I ++L+ C    M  L K +HG  I   +  D    + L+    YS+ G+L  A+ +F+
Sbjct: 7   SILSLLEKCK--TMAEL-KRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFN 63

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
           ++    +  W++MI+GY     P+EAL + REMR     P       ++   + V   +L
Sbjct: 64  QIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNL 123

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           G+ +H C+V+     ++ V  ATAL+ MY+ CG++  A ++F+ + + +VV+WT +I+G 
Sbjct: 124 GQCVHNCIVKT--GFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGC 181

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE--- 307
           I  +  +E VR++ +M   +V P+EIT++++++ C     L  G+W+H    + G +   
Sbjct: 182 ISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQ 241

Query: 308 ----FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
               F++ +A A+VDMY KC                          AY Q    ++A +L
Sbjct: 242 SNSNFNVILATAIVDMYAKC--------------------------AYNQYGQANEALDL 275

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F  M+++   P++ T + ++  C   GAL  G+ LH Y+ K  L  D  + TALVDMYAK
Sbjct: 276 FSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAK 335

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM-ERSGVKPNGITFIG 482
            GD   A ++FSE   +D+  W +++ G  MHG GEEAL FF  M E + + P+ IT+IG
Sbjct: 336 SGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIG 395

Query: 483 LLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
           +L+ACSH G V +GK+ F  M +  G+ P  +HYGCMVDLL RAG L EA  +++ MP+ 
Sbjct: 396 VLSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVE 455

Query: 543 PNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVR 602
           PN  +W ALL   K+++N  + +    ++ E+E    G  VL+SNIYA A RW +V   R
Sbjct: 456 PNTAIWSALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKMAR 515

Query: 603 RVMKEIRVKKEPGFSSVE---VNGLVH 626
            +MKE +++K  G SSVE   V G +H
Sbjct: 516 ELMKERKIQKSLGHSSVEMKMVGGALH 542



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 220/435 (50%), Gaps = 35/435 (8%)

Query: 26  KFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV 84
           K  +  I  P L  +NS++  Y  +  P  AL +Y  MR+ G   D+FT P +LKAC+ V
Sbjct: 59  KSVFNQIDRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLV 118

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
              +LG+ +H   +K G + D Y + AL+QMY+ CG + +A  +FD++P  +VV+W+++I
Sbjct: 119 NGYNLGQCVHNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLI 178

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
            G      P EA+ V ++M    + P+E+ M++++   A   D++ G+ +H    +   D
Sbjct: 179 AGCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLD 238

Query: 205 -----EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
                    V +ATA++DMY+KC         +N+  Q                   NE 
Sbjct: 239 PFQSNSNFNVILATAIVDMYAKCA--------YNQYGQ------------------ANEA 272

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
           + LF++M      P + T L +I  C  +G L  G+ LHAY+ +       A+  ALVDM
Sbjct: 273 LDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDM 332

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV-SKVRPNEVT 378
           Y K  +   A+ +F  ++ KDV  W ++I   A     ++A   F  M+  + + P+E+T
Sbjct: 333 YAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEIT 392

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEK-QGLEVDVILKTALVDMYAKCGDVNGAYRLFSE- 436
            +G+LS C+  G +E GK     ++   G+E        +VD+ ++ G +  A RL  + 
Sbjct: 393 YIGVLSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKM 452

Query: 437 AIYRDICMWNAMMAG 451
            +  +  +W+A++ G
Sbjct: 453 PVEPNTAIWSALLNG 467


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 174/446 (39%), Positives = 267/446 (59%), Gaps = 12/446 (2%)

Query: 192 KAIHACVVRNCKDEKLGVAIATA------LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           + IHA  +R+      GV +         +  + S C  ++YA Q+F+++   ++ +W  
Sbjct: 57  RQIHAFSIRH------GVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNT 110

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
           MI GY         + L+ +M    + P   T   L+     +  ++ G+ +H+  +RNG
Sbjct: 111 MIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNG 170

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
           FE  + + N LV MY  C    SA  LF+ M  ++++ WN+VI+ YA     ++A  LF 
Sbjct: 171 FESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFR 230

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            M +  V P+  TMV LLS C E GAL +G+  H Y+ K GL+ ++    AL+D+YAKCG
Sbjct: 231 EMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCG 290

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
            +  A+++F E   + +  W +++ G  ++G G+EAL  F ++ER G+ P+ ITF+G+L 
Sbjct: 291 SIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLY 350

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
           ACSH G+V EG   F +M    G+VPKIEHYGCMVDLLGRAGL+ +AHE I++MP++PN 
Sbjct: 351 ACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNA 410

Query: 546 IVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVM 605
           +VW  LL A  +H + ++GE+A  Q+L++EP++ G  VL+SN+YA   RW+DV  VRR M
Sbjct: 411 VVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTM 470

Query: 606 KEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VKK PG S VE+   +H+F+ G
Sbjct: 471 LREGVKKTPGHSLVELRNRLHEFVMG 496



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 198/392 (50%), Gaps = 17/392 (4%)

Query: 77  ILKACAQVLMTHLG-----KEIHGFAIKNGL-----DGDAYVSNALIQMYSECGSLVSAR 126
           ILK C  +L++        ++IH F+I++G+     D   Y+   +  + S C  +  A 
Sbjct: 38  ILKKCIALLLSCASSKFKFRQIHAFSIRHGVPLTNPDMGKYL---IFTLLSFCSPMSYAH 94

Query: 127 YLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            +F ++ N ++ +W+TMIRGY     P  ALE+ R+M    I P       ++   A + 
Sbjct: 95  QIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLM 154

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
           DV  G+ +H+  +RN  +    V +   L+ MY+ CG+   A +LF  + + ++V+W  +
Sbjct: 155 DVREGEKVHSIAIRNGFESL--VFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSV 212

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           I+GY      NE + LF EM    V P   T++SL+  C  +G L LG+  H Y+++ G 
Sbjct: 213 INGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGL 272

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
           + +L   NAL+D+Y KC  IR A  +FD M+ K V+ W ++I   A      +A ELF  
Sbjct: 273 DGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKE 332

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
           ++   + P+E+T VG+L  C+  G ++ G  +     E+ G+   +     +VD+  + G
Sbjct: 333 LERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAG 392

Query: 426 DVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
            V  A+       +  +  +W  ++    +HG
Sbjct: 393 LVKQAHEFIQNMPMQPNAVVWRTLLGACTIHG 424



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 172/328 (52%), Gaps = 11/328 (3%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           ++ I NP +  +N+++  Y ++  P  AL +Y  M  +  E D  T P +LKA A+++  
Sbjct: 97  FSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDV 156

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
             G+++H  AI+NG +   +V N L+ MY+ CG   SA  LF+ M  R++V+W+++I GY
Sbjct: 157 REGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGY 216

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
              G P EAL + REM    + P    M+S++S  A++  + LG+  H  +V+   D  L
Sbjct: 217 ALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNL 276

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
                 AL+D+Y+KCG++  A ++F+ + + SVVSWT +I G        E + LF E+ 
Sbjct: 277 HA--GNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELE 334

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA----NALVDMYGKC 323
            + + PSEIT + ++  C   G +  G     Y  R   E+ +         +VD+ G+ 
Sbjct: 335 RKGLMPSEITFVGVLYACSHCGMVDEG---FDYFKRMKEEYGIVPKIEHYGCMVDLLGRA 391

Query: 324 REIRSARTLFDGMK-SKDVMIWNAVISA 350
             ++ A      M    + ++W  ++ A
Sbjct: 392 GLVKQAHEFIQNMPMQPNAVVWRTLLGA 419


>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71490-like [Glycine max]
          Length = 723

 Score =  343 bits (880), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 199/597 (33%), Positives = 306/597 (51%), Gaps = 37/597 (6%)

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           I ++L AC        GK++H   I  GLD +  + + L+  Y+    LV A+++ +   
Sbjct: 84  IGSLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSN 143

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
             D + W+ +I  Y R G   EAL V + M    I P E    S++    +  D + G  
Sbjct: 144 TLDPLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLE 203

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           +H  +  +  +  L V    AL+ MY + G L  A+ LF+ + +   VSW  +IS Y   
Sbjct: 204 VHRSIEASSMEWSLFVH--NALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASR 261

Query: 254 NEINEGVRLFAEMIEENV-------------------FPSEITILSLIIE---------- 284
               E  +LF  M EE V                   F   + ++S +            
Sbjct: 262 GIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMV 321

Query: 285 -----CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
                C  +G ++LGK +H + +R  F+    + NAL+ MY +CR++  A  LF   + K
Sbjct: 322 VGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFILFHRTEEK 381

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
            ++ WNA++S YA     ++   LF  M    + PN VT+  +L LC     L+ GK  H
Sbjct: 382 GLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHGKEFH 441

Query: 400 TYIEK-QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
            YI K +  E  ++L  ALVDMY++ G V  A ++F     RD   + +M+ GYGM G G
Sbjct: 442 CYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEG 501

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           E  L  F +M +  +KP+ +T + +L ACSH+GLV +G+ +F +M+   G+VP++EHY C
Sbjct: 502 ETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYAC 561

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           M DL GRAGLL++A E I  MP +P   +W  LL A ++H N  MGE AA ++LE++P +
Sbjct: 562 MADLFGRAGLLNKAKEFITGMPYKPTSAMWATLLGACRIHGNTEMGEWAAGKLLEMKPDH 621

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
            GY VL++N+YA A  W  +A VR  M+ + V+K PG + V+V      F+ G   N
Sbjct: 622 SGYYVLIANMYAAAGSWRKLAEVRTYMRNLGVRKAPGCAWVDVGSEFSPFLVGDSSN 678



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 142/478 (29%), Positives = 239/478 (50%), Gaps = 42/478 (8%)

Query: 20  IIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILK 79
           ++   F    +N ++PL  +N L+++Y++N     AL +Y  M     E D +T P++LK
Sbjct: 132 LVDAQFVTESSNTLDPL-HWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLK 190

Query: 80  ACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVS 139
           AC + L  + G E+H     + ++   +V NAL+ MY   G L  AR+LFD MP RD VS
Sbjct: 191 ACGESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVS 250

Query: 140 WSTMIRGYHRGGLPEE-----------------------------------ALEVMREMR 164
           W+T+I  Y   G+ +E                                   AL+++ +MR
Sbjct: 251 WNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMR 310

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
              I    +AM+  ++  + +  + LGK IH   VR C D  +   +  ALI MYS+C +
Sbjct: 311 -TSIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFD--VFDNVKNALITMYSRCRD 367

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           L +A  LF+R  +  +++W  M+SGY   +   E   LF EM++E + P+ +TI S++  
Sbjct: 368 LGHAFILFHRTEEKGLITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEPNYVTIASVLPL 427

Query: 285 CGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
           C  +  LQ GK  H YI+++  FE  L + NALVDMY +   +  AR +FD +  +D + 
Sbjct: 428 CARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEVT 487

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT-YI 402
           + ++I  Y      +   +LF  M   +++P+ VTMV +L+ C+ +G +  G+ L    I
Sbjct: 488 YTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMI 547

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI-CMWNAMMAGYGMHGCGE 459
           +  G+   +     + D++ + G +N A    +   Y+    MW  ++    +HG  E
Sbjct: 548 DVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKPTSAMWATLLGACRIHGNTE 605


>gi|297604972|ref|NP_001056430.2| Os05g0581300 [Oryza sativa Japonica Group]
 gi|255676606|dbj|BAF18344.2| Os05g0581300 [Oryza sativa Japonica Group]
          Length = 704

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 204/604 (33%), Positives = 321/604 (53%), Gaps = 26/604 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNG---SEVDNFTIPTILKACAQV----LMTHLGK 91
           Y +L+  +        A+ +++ +R +    +  D F +  + K+CA       + H   
Sbjct: 35  YATLLAGHAAAGDFPGAMALFSRLRASSPPLAPADPFVLSLVFKSCAAAADARFLPH-AA 93

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            +H FA+++      +V+ AL  +Y++ G L  A  +FDEMP+++VVSW+T++    R G
Sbjct: 94  SLHAFAVRSSAVSSVFVATALADVYAKAGCLGLALKVFDEMPHKNVVSWTTLVASLTRAG 153

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA- 210
              EAL    EMR   +     A  + ++  AD   +  G+ +HA         KLG+  
Sbjct: 154 RRHEALRRFSEMRASGVHCDSYAYAAALTACADAGLLSRGREVHAFCA------KLGLDS 207

Query: 211 ---IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
              +A  L  +Y++C ++  A    +R+    V +WT +IS Y++     E +  F  M+
Sbjct: 208 TPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAWTTVISAYVQTGRAKEAIEAFVRML 267

Query: 268 EEN----VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
            E       P+E T  ++I  C  +  + LG+ LHA   R GF  + ++AN+LV +Y + 
Sbjct: 268 REESSVAASPNEYTYAAVIAACADIAWVCLGEQLHAQAARKGFACARSVANSLVTLYTRA 327

Query: 324 RE-IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK--VRPNEVTMV 380
              + +A  +F     KDV+ W+A+IS YAQ    + AF LF  M+      RPNE T+ 
Sbjct: 328 AGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAEDAFALFREMRHHSGCPRPNEFTLA 387

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
            LLS+C  A +L+ G+ LHT     GLE   ++++AL+DMY K G +  A  +FS  +  
Sbjct: 388 SLLSVCATAASLDAGRQLHTLAVAAGLEHHAMIRSALIDMYGKSGSMLDADIVFSHRVKD 447

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           D+  W AM+ GY  HG  ++AL  F +M   G+KP+ +TFIG+LNAC HAG V  G    
Sbjct: 448 DVVSWTAMIVGYAEHGHSKKALELFQEMCHVGLKPDHVTFIGVLNACCHAGEVELGLRYL 507

Query: 501 DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP-NMIVWGALLAASKLHK 559
           ++M    GL P  EHYGC+VDLLGRAG ++EA E+I  +     + +VW +LL A     
Sbjct: 508 NEMNQIYGLYPAKEHYGCVVDLLGRAGRINEAEELIGKIAANERDGVVWTSLLRACAARG 567

Query: 560 NPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
               G+ AA + +E EP   G +V M+N+YA   +W++ A  R +MK+  V K  G+SS+
Sbjct: 568 EEETGKKAAERAMEAEPWGAGAHVAMANLYASKGQWHEAAQERHMMKQKGVVKGAGWSSI 627

Query: 620 EVNG 623
            V G
Sbjct: 628 TVGG 631



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 230/465 (49%), Gaps = 25/465 (5%)

Query: 111 ALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD--I 168
           A ++  +    L  A  LFD MP RD V+++T++ G+   G    A+ +   +R     +
Sbjct: 6   ARLKQLARSSRLADAHRLFDGMPRRDEVAYATLLAGHAAAGDFPGAMALFSRLRASSPPL 65

Query: 169 RPSEVAMISMV----SLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
            P++  ++S+V    +  AD   +    ++HA  VR+       V +ATAL D+Y+K G 
Sbjct: 66  APADPFVLSLVFKSCAAAADARFLPHAASLHAFAVRSSAVSS--VFVATALADVYAKAGC 123

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           L  A ++F+ +   +VVSWT +++   R    +E +R F+EM    V        + +  
Sbjct: 124 LGLALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTA 183

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
           C   G L  G+ +HA+  + G + +  +AN L  +Y +C ++  A      M ++DV  W
Sbjct: 184 CADAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTRDVAAW 243

Query: 345 NAVISAYAQAHCIDKAFELFIHM----KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
             VISAY Q     +A E F+ M          PNE T   +++ C +   + +G+ LH 
Sbjct: 244 TTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLGEQLHA 303

Query: 401 YIEKQGLEVDVILKTALVDMYAK-CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
              ++G      +  +LV +Y +  G ++ A  +F E++ +D+  W+A+++GY   G  E
Sbjct: 304 QAARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQEGLAE 363

Query: 460 EALIFFVDME-RSGV-KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           +A   F +M   SG  +PN  T   LL+ C+ A  +  G     + +H L +   +EH+ 
Sbjct: 364 DAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAG-----RQLHTLAVAAGLEHHA 418

Query: 518 ----CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
                ++D+ G++G + +A +++ S  ++ +++ W A++     H
Sbjct: 419 MIRSALIDMYGKSGSMLDA-DIVFSHRVKDDVVSWTAMIVGYAEH 462


>gi|255572205|ref|XP_002527042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533604|gb|EEF35342.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 520

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 177/503 (35%), Positives = 300/503 (59%), Gaps = 7/503 (1%)

Query: 43  VTSYIKNNKPSSALNIY-AFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           + +Y KN   + AL ++   ++    + D+FT P++LKAC  +     G+ IH   IK+G
Sbjct: 1   MAAYTKNCMYTEALELFDRLLQYPYLQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSG 60

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
              D  V+++L+ ++++C     A  LFDEMP RDV  W+T+I  Y++ G  E+ALE+  
Sbjct: 61  FVFDIVVASSLVSLHAKCNLFGYAIQLFDEMPERDVACWNTVISCYYQDGKAEKALEMFG 120

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
           +MR     P+ V + +++S  A + D++ GK IH  V++N     L   + +AL+DMY K
Sbjct: 121 KMRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVMQN--GMVLDGFVGSALVDMYGK 178

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
            G L  AK +F ++ + ++V+W  +I+GY    +  E + LF  M  E   P+  T+ S+
Sbjct: 179 FGCLDLAKDIFEQMPKKTLVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTTLSSI 238

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           ++ C     LQ G+++H Y +RN  +  + +++ L+++Y KC +++SA  +F  +   +V
Sbjct: 239 LLACSRAAHLQHGRFIHGYAVRNRVQLDIFVSSGLIELYFKCGKVQSAENIFYMLPKANV 298

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           ++WN +IS Y       KA +++  MK++ V+P+ VT   +LS C++  ALE GK +H  
Sbjct: 299 VLWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLAALEKGKEIHNC 358

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
           I K  LE + I+  AL+DMYAKCG V+ A  +F++   RD+  W ++++ YG HG   EA
Sbjct: 359 ITKNDLETNEIVMGALLDMYAKCGAVDEALSVFNKLPERDLLSWTSIISAYGSHGQALEA 418

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVD 521
           L  F ++++S   P+ +TF+ +L+ACSHAGLV +G   F++M+   G+ P +EHY C++D
Sbjct: 419 LRLFEELQQSKASPDAVTFLAVLSACSHAGLVDKGYYYFNQMITNYGIKPGLEHYSCLID 478

Query: 522 LLGRAGLLDEAHEMIKSMPLRPN 544
           LLGR   + E  + +  +P  PN
Sbjct: 479 LLGR---IQEQSQELNEIPC-PN 497



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 219/386 (56%), Gaps = 3/386 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++++ Y ++ K   AL ++  MR +G E ++ T+ T++ +CA++L    GKEIH   +
Sbjct: 99  WNTVISCYYQDGKAEKALEMFGKMRDSGFEPNSVTLTTVISSCARLLDLERGKEIHREVM 158

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +NG+  D +V +AL+ MY + G L  A+ +F++MP + +V+W+++I GY      +E +E
Sbjct: 159 QNGMVLDGFVGSALVDMYGKFGCLDLAKDIFEQMPKKTLVAWNSLIAGYSSAADSKECIE 218

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M     +P+   + S++   +  A +  G+ IH   VRN    +L + +++ LI++
Sbjct: 219 LFWRMNMEGTKPTVTTLSSILLACSRAAHLQHGRFIHGYAVRN--RVQLDIFVSSGLIEL 276

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KCG +  A+ +F  L + +VV W VMISGY+   +  + + ++ EM   +V P  +T 
Sbjct: 277 YFKCGKVQSAENIFYMLPKANVVLWNVMISGYVTIGDYVKALDMYDEMKIASVKPDAVTF 336

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S++  C  +  L+ GK +H  I +N  E +  +  AL+DMY KC  +  A ++F+ +  
Sbjct: 337 SSILSACSQLAALEKGKEIHNCITKNDLETNEIVMGALLDMYAKCGAVDEALSVFNKLPE 396

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KW 397
           +D++ W ++ISAY       +A  LF  ++ SK  P+ VT + +LS C+ AG ++ G  +
Sbjct: 397 RDLLSWTSIISAYGSHGQALEALRLFEELQQSKASPDAVTFLAVLSACSHAGLVDKGYYY 456

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAK 423
            +  I   G++  +   + L+D+  +
Sbjct: 457 FNQMITNYGIKPGLEHYSCLIDLLGR 482



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 159/291 (54%), Gaps = 3/291 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NSL+  Y         + ++  M   G++    T+ +IL AC++      G+ IHG
Sbjct: 197 LVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTTLSSILLACSRAAHLQHGRFIHG 256

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +A++N +  D +VS+ LI++Y +CG + SA  +F  +P  +VV W+ MI GY   G   +
Sbjct: 257 YAVRNRVQLDIFVSSGLIELYFKCGKVQSAENIFYMLPKANVVLWNVMISGYVTIGDYVK 316

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL++  EM+   ++P  V   S++S  + +A ++ GK IH C+ +N  D +    +  AL
Sbjct: 317 ALDMYDEMKIASVKPDAVTFSSILSACSQLAALEKGKEIHNCITKN--DLETNEIVMGAL 374

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +DMY+KCG +  A  +FN+L +  ++SWT +IS Y    +  E +RLF E+ +    P  
Sbjct: 375 LDMYAKCGAVDEALSVFNKLPERDLLSWTSIISAYGSHGQALEALRLFEELQQSKASPDA 434

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCRE 325
           +T L+++  C   G +  G +    ++ N G +  L   + L+D+ G+ +E
Sbjct: 435 VTFLAVLSACSHAGLVDKGYYYFNQMITNYGIKPGLEHYSCLIDLLGRIQE 485


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 187/446 (41%), Positives = 263/446 (58%), Gaps = 36/446 (8%)

Query: 219 YSKCGNLAYAKQLFNR-LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           YS   NL     LFN+ +++ +V SW  +I+   R  +  E +R F+ M + ++ P+  T
Sbjct: 22  YSNNPNLT---TLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRST 78

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD--- 334
               I  C  +  L  G+  H   L  GFE  L +++ALVDMY KC E+R ARTLFD   
Sbjct: 79  FPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEIS 138

Query: 335 ----------------------------GMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
                                       GM  +DV+ WN++I+ YAQ     ++ E+F  
Sbjct: 139 HRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHR 198

Query: 367 M-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
           M K  ++  N VT+  +L  C  +G+  +GK +H  + K GLE +V + T+++DMY KCG
Sbjct: 199 MVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCG 258

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
            V  A + F     +++  W+AM+AGYGMHG  +EAL  F +M  +GVKPN ITF+ +L 
Sbjct: 259 KVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLA 318

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
           ACSHAGL+ EG   F  M H   + P +EHYGCMVDLLGRAG L EA ++IK M LRP+ 
Sbjct: 319 ACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDF 378

Query: 546 IVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVM 605
           +VWGALL A ++HKN  +GEI+A ++ E++P+N GY VL+SNIYA A RW DV  +R +M
Sbjct: 379 VVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILM 438

Query: 606 KEIRVKKEPGFSSVEVNGLVHKFIRG 631
           K   + K PGFS V++ G VH F+ G
Sbjct: 439 KNSGLVKPPGFSLVDIKGRVHVFLVG 464



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 175/346 (50%), Gaps = 36/346 (10%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++    ++     AL  ++ MRK   + +  T P  +K+C+ +L  H G++ H  A+
Sbjct: 44  WNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQAL 103

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY------HRG-- 150
             G + D +VS+AL+ MYS+CG L  AR LFDE+ +R++VSW++MI GY      HR   
Sbjct: 104 IFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALR 163

Query: 151 -----------------------GLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVA 186
                                  G+  E++E+   M +  +I  + V + +++   A   
Sbjct: 164 VFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSG 223

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
              LGK IH  V++   +    V + T++IDMY KCG +  A++ F+R+ + +V SW+ M
Sbjct: 224 SQRLGKCIHDQVIKMGLES--NVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAM 281

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG-KWLHAYILRNG 305
           ++GY       E + +F EM    V P+ IT +S++  C   G L+ G  W  A      
Sbjct: 282 VAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFD 341

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISA 350
            E  +     +VD+ G+   ++ A  L  GMK + D ++W A++ A
Sbjct: 342 VEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGA 387



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 181/363 (49%), Gaps = 37/363 (10%)

Query: 128 LFDEMPNR-DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
           LF++  ++ +V SW+++I    R G   EAL     MR + ++P+       +   + + 
Sbjct: 31  LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
           D+  G+  H   +    +  L V+  +AL+DMYSKCG L  A+ LF+ ++  ++VSWT M
Sbjct: 91  DLHSGRQAHQQALIFGFEPDLFVS--SALVDMYSKCGELRDARTLFDEISHRNIVSWTSM 148

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFP--------------------------------S 274
           I+GY++ ++ +  +R+F  M E +V                                  +
Sbjct: 149 ITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYN 208

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            +T+ ++++ C   G  +LGK +H  +++ G E ++ +  +++DMY KC ++  AR  FD
Sbjct: 209 AVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFD 268

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M+ K+V  W+A+++ Y       +A E+F  M ++ V+PN +T V +L+ C+ AG LE 
Sbjct: 269 RMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEE 328

Query: 395 G-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGY 452
           G  W      +  +E  V     +VD+  + G +  A+ L      R D  +W A++   
Sbjct: 329 GWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGAC 388

Query: 453 GMH 455
            MH
Sbjct: 389 RMH 391


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 205/607 (33%), Positives = 326/607 (53%), Gaps = 24/607 (3%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRK-NGSEVDNFTIPTILKACAQVLM----THLGKEIH 94
           N L+   +K  +  +A  ++  M+   G   D++ +  +L A ++  +       G+E+H
Sbjct: 352 NGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVV--LLSAFSEFSVLEEGRRKGREVH 409

Query: 95  GFAIKNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
              I+ GL D    + N L+ MY++ G++  A  +F+ M  +D VSW+++I G  +    
Sbjct: 410 AHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECS 469

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----V 209
           E+A E    MR     PS   +IS +S  A +  + LG+ IH      C   KLG    V
Sbjct: 470 EDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIH------CDGLKLGLDTDV 523

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE--INEGVRLFAEMI 267
           +++ AL+ +Y++ G      ++F+ + +   VSW  +I G +  +E  +++ V+ F +M+
Sbjct: 524 SVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVI-GALSDSEASVSQAVKYFLQMM 582

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
                 S +T ++++     +   ++   +HA +L+       A+ NAL+  YGKC E+ 
Sbjct: 583 RGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMN 642

Query: 328 SARTLFDGM-KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
               +F  M +++D + WN++IS Y     + KA +L   M     R +  T   +LS C
Sbjct: 643 ECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSAC 702

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
                LE G  +H    +  LE DV++ +ALVDMY+KCG ++ A R F     R++  WN
Sbjct: 703 ASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWN 762

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           +M++GY  HG GE+AL  F  M   G  P+ +TF+G+L+ACSH G V EG   F  M   
Sbjct: 763 SMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEV 822

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA--SKLHKNPSMG 564
             L P++EH+ CMVDLLGRAG LDE  + I SMP++PN+++W  +L A      +N  +G
Sbjct: 823 YRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELG 882

Query: 565 EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
             AA  +LE+EPQN    VL++N+YA   +W DVA  R  MKE  VKKE G S V +   
Sbjct: 883 RRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDG 942

Query: 625 VHKFIRG 631
           VH F+ G
Sbjct: 943 VHVFVAG 949



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 219/448 (48%), Gaps = 40/448 (8%)

Query: 14  RQCHAHIIKTHFKFSYTNIINPLTR-------------------------YNSLVTSYIK 48
           R+ HAH+I+T    +   I N L                           +NSL++   +
Sbjct: 406 REVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQ 465

Query: 49  NNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYV 108
           N     A   +  MR+ GS   NFT+ + L +CA +    LG++IH   +K GLD D  V
Sbjct: 466 NECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSV 525

Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR-FMD 167
           SNAL+ +Y+E G       +F  MP  D VSW+++I     G L +    V + ++ F+ 
Sbjct: 526 SNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVI-----GALSDSEASVSQAVKYFLQ 580

Query: 168 IRP-----SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC 222
           +       S V  I+++S  + ++  ++   IHA V++ C  +    AI  AL+  Y KC
Sbjct: 581 MMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDD--TAIGNALLSCYGKC 638

Query: 223 GNLAYAKQLFNRLNQN-SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
           G +   +++F R+++    VSW  MISGYI    +++ + L   M+++       T  ++
Sbjct: 639 GEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATI 698

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +  C  V  L+ G  +HA  +R   E  + + +ALVDMY KC  I  A   F+ M  ++V
Sbjct: 699 LSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNV 758

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHT 400
             WN++IS YA+    +KA +LF  M +    P+ VT VG+LS C+  G +E G +   +
Sbjct: 759 YSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKS 818

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVN 428
             E   L   V   + +VD+  + G ++
Sbjct: 819 MSEVYRLSPRVEHFSCMVDLLGRAGKLD 846



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 140/537 (26%), Positives = 254/537 (47%), Gaps = 25/537 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT--HLGKEI 93
           L  +  L++ Y +N KP  A   +  M + G   +++   + L+AC +   +   LG +I
Sbjct: 137 LVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQI 196

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSEC-GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           HG   K     D  V N LI MY  C  S   AR +FD +  R+ +SW+++I  Y R G 
Sbjct: 197 HGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGD 256

Query: 153 PEEALEVMREMRF----MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEK 206
              A ++   M+        +P+E    S+++     + VD G     CV+     + EK
Sbjct: 257 AVSAYDLFSSMQKEGLGFSFKPNEYTFGSLIT--TACSSVDFG----LCVLEQMLARVEK 310

Query: 207 LG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
            G    + +++AL+  +++ G    AK +F ++   +VVS   ++ G ++  +     ++
Sbjct: 311 SGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKV 370

Query: 263 FAEMIEENVFPSE--ITILSLIIECGFV-GGLQLGKWLHAYILRNGF-EFSLAMANALVD 318
           F EM +     S+  + +LS   E   +  G + G+ +HA+++R G  +  +A+ N LV+
Sbjct: 371 FHEMKDLVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVN 430

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
           MY K   I  A ++F+ M  KD + WN++IS   Q  C + A E F  M+ +   P+  T
Sbjct: 431 MYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFT 490

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
           ++  LS C   G + +G+ +H    K GL+ DV +  AL+ +YA+ G      ++FS   
Sbjct: 491 LISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP 550

Query: 439 YRDICMWNAMMAGYG-MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
             D   WN+++           +A+ +F+ M R G   + +TFI +L+A S   L  E  
Sbjct: 551 EYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSL-HEVS 609

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
                +V    L         ++   G+ G ++E  ++   M    + + W ++++ 
Sbjct: 610 HQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISG 666



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 137/481 (28%), Positives = 236/481 (49%), Gaps = 23/481 (4%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
            +E+H  +IK G  G+ ++SN LI +Y   G L SA+ LFDEM NR++V+W+ +I GY +
Sbjct: 90  ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 149

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV--ADVDLGKAIHACVVRNCKDEKL 207
            G P+EA    R+M      P+  A  S +    +   +   LG  IH  + +     + 
Sbjct: 150 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKT----RY 205

Query: 208 G--VAIATALIDMYSKCGNLAY-AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
           G  V +   LI MY  C + A  A+ +F+ +   + +SW  +IS Y R  +      LF+
Sbjct: 206 GSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFS 265

Query: 265 EMIEENV----FPSEITILSLIIE-CGFVG-GLQLGKWLHAYILRNGFEFSLAMANALVD 318
            M +E +     P+E T  SLI   C  V  GL + + + A + ++GF   L +++ALV 
Sbjct: 266 SMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVS 325

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
            + +      A+ +F+ M  ++V+  N ++    +    + A ++F  MK   V  N  +
Sbjct: 326 GFARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMK-DLVGINSDS 384

Query: 379 MVGLLSLCTEAGALE----MGKWLHTYIEKQGL-EVDVILKTALVDMYAKCGDVNGAYRL 433
            V LLS  +E   LE     G+ +H ++ + GL +  V +   LV+MYAK G +  A  +
Sbjct: 385 YVVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSV 444

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F   + +D   WN++++G   + C E+A   F  M R+G  P+  T I  L++C+  G +
Sbjct: 445 FELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWI 504

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
             G+ +    +  LGL   +     ++ L    G   E  ++   MP   + + W +++ 
Sbjct: 505 MLGEQIHCDGLK-LGLDTDVSVSNALLALYAETGCFTECLKVFSLMP-EYDQVSWNSVIG 562

Query: 554 A 554
           A
Sbjct: 563 A 563



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 116/233 (49%), Gaps = 3/233 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++ YI N     A+++  FM + G  +D+FT  TIL ACA V     G E+H   I
Sbjct: 660 WNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGI 719

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           +  L+ D  V +AL+ MYS+CG +  A   F+ MP R+V SW++MI GY R G  E+AL+
Sbjct: 720 RACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALK 779

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M      P  V  + ++S  + V  V+ G   H   +         V   + ++D+
Sbjct: 780 LFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEGFE-HFKSMSEVYRLSPRVEHFSCMVDL 838

Query: 219 YSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGV-RLFAEMIEE 269
             + G L       N +  + +V+ W  ++    R N  N  + R  AEM+ E
Sbjct: 839 LGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLE 891



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 6/143 (4%)

Query: 355 HCIDKAFELFIHMKVSKVRPNEV------TMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
            C     +L  H K S    N        T   L++    +   E  + LH    K G  
Sbjct: 44  QCTKSLQDLVDHYKTSTSHCNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFV 103

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            ++ L   L+++Y + GD+  A +LF E   R++  W  +++GY  +G  +EA   F DM
Sbjct: 104 GNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDM 163

Query: 469 ERSGVKPNGITFIGLLNACSHAG 491
            R+G  PN   F   L AC  +G
Sbjct: 164 VRAGFIPNHYAFGSALRACQESG 186


>gi|302791495|ref|XP_002977514.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
 gi|300154884|gb|EFJ21518.1| hypothetical protein SELMODRAFT_107304 [Selaginella moellendorffii]
          Length = 673

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 197/576 (34%), Positives = 310/576 (53%), Gaps = 21/576 (3%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVL----MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYS 117
           M  +G   +      +L+ACA+       + L  EI    +  G D D  V+ ALI   +
Sbjct: 1   MELDGCRPNAVIFTRLLEACARSPEKSDRSRLA-EIQFRVVATGFDADVTVATALISALA 59

Query: 118 ECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMIS 177
            CG L  AR  FD +P ++VVSW++MI   +  G    ALE+ R M    ++PS+++ I 
Sbjct: 60  RCGDLEGAREAFDRIPAKNVVSWNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIH 119

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
            +   + + D++ GK+IH  V  +  D +  V +  AL++MYSKC  L  A++ F R++ 
Sbjct: 120 ALCSCSGLRDLEQGKSIHDRVATDGFDTQ--VFVGNALVNMYSKCRRLDLAREAFERIDS 177

Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMI-EENVFPSEITILSLIIECGFVGGLQLGKW 296
             VVSW  MI+ + +    +E +  +  MI EE + P++IT++  +     +      K 
Sbjct: 178 KDVVSWNSMIAAHSQLGGSDEALETYRRMIGEERLEPTKITLVHALGAALSLRSAGDTKL 237

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           L    +R G E  L + +ALV   GKC  +  AR +FD M+ ++V+ W+ +I+A A+   
Sbjct: 238 LQEDAIRLGLEGDLLVGSALVSALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGR 297

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
              A ELF  M +  ++PNEVT++ +L  C   GA+  G+  H  +   G E +  +  A
Sbjct: 298 GRDAIELFHRMDLDGIQPNEVTLLSVLEACASTGAIAEGRRTHARVSGCGFEAETNVANA 357

Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
           LV+MY KCG +  A  +F    +R++  W AM+AGY  HG  EEA   F  M   G++PN
Sbjct: 358 LVNMYGKCGHLGSARTVFDAMTWRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPN 417

Query: 477 GITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
            ITF+ +L  CSHAG+V++G   F  MV   G+VP  EHYGC++DLLGRAG L+EA E++
Sbjct: 418 VITFVSVLFNCSHAGVVSDGLEQFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEELL 477

Query: 537 KSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE-PQNYGYNVLMSNIYAVANRW 595
           ++MP+ P+   W +LL A K+H +    +  A    ++  P      VL+SN+Y    + 
Sbjct: 478 RTMPVEPDKAAWNSLLGACKVHSHTDRAKRIAKLACDLALPFASAPYVLLSNMYTDEEQQ 537

Query: 596 NDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +D             +++   S +EV G VH+F+ G
Sbjct: 538 SD------------PEEDQCSSLIEVKGRVHEFVAG 561



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 216/420 (51%), Gaps = 5/420 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++ +  ++   + AL IY  M   G +  + +    L +C+ +     GK IH    
Sbjct: 82  WNSMIAALNEHGHFARALEIYRRMEPEGVKPSDISYIHALCSCSGLRDLEQGKSIHDRVA 141

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            +G D   +V NAL+ MYS+C  L  AR  F+ + ++DVVSW++MI  + + G  +EALE
Sbjct: 142 TDGFDTQVFVGNALVNMYSKCRRLDLAREAFERIDSKDVVSWNSMIAAHSQLGGSDEALE 201

Query: 159 VMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
             R M   + + P+++ ++  +     +      K +    +R   +  L   + +AL+ 
Sbjct: 202 TYRRMIGEERLEPTKITLVHALGAALSLRSAGDTKLLQEDAIRLGLEGDL--LVGSALVS 259

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
              KCG L  A+ +F+R+ + +VVSW+ +I+         + + LF  M  + + P+E+T
Sbjct: 260 ALGKCGCLDQARAVFDRMERRNVVSWSGLIAALAEHGRGRDAIELFHRMDLDGIQPNEVT 319

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           +LS++  C   G +  G+  HA +   GFE    +ANALV+MYGKC  + SART+FD M 
Sbjct: 320 LLSVLEACASTGAIAEGRRTHARVSGCGFEAETNVANALVNMYGKCGHLGSARTVFDAMT 379

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-K 396
            ++V+ W A+++ YA     ++A  +F  M +  ++PN +T V +L  C+ AG +  G +
Sbjct: 380 WRNVVSWTAMLAGYAHHGHTEEARRVFKAMALEGIQPNVITFVSVLFNCSHAGVVSDGLE 439

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMH 455
             H  +   G+         ++D+  + G +  A  L  +  +  D   WN+++    +H
Sbjct: 440 QFHIMVGDFGIVPVTEHYGCVIDLLGRAGWLEEAEELLRTMPVEPDKAAWNSLLGACKVH 499


>gi|242086060|ref|XP_002443455.1| hypothetical protein SORBIDRAFT_08g019750 [Sorghum bicolor]
 gi|241944148|gb|EES17293.1| hypothetical protein SORBIDRAFT_08g019750 [Sorghum bicolor]
          Length = 565

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 188/564 (33%), Positives = 314/564 (55%), Gaps = 11/564 (1%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEI---HGFAIKNGLDGDAYVSNALIQMYSE 118
           M + G+  D FT+P + +A A  L+   G  +   H   ++ GL GD Y  N L+Q Y+ 
Sbjct: 1   MLRAGARPDAFTLPLLNRAAA--LLPGRGLAVGAAHSVGLRAGLGGDTYFCNTLLQAYAR 58

Query: 119 CGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISM 178
            G++  AR LFDEM  RDVVSW++++  Y      +    ++ EMR     PS   +  +
Sbjct: 59  RGAVGRARQLFDEMQTRDVVSWTSLVSAYAGARDAQAVSRLVSEMRADGCEPSAATLAVL 118

Query: 179 VSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
           +       D   G  +H   V++       V +  +++   S+   +  A +LF +  ++
Sbjct: 119 LQACMAERDAAAGGQLHCYAVKSGWSGD--VVVLNSILTHLSRITGVDVAVRLFEQSPRS 176

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
             VSW ++IS Y     +++ V ++  M  E V PS  T+ S++        L+ G+ LH
Sbjct: 177 DAVSWNIIISEYSSEGRVSKVVDMYERMRREEVCPSCETLTSVVAAFAKCRHLRQGQKLH 236

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
           ++ L++G   ++ +A+  VD Y KC E+ S+  LF+  + K   IW+A+++A+       
Sbjct: 237 SFGLKSGLIDTILVAS-FVDFYAKCGELPSSVQLFEEFRGKSNCIWSAMLAAFIHHGQFL 295

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD---VILKT 415
            A  LF  M  S + P+   +  L+   TE G L +GK +H YI +     +     L+T
Sbjct: 296 DAIHLFGRMIDSSLVPSADVLRALVICYTELGDLRLGKVVHGYIIRNNCAAESHSCALET 355

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           ++V +YA+CG+++ A R FS  +++D   W++M+  Y +HG G +AL  F  M   G +P
Sbjct: 356 SIVKLYARCGNIHLAERCFSSILHKDSISWSSMIETYTIHGDGRKALALFRQMLEEGARP 415

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEM 535
           NG+TF+ LL+AC H+GLV+E + +FD M    G+ P++ HY CMVD+LGR+G L+EA ++
Sbjct: 416 NGVTFLSLLSACGHSGLVSEARELFDCMTRKFGIAPELGHYTCMVDVLGRSGNLEEAVQL 475

Query: 536 IKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRW 595
           I  M ++P+  +WGALLA+ K H N  +  +AA +++E+EP N GY+V+ SN+ A  +RW
Sbjct: 476 INGMTVKPDGRIWGALLASCKTHSNSKLANLAARKLMELEPNNVGYHVVFSNVQAGGSRW 535

Query: 596 NDVAGVRRVMKEIRVKKEPGFSSV 619
            +V  +R  M +  ++K P +S V
Sbjct: 536 GEVEDIRSSMVDKDMQKSPAWSRV 559



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 210/422 (49%), Gaps = 8/422 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + SLV++Y       +   + + MR +G E    T+  +L+AC        G ++H +A+
Sbjct: 80  WTSLVSAYAGARDAQAVSRLVSEMRADGCEPSAATLAVLLQACMAERDAAAGGQLHCYAV 139

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G  GD  V N+++   S    +  A  LF++ P  D VSW+ +I  Y   G   + ++
Sbjct: 140 KSGWSGDVVVLNSILTHLSRITGVDVAVRLFEQSPRSDAVSWNIIISEYSSEGRVSKVVD 199

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   MR  ++ PS   + S+V+ FA    +  G+ +H+  +++   + + VA   + +D 
Sbjct: 200 MYERMRREEVCPSCETLTSVVAAFAKCRHLRQGQKLHSFGLKSGLIDTILVA---SFVDF 256

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+KCG L  + QLF      S   W+ M++ +I   +  + + LF  MI+ ++ PS   +
Sbjct: 257 YAKCGELPSSVQLFEEFRGKSNCIWSAMLAAFIHHGQFLDAIHLFGRMIDSSLVPSADVL 316

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGF---EFSLAMANALVDMYGKCREIRSARTLFDG 335
            +L+I    +G L+LGK +H YI+RN       S A+  ++V +Y +C  I  A   F  
Sbjct: 317 RALVICYTELGDLRLGKVVHGYIIRNNCAAESHSCALETSIVKLYARCGNIHLAERCFSS 376

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +  KD + W+++I  Y       KA  LF  M     RPN VT + LLS C  +G +   
Sbjct: 377 ILHKDSISWSSMIETYTIHGDGRKALALFRQMLEEGARPNGVTFLSLLSACGHSGLVSEA 436

Query: 396 KWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYG 453
           + L   + ++ G+  ++   T +VD+  + G++  A +L +   +  D  +W A++A   
Sbjct: 437 RELFDCMTRKFGIAPELGHYTCMVDVLGRSGNLEEAVQLINGMTVKPDGRIWGALLASCK 496

Query: 454 MH 455
            H
Sbjct: 497 TH 498


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 179/572 (31%), Positives = 306/572 (53%), Gaps = 6/572 (1%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           M   G  V   +   + +AC ++     G+  H    +   +   ++ N++++MY +CGS
Sbjct: 1   MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           L  AR +FDEM  R++VSW+T+I  Y   G+ ++   +   M  ++ +P+    I  +  
Sbjct: 61  LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRS 120

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
             + + +++GK IH+  +R+     LG   ++ TA+ +MY KCG L  A+ +F ++++ +
Sbjct: 121 LLNPSGLEIGKQIHSHAIRS----GLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKN 176

Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
            V+WT ++ GY +     + + LFA+M+ E V   E     ++  C  +  L  G+ +H 
Sbjct: 177 AVAWTGIMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHG 236

Query: 300 YILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
           +I++ G E  +++   LVD Y KC  + SA   F+ +   + + W+A+I+ Y Q    ++
Sbjct: 237 HIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEE 296

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVD 419
           A + F  ++   V  N  T   +   C+       G   H    K  L      ++A++ 
Sbjct: 297 ALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMIT 356

Query: 420 MYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGIT 479
           MY++CG ++ A R+F      D   W A++AGY   G   EAL  F  M+  GV+PN +T
Sbjct: 357 MYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVT 416

Query: 480 FIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM 539
           FI +L ACSH+GLV EG+   + M    G+   I+HY CMVD+  RAG L EA E+I+SM
Sbjct: 417 FIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSM 476

Query: 540 PLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVA 599
           P  P+ + W  LL     ++N  +GE+AA  + +++P++    +LM N+YA   +W + A
Sbjct: 477 PFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAA 536

Query: 600 GVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            VR++M E  ++KE   S + V G VH+FI G
Sbjct: 537 NVRKMMAERNLRKELSCSWITVKGKVHRFIVG 568



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 207/422 (49%), Gaps = 12/422 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++++Y +N        +++ M +  ++ +  T    L++        +GK+IH 
Sbjct: 76  LVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHS 135

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            AI++GL  +A V+ A+  MY +CG L  A  +F++M  ++ V+W+ ++ GY +     +
Sbjct: 136 HAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMD 195

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAI 211
           AL +  +M    +   E     ++   A + +++ G+ IH  +V      KLG    V++
Sbjct: 196 ALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIV------KLGLESEVSV 249

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
            T L+D Y KC NL  A + F  +++ + VSW+ +I+GY +  E  E ++ F  +   +V
Sbjct: 250 GTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSV 309

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
             +  T  S+   C  +     G   HA  +++         +A++ MY +C  +  A  
Sbjct: 310 DINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATR 369

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG- 390
           +F+ +   D + W A+I+ YA      +A +LF  M+   VRPN VT + +L+ C+ +G 
Sbjct: 370 VFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGL 429

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMM 449
            +E  ++L +     G+   +     +VD+Y++ G +  A  L     +  D   W  ++
Sbjct: 430 VIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLL 489

Query: 450 AG 451
            G
Sbjct: 490 GG 491


>gi|357116106|ref|XP_003559825.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Brachypodium distachyon]
          Length = 739

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 208/619 (33%), Positives = 330/619 (53%), Gaps = 28/619 (4%)

Query: 26  KFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACA-- 82
           K  +T     ++ YN+++++     +   AL   A+M ++G    D  T+   L   A  
Sbjct: 94  KVFHTARARDVSSYNTILSALPDRGE---ALAFAAWMLRSGDVRPDAVTLTVALSLAASR 150

Query: 83  -QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWS 141
            +     + +++H  A ++GL  D +V NAL+  YS    L +AR +FDEMP RD+VSW+
Sbjct: 151 GEADGVWIVRQLHALASRSGLVADVFVGNALVTAYSRGALLGAARRVFDEMPARDLVSWN 210

Query: 142 TMIRGYHRGG-LPEEALEVMREMRFMD-----IRPSEVAMISMVSLFADVADVDLGKAIH 195
            MI G  + G  P E + V   +R +      +RP  +++ S++        ++LG+ +H
Sbjct: 211 AMICGLAQDGDCPTEVILVF--LRLLKDGGAAVRPDRISVCSVIPACGSEGKIELGRQVH 268

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
           +  V+   + K  V+I   L+ MY K G    A++L   +++  V+SWT  IS     + 
Sbjct: 269 SFTVKLGVEGK--VSIGNVLVAMYYKSGAAGCARKLLKSMDERDVISWTTAIS----MDG 322

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
             + + LF  M ++ V P+E+T ++L+         + G+ +H   L+ G     A AN+
Sbjct: 323 EEDAIELFNGMRQDGVPPNEVTFVALMSALAAGCPARYGQMIHTVCLKTGVSDEAAAANS 382

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
           L+ MY K R +  ART+FD M   +++ WNA+IS YAQ    ++A ++F  M V  +RPN
Sbjct: 383 LITMYAKLRRMDDARTVFDRMPRPEIIAWNALISGYAQNELCNEALQVFSCM-VRCLRPN 441

Query: 376 EVTMVGLLSLCTEAGALEM--GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           E T   +LS  T    + M  G+  H    K GL+V   +  AL+DMYAK G +  + + 
Sbjct: 442 ETTFASVLSAVTAVETVSMAYGEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKA 501

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F   ++R +  W A+++ +  HG  +  +  F DM  SGV P+G+  + +L AC H+G V
Sbjct: 502 FDVTVHRSLIAWTAIISAHAKHGNYDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAV 561

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
             G+ +FD M     + P  EHY C++D+LGRAG L+EA E++  MP  P++    +LL 
Sbjct: 562 NTGREIFDSMPAEHHVEPWPEHYACVIDMLGRAGRLEEAEELMLQMPTGPSVSALQSLLG 621

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           A ++H N S+ E  A  + E EP   G  VL+SNIYA    W  VA VRR M+E  V+KE
Sbjct: 622 ACRIHGNTSIAERVAGILTETEPTESGAYVLLSNIYAEKGDWGGVAKVRREMREKGVRKE 681

Query: 614 PGFSSVEVNG----LVHKF 628
            GFS V+        +HKF
Sbjct: 682 IGFSWVDFGAGESLHLHKF 700



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 151/523 (28%), Positives = 250/523 (47%), Gaps = 39/523 (7%)

Query: 51  KPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSN 110
           +P+S L + A      +     ++P  L A            +HG AI +GLD  ++V+N
Sbjct: 29  RPTSTLPLLASSPAAFTAAVPSSVPANLPA------------LHGLAIASGLDAFSFVTN 76

Query: 111 ALIQMYSE-CGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDI 168
           +L   Y++   S  SA  +F     RDV S++T++      G   EAL     M R  D+
Sbjct: 77  SLAARYAKSASSFPSAAKVFHTARARDVSSYNTILSALPDRG---EALAFAAWMLRSGDV 133

Query: 169 RPSEVAMISMVSLFADVADVD---LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
           RP  V +   +SL A   + D   + + +HA   R+       V +  AL+  YS+   L
Sbjct: 134 RPDAVTLTVALSLAASRGEADGVWIVRQLHALASRS--GLVADVFVGNALVTAYSRGALL 191

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEI-NEGVRLFAEMIEEN---VFPSEITILSL 281
             A+++F+ +    +VSW  MI G  +  +   E + +F  ++++    V P  I++ S+
Sbjct: 192 GAARRVFDEMPARDLVSWNAMICGLAQDGDCPTEVILVFLRLLKDGGAAVRPDRISVCSV 251

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           I  CG  G ++LG+ +H++ ++ G E  +++ N LV MY K      AR L   M  +DV
Sbjct: 252 IPACGSEGKIELGRQVHSFTVKLGVEGKVSIGNVLVAMYYKSGAAGCARKLLKSMDERDV 311

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           + W   IS   +    + A ELF  M+   V PNEVT V L+S          G+ +HT 
Sbjct: 312 ISWTTAISMDGE----EDAIELFNGMRQDGVPPNEVTFVALMSALAAGCPARYGQMIHTV 367

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
             K G+  +     +L+ MYAK   ++ A  +F      +I  WNA+++GY  +    EA
Sbjct: 368 CLKTGVSDEAAAANSLITMYAKLRRMDDARTVFDRMPRPEIIAWNALISGYAQNELCNEA 427

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH--GLGLVPKIEHY--G 517
           L  F  M R  ++PN  TF  +L+A +    V+     + +M H   L L  K+  Y  G
Sbjct: 428 LQVFSCMVRC-LRPNETTFASVLSAVTAVETVSMA---YGEMYHCQSLKLGLKVSEYVSG 483

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
            ++D+  + G L+E+ +       R ++I W A+++A   H N
Sbjct: 484 ALIDMYAKRGSLEESRKAFDVTVHR-SLIAWTAIISAHAKHGN 525


>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Cucumis sativus]
          Length = 704

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 192/594 (32%), Positives = 318/594 (53%), Gaps = 5/594 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  +I      ++ ++   MR  G E+D +T  ++LK  A   M HLG+++H   I
Sbjct: 67  WNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIII 126

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   + Y  +AL+ MY++C  L  A   F  +   + VSW+ MI GY + G  E A  
Sbjct: 127 KMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFW 186

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++  M     +  +     ++ L  D    +L   +H  ++++    +L   +  ALI  
Sbjct: 187 LLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKH--GLELVNTMCNALITS 244

Query: 219 YSKCGNLAYAKQLFNR-LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           YSKCG+L  AK++F+       +V+W  +++ Y+  ++ +   +L  +M E    P   +
Sbjct: 245 YSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYS 304

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR--EIRSARTLFDG 335
             S+I  C        G+ LH  +++ GFE S+ ++NAL+ MY K     ++ A  +F+ 
Sbjct: 305 YTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFES 364

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++ KD + WN++++  +Q    + A + F+HM+ + +  +  +   +L  C++    ++G
Sbjct: 365 LEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLG 424

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H    K GLE +  + ++L+ MY+KCG +  A R F EA       WNA+M GY  H
Sbjct: 425 QQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQH 484

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G    AL  F  ME   VK + ITF+ +L ACSH GLV +G      M    G+ P++EH
Sbjct: 485 GQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEH 544

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y C VDL GR+G L+EA  +I+ MP +P+  VW   L A +   N  +    A  +LE+E
Sbjct: 545 YACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEME 604

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           P+ +   VL+SN+Y    RW++ A V+R+MKE  VKK PG+S +EVN  VH FI
Sbjct: 605 PEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFI 658



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 231/495 (46%), Gaps = 27/495 (5%)

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           + T  +A A +L+ H        A+K G   D Y  N ++  Y +C  L SA  LFDEMP
Sbjct: 7   VGTSFRALANLLLNH------SLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMP 60

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
            RD VSW+TMI G+   G  E + +V+R MR            SM+   A      LG+ 
Sbjct: 61  MRDSVSWNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQ 120

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           +H+ +++    E   V   +AL+DMY+KC  L  A   F  +++++ VSW  MI+GY + 
Sbjct: 121 VHSIIIKMGYAEN--VYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQA 178

Query: 254 NEINEGVRLFAEMIEENVFPSEIT---ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
            +      L   M +E     + T   +L L+ +  F     L   LH  I+++G E   
Sbjct: 179 GDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFC---NLTSQLHGKIIKHGLELVN 235

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKS-KDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
            M NAL+  Y KC  +  A+ +FD     +D++ WN++++AY      D AF+L I M+ 
Sbjct: 236 TMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQE 295

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC--GDV 427
               P+  +   ++S C        G+ LH  + K+G E  V +  AL+ MY K   G +
Sbjct: 296 HGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSM 355

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             A  +F    ++D   WN+++ G    G  E+A+  F+ M  + +  +  +F  +L +C
Sbjct: 356 KEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSC 415

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           S       G+      +H L L   +E        ++ +  + G++++A    +    + 
Sbjct: 416 SDLATFQLGQQ-----IHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEAS-KN 469

Query: 544 NMIVWGALLAASKLH 558
           + I W AL+     H
Sbjct: 470 SSITWNALMFGYAQH 484



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 184/366 (50%), Gaps = 16/366 (4%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           F  +  I  L  +NSL+ +Y+  ++   A  +   M+++G E D ++  +I+ AC    +
Sbjct: 258 FDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENI 317

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMY--SECGSLVSARYLFDEMPNRDVVSWSTMI 144
           ++ G+ +HG  IK G +    +SNALI MY  S+ GS+  A  +F+ +  +D VSW++++
Sbjct: 318 SNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSIL 377

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
            G  + G  E+A++    MR   +     +  +++   +D+A   LG+ IH   +     
Sbjct: 378 TGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLAL----- 432

Query: 205 EKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
            K G+     ++++LI MYSKCG +  A++ F   ++NS ++W  ++ GY +  + N  +
Sbjct: 433 -KYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVAL 491

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDM 319
            LF  M E+ V    IT ++++  C  +G ++ G K+L       G    +      VD+
Sbjct: 492 DLFFLMEEKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDL 551

Query: 320 YGKCREIRSARTLFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
           YG+   +  A+ L + M  K D  +W   + A      I+ A ++  H+   ++ P E  
Sbjct: 552 YGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLL--EMEPEEHC 609

Query: 379 MVGLLS 384
              LLS
Sbjct: 610 TYVLLS 615



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 5/295 (1%)

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           H+  ++ G    +   N +++ Y KC+E+RSA  LFD M  +D + WN +I+ +     +
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
           + ++++   M+      +  T   +L     AG   +G+ +H+ I K G   +V   +AL
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140

Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
           +DMYAKC  +  AY  F      +   WNAM+ GY   G  E A      ME+ G K + 
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDD 200

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
            T+  LL     A        +  K++ HGL LV  +     ++    + G LD+A  + 
Sbjct: 201 GTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTM--CNALITSYSKCGSLDDAKRIF 258

Query: 537 KSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMSNIY 589
            S     +++ W +LLAA  L     +       + E   EP  Y Y  ++S  +
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACF 313


>gi|147784524|emb|CAN61725.1| hypothetical protein VITISV_032420 [Vitis vinifera]
          Length = 763

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 181/522 (34%), Positives = 289/522 (55%), Gaps = 8/522 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + S++  Y +N +  +AL  Y  M ++G   D FT  +I+KAC+ +    LG+++H   +
Sbjct: 132 WTSVIAGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVL 191

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+         NALI MY++   ++ A  +F  M  RD++SW +MI G+ + G   EAL 
Sbjct: 192 KSEFGAHIIAQNALISMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALC 251

Query: 159 VMREMRFMDIR-PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--VAIATAL 215
             +EM    +  P+E    S+ S  + +   + G+ +H   ++      LG  V    +L
Sbjct: 252 YFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKF----GLGRDVFAGCSL 307

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
            DMY+KCG L+ A+ +F ++ +  +V+W  +I+G+    +  E +  F++M  + + P E
Sbjct: 308 CDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDE 367

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           IT+ SL+  C     L  G  +H YI + G +  + + N L+ MY KC E+R A   F+ 
Sbjct: 368 ITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEE 427

Query: 336 MK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
           M+ + D++ WNA+++A       ++ F L   M +S+ RP+ +T+  +L    E  ++E+
Sbjct: 428 MRCNADLVSWNAILTACMHHDQAEEVFGLLKLMCISQHRPDYITLTNVLGASAETVSIEI 487

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G  +H Y  K GL  D+ +   L+D+YAKCG +  A ++F   I  D+  W++++ GY  
Sbjct: 488 GNQVHCYALKTGLNCDISVTNGLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGYAQ 547

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
            G GEEAL  F  M R  VKPN +TF+G+L ACSH GLV EG  ++  M    G+VP  E
Sbjct: 548 FGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWQLYGTMEKEFGIVPTRE 607

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
           H  CMVDLL RAG L+EA   I  M   P+++VW  LLAA K
Sbjct: 608 HCSCMVDLLARAGCLNEAEAFIHQMAFDPDIVVWKTLLAACK 649



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 149/518 (28%), Positives = 255/518 (49%), Gaps = 11/518 (2%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFM-RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           N  +T+  K    + A+  + F+ +K G  +   T   ++ AC+ +     G++IH   +
Sbjct: 31  NEYITTLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDHML 90

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+    D  + N ++ MY +CGSL  A+ +FD MP R+VVSW+++I GY + G    ALE
Sbjct: 91  KSKSHPDLTLQNHILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALE 150

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI--ATALI 216
              +M    + P +    S++   + + D+ LG+ +HA V+++    + G  I    ALI
Sbjct: 151 FYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKS----EFGAHIIAQNALI 206

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF-PSE 275
            MY+K   +  A  +F+R+    ++SW  MI+G+ +     E +  F EM+ + V+ P+E
Sbjct: 207 SMYTKSNVIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNE 266

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
               S+   C  +   + G+ LH   ++ G    +    +L DMY KC  +  AR +F  
Sbjct: 267 FIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQ 326

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           +   D++ WNA+I+ +A      +A   F  M+   + P+E+T+  LL  CT    L  G
Sbjct: 327 IGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQG 386

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGM 454
             +H YI K GL++DV +   L+ MYAKC ++  A   F E     D+  WNA++     
Sbjct: 387 MQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMH 446

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           H   EE       M  S  +P+ IT   +L A +    +  G  V    +   GL   I 
Sbjct: 447 HDQAEEVFGLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALK-TGLNCDIS 505

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
               ++DL  + G L  A ++  S+ + P+++ W +L+
Sbjct: 506 VTNGLIDLYAKCGSLKTARKIFDSV-INPDVVSWSSLI 542



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 205/406 (50%), Gaps = 8/406 (1%)

Query: 158 EVMREMRFMDIRPSEVAMIS----MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           E ++   F+  +      +S    ++S  + +  ++ G+ IH  ++++     L   +  
Sbjct: 45  EAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDHMLKSKSHPDL--TLQN 102

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
            +++MY KCG+L  A+++F+ + + +VVSWT +I+GY +  +    +  + +M++  V P
Sbjct: 103 HILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMP 162

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
            + T  S+I  C  +G + LG+ LHA++L++ F   +   NAL+ MY K   I  A  +F
Sbjct: 163 DQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVF 222

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR-PNEVTMVGLLSLCTEAGAL 392
             M ++D++ W ++I+ ++Q     +A   F  M    V  PNE     + S C+     
Sbjct: 223 SRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQP 282

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           E G+ LH    K GL  DV    +L DMYAKCG ++ A  +F +    D+  WNA++AG+
Sbjct: 283 EYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGF 342

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
              G  +EA+ FF  M   G+ P+ IT   LL AC+    + +G  V    ++ +GL   
Sbjct: 343 AYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHG-YINKMGLDLD 401

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +     ++ +  +   L +A    + M    +++ W A+L A   H
Sbjct: 402 VPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHH 447



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/351 (25%), Positives = 173/351 (49%), Gaps = 14/351 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++  +        A+  ++ MR  G   D  T+ ++L AC      + G ++HG
Sbjct: 332 LVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQVHG 391

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMIRGYHRGGLPE 154
           +  K GLD D  V N L+ MY++C  L  A + F+EM  N D+VSW+ ++         E
Sbjct: 392 YINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWNAILTACMHHDQAE 451

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR---NCKDEKLGVAI 211
           E   +++ M     RP  + + +++   A+   +++G  +H   ++   NC      +++
Sbjct: 452 EVFGLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKTGLNCD-----ISV 506

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
              LID+Y+KCG+L  A+++F+ +    VVSW+ +I GY +     E ++LF  M   +V
Sbjct: 507 TNGLIDLYAKCGSLKTARKIFDSVINPDVVSWSSLILGYAQFGYGEEALKLFKTMRRLDV 566

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSAR 330
            P+ +T + ++  C  VG ++ G  L+  + +  G   +    + +VD+  +   +  A 
Sbjct: 567 KPNHVTFVGVLTACSHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLARAGCLNEAE 626

Query: 331 TLFDGMK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
                M    D+++W  +++A    H   +A     ++KV K +   +T+V
Sbjct: 627 AFIHQMAFDPDIVVWKTLLAACKSVH---QALARRTNLKVWKKQHEVITLV 674



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 158/305 (51%), Gaps = 12/305 (3%)

Query: 256 INEGVRLFAEMIEENVFPSEITILS-LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
            NE ++ F  + ++  F   ++  + LI  C ++  L+ G+ +H ++L++     L + N
Sbjct: 43  FNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGRKIHDHMLKSKSHPDLTLQN 102

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
            +++MYGKC  ++ A+ +FD M  ++V+ W +VI+ Y+Q      A E +  M  S V P
Sbjct: 103 HILNMYGKCGSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALEFYFQMLQSGVMP 162

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           ++ T   ++  C+  G + +G+ LH ++ K      +I + AL+ MY K   +  A  +F
Sbjct: 163 DQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYTKSNVIIDALDVF 222

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK-PNGITFIGLLNACSHAGLV 493
           S    RD+  W +M+AG+   G   EAL +F +M   GV  PN   F  + +ACS     
Sbjct: 223 SRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFGSVFSACS----- 277

Query: 494 TEGKSVFDKMVHGLGL---VPKIEHYGC-MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           +  +  + + +HG+ +   + +    GC + D+  + GLL  A  +   +  RP+++ W 
Sbjct: 278 SLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIG-RPDLVAWN 336

Query: 550 ALLAA 554
           A++A 
Sbjct: 337 AIIAG 341



 Score = 41.6 bits (96), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 72/147 (48%), Gaps = 8/147 (5%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINP-LTRYNSLVTSYIKNNKPSSALNIY 59
           + + NG ++L    +C +  +KT  K  + ++INP +  ++SL+  Y +      AL ++
Sbjct: 504 ISVTNGLIDL--YAKCGS--LKTARKI-FDSVINPDVVSWSSLILGYAQFGYGEEALKLF 558

Query: 60  AFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN-GLDGDAYVSNALIQMYSE 118
             MR+   + ++ T   +L AC+ V +   G +++G   K  G+       + ++ + + 
Sbjct: 559 KTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWQLYGTMEKEFGIVPTREHCSCMVDLLAR 618

Query: 119 CGSLVSARYLFDEMP-NRDVVSWSTMI 144
            G L  A     +M  + D+V W T++
Sbjct: 619 AGCLNEAEAFIHQMAFDPDIVVWKTLL 645


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 191/557 (34%), Positives = 301/557 (54%), Gaps = 14/557 (2%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           M ++G  V +     +L  C +       + +HG  +K G   D +V+ +L+ +Y  C S
Sbjct: 67  MLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCAS 126

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
              AR LFD MP+++VV+W+ +I G+     P  ALEV  EM  +   PS   +  M+S 
Sbjct: 127 SRDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSA 186

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
            +    +DLG+ +H   ++   D     ++  +L  +Y K G+L    + F      +V+
Sbjct: 187 CSAARRIDLGQQVHGYSIKYGADTI--TSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVI 244

Query: 242 SWTVMISGYIRC-NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           +WT MIS      N ++ G+ LF +M+E  V P+E T+ S++  CG    + LGK + A+
Sbjct: 245 TWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAF 304

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA------ 354
             + G E +L + N+ + +Y +  E   A  LF+ M S  ++ WNA+IS YAQ       
Sbjct: 305 CYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKD 364

Query: 355 --HCIDKAFE---LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
             H   + F+   LF  +  S+++P+  T   +LS+C+   ALE G+ +H    K G   
Sbjct: 365 DLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLS 424

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           DV++ +ALV+MY KCG +  A + F E   R    W +M++GY  HG  ++A+  F DM 
Sbjct: 425 DVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMV 484

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
            SG +PN ITF+ LL+ACS+AGLV E +  FD M +   + P ++HYGCMVD+  R G L
Sbjct: 485 LSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRL 544

Query: 530 DEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIY 589
           D+A   IK     PN  +W +L+A  + H N  +   AA ++LE++P+     VL+ N+Y
Sbjct: 545 DDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLLNMY 604

Query: 590 AVANRWNDVAGVRRVMK 606
               RW DVA VR++ K
Sbjct: 605 ISTGRWRDVARVRKLAK 621



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/516 (26%), Positives = 249/516 (48%), Gaps = 45/516 (8%)

Query: 10  LEQTRQCHAHIIKTHFK---FSYTNIINPLTR---------------------YNSLVTS 45
           L   R  H H++KT      F  T+++N   R                     + +L+T 
Sbjct: 92  LGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDKNVVTWTALITG 151

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
           +  N++P+ AL ++  M + G    ++T+  +L AC+      LG+++HG++IK G D  
Sbjct: 152 HTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHGYSIKYGADTI 211

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG-GLPEEALEVMREMR 164
             + N+L ++Y + G L S    F   P+++V++W+TMI          +  L +  +M 
Sbjct: 212 TSMGNSLCRLYCKSGDLESGLRAFKGTPDKNVITWTTMISSCAEDENYLDLGLSLFLDML 271

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIATALIDMYSKCG 223
              + P+E  + S++SL     D+ LGK + A C    C   +  + +  + + +Y + G
Sbjct: 272 EGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGC---EANLPVKNSTMYLYLRKG 328

Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-----------EGVRLFAEMIEENVF 272
               A +LF  ++ +S+++W  MISGY +  +             + ++LF +++   + 
Sbjct: 329 ETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQALKLFRDLVRSELK 388

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P   T  S++  C  +  L+ G+ +HA  ++ G    + + +ALV+MY KC  I  A   
Sbjct: 389 PDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKA 448

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F  M ++  + W ++IS Y+Q      A +LF  M +S  RPNE+T V LLS C+ AG +
Sbjct: 449 FVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFVSLLSACSYAGLV 508

Query: 393 EMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMA 450
           E   ++      +  +E  V     +VDM+ + G ++ A+       +  +  +W++++A
Sbjct: 509 EEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTGFEPNEAIWSSLVA 568

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGI-TFIGLLN 485
           G   HG  E  L F+       +KP  I T++ LLN
Sbjct: 569 GCRSHGNME--LAFYAADRLLELKPKVIETYVLLLN 602


>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
 gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
          Length = 572

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 174/453 (38%), Positives = 267/453 (58%), Gaps = 31/453 (6%)

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           + TAL+  Y+ CG +  A+++F+ +    VVSW VM+  Y +     E +  FA+M    
Sbjct: 107 VRTALVGAYAACGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSG 166

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC------- 323
           V   ++ + +++  CG +  L+ GK +H+Y+L +    +  +++AL+++Y  C       
Sbjct: 167 VLSDQLILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAE 226

Query: 324 ------------------------REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
                                   R+   AR +FDGM  KDV+ W+A+IS YA ++  ++
Sbjct: 227 KLYNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNE 286

Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVD 419
           A  LF  M+   +RP+EVTM+ ++S C   G+L+  KW+H +I+  GL   + +  AL+D
Sbjct: 287 ALSLFNDMQECGIRPDEVTMLSVISACANLGSLDKAKWIHAFIKNNGLNKILHICNALID 346

Query: 420 MYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGIT 479
           M+AKCG +N A  +F+E   +++  W +M+  + MHG G+ AL  F  M   GV+PN +T
Sbjct: 347 MFAKCGGINLALNIFNEMPQKNVITWTSMITAFAMHGDGKSALCLFEQMRNEGVEPNEVT 406

Query: 480 FIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM 539
           F+ LL AC HAGLV EG+S+F  MV   G+ PK EHYGCMVDLLGRA L+ EA  +I+SM
Sbjct: 407 FLNLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVNLIESM 466

Query: 540 PLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVA 599
            LRPN+ VWG+LLAA  +H +  +G  AA +IL+++P + G +VL+S IY  ++  ND  
Sbjct: 467 HLRPNVPVWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASVLLSKIYMKSDNLNDAQ 526

Query: 600 GVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
            VR VMK   V KE G S +++N   H+F  GG
Sbjct: 527 EVRDVMKLQGVSKETGLSWMDLNEPFHEFTAGG 559



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/462 (29%), Positives = 223/462 (48%), Gaps = 39/462 (8%)

Query: 30  TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNG-SEVDNFTIPTILKACAQVL-MT 87
           T  ++P   Y  L T       P   L   A +R+ G        +P +L++ A+ +   
Sbjct: 29  TTHLDPDRAY--LATIRAAATTPRLVLAACACLRRTGLPPPGPRALPALLRSAARCVGAG 86

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
              +  H  A + G   D +V  AL+  Y+ CG +  AR +FD M  RDVVSW  M+  Y
Sbjct: 87  AYVRGAHALAFRVGSLDDGFVRTALVGAYAACGCVGDARKVFDGMAVRDVVSWGVMLDSY 146

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
            +    +EAL    +M+   +   ++ + +++S    +  +  GK+IH+ ++    D  +
Sbjct: 147 CQTRNYKEALLQFAKMKNSGVLSDQLILATVLSACGHIRHLRTGKSIHSYML--VSDILI 204

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFN-------------------------------RLN 236
              +++ALI++Y+ C ++  A++L+N                                + 
Sbjct: 205 NAHLSSALINLYASCASMEMAEKLYNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMP 264

Query: 237 QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
           +  VVSW+ MISGY   N+ NE + LF +M E  + P E+T+LS+I  C  +G L   KW
Sbjct: 265 EKDVVSWSAMISGYADSNQPNEALSLFNDMQECGIRPDEVTMLSVISACANLGSLDKAKW 324

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           +HA+I  NG    L + NAL+DM+ KC  I  A  +F+ M  K+V+ W ++I+A+A    
Sbjct: 325 IHAFIKNNGLNKILHICNALIDMFAKCGGINLALNIFNEMPQKNVITWTSMITAFAMHGD 384

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVDVILKT 415
              A  LF  M+   V PNEVT + LL  C  AG +  G+ L + + +Q G+E       
Sbjct: 385 GKSALCLFEQMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYG 444

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHG 456
            +VD+  +   +  A  L      R ++ +W +++A   MHG
Sbjct: 445 CMVDLLGRAKLMQEAVNLIESMHLRPNVPVWGSLLAACWMHG 486



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 137/294 (46%), Gaps = 33/294 (11%)

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           HA   R G      +  ALV  Y  C  +  AR +FDGM  +DV+ W  ++ +Y Q    
Sbjct: 93  HALAFRVGSLDDGFVRTALVGAYAACGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNY 152

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
            +A   F  MK S V  +++ +  +LS C     L  GK +H+Y+    + ++  L +AL
Sbjct: 153 KEALLQFAKMKNSGVLSDQLILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSAL 212

Query: 418 VDMYAKCGDVNGAYRL------------------------FSEAIY-------RDICMWN 446
           +++YA C  +  A +L                        F  A Y       +D+  W+
Sbjct: 213 INLYASCASMEMAEKLYNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWS 272

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           AM++GY       EAL  F DM+  G++P+ +T + +++AC++ G + + K +    +  
Sbjct: 273 AMISGYADSNQPNEALSLFNDMQECGIRPDEVTMLSVISACANLGSLDKAKWIH-AFIKN 331

Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
            GL   +     ++D+  + G ++ A  +   MP + N+I W +++ A  +H +
Sbjct: 332 NGLNKILHICNALIDMFAKCGGINLALNIFNEMPQK-NVITWTSMITAFAMHGD 384


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  343 bits (879), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 189/547 (34%), Positives = 307/547 (56%), Gaps = 7/547 (1%)

Query: 90   GKEIHGFAIKNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
            G+E+H +  ++GL D    + NAL+ MY +C ++ +A  +F  MP++D VSW++MI G  
Sbjct: 474  GQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLD 533

Query: 149  RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
                 EEA+     M+   + PS  ++IS +S  + +  + LG+ IH    +   D  L 
Sbjct: 534  HNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLD--LD 591

Query: 209  VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN-EINEGVRLFAEMI 267
            V+++ AL+ +Y++  ++   +++F ++ +   VSW   I    +    + + ++ F EM+
Sbjct: 592  VSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMM 651

Query: 268  EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
            +    P+ +T ++++        L LG  +HA IL+       A+ NAL+  YGKC ++ 
Sbjct: 652  QAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQME 711

Query: 328  SARTLFDGM-KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
                +F  M + +D + WN++IS Y  +  + KA +L   M     + +  T   +LS C
Sbjct: 712  DCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSAC 771

Query: 387  TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
                 LE G  +H    +  LE DV++ +ALVDMYAKCG ++ A R F     R+I  WN
Sbjct: 772  ASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWN 831

Query: 447  AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
            +M++GY  HG G++AL  F  M++ G  P+ +TF+G+L+ACSH GLV EG   F  M   
Sbjct: 832  SMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEV 891

Query: 507  LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA--SKLHKNPSMG 564
             GL P+IEH+ CMVDLLGRAG + +  + IK+MP+ PN+++W  +L A      +N  +G
Sbjct: 892  YGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELG 951

Query: 565  EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
            + AA  ++E+EPQN    VL+SN++A    W DV   R  M++  VKK+ G S V +   
Sbjct: 952  QRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDG 1011

Query: 625  VHKFIRG 631
            VH F+ G
Sbjct: 1012 VHLFVAG 1018



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 146/536 (27%), Positives = 276/536 (51%), Gaps = 23/536 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT--HLGKEI 93
           L  ++ L++ Y +N  P  A +++  +  +G   ++F + + L+AC Q   T   LG +I
Sbjct: 206 LVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQI 265

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSEC-GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           H F  K     D  +SN L+ MYS+C GS+  A  +FDE+  R+ V+W+++I  Y R G 
Sbjct: 266 HAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGD 325

Query: 153 PEEALEVMREMRF----MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL- 207
              A ++   M+     +++RP+E  + S+V+    +AD  L   +   + R  K   L 
Sbjct: 326 AVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGL-VLLEQMLTRIEKSGFLR 384

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            + + +AL++ +++ G +  AK +F ++   + V+   ++ G  R ++  E  ++F EM 
Sbjct: 385 DLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMK 444

Query: 268 EENVFPSE--ITILSLIIE-CGFVGGLQLGKWLHAYILRNGF-EFSLAMANALVDMYGKC 323
           +     SE  + +LS   E      G + G+ +HAY+ R+G  +  +++ NALV+MYGKC
Sbjct: 445 DLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKC 504

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
             I +A ++F  M SKD + WN++IS        ++A   F  MK + + P+  +++  L
Sbjct: 505 TAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTL 564

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
           S C+  G L +G+ +H    K GL++DV +  AL+ +YA+   +N   ++F +    D  
Sbjct: 565 SSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQV 624

Query: 444 MWNAMMAGYGMHGCGE-EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
            WN+ +     +     +AL +F++M ++G +PN +TFI +L A S   ++  G      
Sbjct: 625 SWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQ---- 680

Query: 503 MVHGLGLVPKIEHYGCMVDLL----GRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
            +H L L   +     + + L    G+   +++   +   M  R + + W ++++ 
Sbjct: 681 -IHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISG 735



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 211/398 (53%), Gaps = 17/398 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++    N +   A++ +  M++NG    NF++ + L +C+ +    LG++IHG   
Sbjct: 525 WNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGF 584

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE---- 154
           K GLD D  VSNAL+ +Y+E  S+   + +F +MP  D VSW++ I     G L +    
Sbjct: 585 KWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFI-----GALAKYEAS 639

Query: 155 --EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAI 211
             +AL+   EM     RP+ V  I++++  +  + + LG  IHA +++ +  D+    AI
Sbjct: 640 VLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDN---AI 696

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQ-NSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
             AL+  Y KC  +   + +F+R+++    VSW  MISGY+    +++ + L   M++  
Sbjct: 697 ENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRG 756

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
                 T  +++  C  V  L+ G  +HA  +R   E  + + +ALVDMY KC +I  A 
Sbjct: 757 QKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYAS 816

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
             F+ M  +++  WN++IS YA+     KA ++F  MK     P+ VT VG+LS C+  G
Sbjct: 817 RFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVG 876

Query: 391 ALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
            ++ G K   +  E  GL   +   + +VD+  + GDV
Sbjct: 877 LVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDV 914



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 147/530 (27%), Positives = 259/530 (48%), Gaps = 42/530 (7%)

Query: 48  KNNKPSSALNIYAF----MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD 103
           K N   + L  Y F    +++  SE D +   + L         +    +H    K G  
Sbjct: 122 KYNSTYTFLRHYTFSHSQLQQLDSEFDRYKTSSSL---------YDANHLHLQLYKTGFT 172

Query: 104 GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
            D +  N LI +Y   G+LVSAR LFDEMP +++VSWS +I GY +  +P+EA  + + +
Sbjct: 173 DDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGV 232

Query: 164 RFMDIRPSEVAMISMVSLFADVAD--VDLGKAIHACVVR-NCKDEKLGVAIATALIDMYS 220
               + P+  A+ S +          + LG  IHA + +  C  + +   ++  L+ MYS
Sbjct: 233 ISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMI---LSNVLMSMYS 289

Query: 221 KC-GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM----IEENVFPSE 275
            C G++  A ++F+ +   + V+W  +IS Y R  +     +LF+ M    +E N+ P+E
Sbjct: 290 DCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNE 349

Query: 276 ITILSLII-ECGFVG-GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
            T+ SL+   C     GL L + +   I ++GF   L + +ALV+ + +   +  A+ +F
Sbjct: 350 YTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIF 409

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
             M  ++ +  N ++   A+ H  ++A ++F  MK   V  N  ++V LLS  TE   L+
Sbjct: 410 KQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMK-DLVEINSESLVVLLSTFTEFSNLK 468

Query: 394 MGKW----LHTYIEKQGL-EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
            GK     +H Y+ + GL +  + +  ALV+MY KC  ++ A  +F     +D   WN+M
Sbjct: 469 EGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSM 528

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG-- 506
           ++G   +   EEA+  F  M+R+G+ P+  + I  L++CS  G +T G+      +HG  
Sbjct: 529 ISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQ-----IHGEG 583

Query: 507 --LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
              GL   +     ++ L      ++E  ++   MP   + + W + + A
Sbjct: 584 FKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMP-EYDQVSWNSFIGA 632


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  342 bits (878), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 212/636 (33%), Positives = 335/636 (52%), Gaps = 62/636 (9%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMR----------------KNGSEVDN------------ 71
           NSL+T Y +    +SA N++  MR                +NG+E ++            
Sbjct: 88  NSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERESLLLIGEMLESGL 147

Query: 72  ----FTIPTILKAC-AQVLMTHLGKEIHGFAIKNGLDG-DAYVSNALIQMYSECGSLVSA 125
               +T+  +  AC    L   +G  + G   K GL G D  V +ALI M +  G L SA
Sbjct: 148 LPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMGLWGTDIAVGSALIDMLARNGDLASA 207

Query: 126 RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV 185
           R +FD +  + VV W+ +I  Y +G   EEA+E+  +       P    M SM+S   ++
Sbjct: 208 RKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTEL 267

Query: 186 ADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCG---NLAYAKQLFNRLNQN 238
             V LG  +H+  +R      +G A    ++  L+DMY+K      + YA ++F R+ +N
Sbjct: 268 GSVRLGLQLHSLALR------MGFASDACVSCGLVDMYAKSNIEQAMDYANKVFERMRKN 321

Query: 239 SVVSWTVMISGYIRCN-EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
            V+SWT +ISGY++   + N+ + LF EM+ E++ P+ IT  S++  C  +     G+ +
Sbjct: 322 DVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSILKACANISDHDSGRQV 381

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           HA+++++    +  + NALV MY +   +  AR +F+ +  + ++             CI
Sbjct: 382 HAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSMI------------SCI 429

Query: 358 DKAFELFIHMKVSKVRP--NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
            +  +  +  ++ ++    +  T   L+S     G L  G+ LH    K G   D  +  
Sbjct: 430 TEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAMTLKAGFGSDRFVSN 489

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           +LV MY++CG +  A R F+E   R++  W +M++G   HG  E AL  F DM  +GVKP
Sbjct: 490 SLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKP 549

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEM 535
           N +T+I +L+ACSH GLV EGK  F  M    GL+P++EHY CMVDLL R+GL+ EA E 
Sbjct: 550 NDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGLVKEALEF 609

Query: 536 IKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRW 595
           I  MPL+ + +VW  LL A + H N  +GEIAA  ++E+EP++    VL+SN+YA A  W
Sbjct: 610 INEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAPYVLLSNLYADAGLW 669

Query: 596 NDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           ++VA +R  M++  + KE G S +EV    H+F  G
Sbjct: 670 DEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAG 705



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 235/494 (47%), Gaps = 54/494 (10%)

Query: 89  LGKEIHGFAIKNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPN-RDVVSWSTMIRG 146
           LG+ +H   ++  L D DA V+N+L+ +YS CG++ SAR +FD M   RD+VSW+ M   
Sbjct: 66  LGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASC 125

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC---- 202
             R G   E+L ++ EM    + P+   + ++                HAC         
Sbjct: 126 LARNGAERESLLLIGEMLESGLLPNAYTLCAVA---------------HACFPHELYCLV 170

Query: 203 ------KDEKLG-----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
                    K+G     +A+ +ALIDM ++ G+LA A+++F+ L + +VV WT++IS Y+
Sbjct: 171 GGVVLGLVHKMGLWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYV 230

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +     E V +F + +E+   P   T+ S+I  C  +G ++LG  LH+  LR GF     
Sbjct: 231 QGECAEEAVEIFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDAC 290

Query: 312 MANALVDMYGKC---REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID-KAFELFIHM 367
           ++  LVDMY K    + +  A  +F+ M+  DV+ W A+IS Y Q+   + K   LF  M
Sbjct: 291 VSCGLVDMYAKSNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEM 350

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
               ++PN +T   +L  C      + G+ +H ++ K        +  ALV MYA+ G +
Sbjct: 351 LNESIKPNHITYSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCM 410

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI---TFIGLL 484
             A R+F++   R             M  C  E     +D  R G    GI   TF  L+
Sbjct: 411 EEARRVFNQLYER------------SMISCITEGRDAPLD-HRIGRMDMGISSSTFASLI 457

Query: 485 NACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
           +A +  G++T+G+ +   M    G          +V +  R G L++A      +  R N
Sbjct: 458 SAAASVGMLTKGQQLH-AMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDR-N 515

Query: 545 MIVWGALLAASKLH 558
           +I W ++++    H
Sbjct: 516 VISWTSMISGLAKH 529


>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
          Length = 735

 Score =  342 bits (878), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 200/610 (32%), Positives = 329/610 (53%), Gaps = 22/610 (3%)

Query: 28  SYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN-FTIPTILKACAQVLM 86
           S+ +++NPL+R+           +P  AL+ +  M  + + + +  +      A A+   
Sbjct: 84  SWNSLLNPLSRH-----------RPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAAS 132

Query: 87  THLGKEIHGFAIK-NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIR 145
              G   H  A K      + YV  +L+ MY + G +  AR +FD MP R+  SWSTM+ 
Sbjct: 133 APAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVA 192

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA---DVDLGKAIHACVVRNC 202
           GY      EEA ++ R M  ++  PSE +     ++ + V+    + +G+ +H  +V   
Sbjct: 193 GYAAEKCSEEAFDLFRLM--LEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIV--- 247

Query: 203 KDEKLG-VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVR 261
           KD  L  V++  +L+ MY+K G +  A  +F    + + ++W+ MI+GY +  E +  V 
Sbjct: 248 KDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVS 307

Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           +F++M      P+E T + ++     +G L +GK  H  +++ GFE  + + +ALVDMY 
Sbjct: 308 MFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYA 367

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           KC  I  A+  FD +   D+++W A++S + Q    ++A  L+  M    + P++ T+  
Sbjct: 368 KCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIAS 427

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
            L  C    ALE GK LHT I K GL +   + +AL  MY+KCG++     +F     RD
Sbjct: 428 GLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRD 487

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           +  WN++++G+  +GCG  AL  F +M+  G  P+ ITFI +L ACSH GLV  G   F 
Sbjct: 488 VIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFS 547

Query: 502 KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
            M    GL P+++HY CMVD+L RAG+L EA + I+S+ +     +W  +L A +  ++ 
Sbjct: 548 LMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDF 607

Query: 562 SMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
            +G  A  +++E+  ++    +L+SNIYA   +WNDV  VR +M+   V K+PG S VE+
Sbjct: 608 DVGAYAGERLMELGTRDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVEL 667

Query: 622 NGLVHKFIRG 631
           N  VH F+ G
Sbjct: 668 NSRVHVFVVG 677



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 252/473 (53%), Gaps = 16/473 (3%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGS--LVSARYLFDEMPN--RDVVSWSTMIR 145
           G+ +H +A+K+G    A V+N+LI  YS      L +A  +FD++P   RDV SW++++ 
Sbjct: 31  GEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSLLN 90

Query: 146 GYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
              R   P +AL   R M     + PS  +  +  +  A  A    G A HA   +    
Sbjct: 91  PLSR-HRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACK-IPS 148

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI--RCNEINEGVRL 262
               V + T+L++MY K G ++ A+++F+ + Q +  SW+ M++GY   +C+E  E   L
Sbjct: 149 AVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKCSE--EAFDL 206

Query: 263 FAEMIEE-NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           F  M+EE     SE    +++       GL +G+ +H  I+++G    +++ N+LV MY 
Sbjct: 207 FRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYA 266

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           K   + +A  +F+  + ++ + W+A+I+ YAQ    D A  +F  M  +   P E T VG
Sbjct: 267 KAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVG 326

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           +L+  ++ GAL +GK  H  + K G EV + +K+ALVDMYAKCG +  A   F +    D
Sbjct: 327 VLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVD 386

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           I +W AM++G+  +G  EEAL  +  M++ G+ P+  T    L AC+    +  GK +  
Sbjct: 387 IVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHT 446

Query: 502 KMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           ++V +GLGL   +     +  +  + G L++   + + +P R ++I W ++++
Sbjct: 447 QIVKYGLGLGAPVG--SALSTMYSKCGNLEDGMSVFRRIPDR-DVIAWNSIIS 496


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 214/634 (33%), Positives = 321/634 (50%), Gaps = 55/634 (8%)

Query: 26  KFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVL 85
           KF   +I+     +N  ++S+++N    SAL ++  M +  S   N  I   L+     L
Sbjct: 40  KFKDPDIVT----WNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSL 95

Query: 86  MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIR 145
              L  ++         + D +  N ++  Y     L  A  LFD MP +DVVSW+ M+ 
Sbjct: 96  ARDLFDKMP--------ERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLS 147

Query: 146 GYHRGGLPEEALEV------------------------MREMRFMDIRPSEVAMISMVSL 181
           GY + G  +EA EV                        ++E R +    S   +IS   L
Sbjct: 148 GYAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCL 207

Query: 182 FADVADVD-LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
                  + LG A         +D    V     +I  Y++ G+L+ AK+LFN      V
Sbjct: 208 MGGYVKRNMLGDARQLFDRMPVRD----VISWNTMISGYAQVGDLSQAKRLFNESPIRDV 263

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL---GKWL 297
            +WT M+SGY++   ++E  + F EM  +N    EI+  +++   G+V   ++   G+  
Sbjct: 264 FTWTAMVSGYVQNGMVDEARKYFDEMPVKN----EISYNAML--AGYVQYKKMVIAGELF 317

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
            A   RN     ++  N ++  YG+   I  AR LFD M  +D + W A+IS YAQ    
Sbjct: 318 EAMPCRN-----ISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHY 372

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
           ++A  +F+ MK      N  T    LS C +  ALE+GK +H  + K G E    +  AL
Sbjct: 373 EEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNAL 432

Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
           + MY KCG  + A  +F     +D+  WN M+AGY  HG G +AL+ F  M+++GVKP+ 
Sbjct: 433 LGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDE 492

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK 537
           IT +G+L+ACSH+GL+  G   F  M     + P  +HY CM+DLLGRAG L+EA  +++
Sbjct: 493 ITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMR 552

Query: 538 SMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWND 597
           +MP  P    WGALL AS++H N  +GE AA  + ++EPQN G  VL+SN+YA + RW D
Sbjct: 553 NMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVD 612

Query: 598 VAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           V  +R  M+E  V+K  G+S VEV   +H F  G
Sbjct: 613 VGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVG 646


>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 753

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 196/618 (31%), Positives = 330/618 (53%), Gaps = 25/618 (4%)

Query: 31  NIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           NII+    +NSL++ Y +      A+ ++   R +  ++D FT    L  C +      G
Sbjct: 113 NIIS----FNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLDFG 168

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           K +HG  + NGL    ++ N LI MYS+CG L  A  LFD    RD VSW+++I GY R 
Sbjct: 169 KLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVRV 228

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVS---LFADVADVDLGKAIHACVVRNCKDEKL 207
           G  EE L ++ +M    ++ +  A+ S++    +  +   ++ G AIH      C   KL
Sbjct: 229 GAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAIH------CYAAKL 282

Query: 208 G----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI-----NE 258
           G    + + TAL+DMY+K G+L  A +LF+ +   +VV++  MISG+++ ++I     +E
Sbjct: 283 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSE 342

Query: 259 GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
             +LF EM    + PS  T   ++  C     L+ G+ +HA I +N F+    + +AL++
Sbjct: 343 AFKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIE 402

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
           +Y            F     +D+  W ++I  + Q   ++ AF+LF  +  S +RP E T
Sbjct: 403 LYALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYT 462

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
           +  ++S C +  AL  G+ +  Y  K G++    +KT+ + MYAK G++  A ++F E  
Sbjct: 463 VSLMMSACADFAALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQ 522

Query: 439 YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKS 498
             D+  ++AM++    HG   +AL  F  M+  G+KPN   F+G+L AC H GLVT G +
Sbjct: 523 NPDVATYSAMISSLAQHGSAHDALNIFESMKTRGIKPNQQAFLGVLIACCHGGLVTHGVN 582

Query: 499 VFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            F  M +  G+ P  +H+ C+ DLLGR G L +A  +I S   + + ++W ALL++ +++
Sbjct: 583 YFQTMKNSYGINPNEKHFTCLADLLGRTGRLSDAENLILSSGFQDHPVMWRALLSSCRVY 642

Query: 559 KNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSS 618
           K+  +G+  A +++E+EP+  G  VL+ NIY  +   +    VR +M++  VKKEP  S 
Sbjct: 643 KDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSW 702

Query: 619 VEVNGLVHKFIRGGMVNW 636
           + +    H F    + +W
Sbjct: 703 IVLGNQTHSF---AVADW 717



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/482 (28%), Positives = 246/482 (51%), Gaps = 20/482 (4%)

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           LGK  HG  +K+ L+   Y+ N L+ MY +C  L  AR LFD MP R+++S++++I GY 
Sbjct: 66  LGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 125

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           + G  E+A+E+  E R  +++  +      +    +  D+D GK +H  VV N   ++  
Sbjct: 126 QVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLDFGKLLHGLVVVNGLSQQ-- 183

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V +   LIDMYSKCG L  A  LF+R N+   VSW  +ISGY+R     E + L A+M  
Sbjct: 184 VFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVRVGAAEEPLNLLAKMHR 243

Query: 269 ENVFPSEITILSLIIECGF---VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
             +  +   + S++  C      G ++ G  +H Y  + G EF + +  AL+DMY K   
Sbjct: 244 AGLKLTTYALGSVLKACCINLNEGLMEKGMAIHCYAAKLGMEFDIVVRTALLDMYAKNGS 303

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCI-----DKAFELFIHMKVSKVRPNEVTMV 380
           ++ A  LF  M +K+V+ +NA+IS + Q   I      +AF+LF+ M+   + P+  T  
Sbjct: 304 LKEAIKLFSLMPAKNVVTYNAMISGFLQMDDITDEASSEAFKLFMEMQRRGLEPSPSTFS 363

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
            +L  C+ A  LE G+ +H  I K   + D  + +AL+++YA  G      + F+    +
Sbjct: 364 VVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQ 423

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           DI  W +++  +  +   E A   F  +  S ++P   T   +++AC+    ++ G+   
Sbjct: 424 DIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFAALSSGEQ-- 481

Query: 501 DKMVHGLGLVPKIEHYGCM----VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
              + G  +   I+ Y  +    + +  ++G +  A+++   +   P++  + A++++  
Sbjct: 482 ---IQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQ-NPDVATYSAMISSLA 537

Query: 557 LH 558
            H
Sbjct: 538 QH 539



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 164/329 (49%), Gaps = 14/329 (4%)

Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE-ENVFPSEITILSLIIECGF 287
           K  FN + Q S+V   ++I+      ++  G R  + + + +N          L      
Sbjct: 9   KTSFNNIAQESLV---ILIT-----KQVGLGYRFLSSLCQPKNTALDSEAYKKLFQTAAK 60

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
            G L LGK  H +++++     L + N L++MY KCRE+  AR LFD M  ++++ +N++
Sbjct: 61  SGSLVLGKLAHGHMVKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSL 120

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           IS Y Q    ++A ELF+  +   ++ ++ T  G L  C E   L+ GK LH  +   GL
Sbjct: 121 ISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCGERCDLDFGKLLHGLVVVNGL 180

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
              V L   L+DMY+KCG ++ A  LF     RD   WN++++GY   G  EE L     
Sbjct: 181 SQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNSLISGYVRVGAAEEPLNLLAK 240

Query: 468 MERSGVKPNGITFIGLLNACS---HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLG 524
           M R+G+K        +L AC    + GL+ +G ++       LG+   I     ++D+  
Sbjct: 241 MHRAGLKLTTYALGSVLKACCINLNEGLMEKGMAI-HCYAAKLGMEFDIVVRTALLDMYA 299

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           + G L EA ++   MP + N++ + A+++
Sbjct: 300 KNGSLKEAIKLFSLMPAK-NVVTYNAMIS 327


>gi|255586014|ref|XP_002533676.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526427|gb|EEF28706.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 726

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 208/618 (33%), Positives = 342/618 (55%), Gaps = 19/618 (3%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC----A 82
           FS     N L+ +N ++ +++     + AL +Y  MR++G + D FT PTI +A     +
Sbjct: 85  FSLLQEPNTLS-WNLIMRTHLDFGLVTEALLLYKKMRESGVKTDAFTFPTINRAVMSLKS 143

Query: 83  QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
            VL   LGK +H  A+K G   D Y  N +I++Y+ CG +   R +FDEM  RD+VSW++
Sbjct: 144 DVL---LGKMVHCDAMKLGFGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTS 200

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           MI GY   G    A E+  +MR +++ P+ V +I M+       +   G+ +H  +++N 
Sbjct: 201 MISGYVSEGNVFSAFELFNKMR-LEMEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKN- 258

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
               +  ++  +++ MYS  G+    + LF  + +  V+SW  +I  Y    +  E V  
Sbjct: 259 -GLLIYGSVQNSILRMYSITGSAKEVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCG 317

Query: 263 FAEMIEENVFPSEITILSLIIEC-GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           F +M  E    SE   L+L+I     +G L  G+ LH++ ++ G    + +A +L+D Y 
Sbjct: 318 FNQMRGEVALSSET--LTLVISVFAKIGNLVEGEKLHSFSIKVGLCDDVLLA-SLLDFYA 374

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           KC E+R++  LF  +  +    W  ++S   Q    D+A  LF  M+ S V+     +  
Sbjct: 375 KCGELRNSVQLFGEIPCRSSSTWKLMMSGCIQNGYFDEAIHLFRQMQASGVQLQAQILGS 434

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQG---LEVDVI-LKTALVDMYAKCGDVNGAYRLFSEA 437
           L+  C+  G+L++ K +H Y+ +     LE D I L T++++MY +CG ++ A   F+  
Sbjct: 435 LVDACSHLGSLQLCKEIHGYLTRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRM 494

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
           + +D   W +M+ GYG+HG   EAL  F  M    V PN +TF+ LL+ACSH+GL+ +G 
Sbjct: 495 VAKDNITWTSMIEGYGIHGMAIEALKLFNQMLVERVLPNRVTFLSLLSACSHSGLIRQGC 554

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
            +F  M    G+ P ++HY CMVDLLGR G + EA  MI  M +  +  +WGAL+A+ ++
Sbjct: 555 ELFLSMKWVFGMEPDLDHYTCMVDLLGRCGKIKEALAMIIRMVVVADSRIWGALVASCRV 614

Query: 558 HKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
           H +  +GE AA ++LE+E  N GY  L+SNI A+  +W++V  VR+V+ E  ++K PG+S
Sbjct: 615 HGDKKVGEFAAQRLLEMESDNVGYYTLLSNIQAMVGKWDEVEQVRKVIHEKDLRKTPGWS 674

Query: 618 SVEVNGLVHKFIRGGMVN 635
            +   G  + FI  G+ +
Sbjct: 675 CIVGKGRNYCFISEGLSD 692



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 237/478 (49%), Gaps = 20/478 (4%)

Query: 91  KEIHG-FAIKNGLDGD-AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           K+IH    +  G +   ++ S  LI  YS+   L SA  +F  +   + +SW+ ++R + 
Sbjct: 45  KQIHASLLVSTGFNESISFPSTKLISFYSKFNDLESAISVFSLLQEPNTLSWNLIMRTHL 104

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISM-VSLFADVADVDLGKAIHACVVRNCKDEKL 207
             GL  EAL + ++MR   ++       ++  ++ +  +DV LGK +H      C   KL
Sbjct: 105 DFGLVTEALLLYKKMRESGVKTDAFTFPTINRAVMSLKSDVLLGKMVH------CDAMKL 158

Query: 208 GVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
           G          +I++Y++CG + Y + +F+ ++   +VSWT MISGY+    +     LF
Sbjct: 159 GFGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSAFELF 218

Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
            +M  E + P+ +T++ ++  C        G+ LH YI++NG     ++ N+++ MY   
Sbjct: 219 NKMRLE-MEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYSIT 277

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
              +   +LF  +  +DV+ WN +I  YA     ++    F  M+  +V  +  T+  ++
Sbjct: 278 GSAKEVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQMR-GEVALSSETLTLVI 336

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
           S+  + G L  G+ LH++  K GL  DV+L  +L+D YAKCG++  + +LF E   R   
Sbjct: 337 SVFAKIGNLVEGEKLHSFSIKVGLCDDVLL-ASLLDFYAKCGELRNSVQLFGEIPCRSSS 395

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            W  MM+G   +G  +EA+  F  M+ SGV+        L++ACSH G +   K +   +
Sbjct: 396 TWKLMMSGCIQNGYFDEAIHLFRQMQASGVQLQAQILGSLVDACSHLGSLQLCKEIHGYL 455

Query: 504 VHGLGLVPKIE--HYGC-MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
                 + + +  H G  ++++  R G +  A E    M  + N I W +++    +H
Sbjct: 456 TRNFFYILEGDNIHLGTSILNMYIRCGSISSAREYFNRMVAKDN-ITWTSMIEGYGIH 512



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 171/359 (47%), Gaps = 5/359 (1%)

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
           D+   K IHA ++ +    +     +T LI  YSK  +L  A  +F+ L + + +SW ++
Sbjct: 40  DLRTLKQIHASLLVSTGFNESISFPSTKLISFYSKFNDLESAISVFSLLQEPNTLSWNLI 99

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC-GFVGGLQLGKWLHAYILRNG 305
           +  ++    + E + L+ +M E  V     T  ++          + LGK +H   ++ G
Sbjct: 100 MRTHLDFGLVTEALLLYKKMRESGVKTDAFTFPTINRAVMSLKSDVLLGKMVHCDAMKLG 159

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
           F + L   N ++++Y +C  +   R +FD M  +D++ W ++IS Y     +  AFELF 
Sbjct: 160 FGYDLYFCNTMIEVYARCGCVYYGRVMFDEMSPRDLVSWTSMISGYVSEGNVFSAFELFN 219

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            M++ ++ PN VT++ +L  C        G+ LH YI K GL +   ++ +++ MY+  G
Sbjct: 220 KMRL-EMEPNSVTLIVMLKGCYAYDNFSEGRQLHCYIIKNGLLIYGSVQNSILRMYSITG 278

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
                  LF E   RD+  WN ++  Y + G  EE +  F  M R  V  +  T   +++
Sbjct: 279 SAKEVESLFVEIYRRDVISWNTLIGFYALRGDAEEMVCGFNQM-RGEVALSSETLTLVIS 337

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
             +  G + EG+ +    +  +GL   +     ++D   + G L  + ++   +P R +
Sbjct: 338 VFAKIGNLVEGEKLHSFSIK-VGLCDDVL-LASLLDFYAKCGELRNSVQLFGEIPCRSS 394



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 10/184 (5%)

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
           T L+  Y+K  D+  A  +FS     +   WN +M  +   G   EAL+ +  M  SGVK
Sbjct: 66  TKLISFYSKFNDLESAISVFSLLQEPNTLSWNLIMRTHLDFGLVTEALLLYKKMRESGVK 125

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVH----GLGLVPKIEHYGCMVDLLGRAGLLD 530
            +  TF  +    + A +  +   +  KMVH     LG    +     M+++  R G + 
Sbjct: 126 TDAFTFPTI----NRAVMSLKSDVLLGKMVHCDAMKLGFGYDLYFCNTMIEVYARCGCVY 181

Query: 531 EAHEMIKSMPLRPNMIVWGALLAASKLHKNP-SMGEIAATQILEIEPQNYGYNVLMSNIY 589
               M   M  R +++ W ++++      N  S  E+     LE+EP +    V++   Y
Sbjct: 182 YGRVMFDEMSPR-DLVSWTSMISGYVSEGNVFSAFELFNKMRLEMEPNSVTLIVMLKGCY 240

Query: 590 AVAN 593
           A  N
Sbjct: 241 AYDN 244


>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
          Length = 601

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 174/503 (34%), Positives = 290/503 (57%), Gaps = 4/503 (0%)

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           LFD +    +  W+T+IRG+     P+  L     +R   + P       ++  F+ + +
Sbjct: 60  LFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN 119

Query: 188 VDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMI 247
            +  +  +A +V+   D      +  +L+  ++ CG +  +++LF    +  VVSWT +I
Sbjct: 120 ENPFQ-FYAHIVKFGLD--FDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALI 176

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG-F 306
           +G +R     E +  F EM    V   E+TI+S++     +  +  G+W+H + + +G  
Sbjct: 177 NGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRV 236

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
            + + + +ALVDMY KC     A  +F+ M +++++ W A+I+ Y Q +   +A ++F  
Sbjct: 237 IWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQE 296

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           M +  + PN+ T+   L+ C + G+L+ G+WLH Y+++  L ++  L TALVDMY+KCG 
Sbjct: 297 MIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGC 356

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           V+ A  +F +   +D+  W AM+ G  M G    +L  F  M RS V+PNG+TF+G+L+A
Sbjct: 357 VDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSA 416

Query: 487 CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
           C+H GLV EG  +F  M+    L P ++HYGCMVDLLGRAG L+EA + I+SMP+ P   
Sbjct: 417 CAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPG 476

Query: 547 VWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMK 606
           VWGAL +   +HK   +GE     +++++P + G  +L++N+Y+   +W   A VRR+MK
Sbjct: 477 VWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMK 536

Query: 607 EIRVKKEPGFSSVEVNGLVHKFI 629
              V K PG S +EVNG++H+FI
Sbjct: 537 GKGVDKSPGCSWIEVNGVIHEFI 559



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/419 (32%), Positives = 226/419 (53%), Gaps = 4/419 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  +  +++P   L  Y+ +R +G   D  T P +LKA ++ L      + +   +
Sbjct: 72  WNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSK-LRNENPFQFYAHIV 130

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GLD DA+V N+L+  ++ CG +  +R LF E   +DVVSW+ +I G  R G   EALE
Sbjct: 131 KFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALE 190

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
              EMR   +   EV ++S++   A + DV  G+ +H   V + +     V + +AL+DM
Sbjct: 191 CFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGR-VIWDVYVGSALVDM 249

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSKCG    A ++FN +   ++VSW  +I+GY++CN   E +++F EMI E + P++ T+
Sbjct: 250 YSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTV 309

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S +  C  +G L  G+WLH Y+ R+    +  +  ALVDMY KC  +  A  +F+ + +
Sbjct: 310 TSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPA 369

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KW 397
           KDV  W A+I+  A       +  LF  M  S+V+PN VT +G+LS C   G ++ G + 
Sbjct: 370 KDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLEL 429

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMH 455
               I    LE +V     +VD+  + G +  A +   S  +     +W A+ +G  +H
Sbjct: 430 FRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIH 488



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 170/337 (50%), Gaps = 6/337 (1%)

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           + S   +L Y   LF+RL    +  W  +I G+   ++    +  ++ +    V P   T
Sbjct: 47  LRSATKDLGYTLLLFDRLATPYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHT 106

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
              L+     +      ++ +A+I++ G +F   + N+LV  +  C  +  +R LF    
Sbjct: 107 FPLLLKAFSKLRNENPFQF-YAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLFIETA 165

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KDV+ W A+I+   +     +A E F+ M+ S V  +EVT+V +L        +  G+W
Sbjct: 166 KKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAAAMLRDVWFGRW 225

Query: 398 LHT-YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
           +H  Y+E   +  DV + +ALVDMY+KCG  + A ++F+E   R++  W A++AGY    
Sbjct: 226 VHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTRNLVSWGALIAGYVQCN 285

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG-LGLVPKIEH 515
             +EAL  F +M   G++PN  T    L AC+  G + +G+ + + +    LGL  K+  
Sbjct: 286 RYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLG- 344

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
              +VD+  + G +DEA  + + +P + ++  W A++
Sbjct: 345 -TALVDMYSKCGCVDEALLVFEKLPAK-DVYPWTAMI 379



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 103/215 (47%), Gaps = 2/215 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  + +L+  Y++ N+   AL ++  M   G E +  T+ + L ACAQ+     G+ +H 
Sbjct: 271 LVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHE 330

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +  ++ L  ++ +  AL+ MYS+CG +  A  +F+++P +DV  W+ MI G    G    
Sbjct: 331 YVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALS 390

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           +L +  +M    ++P+ V  + ++S  A    VD G  +   ++ + + E   V     +
Sbjct: 391 SLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEP-NVDHYGCM 449

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVS-WTVMISG 249
           +D+  + G L  A +    +        W  + SG
Sbjct: 450 VDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSG 484


>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g25970-like [Cucumis
           sativus]
          Length = 704

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 192/594 (32%), Positives = 318/594 (53%), Gaps = 5/594 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  +I      ++ ++   MR  G E+D +T  ++LK  A   M HLG+++H   I
Sbjct: 67  WNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIII 126

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   + Y  +AL+ MY++C  L  A   F  +   + VSW+ MI GY + G  E A  
Sbjct: 127 KMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFW 186

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           ++  M     +  +     ++ L  D    +L   +H  ++++    +L   +  ALI  
Sbjct: 187 LLDCMEQEGEKVDDGTYAPLLPLLDDADFCNLTSQLHGKIIKH--GLELVNTMCNALITS 244

Query: 219 YSKCGNLAYAKQLFNR-LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           YSKCG+L  AK++F+       +V+W  +++ Y+  ++ +   +L  +M E    P   +
Sbjct: 245 YSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYS 304

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR--EIRSARTLFDG 335
             S+I  C        G+ LH  +++ GFE S+ ++NAL+ MY K     ++ A  +F+ 
Sbjct: 305 YTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFES 364

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++ KD + WN++++  +Q    + A + F+HM+ + +  +  +   +L  C++    ++G
Sbjct: 365 LEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLG 424

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H    K GLE +  + ++L+ MY+KCG +  A R F EA       WNA+M GY  H
Sbjct: 425 QQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQH 484

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           G    AL  F  ME   VK + ITF+ +L ACSH GLV +G      M    G+ P++EH
Sbjct: 485 GQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEH 544

Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
           Y C VDL GR+G L+EA  +I+ MP +P+  VW   L A +   N  +    A  +LE+E
Sbjct: 545 YACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLLEME 604

Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           P+ +   VL+SN+Y    RW++ A V+R+MKE  VKK PG+S +EVN  VH FI
Sbjct: 605 PEEHCTYVLLSNMYGNLMRWDEKAKVKRLMKERGVKKVPGWSWIEVNNNVHAFI 658



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 231/495 (46%), Gaps = 27/495 (5%)

Query: 74  IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           + T  +A A +L+ H        A+K G   D Y  N ++  Y +C  L SA  LFDEMP
Sbjct: 7   VGTSFRALANLLLNH------SLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMP 60

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
            RD VSW+TMI G+   G  E + +V+R MR            SM+   A      LG+ 
Sbjct: 61  MRDSVSWNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQ 120

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           +H+ +++    E   V   +AL+DMY+KC  L  A   F  +++++ VSW  MI+GY + 
Sbjct: 121 VHSIIIKMGYAEN--VYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQA 178

Query: 254 NEINEGVRLFAEMIEENVFPSEIT---ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
            +      L   M +E     + T   +L L+ +  F     L   LH  I+++G E   
Sbjct: 179 GDRETAFWLLDCMEQEGEKVDDGTYAPLLPLLDDADFC---NLTSQLHGKIIKHGLELVN 235

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKS-KDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
            M NAL+  Y KC  +  A+ +FD     +D++ WN++++AY      D AF+L I M+ 
Sbjct: 236 TMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQE 295

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC--GDV 427
               P+  +   ++S C        G+ LH  + K+G E  V +  AL+ MY K   G +
Sbjct: 296 HGFEPDLYSYTSIISACFNENISNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSM 355

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             A  +F    ++D   WN+++ G    G  E+A+  F+ M  + +  +  +F  +L +C
Sbjct: 356 KEALCIFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSC 415

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           S       G+      +H L L   +E        ++ +  + G++++A    +    + 
Sbjct: 416 SDLATFQLGQQ-----IHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEAS-KN 469

Query: 544 NMIVWGALLAASKLH 558
           + I W AL+     H
Sbjct: 470 SSITWNALMFGYAQH 484



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 183/366 (50%), Gaps = 16/366 (4%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           F  +  I  L  +NSL+ +Y+  ++   A  +   M+++G E D ++  +I+ AC    +
Sbjct: 258 FDSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENI 317

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMY--SECGSLVSARYLFDEMPNRDVVSWSTMI 144
           ++ G+ +HG  IK G +    +SNALI MY  S+ GS+  A  +F+ +  +D VSW++++
Sbjct: 318 SNNGRSLHGLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSIL 377

Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
            G  + G  E+A++    MR   +     +  +++   +D+A   LG+ IH   +     
Sbjct: 378 TGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLATFQLGQQIHVLAL----- 432

Query: 205 EKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
            K G+     ++++LI MYSKCG +  A++ F   ++NS ++W  ++ GY +  + N  +
Sbjct: 433 -KYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFGYAQHGQCNVAL 491

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDM 319
            LF  M  + V    IT ++++  C  +G ++ G K+L       G    +      VD+
Sbjct: 492 DLFFLMEXKKVKMDHITFVAVLTACSHIGLVEQGCKFLRCMESDYGVPPRMEHYACAVDL 551

Query: 320 YGKCREIRSARTLFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
           YG+   +  A+ L + M  K D  +W   + A      I+ A ++  H+   ++ P E  
Sbjct: 552 YGRSGRLEEAKALIEEMPFKPDTTVWKTFLGACRSCGNIELACQVAGHLL--EMEPEEHC 609

Query: 379 MVGLLS 384
              LLS
Sbjct: 610 TYVLLS 615



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 5/295 (1%)

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           H+  ++ G    +   N +++ Y KC+E+RSA  LFD M  +D + WN +I+ +     +
Sbjct: 21  HSLAVKLGTIADVYTCNNILNGYWKCKELRSADVLFDEMPMRDSVSWNTMIAGHINCGNL 80

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
           + ++++   M+      +  T   +L     AG   +G+ +H+ I K G   +V   +AL
Sbjct: 81  EASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGMFHLGQQVHSIIIKMGYAENVYAGSAL 140

Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
           +DMYAKC  +  AY  F      +   WNAM+ GY   G  E A      ME+ G K + 
Sbjct: 141 LDMYAKCEKLEDAYLSFLSISKHNTVSWNAMINGYAQAGDRETAFWLLDCMEQEGEKVDD 200

Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMI 536
            T+  LL     A        +  K++ HGL LV  +     ++    + G LD+A  + 
Sbjct: 201 GTYAPLLPLLDDADFCNLTSQLHGKIIKHGLELVNTM--CNALITSYSKCGSLDDAKRIF 258

Query: 537 KSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMSNIY 589
            S     +++ W +LLAA  L     +       + E   EP  Y Y  ++S  +
Sbjct: 259 DSSAGIRDLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACF 313


>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
 gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
          Length = 551

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 178/543 (32%), Positives = 301/543 (55%), Gaps = 3/543 (0%)

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
           L+ C +      G  IH   + NG   + ++S  LI  YS+ G  VSAR +FD MP R V
Sbjct: 4   LQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTV 63

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
           VSWS  I GY + G  ++AL V  +M     + ++    S++     +  +  G  I  C
Sbjct: 64  VSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGC 123

Query: 198 VVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN 257
           + ++     L   + +AL+D++SKCG +  A  LF  + +  VVSW  +I  Y       
Sbjct: 124 LEKSRFASNL--IVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSG 181

Query: 258 EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALV 317
           +  R+F  M++E + P   T  S++   G    +     +H  I++ G+   ++++ +L+
Sbjct: 182 DSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLI 241

Query: 318 DMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ-AHCIDKAFELFIHMKVSKVRPNE 376
           D Y KC  + SA  L+  M  KD++   A+++ YA+ ++   KA +LF  ++   ++ ++
Sbjct: 242 DAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDD 301

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           V +  + ++C    +L +G+ +H    K     DV +  AL+DMYAK G++  A R F+E
Sbjct: 302 VILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNE 361

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
              +++  W +++ GYG HG G EA+  F  ME  G+KPN ITF+ LL AC+H GL  EG
Sbjct: 362 MEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEG 421

Query: 497 KSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
              F+ M+    ++P+ EH+ CMVDL  R GLL+EA+ +I  M ++PN  +WGA+L A  
Sbjct: 422 WECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGACY 481

Query: 557 LHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGF 616
           ++ N  + E AA  + +++P+N    V++++IYA A  W++   +R++M+E  +KK PG+
Sbjct: 482 IYGNMPLAEEAAIHLFKMDPENSVNYVVLADIYAAAGSWDNAWKMRKLMEERNLKKAPGY 541

Query: 617 SSV 619
           S +
Sbjct: 542 SFI 544



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 231/466 (49%), Gaps = 20/466 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +++ ++ Y +N     AL ++  M + G + + FT  ++L+AC  +     G +I G
Sbjct: 63  VVSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQG 122

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              K+    +  V +AL+ ++S+CG +  A YLF  M  RDVVSW+ +I  Y   G   +
Sbjct: 123 CLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGD 182

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAI 211
           +  + R M    + P      S++      +DV     IH  ++      +LG    +++
Sbjct: 183 SFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLII------QLGYGSHISL 236

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR-CNEINEGVRLFAEMIEEN 270
           + +LID Y+KC +LA A  L+  +    ++S T +++GY R  N  ++ + LF E+ + +
Sbjct: 237 SGSLIDAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMH 296

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           +   ++ + S+   C  +  L +G+ +HA  L+    + +AM NAL+DMY K  EI+ A 
Sbjct: 297 MKIDDVILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDAN 356

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
             F+ M+ K+V+ W ++I+ Y       +A  LF  M+   ++PN++T + LL  C   G
Sbjct: 357 RAFNEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPNDITFLSLLFACNHCG 416

Query: 391 ALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA-IYRDICMWNAM 448
               G +  +  I K  +       + +VD++A+ G +  AY L ++  I  +  +W A+
Sbjct: 417 LTGEGWECFNNMISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAI 476

Query: 449 MAG---YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
           +     YG     EEA I    M+      N + ++ L +  + AG
Sbjct: 477 LGACYIYGNMPLAEEAAIHLFKMD----PENSVNYVVLADIYAAAG 518


>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
 gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
          Length = 606

 Score =  342 bits (877), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 186/552 (33%), Positives = 311/552 (56%), Gaps = 8/552 (1%)

Query: 72  FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECG-SLVSARYLFD 130
           F   ++L+ C + +    G + H  AIK+GLD D +V N+L+ +Y + G +L  AR +FD
Sbjct: 61  FFYASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFD 120

Query: 131 EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
            +  +D++SW++MI GY +   P+++LE+  EM  + I P+   + +++   + + D+ L
Sbjct: 121 GLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRL 180

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           GK  H  V+    D  L   I+TALIDMY +   +  A  +F  L Q   + WT +IS +
Sbjct: 181 GKCFHGVVMVRGFD--LNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAF 238

Query: 251 IRCNEINEGVRLFAEMIEEN-VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
            R +  ++ +  F  M  ++ + P   T  +++  CG +G L+ GK +HA ++ +G   +
Sbjct: 239 TRNDVYDKALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGN 298

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
           + + ++LVDMYGKCR +  ++ +FD M  K+++ W A++  Y    C +  FE  I +  
Sbjct: 299 VFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGY----CQNGDFESVIRIFR 354

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
              + +  +   +L  C    A+  GK +H    K+    DV+ ++ALVD+YAKCG ++ 
Sbjct: 355 EGKKVDTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDF 414

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           AYR+F     R++  WN+M+ G+  +G G E    F +M   G++P+ I+F+G+L ACSH
Sbjct: 415 AYRIFVRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSH 474

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           AGLV +GK  F  M     + P IEHY CM+DLLGRAGLL+EA  +I++   R    +W 
Sbjct: 475 AGLVDQGKKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLWT 534

Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR 609
            LL A     + +  E  A + +E++P ++   V ++N+Y    RW+D   +R +M +  
Sbjct: 535 VLLGACAASPHSATAERIAKKAVELKPDHHLSYVYLANVYRAVGRWDDAVKIRNLMTKRG 594

Query: 610 VKKEPGFSSVEV 621
           V K PG S +E 
Sbjct: 595 VGKMPGTSWIET 606


>gi|297812081|ref|XP_002873924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319761|gb|EFH50183.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 939

 Score =  342 bits (877), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 208/639 (32%), Positives = 332/639 (51%), Gaps = 95/639 (14%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY-------- 127
           + L +CA       G++IHG  +K+G D + ++ N+++ MY++C  LV A          
Sbjct: 300 SALGSCASSNDVTCGRQIHGRVLKSGHDSNGFICNSVLNMYAKCRLLVDAESVFRAHAKL 359

Query: 128 -----------------------LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
                                  LFD MP R  VS++T+I+GY +     EA+E+ REMR
Sbjct: 360 DSASFNIMVDGYARSRRLGDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMR 419

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK--------LGVAIATALI 216
            + I  +EV + +++S  + +  +   K +H+  ++   D++        L   I + L 
Sbjct: 420 NLGIMLNEVTLATVISACSHLGGIWDCKMLHSLAIKLNLDDRVFASTNLLLMYCICSCLK 479

Query: 217 DM---------------------YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
           D                      YSK G +  AK+LF+++ +  +VSW  MI G +R N+
Sbjct: 480 DARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAKELFDQITEKDIVSWGTMIDGCLRKNQ 539

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF------- 308
           ++E +  + EM+   + PSE+ ++ L+       G   G  LH  I++ GF+        
Sbjct: 540 LDEALVYYTEMLRRGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKMGFDCYDFLQAT 599

Query: 309 ------------------------SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
                                    +A  NAL+  + K   +  AR +FD  + KD+  W
Sbjct: 600 IIHFYAVSNNLKLALQQFEVSVKDHIASRNALIAGFVKNGMVEQAREVFDQTRDKDIFSW 659

Query: 345 NAVISAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           NA++S YAQ+     A  LF  M   S+V+P+ +TMV + S  +  G+LE GK  H Y+ 
Sbjct: 660 NAMMSGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHEYLN 719

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA---IYRDICMWNAMMAGYGMHGCGEE 460
           +  +  +  L  A+++MYAKCG +  A  +F +        I  WNA++ G   HG  + 
Sbjct: 720 RSSIPPNDNLIAAIINMYAKCGSIETALNIFHQTKNIFSSTISPWNAIICGSATHGHAKL 779

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           AL  + D++   +KPN ITF+G+L+AC HAGLV  GK+ F+ M    G+ P I+HYGCMV
Sbjct: 780 ALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMV 839

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYG 580
           DLLG++G L+EA EMIK+MP++ ++++WG LL+AS++H N  + E+AA ++  I+P + G
Sbjct: 840 DLLGKSGKLEEAKEMIKNMPVKADVMIWGMLLSASRIHGNVEIAELAAAELAAIDPSHGG 899

Query: 581 YNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
             V++SN+YA A RW DVA VR VM+   V+    FS V
Sbjct: 900 CKVMLSNVYADAGRWEDVALVREVMRTRDVEWSRAFSGV 938


>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 615

 Score =  342 bits (877), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 176/484 (36%), Positives = 277/484 (57%), Gaps = 7/484 (1%)

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
             + R+M  + + P    +  ++   +          IHA  ++      L V     L+
Sbjct: 123 FSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVK--NTLM 180

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
             Y+  G +   +++F++     ++SWT +I  Y +    +E +  F  M   N     +
Sbjct: 181 RFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRM---NCTADRM 237

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEF--SLAMANALVDMYGKCREIRSARTLFD 334
           T++ ++  C  +G   LGK + AY+  + F+    + + NAL+DMY KC +   AR LF 
Sbjct: 238 TLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFH 297

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M  K+++ WN++IS  A      +A  +F  M+   ++P+ VT+VG+L+ C   G LE+
Sbjct: 298 LMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLEL 357

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           GKW+H+YI+K  ++ D  +  ALVDMYAKCG ++ A+ +F     +D+  + AM+ G+ M
Sbjct: 358 GKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAM 417

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           HG  + AL  F +M R GV+P+ +T +G+L+ACSHAGL+ EG+  F  M     L P+ E
Sbjct: 418 HGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTE 477

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HYGCMVDLLGRAGL+ EA      MP+ P+  VWG+LL A K+H    +GE    +++E+
Sbjct: 478 HYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEM 537

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMV 634
           EP+  G  +LMSNIY+ ANRW D    R+ MK+  +KK PG SS+EV+G+VH+F +G   
Sbjct: 538 EPERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSIEVDGMVHEFRKGEKS 597

Query: 635 NWKS 638
           + KS
Sbjct: 598 HPKS 601



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/442 (32%), Positives = 230/442 (52%), Gaps = 9/442 (2%)

Query: 34  NPLTRYNSLVTSY-IKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           NP+  +N+++ S    NN  +   ++Y  M   G   D +T+P +LKAC+Q        +
Sbjct: 100 NPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKACSQSHAFIEALQ 159

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IH  +IK GL  + +V N L++ Y+  G + +   +FD+ P+ D++SW+T+I+ Y + G 
Sbjct: 160 IHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDLISWTTLIQAYSKMGY 219

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
           P EA+     M     R + V ++S  S    + D  LGK I A +  +  D    V + 
Sbjct: 220 PSEAIAAFFRMNCTADRMTLVVVLSACS---QLGDFTLGKKILAYMDHHLFDVHSDVFLG 276

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            AL+DMY KCG    A+QLF+ +   ++VSW  MISG        E + +F  M    + 
Sbjct: 277 NALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLK 336

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P  +T++ ++  C  +G L+LGKW+H+YI +N  +    +ANALVDMY KC  I  A  +
Sbjct: 337 PDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMV 396

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F  MK KDV  + A+I  +A     D+A  +F  M    VRP+ VT+VG+LS C+ AG L
Sbjct: 397 FQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLL 456

Query: 393 EMGKWLHTYIEK-QGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMA 450
           E G+     + +   L+        +VD+  + G ++ A    ++  I  D  +W +++ 
Sbjct: 457 EEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLG 516

Query: 451 GYGMHG---CGEEALIFFVDME 469
              +H     GE  +   ++ME
Sbjct: 517 ACKIHAKVELGETVIQKLIEME 538



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 170/346 (49%), Gaps = 24/346 (6%)

Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV-RLFAEMIEENVFPSEITILSLI 282
           NL YA  L N  +QN V  +  +I      N     +  L+ +M+   + P   T+  L+
Sbjct: 86  NLWYASSLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLPYLL 145

Query: 283 IEC----GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
             C     F+  LQ    +HA+ ++ G   +L + N L+  Y     I +   +FD    
Sbjct: 146 KACSQSHAFIEALQ----IHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPH 201

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
            D++ W  +I AY++     +A   F  M  +  R   +T+V +LS C++ G   +GK +
Sbjct: 202 WDLISWTTLIQAYSKMGYPSEAIAAFFRMNCTADR---MTLVVVLSACSQLGDFTLGKKI 258

Query: 399 HTYIEKQGLEV--DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
             Y++    +V  DV L  AL+DMY KCG  + A +LF     +++  WN+M++G    G
Sbjct: 259 LAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQG 318

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK---SVFDK-MVHGLGLVPK 512
             +EAL  F  M+  G+KP+ +T +G+LN+C++ G +  GK   S  DK  +   G V  
Sbjct: 319 LFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVA- 377

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
                 +VD+  + G +D+A  + ++M  + ++  + A++    +H
Sbjct: 378 ----NALVDMYAKCGSIDQAFMVFQAMKCK-DVYSYTAMIVGFAMH 418



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 83/148 (56%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  +NS+++          AL+++  M+  G + D+ T+  +L +CA +    LGK 
Sbjct: 301 VKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKW 360

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H +  KN +  D YV+NAL+ MY++CGS+  A  +F  M  +DV S++ MI G+   G 
Sbjct: 361 VHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGK 420

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVS 180
            + AL +  EM  M +RP  V ++ ++S
Sbjct: 421 ADRALAIFSEMPRMGVRPDHVTLVGVLS 448


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score =  342 bits (877), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 202/657 (30%), Positives = 341/657 (51%), Gaps = 44/657 (6%)

Query: 24  HFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-------------- 69
           H K + +N+       NSL+T Y K+N P +A +I+  M  +  +V              
Sbjct: 75  HHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNR 134

Query: 70  --------------------DNFTIPTILKACAQVLMTHLGKEIHGFAIKNG-LDGDAYV 108
                               + +    +++AC +      G  + GF +K G  D    V
Sbjct: 135 NCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCV 194

Query: 109 SNALIQMYSECGSLV---SARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
              LI M+ +  SL    SAR +FD+M  ++VV+W+ MI    + G  +EA+++  EM  
Sbjct: 195 GCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLV 254

Query: 166 MD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
                P    +  ++S+ A++  + LGK +H+ V+R+     L + +  +L+DMY+KCG 
Sbjct: 255 SSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRS--GLVLDLCVGCSLVDMYAKCGL 312

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCN--EINEGVRLFAEMI-EENVFPSEITILSL 281
           +  A+++F+ + +++V+SWT +++GY+R       E +R+F+ M+ +  V P+  T   +
Sbjct: 313 VQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGV 372

Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
           +  C  +     G+ +H   ++ G      + N LV +Y K   + SAR  FD +  K++
Sbjct: 373 LKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNL 432

Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
           +    V     +   ++   +L   ++      +  T   LLS     G +  G+ +H  
Sbjct: 433 VSETVVDDTNVKDFNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAM 492

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
           + K G   D+ +  AL+ MY+KCG+   A ++F++    ++  W +++ G+  HG   +A
Sbjct: 493 VVKIGFRTDLSVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKA 552

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVD 521
           L  F +M  +GVKPN +T+I +L+ACSH GL+ E    F  M    G+VP++EHY CMVD
Sbjct: 553 LELFYNMLETGVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVD 612

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGY 581
           LLGR+GLL EA E I SMP   + +VW   L + ++H+N  +GE AA  ILE EP +   
Sbjct: 613 LLGRSGLLSEAIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPAT 672

Query: 582 NVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
            +L+SN+YA   RW DVA +R+ MK+ ++ KE G S +EV   VHKF  G  ++ K+
Sbjct: 673 YILLSNLYATEGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKA 729



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 139/530 (26%), Positives = 254/530 (47%), Gaps = 23/530 (4%)

Query: 73  TIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM 132
           T   +LK C +   THLGK +H     + L  D  + N+LI +YS+    ++A  +F  M
Sbjct: 54  TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113

Query: 133 PN--RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVD 189
            N  RDVVS+S++I  +       +A+E+  ++   D + P+E    +++          
Sbjct: 114 ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFK 173

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLA---YAKQLFNRLNQNSVVSWTVM 246
            G  +   V++    +   V +   LIDM+ K  +LA    A+++F+++ + +VV+WT+M
Sbjct: 174 TGLCLFGFVLKTGYFDS-HVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLM 232

Query: 247 ISGYIRCNEINEGVRLFAEM-IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
           I+   +    +E + LF EM +     P   T+  LI  C  +  L LGK LH++++R+G
Sbjct: 233 ITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSG 292

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ--AHCIDKAFEL 363
               L +  +LVDMY KC  ++ AR +FDGM+  +VM W A+++ Y +       +A  +
Sbjct: 293 LVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRM 352

Query: 364 FIHMKVS-KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYA 422
           F +M +   V PN  T  G+L  C      + G+ +H    K GL     +   LV +YA
Sbjct: 353 FSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVGNGLVSVYA 412

Query: 423 KCGDVNGAYR----LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           K G +  A +    LF + +  +  + +  +  + ++   E+ L   V+   SGV  +  
Sbjct: 413 KSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLN--SEQDLDREVEYVGSGV--SSF 468

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           T+  LL+  +  G + +G+ +   MV  +G    +     ++ +  + G  + A ++   
Sbjct: 469 TYASLLSGAACIGTIGKGEQIH-AMVVKIGFRTDLSVNNALISMYSKCGNKEAALQVFND 527

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMS 586
           M    N+I W +++     H   S        +LE  ++P +  Y  ++S
Sbjct: 528 ME-DCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLS 576



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 141/286 (49%), Gaps = 12/286 (4%)

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           IT   L+ +C       LGK LH  +  +       + N+L+ +Y K  +  +A ++F  
Sbjct: 53  ITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQS 112

Query: 336 MKS--KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGAL 392
           M++  +DV+ ++++IS +A      KA E+F  + +   V PNE     ++  C + G  
Sbjct: 113 MENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFF 172

Query: 393 EMGKWLHTYIEKQG-LEVDVILKTALVDMYAK---CGDVNGAYRLFSEAIYRDICMWNAM 448
           + G  L  ++ K G  +  V +   L+DM+ K     D+  A ++F +   +++  W  M
Sbjct: 173 KTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLM 232

Query: 449 MAGYGMHGCGEEALIFFVDM-ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           +     +G  +EA+  F++M   SG  P+  T  GL++ C+    ++ GK +   ++   
Sbjct: 233 ITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRS- 291

Query: 508 GLVPKIEHYGC-MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
           GLV  +   GC +VD+  + GL+ EA ++   M    N++ W AL+
Sbjct: 292 GLVLDL-CVGCSLVDMYAKCGLVQEARKVFDGMR-EHNVMSWTALV 335


>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
          Length = 768

 Score =  342 bits (877), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 170/451 (37%), Positives = 261/451 (57%), Gaps = 32/451 (7%)

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           +A  L++ Y++ G+   A+++FN +    +VSWT +IS Y+  ++  +   +F+ +    
Sbjct: 290 LACKLLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSG 349

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG--------- 321
           + P    ++  +  CG    L  G+ +H  + R        + NAL+DMY          
Sbjct: 350 LRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVAC 409

Query: 322 ----------------------KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
                                 KC +I +AR +FD M  ++ + W A+I+ Y Q      
Sbjct: 410 SVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIP 469

Query: 360 AFELFIHMKVS-KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALV 418
             ELF  M+   K  P  +T+V +LS C + GA ++G  +H Y+ K  L++DV +  AL+
Sbjct: 470 GLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALM 529

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           DMYAK G +  A ++F E   RD+  W  M++G  +HG G  AL  F DM +SG  PN +
Sbjct: 530 DMYAKSGALVLALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEV 589

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           T + +L+ACSHAGLV EG+S+F KMV   G+ PKI+HYGCMVDLLGRAGLL EA E+I+ 
Sbjct: 590 TLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEH 649

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDV 598
           MP++P+ ++W +LL+A  +H N ++ E+A   I+E+EP + G  +L+ NIY  A+RW D 
Sbjct: 650 MPIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDA 709

Query: 599 AGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
              R+ M++ RVKK+PG S VEVNG+VH+F+
Sbjct: 710 LKARKAMRDRRVKKKPGCSWVEVNGVVHEFL 740



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 188/404 (46%), Gaps = 42/404 (10%)

Query: 91  KEIHGFAIKNGL--DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           K+IHG A+  GL      +++  L+  Y++ GS V A+ +F+ + N D+VSW+ +I  Y 
Sbjct: 271 KQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYL 330

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
               P +A  +   +    +RP    ++  VS      D+  G+ +H  V R     +LG
Sbjct: 331 HTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRF----ELG 386

Query: 209 VA--IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
               +  ALIDMYS+ G +  A  +F  +    V SWT +++G+I+CN+I    R+F EM
Sbjct: 387 SDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEM 446

Query: 267 IEENV--------------------------------FPSEITILSLIIECGFVGGLQLG 294
              N                                 +P+ ITI++++  C  +G   LG
Sbjct: 447 PMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLG 506

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
             +H Y+ +   +  + + NAL+DMY K   +  A  +F  M  +DV  W  +IS  A  
Sbjct: 507 SSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMISGLALH 566

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL-HTYIEKQGLEVDVIL 413
                A E F  M  S   PNEVT++ +LS C+ AG +  G+ L    ++  G++  +  
Sbjct: 567 GKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQH 626

Query: 414 KTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
              +VD+  + G +  A  L     I  D  +W ++++   +HG
Sbjct: 627 YGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLVHG 670



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 180/357 (50%), Gaps = 37/357 (10%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           + +I NP +  +  L++ Y+  ++P  A +I++ +  +G   D+F +   + AC      
Sbjct: 311 FNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDL 370

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYS------------------------------ 117
             G+ +HG   +  L  D  V NALI MYS                              
Sbjct: 371 SNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGF 430

Query: 118 -ECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR-PSEVAM 175
            +C  + +AR +FDEMP R+ VSW+ MI GY +G +P   LE+ +EMR      P+ + +
Sbjct: 431 IKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITI 490

Query: 176 ISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL 235
           ++++S  AD+   DLG ++H  V +   D  L V +  AL+DMY+K G L  A ++F  +
Sbjct: 491 VAVLSGCADIGAFDLGSSVHGYVNKTNLD--LDVTVNNALMDMYAKSGALVLALKIFQEM 548

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
            +  V SWT MISG     +    +  F++M +    P+E+T+LS++  C   G +  G+
Sbjct: 549 PKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLVVEGR 608

Query: 296 WLHAYILR-NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISA 350
            L   +++ +G +  +     +VD+ G+   +R A+ L + M  K D +IW +++SA
Sbjct: 609 SLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSA 665



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 19/186 (10%)

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI--LKTALVDMYAKCGDVNGAYR 432
           N  T   LL  C   G+LE  K +H      GL       L   L++ Y + G    A +
Sbjct: 253 NTQTFYFLLQKC---GSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQK 309

Query: 433 LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL 492
           +F+     DI  W  +++ Y       +A   F  +  SG++P+    +G ++AC H   
Sbjct: 310 VFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKD 369

Query: 493 VTEGKSVFDKMVHG------LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
           ++ G+     +VHG      LG  P + +   ++D+  R+G ++ A  + K+M ++ ++ 
Sbjct: 370 LSNGR-----IVHGMVFRFELGSDPIVGN--ALIDMYSRSGAIEVACSVFKTMEIK-DVS 421

Query: 547 VWGALL 552
            W +LL
Sbjct: 422 SWTSLL 427


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 218/689 (31%), Positives = 356/689 (51%), Gaps = 67/689 (9%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIK------THFKFSYTN-------------IINPLTR--- 38
           +K   G  +L   +Q HAH+ K      T    S  N             + + +T    
Sbjct: 92  LKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDD 151

Query: 39  --YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM-THLGKEIHG 95
             +NS++ +  +  +   A++++  M        +FT+ ++  AC+ ++    LGK++H 
Sbjct: 152 VSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHA 211

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F ++NG D   + +NAL+ MY++ G +  A+ LFD   ++D+VSW+T+I    +    EE
Sbjct: 212 FVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEE 270

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL  +  M    +RP+ V + S++   + +  +  GK IHA V+ N  D      +  AL
Sbjct: 271 ALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMN-NDLIENSFVGCAL 329

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-EGVRLFAEMI-EENVFP 273
           +DMY  C      + +F+ + + ++  W  MI+GY+R NE + E + LF EM+ E  + P
Sbjct: 330 VDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVR-NEFDYEAIELFVEMVFELGLSP 388

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           + +T+ S++  C         + +H+ +++ GFE    + NAL+DMY +   I  AR++F
Sbjct: 389 NSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIF 448

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK------------------VRPN 375
             M  KD++ WN +I+ Y      D A  L   M+  +                  ++PN
Sbjct: 449 GSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPN 508

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
            VT++ +L  C    AL  GK +H Y  KQ L  DV + +ALVDMYAKCG +N +  +F 
Sbjct: 509 SVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFE 568

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG-----VKPNGITFIGLLNACSHA 490
           +   R++  WN ++  YGMHG GEEAL  F  M   G     ++PN +T+I +  + SH+
Sbjct: 569 QMSVRNVITWNVLIMAYGMHGKGEEALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHS 628

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI-VWG 549
           G+V EG ++F  M    G+ P  +HY C+VDLLGR+G ++EA+ +IK+MP     +  W 
Sbjct: 629 GMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWS 688

Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR 609
           +LL A K+H+N  +GEIAA  +  ++P    Y    S +              R MKE  
Sbjct: 689 SLLGACKIHQNLEIGEIAAKNLFVLDPNVLDYGTKQSML-------------GRKMKEKG 735

Query: 610 VKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           V+KEPG S +E    VHKF+ G + + +S
Sbjct: 736 VRKEPGCSWIEHGDEVHKFLAGDVSHPQS 764



 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 165/548 (30%), Positives = 275/548 (50%), Gaps = 33/548 (6%)

Query: 38  RYNSLVTSYIKNNKPSS-----ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           R  S   S++++   SS     A++ Y  M   G   DNF  P +LKA A +   +LGK+
Sbjct: 47  RLPSEWVSHLRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQ 106

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H    K G      V N+L+ MY +CG + +AR +FDE+ NRD VSW++MI    R   
Sbjct: 107 LHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEE 166

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD-VDLGKAIHACVVRNCKDEKLGVAI 211
            E A+ + R M   ++ P+   ++S+    +++ + + LGK +HA V+RN          
Sbjct: 167 WELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTF---T 223

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
             AL+ MY+K G +  AK LF+  +   +VSW  +IS   + +   E +     M++  V
Sbjct: 224 NNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGV 283

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNG--FEFSLAMANALVDMYGKCREIRSA 329
            P+ +T+ S++  C  +  L  GK +HA++L N    E S  +  ALVDMY  C++    
Sbjct: 284 RPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSF-VGCALVDMYCNCKQPEKG 342

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS-KVRPNEVTMVGLLSLCTE 388
           R +FDGM  + + +WNA+I+ Y +     +A ELF+ M     + PN VT+  +L  C  
Sbjct: 343 RLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVR 402

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
             +    + +H+ + K G E D  ++ AL+DMY++ G +  A  +F     +DI  WN M
Sbjct: 403 CESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTM 462

Query: 449 MAGYGMHGCGEEALIFFVDMERS------------------GVKPNGITFIGLLNACSHA 490
           + GY + G  ++AL    DM+R                    +KPN +T + +L  C+  
Sbjct: 463 ITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAAL 522

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
             + +GK +    V  + L   +     +VD+  + G L+ +  + + M +R N+I W  
Sbjct: 523 AALGKGKEIHAYAVKQM-LSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVR-NVITWNV 580

Query: 551 LLAASKLH 558
           L+ A  +H
Sbjct: 581 LIMAYGMH 588


>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
 gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 171/451 (37%), Positives = 262/451 (58%), Gaps = 32/451 (7%)

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           +A  L++ Y++ G+   A+++FN +    +VSWT +IS Y+  ++  +   +F+ +    
Sbjct: 39  LACKLLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSG 98

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG--------- 321
           + P    ++  +  CG    L  G+ +H  + R        + NAL+DMY          
Sbjct: 99  LRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVAC 158

Query: 322 ----------------------KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
                                 KC +I +AR +FD M  ++ + W A+I+ Y Q      
Sbjct: 159 SVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIP 218

Query: 360 AFELFIHMKVS-KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALV 418
             ELF  M+   K  P  +T+V +LS C + GA ++G  +H Y+ K  L++DV +  AL+
Sbjct: 219 GLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALM 278

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           DMYAK G +  A ++F E   RD+  W  M++G  +HG G  AL  F DM +SGV PN +
Sbjct: 279 DMYAKSGALVLALKIFQEMPKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEV 338

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           T + +L+ACSHAGLV EG+S+F KMV   G+ PKI+HYGCMVDLLGRAGLL EA E+I+ 
Sbjct: 339 TLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEH 398

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDV 598
           MP++P+ ++W +LL+A  +H N ++ E+A   I+E+EP + G  +L+ NIY  A+RW D 
Sbjct: 399 MPIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDA 458

Query: 599 AGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
              R+ M++ RVKK+PG S VEVNG+VH+F+
Sbjct: 459 LKARKAMRDRRVKKKPGCSWVEVNGVVHEFL 489



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 189/404 (46%), Gaps = 42/404 (10%)

Query: 91  KEIHGFAIKNGL--DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           K+IHG A+  GL      +++  L+  Y++ GS V A+ +F+ + N D+VSW+ +I  Y 
Sbjct: 20  KQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYL 79

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
               P +A  +   +    +RP    ++  VS      D+  G+ +H  V R     +LG
Sbjct: 80  HTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHGMVFRF----ELG 135

Query: 209 V--AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
               +  ALIDMYS+ G +  A  +F  +    V SWT +++G+I+CN+I    R+F EM
Sbjct: 136 SDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEAARRIFDEM 195

Query: 267 IEENV--------------------------------FPSEITILSLIIECGFVGGLQLG 294
              N                                 +P+ ITI++++  C  +G   LG
Sbjct: 196 PMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLG 255

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
             +H Y+ +   +  + + NAL+DMY K   +  A  +F  M  +DV  W  +IS  A  
Sbjct: 256 SSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTTMISGLALH 315

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL-HTYIEKQGLEVDVIL 413
                A E F  M  S V PNEVT++ +LS C+ AG +  G+ L    ++  G++  +  
Sbjct: 316 GKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQH 375

Query: 414 KTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
              +VD+  + G +  A  L     I  D  +W ++++   +HG
Sbjct: 376 YGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSACLVHG 419



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 181/357 (50%), Gaps = 37/357 (10%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           + +I NP +  +  L++ Y+  ++P  A +I++ +  +G   D+F +   + AC      
Sbjct: 60  FNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDL 119

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYS------------------------------ 117
             G+ +HG   +  L  D  V NALI MYS                              
Sbjct: 120 SNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGF 179

Query: 118 -ECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR-PSEVAM 175
            +C  + +AR +FDEMP R+ VSW+ MI GY +G +P   LE+ +EMR      P+ + +
Sbjct: 180 IKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITI 239

Query: 176 ISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL 235
           ++++S  AD+   DLG ++H  V +   D  L V +  AL+DMY+K G L  A ++F  +
Sbjct: 240 VAVLSGCADIGAFDLGSSVHGYVNKTNLD--LDVTVNNALMDMYAKSGALVLALKIFQEM 297

Query: 236 NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
            +  V SWT MISG     +    +  F++M +  V P+E+T+LS++  C   G +  G+
Sbjct: 298 PKRDVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGR 357

Query: 296 WLHAYILR-NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISA 350
            L   +++ +G +  +     +VD+ G+   +R A+ L + M  K D +IW +++SA
Sbjct: 358 SLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPDSVIWRSLLSA 414



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 85/186 (45%), Gaps = 19/186 (10%)

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVI--LKTALVDMYAKCGDVNGAYR 432
           N  T   LL  C   G+LE  K +H      GL       L   L++ Y + G    A +
Sbjct: 2   NTQTFYFLLQKC---GSLEKLKQIHGKAVTLGLLCSKRQHLACKLLNTYTQLGSPVDAQK 58

Query: 433 LFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL 492
           +F+     DI  W  +++ Y       +A   F  +  SG++P+    +G ++AC H   
Sbjct: 59  VFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKD 118

Query: 493 VTEGKSVFDKMVHG------LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
           ++ G     ++VHG      LG  P + +   ++D+  R+G ++ A  + K+M ++ ++ 
Sbjct: 119 LSNG-----RIVHGMVFRFELGSDPIVGN--ALIDMYSRSGAIEVACSVFKTMEIK-DVS 170

Query: 547 VWGALL 552
            W +LL
Sbjct: 171 SWTSLL 176


>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
          Length = 602

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 180/532 (33%), Positives = 298/532 (56%), Gaps = 41/532 (7%)

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFM--DIRPSEVAMISMVSLFADVADVDLGKA 193
           +V  W+TMIR     GL      ++  M+ +   +RP+    + ++       +V  G+ 
Sbjct: 53  NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEE 112

Query: 194 IHACVVRN---CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           +HA VVR    C +      ++ AL+  Y  CG +   +Q+F+ + Q  +V WT++I  Y
Sbjct: 113 VHASVVRTGFACSE-----FVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAY 167

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSL 310
           +      + + LF  M E  + P  + + +++  CG +G L + K +H +I ++G E   
Sbjct: 168 VCVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDA 227

Query: 311 AMANALVDMYGKCREIRSA-------------------------------RTLFDGMKSK 339
            +++ L+  YG+C  +  A                               + LF  M  +
Sbjct: 228 FVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDR 287

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           DV+ WN++I  +A+     +A   F  M+ S V PN +T++  LS C   GAL+ G W+H
Sbjct: 288 DVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIH 347

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
            Y++K  +  D  L ++L+DMY+KCGD++ A ++F E+  RD+  W +++ G  MHG GE
Sbjct: 348 AYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGE 407

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           +AL +F  M+ + V+P+ +T +G+L+AC+HAGL+ +G   F  M    GLVPK+EHYG M
Sbjct: 408 KALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGXM 467

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNY 579
           VDLLGR G L EA+++I  MP+  N I+WGA L+A ++H N  +GE+AA ++L + P++ 
Sbjct: 468 VDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLXPRDP 527

Query: 580 GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
              V++SN+YA   +W+   G+R+ +K+  +KK PG SS+EVNG VH F+ G
Sbjct: 528 WARVMLSNMYAEEAKWDRSMGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVG 579



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 218/456 (47%), Gaps = 45/456 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMR--KNGSEVDNFTIPTILKACAQVLMTHLGKEIHGF 96
           +N+++   ++N   +    +  +M+  + G   +  T   +LKA         G+E+H  
Sbjct: 57  WNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEEVHAS 116

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
            ++ G     +VS AL+  Y  CG +   R +FDEM    +V W+ +IR Y     PE+A
Sbjct: 117 VVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKA 176

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IA 212
           LE+ R MR + + P  VA+ ++VS    + D+ + KA+H      C  EK G+     ++
Sbjct: 177 LELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMH------CFIEKSGIEVDAFVS 230

Query: 213 TALIDMYSKCGNLAYA-------------------------------KQLFNRLNQNSVV 241
           + LI  Y +CG+L YA                               KQLF  +    VV
Sbjct: 231 STLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVV 290

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           SW  MI G+ R  +  E +  F EM    V P+ +T+LS +  C   G L  G W+HAY+
Sbjct: 291 SWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYV 350

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
            +N      ++ ++L+DMY KC +I  A  +F+    +D+  W +++   A     +KA 
Sbjct: 351 DKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKAL 410

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVDVILKTALVDM 420
             F  MK ++V+P++VTMVG+LS C  AG L+ G W    +EK  GL   V     +VD+
Sbjct: 411 HYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGXMVDL 470

Query: 421 YAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMH 455
             + G +  AY L     +  +  +W A ++   +H
Sbjct: 471 LGRMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVH 506



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 168/348 (48%), Gaps = 35/348 (10%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +  ++ +Y+    P  AL ++  MR+ G   D   + T++ AC  +    + K +H 
Sbjct: 157 LVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHC 216

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSA------------------------------ 125
           F  K+G++ DA+VS+ LI  Y ECGSL  A                              
Sbjct: 217 FIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLEL 276

Query: 126 -RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
            + LF  MP+RDVVSW++MI G+ R G  +EAL    EM F  + P+ + ++S +S  A 
Sbjct: 277 GKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACAS 336

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
              +D G  IHA V +N  D     ++ ++LIDMYSKCG++  A Q+F    +  + +WT
Sbjct: 337 HGALDTGAWIHAYVDKN--DMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWT 394

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR- 303
            ++ G        + +  F++M E  V P ++T++ ++  C   G L  G W    + + 
Sbjct: 395 SIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKV 454

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
            G    +     +VD+ G+   ++ A  L  GM    + +IW A +SA
Sbjct: 455 FGLVPKVEHYGXMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLSA 502



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 167/365 (45%), Gaps = 47/365 (12%)

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM--IEENVFPSEITILSLIIECGFVGG 290
           +RL+  +V  W  MI   +    I     L   M  +   + P+  T + L+     V G
Sbjct: 47  SRLDCANVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLK--ALVSG 104

Query: 291 LQL--GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
            ++  G+ +HA ++R GF  S  ++ AL+  Y  C  +   R +FD M+   +++W  +I
Sbjct: 105 QEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLII 164

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
            AY      +KA ELF  M+   + P+ V +  ++S C   G L + K +H +IEK G+E
Sbjct: 165 RAYVCVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIE 224

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIY----------------------------- 439
           VD  + + L+  Y +CG ++ AYR F E                                
Sbjct: 225 VDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSM 284

Query: 440 --RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
             RD+  WN+M+ G+   G  +EAL +F +ME SGV PN +T +  L+AC+  G +  G 
Sbjct: 285 PDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTG- 343

Query: 498 SVFDKMVHGLGLVPKIEHYG----CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
                 +H       +   G     ++D+  + G +D+A ++ +    R ++  W +++ 
Sbjct: 344 ----AWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEE-STRRDLFTWTSIVC 398

Query: 554 ASKLH 558
              +H
Sbjct: 399 GLAMH 403


>gi|356522333|ref|XP_003529801.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 650

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 199/544 (36%), Positives = 301/544 (55%), Gaps = 37/544 (6%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           K+IH   IK GL  D    N +I      E G++  A  +FD +P+  +  W+TMI+GY 
Sbjct: 24  KQIHSHTIKMGLSSDPLFRNRVIAFCCAHESGNMNYAHQVFDTIPHPSMFIWNTMIKGYS 83

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           +   PE  + +   M   +I+P        +  F     +  GK +    V++  D  L 
Sbjct: 84  KISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELLNHAVKHGFDSNLF 143

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V    A I M+S CG +  A ++F+  +   VV+W +M+SGY R  +             
Sbjct: 144 VQ--KAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNRVKQF------------ 189

Query: 269 ENVFPSEITILSLIIE-CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
                 +I+ + L++  C  +  L+ GK +  YI  NG          +  M+  C E+ 
Sbjct: 190 ------KISKMLLVLSACSKLKDLEWGKHIFKYI--NG--------GIVEHMFAACGEMD 233

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            A+ +FD MK++DV+ W A+I  Y + +    A  LF  M++S V+P+E TMV +L  C 
Sbjct: 234 EAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFTMVSILIACA 293

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
             GALE+G+W+ T I+K   + D  +  ALVDMY KCG+V  A ++F E   +D   W  
Sbjct: 294 LLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMYQKDKFTWTT 353

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           M+ G  ++G GEEAL  F +M  + V P+ IT+IG+L AC    +V +GKS F  M    
Sbjct: 354 MIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCAC----MVDKGKSFFTNMTMQH 409

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
           G+ P + HYGCMVDLLG  G L+EA E+I +MP++PN IVWG+ L A ++HKN  + ++A
Sbjct: 410 GIKPTVTHYGCMVDLLGCVGCLEEALEVIVNMPVKPNSIVWGSPLGACRVHKNVQLADMA 469

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHK 627
           A QILE+EP+N    VL+ NIYA + +W ++  VR++M E  +KK PG S +E+NG V++
Sbjct: 470 AKQILELEPENGAVYVLLCNIYAASKKWENLCQVRKLMMERGIKKTPGCSLMELNGNVYE 529

Query: 628 FIRG 631
           F+ G
Sbjct: 530 FVAG 533



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 131/451 (29%), Positives = 213/451 (47%), Gaps = 70/451 (15%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  Y K + P + +++Y  M  +  + D FT P  LK   + +    GKE+   A+
Sbjct: 75  WNTMIKGYSKISHPENGVSMYLLMLTSNIKPDRFTFPFSLKGFTRDMALQHGKELLNHAV 134

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G D + +V  A I M+S CG +  A  +FD     +VV+W+ M+ GY+R         
Sbjct: 135 KHGFDSNLFVQKAFIHMFSLCGIVDLAHKVFDMGDACEVVTWNIMLSGYNR--------- 185

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID- 217
            +++ +          M+ ++S  + + D++ GK I                I   +++ 
Sbjct: 186 -VKQFKI-------SKMLLVLSACSKLKDLEWGKHIFK-------------YINGGIVEH 224

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           M++ CG +  A+ +F+ +    VVSWT MI GY+R N     + LF EM   NV P E T
Sbjct: 225 MFAACGEMDEAQGVFDNMKTRDVVSWTAMIDGYLRMNHFIGALALFREMQMSNVKPDEFT 284

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++S++I C  +G L+LG+W+   I +N  +    + NALVDMY KC  +R A+ +F  M 
Sbjct: 285 MVSILIACALLGALELGEWVKTCIDKNSNKNDSFVGNALVDMYFKCGNVRKAKKVFKEMY 344

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KD   W  +I   A     ++A  +F +M  + V P+E+T +G+L  C     ++ GK 
Sbjct: 345 QKDKFTWTTMIVGLAINGHGEEALAMFSNMIEASVTPDEITYIGVLCACM----VDKGKS 400

Query: 398 LHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
             T +  Q G++  V     +VD+                                G  G
Sbjct: 401 FFTNMTMQHGIKPTVTHYGCMVDL-------------------------------LGCVG 429

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
           C EEAL   V+M    VKPN I +   L AC
Sbjct: 430 CLEEALEVIVNMP---VKPNSIVWGSPLGAC 457


>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 620

 Score =  342 bits (877), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 190/497 (38%), Positives = 276/497 (55%), Gaps = 6/497 (1%)

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
            SW+  +R      L  E++ + R M      P   +   ++   A ++    G+ +H  
Sbjct: 16  TSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCH 75

Query: 198 VVRN-CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV--VSWTVMISGYIRCN 254
           V+R  C+ E     + TALI MY KCG +  A+++F     +S   V +  +ISGY   +
Sbjct: 76  VIRGGCEAEPF---VLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANS 132

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
           ++++   +F  M E  V    +TIL L+  C     L LG+ LH   ++ G    +A+ N
Sbjct: 133 KVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLN 192

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
           + + MY KC  + S R LFD M  K ++ WNAVIS Y+Q        ELF  MK S V P
Sbjct: 193 SFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCP 252

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           +  T+V +LS C   GA ++G+ +   +E  G   +V L  AL+ MYA+CG++  A  +F
Sbjct: 253 DPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVF 312

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
                + +  W AM+  YGMHG GE  L  F DM + G++P+G  F+ +L+ACSH+GL  
Sbjct: 313 DIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD 372

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +G  +F  M     L P  EHY C+VDLLGRAG LDEA E I SMP+ P+  VWGALL A
Sbjct: 373 KGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGA 432

Query: 555 SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEP 614
            K+HKN  M E+A  +++E EP N GY VLMSNIY+ +     +  +R +M+E   +K+P
Sbjct: 433 CKIHKNVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKP 492

Query: 615 GFSSVEVNGLVHKFIRG 631
           G+S VE  G VH F+ G
Sbjct: 493 GYSYVEHKGKVHLFLAG 509



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 208/408 (50%), Gaps = 8/408 (1%)

Query: 53  SSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNAL 112
           + ++++Y  M ++GS  D F+ P ILK+CA + +   G+++H   I+ G + + +V  AL
Sbjct: 32  TESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTAL 91

Query: 113 IQMYSECGSLVSARYLFDEMPNRDV--VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRP 170
           I MY +CG +  AR +F+E P+     V ++ +I GY       +A  + R M+   +  
Sbjct: 92  ISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDAAFMFRRMKETGVSV 151

Query: 171 SEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
             V ++ +V L      + LG+++H  CV      E   VA+  + I MY KCG++   +
Sbjct: 152 DSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSE---VAVLNSFITMYMKCGSVESGR 208

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           +LF+ +    +++W  +ISGY +     + + LF +M    V P   T++S++  C  +G
Sbjct: 209 RLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLG 268

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
             ++G+ +   +  NGF  ++ ++NAL+ MY +C  +  AR +FD M  K ++ W A+I 
Sbjct: 269 AKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIG 328

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLE 408
            Y      +    LF  M    +RP+    V +LS C+ +G  + G  L   ++++  LE
Sbjct: 329 CYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLE 388

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMH 455
                 + LVD+  + G ++ A     S  +  D  +W A++    +H
Sbjct: 389 PGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIH 436



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 164/318 (51%), Gaps = 12/318 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+L++ Y  N+K S A  ++  M++ G  VD+ TI  ++  C       LG+ +HG  +
Sbjct: 121 YNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECV 180

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G   +  V N+ I MY +CGS+ S R LFDEMP + +++W+ +I GY + GL  + LE
Sbjct: 181 KGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLE 240

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+   + P    ++S++S  A +    +G+ +   V  N       V ++ ALI M
Sbjct: 241 LFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEAN--GFAPNVFLSNALISM 298

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y++CGNLA A+ +F+ +   S+VSWT MI  Y        G+ LF +MI+  + P     
Sbjct: 299 YARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVF 358

Query: 279 LSLIIECGFVG----GLQLGKWL-HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           + ++  C   G    GL+L + +   Y L  G E      + LVD+ G+   +  A    
Sbjct: 359 VMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH----YSCLVDLLGRAGRLDEAMEFI 414

Query: 334 DGMK-SKDVMIWNAVISA 350
           D M    D  +W A++ A
Sbjct: 415 DSMPVEPDGAVWGALLGA 432



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 164/340 (48%), Gaps = 7/340 (2%)

Query: 232 FNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL 291
           F R +  +  SW V +      +   E + L+  M+     P   +   ++  C  +   
Sbjct: 7   FVRNSAVASTSWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLP 66

Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD--GMKSKDVMIWNAVIS 349
             G+ LH +++R G E    +  AL+ MY KC  +  AR +F+     S+  + +NA+IS
Sbjct: 67  VSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALIS 126

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
            Y     +  A  +F  MK + V  + VT++GL+ LCT    L +G+ LH    K G   
Sbjct: 127 GYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYS 186

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           +V +  + + MY KCG V    RLF E   + +  WNA+++GY  +G   + L  F  M+
Sbjct: 187 EVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMK 246

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
            SGV P+  T + +L++C+H G    G+ V  ++V   G  P +     ++ +  R G L
Sbjct: 247 SSGVCPDPFTLVSVLSSCAHLGAKKIGQEV-GELVEANGFAPNVFLSNALISMYARCGNL 305

Query: 530 DEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            +A  +   MP++ +++ W A++    +H    MGE   T
Sbjct: 306 AKARAVFDIMPVK-SLVSWTAMIGCYGMH---GMGETGLT 341



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 1/203 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  +N++++ Y +N      L ++  M+ +G   D FT+ ++L +CA +    +G+E
Sbjct: 216 VKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQE 275

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +      NG   + ++SNALI MY+ CG+L  AR +FD MP + +VSW+ MI  Y   G+
Sbjct: 276 VGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGM 335

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            E  L +  +M    IRP     + ++S  +     D G  +   + R  K E  G    
Sbjct: 336 GETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEP-GPEHY 394

Query: 213 TALIDMYSKCGNLAYAKQLFNRL 235
           + L+D+  + G L  A +  + +
Sbjct: 395 SCLVDLLGRAGRLDEAMEFIDSM 417


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  342 bits (876), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 173/462 (37%), Positives = 281/462 (60%), Gaps = 4/462 (0%)

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
           + P       M++    +  +  G+AIHA +  +  ++ L   +   +++MY+KCG+L  
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDL--VLLNFILNMYAKCGSLEE 158

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A+ LF+++    +VSWTV+ISGY +  + +E + LF +M+     P+E T+ SL+   G 
Sbjct: 159 AQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGT 218

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
                 G+ LHA+ L+ G++ ++ + ++L+DMY +   +R A+ +F+ + +K+V+ WNA+
Sbjct: 219 GPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNAL 278

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           I+ +A+    +    LF  M      P   T   +L+ C  +G+LE GKW+H ++ K G 
Sbjct: 279 IAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLA-CASSGSLEQGKWVHAHVIKSGG 337

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
           +    +   L+DMYAK G +  A ++F   + +DI  WN++++GY  HG G EAL  F  
Sbjct: 338 QPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQ 397

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           M ++ V+PN ITF+ +L ACSH+GL+ EG+  F+ M     +  ++ H+  +VDLLGRAG
Sbjct: 398 MLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKH-KIEAQVAHHVTVVDLLGRAG 456

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSN 587
            L+EA++ I+ MP++P   VWGALL A ++HKN  +G  AA QI E++P + G +VL+SN
Sbjct: 457 RLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSN 516

Query: 588 IYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           IYA A R +D A VR++MKE  VKKEP  S VE+   VH F+
Sbjct: 517 IYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFV 558



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 218/402 (54%), Gaps = 9/402 (2%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
           +L  C  +     G+ IH     +  + D  + N ++ MY++CGSL  A+ LFD+MP +D
Sbjct: 111 MLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKD 170

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           +VSW+ +I GY + G   EAL +  +M  +  +P+E  + S++           G+ +HA
Sbjct: 171 MVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA 230

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
             ++   D  + V + ++L+DMY++  ++  AK +FN L   +VVSW  +I+G+ R  E 
Sbjct: 231 FSLKYGYD--MNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEG 288

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
              +RLF +M+ +   P+  T  S ++ C   G L+ GKW+HA+++++G +    + N L
Sbjct: 289 EHVMRLFXQMLRQGFEPTHFT-YSSVLACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTL 347

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           +DMY K   I+ A+ +F  +  +D++ WN++IS YAQ     +A +LF  M  +KV+PNE
Sbjct: 348 IDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNE 407

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           +T + +L+ C+ +G L+ G++    ++K  +E  V     +VD+  + G +N A +   E
Sbjct: 408 ITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEE 467

Query: 437 -AIYRDICMWNAMMAGYGMH-----GCGEEALIFFVDMERSG 472
             I     +W A++    MH     G      IF +D   SG
Sbjct: 468 MPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSG 509



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 168/316 (53%), Gaps = 4/316 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +  L++ Y ++ + S AL ++  M   G + + FT+ ++LKA       H G+++H 
Sbjct: 171 MVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHA 230

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           F++K G D + +V ++L+ MY+    +  A+ +F+ +  ++VVSW+ +I G+ R G  E 
Sbjct: 231 FSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEH 290

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            + +  +M      P+     S+++  A    ++ GK +HA V+++         I   L
Sbjct: 291 VMRLFXQMLRQGFEPTHFTYSSVLAC-ASSGSLEQGKWVHAHVIKSGGQPI--AYIGNTL 347

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           IDMY+K G++  AK++F RL +  +VSW  +ISGY +     E ++LF +M++  V P+E
Sbjct: 348 IDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNE 407

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           IT LS++  C   G L  G++    + ++  E  +A    +VD+ G+   +  A    + 
Sbjct: 408 ITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEE 467

Query: 336 MKSKDV-MIWNAVISA 350
           M  K    +W A++ A
Sbjct: 468 MPIKPTAAVWGALLGA 483


>gi|414887787|tpg|DAA63801.1| TPA: hypothetical protein ZEAMMB73_367984 [Zea mays]
          Length = 711

 Score =  342 bits (876), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 193/584 (33%), Positives = 315/584 (53%), Gaps = 7/584 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTHLGKEIHG-- 95
           +N+++   +   + S AL  Y  M ++GS V D FT P +LKACA +     G+++    
Sbjct: 128 WNAVIKGLVDAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGRKVQENV 187

Query: 96  -FAIKNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
              I  G+  G+ +V  AL+ M+++CG L  AR +F+ M  RD+ SW+ MI G  RGG  
Sbjct: 188 ETDIARGIAKGNVFVQCALVDMFAKCGCLGEARNMFESMGVRDLASWTAMIGGAVRGGDW 247

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            E + +++ M+    RP  +   +++     V ++  G A+H   V+    +   + +  
Sbjct: 248 LEVMTLLKRMKSEGFRPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVGDD--ICVPN 305

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMY KC  L  A  LF  ++   V SW+ +I+G+ +    N  V LF EM+   + P
Sbjct: 306 ALVDMYCKCARLDMAASLFWSIDHKDVFSWSTIIAGHSQNRIYNVSVSLFTEMVASGIKP 365

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +  TI S++     +  L+ GK +H + LRN  E S  +A+AL+D Y +   IR A+ +F
Sbjct: 366 NSTTIASILPSISELRLLRYGKEIHCFSLRNRLEHSEFLASALIDFYCRQGYIRDAQIVF 425

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           +     D+++ N++I  Y      + A  L   +    +RP+ VT+V +L LC +   L 
Sbjct: 426 EFKPKNDLVVLNSMIRGYVVNKDSESALRLLRALLKEGLRPDHVTVVSVLPLCNQPSRLL 485

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            GK LH Y  +  +     +  AL DMY KCG +  A ++F     R+   +N +++  G
Sbjct: 486 QGKELHAYAIRHNISSCFSVTNALTDMYCKCGCLEIANKIFLLMTERNTVTYNTLISSLG 545

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            HG  ++A I F  M+R GV P+ +TF+ LL+ CSH GL+ +G   +D M+    + P  
Sbjct: 546 KHGHADQAFILFDLMKRDGVSPDKVTFVALLSCCSHGGLIDKGLCFYDSMLRDYNIPPDK 605

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHY C+VDL  R+G LD+A   I ++   P + V G LL+A + H    + E+ A +I E
Sbjct: 606 EHYSCIVDLYSRSGKLDDAWSFIANLQEVPEIDVLGCLLSACRDHHRMDIAELVAERIFE 665

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
             P + GY++L+SN+YA A  W++V  +R +++E  +KK  G S
Sbjct: 666 QNPNDPGYHILLSNVYASAGMWSEVTRIRTMIEERSLKKRTGNS 709



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 206/404 (50%), Gaps = 3/404 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  L  + +++   ++       + +   M+  G   D+    T++ AC +V     G  
Sbjct: 228 VRDLASWTAMIGGAVRGGDWLEVMTLLKRMKSEGFRPDSMIFATVIPACGKVKELRTGMA 287

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +HG+A+K G+  D  V NAL+ MY +C  L  A  LF  + ++DV SWST+I G+ +  +
Sbjct: 288 LHGYAVKCGVGDDICVPNALVDMYCKCARLDMAASLFWSIDHKDVFSWSTIIAGHSQNRI 347

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
              ++ +  EM    I+P+   + S++   +++  +  GK IH   +RN  +      +A
Sbjct: 348 YNVSVSLFTEMVASGIKPNSTTIASILPSISELRLLRYGKEIHCFSLRNRLEHS--EFLA 405

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           +ALID Y + G +  A+ +F    +N +V    MI GY+   +    +RL   +++E + 
Sbjct: 406 SALIDFYCRQGYIRDAQIVFEFKPKNDLVVLNSMIRGYVVNKDSESALRLLRALLKEGLR 465

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P  +T++S++  C     L  GK LHAY +R+      ++ NAL DMY KC  +  A  +
Sbjct: 466 PDHVTVVSVLPLCNQPSRLLQGKELHAYAIRHNISSCFSVTNALTDMYCKCGCLEIANKI 525

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F  M  ++ + +N +IS+  +    D+AF LF  MK   V P++VT V LLS C+  G +
Sbjct: 526 FLLMTERNTVTYNTLISSLGKHGHADQAFILFDLMKRDGVSPDKVTFVALLSCCSHGGLI 585

Query: 393 EMGKWLH-TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
           + G   + + +    +  D    + +VD+Y++ G ++ A+   +
Sbjct: 586 DKGLCFYDSMLRDYNIPPDKEHYSCIVDLYSRSGKLDDAWSFIA 629



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 225/474 (47%), Gaps = 9/474 (1%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSEC--GSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           + +H   +  G      ++  L++ Y+    G L  A  +FD MP R+  +W+ +I+G  
Sbjct: 77  RRLHAALLVRGYHRSTVLAAQLVRAYARMRDGGLGHAVRVFDGMPTRNSFAWNAVIKGLV 136

Query: 149 RGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD--E 205
             G   EAL    +M R   +         ++   A + +V+ G+ +   V  +      
Sbjct: 137 DAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGRKVQENVETDIARGIA 196

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
           K  V +  AL+DM++KCG L  A+ +F  +    + SWT MI G +R  +  E + L   
Sbjct: 197 KGNVFVQCALVDMFAKCGCLGEARNMFESMGVRDLASWTAMIGGAVRGGDWLEVMTLLKR 256

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M  E   P  +   ++I  CG V  L+ G  LH Y ++ G    + + NALVDMY KC  
Sbjct: 257 MKSEGFRPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVGDDICVPNALVDMYCKCAR 316

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           +  A +LF  +  KDV  W+ +I+ ++Q    + +  LF  M  S ++PN  T+  +L  
Sbjct: 317 LDMAASLFWSIDHKDVFSWSTIIAGHSQNRIYNVSVSLFTEMVASGIKPNSTTIASILPS 376

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
            +E   L  GK +H +  +  LE    L +AL+D Y + G +  A  +F      D+ + 
Sbjct: 377 ISELRLLRYGKEIHCFSLRNRLEHSEFLASALIDFYCRQGYIRDAQIVFEFKPKNDLVVL 436

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV- 504
           N+M+ GY ++   E AL     + + G++P+ +T + +L  C+    + +GK +    + 
Sbjct: 437 NSMIRGYVVNKDSESALRLLRALLKEGLRPDHVTVVSVLPLCNQPSRLLQGKELHAYAIR 496

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           H +     + +   + D+  + G L+ A+++   M  R N + +  L+++   H
Sbjct: 497 HNISSCFSVTN--ALTDMYCKCGCLEIANKIFLLMTER-NTVTYNTLISSLGKH 547



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 88/188 (46%), Gaps = 9/188 (4%)

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC--GDVNGAY 431
           P E   V LL     A AL   + LH  +  +G     +L   LV  YA+   G +  A 
Sbjct: 57  PREA--VALLLRLQSAPALTEVRRLHAALLVRGYHRSTVLAAQLVRAYARMRDGGLGHAV 114

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSHA 490
           R+F     R+   WNA++ G    G   EAL ++ DM R G V  +  T+  +L AC+  
Sbjct: 115 RVFDGMPTRNSFAWNAVIKGLVDAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAAL 174

Query: 491 GLVTEGKSVFDKMVHGL--GLVPKIEHYGC-MVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           G V +G+ V + +   +  G+        C +VD+  + G L EA  M +SM +R ++  
Sbjct: 175 GEVEQGRKVQENVETDIARGIAKGNVFVQCALVDMFAKCGCLGEARNMFESMGVR-DLAS 233

Query: 548 WGALLAAS 555
           W A++  +
Sbjct: 234 WTAMIGGA 241


>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  342 bits (876), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 195/552 (35%), Positives = 302/552 (54%), Gaps = 55/552 (9%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGS--LVSARY---LFDEMPNRDVVSWSTMIR 145
           K+IH   IK     DA ++ +  ++ + C     +  RY   L  ++   ++  ++ +IR
Sbjct: 54  KQIHASIIKTMPSPDAQLTIS-TRLSALCAQSLPIDPRYALSLLAQLRTPNLPLYNAIIR 112

Query: 146 GYHRGGLPE-EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
           G         E L V ++M    I P    +  ++   A+   V  G+ +H   +     
Sbjct: 113 GLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAI----- 167

Query: 205 EKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
            K+G+A    ++  L+ MY+ C  +  A+++F+   Q  +VSWT MI GY++     EGV
Sbjct: 168 -KMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGV 226

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDM 319
            L                                     YI+RN      + + NALVDM
Sbjct: 227 GL-------------------------------------YIIRNSNVNLDVFVGNALVDM 249

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
           Y KC +   AR +F  M  K+V+ WN++IS  AQ     ++  +F  M+   V+P++VT+
Sbjct: 250 YLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTL 309

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
           V +L+ C   G LE+GKW+H Y+++  +  D  +  ALVDMYAKCG ++ A  +F     
Sbjct: 310 VAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNR 369

Query: 440 RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           +D+  + AM+ G  MHG G +AL  F +M + G++P+ +TF+G+L ACSH GLV EG+  
Sbjct: 370 KDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKY 429

Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK 559
           F+ M     L P++EHYGCMVDLLGRAGL++EA E I++MP+ P+  V GALL A K+H 
Sbjct: 430 FEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHG 489

Query: 560 NPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
              +GE    +I +IEP+  G  VLMSNIY+ ANRW D   +R+ MKE  ++K PG SS+
Sbjct: 490 KVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSI 549

Query: 620 EVNGLVHKFIRG 631
           E++G++H+F +G
Sbjct: 550 ELDGVIHEFQKG 561



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 155/469 (33%), Positives = 227/469 (48%), Gaps = 72/469 (15%)

Query: 36  LTRYNSLVTSYIKNNKPS-SALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           L  YN+++     +N  S   L +Y  M   G   DN+TIP +LKACA+      G+E+H
Sbjct: 104 LPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVH 163

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
           G AIK GL  D YVSN L++MY+ C  + SAR +FD  P RD+VSW+TMI+GY + G   
Sbjct: 164 GQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAR 223

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
           E                       V L+               ++RN  +  L V +  A
Sbjct: 224 EG----------------------VGLY---------------IIRN-SNVNLDVFVGNA 245

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L+DMY KCG+  +A+++F  +   +VVSW  MISG  +  +  E + +F +M    V P 
Sbjct: 246 LVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPD 305

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           ++T+++++  C  +G L+LGKW+HAY+ RN       + NALVDMY KC  I  A  +F 
Sbjct: 306 DVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQ 365

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M  KDV  + A+I   A      KA +LF  M    + P+EVT VG+L+ C+  G +E 
Sbjct: 366 AMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEE 425

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G+    Y E                      D++  Y L  +  +     +  M+   G 
Sbjct: 426 GR---KYFE----------------------DMSTIYNLRPQLEH-----YGCMVDLLGR 455

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            G   EA  F  +M    ++P+      LL AC   G V  G+SV  K+
Sbjct: 456 AGLINEAEEFIRNMP---IEPDAFVLGALLGACKIHGKVELGESVMKKI 501


>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 622

 Score =  342 bits (876), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 170/440 (38%), Positives = 260/440 (59%), Gaps = 31/440 (7%)

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI 282
           G+LAYA+ +F+R+ + +   W  MI GY    E  E + L+  M+  +V  +  T   L+
Sbjct: 66  GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
             C  +  L+  + +HA+I++ GF   +   N+L+++Y K  +I+SAR LFD +  +D +
Sbjct: 126 KACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTV 185

Query: 343 IWNAVISAYAQAHCIDKAFELFIHM-------------------------------KVSK 371
            WN++I  Y +   I+ A+E+F HM                               + + 
Sbjct: 186 SWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAG 245

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           ++ + V +V  L  C + G L+ GKW+H YI+K  +E+D IL   L+DMYAKCGD+  A 
Sbjct: 246 IKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAI 305

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
            +F +   + + +W AM++GY +HG G EAL +F+ M+ +GV+PN +TF G+L ACSHAG
Sbjct: 306 EVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAG 365

Query: 492 LVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
           LV E K +F+ M    G  P IEHYGCMVDLLGRAGLL EA E+I++MP++PN  +WGAL
Sbjct: 366 LVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGAL 425

Query: 552 LAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVK 611
           L A  +H N  +G+     +++++P + G  + +++I+A A  WN  A VRR MKE  V 
Sbjct: 426 LNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVS 485

Query: 612 KEPGFSSVEVNGLVHKFIRG 631
           K PG S + VNG  H+F+ G
Sbjct: 486 KLPGCSVISVNGTAHEFLAG 505



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 194/403 (48%), Gaps = 41/403 (10%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSE--CGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           ++IHG  +K GL  D   ++ L+   +    GSL  AR +FD +   +   W+TMIRGY 
Sbjct: 35  RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYS 94

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
               PEEAL +   M +  +  +      ++   + ++ ++  + IHA +++       G
Sbjct: 95  NSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKM----GFG 150

Query: 209 VAIAT--ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
             I T  +L+++YSK G++  A+ LF++++Q   VSW  MI GY +C EI     +F  M
Sbjct: 151 SEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHM 210

Query: 267 IEENVF--------------PSE-----------------ITILSLIIECGFVGGLQLGK 295
            E N+               P E                 + ++S +  C  +G L  GK
Sbjct: 211 PERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGK 270

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
           W+HAYI ++  E    +   L+DMY KC ++  A  +F  M+ K V +W A+IS YA   
Sbjct: 271 WIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHG 330

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK-QGLEVDVILK 414
              +A E F+ M+ + V PN++T  G+L+ C+ AG +   K L   +E+  G +  +   
Sbjct: 331 RGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHY 390

Query: 415 TALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
             +VD+  + G +  A  L     +  +  +W A++    +HG
Sbjct: 391 GCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHG 433



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 190/401 (47%), Gaps = 61/401 (15%)

Query: 9   NLEQTRQCHAHIIKT-------------------------HFKFSYTNIINPLT-RYNSL 42
           N+E+ RQ H  ++KT                         + +  +  I  P T  +N++
Sbjct: 30  NMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTM 89

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           +  Y  + +P  AL +Y  M  +    + +T P +LKAC+ +      ++IH   IK G 
Sbjct: 90  IRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEETQQIHAHIIKMGF 149

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR------------- 149
             + Y +N+L+ +YS+ G + SAR LFD++  RD VSW++MI GY +             
Sbjct: 150 GSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNH 209

Query: 150 ------------------GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
                              G P+EAL +   M+   I+   VA++S +   AD+  +D G
Sbjct: 210 MPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQG 269

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           K IHA + ++  + ++   +   LIDMY+KCG+L  A ++F ++ +  V  WT MISGY 
Sbjct: 270 KWIHAYIKKH--EIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYA 327

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR-NGFEFSL 310
                 E +  F +M    V P+++T   ++  C   G +   K L   + R +GF+ S+
Sbjct: 328 IHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSI 387

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISA 350
                +VD+ G+   ++ A  L + M  K +  IW A+++A
Sbjct: 388 EHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNA 428


>gi|347954464|gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba nemorosa]
          Length = 829

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 199/659 (30%), Positives = 345/659 (52%), Gaps = 77/659 (11%)

Query: 55  ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
           AL  +  M +NG   DNF +P + KAC  +  +  G+ +HG+  K GL    +V+++L  
Sbjct: 152 ALMGFVEMLENGLFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLAD 211

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           MY +CG L  AR +FDE+P+R VV+W+ ++ GY + G+ +EA+ ++  MR   I P+ V 
Sbjct: 212 MYGKCGLLDDARKVFDEIPDRTVVAWNALMVGYVQNGMNQEAIRLLSAMRNEGIEPTRVT 271

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
           + + +S  A++  ++ GK  HA  + N    +L   + T++++ Y K G + YA+ +F+R
Sbjct: 272 VSTCLSASANMGGIEEGKQSHAIAIVN--GLELDNILGTSILNFYCKVGLIEYAEMIFDR 329

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           + +  VV+W ++ISGY++   + + + +   M   N+    +T+ SL+        L+LG
Sbjct: 330 MIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRRGNLNFDCVTLSSLMSAAARTHNLKLG 389

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD-------------- 340
           K +  Y +R+GF   + +A+  V+MY KC  I  A+ +F+    KD              
Sbjct: 390 KEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKVFNSTVEKDLILWNTLLAAYAEP 449

Query: 341 ---------------------VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT- 378
                                V+ WN+VI +  +   +++A ++F+ M+ S + PN ++ 
Sbjct: 450 GLSGEALRLFYEMQLEGVPPNVITWNSVILSLLRNGQVNEAKDMFLQMQSSGISPNLISW 509

Query: 379 ---MVGL-------------------------------LSLCTEAGALEMGKWLHTYI-E 403
              M GL                               LS C    +L  G+ +H YI  
Sbjct: 510 TTMMNGLVQNGCSEEAIVYLRKMQESGLRLNVFSITVALSACANLASLHFGRSIHGYIIR 569

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
            Q     V ++T+LVDMYAKCGD++ A R+F   +Y ++ ++NAM++ Y ++G  +EA  
Sbjct: 570 NQHHSSSVSIETSLVDMYAKCGDISKAERVFGSKLYSELPLYNAMISAYALYGNVKEATA 629

Query: 464 FFVDM-ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDL 522
            +  + E  G++P+ IT   +L+AC HAG + +   +F  MV    + P +EHYG MVDL
Sbjct: 630 LYRSLDEDVGIEPDNITITNVLSACHHAGDINQAIHIFTDMVSKHAMKPCLEHYGLMVDL 689

Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYN 582
           L  AG  ++A  +I+ MP +P+  +  +LLA+        + E  +  +LE EP+N G  
Sbjct: 690 LASAGETEKALRLIEEMPYKPDARMIQSLLASCNKQHKSELVEYLSRHLLESEPENSGNY 749

Query: 583 VLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL---VHKFIRGGMVNWKS 638
           V +SN+YAV   W++V  +R +MK   +KK+PG S +++ G    VH F+     ++++
Sbjct: 750 VTISNVYAVEGSWDEVGKMREMMKVKGLKKKPGCSWIQIKGEEQGVHVFVANDKTHFRN 808



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 150/529 (28%), Positives = 258/529 (48%), Gaps = 16/529 (3%)

Query: 35  PLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           P   Y   V+S  K  +   AL +   M      +       IL+ C        G++IH
Sbjct: 29  PSISYFHRVSSLCKKGEIREALGLVTEMGSRNVRIGPEIYGEILQGCVYERDLSTGQQIH 88

Query: 95  GFAIKNG--LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
              +KNG     + Y+   L+  Y++C +L  A+ LF ++  R+V SW+ +I    R GL
Sbjct: 89  ARILKNGDFYAKNEYIETKLVIFYAKCDALEVAQLLFSKLRARNVFSWAAIIGVRCRIGL 148

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR----NCKDEKLG 208
            E AL    EM    + P    + ++      +     G+ +H  V +    +C      
Sbjct: 149 VEGALMGFVEMLENGLFPDNFVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDC------ 202

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V +A++L DMY KCG L  A+++F+ +   +VV+W  ++ GY++     E +RL + M  
Sbjct: 203 VFVASSLADMYGKCGLLDDARKVFDEIPDRTVVAWNALMVGYVQNGMNQEAIRLLSAMRN 262

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
           E + P+ +T+ + +     +GG++ GK  HA  + NG E    +  ++++ Y K   I  
Sbjct: 263 EGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIEY 322

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           A  +FD M  KDV+ WN +IS Y Q   ++ A  +   M+   +  + VT+  L+S    
Sbjct: 323 AEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRRGNLNFDCVTLSSLMSAAAR 382

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
              L++GK +  Y  + G   D++L +  V+MYAKCG +  A ++F+  + +D+ +WN +
Sbjct: 383 THNLKLGKEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKVFNSTVEKDLILWNTL 442

Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
           +A Y   G   EAL  F +M+  GV PN IT+  ++ +    G V E K +F +M    G
Sbjct: 443 LAAYAEPGLSGEALRLFYEMQLEGVPPNVITWNSVILSLLRNGQVNEAKDMFLQM-QSSG 501

Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP---LRPNMIVWGALLAA 554
           + P +  +  M++ L + G  +EA   ++ M    LR N+      L+A
Sbjct: 502 ISPNLISWTTMMNGLVQNGCSEEAIVYLRKMQESGLRLNVFSITVALSA 550



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 76/359 (21%), Positives = 146/359 (40%), Gaps = 57/359 (15%)

Query: 33  INP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           I+P L  + +++   ++N     A+     M+++G  ++ F+I   L ACA +   H G+
Sbjct: 502 ISPNLISWTTMMNGLVQNGCSEEAIVYLRKMQESGLRLNVFSITVALSACANLASLHFGR 561

Query: 92  EIHGFAIKNGLDGDAY-VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
            IHG+ I+N     +  +  +L+ MY++CG +  A  +F      ++  ++ MI  Y   
Sbjct: 562 SIHGYIIRNQHHSSSVSIETSLVDMYAKCGDISKAERVFGSKLYSELPLYNAMISAYALY 621

Query: 151 GLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
           G  +EA  + R +   + I P  + + +++S      D++  +AIH              
Sbjct: 622 GNVKEATALYRSLDEDVGIEPDNITITNVLSACHHAGDIN--QAIH-------------- 665

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
                  DM SK               +  +  + +M+       E  + +RL  EM  +
Sbjct: 666 ----IFTDMVSK------------HAMKPCLEHYGLMVDLLASAGETEKALRLIEEMPYK 709

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS---LAMANALV-----DMYG 321
              P    I SL+  C      +L ++L  ++L +  E S   + ++N        D  G
Sbjct: 710 ---PDARMIQSLLASCNKQHKSELVEYLSRHLLESEPENSGNYVTISNVYAVEGSWDEVG 766

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
           K RE+   +    G+K K    W        Q    ++   +F+    +  R NE+  +
Sbjct: 767 KMREMMKVK----GLKKKPGCSW-------IQIKGEEQGVHVFVANDKTHFRNNEIRRI 814


>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 646

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 216/679 (31%), Positives = 347/679 (51%), Gaps = 113/679 (16%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTN--IINPLTRYNSLV-----TSYIKNNKPSSALNIYAF 61
           NL + RQ HA ++  H    + N  ++  LT+   L+     T +I +      + ++ F
Sbjct: 15  NLHRLRQLHAQLV--HHSLHHQNHWVVLLLTQCTRLLAPSSYTCHIFHAATHPDVRVFTF 72

Query: 62  MRKNGSEVD-NFTIPT-----ILKACA--------QVLMTHLGKEIHGF---AIKNGLDG 104
           M K  S++     +P      +L+ C          V+M   G E   F    +K+G D 
Sbjct: 73  MLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKSAGSESMLFLAHVLKSGYDR 132

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           D YV N ++ +Y++ G +  AR LFDEMP+R V  W+ MI GY + G  EEA        
Sbjct: 133 DHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEA-------- 184

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
                          +LF  + D ++ +                V   T +I  ++K GN
Sbjct: 185 --------------STLFHVMGDQEISR---------------NVITWTTMITGHAKKGN 215

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPSEITILSLII 283
           L  A+  F+++ + SVVSW  M+SGY +     E +RLF +M+   NV P E T +++I 
Sbjct: 216 LKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVIS 275

Query: 284 ECGFVGGLQLGKWLHAYILRN-----GFEFSLAMANALVDMYGKCR-------------- 324
            C  +G   L +     I+R      GF  +  +  AL+DM+ KC               
Sbjct: 276 SCSSLGDPCLSE----SIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGV 331

Query: 325 --------------------EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
                               ++ SAR LFD M  +D + WN++I+ Y Q     KA +LF
Sbjct: 332 YKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLF 391

Query: 365 IHMKVSK-VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
             M  S+  +P+EVTMV + S C   G L +G W  + +++  +++ + +  +L+ MY++
Sbjct: 392 EEMISSEDSKPDEVTMVSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSR 451

Query: 424 CGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGL 483
           CG +  A  +F E   RD+  +N +++G+  HG G E++   + M+  G++P+ IT+I +
Sbjct: 452 CGSMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAI 511

Query: 484 LNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           L ACSHAGL+ EG+ +F+ +       P ++HY CM+D+LGRAG L+EA ++I+SMP+ P
Sbjct: 512 LTACSHAGLLGEGQRLFESIK-----FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEP 566

Query: 544 NMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRR 603
           +  ++G+LL A+ +HK   +GE+AA ++ ++EP N G  VL+SNIYA A RW D   VR 
Sbjct: 567 HAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVRD 626

Query: 604 VMKEIRVKKEPGFSSVEVN 622
            M++  VKK  G S +E N
Sbjct: 627 TMRKQGVKKTTGLSWLEHN 645


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 205/604 (33%), Positives = 333/604 (55%), Gaps = 18/604 (2%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLG----KEIH 94
           N L+   +K     +A  I+   R + +  VD + +  +L A A+      G    +E+H
Sbjct: 348 NGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVV--LLSAIAEFSTAEQGLRKGREVH 405

Query: 95  GFAIKNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
              ++ G +     VSN L+ MY++CG++  A  +F  M  RD +SW+T+I    + G  
Sbjct: 406 AHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIITALDQNGYC 465

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           E A+     MR   I PS  A IS +S  A +  +  G+ +H   V+      L  +++ 
Sbjct: 466 EAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVK--WGLYLDTSVSN 523

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE--INEGVRLFAEMIEENV 271
           AL+ MY +CG ++   ++FN ++ + VVSW   I G +  ++  I E V++F+ M++  +
Sbjct: 524 ALVKMYGECGRMSECWEIFNSMSAHDVVSWNS-IMGVMASSQAPITESVQVFSNMMKSGL 582

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
            P+++T ++ +     +  L+LGK +H+ +L++G     A+ NAL+  Y K  ++ S   
Sbjct: 583 VPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVDSCER 642

Query: 332 LFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
           LF  M  + D + WN++IS Y     + +A +    M  S+   +  T   +L+ C    
Sbjct: 643 LFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVA 702

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
           ALE G  +H +  +  LE DV++++ALVDMY+KCG ++ A ++F     ++   WN+M++
Sbjct: 703 ALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMIS 762

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           GY  HG G +AL  F +M+ SG  P+ +TF+ +L+ACSHAGLV  G   F+ M    G++
Sbjct: 763 GYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELM-EDYGIL 821

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS---MGEIA 567
           P+IEHY C++DLLGRAG LD+  E +K MP++PN ++W  +L A +  K+ +   +G  A
Sbjct: 822 PRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVACQQSKHRAKIDLGTEA 881

Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHK 627
           +  +LE+EPQN    VL S  +A   RW D A  R  MK   VKKE G S V +   VH 
Sbjct: 882 SRMLLELEPQNPVNYVLSSKFHAAIGRWEDTAKARAAMKGAAVKKEAGRSWVTLTDGVHT 941

Query: 628 FIRG 631
           FI G
Sbjct: 942 FIAG 945



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 223/446 (50%), Gaps = 29/446 (6%)

Query: 10  LEQTRQCHAHIIKTHFKFSYTNIINPLTR-------------------------YNSLVT 44
           L + R+ HAH+++    +    + N L                           +N+++T
Sbjct: 398 LRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDRISWNTIIT 457

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
           +  +N    +A+  Y  MR+N     NF   + L +CA + +   G+++H  A+K GL  
Sbjct: 458 ALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVKWGLYL 517

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP-EEALEVMREM 163
           D  VSNAL++MY ECG +     +F+ M   DVVSW++++        P  E+++V   M
Sbjct: 518 DTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMASSQAPITESVQVFSNM 577

Query: 164 RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCG 223
               + P++V  ++ ++    ++ ++LGK IH+ ++++   E    A+  AL+  Y+K G
Sbjct: 578 MKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTED--NAVDNALMSCYAKSG 635

Query: 224 NLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI 282
           ++   ++LF+R++ +   +SW  MISGYI    + E +     M+         T   ++
Sbjct: 636 DVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVL 695

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
             C  V  L+ G  +HA+ LR+  E  + + +ALVDMY KC  I  A  +F  M  K+  
Sbjct: 696 NACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEF 755

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
            WN++IS YA+     KA E+F  M+ S   P+ VT V +LS C+ AG +E G      +
Sbjct: 756 SWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELM 815

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVN 428
           E  G+   +   + ++D+  + G+++
Sbjct: 816 EDYGILPRIEHYSCVIDLLGRAGELD 841



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 230/487 (47%), Gaps = 21/487 (4%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           + +H   +K GL  D +++N L+  Y++   L +AR +FD MP R+ VSW+ +I G+   
Sbjct: 85  ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLS 144

Query: 151 GLPEEALEVMREM--RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           GLPE+A  + R M       RP+     S++    D     LG A+    + +  +    
Sbjct: 145 GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSN 204

Query: 209 VAIATALIDMYSKC--GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
             +  ALI MY  C  G    A+++F+      +++W  ++S Y +  +      LF  M
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264

Query: 267 IEEN----VFPSEITILSLIIECGFVGGLQLG--KWLHAYILRNGFEFSLAMANALVDMY 320
             ++    + P+E T  SLI    ++    LG    L   +L++G    L + +ALV  +
Sbjct: 265 QYDDSGIELRPTEHTFGSLITAT-YLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAF 323

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
            +   +  A+ ++ G+K ++ +  N +I+   +    + A E+F+  + S    N  T V
Sbjct: 324 ARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAA-VNVDTYV 382

Query: 381 GLLS----LCTEAGALEMGKWLHTYIEKQG-LEVDVILKTALVDMYAKCGDVNGAYRLFS 435
            LLS      T    L  G+ +H ++ + G +   + +   LV+MYAKCG ++ A R+F 
Sbjct: 383 VLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQ 442

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
               RD   WN ++     +G  E A++ +  M ++ + P+    I  L++C+  GL+  
Sbjct: 443 LMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAA 502

Query: 496 GKSVF-DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           G+ +  D +  GL L   + +   +V + G  G + E  E+  SM    +++ W +++  
Sbjct: 503 GQQLHCDAVKWGLYLDTSVSN--ALVKMYGECGRMSECWEIFNSMSAH-DVVSWNSIMGV 559

Query: 555 SKLHKNP 561
               + P
Sbjct: 560 MASSQAP 566



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/216 (28%), Positives = 108/216 (50%), Gaps = 12/216 (5%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+++ YI N     A++    M  +   +D+ T   +L ACA V     G E+H F +
Sbjct: 656 WNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGL 715

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++ L+ D  V +AL+ MYS+CG +  A  +F  M  ++  SW++MI GY R GL  +ALE
Sbjct: 716 RSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALE 775

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA----TA 214
           +  EM+     P  V  +S++S  +    V+ G      +      E  G+       + 
Sbjct: 776 IFEEMQESGESPDHVTFVSVLSACSHAGLVERGLDYFELM------EDYGILPRIEHYSC 829

Query: 215 LIDMYSKCGNLAYAKQLFNR--LNQNSVVSWTVMIS 248
           +ID+  + G L   ++   R  +  N+++  TV+++
Sbjct: 830 VIDLLGRAGELDKIQEYMKRMPMKPNTLIWRTVLVA 865



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 123/289 (42%), Gaps = 28/289 (9%)

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
           LH  +++ G    L +AN LV+ Y K   + +AR +FDGM  ++ + W  +IS +  +  
Sbjct: 87  LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVSWTCLISGHVLSGL 146

Query: 357 IDKAFELFIHM--KVSKVRPNEVTMVGLLSLCTEAGALEMG--KWLHTYIEKQGLEVDVI 412
            + AF LF  M  +    RP   T   +L  C ++G   +G    +H  + K     +  
Sbjct: 147 PEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTT 206

Query: 413 LKTALVDMYAKC--GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME- 469
           +  AL+ MY  C  G    A R+F     RD+  WNA+M+ Y   G        F  M+ 
Sbjct: 207 VCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAMQY 266

Query: 470 -RSGV--KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDL---- 522
             SG+  +P   TF  L+ A     L +    + D+      L  ++   GC  DL    
Sbjct: 267 DDSGIELRPTEHTFGSLITATY---LSSCSLGLLDQ------LFVRVLKSGCSSDLYVGS 317

Query: 523 -----LGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEI 566
                  R G+LDEA ++   +  R  + + G +    K     +  EI
Sbjct: 318 ALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEI 366


>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
 gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
          Length = 741

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 202/612 (33%), Positives = 331/612 (54%), Gaps = 22/612 (3%)

Query: 28  SYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVL 85
           S+ +++NPL+R+           +P +AL+ +  M  +   V     +   +  A A+V 
Sbjct: 86  SWNSLLNPLSRH-----------QPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVP 134

Query: 86  MTHLGKEIHGFAIK---NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
               G   H FA K   +    + +VS AL+ MY + G++  AR +FD+MP+R+ VSW+ 
Sbjct: 135 SASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAA 194

Query: 143 MIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN 201
           M+ GY  G   EEA E+ R M +   +  +E    +++S  +    + +G  +H  V+  
Sbjct: 195 MVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVL-- 252

Query: 202 CKDEKLG-VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
            KD  +G V++  +L+ MY+K   +  A  +F    + + ++W+ MI+GY +  E +   
Sbjct: 253 -KDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAA 311

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
            +F +M      P+E T + ++     +G L +GK  H  +++ GFE  + + +ALVDMY
Sbjct: 312 TMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMY 371

Query: 321 GKCREIRSARTLFDGMKS-KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
            KC     A+  F  +    DV+IW A+I+ + Q    ++A  L+  M    V P+ +T+
Sbjct: 372 AKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTV 431

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
             +L  C    ALE GK LH  I K G  +   + TAL  MY+KCG++  +  +F     
Sbjct: 432 TSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPD 491

Query: 440 RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           RDI  WN++++G+  HG G +AL  F +M+  G+ P+ ITFI +L ACSH GLV  G   
Sbjct: 492 RDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRGWFY 551

Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK 559
           F  M    GL+PK++HY C+VD+L RAG L EA + I+S+ +     +W  +L A +  +
Sbjct: 552 FRAMSKDYGLIPKLDHYACIVDILSRAGQLKEAKDFIESITIDHGTCLWRIVLGACRSLR 611

Query: 560 NPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           +  +G  A  Q++E+  ++    +L+SNIYA   +WNDV  VR +M+   V K+PG S V
Sbjct: 612 DFDVGAYAGEQLMELGTEDSSAYILLSNIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWV 671

Query: 620 EVNGLVHKFIRG 631
           E+N  V+ F+ G
Sbjct: 672 ELNNQVNVFVVG 683



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 150/497 (30%), Positives = 260/497 (52%), Gaps = 30/497 (6%)

Query: 80  ACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMY-SECGSLVSARY-LFDEMPN--R 135
           A + V     G  +HG+A+K+G      VSN+LI  Y S    L+ A + +F ++P   R
Sbjct: 23  AASSVRTRRAGDALHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLR 82

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMD--IRPSEVAMISMVSLFADVADVDLGKA 193
           DV SW++++    R   P  AL   R M      + P+  +  ++ +  A V     G  
Sbjct: 83  DVASWNSLLNPLSRHQ-PLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAV 141

Query: 194 IH--ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
            H  AC + +       V ++TAL++MY K G ++ A+++F+++   + VSW  M+SGY 
Sbjct: 142 AHAFACKLPSSSGSN-NVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYA 200

Query: 252 --RCNEINEGVRLFAEMIEE-----NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
             +C+E  E   LF  M++E     N F +   + ++ +  G + G+Q    LH  +L++
Sbjct: 201 TGKCSE--EAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQ----LHGLVLKD 254

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
           G    +++ N+LV MY K   + +A  +F   K ++ + W+A+I+ YAQ    D A  +F
Sbjct: 255 GLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMF 314

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC 424
           + M  +   P E T VG+L+  ++ GAL +GK  H  + K G E  V +K+ALVDMYAKC
Sbjct: 315 LQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKC 374

Query: 425 GDVNGAYRLFSEAIY--RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
           G    A   F + +Y   D+ +W AM+ G+  +G  EEAL+ +  M++ GV P+ +T   
Sbjct: 375 GCTGDAKDGFHQ-LYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTS 433

Query: 483 LLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
           +L AC+    +  GK +  +++  G GL   +     +  +  + G L+++  + + MP 
Sbjct: 434 VLRACACLAALEPGKQLHAQILKCGFGLGGSVG--TALSTMYSKCGNLEDSMVVFRRMPD 491

Query: 542 RPNMIVWGALLAASKLH 558
           R ++I W ++++    H
Sbjct: 492 R-DIISWNSIISGFSQH 507


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 196/524 (37%), Positives = 304/524 (58%), Gaps = 20/524 (3%)

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
           N L+  Y + G +  AR +FD+MP R+VVSW++M+RGY + GL +EA     E+ F  + 
Sbjct: 82  NGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEA-----ELLFWRM- 135

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           P +  +   V L   + D  + +A     +   KD    V  +T +I      G L+ A+
Sbjct: 136 PEKNVVSWTVMLGGLIEDGRVDEARRLFDMIPVKD----VVASTNMIGGLCSEGRLSEAR 191

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           ++F+ + Q +VV+WT MISGY   N+++   +LF  M ++N    E+T  +++      G
Sbjct: 192 EIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMPDKN----EVTWTAML-----KG 242

Query: 290 GLQLGKWLHAYILRNGFEFS-LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
             + G+   A  L        +A  N ++  +G   E+  AR +FD MK KD   W+A+I
Sbjct: 243 YTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALI 302

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
             Y +     +A  LF  M+   VRPN  +++ +LS+C    +L+ G+ +H+ + +   +
Sbjct: 303 KIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFD 362

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
           +D+ + + L+ MY KCGD+    R+F     +DI MWN+++AGY  HG GE+AL  F +M
Sbjct: 363 LDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEM 422

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
             SG  P+ ITFIG+L+AC + G V EG  +F+ M     +  K EHY CMVDLLGRAG 
Sbjct: 423 FSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGK 482

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNI 588
           L+EA  +I++MP+  + IVWGALL+A + HKN  + EIAA ++L++EP + G  +L+SN+
Sbjct: 483 LNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNL 542

Query: 589 YAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
           YA  +RW DVA +R+ M+   V K PG S +EV+  VH F  GG
Sbjct: 543 YASQSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGG 586



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 181/361 (50%), Gaps = 28/361 (7%)

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY---HRGGLPEEALEVMR 161
           D   S  +I      G L  AR +FDEMP R+VV+W++MI GY   ++  +  +  EVM 
Sbjct: 170 DVVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMISGYAMNNKVDVARKLFEVMP 229

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADV----DLGKAIHACVVRNCKDEKLGVAIATALID 217
           +        +EV   +M+  +     +    +L KA+    V  C    +G  +      
Sbjct: 230 D-------KNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNGMIMGFGLN----- 277

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
                G +  A+ +F+++ +    +W+ +I  Y R     E + LF+ M  E V P+  +
Sbjct: 278 -----GEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPNFPS 332

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           I+S++  CG +  L  G+ +H+ ++R+ F+  + +++ L+ MY KC ++ + + +FD   
Sbjct: 333 IISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFS 392

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
           SKD+++WN++I+ YAQ    +KA E+F  M  S   P+E+T +G+LS C   G ++ G  
Sbjct: 393 SKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLE 452

Query: 398 LHTYIEKQGLEVDVILK--TALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGM 454
           +   + K   +VD   +    +VD+  + G +N A  L     +  D  +W A+++    
Sbjct: 453 IFESM-KSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLSACRT 511

Query: 455 H 455
           H
Sbjct: 512 H 512



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 173/414 (41%), Gaps = 85/414 (20%)

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
           A ++   I  ++  G +  AR +FD++ ++ V SW+ ++ GY     P EA ++  +M  
Sbjct: 16  AAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQKLFDKM-- 73

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
                 E   IS                                     L+  Y K G +
Sbjct: 74  -----PERNTISW----------------------------------NGLVSGYVKNGMI 94

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
           + A+++F+++ + +VVSWT M+ GY++   I+E   LF  M E+NV    + +  LI + 
Sbjct: 95  SEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNVVSWTVMLGGLIED- 153

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR--SARTLFDGMKSKDVMI 343
              G +   + L   I       S  M   L      C E R   AR +FD M  ++V+ 
Sbjct: 154 ---GRVDEARRLFDMIPVKDVVASTNMIGGL------CSEGRLSEAREIFDEMPQRNVVA 204

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRP--NEVTMVGLLSLCTEAGALEMGKWLHTY 401
           W ++IS YA  + +D A +LF      +V P  NEVT   +L   T +G +         
Sbjct: 205 WTSMISGYAMNNKVDVARKLF------EVMPDKNEVTWTAMLKGYTRSGRIN-------- 250

Query: 402 IEKQGLEVDVILKTALVDMYAKC----------GDVNGAYRLFSEAIYRDICMWNAMMAG 451
                 E   + K   V   A C          G+V  A  +F +   +D   W+A++  
Sbjct: 251 ------EAAELFKAMPVKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKI 304

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           Y   G   EAL  F  M+R GV+PN  + I +L+ C     +  G+ V  ++V 
Sbjct: 305 YERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVR 358



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 2/212 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +++L+  Y +      AL +++ M++ G   +  +I +IL  C  +     G+++H   +
Sbjct: 298 WSALIKIYERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLV 357

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++  D D YVS+ LI MY +CG LV+ + +FD   ++D+V W+++I GY + G  E+ALE
Sbjct: 358 RSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALE 417

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V  EM      P E+  I ++S       V  G  I   +    + ++     A  ++D+
Sbjct: 418 VFHEMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYA-CMVDL 476

Query: 219 YSKCGNLAYAKQLFNRLN-QNSVVSWTVMISG 249
             + G L  A  L   +  +   + W  ++S 
Sbjct: 477 LGRAGKLNEAMNLIENMPVEADAIVWGALLSA 508



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 122/304 (40%), Gaps = 54/304 (17%)

Query: 303 RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
           R+ F  S A+    +  + +  +I  AR +FD ++SK V  WNA+++ Y       +A +
Sbjct: 9   RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQK 68

Query: 363 LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYA 422
           LF  M                                        E + I    LV  Y 
Sbjct: 69  LFDKMP---------------------------------------ERNTISWNGLVSGYV 89

Query: 423 KCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
           K G ++ A ++F +   R++  W +M+ GY   G  +EA + F  M    V    +++  
Sbjct: 90  KNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEAELLFWRMPEKNV----VSWTV 145

Query: 483 LLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
           +L      G V E + +FD +      V  +     M+  L   G L EA E+   MP R
Sbjct: 146 MLGGLIEDGRVDEARRLFDMIP-----VKDVVASTNMIGGLCSEGRLSEAREIFDEMPQR 200

Query: 543 PNMIVWGALLAASKLHKNPSMGEIAATQILEIEP-QNYGYNVLMSNIYAVANRWNDVAGV 601
            N++ W ++++   ++    +    A ++ E+ P +N      M   Y  + R N+ A +
Sbjct: 201 -NVVAWTSMISGYAMNNKVDV----ARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAEL 255

Query: 602 RRVM 605
            + M
Sbjct: 256 FKAM 259


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  342 bits (876), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 188/559 (33%), Positives = 302/559 (54%), Gaps = 16/559 (2%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           M + G  V +     +L  C +       + +HG  +K G   D +V+ +L+  Y  CG+
Sbjct: 69  MLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGA 128

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
              AR LFD+MP ++VV+W+ +I GY       EALEV  EM      PS   + +M++ 
Sbjct: 129 SQDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNA 188

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGV-AIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
            +   + DLG  +H   +   K   L + +I  +L  MY+K G+L  A + F  +   +V
Sbjct: 189 CSASNNADLGSQVHGYTI---KYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNV 245

Query: 241 VSWTVMISGYIRCNEINE-GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
           ++WT MIS         E G+ LF +M+ + V P+E T+ S++  CG    L LGK + A
Sbjct: 246 ITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQVQA 305

Query: 300 YILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA----- 354
           +  + G + ++ + N+ + +Y +  E   A   F+ M    ++ WNA+IS YAQ      
Sbjct: 306 FCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMETAK 365

Query: 355 ---HCIDKAFE---LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
              H   + F+   +F ++K S ++P+  T   +LS+C+   ALE G+ +H    K G  
Sbjct: 366 DDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFL 425

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            DV++ +ALV+MY KCG +  A + F E   R +  W +M++GY  HG  +EA+  F DM
Sbjct: 426 SDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDM 485

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
             +GV+PN ITF+ +L+ACS+AGL  + +  FD M     + P ++HYGCMVD+  R G 
Sbjct: 486 RFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRLGR 545

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNI 588
           LD+A   I+     PN  +W +L+A  + H N  +   AA +++E+ P+     VL+ N+
Sbjct: 546 LDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLLLNM 605

Query: 589 YAVANRWNDVAGVRRVMKE 607
           Y    RW+DVA VR++MK+
Sbjct: 606 YISNERWHDVARVRKLMKQ 624



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 137/512 (26%), Positives = 247/512 (48%), Gaps = 45/512 (8%)

Query: 14  RQCHAHIIKTHFK---FSYTNIINPLTR---------------------YNSLVTSYIKN 49
           R  H H++KT      F  T+++N   R                     + +L+T Y  N
Sbjct: 98  RALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMPEKNVVTWTALITGYTVN 157

Query: 50  NKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVS 109
           ++   AL ++  M + G    ++T+  +L AC+      LG ++HG+ IK        + 
Sbjct: 158 SQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNNADLGSQVHGYTIKYRALSITSIG 217

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG-GLPEEALEVMREMRFMDI 168
           N+L +MY++ GSL SA   F  +P+++V++W+TMI          E  L +  +M    +
Sbjct: 218 NSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISACAEDENYTELGLTLFLDMLMDGV 277

Query: 169 RPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
            P+E  + S++SL     D++LGK + A C    C   +  + +  + + +Y + G    
Sbjct: 278 LPNEFTLTSVMSLCGTRLDLNLGKQVQAFCFKIGC---QTNIPVKNSTMYLYLRKGETDE 334

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEIN-----------EGVRLFAEMIEENVFPSEI 276
           A + F  ++  S+++W  MISGY +  E             + +++F  +    + P   
Sbjct: 335 AMRFFEEMDDVSIITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLF 394

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           T  S++  C  +  L+ G+ +HA  ++ GF   + + +ALV+MY KC  I  A   F  M
Sbjct: 395 TFSSILSVCSSMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEM 454

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             + ++ W ++IS Y+Q     +A +LF  M+ + VRPNE+T V +LS C+ AG  E  +
Sbjct: 455 SIRTLVTWTSMISGYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAE 514

Query: 397 -WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGM 454
            +     E+  +E  V     +VDM+ + G ++ A+       +  +  +W++++AG   
Sbjct: 515 HYFDMMKEEYKIEPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRS 574

Query: 455 HGCGEEALIFFVDMERSGVKPNGI-TFIGLLN 485
           HG  E  L F+       ++P GI T++ LLN
Sbjct: 575 HGNME--LAFYAADRLIELRPKGIETYVLLLN 604


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  341 bits (875), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 191/558 (34%), Positives = 298/558 (53%), Gaps = 40/558 (7%)

Query: 79  KACAQVLMTHLG----KEIHG-FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           +AC  +L  + G     ++H    I   L  D  ++  L++ YS  G    ARY+FD   
Sbjct: 39  EACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSL 98

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
            ++VV ++ MIR Y    L  EAL + + M      P       ++   + + ++ +G  
Sbjct: 99  EKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQ 158

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           +H  +V+   D  L   I  AL+ MY KCG L  A+++ +++    VVSW  M++GY + 
Sbjct: 159 VHDAIVKVGLDTNL--FIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQS 216

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
            + ++ + +  EM   N+     T+ SL                                
Sbjct: 217 GQFDDALEICKEMDSLNLNHDAGTMASL-------------------------------- 244

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
            + V  Y     ++    +F+ M  K+++ WN +I+ Y      ++A  LF+ M+   ++
Sbjct: 245 -SPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMK 303

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           P+ VT+  LL  C +  AL +G+ LH YIEK  L+ +++L+ AL+DMYAKCG +  A  +
Sbjct: 304 PDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDV 363

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F +   RD+  W +MM+ YG  G G +A+  F  M  SG  P+ I F+ +L+ACSH GL+
Sbjct: 364 FDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLL 423

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            +G+  F  M    G+VP+IEH+ CMVDL GRAG ++EA+  IK MP+ PN  VWGALL+
Sbjct: 424 DQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLS 483

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           A ++H    +G +AA  + ++ P+  GY VL+SNIYA A  W DV  VR  MK+I +KK 
Sbjct: 484 ACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKV 543

Query: 614 PGFSSVEVNGLVHKFIRG 631
           PG S+VE+NG VH F+ G
Sbjct: 544 PGISNVELNGQVHTFLAG 561



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 227/441 (51%), Gaps = 42/441 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++ SY+ NN    AL+I+  M       D++T P +LKAC+ +    +G ++H   +
Sbjct: 105 FNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIV 164

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GLD + ++ NAL+ MY +CG L  AR + D+MP RDVVSW++M+ GY + G  ++ALE
Sbjct: 165 KVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALE 224

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + +EM  +++      M S+  +                                     
Sbjct: 225 ICKEMDSLNLNHDAGTMASLSPVVC----------------------------------- 249

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+   N+ Y   +F R+ + +++SW VMI+ Y+  +  NE V LF +M E  + P  +TI
Sbjct: 250 YTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTI 309

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            SL+  CG +  L LG+ LH YI +   + +L + NAL+DMY KC  +  AR +FD M+ 
Sbjct: 310 ASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRL 369

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-W 397
           +DV+ W +++SAY ++     A  LF  M  S   P+ +  V +LS C+  G L+ G+ +
Sbjct: 370 RDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHY 429

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH- 455
                E+ G+   +     +VD++ + G+V  AY    +  +  +  +W A+++   +H 
Sbjct: 430 FRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHS 489

Query: 456 ----GCGEEALIFFVDMERSG 472
               G     L+F +  ++SG
Sbjct: 490 KMDIGLVAADLLFQLAPKQSG 510



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 89/157 (56%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N ++  Y+ N+ P+ A++++  M + G + D  TI ++L AC  +    LG+ +H 
Sbjct: 271 LISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHK 330

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +  K  L  +  + NAL+ MY++CG L  AR +FD+M  RDVVSW++M+  Y R G   +
Sbjct: 331 YIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYD 390

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           A+ +  +M      P  +A +S++S  +    +D G+
Sbjct: 391 AVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR 427


>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 749

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 192/564 (34%), Positives = 296/564 (52%), Gaps = 5/564 (0%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF 129
           D + +   ++AC  V    +G+ +H   I  G     +V+ +L+ MY++ G +  +  +F
Sbjct: 163 DEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVF 222

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           + + NR+ VSW+ MI G+   GL  EA      M   +IRP+    IS+      + DV+
Sbjct: 223 NSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVE 282

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLF--NRLNQNSVVSWTVMI 247
            G+ I+          +  + + TALIDM++KCG +  +  +F  N       + W  MI
Sbjct: 283 KGRYINRIAFE--IGMQSNIHVGTALIDMFAKCGCVTESWSVFVSNFSGCGVNLPWNAMI 340

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           SG+       E + LF  M + N+     T  S +     +  L+  K LH  I ++G  
Sbjct: 341 SGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWKSG-S 399

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
             +++ NAL+D Y KC E+ + R LFD  +  + + W  +++AY+Q+   + A  +F  M
Sbjct: 400 IGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQM 459

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
           +    +PN+VT  G+L+ C    +LE G+ +H+   K G   D  +++ L+DMYAKCG V
Sbjct: 460 REMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSV 519

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             A ++F      D+  W AM++GY  HG  ++AL  F  ME     PN  TF+ LL AC
Sbjct: 520 RDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSATFLCLLFAC 579

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           SH GLV EG   F  M    GLVP+IEHY C+VD+LGR G L EA + I  MP+ P+  V
Sbjct: 580 SHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMKMPIEPDEKV 639

Query: 548 WGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
           W  LL A ++H N  + +IAA ++L   P ++   VL+SN Y  A        VR +MK 
Sbjct: 640 WSTLLGACRVHGNIQLAKIAAQKVLSYNPDDFAALVLLSNTYREAGNIEGGLNVRNMMKS 699

Query: 608 IRVKKEPGFSSVEVNGLVHKFIRG 631
             ++KE G S + + G +HKF  G
Sbjct: 700 QAMRKETGMSWICIGGKIHKFCSG 723



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 231/477 (48%), Gaps = 17/477 (3%)

Query: 90  GKEIHGFAIKNGLDGDAYVS--NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
            K IHGF IK  L   +     N L+  YS+C    SAR +FDE+P + V SW+ ++ G 
Sbjct: 80  AKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQVFDEIPQKSVFSWTVLMVGA 139

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
              G   + ++   E+   DI P E A+ + +     V  + +G+ +HA V+      + 
Sbjct: 140 TENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDSIVVGEMVHAQVITRGFSSR- 198

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
              + T+L+ MY+K G +  + ++FN L   + VSW  MISG++      E    F  M+
Sbjct: 199 -TFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRML 257

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
            E + P+    +S+    G +G ++ G++++      G + ++ +  AL+DM+ KC  + 
Sbjct: 258 GEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVT 317

Query: 328 SARTLF-DGMKSKDV-MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
            + ++F        V + WNA+IS +  +   ++A  LF+ M  + ++ +  T    L+ 
Sbjct: 318 ESWSVFVSNFSGCGVNLPWNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNS 377

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
             +  +LE  K LH  I K G  + V L  AL+D YAKCG+++   +LF      +   W
Sbjct: 378 IADMRSLEYVKQLHGMIWKSG-SIGVSLCNALMDAYAKCGELDAMRKLFDTWEESNQISW 436

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
             ++  Y      E+AL  F  M   G +PN +TF G+L +C+    +  G+      VH
Sbjct: 437 TTLVTAYSQSSEWEDALSVFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQ-----VH 491

Query: 506 GLGLVPKIEHYGC----MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            L          C    ++D+  + G + +A ++ +S+   P++I W A+++    H
Sbjct: 492 SLTCKTGFARDKCVESVLIDMYAKCGSVRDAIKVFESLK-DPDVISWTAMISGYAQH 547



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 201/393 (51%), Gaps = 19/393 (4%)

Query: 171 SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQ 230
           SE ++I ++   AD   +   K+IH  V++    EK    +   L+  YSKC +   A+Q
Sbjct: 60  SETSLIELIRESADERCLKKAKSIHGFVIKFQLIEKSLTVMLNQLVIAYSKCSDFGSARQ 119

Query: 231 LFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGG 290
           +F+ + Q SV SWTV++ G        +G+  F E++  ++ P E  + + I  C  V  
Sbjct: 120 VFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGVDS 179

Query: 291 LQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
           + +G+ +HA ++  GF     +  +L+ MY K   I  +  +F+ +++++ + WNA+IS 
Sbjct: 180 IVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMISG 239

Query: 351 YAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
           +       +A+  F+ M   ++RPN    + +     + G +E G++++    + G++ +
Sbjct: 240 FVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLGDVEKGRYINRIAFEIGMQSN 299

Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC----MWNAMMAGYGMHGCGEEALIFFV 466
           + + TAL+DM+AKCG V  ++ +F        C     WNAM++G+ + G GEEA++ F+
Sbjct: 300 IHVGTALIDMFAKCGCVTESWSVFVSNFSG--CGVNLPWNAMISGFTISGHGEEAMLLFL 357

Query: 467 DMERSGVKPNGITFIGLLNACSHAGLVTEGKSV-FDKMVHGL----GLVPKIEHYGCMVD 521
            M ++ +K +  T+   LN+      + + +S+ + K +HG+    G +  +     ++D
Sbjct: 358 RMCQNNIKRDVYTYCSTLNS------IADMRSLEYVKQLHGMIWKSGSI-GVSLCNALMD 410

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
              + G LD   ++  +     N I W  L+ A
Sbjct: 411 AYAKCGELDAMRKLFDTWE-ESNQISWTTLVTA 442



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 178/374 (47%), Gaps = 12/374 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++++ +  +     A+ ++  M +N  + D +T  + L + A +      K++HG   
Sbjct: 336 WNAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIW 395

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G  G   + NAL+  Y++CG L + R LFD     + +SW+T++  Y +    E+AL 
Sbjct: 396 KSGSIG-VSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALS 454

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA--CVVRNCKDEKLGVAIATALI 216
           V  +MR M  +P++V    +++  A +  ++ G+ +H+  C     +D+     + + LI
Sbjct: 455 VFSQMREMGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDK----CVESVLI 510

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           DMY+KCG++  A ++F  L    V+SWT MISGY +     + + LF +M      P+  
Sbjct: 511 DMYAKCGSVRDAIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKMELVLPNPNSA 570

Query: 277 TILSLIIECGFVGGLQLG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           T L L+  C   G +  G ++ H    R G    +     +VD+ G+   +  A      
Sbjct: 571 TFLCLLFACSHGGLVDEGLRYFHLMEERYGLVPEIEHYACVVDILGRVGRLTEAWKFIMK 630

Query: 336 MK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS-LCTEAGALE 393
           M    D  +W+ ++ A      I  A       KV    P++   + LLS    EAG +E
Sbjct: 631 MPIEPDEKVWSTLLGACRVHGNIQLA--KIAAQKVLSYNPDDFAALVLLSNTYREAGNIE 688

Query: 394 MGKWLHTYIEKQGL 407
            G  +   ++ Q +
Sbjct: 689 GGLNVRNMMKSQAM 702


>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 623

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 188/557 (33%), Positives = 306/557 (54%), Gaps = 20/557 (3%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           ++L++C      H   +I    I NG   + Y++  L+ + +    +  AR LFD++P+ 
Sbjct: 43  SLLQSCKTSKQVH---QIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDP 99

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
           ++  W++M RGY +     E + +  +M+ MDIRP+      ++     +  +  G+ +H
Sbjct: 100 NIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVH 159

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
            C +  C   +    + T LIDMYS  G +  A ++F  + + +VV+WT MI+GYI   +
Sbjct: 160 -CFLIKC-GFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSMINGYILSAD 217

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGG---LQLGKWLHAYILRNGFEFSLAM 312
           +    RLF      ++ P    +L  I+  G++ G   ++  K  H    R+     +  
Sbjct: 218 LVSARRLF------DLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRD-----VMF 266

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM-KVSK 371
            N ++  Y     + +   LF+ M  +++  WNA+I  YA      +    F  M   S 
Sbjct: 267 WNTVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESD 326

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           V PN+ T+V +LS C   GAL++GKW+H Y E  GL+ +V +  AL+DMYAKCG +  A 
Sbjct: 327 VPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAI 386

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
            +F     +D+  WN ++ G  MH  G +AL  F  M+ +G KP+GITFIG+L AC+H G
Sbjct: 387 SVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMG 446

Query: 492 LVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
           LV +G + F  M     ++P+IEHYGCMVD+L RAG L++A   ++ MP+  + ++W  L
Sbjct: 447 LVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGL 506

Query: 552 LAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVK 611
           L A +++KN  + E+A  +++E+EP+N    V++SNIY  A RW DVA ++  M++   K
Sbjct: 507 LGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFK 566

Query: 612 KEPGFSSVEVNGLVHKF 628
           K PG S +EVN  V +F
Sbjct: 567 KLPGCSLIEVNDAVVEF 583



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 214/439 (48%), Gaps = 24/439 (5%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHFKFSYT-----NIINP-LTRYNSLVTSYIKNNKPSSAL 56
           I NGF   E        I  T  + +Y       I +P +  +NS+   Y ++      +
Sbjct: 62  IANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVV 121

Query: 57  NIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMY 116
            ++  M+      + FT P +LK+C ++     G+++H F IK G  G+ +V   LI MY
Sbjct: 122 FLFFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMY 181

Query: 117 SECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMI 176
           S  G++  A  +F EM  R+VV+W++MI GY        + +++   R  D+ P    ++
Sbjct: 182 SAGGTVGDAYKIFCEMFERNVVAWTSMINGYIL------SADLVSARRLFDLAPERDVVL 235

Query: 177 --SMVSLFADVAD-VDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFN 233
              MVS + +  D V+  K  H    R+       V     ++  Y+  GN+   + LF 
Sbjct: 236 WNIMVSGYIEGGDMVEARKLFHEMPNRD-------VMFWNTVLKGYATNGNVEALEGLFE 288

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI-EENVFPSEITILSLIIECGFVGGLQ 292
            + + ++ SW  +I GY       E +  F  M+ E +V P++ T+++++  C  +G L 
Sbjct: 289 EMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALD 348

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
           LGKW+H Y   +G + ++ + NAL+DMY KC  I +A ++F GM +KD++ WN +I   A
Sbjct: 349 LGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLA 408

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDV 411
                  A  LF  MK +  +P+ +T +G+L  CT  G +E G  +  +  +   +   +
Sbjct: 409 MHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQI 468

Query: 412 ILKTALVDMYAKCGDVNGA 430
                +VDM A+ G +  A
Sbjct: 469 EHYGCMVDMLARAGRLEQA 487



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 100/201 (49%), Gaps = 8/201 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFM-RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +N+L+  Y  N      L  +  M  ++    ++ T+ T+L ACA++    LGK +H +A
Sbjct: 298 WNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYA 357

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
             +GL G+ YV NAL+ MY++CG + +A  +F  M  +D++SW+T+I G        +AL
Sbjct: 358 ESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADAL 417

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL---GVAIATA 214
            +  +M+    +P  +  I ++     +  V+ G A      ++  D+ L    +     
Sbjct: 418 NLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFA----YFQSMADDYLIMPQIEHYGC 473

Query: 215 LIDMYSKCGNLAYAKQLFNRL 235
           ++DM ++ G L  A     ++
Sbjct: 474 MVDMLARAGRLEQAMAFVRKM 494



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/214 (21%), Positives = 94/214 (43%), Gaps = 14/214 (6%)

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
           E   + LL  C  +  +     +   I   G + +  +   LV + A    +  A +LF 
Sbjct: 38  EERFISLLQSCKTSKQVHQ---IQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFD 94

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
           +    +I +WN+M  GY       E +  F  M+   ++PN  TF  +L +C     + E
Sbjct: 95  QIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGKINALIE 154

Query: 496 GKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           G+ V   ++  G    P +     ++D+    G + +A+++   M  R N++ W +++  
Sbjct: 155 GEQVHCFLIKCGFRGNPFVGT--TLIDMYSAGGTVGDAYKIFCEMFER-NVVAWTSMING 211

Query: 555 SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNI 588
             L    S   ++A ++ ++ P+    +V++ NI
Sbjct: 212 YIL----SADLVSARRLFDLAPER---DVVLWNI 238


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  341 bits (875), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 185/563 (32%), Positives = 317/563 (56%), Gaps = 11/563 (1%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           +IL+ C +  ++  G ++H + +K+G   +   SN LI MY +C   + A  +FD MP R
Sbjct: 11  SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
           +VVSWS ++ G+   G  + +L +  EM    I P+E    + +     +  ++ G  IH
Sbjct: 71  NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
              ++     ++ V +  +L+DMYSKCG +  A+++F R+   S++SW  MI+G++    
Sbjct: 131 GFCLK--IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188

Query: 256 INEGVRLFAEMIEENV--FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF--SLA 311
            ++ +  F  M E N+   P E T+ SL+  C   G +  GK +H +++R+GF    S  
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248

Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
           +  +LVD+Y KC  + SAR  FD +K K ++ W+++I  YAQ     +A  LF  ++   
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK--QGLEVDVILKTALVDMYAKCGDVNG 429
            + +   +  ++ +  +   L  GK +     K   GLE  V+   ++VDMY KCG V+ 
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVVDMYLKCGLVDE 366

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A + F+E   +D+  W  ++ GYG HG G++++  F +M R  ++P+ + ++ +L+ACSH
Sbjct: 367 AEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSH 426

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
           +G++ EG+ +F K++   G+ P++EHY C+VDLLGRAG L EA  +I +MP++PN+ +W 
Sbjct: 427 SGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQ 486

Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR 609
            LL+  ++H +  +G+     +L I+ +N    V+MSN+Y  A  WN+    R +     
Sbjct: 487 TLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKG 546

Query: 610 VKKEPGFSSVEVNGLVHKFIRGG 632
           +KKE G S VE+   VH F R G
Sbjct: 547 LKKEAGMSWVEIEREVH-FFRSG 568



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 216/422 (51%), Gaps = 4/422 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +++L++ ++ N     +L++++ M + G   + FT  T LKAC  +     G +IHGF +
Sbjct: 75  WSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCL 134

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G +    V N+L+ MYS+CG +  A  +F  + +R ++SW+ MI G+   G   +AL+
Sbjct: 135 KIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALD 194

Query: 159 VMREMRFMDI--RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
               M+  +I  RP E  + S++   +    +  GK IH  +VR+         I  +L+
Sbjct: 195 TFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLV 254

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           D+Y KCG L  A++ F+++ + +++SW+ +I GY +  E  E + LF  + E N      
Sbjct: 255 DLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSF 314

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
            + S+I        L+ GK + A  ++       ++ N++VDMY KC  +  A   F  M
Sbjct: 315 ALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEM 374

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
           + KDV+ W  VI+ Y +     K+  +F  M    + P+EV  + +LS C+ +G ++ G+
Sbjct: 375 QLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGE 434

Query: 397 WLHT-YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGM 454
            L +  +E  G++  V     +VD+  + G +  A  L     I  ++ +W  +++   +
Sbjct: 435 ELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRV 494

Query: 455 HG 456
           HG
Sbjct: 495 HG 496



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 181/365 (49%), Gaps = 15/365 (4%)

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++S++  C   G    G  +H Y+L++G   +L  +N L+DMY KCRE   A  +FD M 
Sbjct: 9   LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            ++V+ W+A++S +     +  +  LF  M    + PNE T    L  C    ALE G  
Sbjct: 69  ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +H +  K G E+ V +  +LVDMY+KCG +N A ++F   + R +  WNAM+AG+   G 
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188

Query: 458 GEEALIFFVDMERSGVK--PNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIE 514
           G +AL  F  M+ + +K  P+  T   LL ACS  G++  GK +   +V  G        
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA--ASKLHKNPSMGEIAATQIL 572
             G +VDL  + G L  A +    +     MI W +L+   A +     +MG     Q L
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVR--RVMKEIRVKKEPGFSSVEVNGLVHKFIR 630
             +  ++     +S+I  V   + D A +R  + M+ + VK   G  +  +N +V  +++
Sbjct: 308 NSQIDSFA----LSSIIGV---FADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLK 360

Query: 631 GGMVN 635
            G+V+
Sbjct: 361 CGLVD 365


>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  341 bits (874), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 185/598 (30%), Positives = 316/598 (52%), Gaps = 16/598 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++++ Y+ +    SA  +Y  M+  G   D +T  +ILK  A      +G+++H   +
Sbjct: 70  WNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIV 129

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G +   Y  +AL+ MY++C  +  A  +F  +P R+ VSW+ +I G+   G  + A  
Sbjct: 130 KMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFW 189

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV----AIATA 214
           ++R M    +R  +     +++L  +     L   +H      CK  K GV     +  A
Sbjct: 190 LLRCMEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLH------CKIIKHGVQFDNTVCNA 243

Query: 215 LIDMYSKCGNLAYAKQLFN-RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
            I  YS+CG+L  A+++F+  +    +V+W  M++ ++  +      +LF +M +    P
Sbjct: 244 TITSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEP 303

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY--GKCREIRSART 331
              T  ++I  C        GK LH  +++ G E  + + NA++ MY       +  A  
Sbjct: 304 DIYTYTTIISACSHKDN---GKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALN 360

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           +F  M+SKD + WN++++ ++Q    + A +LF+HM+ + V  +      +L  C++   
Sbjct: 361 VFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLAT 420

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
           L++G+ +H    K G E +  + ++L+ MY+KCG +  A + F +        WN++M  
Sbjct: 421 LQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFA 480

Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
           Y  HG G+ AL  F  M    VK + ITF+  L ACSH GLV +G+ +   M    G+ P
Sbjct: 481 YAQHGQGDVALGLFFQMRDKKVKMDHITFVAALTACSHIGLVEQGRYLLKSMASDYGISP 540

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
           ++EHY C VDL GRAG LDEA  +I+SMP  P+ +VW  LL A +   +  +    A+ +
Sbjct: 541 RMEHYACAVDLFGRAGYLDEAKALIESMPFDPDAMVWKTLLGACRACGDIELAAQVASHL 600

Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           LE+EP+ +   V++SN+Y    RW++ A + R+M+E +VKK PG+S +EV   VH FI
Sbjct: 601 LELEPEEHCTYVILSNMYGHLKRWDEKACMARLMRERKVKKVPGWSWIEVKNEVHAFI 658



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 131/477 (27%), Positives = 234/477 (49%), Gaps = 26/477 (5%)

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSEC--GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           H   IK G   D Y +N ++  Y+ C  G L  A  LFDEM +RD V+W+TMI GY   G
Sbjct: 22  HCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTMISGYVNSG 81

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
               A E+ + M+   + P      S++   A    +D+G+ +H+ +V+   +E   V  
Sbjct: 82  SLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGYEEH--VYA 139

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
            +AL+DMY+KC  +  A  +F  + + + VSW  +I+G++   + +    L   M EE V
Sbjct: 140 GSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRCMEEEGV 199

Query: 272 FPSEIT---ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
              + T   +L+L+ E  F    +L   LH  I+++G +F   + NA +  Y +C  +  
Sbjct: 200 RLDDGTFSPLLTLLDEKKF---YKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGSLED 256

Query: 329 ARTLFDG-MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           A  +FDG + S+D++ WN++++A+      + AF+LF+ M+     P+  T   ++S C+
Sbjct: 257 AERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACS 316

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY--AKCGDVNGAYRLFSEAIYRDICMW 445
                + GK LH  + K+GLE  V +  A++ MY  +    +  A  +F     +D   W
Sbjct: 317 HK---DNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSW 373

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           N+++ G+   G  E AL  FV M  + V  +   F  +L +CS    +  G+      +H
Sbjct: 374 NSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQ-----IH 428

Query: 506 GLGLVPKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            L +    E        ++ +  + G++++A +  +    + + I W +++ A   H
Sbjct: 429 VLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTA-KDSSITWNSIMFAYAQH 484



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 167/330 (50%), Gaps = 15/330 (4%)

Query: 193 AIHACVVRNCKDEKLG----VAIATALIDMYSKC--GNLAYAKQLFNRLNQNSVVSWTVM 246
           A++   + +C+  KLG    +     ++  Y++C  G L +A  LF+ ++    V+W  M
Sbjct: 14  ALYNIFITHCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFDEMSHRDTVTWNTM 73

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           ISGY+    +     L+  M    + P   T  S++        L +G+ +H+ I++ G+
Sbjct: 74  ISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACACRLDVGQQVHSLIVKMGY 133

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
           E  +   +AL+DMY KC  +R A  +F  +  ++ + WNA+I+ +      D AF L   
Sbjct: 134 EEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIAGFVLEGDHDTAFWLLRC 193

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           M+   VR ++ T   LL+L  E    ++   LH  I K G++ D  +  A +  Y++CG 
Sbjct: 194 MEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATITSYSQCGS 253

Query: 427 VNGAYRLFSEAI-YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
           +  A R+F  A+  RD+  WN+M+A +  H   E A   F+DM++ G +P+  T+  +++
Sbjct: 254 LEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIIS 313

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
           ACSH      GKS     +HGL +   +E 
Sbjct: 314 ACSHKD---NGKS-----LHGLVIKRGLEQ 335



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 184/353 (52%), Gaps = 11/353 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NS++ +++ +++  +A  ++  M++ G E D +T  TI+ AC+       GK +HG
Sbjct: 270 LVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFEPDIYTYTTIISACSH---KDNGKSLHG 326

Query: 96  FAIKNGLDGDAYVSNALIQMY--SECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
             IK GL+    + NA+I MY  S   S+  A  +F  M ++D VSW++++ G+ + G  
Sbjct: 327 LVIKRGLEQLVPICNAVIAMYLESSSNSMEDALNVFHSMESKDRVSWNSILTGFSQTGHS 386

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           E AL++   MRF  +     A  +++   +D+A + LG+ IH   V++  +    V  A+
Sbjct: 387 ENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLATLQLGQQIHVLTVKSGFESNDFV--AS 444

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           +LI MYSKCG +  A++ F +  ++S ++W  ++  Y +  + +  + LF +M ++ V  
Sbjct: 445 SLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMFAYAQHGQGDVALGLFFQMRDKKVKM 504

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTL 332
             IT ++ +  C  +G ++ G++L   +  + G    +      VD++G+   +  A+ L
Sbjct: 505 DHITFVAALTACSHIGLVEQGRYLLKSMASDYGISPRMEHYACAVDLFGRAGYLDEAKAL 564

Query: 333 FDGMK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            + M    D M+W  ++ A      I+ A ++  H+   ++ P E     +LS
Sbjct: 565 IESMPFDPDAMVWKTLLGACRACGDIELAAQVASHLL--ELEPEEHCTYVILS 615


>gi|359478499|ref|XP_003632122.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 577

 Score =  341 bits (874), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 186/473 (39%), Positives = 286/473 (60%), Gaps = 25/473 (5%)

Query: 167 DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKC 222
           D+ PS+ +   ++   A   +  LG+A H      C+  K+G    + + T L+D Y+K 
Sbjct: 5   DVLPSKTSFSLILRSCAISGEAQLGEAFH------CQIMKMGFEYDMILQTGLLDFYAKV 58

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV--FPSEITILS 280
           G+L  AK++F  + +  VV+   MIS   +   + E   LF  M E N   + S IT   
Sbjct: 59  GDLKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNMTERNSCSWNSMITCYC 118

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA-NALVDMYGKCREIRSARTLFDGMKS- 338
                      +LG    A ++ +       ++ NA++D Y K +++ +A+ LF  M S 
Sbjct: 119 -----------KLGDINSARLMFDCNPVKDVVSWNAIIDGYCKSKQLVAAQELFLLMGSA 167

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           ++ + WN +ISAY Q      A  +F  M+   V+P EVTMV LLS C   GAL+MG+W+
Sbjct: 168 RNSVTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWI 227

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H YI  + L++DV+L  AL+DMY KCG +  A  +F     ++I  WN+++ G GM+G G
Sbjct: 228 HGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRG 287

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           EEA+  F+ ME+ G+KP+G+TF+G+L+ CSH+GL++ G+  F +M+   GL P +EHYGC
Sbjct: 288 EEAIAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGC 347

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLLGRAG L EA E+I++MP++PN +V G+LL A ++HK+  +GE    Q+LE++P +
Sbjct: 348 MVDLLGRAGYLKEALELIRAMPMKPNSMVLGSLLRACQIHKDTKLGEQVTQQLLELDPCD 407

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            G  V +SN+YA  +RW+DV   R++M +  V K PG SS+EVN +VH+F+ G
Sbjct: 408 GGNYVFLSNLYASLSRWDDVNTCRKLMIKRGVHKTPGCSSIEVNNIVHEFVAG 460



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 196/398 (49%), Gaps = 16/398 (4%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
           M +N       +   IL++CA      LG+  H   +K G + D  +   L+  Y++ G 
Sbjct: 1   MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           L  A+ +F  MP RDVV+ + MI    + G  EEA  +   M       +  +  SM++ 
Sbjct: 61  LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNM----TERNSCSWNSMITC 116

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRL-NQNSV 240
           +  + D++  + +  C     KD    V    A+ID Y K   L  A++LF  + +  + 
Sbjct: 117 YCKLGDINSARLMFDC--NPVKD----VVSWNAIIDGYCKSKQLVAAQELFLLMGSARNS 170

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           V+W  MIS Y++C E    + +F +M  ENV P+E+T++SL+  C  +G L +G+W+H Y
Sbjct: 171 VTWNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGY 230

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           I     +  + + NAL+DMY KC  + +A  +F G+  K++  WN++I         ++A
Sbjct: 231 IRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEA 290

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVD 419
              FI M+   ++P+ VT VG+LS C+ +G L  G ++    +   GLE  V     +VD
Sbjct: 291 IAAFIVMEKEGIKPDGVTFVGILSGCSHSGLLSAGQRYFSEMLGVYGLEPGVEHYGCMVD 350

Query: 420 MYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           +  + G +  A  L      +     N+M+ G  +  C
Sbjct: 351 LLGRAGYLKEALELIRAMPMKP----NSMVLGSLLRAC 384



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 142/294 (48%), Gaps = 23/294 (7%)

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M+  +V PS+ +   ++  C   G  QLG+  H  I++ GFE+ + +   L+D Y K  +
Sbjct: 1   MLRNDVLPSKTSFSLILRSCAISGEAQLGEAFHCQIMKMGFEYDMILQTGLLDFYAKVGD 60

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           ++ A+ +F GM  +DV+  NA+ISA ++   +++A  LF +M       N  +   +++ 
Sbjct: 61  LKCAKRVFMGMPRRDVVANNAMISALSKHGYVEEARNLFDNM----TERNSCSWNSMITC 116

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICM 444
             + G +   + +      +    DV+   A++D Y K   +  A  LF      R+   
Sbjct: 117 YCKLGDINSARLMFDCNPVK----DVVSWNAIIDGYCKSKQLVAAQELFLLMGSARNSVT 172

Query: 445 WNAMMAGYGMHGCGE--EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
           WN M++ Y    CGE   A+  F  M+   VKP  +T + LL+AC+H G +  G     +
Sbjct: 173 WNTMISAYVQ--CGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMG-----E 225

Query: 503 MVHGLGLVPKIE----HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
            +HG     +++        ++D+  + G L+ A ++   +  R N+  W +++
Sbjct: 226 WIHGYIRTKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLS-RKNIFCWNSII 278



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 78/142 (54%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++++Y++  +  +A++++  M+    +    T+ ++L ACA +    +G+ IHG+  
Sbjct: 173 WNTMISAYVQCGEFGTAISMFQQMQSENVKPTEVTMVSLLSACAHLGALDMGEWIHGYIR 232

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
              L  D  + NALI MY +CG+L +A  +F  +  +++  W+++I G    G  EEA+ 
Sbjct: 233 TKRLKIDVVLGNALIDMYCKCGALEAAIDVFHGLSRKNIFCWNSIIVGLGMNGRGEEAIA 292

Query: 159 VMREMRFMDIRPSEVAMISMVS 180
               M    I+P  V  + ++S
Sbjct: 293 AFIVMEKEGIKPDGVTFVGILS 314


>gi|297815974|ref|XP_002875870.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321708|gb|EFH52129.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 700

 Score =  341 bits (874), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 193/598 (32%), Positives = 308/598 (51%), Gaps = 4/598 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLGKEI 93
           +  + +++  Y+  N    A+ +++ MR     V  D   +  +LKAC Q      G+ +
Sbjct: 65  IVSWTAIIKGYVTANNSDEAMILFSAMRVVDPAVSPDTSVVSVVLKACGQSSNIAYGESL 124

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           H +A+K  L    +V ++L+ MY   G +  +  +F EMP R+ V+W+ +I G    G  
Sbjct: 125 HAYAVKTSLLSSVFVGSSLLDMYKRVGKIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRY 184

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           +E L    EM   +           +   A +  V  GK IH  V+    D    V +A 
Sbjct: 185 KEGLTYFSEMSSSEELSDTFTFAIALKACAGLRQVKYGKQIHTHVIVRGFDAT--VWVAN 242

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           +L  MY++CG +     LF  +++  VVSWT +I  Y R     + V  F +M    V P
Sbjct: 243 SLATMYTECGEMRDGLCLFENMSERDVVSWTSLIVAYNRIGHEEKAVETFIKMRNSQVPP 302

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +E T  ++   C  +  L  G+ LH  +   G   SL+++N+++ MY  C ++ SA  LF
Sbjct: 303 NEQTFATMFSACASLSRLVWGEQLHCNVFSLGLNDSLSVSNSMMKMYSTCGKLDSASVLF 362

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
            GM+ +D++ W+ +I  Y+QA   ++AF+ F  M+ S  +P +  +  LLS+      LE
Sbjct: 363 QGMRCRDIISWSTIIGGYSQAGFGEEAFKYFSWMRQSGPKPTDFALASLLSVSGNMAVLE 422

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            G+ +H      GLE +  +++ L++MY+KCG++  A ++F E    DI    AM+ GY 
Sbjct: 423 GGRQVHALAFCFGLEQNSTVRSTLINMYSKCGNIKEASKIFEETDRDDIVSLTAMINGYA 482

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            HG  +EA+  F    + G  P+ +TFI +L AC+H+G +  G   F+ M     + P  
Sbjct: 483 EHGKSKEAIDLFEKSLKVGFSPDSVTFISVLTACTHSGQLDLGFHYFNLMQEKYNMRPAK 542

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHYGCMVDLL RAG L EA +MI  M  + + +VW  LL A K   +   G  AA +ILE
Sbjct: 543 EHYGCMVDLLCRAGRLSEAEKMIDEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILE 602

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           ++P      V ++NIY+      + A VR+ MK   V KEPG+SS+++   V  F+ G
Sbjct: 603 LDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSG 660



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/434 (27%), Positives = 222/434 (51%), Gaps = 5/434 (1%)

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
            + +N+ ++     G+L  AR +FD+MP+RD+VSW+ +I+GY      +EA+ +   MR 
Sbjct: 34  TFDTNSHLRSLINAGNLRVARQVFDKMPHRDIVSWTAIIKGYVTANNSDEAMILFSAMRV 93

Query: 166 MD--IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCG 223
           +D  + P    +  ++      +++  G+++HA  V+        V + ++L+DMY + G
Sbjct: 94  VDPAVSPDTSVVSVVLKACGQSSNIAYGESLHAYAVKTSLLS--SVFVGSSLLDMYKRVG 151

Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLII 283
            +  + ++F+ +   + V+WT +I+G +      EG+  F+EM          T    + 
Sbjct: 152 KIEKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSSSEELSDTFTFAIALK 211

Query: 284 ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
            C  +  ++ GK +H +++  GF+ ++ +AN+L  MY +C E+R    LF+ M  +DV+ 
Sbjct: 212 ACAGLRQVKYGKQIHTHVIVRGFDATVWVANSLATMYTECGEMRDGLCLFENMSERDVVS 271

Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           W ++I AY +    +KA E FI M+ S+V PNE T   + S C     L  G+ LH  + 
Sbjct: 272 WTSLIVAYNRIGHEEKAVETFIKMRNSQVPPNEQTFATMFSACASLSRLVWGEQLHCNVF 331

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
             GL   + +  +++ MY+ CG ++ A  LF     RDI  W+ ++ GY   G GEEA  
Sbjct: 332 SLGLNDSLSVSNSMMKMYSTCGKLDSASVLFQGMRCRDIISWSTIIGGYSQAGFGEEAFK 391

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL 523
           +F  M +SG KP       LL+   +  ++  G+ V   +    GL         ++++ 
Sbjct: 392 YFSWMRQSGPKPTDFALASLLSVSGNMAVLEGGRQV-HALAFCFGLEQNSTVRSTLINMY 450

Query: 524 GRAGLLDEAHEMIK 537
            + G + EA ++ +
Sbjct: 451 SKCGNIKEASKIFE 464


>gi|15231917|ref|NP_188091.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274207|sp|Q9LUC2.1|PP231_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14730
 gi|9294394|dbj|BAB02404.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642039|gb|AEE75560.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 653

 Score =  341 bits (874), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 194/599 (32%), Positives = 324/599 (54%), Gaps = 18/599 (3%)

Query: 51  KPSSAL-----NIYAFMRKNGSEVDNFTIPT---ILKACAQVLMTHLGKEIHGFAIKNG- 101
           KPSSAL      +   + +N    ++  + T    L+ CAQ      G++IHGF ++ G 
Sbjct: 32  KPSSALASLYSTVSGQIEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGF 91

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
           LD       +L+ MY++CG +  A  +F     RDV  ++ +I G+   G P +A+E  R
Sbjct: 92  LDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYR 150

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
           EMR   I P +    S++   +D  ++   K +H    +   D      + + L+  YSK
Sbjct: 151 EMRANGILPDKYTFPSLLK-GSDAMELSDVKKVHGLAFKLGFDSD--CYVGSGLVTSYSK 207

Query: 222 CGNLAYAKQLFNRL-NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
             ++  A+++F+ L +++  V W  +++GY +     + + +F++M EE V  S  TI S
Sbjct: 208 FMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITS 267

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           ++      G +  G+ +H   ++ G    + ++NAL+DMYGK + +  A ++F+ M  +D
Sbjct: 268 VLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERD 327

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           +  WN+V+  +      D    LF  M  S +RP+ VT+  +L  C    +L  G+ +H 
Sbjct: 328 LFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHG 387

Query: 401 YIEKQGL----EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
           Y+   GL      +  +  +L+DMY KCGD+  A  +F     +D   WN M+ GYG+  
Sbjct: 388 YMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQS 447

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
           CGE AL  F  M R+GVKP+ ITF+GLL ACSH+G + EG++   +M     ++P  +HY
Sbjct: 448 CGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHY 507

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
            C++D+LGRA  L+EA+E+  S P+  N +VW ++L++ +LH N  +  +A  ++ E+EP
Sbjct: 508 ACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEP 567

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
           ++ G  VLMSN+Y  A ++ +V  VR  M++  VKK PG S + +   VH F  G   +
Sbjct: 568 EHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTH 626



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 237/442 (53%), Gaps = 30/442 (6%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+L++ ++ N  P  A+  Y  MR NG   D +T P++LK    + ++ + K++HG A 
Sbjct: 129 YNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHGLAF 187

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR-DVVSWSTMIRGYHRGGLPEEAL 157
           K G D D YV + L+  YS+  S+  A+ +FDE+P+R D V W+ ++ GY +    E+AL
Sbjct: 188 KLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDAL 247

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            V  +MR   +  S   + S++S F    D+D G++IH   V+        + ++ ALID
Sbjct: 248 LVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSD--IVVSNALID 305

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MY K   L  A  +F  +++  + +W  ++  +  C + +  + LF  M+   + P  +T
Sbjct: 306 MYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVT 365

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGF-------EFSLAMANALVDMYGKCREIRSAR 330
           + +++  CG +  L+ G+ +H Y++ +G        EF   + N+L+DMY KC ++R AR
Sbjct: 366 LTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEF---IHNSLMDMYVKCGDLRDAR 422

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +FD M+ KD   WN +I+ Y    C + A ++F  M  + V+P+E+T VGLL  C+ +G
Sbjct: 423 MVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSG 482

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTA-----LVDMYAKCGDVNGAYRLFSEAIYRDIC-- 443
            L  G+     +E     V  IL T+     ++DM  +   +  AY L   AI + IC  
Sbjct: 483 FLNEGRNFLAQMET----VYNILPTSDHYACVIDMLGRADKLEEAYEL---AISKPICDN 535

Query: 444 --MWNAMMAGYGMHGCGEEALI 463
             +W ++++   +HG  + AL+
Sbjct: 536 PVVWRSILSSCRLHGNKDLALV 557



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NS++  +         L ++  M  +G   D  T+ T+L  C ++     G+EIHG
Sbjct: 328 LFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHG 387

Query: 96  FAIKNGL----DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           + I +GL      + ++ N+L+ MY +CG L  AR +FD M  +D  SW+ MI GY    
Sbjct: 388 YMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQS 447

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMV 179
             E AL++   M    ++P E+  + ++
Sbjct: 448 CGELALDMFSCMCRAGVKPDEITFVGLL 475


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  341 bits (874), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 189/597 (31%), Positives = 329/597 (55%), Gaps = 3/597 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  +N+++++Y  +     +L  + +MR   +E ++ T+ ++L  C+ V     G+ IHG
Sbjct: 363 IISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHG 422

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K GLD +  + N L+ +YSE G    A  +F  M  RD++SW++M+  Y + G   +
Sbjct: 423 LVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLD 482

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            L+++ E+  M    + V   S ++  ++   +   K +HA ++     + L   +  AL
Sbjct: 483 GLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFL--IVGNAL 540

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           + MY K G +  AK++   + Q   V+W  +I G+    E NE V+ +  + E+ +  + 
Sbjct: 541 VTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANY 600

Query: 276 ITILSLIIECGFVGGL-QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
           IT++S++  C     L + G  +HA+I+  GFE    + N+L+ MY KC ++ S+  +FD
Sbjct: 601 ITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFD 660

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
           G+ +K  + WNA+++A A   C ++A ++F  M+   V  ++ +  G L+       LE 
Sbjct: 661 GLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEE 720

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G+ LH  + K G E D+ +  A +DMY KCG+++   ++  + I R    WN +++ +  
Sbjct: 721 GQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFAR 780

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           HGC ++A   F +M + G KP+ +TF+ LL+AC+H GLV EG + +D M    G+ P IE
Sbjct: 781 HGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIE 840

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           H  C++DLLGR+G L  A   IK MP+ PN + W +LLAA ++H N  +    A  +LE+
Sbjct: 841 HCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLEL 900

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           +P +    VL SN+ A + +W DV  +R+ M    +KK+P  S V++   VH F  G
Sbjct: 901 DPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMG 957



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 157/545 (28%), Positives = 274/545 (50%), Gaps = 9/545 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + SL+  Y  +  P   LN+Y  MR+ G   +  T  T+  +C  +    LG ++ G
Sbjct: 262 VVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLG 321

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             I+ G +    V+N+LI M+S   S+  A Y+FD M   D++SW+ MI  Y   GL  E
Sbjct: 322 HIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRE 381

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           +L     MR +    +   + S++S+ + V ++  G+ IH  VV+   D    V I   L
Sbjct: 382 SLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSN--VCICNTL 439

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           + +YS+ G    A+ +F  + +  ++SW  M++ Y++  +  +G+++ AE+++     + 
Sbjct: 440 LTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNH 499

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T  S +  C     L   K +HA I+  GF   L + NALV MYGK   +  A+ +   
Sbjct: 500 VTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQT 559

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA-LEM 394
           M   D + WNA+I  +A+    ++A + +  ++   +  N +TMV +L  C+     L+ 
Sbjct: 560 MPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKH 619

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           G  +H +I   G E D  +K +L+ MYAKCGD+N +  +F     +    WNAM+A    
Sbjct: 620 GMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAH 679

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
           HGCGEEAL  F +M   GV  +  +F G L A ++  ++ EG+ +   +V  LG    + 
Sbjct: 680 HGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHG-LVIKLGFESDLH 738

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSM--PLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
                +D+ G+ G   E H+++K +  P+  + + W  L++A   H           ++L
Sbjct: 739 VTNAAMDMYGKCG---EMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEML 795

Query: 573 EIEPQ 577
           ++ P+
Sbjct: 796 KLGPK 800



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 155/509 (30%), Positives = 264/509 (51%), Gaps = 16/509 (3%)

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
           LK  +++     GK +H F I   ++   + +N LI MYS+ G++  ARY+FDEM +R+ 
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV-DLGKAIHA 196
            SWSTM+ GY R GL EEA+ +  +M  + + P+   + S+++  +    + D G  +H 
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 220

Query: 197 CVVRNCKDEKLG-VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
            VV   K   LG V + TAL+  Y   G +  A++LF  +  ++VVSWT ++ GY     
Sbjct: 221 FVV---KTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGN 277

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
             E + ++  M +E V  ++ T  ++   CG +    LG  +  +I++ GFE S+++AN+
Sbjct: 278 PGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANS 337

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
           L+ M+     +  A  +FD M   D++ WNA+ISAYA      ++   F  M+      N
Sbjct: 338 LISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETN 397

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
             T+  LLS+C+    L+ G+ +H  + K GL+ +V +   L+ +Y++ G    A  +F 
Sbjct: 398 STTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQ 457

Query: 436 EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
               RD+  WN+MMA Y   G   + L    ++ + G   N +TF   L ACS+   + E
Sbjct: 458 AMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIE 517

Query: 496 GKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
                 K+VH L +V     +      +V + G+ G++ EA +++++MP +P+ + W AL
Sbjct: 518 -----SKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNAL 571

Query: 552 LAASKLHKNPSMGEIAATQILEIE-PQNY 579
           +     ++ P+    A   I E   P NY
Sbjct: 572 IGGHAENEEPNEAVKAYKLIREKGIPANY 600



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 260/531 (48%), Gaps = 24/531 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV-LMTHLGKEIHGFA 97
           ++++++ Y++      A+ ++  M   G E + F + +++ AC++   M   G ++HGF 
Sbjct: 163 WSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFV 222

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K G+ GD YV  AL+  Y   G + +A+ LF+EMP+ +VVSW++++ GY   G P E L
Sbjct: 223 VKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVL 282

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            V + MR   +  ++    ++ S    + D  LG  +   +++   ++   V++A +LI 
Sbjct: 283 NVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDS--VSVANSLIS 340

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           M+S   ++  A  +F+ +N+  ++SW  MIS Y       E +R F  M   +   +  T
Sbjct: 341 MFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 400

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           + SL+  C  V  L+ G+ +H  +++ G + ++ + N L+ +Y +      A  +F  M 
Sbjct: 401 LSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT 460

Query: 338 SKDVMIWNAVISAYAQ-AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
            +D++ WN++++ Y Q   C+D    L   +++ KV  N VT    L+ C+    L   K
Sbjct: 461 ERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVM-NHVTFASALAACSNPECLIESK 519

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            +H  I   G    +I+  ALV MY K G +  A ++       D   WNA++ G+  + 
Sbjct: 520 IVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENE 579

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
              EA+  +  +   G+  N IT + +L ACS            D + HG+ +   I   
Sbjct: 580 EPNEAVKAYKLIREKGIPANYITMVSVLGACSAPD---------DLLKHGMPIHAHIVLT 630

Query: 517 G---------CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           G          ++ +  + G L+ ++ +   +  + + I W A++AA+  H
Sbjct: 631 GFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNK-SPITWNAMVAANAHH 680


>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
 gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
          Length = 629

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 185/531 (34%), Positives = 298/531 (56%), Gaps = 9/531 (1%)

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           + YV  +L+ MY + G +  AR +FD MP R+  SWSTM+ GY      EEA ++ R M 
Sbjct: 46  NVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLM- 104

Query: 165 FMDIRPSEVAMISMVSLFADVA---DVDLGKAIHACVVRNCKDEKLG-VAIATALIDMYS 220
            ++  PSE +     ++ + V+    + +G+ +H  +V   KD  L  V++  +L+ MY+
Sbjct: 105 -LEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIV---KDGLLDFVSVENSLVTMYA 160

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           K G +  A  +F    + + ++W+ MI+GY +  E +  V +F++M      P+E T + 
Sbjct: 161 KAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVG 220

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           ++     +G L +GK  H  +++ GFE  + + +ALVDMY KC  I  A+  FD +   D
Sbjct: 221 VLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVD 280

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           +++W A++S + Q    ++A  L+  M    + P++ T+   L  C    ALE GK LHT
Sbjct: 281 IVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHT 340

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
            I K GL +   + +AL  MY+KCG++     +F     RD+  WN++++G+  +GCG  
Sbjct: 341 QIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNG 400

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           AL  F +M+  G  P+ ITFI +L ACSH GLV  G   F  M    GL P+++HY CMV
Sbjct: 401 ALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMV 460

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYG 580
           D+L RAG+L EA + I+S+ +     +W  +L A +  ++  +G  A  +++E+   +  
Sbjct: 461 DILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSS 520

Query: 581 YNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             +L+SNIYA   +WNDV  VR +M+   V K+PG S VE+N  VH F+ G
Sbjct: 521 AYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVG 571



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 224/419 (53%), Gaps = 15/419 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKN-GSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           ++++V  Y        A +++  M +   SE   F    +L A +  L   +G+++HG  
Sbjct: 81  WSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLI 140

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +K+GL     V N+L+ MY++ G + +A ++F+    R+ ++WS MI GY + G  + A+
Sbjct: 141 VKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAV 200

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG----VAIAT 213
            +  +M      P+E   + +++  +D+  + +GK  H  +V      KLG    + + +
Sbjct: 201 SMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMV------KLGFEVQIYVKS 254

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMY+KCG +A AK+ F++L +  +V WT M+SG+++  E  E + L+A M +E + P
Sbjct: 255 ALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIP 314

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           S+ TI S +  C  +  L+ GK LH  I++ G      + +AL  MY KC  +    ++F
Sbjct: 315 SKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVF 374

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
             +  +DV+ WN++IS ++Q  C + A +LF  MK+    P+ +T + +L  C+  G ++
Sbjct: 375 RRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVD 434

Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD--ICMWNAMM 449
            G ++     +  GL   +     +VD+ ++ G +  A + F E+I  D   C+W  ++
Sbjct: 435 RGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEA-KDFIESITIDHGTCLWRIVL 492



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 165/326 (50%), Gaps = 5/326 (1%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           F  +   N +T +++++T Y +N +  SA+++++ M   G     FT   +L A + +  
Sbjct: 172 FESSRERNSIT-WSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGA 230

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
             +GK+ HG  +K G +   YV +AL+ MY++CG +  A+  FD++   D+V W+ M+ G
Sbjct: 231 LAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSG 290

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
           + + G  EEAL +   M    I PS+  + S +   A +A ++ GK +H  +V+      
Sbjct: 291 HVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHTQIVK--YGLG 348

Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
           LG  + +AL  MYSKCGNL     +F R+    V++W  +ISG+ +    N  + LF EM
Sbjct: 349 LGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEM 408

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCRE 325
             E   P  IT ++++  C  +G +  G    + + ++ G    L     +VD+  +   
Sbjct: 409 KMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGM 468

Query: 326 IRSARTLFDGMK-SKDVMIWNAVISA 350
           ++ A+   + +       +W  V+ A
Sbjct: 469 LKEAKDFIESITIDHGTCLWRIVLGA 494


>gi|224090799|ref|XP_002309086.1| predicted protein [Populus trichocarpa]
 gi|222855062|gb|EEE92609.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 187/527 (35%), Positives = 298/527 (56%), Gaps = 12/527 (2%)

Query: 115 MYSECGSLVSARYLFDEMPN--RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSE 172
           MY++C  +  A  + +   +  R+V +++ +I G+   GLP++ L    EMR   + P +
Sbjct: 1   MYAKCNQMNQALLVLNRTADYARNVFAYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDK 60

Query: 173 VAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLF 232
                ++    +V +V   K IH  V +   D  L + + ++L+  Y K   +  A++LF
Sbjct: 61  YTFPCLIKGLCEVMEVFQVKKIHGLVRKLGLD--LDMYVGSSLVSSYLKSELMKEARELF 118

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
           + +    VV W  M++GY +    +E + +  EM +E V  S+ T+  ++      G   
Sbjct: 119 DEIPDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFD 178

Query: 293 LGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
            G+ +H ++++ GF+  +++ NAL+DMYGKCR +  A  +F+ M  KD+  WN+++SA  
Sbjct: 179 NGRLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANE 238

Query: 353 QAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD-- 410
                D    LF  M    V+ + VT+  +L  C+   AL  G+ +H Y+   G   D  
Sbjct: 239 LCSDHDGTLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGE 298

Query: 411 ----VILKT--ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIF 464
                 L+T  AL+DMYAKCG +  A  +F     RD   WN M+ GYGMHG G EAL  
Sbjct: 299 SENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEALYM 358

Query: 465 FVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLG 524
           F DM +SG+KPN ITF+G+L ACSHAG +++G     +M    G+VP I+HY C++D+LG
Sbjct: 359 FSDMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDMLG 418

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVL 584
           RAG L+EA+++  +MP++ N +VW ALLAA +L+ N  + E+AA ++ E+ P + G  VL
Sbjct: 419 RAGQLEEAYKLAVTMPIQTNPVVWRALLAACQLYGNVDLAEVAAQKVFELNPAHCGNYVL 478

Query: 585 MSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           MSN Y  A R+ +V  +R  M++  VKK PG S +E+   ++ FI G
Sbjct: 479 MSNAYVAAGRYQEVLDIRHTMRQQDVKKTPGCSWIELKNGMNTFING 525



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 140/428 (32%), Positives = 232/428 (54%), Gaps = 12/428 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+L++ ++ N  P   L  Y  MR+ G   D +T P ++K   +V+     K+IHG   
Sbjct: 28  YNALISGFVLNGLPQDGLGAYEEMRQAGVLPDKYTFPCLIKGLCEVMEVFQVKKIHGLVR 87

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GLD D YV ++L+  Y +   +  AR LFDE+P+RDVV W++M+ GY + G  +EAL 
Sbjct: 88  KLGLDLDMYVGSSLVSSYLKSELMKEARELFDEIPDRDVVLWNSMVNGYAQIGRFDEALG 147

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V REM    +  S+  +  ++S+FA   D D G+ +H  +++   D    V++  ALIDM
Sbjct: 148 VCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNGRLVHGFMIKMGFDS--CVSVCNALIDM 205

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y KC  +  A ++F  +N+  + SW  ++S    C++ +  +RLF  M+ + V    +TI
Sbjct: 206 YGKCRCVVDALEIFETMNEKDIFSWNSILSANELCSDHDGTLRLFDRMLGDGVQLDLVTI 265

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGF--------EFSLAMANALVDMYGKCREIRSAR 330
            +++  C  +  L  G+ +H Y++ NGF         ++L   NAL+DMY KC  +R A 
Sbjct: 266 TTILPACSHLAALVHGREIHGYMIVNGFVKDGESENMYNLQTINALMDMYAKCGSMRDAG 325

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +F  M ++D   WN +I  Y      ++A  +F  M  S ++PNE+T VG+L  C+ AG
Sbjct: 326 MVFYNMSNRDTASWNIMIMGYGMHGYGNEALYMFSDMCKSGLKPNEITFVGVLLACSHAG 385

Query: 391 ALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL-FSEAIYRDICMWNAM 448
            +  G K+L     K G+   +   T ++DM  + G +  AY+L  +  I  +  +W A+
Sbjct: 386 FISQGIKFLGEMELKHGVVPTIQHYTCVIDMLGRAGQLEEAYKLAVTMPIQTNPVVWRAL 445

Query: 449 MAGYGMHG 456
           +A   ++G
Sbjct: 446 LAACQLYG 453


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 190/547 (34%), Positives = 307/547 (56%), Gaps = 23/547 (4%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSE--CGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           ++H  +IK        VS+ L+ +Y++    +L  A  LFD +    +VSW+ +I+ Y  
Sbjct: 33  QLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIE 92

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
                +A+ +  ++   D  P    +  ++   A +  +  GK IH  V+      K+G 
Sbjct: 93  NQRSNDAIALFCKL-LCDFVPDSFTLPCVLKGCARLGALQEGKQIHGLVL------KIGF 145

Query: 210 AIA----TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
            +     ++L+ MYSKCG +   +++F+R+    VVSW  +I GY RC EI   + +F E
Sbjct: 146 GVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEE 205

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI-LRNGFEFSLAMANALVDMYGKCR 324
           M E++ F   I I  L       G L+  + +   + +RN   +     NA+++ Y K  
Sbjct: 206 MPEKDSFSWTILIDGL----SKSGKLEAARDVFDRMPIRNSVSW-----NAMINGYMKAG 256

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
           +  +A+ LFD M  + ++ WN++I+ Y +     KA +LF  M    + PN  T++G +S
Sbjct: 257 DSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVS 316

Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
             +   +L  G+W+H+YI K G + D +L T L++MY+KCG V  A R+F     + +  
Sbjct: 317 AASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGH 376

Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           W +++ G GMHG  E+ L  F +M R+G+KP+ ITFIG+LNACSHAG   +    F  M 
Sbjct: 377 WTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMT 436

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
           +  G+ P IEHYGC++D+L RAG L+EA + I+ MP++ N ++W +LL+ S+ H N  MG
Sbjct: 437 YDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHGNIRMG 496

Query: 565 EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
           E AA  ++++ P   G  V++SN+YA A  W  V  VR +MK+  +KK+PG SS+E  G 
Sbjct: 497 EYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKGMKKDPGCSSIEHQGS 556

Query: 625 VHKFIRG 631
           +H+FI G
Sbjct: 557 IHEFIVG 563



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 228/440 (51%), Gaps = 20/440 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N L+  YI+N + + A+ ++  +  +    D+FT+P +LK CA++     GK+IHG
Sbjct: 80  LVSWNLLIKCYIENQRSNDAIALFCKLLCDFVP-DSFTLPCVLKGCARLGALQEGKQIHG 138

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K G   D +V ++L+ MYS+CG +   R +FD M ++DVVSW+++I GY R G  E 
Sbjct: 139 LVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGYARCGEIEL 198

Query: 156 ALEVMREMRFMDIRPSEVAM--ISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           ALE+  EM   D     + +  +S         DV     I   V  N            
Sbjct: 199 ALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWN------------ 246

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           A+I+ Y K G+   AK+LF+++ + S+V+W  MI+GY R  +  + ++LF  M+ E++ P
Sbjct: 247 AMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISP 306

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +  TIL  +     +  L  G+W+H+YI+++GF+    +   L++MY KC  ++SA  +F
Sbjct: 307 NYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVF 366

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG-AL 392
             +  K +  W +VI        +++  ELF  M  + ++P+ +T +G+L+ C+ AG A 
Sbjct: 367 RSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAE 426

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAG 451
           +  ++        G++  +     L+D+  + G +  A        I  +  +W ++++G
Sbjct: 427 DAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSG 486

Query: 452 YGMHG---CGEEALIFFVDM 468
              HG    GE A    +D+
Sbjct: 487 SRKHGNIRMGEYAAQHLIDL 506


>gi|326524926|dbj|BAK04399.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 584

 Score =  341 bits (874), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 195/540 (36%), Positives = 295/540 (54%), Gaps = 21/540 (3%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           IH  A+  G+  +   +  L+   + C SL  AR +FD  P RD   W+T++R +     
Sbjct: 42  IHARAVLLGVAANPAFATRLLAAAAPC-SLAYARRVFDAAPRRDAYMWNTLLRAHAHAQA 100

Query: 153 PEE-----ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
           P       AL++ + MR   + P       ++   A      LG+A H   VR    E  
Sbjct: 101 PAGSTAGGALQLYKRMRAAGVAPDCYTYPIVLPACAAARAPRLGRAAHGDAVRFALAED- 159

Query: 208 GVAIATALIDMYSKCGNLAYAKQLF---NRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
           G  + +ALI MY + G++A A+Q+F     +   +VVSWT M++GY +     + V +F 
Sbjct: 160 GF-VHSALIAMYCQEGDVADAEQVFLAAAAVGARTVVSWTAMVAGYAQNCLFGQAVTVFG 218

Query: 265 EMIEENVFPSEITILSLII-----ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
            M+ + + P+EIT++S +      EC     L  G+ +H ++++ GF+ +L + NAL+ M
Sbjct: 219 AMVAQGMLPNEITLISFLPCLQGQEC-----LAAGEMVHGFVVKLGFDANLPLVNALIAM 273

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
           YGKC  I +A+ LFDGM +  V+ WN +++ Y Q     +A + F  M   KV  + VT+
Sbjct: 274 YGKCGSIAAAKELFDGMAAHTVVSWNTMVAMYEQNGDGVRAIKFFHRMLSEKVGFDAVTL 333

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
           V +LS CT  GALE GKW+H     +GL+ D  +   LVDMYAKCG++  A + F     
Sbjct: 334 VSVLSACTRQGALETGKWVHELARSRGLDTDARIGNVLVDMYAKCGEIAYARQAFDGLRE 393

Query: 440 RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
             +  W+AM++ Y  HG  EEAL  F  M+  GVKPN  T   +L AC H+GLV EG ++
Sbjct: 394 PGVVSWSAMISAYANHGEPEEALNLFSAMKDQGVKPNSFTLTAVLVACGHSGLVDEGLAI 453

Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK 559
           F+ +V    + P +E+Y CMVD+LGRAG L EA+E+I+ M ++P+  +WGA L   +LH 
Sbjct: 454 FNSIVRDYHISPTLENYACMVDMLGRAGRLVEAYEIIRGMSMQPDKCIWGAFLGGCRLHG 513

Query: 560 NPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           N  + E  A  + +    +  + VLM+N+Y  A    D    RR MKE+ +KK  G S V
Sbjct: 514 NLELAEFVAKDLFQSGSNDVTFYVLMANMYFEAGMLEDAERTRRAMKEMELKKTAGHSLV 573



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 151/477 (31%), Positives = 241/477 (50%), Gaps = 17/477 (3%)

Query: 39  YNSLVTSYIKNNKPSS-----ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
           +N+L+ ++     P+      AL +Y  MR  G   D +T P +L ACA      LG+  
Sbjct: 88  WNTLLRAHAHAQAPAGSTAGGALQLYKRMRAAGVAPDCYTYPIVLPACAAARAPRLGRAA 147

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF---DEMPNRDVVSWSTMIRGYHRG 150
           HG A++  L  D +V +ALI MY + G +  A  +F     +  R VVSW+ M+ GY + 
Sbjct: 148 HGDAVRFALAEDGFVHSALIAMYCQEGDVADAEQVFLAAAAVGARTVVSWTAMVAGYAQN 207

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
            L  +A+ V   M    + P+E+ +IS +        +  G+ +H  VV+   D  L   
Sbjct: 208 CLFGQAVTVFGAMVAQGMLPNEITLISFLPCLQGQECLAAGEMVHGFVVKLGFDANL--P 265

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           +  ALI MY KCG++A AK+LF+ +  ++VVSW  M++ Y +  +    ++ F  M+ E 
Sbjct: 266 LVNALIAMYGKCGSIAAAKELFDGMAAHTVVSWNTMVAMYEQNGDGVRAIKFFHRMLSEK 325

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           V    +T++S++  C   G L+ GKW+H      G +    + N LVDMY KC EI  AR
Sbjct: 326 VGFDAVTLVSVLSACTRQGALETGKWVHELARSRGLDTDARIGNVLVDMYAKCGEIAYAR 385

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
             FDG++   V+ W+A+ISAYA     ++A  LF  MK   V+PN  T+  +L  C  +G
Sbjct: 386 QAFDGLREPGVVSWSAMISAYANHGEPEEALNLFSAMKDQGVKPNSFTLTAVLVACGHSG 445

Query: 391 ALEMGKWLHTYIEKQGLEVDVILK--TALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNA 447
            ++ G  +   I +    +   L+    +VDM  + G +  AY +    ++  D C+W A
Sbjct: 446 LVDEGLAIFNSIVRD-YHISPTLENYACMVDMLGRAGRLVEAYEIIRGMSMQPDKCIWGA 504

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL-NACSHAGLVTEGKSVFDKM 503
            + G  +HG  E A     D+ +SG   N +TF  L+ N    AG++ + +     M
Sbjct: 505 FLGGCRLHGNLELAEFVAKDLFQSG--SNDVTFYVLMANMYFEAGMLEDAERTRRAM 559


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  340 bits (873), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 207/624 (33%), Positives = 327/624 (52%), Gaps = 22/624 (3%)

Query: 19  HIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTIL 78
           H+      F     +  L  + ++     +N     AL +   M ++G   + FT+    
Sbjct: 94  HVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGLRPNAFTLCAAA 153

Query: 79  KAC-AQVLMTHLGKEIHGFAIKNGLDG-DAYVSNALIQMYSECGSLVSARYLFDEMPNRD 136
            AC    L    G  + GFAIK G  G D  V  ALI M++  G LV+AR +F+ +  R 
Sbjct: 154 HACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERT 213

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           VV W+ MI  Y +GG   +A+E+   M      P    M SMVS  A+     LG+ +H+
Sbjct: 214 VVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHS 273

Query: 197 CVVRNCKDEKLGV----AIATALIDMYSKCG---NLAYAKQLFNRLNQNSVVSWTVMISG 249
            V+R      LG+     ++  L+DMY+K     ++  A+++F R+  ++V+SWT +ISG
Sbjct: 274 LVLR------LGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISG 327

Query: 250 YIRCN-EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
           Y++C  + N  V L  EM+ E++ P+ +T  SL+  C  +     G+ +HA +++     
Sbjct: 328 YVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGN 387

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
              + NALV MY +   +  AR  FD +  ++++  ++ I    +++    +      ++
Sbjct: 388 VNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGRSNASWSS-----QIE 442

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
              V  +  T   LLS     G    G+ LH    K G E D  +  +LV MY++CG ++
Sbjct: 443 SMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLD 502

Query: 429 GAYRLFSE-AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
            A R F E     ++  W ++++    HG  E AL  F DM  SGVKPN +T+I +L+AC
Sbjct: 503 DACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSAC 562

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           SH GLV EGK  F  M     L+P++EHY CMVDLL R+GL+ EA E I  MP + + +V
Sbjct: 563 SHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSGLVQEALEFINEMPCKADALV 622

Query: 548 WGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
           W  LL A + ++N  +GEIAA  ++++EPQ+    VL+SN+YA    W++VA +R +M+ 
Sbjct: 623 WKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSNLYAHGGLWDEVARIRSLMRH 682

Query: 608 IRVKKEPGFSSVEVNGLVHKFIRG 631
             + KE G S + V   +H+F  G
Sbjct: 683 RNLSKETGLSWMHVGNTIHEFRAG 706



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 149/495 (30%), Positives = 236/495 (47%), Gaps = 50/495 (10%)

Query: 89  LGKEIHGFAIKNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMPN-RDVVSWSTMIRG 146
           LG+ +H   +    LD DA V+N+L+ MYS+CG + +AR +FD M   RD+VSW+ M   
Sbjct: 61  LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC----VVRNC 202
             R G  +EAL ++ EM    +RP+   + +               A HAC    + R+ 
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCA---------------AAHACFPGELFRSS 165

Query: 203 KDEKLGVAIAT-----------ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
               LG AI T           ALIDM+++ G+L  A+++FN L + +VV WT+MI+ Y+
Sbjct: 166 GGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYV 225

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +     + V LF  M+E+   P   T+ S++  C   G   LG+ LH+ +LR G      
Sbjct: 226 QGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTC 285

Query: 312 MANALVDMYGKC---REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID-KAFELFIHM 367
           ++  LVDMY K    + +  AR +F  M + +VM W A+IS Y Q    +  A EL   M
Sbjct: 286 VSCGLVDMYTKLQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEM 345

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
               + PN +T   LL  C      + G+ +H  + K  +    ++  ALV MYA+ G +
Sbjct: 346 LNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCM 405

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             A + F +   R++   ++ +   G       + I  +D     V  +  TF  LL+A 
Sbjct: 406 EEARKAFDQLYERNLLSTSSDIGETGRSNASWSSQIESMD-----VGVSTFTFASLLSAA 460

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRP 543
           +  GL T+G+      +H L +    E        +V +  R G LD+A      M    
Sbjct: 461 ATVGLPTKGQQ-----LHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDH 515

Query: 544 NMIVWGALLAASKLH 558
           N+I W ++++A   H
Sbjct: 516 NVISWTSIISALAKH 530



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 198/415 (47%), Gaps = 44/415 (10%)

Query: 190 LGKAIHACVVRNCKDEKLGVA--IATALIDMYSKCGNLAYAKQLFNRLNQ-NSVVSWTVM 246
           LG+A+H    R    E L     +A +L+ MYSKCG++  A+++F+ +     +VSWT M
Sbjct: 61  LGRALHR---RLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAM 117

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL--QLGKWLHAYILRN 304
                R     E + L  EM+E  + P+  T+ +    C F G L    G  +  + ++ 
Sbjct: 118 AFCLTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHAC-FPGELFRSSGGTVLGFAIKT 176

Query: 305 GF-EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
           GF    +++  AL+DM+ +  ++ +AR +F+G+  + V++W  +I+ Y Q  C  KA EL
Sbjct: 177 GFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVEL 236

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAK 423
           F+ M      P+  TM  ++S C E G+  +G+ LH+ + + GL  D  +   LVDMY K
Sbjct: 237 FLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTK 296

Query: 424 C---GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE--ALIFFVDMERSGVKPNGI 478
                 +  A ++F      ++  W A+++GY   G G+E  A+    +M    ++PN +
Sbjct: 297 LQMEQSMECARKVFKRMPTHNVMSWTALISGYVQCG-GQENNAVELLCEMLNESIEPNHL 355

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKM---------VHGLGLVPKIEHYGCM------VDLL 523
           T+  LL AC++      G+ +  ++         V G  LV      GCM       D L
Sbjct: 356 TYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQL 415

Query: 524 GRAGLLDEAHEM-------------IKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
               LL  + ++             I+SM +  +   + +LL+A+     P+ G+
Sbjct: 416 YERNLLSTSSDIGETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQ 470



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 166/353 (47%), Gaps = 23/353 (6%)

Query: 293 LGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTLFDGMKS-KDVMIWNAVISA 350
           LG+ LH  +L     +    +AN+L+ MY KC  +R+AR +FDGM+  +D++ W A+   
Sbjct: 61  LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120

Query: 351 YAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM--GKWLHTYIEKQGLE 408
             +     +A  L   M  S +RPN  T+      C          G  L   I+     
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWG 180

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            DV +  AL+DM+A+ GD+  A ++F+  + R + +W  M+  Y   GC  +A+  F+ M
Sbjct: 181 TDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGM 240

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
              G +P+G T   +++AC+  G    G+ +   +V  LGLV        +VD+  +  +
Sbjct: 241 LEDGFEPDGYTMSSMVSACAEQGSAGLGQQLH-SLVLRLGLVSDTCVSCGLVDMYTKLQM 299

Query: 529 ---LDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL------EIEPQNY 579
              ++ A ++ K MP   N++ W AL++    +      E  A ++L       IEP + 
Sbjct: 300 EQSMECARKVFKRMPTH-NVMSWTALISG---YVQCGGQENNAVELLCEMLNESIEPNHL 355

Query: 580 GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
            Y+ L+    A AN  +  +G R++   + +K   G  +V  N LV  +   G
Sbjct: 356 TYSSLLK---ACANLSDQDSG-RQIHARV-MKTSIGNVNVVGNALVSMYAESG 403


>gi|147779768|emb|CAN71727.1| hypothetical protein VITISV_003014 [Vitis vinifera]
          Length = 1167

 Score =  340 bits (873), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 200/621 (32%), Positives = 342/621 (55%), Gaps = 27/621 (4%)

Query: 9    NLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSE 68
            N    +  HAH++K           + L+   +L++ Y K    +SA  I+  M +  S 
Sbjct: 562  NFWXGKSLHAHVMKYRLD-------SQLSVATALLSMYAKLGDXNSAXFIFYQMPRKTSY 614

Query: 69   VDN----FTIPTILKACAQV-LMTHLGKEIHGFAIKNGLDGDAY--VSNALIQMYSECGS 121
             D+    + I ++ +    V L+ HL       AIK G + D+   +SNAL+  YS+CG 
Sbjct: 615  RDSMISGYGIMSMGRPFFWVRLLMHL-------AIKTGKEFDSXLNISNALLAFYSDCGK 667

Query: 122  LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
            L S+  LF +MP R+ +SW+T+I G    G  ++A+ ++ +M+   +    V +IS++ +
Sbjct: 668  LSSSFKLFQKMPLRNAISWNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPI 727

Query: 182  FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
                 ++  G  +H   ++        V++  ALI MY  CG++   K LF  +   S+V
Sbjct: 728  CRVXENLIQGMTLHGYAIKT--GFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIV 785

Query: 242  SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
            SW  +I+GY      NE +  F +MI E   P+ +T+L+L+  C     L  GK +HA+ 
Sbjct: 786  SWNALITGYRFHYLQNEVMASFCQMIXEGQKPNYVTLLNLLPSCX---TLLQGKSIHAFA 842

Query: 302  LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
            +R G      +  +L+ MY +   I S   LF+    +D+ +WNA++S Y Q     ++ 
Sbjct: 843  VRTGVIVETPIITSLISMYARFENINSFIFLFEMGGKEDIALWNAIMSVYVQTKNAKESV 902

Query: 362  ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
              F  +  ++V P+ +T + L+S C +  +L +   +  Y+ ++G +  +++  AL+D++
Sbjct: 903  TFFCELLHARVEPDYITFLSLISACVQLSSLNLSNSVMAYVIQKGFDKHIVISNALIDLF 962

Query: 422  AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
            A+CG+++ A ++F     +D   W+ M+ GYG+HG  E AL     M  SG+KP+GIT+ 
Sbjct: 963  ARCGNISIAKKIFEGLSSKDAVSWSTMINGYGLHGDSEAALALLSQMRLSGMKPDGITYA 1022

Query: 482  GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
             +L+ACSH G + +G  +F+ MV   G+  ++EHY CMVDLLGR G L+EA++ ++ +P 
Sbjct: 1023 SVLSACSHGGFIDQGWMIFNSMVEE-GVPRRMEHYACMVDLLGRTGQLNEAYDFVEKLPC 1081

Query: 542  RPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGV 601
            +P++ +  +LL A  +H N  +GE   + + E++P+N G  V++ NIYA A RW D   V
Sbjct: 1082 KPSVSLLESLLXACIIHGNVKLGEKICSLLFELDPKNSGSYVMLYNIYAAAGRWMDANRV 1141

Query: 602  RRVMKEIRVKKEPGFSSVEVN 622
            R  M+E +++K PGFS VE N
Sbjct: 1142 RSDMEERQLRKIPGFSLVEGN 1162



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 147/516 (28%), Positives = 243/516 (47%), Gaps = 79/516 (15%)

Query: 56  LNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQM 115
           L +Y   R  G   D+FT P ++KAC+ +    + + +H   ++   + +  +  AL+  
Sbjct: 330 LCVYLKCRVLGCPSDDFTFPFVIKACSALGAVWIAEGVHCIVLRTAFEENLVIQTALVDF 389

Query: 116 YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAM 175
           Y++ G +V AR + D++   D+V+W+ +I GY   G  +E  EV+R++  M ++P+    
Sbjct: 390 YAKTGRMVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQILEMGLKPNVSTF 449

Query: 176 ISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALIDMYSKCGNLAYAKQLFN 233
            S++ L   +  +D+GK+IH  VV++    DE L      ALI MY+  GNL  A+ LF+
Sbjct: 450 ASIIPLCTRMKCLDIGKSIHGFVVKSGFSSDEFL----TPALISMYAGGGNLFIARDLFD 505

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQL 293
              + +VV W  MIS Y +  + +E  ++F +M++ N+ P+ +T +S+I  C        
Sbjct: 506 SAAEKNVVIWNSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWX 565

Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK----DVMI------ 343
           GK LHA++++   +  L++A AL+ MY K  +  SA  +F  M  K    D MI      
Sbjct: 566 GKSLHAHVMKYRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMPRKTSYRDSMISGYGIM 625

Query: 344 -------W----------------------NAVISAYAQAHCIDKAFELF---------- 364
                  W                      NA+++ Y+    +  +F+LF          
Sbjct: 626 SMGRPFFWVRLLMHLAIKTGKEFDSXLNISNALLAFYSDCGKLSSSFKLFQKMPLRNAIS 685

Query: 365 --------IH-------------MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
                   +H             M+  K+  + VT++ ++ +C     L  G  LH Y  
Sbjct: 686 WNTLISGCVHNGDTKKAVALLHKMQQEKMELDLVTLISIIPICRVXENLIQGMTLHGYAI 745

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
           K G   DV L  AL+ MY  CGD+N    LF    +R I  WNA++ GY  H    E + 
Sbjct: 746 KTGFACDVSLVNALISMYFNCGDINAGKFLFEVMPWRSIVSWNALITGYRFHYLQNEVMA 805

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
            F  M   G KPN +T + LL +C     + +GKS+
Sbjct: 806 SFCQMIXEGQKPNYVTLLNLLPSCX---TLLQGKSI 838



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 220/488 (45%), Gaps = 44/488 (9%)

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           D YV    I      G+   A   F+ +    V   + MIR     GL E+ L V  + R
Sbjct: 278 DEYVVAEFIISCFHLGAPELALSAFEAIEKPSVFLQNLMIRRLCDHGLFEDVLCVYLKCR 337

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGN 224
            +     +     ++   + +  V + + +H  V+R   +E L   I TAL+D Y+K G 
Sbjct: 338 VLGCPSDDFTFPFVIKACSALGAVWIAEGVHCIVLRTAFEENL--VIQTALVDFYAKTGR 395

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
           +  A+ + ++++Q  +V+W  +ISGY       E   +  +++E  + P+  T  S+I  
Sbjct: 396 MVKARLVLDKISQPDLVTWNALISGYSLNGFDKEVFEVLRQILEMGLKPNVSTFASIIPL 455

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
           C  +  L +GK +H +++++GF     +  AL+ MY     +  AR LFD    K+V+IW
Sbjct: 456 CTRMKCLDIGKSIHGFVVKSGFSSDEFLTPALISMYAGGGNLFIARDLFDSAAEKNVVIW 515

Query: 345 NAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK 404
           N++ISAYAQ     +AF++F  M  + ++PN VT V ++  C  +     GK LH ++ K
Sbjct: 516 NSMISAYAQNQKSSEAFKMFQQMLKANMQPNVVTFVSIIPCCENSANFWXGKSLHAHVMK 575

Query: 405 QGLEVDVILKTALVDMYAKCGDVNGA----YRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
             L+  + + TAL+ MYAK GD N A    Y++  +  YRD     +M++GYG+   G  
Sbjct: 576 YRLDSQLSVATALLSMYAKLGDXNSAXFIFYQMPRKTSYRD-----SMISGYGIMSMGRP 630

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
              F+V +        G  F   LN  +                              ++
Sbjct: 631 --FFWVRLLMHLAIKTGKEFDSXLNISN-----------------------------ALL 659

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYG 580
                 G L  + ++ + MPLR N I W  L++   +H   +   +A    ++ E     
Sbjct: 660 AFYSDCGKLSSSFKLFQKMPLR-NAISWNTLISGC-VHNGDTKKAVALLHKMQQEKMELD 717

Query: 581 YNVLMSNI 588
              L+S I
Sbjct: 718 LVTLISII 725


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  340 bits (873), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 191/523 (36%), Positives = 300/523 (57%), Gaps = 21/523 (4%)

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
           N +I  Y + G +  AR +FD MP R+VVSW++M+RGY + G+ EEA ++  EM     R
Sbjct: 87  NGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMP----R 142

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
            + V+   M+      + +D  K +   +    KD    V + T +I  Y + G L  A+
Sbjct: 143 RNVVSWTVMIGGLLKESRIDDAKKLFDMIPE--KD----VVVVTNMIGGYCQVGRLDEAR 196

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           +LF+ +   +V +WT M+SGY +   ++   +LF  M E N    E++  ++++     G
Sbjct: 197 ELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERN----EVSWTAMLM-----G 247

Query: 290 GLQLGKWLHAYILRNGFEFSLAMA-NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
             Q G+   A+ L         +A N ++  +G   E+  AR +F+GMK +D   WNA+I
Sbjct: 248 YTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMI 307

Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
             + +     +A  LF  M+   V  N  +M+ +LS+C    +L+ G+ +H  + +   +
Sbjct: 308 KVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFD 367

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            D+ + + L+ MY KCGD+  A  +F+  +++D+ MWN+M+ GY  HG GEEAL  F DM
Sbjct: 368 QDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDM 427

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
             SGV+P+ +TFIG+L+ACS++G V EG  +F+ M     + P IEHY CMVDLLGRAG 
Sbjct: 428 CSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGR 487

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNI 588
           +DEA E+++ MP+ P+ IVWGALL A + H    + E+A  ++ ++EP+N G  VL+S++
Sbjct: 488 VDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHM 547

Query: 589 YAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           YA   RW DV  +R+ +   RV K PG S +EV   VH F  G
Sbjct: 548 YATKGRWRDVEVLRKKINR-RVIKFPGCSWIEVEKKVHMFTGG 589



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 181/365 (49%), Gaps = 32/365 (8%)

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG---LPEEALEV 159
           + D  V   +I  Y + G L  AR LFDEM  R+V +W+TM+ GY + G   +  +  EV
Sbjct: 173 EKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEV 232

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
           M E        +EV+  +M+  +        G+   A  +      K  VA    +I  +
Sbjct: 233 MPER-------NEVSWTAMLMGYTQS-----GRMKEAFELFEAMPVKWIVA-CNEMILQF 279

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV---FPSEI 276
              G +  A+ +F  + +    +W  MI  + R     E + LFA M  E V   FPS I
Sbjct: 280 GLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMI 339

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           ++LS+   C  +  L  G+ +HA ++R+ F+  L +A+ L+ MY KC ++  A+ +F+  
Sbjct: 340 SVLSV---CASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRF 396

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             KDV++WN++I+ Y+Q    ++A  +F  M  S V+P+EVT +G+LS C+ +G ++ G 
Sbjct: 397 LFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGF 456

Query: 397 WLH-----TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMA 450
            +      TY  + G+E        +VD+  + G V+ A  L  +  +  D  +W A++ 
Sbjct: 457 EIFEAMKCTYQVEPGIE----HYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLG 512

Query: 451 GYGMH 455
               H
Sbjct: 513 ACRNH 517



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 110/210 (52%), Gaps = 2/210 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  + +      AL ++A M++ G  ++  ++ ++L  CA +     G+++H   +
Sbjct: 303 WNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLV 362

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++  D D YV++ LI MY +CG LV A+ +F+    +DVV W++MI GY + GL EEAL 
Sbjct: 363 RSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALN 422

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           V  +M    ++P EV  I ++S  +    V  G  I   +    + E  G+     ++D+
Sbjct: 423 VFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEP-GIEHYACMVDL 481

Query: 219 YSKCGNLAYAKQLFNRLN-QNSVVSWTVMI 247
             + G +  A +L  ++  +   + W  ++
Sbjct: 482 LGRAGRVDEAMELVEKMPMEPDAIVWGALL 511



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 155/356 (43%), Gaps = 43/356 (12%)

Query: 177 SMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLN 236
           S +S +  + D+   +     V  N    +  +A   A++  Y +      A  LF+++ 
Sbjct: 24  SAISRYGRIGDIHNARK----VFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMP 79

Query: 237 QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
           Q + VS+  MISGY++   + +  ++F  M E NV  S  +++   ++ G V   +   W
Sbjct: 80  QRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVV-SWTSMVRGYVQEGMVEEAEKLFW 138

Query: 297 -------LHAYILRNGF--EFSLAMANALVDM---------------YGKCREIRSARTL 332
                  +   ++  G   E  +  A  L DM               Y +   +  AR L
Sbjct: 139 EMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEAREL 198

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP--NEVTMVGLLSLCTEAG 390
           FD MK ++V  W  ++S YA+   +D A +LF      +V P  NEV+   +L   T++G
Sbjct: 199 FDEMKVRNVFTWTTMVSGYAKNGRVDVARKLF------EVMPERNEVSWTAMLMGYTQSG 252

Query: 391 ALEMGKWLHTYIEKQGLEVDVILK-TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            ++    L      + + V  I+    ++  +   G+++ A  +F     RD   WNAM+
Sbjct: 253 RMKEAFELF-----EAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMI 307

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
             +   G   EAL  F  M+R GV  N  + I +L+ C+    +  G+ V  ++V 
Sbjct: 308 KVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVR 363



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 80/342 (23%), Positives = 143/342 (41%), Gaps = 59/342 (17%)

Query: 213 TALIDMYSKCGNLAYAKQLFNR--LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
           T+ I  Y + G++  A+++F+   L Q ++ SW  M+S Y   ++  + + LF +M +  
Sbjct: 23  TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQ-- 80

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
                                           RN   F     N ++  Y K   +  AR
Sbjct: 81  --------------------------------RNTVSF-----NGMISGYVKNGMVADAR 103

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
            +FD M  ++V+ W +++  Y Q   +++A +LF  M    V    V + GLL    +  
Sbjct: 104 KVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLL----KES 159

Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
            ++  K L   I     E DV++ T ++  Y + G ++ A  LF E   R++  W  M++
Sbjct: 160 RIDDAKKLFDMIP----EKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVS 215

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           GY  +G  + A   F  M       N +++  +L   + +G + E   +F+ M      V
Sbjct: 216 GYAKNGRVDVARKLFEVMPER----NEVSWTAMLMGYTQSGRMKEAFELFEAMP-----V 266

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
             I     M+   G AG +  A  M + M  R +   W A++
Sbjct: 267 KWIVACNEMILQFGLAGEMHRARMMFEGMKER-DEGTWNAMI 307



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 20/246 (8%)

Query: 309 SLAMANALVDMYGKCREIRSARTLFDG--MKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
           SL    + +  YG+  +I +AR +FD   +  + +  WNA++SAY ++H    A  LF  
Sbjct: 18  SLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQ 77

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           M     + N V+  G++S   + G +   + +   +     E +V+  T++V  Y + G 
Sbjct: 78  MP----QRNTVSFNGMISGYVKNGMVADARKVFDVMP----ERNVVSWTSMVRGYVQEGM 129

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           V  A +LF E   R++  W  M+ G       ++A   F  +    V    +    ++  
Sbjct: 130 VEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDV----VVVTNMIGG 185

Query: 487 CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
               G + E + +FD+M      V  +  +  MV    + G +D A ++ + MP R N +
Sbjct: 186 YCQVGRLDEARELFDEMK-----VRNVFTWTTMVSGYAKNGRVDVARKLFEVMPER-NEV 239

Query: 547 VWGALL 552
            W A+L
Sbjct: 240 SWTAML 245



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/200 (20%), Positives = 80/200 (40%), Gaps = 47/200 (23%)

Query: 9   NLEQTRQCHAHIIKTHF----------------------------KFSYTNIINPLTRYN 40
           +L+  RQ HA ++++ F                            +F + +++     +N
Sbjct: 350 SLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVV----MWN 405

Query: 41  SLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
           S++T Y ++     ALN++  M  +G + D  T   +L AC     ++ GK   GF I  
Sbjct: 406 SMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSAC-----SYSGKVKEGFEIFE 460

Query: 101 GLDGDAYVSNA------LIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMI---RGYHRG 150
            +     V         ++ +    G +  A  L ++MP   D + W  ++   R + + 
Sbjct: 461 AMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKL 520

Query: 151 GLPEEALEVMREMRFMDIRP 170
            L E A+E + ++   +  P
Sbjct: 521 DLAEVAVEKLAKLEPKNAGP 540


>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
          Length = 735

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 185/531 (34%), Positives = 298/531 (56%), Gaps = 9/531 (1%)

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           + YV  +L+ MY + G +  AR +FD MP R+  SWSTM+ GY      EEA ++ R M 
Sbjct: 152 NVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLM- 210

Query: 165 FMDIRPSEVAMISMVSLFADVA---DVDLGKAIHACVVRNCKDEKLG-VAIATALIDMYS 220
            ++  PSE +     ++ + V+    + +G+ +H  +V   KD  L  V++  +L+ MY+
Sbjct: 211 -LEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIV---KDGLLDFVSVENSLVTMYA 266

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           K G +  A  +F    + + ++W+ MI+GY +  E +  V +F++M      P+E T + 
Sbjct: 267 KAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVG 326

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           ++     +G L +GK  H  +++ GFE  + + +ALVDMY KC  I  A+  FD +   D
Sbjct: 327 VLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVD 386

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           +++W A++S + Q    ++A  L+  M    + P++ T+   L  C    ALE GK LHT
Sbjct: 387 IVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHT 446

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
            I K GL +   + +AL  MY+KCG++     +F     RD+  WN++++G+  +GCG  
Sbjct: 447 QIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNG 506

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           AL  F +M+  G  P+ ITFI +L ACSH GLV  G   F  M    GL P+++HY CMV
Sbjct: 507 ALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRLDHYACMV 566

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYG 580
           D+L RAG+L EA + I+S+ +     +W  +L A +  ++  +G  A  +++E+   +  
Sbjct: 567 DILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLMELGTGDSS 626

Query: 581 YNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
             +L+SNIYA   +WNDV  VR +M+   V K+PG S VE+N  VH F+ G
Sbjct: 627 AYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWVELNSRVHVFVVG 677



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 252/473 (53%), Gaps = 16/473 (3%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGS--LVSARYLFDEMPN--RDVVSWSTMIR 145
           G+ +H +A+K+G    A V+N+LI  YS      L +A  +FD++P   RDV SW++++ 
Sbjct: 31  GEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSLLN 90

Query: 146 GYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
               G  P +AL   R M     + PS  +  +  +  A  A    G A HA   +    
Sbjct: 91  PL-SGHRPLDALSRFRSMLSSSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACK-IPS 148

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI--RCNEINEGVRL 262
               V + T+L++MY K G ++ A+++F+ + Q +  SW+ M++GY   +C+E  E   L
Sbjct: 149 AVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSE--EAFDL 206

Query: 263 FAEMIEE-NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           F  M+EE     SE    +++       GL +G+ +H  I+++G    +++ N+LV MY 
Sbjct: 207 FRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYA 266

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           K   + +A  +F+  + ++ + W+A+I+ YAQ    D A  +F  M  +   P E T VG
Sbjct: 267 KAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVG 326

Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
           +L+  ++ GAL +GK  H  + K G EV + +K+ALVDMYAKCG +  A   F +    D
Sbjct: 327 VLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVD 386

Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
           I +W AM++G+  +G  EEAL  +  M++ G+ P+  T    L AC+    +  GK +  
Sbjct: 387 IVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHT 446

Query: 502 KMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           ++V +GLGL   +     +  +  + G L++   + + +P R ++I W ++++
Sbjct: 447 QIVKYGLGLGAPVG--SALSTMYSKCGNLEDGMSVFRRIPDR-DVIAWNSIIS 496


>gi|297742233|emb|CBI34382.3| unnamed protein product [Vitis vinifera]
          Length = 705

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 202/640 (31%), Positives = 327/640 (51%), Gaps = 81/640 (12%)

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF 129
           D+ T   +L +CA      LG  IH   +K+GL  + +V+N+L+ MY++CG +  A  LF
Sbjct: 41  DSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLF 100

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           D MP++ VVSW++M+ G+ + G  +E + +   M    ++P+E  +  ++   A   D+ 
Sbjct: 101 DHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRM-LETLQPNEYTLAVILQACAQKRDLK 159

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
           L + IH  +++      +   +  +LID Y+K G L  A++L  RL    VVSWT +ISG
Sbjct: 160 LVQLIHCHIIKT--GFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISG 217

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
            +    + + +  F EM E+ V P+ +TILS++  C  +   Q+ +W+H  +++  +  +
Sbjct: 218 CVLNGMVEKALLFFFEMQEDGVSPNTVTILSILQACSLINEWQVFQWVHGLVMKAEWREN 277

Query: 310 LAMANALVDMY---------------------GKCREIRSARTLFDGMKSKDVM------ 342
           + + N+LV+MY                     G+     +  TL  G      +      
Sbjct: 278 VFVMNSLVEMYSINGYFKEGFQIFCNFCFEGDGQYLSTETIATLLQGCSHSKCLKLGEQI 337

Query: 343 --------------IWNAVISAYAQAHCIDKAFELFIHMKVSK----------------- 371
                         + N++I  YA+    D AF+LF  M                     
Sbjct: 338 HGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSS 397

Query: 372 ------------------VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
                             + P+ VT++  +  C+   +L++G+ +H YI + GL  D+ +
Sbjct: 398 YQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLASLQLGQVIHGYITRAGLICDIFV 457

Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
           + +LVDMY KCG ++ A ++  E   RD+  WN+++A YG++G G  AL  F  ++ +G 
Sbjct: 458 QNSLVDMYGKCGRLHLAEKVSEEMPVRDLGSWNSLIAAYGINGNGISALNVFKQLKNTGA 517

Query: 474 -KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEA 532
            +PN ITF  +L+AC+HAGLV EG  +F  M     L P+IEH+ CMVDLLGRAG L+EA
Sbjct: 518 HRPNAITFTNILSACAHAGLVAEGFEIFKSMKREYSLEPRIEHFACMVDLLGRAGRLEEA 577

Query: 533 HEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVA 592
              I+ MP  P   VWGALL    L  N  + E  A ++  +EP++  + V +SN+YA  
Sbjct: 578 EAFIQKMPFEPGPEVWGALLGGCGLFGNLDIAERVAKKLYILEPKSRAWRVALSNVYASV 637

Query: 593 NRWNDVAGVRRVMKEI-RVKKEPGFSSVEVNGLVHKFIRG 631
           N+W D A VR  M+    ++KE G+SSVEV G   +F+ G
Sbjct: 638 NKWEDAAKVRAEMRRSEELQKEGGWSSVEVRGQEFRFMVG 677



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 135/238 (56%), Gaps = 6/238 (2%)

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
           +     +T + ++  C     L+LG  +H  IL++G   ++ +AN+L+DMY KC  I  A
Sbjct: 37  HTLSDSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDA 96

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             LFD M  K V+ W +++S + Q    D+   +F  M +  ++PNE T+  +L  C + 
Sbjct: 97  AKLFDHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRM-LETLQPNEYTLAVILQACAQK 155

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
             L++ + +H +I K G  +D  L+ +L+D Y K G +  A +L    I RD+  W +++
Sbjct: 156 RDLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVI 215

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           +G  ++G  E+AL+FF +M+  GV PN +T + +L ACS   L+ E + VF + VHGL
Sbjct: 216 SGCVLNGMVEKALLFFFEMQEDGVSPNTVTILSILQACS---LINEWQ-VF-QWVHGL 268



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 115/485 (23%), Positives = 214/485 (44%), Gaps = 74/485 (15%)

Query: 9   NLEQTRQCHAHIIKTHF---KFSYTNIINPLTR---------------------YNSLVT 44
           +L+  +  H HIIKT F    F   ++I+  T+                     + S+++
Sbjct: 157 DLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVIS 216

Query: 45  SYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDG 104
             + N     AL  +  M+++G   +  TI +IL+AC+ +    + + +HG  +K     
Sbjct: 217 GCVLNGMVEKALLFFFEMQEDGVSPNTVTILSILQACSLINEWQVFQWVHGLVMKAEWRE 276

Query: 105 DAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR 164
           + +V N+L++MYS                          I GY +     E  ++     
Sbjct: 277 NVFVMNSLVEMYS--------------------------INGYFK-----EGFQIFCNFC 305

Query: 165 FMDIRP--SEVAMISMVSLFADVADVDLGKAIHACVVRN----CKDEKLGVAIATALIDM 218
           F       S   + +++   +    + LG+ IH   +++    C        +  +LI M
Sbjct: 306 FEGDGQYLSTETIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPC------TIVENSLIYM 359

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI----EENVFPS 274
           Y++      A QLF +++   +VSW  MIS  ++ +   + + L +E+      + ++P 
Sbjct: 360 YAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSNGGSDMIYPD 419

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            +TIL+ I  C  +  LQLG+ +H YI R G    + + N+LVDMYGKC  +  A  + +
Sbjct: 420 FVTILASIQACSSLASLQLGQVIHGYITRAGLICDIFVQNSLVDMYGKCGRLHLAEKVSE 479

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV-RPNEVTMVGLLSLCTEAGALE 393
            M  +D+  WN++I+AY        A  +F  +K +   RPN +T   +LS C  AG + 
Sbjct: 480 EMPVRDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAHRPNAITFTNILSACAHAGLVA 539

Query: 394 MGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD-ICMWNAMMAG 451
            G  +   ++++  LE  +     +VD+  + G +  A     +  +     +W A++ G
Sbjct: 540 EGFEIFKSMKREYSLEPRIEHFACMVDLLGRAGRLEEAEAFIQKMPFEPGPEVWGALLGG 599

Query: 452 YGMHG 456
            G+ G
Sbjct: 600 CGLFG 604


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 196/548 (35%), Positives = 301/548 (54%), Gaps = 8/548 (1%)

Query: 90  GKEIHGFAIKNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           G+E+HG  I  GL D    + N L+ MY++CGS+  AR +F  M ++D VSW++MI G  
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           + G   EA+E  + MR  DI P    +IS +S  A +    LG+ IH   ++   D  L 
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID--LN 449

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE-INEGVRLFAEMI 267
           V+++ AL+ +Y++ G L   +++F+ + ++  VSW  +I    R    + E V  F    
Sbjct: 450 VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQ 509

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
                 + IT  S++     +   +LGK +H   L+N         NAL+  YGKC E+ 
Sbjct: 510 RAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMD 569

Query: 328 SARTLFDGM-KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
               +F  M + +D + WN++IS Y     + KA +L   M  +  R +      +LS  
Sbjct: 570 GCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAF 629

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
                LE G  +H    +  LE DV++ +ALVDMY+KCG ++ A R F+    R+   WN
Sbjct: 630 ASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWN 689

Query: 447 AMMAGYGMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           +M++GY  HG GEEAL  F  M+  G   P+ +TF+G+L+ACSHAGL+ EG   F+ M  
Sbjct: 690 SMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSD 749

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA--SKLHKNPSM 563
             GL P+IEH+ CM D+LGRAG LD+  + I+ MP++PN+++W  +L A      +   +
Sbjct: 750 SYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAEL 809

Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
           G+ AA  + ++EP+N    VL+ N+YA   RW D+   R+ MK+  VKKE G+S V +  
Sbjct: 810 GKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKD 869

Query: 624 LVHKFIRG 631
            VH F+ G
Sbjct: 870 GVHMFVAG 877



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 262/532 (49%), Gaps = 30/532 (5%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV--LMTHLGKEIHGFAIK 99
           +V+ Y +N +   AL     M K G   + +   ++L+AC ++  +    G++IHG   K
Sbjct: 73  IVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132

Query: 100 NGLDGDAYVSNALIQMYSEC-GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
                DA VSN LI MY +C GS+  A   F ++  ++ VSW+++I  Y + G    A  
Sbjct: 133 LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFR 192

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVA--DVDLGKAIHACVVRNCKDEKLGVA----IA 212
           +   M++   RP+E    S+V+    +   DV L + I       C  +K G+     + 
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIM------CTIQKSGLLTDLFVG 246

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NV 271
           + L+  ++K G+L+YA+++FN++   + V+   ++ G +R     E  +LF +M    +V
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDV 306

Query: 272 FP-SEITILSLIIECGFVG--GLQLGKWLHAYILRNGF-EFSLAMANALVDMYGKCREIR 327
            P S + +LS   E       GL+ G+ +H +++  G  +F + + N LV+MY KC  I 
Sbjct: 307 SPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIA 366

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
            AR +F  M  KD + WN++I+   Q  C  +A E +  M+   + P   T++  LS C 
Sbjct: 367 DARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
                ++G+ +H    K G++++V +  AL+ +YA+ G +N   ++FS     D   WN+
Sbjct: 427 SLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNS 486

Query: 448 MMAGYGMHGCG-EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           ++           EA++ F++ +R+G K N ITF  +L+A S       GK      +HG
Sbjct: 487 IIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ-----IHG 541

Query: 507 LGLVPKIEHYGCMVDLL----GRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           L L   I       + L    G+ G +D   ++   M  R + + W ++++ 
Sbjct: 542 LALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 136/528 (25%), Positives = 264/528 (50%), Gaps = 11/528 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM--THLGKEIHGF 96
           +NS+++ Y +     SA  I++ M+ +GS    +T  +++     +      L ++I   
Sbjct: 174 WNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCT 233

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
             K+GL  D +V + L+  +++ GSL  AR +F++M  R+ V+ + ++ G  R    EEA
Sbjct: 234 IQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEA 293

Query: 157 LEVMREMRFM-DIRP-SEVAMISMVSLFADVADVDL--GKAIHACVVRNCKDEKLGVAIA 212
            ++  +M  M D+ P S V ++S    ++   +V L  G+ +H  V+     + + V I 
Sbjct: 294 TKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFM-VGIG 352

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
             L++MY+KCG++A A+++F  +     VSW  MI+G  +     E V  +  M   ++ 
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P   T++S +  C  +   +LG+ +H   L+ G + +++++NAL+ +Y +   +   R +
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKI 472

Query: 333 FDGMKSKDVMIWNAVISAYAQAH-CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
           F  M   D + WN++I A A++   + +A   F++ + +  + N +T   +LS  +    
Sbjct: 473 FSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSF 532

Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMA 450
            E+GK +H    K  +  +   + AL+  Y KCG+++G  ++FS  A  RD   WN+M++
Sbjct: 533 GELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMIS 592

Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
           GY  +    +AL     M ++G + +   +  +L+A +    +  G  V    V    L 
Sbjct: 593 GYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC-LE 651

Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
             +     +VD+  + G LD A     +MP+R N   W ++++    H
Sbjct: 652 SDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARH 698



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 240/487 (49%), Gaps = 22/487 (4%)

Query: 83  QVLMTHLG--KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSW 140
           Q  + H G  +  H    KN LD D Y+ N LI  Y E G  VSAR +FDEMP R+ VSW
Sbjct: 11  QSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSW 70

Query: 141 STMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL--GKAIHACV 198
           + ++ GY R G  +EAL  +R+M    I  ++ A +S++    ++  V +  G+ IH  +
Sbjct: 71  ACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLM 130

Query: 199 VRNCKDEKLGVAIATALIDMYSKC-GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN 257
            +      +   ++  LI MY KC G++ YA   F  +   + VSW  +IS Y +  +  
Sbjct: 131 FK--LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQR 188

Query: 258 EGVRLFAEMIEENVFPSEITILSLIIE-CGFV-GGLQLGKWLHAYILRNGFEFSLAMANA 315
              R+F+ M  +   P+E T  SL+   C      ++L + +   I ++G    L + + 
Sbjct: 189 SAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSG 248

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
           LV  + K   +  AR +F+ M++++ +  N ++    +    ++A +LF+ M  S +  +
Sbjct: 249 LVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMIDVS 307

Query: 376 EVTMVGLL------SLCTEAGALEMGKWLHTYIEKQGLEVDVI--LKTALVDMYAKCGDV 427
             + V LL      SL  E G L+ G+ +H ++   GL VD +  +   LV+MYAKCG +
Sbjct: 308 PESYVILLSSFPEYSLAEEVG-LKKGREVHGHVITTGL-VDFMVGIGNGLVNMYAKCGSI 365

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             A R+F     +D   WN+M+ G   +GC  EA+  +  M R  + P   T I  L++C
Sbjct: 366 ADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSC 425

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
           +       G+ +  + +  LG+   +     ++ L    G L+E  ++  SMP   + + 
Sbjct: 426 ASLKWAKLGQQIHGESLK-LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVS 483

Query: 548 WGALLAA 554
           W +++ A
Sbjct: 484 WNSIIGA 490



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 205/396 (51%), Gaps = 10/396 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS++T   +N     A+  Y  MR++     +FT+ + L +CA +    LG++IHG ++
Sbjct: 383 WNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESL 442

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG--GLPEEA 156
           K G+D +  VSNAL+ +Y+E G L   R +F  MP  D VSW+++I    R    LPE  
Sbjct: 443 KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAV 502

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATAL 215
           +  +   R    + + +   S++S  + ++  +LGK IH   ++ N  DE        AL
Sbjct: 503 VCFLNAQR-AGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADE---ATTENAL 558

Query: 216 IDMYSKCGNLAYAKQLFNRL-NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           I  Y KCG +   +++F+R+  +   V+W  MISGYI    + + + L   M++      
Sbjct: 559 IACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLD 618

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
                +++     V  L+ G  +HA  +R   E  + + +ALVDMY KC  +  A   F+
Sbjct: 619 SFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFN 678

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS-KVRPNEVTMVGLLSLCTEAGALE 393
            M  ++   WN++IS YA+    ++A +LF  MK+  +  P+ VT VG+LS C+ AG LE
Sbjct: 679 TMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLE 738

Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
            G K   +  +  GL   +   + + D+  + G+++
Sbjct: 739 EGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELD 774



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 138/310 (44%), Gaps = 14/310 (4%)

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           LS +  C  VG     ++ H+ + +N  +  + + N L++ Y +  +  SAR +FD M  
Sbjct: 7   LSFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM--GK 396
           ++ + W  ++S Y++     +A      M    +  N+   V +L  C E G++ +  G+
Sbjct: 65  RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKC-GDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
            +H  + K    VD ++   L+ MY KC G V  A   F +   ++   WN++++ Y   
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLL-NACSHAGLVTEGKSVFDKM---VHGLGLVP 511
           G    A   F  M+  G +P   TF  L+  ACS   L      + +++   +   GL+ 
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQKSGLLT 241

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL--LAASKLHKNPSMGEIAAT 569
            +     +V    ++G L  A ++   M  R  + + G +  L   K  +  +   +   
Sbjct: 242 DLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN 301

Query: 570 QILEIEPQNY 579
            ++++ P++Y
Sbjct: 302 SMIDVSPESY 311


>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Vitis vinifera]
 gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
          Length = 585

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 189/555 (34%), Positives = 311/555 (56%), Gaps = 18/555 (3%)

Query: 79  KACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ-MYSECGSLVSARYLFDEMPNRDV 137
           K  +Q+L      +IH   I   L  D + ++ L+  + S+  ++  A  +F ++   + 
Sbjct: 22  KTSSQIL------QIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNS 75

Query: 138 VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHAC 197
              +TM++ Y     PE AL    EMR   +         ++     +  +  G  +   
Sbjct: 76  FICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGE 135

Query: 198 VVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN 257
            V+  +     V +   LI MY +CG   +A+ +F+  ++  +VSW  M+ GY+ C E+ 
Sbjct: 136 AVK--RGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEME 193

Query: 258 EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF-SLAMANAL 316
               +F EM E +V    I I       G+  G ++G+   A +  +      L   N++
Sbjct: 194 NAQNMFDEMPERDVVSWSIMI------DGY--GKKMGEVNRARVFFDSMPTRDLVSWNSM 245

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           +D Y K  E+  AR +FD M  K+V+ W+ +I  YAQ     +A  LF  M    ++P+ 
Sbjct: 246 IDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDR 305

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           V++VG +S C++ GAL+ G+W+H Y+++  + +D++++TALVDMY KCG  + A R+F+ 
Sbjct: 306 VSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNS 365

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
              R++  WN M+ G GM+G G+EAL  F  ME   +  + + F+G+L ACSHA LVTEG
Sbjct: 366 MPERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEG 425

Query: 497 KSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
             +F++M     L PK+EHYGC+VDLLGRAG LD+   +I+SMP++PN  +WG+LL A +
Sbjct: 426 LHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACR 485

Query: 557 LHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGF 616
           +H+N ++ EI   ++ E++  + G  VLMSNIYA    W  +  +R++MKE ++KK+ G 
Sbjct: 486 IHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGR 545

Query: 617 SSVEVNGLVHKFIRG 631
           S +EV+G V +F+ G
Sbjct: 546 SVIEVDGNVEEFVSG 560



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 238/491 (48%), Gaps = 47/491 (9%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPL---TRY------------------ 39
           +++KN  L+L Q  +  + I++ H +   TN+I+     +R                   
Sbjct: 8   LQLKNPLLSLLQKSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVF 67

Query: 40  -----------NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH 88
                      N++V  Y +++ P  AL  YA MR+ G   DN+T P +LKAC  +    
Sbjct: 68  AQIHQPNSFICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLL 127

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
            G  + G A+K G  GD +V N LI MY  CG    AR +FD    +D+VSW++M+ GY 
Sbjct: 128 EGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYV 187

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
             G  E A  +  EM   D+           S+  D     +G+   A V  +    +  
Sbjct: 188 WCGEMENAQNMFDEMPERDVVSW--------SIMIDGYGKKMGEVNRARVFFDSMPTRDL 239

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V+   ++ID Y+K G +  A+++F+++ Q +V+SW++MI GY +  +  E + LF +M+ 
Sbjct: 240 VS-WNSMIDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLC 298

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
           + + P  ++++  +  C  +G L  G+W+H Y+ RN     + +  ALVDMY KC     
Sbjct: 299 QGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDE 358

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           AR +F+ M  ++V+ WN +I          +A E F  M++ ++  +++  +G+L  C+ 
Sbjct: 359 ARRIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSH 418

Query: 389 AGALEMGKWLHTYIEKQG---LEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICM 444
           A  +  G  LH + + +G   LE  +     LVD+  + G ++    +  S  +  +  +
Sbjct: 419 ANLVTEG--LHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAAL 476

Query: 445 WNAMMAGYGMH 455
           W +++    +H
Sbjct: 477 WGSLLLACRIH 487


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 185/593 (31%), Positives = 317/593 (53%), Gaps = 26/593 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+L++ + +      AL I+  M+ +G   D  TI ++L ACA +     G ++H +  
Sbjct: 212 FNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLF 271

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+  D  +  +L+ +Y +CG + +A  +F+     +VV W+ ++  + +     ++ E
Sbjct: 272 KAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFE 331

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +  +M+   IRP++     ++       ++DLG+ IH+  V+   +  +   ++  LIDM
Sbjct: 332 LFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDM--YVSGVLIDM 389

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           YSK G L  A+++   L +  VVSWT MI+GY++     + +  F EM +  ++P  I +
Sbjct: 390 YSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGL 449

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            S I  C  +  ++ G  +HA +  +G+   +++ NALV++Y +C  IR A + F+ ++ 
Sbjct: 450 ASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEH 509

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           KD + WN ++S +AQ+   ++A ++F+ M  S V+ N  T V  LS       ++ GK +
Sbjct: 510 KDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQI 569

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
           H  + K G   +  +  AL+ +Y KCG    A   FSE   R+   WN ++     HG G
Sbjct: 570 HARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRG 629

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
            EAL FF  M++                        EG S F  M    G+ P+ +HY C
Sbjct: 630 LEALDFFDQMKK------------------------EGLSYFKSMSDKYGIRPRPDHYAC 665

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           ++D+ GRAG LD A + ++ MP+  + +VW  LL+A K+HKN  +GE+AA  +LE+EP +
Sbjct: 666 VIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAAKHLLELEPHD 725

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
               VL+SN YAV  +W +   VR++M++  V+KEPG S +EV  +VH F  G
Sbjct: 726 SASYVLLSNAYAVTGKWANRDQVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVG 778



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 151/561 (26%), Positives = 284/561 (50%), Gaps = 7/561 (1%)

Query: 41  SLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
           ++++ Y +N     AL +Y  M + G     + + ++L +C +  +   G+ +H    K 
Sbjct: 113 AMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQ 172

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G   + +V NALI +Y  CGS   A  +F +MP+RD V+++T+I G+ +    E ALE+ 
Sbjct: 173 GFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIF 232

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
            EM+   + P  V + S+++  A + D+  G  +H+ + +          +  +L+D+Y 
Sbjct: 233 EEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDY--IMEGSLLDLYV 290

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           KCG++  A  +FN  N+ +VV W +++  + + N++ +   LF +M    + P++ T   
Sbjct: 291 KCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPC 350

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           ++  C   G + LG+ +H+  ++ GFE  + ++  L+DMY K   +  AR + + +K KD
Sbjct: 351 ILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKD 410

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           V+ W ++I+ Y Q      A   F  M+   + P+ + +   +S C    A+  G  +H 
Sbjct: 411 VVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHA 470

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
            +   G   DV +  ALV++YA+CG +  A+  F E  ++D   WN +++G+   G  EE
Sbjct: 471 RVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEE 530

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           AL  F+ M++SGVK N  TF+  L+A ++   + +GK +  +++   G   + E    ++
Sbjct: 531 ALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIK-TGHSFETEVGNALI 589

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYG 580
            L G+ G  ++A      M  R N + W  ++ +   H     G  A     +++ +   
Sbjct: 590 SLYGKCGSFEDAKMEFSEMSER-NEVSWNTIITSCSQH---GRGLEALDFFDQMKKEGLS 645

Query: 581 YNVLMSNIYAVANRWNDVAGV 601
           Y   MS+ Y +  R +  A V
Sbjct: 646 YFKSMSDKYGIRPRPDHYACV 666



 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 151/524 (28%), Positives = 269/524 (51%), Gaps = 12/524 (2%)

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC-AQVLMTHLGKEIHGFAIKNG 101
           +  ++    P+  L+++A   +    +        L+AC        +  EIH  AI  G
Sbjct: 13  LAGFLAQEDPAKVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAITRG 72

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
           L  D  V N LI +YS+ G ++ AR +F+E+  RD VSW  M+ GY + GL EEAL + R
Sbjct: 73  LGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYR 132

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALIDMY 219
           +M    + P+   + S++S          G+++HA   +   C +  +G     ALI +Y
Sbjct: 133 QMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVG----NALITLY 188

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            +CG+   A+++F  +     V++  +ISG+ +C      + +F EM    + P  +TI 
Sbjct: 189 LRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTIS 248

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
           SL+  C  +G LQ G  LH+Y+ + G      M  +L+D+Y KC ++ +A  +F+     
Sbjct: 249 SLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRT 308

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           +V++WN ++ A+ Q + + K+FELF  M+ + +RPN+ T   +L  CT  G +++G+ +H
Sbjct: 309 NVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIH 368

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
           +   K G E D+ +   L+DMY+K G +  A R+      +D+  W +M+AGY  H   +
Sbjct: 369 SLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCK 428

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           +AL  F +M++ G+ P+ I     ++ C+    + +G  +  + V+  G    +  +  +
Sbjct: 429 DALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHAR-VYVSGYSGDVSIWNAL 487

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL---AASKLHKN 560
           V+L  R G + EA    + +  + + I W  L+   A S LH+ 
Sbjct: 488 VNLYARCGRIREAFSSFEEIEHK-DEITWNGLVSGFAQSGLHEE 530


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 189/597 (31%), Positives = 329/597 (55%), Gaps = 3/597 (0%)

Query: 36   LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
            +  +N+++++Y  +     +L  + +MR   +E ++ T+ ++L  C+ V     G+ IHG
Sbjct: 1013 IISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHG 1072

Query: 96   FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              +K GLD +  + N L+ +YSE G    A  +F  M  RD++SW++M+  Y + G   +
Sbjct: 1073 LVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLD 1132

Query: 156  ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
             L+++ E+  M    + V   S ++  ++   +   K +HA ++     + L   +  AL
Sbjct: 1133 GLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFL--IVGNAL 1190

Query: 216  IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
            + MY K G +  AK++   + Q   V+W  +I G+    E NE V+ +  + E+ +  + 
Sbjct: 1191 VTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANY 1250

Query: 276  ITILSLIIECGFVGGL-QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            IT++S++  C     L + G  +HA+I+  GFE    + N+L+ MY KC ++ S+  +FD
Sbjct: 1251 ITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFD 1310

Query: 335  GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            G+ +K  + WNA+++A A   C ++A ++F  M+   V  ++ +  G L+       LE 
Sbjct: 1311 GLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEE 1370

Query: 395  GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
            G+ LH  + K G E D+ +  A +DMY KCG+++   ++  + I R    WN +++ +  
Sbjct: 1371 GQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFAR 1430

Query: 455  HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
            HGC ++A   F +M + G KP+ +TF+ LL+AC+H GLV EG + +D M    G+ P IE
Sbjct: 1431 HGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIE 1490

Query: 515  HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
            H  C++DLLGR+G L  A   IK MP+ PN + W +LLAA ++H N  +    A  +LE+
Sbjct: 1491 HCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLEL 1550

Query: 575  EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            +P +    VL SN+ A + +W DV  +R+ M    +KK+P  S V++   VH F  G
Sbjct: 1551 DPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMG 1607



 Score =  331 bits (849), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 180/559 (32%), Positives = 297/559 (53%), Gaps = 5/559 (0%)

Query: 61  FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECG 120
            +  N + +D      IL+ C        G  IH   I NG   D +++  LI  Y + G
Sbjct: 20  LLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVG 79

Query: 121 SLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
            +++AR +FD MP R VVSW+ M+ GY + G  E+A  +  +MR   ++ ++    S + 
Sbjct: 80  DVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALR 139

Query: 181 LFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
               +  +D+G  +  C+ +    E L V   +AL+D +SKCG +  A  LF  + +  V
Sbjct: 140 ACTSLRCLDMGIQVQGCIQKGRFVENLFVK--SALVDFHSKCGKMEDASYLFGTMMERDV 197

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           VSW  MI GY      ++   +F  M+   + P   T+ S++      GGL +   +H  
Sbjct: 198 VSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGI 257

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA--HCID 358
           I + G+     +   L++ Y K   +RSA+ L  GM  KD+    A+I+ YA    + +D
Sbjct: 258 ITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVD 317

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALV 418
            A +LF  M    +  ++V +  +L++C    +  +G  +H +  K     DV +  AL+
Sbjct: 318 -ALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALI 376

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           DMYAK G++  A R F E   +++  W ++++GY  HG G  A+  +  ME  G KPN +
Sbjct: 377 DMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDV 436

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           TF+ LL ACSH GL  EG   F+ MV+   + P+ EHY CMVDL  R GLL+EA+ ++  
Sbjct: 437 TFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCK 496

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDV 598
           + ++ N  +WGA+L AS ++   S+G+ AA+ +  ++P+N    V++++IY+ A  W+D 
Sbjct: 497 IDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDA 556

Query: 599 AGVRRVMKEIRVKKEPGFS 617
             +R++M+E   KK  G+S
Sbjct: 557 WKIRKLMEERSTKKNAGYS 575



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 157/545 (28%), Positives = 274/545 (50%), Gaps = 9/545 (1%)

Query: 36   LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
            +  + SL+  Y  +  P   LN+Y  MR+ G   +  T  T+  +C  +    LG ++ G
Sbjct: 912  VVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLG 971

Query: 96   FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              I+ G +    V+N+LI M+S   S+  A Y+FD M   D++SW+ MI  Y   GL  E
Sbjct: 972  HIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRE 1031

Query: 156  ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            +L     MR +    +   + S++S+ + V ++  G+ IH  VV+   D    V I   L
Sbjct: 1032 SLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSN--VCICNTL 1089

Query: 216  IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
            + +YS+ G    A+ +F  + +  ++SW  M++ Y++  +  +G+++ AE+++     + 
Sbjct: 1090 LTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNH 1149

Query: 276  ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
            +T  S +  C     L   K +HA I+  GF   L + NALV MYGK   +  A+ +   
Sbjct: 1150 VTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQT 1209

Query: 336  MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA-LEM 394
            M   D + WNA+I  +A+    ++A + +  ++   +  N +TMV +L  C+     L+ 
Sbjct: 1210 MPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKH 1269

Query: 395  GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
            G  +H +I   G E D  +K +L+ MYAKCGD+N +  +F     +    WNAM+A    
Sbjct: 1270 GMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAH 1329

Query: 455  HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
            HGCGEEAL  F +M   GV  +  +F G L A ++  ++ EG+ +   +V  LG    + 
Sbjct: 1330 HGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHG-LVIKLGFESDLH 1388

Query: 515  HYGCMVDLLGRAGLLDEAHEMIKSM--PLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
                 +D+ G+ G   E H+++K +  P+  + + W  L++A   H           ++L
Sbjct: 1389 VTNAAMDMYGKCG---EMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEML 1445

Query: 573  EIEPQ 577
            ++ P+
Sbjct: 1446 KLGPK 1450



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 155/509 (30%), Positives = 264/509 (51%), Gaps = 16/509 (3%)

Query: 78   LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDV 137
            LK  +++     GK +H F I   ++   + +N LI MYS+ G++  ARY+FDEM +R+ 
Sbjct: 751  LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810

Query: 138  VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV-DLGKAIHA 196
             SWSTM+ GY R GL EEA+ +  +M  + + P+   + S+++  +    + D G  +H 
Sbjct: 811  ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 870

Query: 197  CVVRNCKDEKLG-VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
             VV   K   LG V + TAL+  Y   G +  A++LF  +  ++VVSWT ++ GY     
Sbjct: 871  FVV---KTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGN 927

Query: 256  INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
              E + ++  M +E V  ++ T  ++   CG +    LG  +  +I++ GFE S+++AN+
Sbjct: 928  PGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANS 987

Query: 316  LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
            L+ M+     +  A  +FD M   D++ WNA+ISAYA      ++   F  M+      N
Sbjct: 988  LISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETN 1047

Query: 376  EVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS 435
              T+  LLS+C+    L+ G+ +H  + K GL+ +V +   L+ +Y++ G    A  +F 
Sbjct: 1048 STTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQ 1107

Query: 436  EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
                RD+  WN+MMA Y   G   + L    ++ + G   N +TF   L ACS+   + E
Sbjct: 1108 AMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIE 1167

Query: 496  GKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
                  K+VH L +V     +      +V + G+ G++ EA +++++MP +P+ + W AL
Sbjct: 1168 -----SKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMP-QPDRVTWNAL 1221

Query: 552  LAASKLHKNPSMGEIAATQILEIE-PQNY 579
            +     ++ P+    A   I E   P NY
Sbjct: 1222 IGGHAENEEPNEAVKAYKLIREKGIPANY 1250



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 259/531 (48%), Gaps = 24/531 (4%)

Query: 39   YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV-LMTHLGKEIHGFA 97
            ++++++ Y++      A+ ++  M   G E + F + +++ AC++   M   G ++HGF 
Sbjct: 813  WSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFV 872

Query: 98   IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
            +K G+ GD YV  AL+  Y   G + +A+ LF+EMP+ +VVSW++++ GY   G P E L
Sbjct: 873  VKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVL 932

Query: 158  EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
             V + MR   +  ++    ++ S    + D  LG  +   +++   ++   V++A +LI 
Sbjct: 933  NVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDS--VSVANSLIS 990

Query: 218  MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
            M+S   ++  A  +F+ +N+  ++SW  MIS Y       E +R F  M   +   +  T
Sbjct: 991  MFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTT 1050

Query: 278  ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
            + SL+  C  V  L+ G+ +H  +++ G + ++ + N L+ +Y +      A  +F  M 
Sbjct: 1051 LSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMT 1110

Query: 338  SKDVMIWNAVISAYAQ-AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
             +D++ WN++++ Y Q   C+D    L   +++ KV  N VT    L+ C+    L   K
Sbjct: 1111 ERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVM-NHVTFASALAACSNPECLIESK 1169

Query: 397  WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
             +H  I   G    +I+  ALV MY K G +  A ++       D   WNA++ G+  + 
Sbjct: 1170 IVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENE 1229

Query: 457  CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
               EA+  +  +   G+  N IT + +L ACS            D + HG+ +   I   
Sbjct: 1230 EPNEAVKAYKLIREKGIPANYITMVSVLGACSAPD---------DLLKHGMPIHAHIVLT 1280

Query: 517  G---------CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            G          ++ +  + G L+ ++ +   +    + I W A++AA+  H
Sbjct: 1281 GFESDDYVKNSLITMYAKCGDLNSSNYIFDGLG-NKSPITWNAMVAANAHH 1330



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 230/467 (49%), Gaps = 20/467 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  + ++V+ Y +N +   A  +++ MR  G + + FT  + L+AC  +    +G ++ G
Sbjct: 96  VVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQG 155

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
              K     + +V +AL+  +S+CG +  A YLF  M  RDVVSW+ MI GY   G  ++
Sbjct: 156 CIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADD 215

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----I 211
           +  + R M    + P    + S++   A+   + +   IH  +       +LG      +
Sbjct: 216 SFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIIT------QLGYGSYDIV 269

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN-EGVRLFAEMIEEN 270
              LI+ Y+K G+L  AK L   + +  + S T +I+GY      + + + LF EM + N
Sbjct: 270 TGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMN 329

Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
           +   ++ + S++  C  +    LG  +HA+ L+    + +AM NAL+DMY K  EI  A+
Sbjct: 330 IGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAK 389

Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
             FD M+ K+V+ W ++IS YA+      A  L+  M+    +PN+VT + LL  C+  G
Sbjct: 390 RAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTG 449

Query: 391 ALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAM 448
               G +  +  + K  ++      + +VD++A+ G +  AY L  +  I  +  +W A+
Sbjct: 450 LTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAI 509

Query: 449 MAG---YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGL 492
           +     YG    G+EA     +M+      N + ++ L +  S AGL
Sbjct: 510 LGASSIYGYMSLGKEAASNLFNMQ----PENSVNYVVLASIYSAAGL 552


>gi|15240572|ref|NP_200385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171613|sp|Q9FM64.1|PP431_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g55740, chloroplastic; AltName: Full=Protein
           CHLORORESPIRATORY REDUCTION 21; Flags: Precursor
 gi|9758608|dbj|BAB09241.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332009292|gb|AED96675.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 830

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 192/648 (29%), Positives = 344/648 (53%), Gaps = 75/648 (11%)

Query: 55  ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
           AL  +  M +N    DNF +P + KAC  +  +  G+ +HG+ +K+GL+   +V+++L  
Sbjct: 157 ALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLAD 216

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           MY +CG L  A  +FDE+P+R+ V+W+ ++ GY + G  EEA+ +  +MR   + P+ V 
Sbjct: 217 MYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVT 276

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
           + + +S  A++  V+ GK  HA  + N  +  L   + T+L++ Y K G + YA+ +F+R
Sbjct: 277 VSTCLSASANMGGVEEGKQSHAIAIVNGME--LDNILGTSLLNFYCKVGLIEYAEMVFDR 334

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           + +  VV+W ++ISGY++   + + + +   M  E +    +T+ +L+        L+LG
Sbjct: 335 MFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLG 394

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART----------------------- 331
           K +  Y +R+ FE  + +A+ ++DMY KC  I  A+                        
Sbjct: 395 KEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAES 454

Query: 332 --------LFDGMK----SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKV------- 372
                   LF GM+      +V+ WN +I +  +   +D+A ++F+ M+ S +       
Sbjct: 455 GLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISW 514

Query: 373 ----------------------------RPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK 404
                                       RPN  ++   LS C    +L +G+ +H YI +
Sbjct: 515 TTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIR 574

Query: 405 QGLEVDVI-LKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
                 ++ ++T+LVDMYAKCGD+N A ++F   +Y ++ + NAM++ Y ++G  +EA+ 
Sbjct: 575 NLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIA 634

Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL 523
            +  +E  G+KP+ IT   +L+AC+HAG + +   +F  +V    + P +EHYG MVDLL
Sbjct: 635 LYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLL 694

Query: 524 GRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNV 583
             AG  ++A  +I+ MP +P+  +  +L+A+    +   + +  + ++LE EP+N G  V
Sbjct: 695 ASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYV 754

Query: 584 LMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL--VHKFI 629
            +SN YAV   W++V  +R +MK   +KK+PG S +++ G   VH F+
Sbjct: 755 TISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFV 802



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 155/523 (29%), Positives = 267/523 (51%), Gaps = 8/523 (1%)

Query: 37  TRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGF 96
           T Y   V+S  KN +   AL++   M      +       IL+ C        GK+IH  
Sbjct: 36  TSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHAR 95

Query: 97  AIKNG--LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
            +KNG     + Y+   L+  Y++C +L  A  LF ++  R+V SW+ +I    R GL E
Sbjct: 96  ILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCE 155

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
            AL    EM   +I P    + ++      +     G+ +H  VV++  ++   V +A++
Sbjct: 156 GALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLED--CVFVASS 213

Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           L DMY KCG L  A ++F+ +   + V+W  ++ GY++  +  E +RLF++M ++ V P+
Sbjct: 214 LADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPT 273

Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
            +T+ + +     +GG++ GK  HA  + NG E    +  +L++ Y K   I  A  +FD
Sbjct: 274 RVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFD 333

Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
            M  KDV+ WN +IS Y Q   ++ A  +   M++ K++ + VT+  L+S       L++
Sbjct: 334 RMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKL 393

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
           GK +  Y  +   E D++L + ++DMYAKCG +  A ++F   + +D+ +WN ++A Y  
Sbjct: 394 GKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAE 453

Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
            G   EAL  F  M+  GV PN IT+  ++ +    G V E K +F +M    G++P + 
Sbjct: 454 SGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM-QSSGIIPNLI 512

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMP---LRPNMIVWGALLAA 554
            +  M++ + + G  +EA   ++ M    LRPN       L+A
Sbjct: 513 SWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSA 555



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 77/366 (21%), Positives = 148/366 (40%), Gaps = 58/366 (15%)

Query: 25  FKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV 84
            +   + II  L  + +++   ++N     A+     M+++G   + F+I   L ACA +
Sbjct: 500 LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHL 559

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVS--NALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
              H+G+ IHG+ I+N L   + VS   +L+ MY++CG +  A  +F      ++   + 
Sbjct: 560 ASLHIGRTIHGYIIRN-LQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNA 618

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           MI  Y   G  +EA+ + R +  + ++P  + + +++S      D++    I        
Sbjct: 619 MISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEI-------- 670

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
                         D+ SK            R  +  +  + +M+       E  + +RL
Sbjct: 671 ------------FTDIVSK------------RSMKPCLEHYGLMVDLLASAGETEKALRL 706

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS---LAMANALV-- 317
             EM  +   P    I SL+  C      +L  +L   +L +  E S   + ++NA    
Sbjct: 707 IEEMPFK---PDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVE 763

Query: 318 ---DMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
              D   K RE+  A+    G+K K    W  +          ++   +F+    +  R 
Sbjct: 764 GSWDEVVKMREMMKAK----GLKKKPGCSWIQITG--------EEGVHVFVANDKTHTRI 811

Query: 375 NEVTMV 380
           NE+ M+
Sbjct: 812 NEIQMM 817


>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
 gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
 gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 748

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 196/610 (32%), Positives = 326/610 (53%), Gaps = 22/610 (3%)

Query: 31  NIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
           NII+    +NSL++ Y +      A+ ++   R+   ++D FT    L  C +     LG
Sbjct: 112 NIIS----FNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG 167

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
           + +HG  + NGL    ++ N LI MYS+CG L  A  LFD    RD VSW+++I GY R 
Sbjct: 168 ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRV 227

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVS---LFADVADVDLGKAIHACVVRNCKDEKL 207
           G  EE L ++ +M    +  +  A+ S++    +  +   ++ G AIH      C   KL
Sbjct: 228 GAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIH------CYTAKL 281

Query: 208 G----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI-----NE 258
           G    + + TAL+DMY+K G+L  A +LF+ +   +VV++  MISG+++ +EI     +E
Sbjct: 282 GMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSE 341

Query: 259 GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
             +LF +M    + PS  T   ++  C     L+ G+ +HA I +N F+    + +AL++
Sbjct: 342 AFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIE 401

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
           +Y            F     +D+  W ++I  + Q   ++ AF+LF  +  S +RP E T
Sbjct: 402 LYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYT 461

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
           +  ++S C +  AL  G+ +  Y  K G++    +KT+ + MYAK G++  A ++F E  
Sbjct: 462 VSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ 521

Query: 439 YRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKS 498
             D+  ++AM++    HG   EAL  F  M+  G+KPN   F+G+L AC H GLVT+G  
Sbjct: 522 NPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLK 581

Query: 499 VFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            F  M +   + P  +H+ C+VDLLGR G L +A  +I S   + + + W ALL++ +++
Sbjct: 582 YFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVY 641

Query: 559 KNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSS 618
           K+  +G+  A +++E+EP+  G  VL+ NIY  +   +    VR +M++  VKKEP  S 
Sbjct: 642 KDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSW 701

Query: 619 VEVNGLVHKF 628
           + +    H F
Sbjct: 702 IVIGNQTHSF 711



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/507 (28%), Positives = 257/507 (50%), Gaps = 22/507 (4%)

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           LGK  HG  IK+ L+   Y+ N L+ MY +C  L  AR LFD MP R+++S++++I GY 
Sbjct: 65  LGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYT 124

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           + G  E+A+E+  E R  +++  +      +    +  D+DLG+ +H  VV N   ++  
Sbjct: 125 QMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQ-- 182

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V +   LIDMYSKCG L  A  LF+R ++   VSW  +ISGY+R     E + L A+M  
Sbjct: 183 VFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHR 242

Query: 269 ENVFPSEITILSLIIECGF---VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           + +  +   + S++  C      G ++ G  +H Y  + G EF + +  AL+DMY K   
Sbjct: 243 DGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGS 302

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCI-----DKAFELFIHMKVSKVRPNEVTMV 380
           ++ A  LF  M SK+V+ +NA+IS + Q   I      +AF+LF+ M+   + P+  T  
Sbjct: 303 LKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFS 362

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
            +L  C+ A  LE G+ +H  I K   + D  + +AL+++YA  G      + F+    +
Sbjct: 363 VVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQ 422

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           DI  W +M+  +  +   E A   F  +  S ++P   T   +++AC+    ++ G+   
Sbjct: 423 DIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQ-- 480

Query: 501 DKMVHGLGLVPKIEHYGCM----VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
              + G  +   I+ +  +    + +  ++G +  A+++   +   P++  + A++++  
Sbjct: 481 ---IQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ-NPDVATYSAMISSLA 536

Query: 557 LH--KNPSMGEIAATQILEIEPQNYGY 581
            H   N ++    + +   I+P    +
Sbjct: 537 QHGSANEALNIFESMKTHGIKPNQQAF 563



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 162/334 (48%), Gaps = 22/334 (6%)

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS-----LI 282
           AK  FN + Q+S+V+             +  G R  + + +    P    + S     L 
Sbjct: 7   AKTFFNNIAQDSLVTLIT--------KRVGLGYRFLSSLCQ----PKNTALDSEGYKILF 54

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
                 G + LGK  H +++++     L + N L++MY KCRE+  AR LFD M  ++++
Sbjct: 55  QTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNII 114

Query: 343 IWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
            +N++IS Y Q    ++A ELF+  + + ++ ++ T  G L  C E   L++G+ LH  +
Sbjct: 115 SFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLV 174

Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
              GL   V L   L+DMY+KCG ++ A  LF     RD   WN++++GY   G  EE L
Sbjct: 175 VVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPL 234

Query: 463 IFFVDMERSGVKPNGITFIGLLNACS---HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
                M R G+         +L AC    + G + +G ++       LG+   I     +
Sbjct: 235 NLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAI-HCYTAKLGMEFDIVVRTAL 293

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           +D+  + G L EA ++   MP + N++ + A+++
Sbjct: 294 LDMYAKNGSLKEAIKLFSLMPSK-NVVTYNAMIS 326


>gi|414865182|tpg|DAA43739.1| TPA: hypothetical protein ZEAMMB73_281838 [Zea mays]
          Length = 1925

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 185/577 (32%), Positives = 324/577 (56%), Gaps = 11/577 (1%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           ++LV+ Y K  K  S+L ++          D  TI  ++  C      H+ K IH +A++
Sbjct: 380 SALVSMYSKLGKLDSSLLLFCCCVAP----DATTIMNVISGCRYTKDLHMAKSIHAYAVR 435

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
           N  +    V NAL+ MY++C  + ++  LF +M  R ++SW+TMI G+   G  +  L +
Sbjct: 436 NKFESYHSVMNALLAMYADCRDISTSHTLFQKMEVRMLISWNTMISGFAEIGDSDTCLIL 495

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN-CKDEKLGVAIATALIDM 218
             +M   +++   V +I ++S F+   D  +G+++H+  +++ C  +   V++  ALI M
Sbjct: 496 FCQMFHEEVQFDLVTLIGLISSFSVPGDAIVGESVHSLAIKSGCNSD---VSLTNALITM 552

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+ CG +   +QLF+     + +++  ++SGY + N   + + LF +M+E +  P+ +T+
Sbjct: 553 YANCGIVEAGQQLFDSCCSRNTITYNALMSGYRKNNISAKILPLFYQMVENDEKPNLVTL 612

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           L+L+  C     LQ GK +H+Y +RN       +  + + MY +   I     +F  + +
Sbjct: 613 LNLLPVCQ--SQLQ-GKCIHSYAVRNFTRLETPLFTSAMGMYSRFNNIEYCSKIFSLIGA 669

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
           +++++WNA +SA  Q    D   + F HM    VRP+ VTM+ L+S C++ G       +
Sbjct: 670 RNLIVWNAFLSACVQCKQADMVVDCFKHMLFLNVRPDAVTMLALISACSQLGNAYFAACI 729

Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
              I ++G   ++++  AL+D +++CG ++ A  LF  ++ +D   W AM+  Y MHG G
Sbjct: 730 MAVILQKGFSTNILVLNALIDTHSRCGSISLARELFDSSVEKDSVTWGAMINAYSMHGNG 789

Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
           E AL  F  M  SGV P+ ITF+ +L+AC+H GLV +G+++F  +    G+ P++EHY C
Sbjct: 790 EAALDLFSMMIDSGVDPDDITFVSILSACAHNGLVEQGRTLFKSLQADYGITPRMEHYAC 849

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MVDLLGR G LDEA+++++SMP RP+  +  +LL A + H N  +GE     +++ E   
Sbjct: 850 MVDLLGRTGHLDEAYDVVRSMPFRPSDNLLESLLGACRFHGNYKIGESIGKLLIKSEYGK 909

Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPG 615
               V++SNIYA A +W+D   +R  M+   ++K  G
Sbjct: 910 SRSYVMLSNIYASAGKWSDCEQLRLDMEAKGLRKNVG 946



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 259/527 (49%), Gaps = 50/527 (9%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           ++  L  +N++V+ Y  N     A+ +   M++ G   +  T   I+  C  V    +G 
Sbjct: 201 VLRDLISWNAMVSGYSLNECFREAVEMLQEMQQGGMRPNASTFVGIVGMCGSVGDRDVGD 260

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
            +H FA+K G+  D  +++ALI MY+    L S+R +FD  P +D+VS+++MI  Y +  
Sbjct: 261 SLHAFALKGGVINDESLTSALITMYAAFDDLSSSRMVFDLHPVKDLVSFNSMISAYMQHH 320

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--- 208
           + +EA E+ R M  + +RP+ V ++S++   +D   ++ G+++H  ++      KLG   
Sbjct: 321 IWKEAFEIFRLMHCVAVRPNLVTVVSVLPSCSDFFGINHGESVHGMII------KLGLAE 374

Query: 209 -VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
            V++A+AL+ MYSK G L  +  LF                    C              
Sbjct: 375 HVSVASALVSMYSKLGKLDSSLLLF------------------CCC-------------- 402

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
              V P   TI+++I  C +   L + K +HAY +RN FE   ++ NAL+ MY  CR+I 
Sbjct: 403 ---VAPDATTIMNVISGCRYTKDLHMAKSIHAYAVRNKFESYHSVMNALLAMYADCRDIS 459

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           ++ TLF  M+ + ++ WN +IS +A+    D    LF  M   +V+ + VT++GL+S  +
Sbjct: 460 TSHTLFQKMEVRMLISWNTMISGFAEIGDSDTCLILFCQMFHEEVQFDLVTLIGLISSFS 519

Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
             G   +G+ +H+   K G   DV L  AL+ MYA CG V    +LF     R+   +NA
Sbjct: 520 VPGDAIVGESVHSLAIKSGCNSDVSLTNALITMYANCGIVEAGQQLFDSCCSRNTITYNA 579

Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
           +M+GY  +    + L  F  M  +  KPN +T + LL  C       +GK +    V   
Sbjct: 580 LMSGYRKNNISAKILPLFYQMVENDEKPNLVTLLNLLPVCQSQ---LQGKCIHSYAVRNF 636

Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
             + +   +   + +  R   ++   ++   +  R N+IVW A L+A
Sbjct: 637 TRL-ETPLFTSAMGMYSRFNNIEYCSKIFSLIGAR-NLIVWNAFLSA 681



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 175/346 (50%), Gaps = 6/346 (1%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEM--PNRDVVSWSTMIRGYH 148
           +E+H      G   D +V   L++ Y   G   SA  LF E       V S +  +R + 
Sbjct: 58  RELHAHLAVAGAIQDTFVVTGLVERYVYFGKAASAALLFAETYRSRPAVYSLNLAVRCFS 117

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
             G   E L + RE+              ++     V+ + LG+ +H  V+R      +G
Sbjct: 118 DHGFHRELLHLYRELCCFG--SDNFTFPPVIRACTAVSCLRLGREMHCRVLRTGHGGNVG 175

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
           V   TAL+D+Y+K G +  ++++F+ +    ++SW  M+SGY       E V +  EM +
Sbjct: 176 VQ--TALLDLYAKAGQIDVSRRVFDCMVLRDLISWNAMVSGYSLNECFREAVEMLQEMQQ 233

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
             + P+  T + ++  CG VG   +G  LHA+ L+ G     ++ +AL+ MY    ++ S
Sbjct: 234 GGMRPNASTFVGIVGMCGSVGDRDVGDSLHAFALKGGVINDESLTSALITMYAAFDDLSS 293

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
           +R +FD    KD++ +N++ISAY Q H   +AFE+F  M    VRPN VT+V +L  C++
Sbjct: 294 SRMVFDLHPVKDLVSFNSMISAYMQHHIWKEAFEIFRLMHCVAVRPNLVTVVSVLPSCSD 353

Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
              +  G+ +H  I K GL   V + +ALV MY+K G ++ +  LF
Sbjct: 354 FFGINHGESVHGMIIKLGLAEHVSVASALVSMYSKLGKLDSSLLLF 399



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 167/327 (51%), Gaps = 11/327 (3%)

Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN----EGVRLFAEM 266
           + T L++ Y   G  A A  LF    ++    +++ ++  +RC   +    E + L+ E+
Sbjct: 75  VVTGLVERYVYFGKAASAALLFAETYRSRPAVYSLNLA--VRCFSDHGFHRELLHLYREL 132

Query: 267 IEENVFPSE-ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
                F S+  T   +I  C  V  L+LG+ +H  +LR G   ++ +  AL+D+Y K  +
Sbjct: 133 C---CFGSDNFTFPPVIRACTAVSCLRLGREMHCRVLRTGHGGNVGVQTALLDLYAKAGQ 189

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           I  +R +FD M  +D++ WNA++S Y+   C  +A E+   M+   +RPN  T VG++ +
Sbjct: 190 IDVSRRVFDCMVLRDLISWNAMVSGYSLNECFREAVEMLQEMQQGGMRPNASTFVGIVGM 249

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
           C   G  ++G  LH +  K G+  D  L +AL+ MYA   D++ +  +F     +D+  +
Sbjct: 250 CGSVGDRDVGDSLHAFALKGGVINDESLTSALITMYAAFDDLSSSRMVFDLHPVKDLVSF 309

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
           N+M++ Y  H   +EA   F  M    V+PN +T + +L +CS    +  G+SV   M+ 
Sbjct: 310 NSMISAYMQHHIWKEAFEIFRLMHCVAVRPNLVTVVSVLPSCSDFFGINHGESVHG-MII 368

Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEA 532
            LGL   +     +V +  + G LD +
Sbjct: 369 KLGLAEHVSVASALVSMYSKLGKLDSS 395



 Score = 42.7 bits (99), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 9/189 (4%)

Query: 375 NEVTMVGLLS-LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           +E T + +L+ L  +A +L+  + LH ++   G   D  + T LV+ Y   G    A  L
Sbjct: 36  SETTPLKVLTGLLRDAYSLKCLRELHAHLAVAGAIQDTFVVTGLVERYVYFGKAASAALL 95

Query: 434 FSEAIYRD---ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
           F+E  YR    +   N  +  +  HG   E L  + ++   G   +  TF  ++ AC+  
Sbjct: 96  FAET-YRSRPAVYSLNLAVRCFSDHGFHRELLHLYRELCCFG--SDNFTFPPVIRACTAV 152

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
             +  G+ +  +++   G    +     ++DL  +AG +D +  +   M LR ++I W A
Sbjct: 153 SCLRLGREMHCRVLR-TGHGGNVGVQTALLDLYAKAGQIDVSRRVFDCMVLR-DLISWNA 210

Query: 551 LLAASKLHK 559
           +++   L++
Sbjct: 211 MVSGYSLNE 219


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 191/558 (34%), Positives = 297/558 (53%), Gaps = 40/558 (7%)

Query: 79  KACAQVLMTHLG----KEIHG-FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           +AC  +L  + G     ++H    I   L  D  ++  L++ YS  G    ARY+FD   
Sbjct: 39  EACEVILDQYPGIKTLNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSL 98

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
            ++VV ++ MIR Y    L  EAL + + M      P       ++   + + ++ +G  
Sbjct: 99  EKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQ 158

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           +H  +V+   D  L   I  AL+ MY KCG L  A+++ +++    VVSW  M++GY + 
Sbjct: 159 VHDAIVKVGLDTNL--FIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQS 216

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
            + ++ + +  EM   N+     T+ SL                                
Sbjct: 217 GQFDDALEICKEMDSLNLNHDAGTMASL-------------------------------- 244

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
            + V  Y     ++    +F+ M  K+++ WN +I+ Y      ++A  LF+ M+   ++
Sbjct: 245 -SPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMK 303

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           P+ VT+  LL  C +  AL +G+ LH YIEK  L  +++L+ AL+DMYAKCG +  A  +
Sbjct: 304 PDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDV 363

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F +   RD+  W +MM+ YG  G G +A+  F  M  SG  P+ I F+ +L+ACSH GL+
Sbjct: 364 FDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLL 423

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            +G+  F  M    G+VP+IEH+ CMVDL GRAG ++EA+  IK MP+ PN  VWGALL+
Sbjct: 424 DQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLS 483

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           A ++H    +G +AA  + ++ P+  GY VL+SNIYA A  W DV  VR  MK+I +KK 
Sbjct: 484 ACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNVRYAMKKIGIKKV 543

Query: 614 PGFSSVEVNGLVHKFIRG 631
           PG S+VE+NG VH F+ G
Sbjct: 544 PGISNVELNGQVHTFLAG 561



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 133/441 (30%), Positives = 226/441 (51%), Gaps = 42/441 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++ SY+ NN    AL+I+  M       D++T P +LKAC+ +    +G ++H   +
Sbjct: 105 FNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIV 164

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GLD + ++ NAL+ MY +CG L  AR + D+MP RDVVSW++M+ GY + G  ++ALE
Sbjct: 165 KVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALE 224

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + +EM  +++      M S+  +                                     
Sbjct: 225 ICKEMDSLNLNHDAGTMASLSPVVC----------------------------------- 249

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+   N+ Y   +F R+ + +++SW VMI+ Y+  +  NE V LF +M E  + P  +TI
Sbjct: 250 YTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTI 309

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
            SL+  CG +  L LG+ LH YI +     +L + NAL+DMY KC  +  AR +FD M+ 
Sbjct: 310 ASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRL 369

Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-W 397
           +DV+ W +++SAY ++     A  LF  M  S   P+ +  V +LS C+  G L+ G+ +
Sbjct: 370 RDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHY 429

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH- 455
                E+ G+   +     +VD++ + G+V  AY    +  +  +  +W A+++   +H 
Sbjct: 430 FRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVHS 489

Query: 456 ----GCGEEALIFFVDMERSG 472
               G     L+F +  ++SG
Sbjct: 490 KMDIGLVAADLLFQLAPKQSG 510



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 89/157 (56%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N ++  Y+ N+ P+ A++++  M + G + D  TI ++L AC  +    LG+ +H 
Sbjct: 271 LISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHK 330

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           +  K  L  +  + NAL+ MY++CG L  AR +FD+M  RDVVSW++M+  Y R G   +
Sbjct: 331 YIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYD 390

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
           A+ +  +M      P  +A +S++S  +    +D G+
Sbjct: 391 AVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGR 427


>gi|48475127|gb|AAT44196.1| hypothetical protein, contains pentatricopeptide (PPR) repeat
           [Oryza sativa Japonica Group]
 gi|51854327|gb|AAU10708.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 634

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 200/573 (34%), Positives = 308/573 (53%), Gaps = 23/573 (4%)

Query: 67  SEVDNFTIPTILKACAQV----LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSL 122
           +  D F +  + K+CA       + H    +H FA+++      +V+ AL  +Y++ G L
Sbjct: 15  APADPFVLSLVFKSCAAAADARFLPH-AASLHAFAVRSSAVSSVFVATALADVYAKAGCL 73

Query: 123 VSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLF 182
             A  +FDEMP+++VVSW+T++    R G   EAL    EMR   +     A  + ++  
Sbjct: 74  GLALKVFDEMPHKNVVSWTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYAAALTAC 133

Query: 183 ADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQN 238
           AD   +  G+ +HA         KLG+     +A  L  +Y++C ++  A    +R+   
Sbjct: 134 ADAGLLSRGREVHAFCA------KLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTR 187

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEEN----VFPSEITILSLIIECGFVGGLQLG 294
            V +WT +IS Y++     E +  F  M+ E       P+E T  ++I  C  +  + LG
Sbjct: 188 DVAAWTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLG 247

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCRE-IRSARTLFDGMKSKDVMIWNAVISAYAQ 353
           + LHA   R GF  + ++AN+LV +Y +    + +A  +F     KDV+ W+A+IS YAQ
Sbjct: 248 EQLHAQAARKGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGYAQ 307

Query: 354 AHCIDKAFELFIHMKVSK--VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
               + AF LF  M+      RPNE T+  LLS+C  A +L+ G+ LHT     GLE   
Sbjct: 308 EGLAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEHHA 367

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
           ++++AL+DMY K G +  A  +FS  +  D+  W AM+ GY  HG  ++AL  F +M   
Sbjct: 368 MIRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMCHV 427

Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDE 531
           G+KP+ +TFIG+LNAC HAG V  G    ++M    GL P  EHYGC+VDLLGRAG ++E
Sbjct: 428 GLKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRINE 487

Query: 532 AHEMIKSMPLRP-NMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYA 590
           A E+I  +     + +VW +LL A         G+ AA + +E EP   G +V M+N+YA
Sbjct: 488 AEELIGKIAANERDGVVWTSLLRACAARGEEETGKKAAERAMEAEPWGAGAHVAMANLYA 547

Query: 591 VANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
              +W++ A  R +MK+  V K  G+SS+ V G
Sbjct: 548 SKGQWHEAAQERHMMKQKGVVKGAGWSSITVGG 580



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 221/451 (49%), Gaps = 16/451 (3%)

Query: 16  CHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIP 75
           C    +K   +  + N+++    + +LV S  +  +   AL  ++ MR +G   D++   
Sbjct: 72  CLGLALKVFDEMPHKNVVS----WTTLVASLTRAGRRHEALRRFSEMRASGVHCDSYAYA 127

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
             L ACA   +   G+E+H F  K GLD   YV+N L  +Y+ C  +  A      M  R
Sbjct: 128 AALTACADAGLLSRGREVHAFCAKLGLDSTPYVANTLATLYARCSDVDRALAAVSRMGTR 187

Query: 136 DVVSWSTMIRGYHRGGLPEEALE----VMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
           DV +W+T+I  Y + G  +EA+E    ++RE   +   P+E    ++++  AD+A V LG
Sbjct: 188 DVAAWTTVISAYVQTGRAKEAIEAFVRMLREESSVAASPNEYTYAAVIAACADIAWVCLG 247

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSK-CGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           + +HA   R  K      ++A +L+ +Y++  G L+ A  +F       VVSW+ +ISGY
Sbjct: 248 EQLHAQAAR--KGFACARSVANSLVTLYTRAAGCLSAADAVFRESVVKDVVSWSAIISGY 305

Query: 251 IRCNEINEGVRLFAEMIEEN--VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
            +     +   LF EM   +    P+E T+ SL+  C     L  G+ LH   +  G E 
Sbjct: 306 AQEGLAEDAFALFREMRHHSGCPRPNEFTLASLLSVCATAASLDAGRQLHTLAVAAGLEH 365

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
              + +AL+DMYGK   +  A  +F      DV+ W A+I  YA+     KA ELF  M 
Sbjct: 366 HAMIRSALIDMYGKSGSMLDADIVFSHRVKDDVVSWTAMIVGYAEHGHSKKALELFQEMC 425

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
              ++P+ VT +G+L+ C  AG +E+G ++L+   +  GL         +VD+  + G +
Sbjct: 426 HVGLKPDHVTFIGVLNACCHAGEVELGLRYLNEMNQIYGLYPAKEHYGCVVDLLGRAGRI 485

Query: 428 NGAYRLFSE--AIYRDICMWNAMMAGYGMHG 456
           N A  L  +  A  RD  +W +++      G
Sbjct: 486 NEAEELIGKIAANERDGVVWTSLLRACAARG 516


>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 687

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 187/618 (30%), Positives = 334/618 (54%), Gaps = 19/618 (3%)

Query: 34  NPLTRY-----NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH 88
           +P T Y     N+ +   ++  KP        F+++      ++ +P +L+ C +     
Sbjct: 33  SPSTSYQRSSINTQLDGSLEPIKPLEFHEALCFIKEEKKIEPSYYLP-LLQECTKKNSVS 91

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
             + IH   IK G   D  V  +L+ +Y++CG++ +AR +FD +  R+VV+W+ ++ GY 
Sbjct: 92  EAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRRNVVAWTALMTGYV 151

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           +   P  A++V ++M      PS   +   ++  + +  + LGK +HA V++   D    
Sbjct: 152 QNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLHAFVIKYKLD--YD 209

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
            +I  AL  +YSK G+L  +  +F  + + +V+SWT +IS      +   G+R F EM+ 
Sbjct: 210 PSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGENGKAAMGLRFFNEMLL 269

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
           E++ P+E T+ +++  C     L LG+ +H+  ++ G++++L + N+++ +Y KC  +  
Sbjct: 270 EDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIMYLYLKCGHMDE 329

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDK-----------AFELFIHMKVSKVRPNEV 377
           A+ LF  M S +++ WNA+IS +AQA  + K           A  +F+ +  +  +P+  
Sbjct: 330 AQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLELNRTGKKPDLF 389

Query: 378 TMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
           T+  +L++C+   AL  G+ LH    K G   DV++ TALV+MY+KCG +  A + F E 
Sbjct: 390 TLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGSIGKASKAFVEM 449

Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
             R +  W  M+ G   HG  E+AL  F DM  +GV+PN ITF+G+L AC H+G+V E  
Sbjct: 450 STRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAACCHSGMVDEAL 509

Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
             F+ M     + P ++HYGC++ +  +   LDEA ++I  M   P+  +W  L+A  + 
Sbjct: 510 GYFEMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFDIINKMDFEPSEFIWSILIAGCRN 569

Query: 558 HKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
                +G  AA Q+L+++ ++    V + N+Y  A RW DV+ VR++MKE ++ K   +S
Sbjct: 570 LGKQELGFYAAEQLLKLKLKDTETYVTLLNMYISAKRWQDVSRVRKLMKEEKLGKFNDWS 629

Query: 618 SVEVNGLVHKFIRGGMVN 635
            + +   +H F   G ++
Sbjct: 630 WITIKEKIHSFKTTGRLH 647


>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  340 bits (872), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 185/510 (36%), Positives = 292/510 (57%), Gaps = 10/510 (1%)

Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
           L  A+ +F  + N     ++++IR       P EAL +   M    ++P  +    ++  
Sbjct: 145 LAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKA 204

Query: 182 FADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
             + +    G  +H  VV++    +    I ++LI +Y+   +L  AKQLFN  +   VV
Sbjct: 205 CNESSVTWFGLLVHTHVVKS--GFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVV 262

Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
           SW  MI GY++  E+     +F  M+  +V    I+  ++I     VG +   K L   +
Sbjct: 263 SWNAMIDGYVKHVEMGHARMVFDRMVCRDV----ISWNTMINGYAIVGKIDEAKRLFDEM 318

Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
                E +L   N+++  + KC  +  A  LF  M  +DV+ WN++++ YAQ    ++A 
Sbjct: 319 P----ERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEAL 374

Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
            LF  M+   V+P E T+V LLS C   GAL+ G  LHTYI    +EV+ I+ TALVDMY
Sbjct: 375 ALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMY 434

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
           AKCG ++ A ++F+    +D+  WN ++AG  +HG  +EA   F +M+ +GV+PN ITF+
Sbjct: 435 AKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFV 494

Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
            +L+ACSHAG+V EG+ + D M    G+ PK+EHYGC++DLL RAG L+EA E+I +MP+
Sbjct: 495 AILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPM 554

Query: 542 RPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGV 601
            PN    GALL   ++H N  +GE+   +++ ++P + G  +L+SNIYA A +W+D   V
Sbjct: 555 EPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKV 614

Query: 602 RRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           R +MK   + K PG S +E+ G+VH+F+ G
Sbjct: 615 RNLMKVNGISKVPGVSVIELKGMVHRFVAG 644



 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 137/426 (32%), Positives = 225/426 (52%), Gaps = 16/426 (3%)

Query: 35  PLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
           P + YNSL+ +   +  P  AL +Y  M ++G + D+ T P ++KAC +  +T  G  +H
Sbjct: 159 PPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVH 218

Query: 95  GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
              +K+G + D+Y+ ++LI +Y+    L +A+ LF+    RDVVSW+ MI GY +     
Sbjct: 219 THVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMG 278

Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE--KLGVAIA 212
            A  V   M   D+    ++  +M++ +A V  +D  K +         DE  +  +   
Sbjct: 279 HARMVFDRMVCRDV----ISWNTMINGYAIVGKIDEAKRLF--------DEMPERNLVSW 326

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
            +++  + KCGN+  A  LF+ +    VVSW  M++ Y +C + NE + LF +M    V 
Sbjct: 327 NSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVK 386

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P+E T++SL+  C  +G L  G  LH YI  N  E +  +  ALVDMY KC +I  A  +
Sbjct: 387 PTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQV 446

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ M+SKDV+ WN +I+  A    + +A +LF  MK + V PN++T V +LS C+ AG +
Sbjct: 447 FNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMV 506

Query: 393 EMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMA 450
           + G K L       G+E  V     ++D+ A+ G +  A  L  +  +  +     A++ 
Sbjct: 507 DEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLG 566

Query: 451 GYGMHG 456
           G  +HG
Sbjct: 567 GCRIHG 572


>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 218/677 (32%), Positives = 343/677 (50%), Gaps = 101/677 (14%)

Query: 9   NLEQTRQCHAHIIK----THFKFSYTNIIN--PLTRYNSLVTSYIKNNKPSSALNIYAFM 62
           N+ Q RQ H H++     +H  +    +IN   L  + + V S I  + PS   ++Y+ M
Sbjct: 13  NIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDS-IFTSSPSPDASVYSCM 71

Query: 63  RKNGSEVDNFTIPTILKACAQVL---------------MTHLGKEIHGFAIKNGLDGDAY 107
            K  S +        L  C   L                   G   H + +K G   D +
Sbjct: 72  LKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNMFHAYVLKLGHIDDHF 131

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           + NA++ MY++ G +  AR LF++M  R +  W++MI G  + G   EA           
Sbjct: 132 IRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEA----------- 180

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
                V + +M+                    RN       +   T+++  Y+K G+L  
Sbjct: 181 -----VVLFNMMP------------------ARN-------IITWTSMVTGYAKMGDLES 210

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A++ F+ + + SVVSW  M S Y +     E + LF +M+EE + P + T +  I  C  
Sbjct: 211 ARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSS 270

Query: 288 VGGLQLG---------------------------KWLHAYILRNGFEFSLAMANA----- 315
           +G   L                            K+ +  I RN F+   +  NA     
Sbjct: 271 IGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNI 330

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM-KVSKVRP 374
           ++  Y +  ++  AR LFD M  +DV+ WN++I+ YAQ      + ELF  M     ++P
Sbjct: 331 MISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQP 390

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           +EVT+  +LS C   GAL++  W+   + ++ +++ +    +L+ MY+KCG V  A+R+F
Sbjct: 391 DEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIF 450

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
                RD+  +N +++G+  +G G+EA+   + ME  G++P+ +T+IG+L ACSHAGL+ 
Sbjct: 451 QTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLN 510

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           EGK+VF  +       P ++HY CMVDLLGRAG LDEA  +I+SMP++P+  V+G+LL A
Sbjct: 511 EGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNA 565

Query: 555 SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEP 614
           S++HK   +GE+AA+++ E+EPQN G  VL+SNIYA   RW DV  VR +MK+  +KK  
Sbjct: 566 SRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSV 625

Query: 615 GFSSVEVNGLVHKFIRG 631
           G S VE  G VHKF  G
Sbjct: 626 GMSWVEYKGQVHKFTVG 642


>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
 gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 860

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 182/596 (30%), Positives = 332/596 (55%), Gaps = 4/596 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  +  +    S+L++Y   + N  ++ + +    L AC+Q   +  G++IH   +
Sbjct: 240 WNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV 299

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K GL  D YV  +L+ MYS+CG +  A  +F  + ++ +  W+ M+  Y        AL+
Sbjct: 300 KMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALD 359

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   MR   + P    + +++S  + +   + GK++HA + +  +  +    I +AL+ +
Sbjct: 360 LFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK--RPIQSTSTIESALLTL 417

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN--VFPSEI 276
           YSKCG    A  +F  + +  +V+W  +ISG  +  +  E +++F +M +++  + P   
Sbjct: 418 YSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSD 477

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
            + S+   C  +  L+ G  +H  +++ G   ++ + ++L+D+Y KC     A  +F  M
Sbjct: 478 IMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSM 537

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
            +++++ WN++IS Y++ +  + + +LF  M    + P+ V++  +L   +   +L  GK
Sbjct: 538 STENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGK 597

Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            LH Y  + G+  D  LK AL+DMY KCG    A  +F +  ++ +  WN M+ GYG HG
Sbjct: 598 SLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHG 657

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
               AL  F +M+++G  P+ +TF+ L++AC+H+G V EGK++F+ M    G+ P +EHY
Sbjct: 658 DCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHY 717

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
             MVDLLGRAGLL+EA+  IK+MP+  +  +W  LL+AS+ H N  +G ++A ++L +EP
Sbjct: 718 ANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEP 777

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
           +     V + N+Y  A   N+ A +  +MKE  + K+PG S +EV+   + F  GG
Sbjct: 778 ERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGG 833



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 148/539 (27%), Positives = 262/539 (48%), Gaps = 21/539 (3%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSE---VDNFTIPTILKACAQVLMTHLGKEIHGF 96
           NS + + I+  +   AL++Y+  + +GS       FT P++LKAC+ +     GK IHG 
Sbjct: 28  NSGIRALIQKGEYLQALHLYS--KHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFD-------EMPNRDVVSWSTMIRGYHR 149
            +  G   D +++ +L+ MY +CG L  A  +FD        +  RDV  W++MI GY +
Sbjct: 86  VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV--DLGKAIHACVVRNCKDEKL 207
               +E +   R M    +RP   ++  +VS+     +   + GK IH  ++RN  D   
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTD- 204

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRL-NQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
              + TALIDMY K G    A ++F  + ++++VV W VMI G+         + L+   
Sbjct: 205 -SFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLA 263

Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
              +V     +    +  C        G+ +H  +++ G      +  +L+ MY KC  +
Sbjct: 264 KNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMV 323

Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
             A T+F  +  K + IWNA+++AYA+      A +LF  M+   V P+  T+  ++S C
Sbjct: 324 GEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCC 383

Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
           +  G    GK +H  + K+ ++    +++AL+ +Y+KCG    AY +F     +D+  W 
Sbjct: 384 SVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWG 443

Query: 447 AMMAGYGMHGCGEEALIFFVDM--ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           ++++G   +G  +EAL  F DM  +   +KP+      + NAC+    +  G  V   M+
Sbjct: 444 SLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMI 503

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
              GLV  +     ++DL  + GL + A ++  SM    NM+ W ++++    +  P +
Sbjct: 504 K-TGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMISCYSRNNLPEL 560



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 196/401 (48%), Gaps = 20/401 (4%)

Query: 177 SMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLN 236
           S++   + + ++  GK IH  VV      +    IAT+L++MY KCG L YA Q+F+  +
Sbjct: 65  SLLKACSALTNLSYGKTIHGSVV--VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWS 122

Query: 237 QNS-------VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           Q+        V  W  MI GY +     EGV  F  M+   V P   + LS+++      
Sbjct: 123 QSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFS-LSIVVSVMCKE 181

Query: 290 G---LQLGKWLHAYILRNGFEFSLAMANALVDMYGKC-REIRSARTLFDGMKSKDVMIWN 345
           G    + GK +H ++LRN  +    +  AL+DMY K    I + R   +     +V++WN
Sbjct: 182 GNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWN 241

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
            +I  +  +   + + +L++  K + V+    +  G L  C+++     G+ +H  + K 
Sbjct: 242 VMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKM 301

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
           GL  D  + T+L+ MY+KCG V  A  +FS  + + + +WNAM+A Y  +  G  AL  F
Sbjct: 302 GLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLF 361

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLG 524
             M +  V P+  T   +++ CS  GL   GKSV  ++    +     IE    ++ L  
Sbjct: 362 GFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE--SALLTLYS 419

Query: 525 RAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
           + G   +A+ + KSM    +M+ WG+L+  S L KN    E
Sbjct: 420 KCGCDPDAYLVFKSME-EKDMVAWGSLI--SGLCKNGKFKE 457



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 191/381 (50%), Gaps = 17/381 (4%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLGKEI 93
           +  + SL++   KN K   AL ++  M+ +   +  D+  + ++  ACA +     G ++
Sbjct: 439 MVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQV 498

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
           HG  IK GL  + +V ++LI +YS+CG    A  +F  M   ++V+W++MI  Y R  LP
Sbjct: 499 HGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLP 558

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
           E ++++   M    I P  V++ S++   +  A +  GK++H   +R      LG+   T
Sbjct: 559 ELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR------LGIPSDT 612

Query: 214 ----ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
               ALIDMY KCG   YA+ +F ++   S+++W +MI GY    +    + LF EM + 
Sbjct: 613 HLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKA 672

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRS 328
              P ++T LSLI  C   G ++ GK +  ++ ++ G E ++     +VD+ G+   +  
Sbjct: 673 GESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEE 732

Query: 329 ARTLFDGMK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE-VTMVGLLSLC 386
           A +    M    D  IW  ++SA    H ++    +    K+ ++ P    T V L++L 
Sbjct: 733 AYSFIKAMPIEADSSIWLCLLSASRTHHNVE--LGILSAEKLLRMEPERGSTYVQLINLY 790

Query: 387 TEAGALEMGKWLHTYIEKQGL 407
            EAG       L   ++++GL
Sbjct: 791 MEAGLKNEAAKLLGLMKEKGL 811


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 211/636 (33%), Positives = 334/636 (52%), Gaps = 62/636 (9%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMR----------------KNGSE----------VDNFT 73
           NSL+T Y +    +SA N++  MR                +NG+E          +++  
Sbjct: 88  NSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLARNGAERGSLLLIGEMLESGL 147

Query: 74  IPTILKACAQV-------LMTHLGKEIHGFAIKNGLDG-DAYVSNALIQMYSECGSLVSA 125
           +P     CA         L   +G  + G   K GL G D  V +ALI M +  G L SA
Sbjct: 148 LPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMGLWGTDVAVGSALIDMLARNGDLASA 207

Query: 126 RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV 185
           R +FD +  + VV W+ +I  Y +G   EEA+E+  +       P    M SM+S   ++
Sbjct: 208 RKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTEL 267

Query: 186 ADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCG---NLAYAKQLFNRLNQN 238
             V LG  +H+  +R      +G+A    ++  L+DMY+K      + YA ++F R+ +N
Sbjct: 268 GSVRLGLQLHSLALR------MGLASDACVSCGLVDMYAKSNIGQAMDYANKVFERMPKN 321

Query: 239 SVVSWTVMISGYIRCN-EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
            V+SWT +ISGY++   + N+ + LF EM+ E++ P+ IT  S++  C  +     G+ +
Sbjct: 322 DVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSILKSCASISDHDSGRQV 381

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           HA+++++    +  + NALV MY +   +  AR +F+ +  + ++             CI
Sbjct: 382 HAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSMI------------PCI 429

Query: 358 DKAFELFIHMKVSK--VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
            +  +  +  ++ +  V  +  T   L+S     G L  G+ LH    K G   D  +  
Sbjct: 430 TEGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAMSLKAGFGSDRFVSN 489

Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           +LV MY++CG +  A R F+E   R++  W +M++G   HG  E AL  F DM  +GVKP
Sbjct: 490 SLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERALSLFHDMILTGVKP 549

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEM 535
           N +T+I +L+ACSH GLV EGK  F  M    GL+P++EHY CMVDLL R+G++ EA E 
Sbjct: 550 NDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVDLLARSGIVKEALEF 609

Query: 536 IKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRW 595
           I  MPL+ + +VW  LL A + H N  +GEI A  ++E+EP++    VL+SN+YA A  W
Sbjct: 610 INEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAPYVLLSNLYADAGLW 669

Query: 596 NDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
           ++VA +R  M++  + KE G S +EV    H+F  G
Sbjct: 670 DEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAG 705



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 142/494 (28%), Positives = 235/494 (47%), Gaps = 54/494 (10%)

Query: 89  LGKEIHGFAIKNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPN-RDVVSWSTMIRG 146
           LG+ +H   ++  L D DA V+N+L+ +YS CG++ SAR +FD M   RD+VSW+ M   
Sbjct: 66  LGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASC 125

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC---- 202
             R G    +L ++ EM    + P+   + +               A HAC         
Sbjct: 126 LARNGAERGSLLLIGEMLESGLLPNAYTLCA---------------AAHACFPHELYCLV 170

Query: 203 ------KDEKLG-----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
                    K+G     VA+ +ALIDM ++ G+LA A+++F+ L + +VV WT++IS Y+
Sbjct: 171 GGVVLGLVHKMGLWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYV 230

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
           +     E V LF + +E+   P   T+ S+I  C  +G ++LG  LH+  LR G      
Sbjct: 231 QGECAEEAVELFLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDAC 290

Query: 312 MANALVDMYGKC---REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID-KAFELFIHM 367
           ++  LVDMY K    + +  A  +F+ M   DV+ W A+IS Y Q+   + K   LF  M
Sbjct: 291 VSCGLVDMYAKSNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEM 350

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
               ++PN +T   +L  C      + G+ +H ++ K        +  ALV MYA+ G +
Sbjct: 351 LNESIKPNHITYSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCM 410

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME--RSGVKPNGITFIGLLN 485
             A R+F++   R             M  C  E   F +D    R  V  +  TF  L++
Sbjct: 411 EEARRVFNQLYER------------SMIPCITEGRDFPLDHRIVRMDVGISSSTFASLIS 458

Query: 486 ACSHAGLVTEGKSVFD-KMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
           A +  G++T+G+ +    +  G G    + +   +V +  R G L++A      +  R N
Sbjct: 459 AAASVGMLTKGQQLHAMSLKAGFGSDRFVSN--SLVSMYSRCGYLEDACRSFNELKDR-N 515

Query: 545 MIVWGALLAASKLH 558
           +I W ++++    H
Sbjct: 516 VISWTSMISGLAKH 529


>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g14470-like [Cucumis sativus]
          Length = 759

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 218/677 (32%), Positives = 343/677 (50%), Gaps = 101/677 (14%)

Query: 9   NLEQTRQCHAHIIK----THFKFSYTNIIN--PLTRYNSLVTSYIKNNKPSSALNIYAFM 62
           N+ Q RQ H H++     +H  +    +IN   L  + + V S I  + PS   ++Y+ M
Sbjct: 13  NIRQLRQFHGHLVHNSLHSHNYWVSLLLINCTRLHAHPAYVDS-IFTSSPSPDASVYSCM 71

Query: 63  RKNGSEVDNFTIPTILKACAQVL---------------MTHLGKEIHGFAIKNGLDGDAY 107
            K  S +        L  C   L                   G   H + +K G   D +
Sbjct: 72  LKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGNLFHAYVLKLGHIDDHF 131

Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
           + NA++ MY++ G +  AR LF++M  R +  W++MI G  + G   EA           
Sbjct: 132 IRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMISGCWKSGNETEA----------- 180

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
                V + +M+                    RN       +   T+++  Y+K G+L  
Sbjct: 181 -----VVLFNMMP------------------ARN-------IITWTSMVTGYAKMGDLES 210

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           A++ F+ + + SVVSW  M S Y +     E + LF +M+EE + P + T +  I  C  
Sbjct: 211 ARRYFDEMPERSVVSWNAMQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSS 270

Query: 288 VGGLQLG---------------------------KWLHAYILRNGFEFSLAMANA----- 315
           +G   L                            K+ +  I RN F+   +  NA     
Sbjct: 271 IGDPTLADSILRMIDQKHIVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNI 330

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM-KVSKVRP 374
           ++  Y +  ++  AR LFD M  +DV+ WN++I+ YAQ      + ELF  M     ++P
Sbjct: 331 MISAYTRVGKLSLARELFDNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQP 390

Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           +EVT+  +LS C   GAL++  W+   + ++ +++ +    +L+ MY+KCG V  A+R+F
Sbjct: 391 DEVTIASVLSACGHIGALKLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIF 450

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
                RD+  +N +++G+  +G G+EA+   + ME  G++P+ +T+IG+L ACSHAGL+ 
Sbjct: 451 QTMGTRDVVSFNTLISGFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLN 510

Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           EGK+VF  +       P ++HY CMVDLLGRAG LDEA  +I+SMP++P+  V+G+LL A
Sbjct: 511 EGKNVFKSIQ-----APTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNA 565

Query: 555 SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEP 614
           S++HK   +GE+AA+++ E+EPQN G  VL+SNIYA   RW DV  VR +MK+  +KK  
Sbjct: 566 SRIHKRVGLGELAASKLFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSV 625

Query: 615 GFSSVEVNGLVHKFIRG 631
           G S VE  G VHKF  G
Sbjct: 626 GMSWVEYKGQVHKFTVG 642


>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 201/647 (31%), Positives = 351/647 (54%), Gaps = 26/647 (4%)

Query: 3   IKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPL---------TRYNSLVTSYIKNNKPS 53
           + N  LN+  T       + T + F+  +++  +           +N++++ Y+K  +  
Sbjct: 141 VYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLI 200

Query: 54  SALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD--GDAYVSNA 111
            A  ++  M + G      +   +  A  ++        ++G  +K G D   D +V ++
Sbjct: 201 EAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSS 260

Query: 112 LIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL----EVMREMRFMD 167
            I MY+E G +  AR +FD    R+   W+TMI GY +   P EA+    +VM   +F+ 
Sbjct: 261 AIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFV- 319

Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
               +V  +S ++  + +  ++LG+ +HA ++++     L V I  A+I MYS+CG++  
Sbjct: 320 --LDDVTFLSALTAISQLQWLELGRQLHAYILKS--STILQVVILNAIIVMYSRCGSIGT 375

Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
           + ++F+ + +  VV+W  M+S +++    +EG+ L   M ++      +T+ +L+     
Sbjct: 376 SFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGFMVDSVTLTALLSLASN 435

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS--KDVMIWN 345
           +   ++GK  HAY++R+G +F   M + L+DMY K   I +A+ LF+      +D   WN
Sbjct: 436 LRSQEIGKQAHAYLIRHGIQFE-GMDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWN 494

Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
           A+I+ Y Q    ++ F +F  M    VRPN VT+  +L  C   G + +GK +H +  + 
Sbjct: 495 AMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRC 554

Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
            L  +V + TAL+DMY+K G +  A  +F+E + ++   +  M++ YG HG GE AL  F
Sbjct: 555 FLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLF 614

Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
             M  SG+KP+ +TF+ +L+ACS+AGLV EG  +F  M     + P  EHY C+ D+LGR
Sbjct: 615 HAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKIQPSAEHYCCVADMLGR 674

Query: 526 AGLLDEAHEMIKSMPLRPNMI-VWGALLAASKLHKNPSMGEIAATQILEIEPQN--YGYN 582
            G + EA+E +K +    N   +WG+LL A ++H    +G++ A ++LE+E  +   GY+
Sbjct: 675 VGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFELGKVVANKLLEMEKGSSLTGYH 734

Query: 583 VLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           VL+SNIYA    W++V  VR+ M++  + KE G S VEV G V+ F+
Sbjct: 735 VLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWVEVAGHVNCFM 781



 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 173/576 (30%), Positives = 291/576 (50%), Gaps = 36/576 (6%)

Query: 14  RQCHAHIIKTHFKFSYTNIINPLT-RYNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDN 71
           RQ H H     F     +I  P T  +N+++  +I NN P  AL  YA MR + S + D+
Sbjct: 49  RQGHPHQALHLFD----SIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDS 104

Query: 72  FTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVS------- 124
           +T  + LKACAQ     LGK +H   +++       V N+L+ MYS C + V        
Sbjct: 105 YTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYD 164

Query: 125 ------ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISM 178
                  R +FD M  R+VV+W+TMI  Y +     EA ++ R M  M IRP+ V+ +++
Sbjct: 165 FNNCDLVRRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNV 224

Query: 179 VSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
                 ++D D    ++  VV+   D      + ++ I MY++ G + +A+++F+   + 
Sbjct: 225 FPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLER 284

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP-SEITILSLIIECGFVGGLQLGKWL 297
           +   W  MI GY++ N   E + LF +++E   F   ++T LS +     +  L+LG+ L
Sbjct: 285 NTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQL 344

Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
           HAYIL++     + + NA++ MY +C  I ++  +F  M  +DV+ WN ++SA+ Q    
Sbjct: 345 HAYILKSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLD 404

Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
           D+   L   M+      + VT+  LLSL +   + E+GK  H Y+ + G++ +  + + L
Sbjct: 405 DEGLMLVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEG-MDSYL 463

Query: 418 VDMYAKCGDVNGAYRLFSE-AIY-RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
           +DMYAK G +  A +LF + + Y RD   WNAM+AGY  +G  EE    F  M    V+P
Sbjct: 464 IDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRP 523

Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GCMVDLLGRAGLLDE 531
           N +T   +L AC+  G +  GK      +HG  +   +         ++D+  ++G +  
Sbjct: 524 NAVTLASILPACNPMGTIGLGKQ-----IHGFAIRCFLNRNVFVGTALLDMYSKSGAITY 578

Query: 532 AHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
           A E + +  L  N + +  ++++   H    MGE A
Sbjct: 579 A-ENVFAETLEKNSVTYTTMISSYGQH---GMGERA 610


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 189/592 (31%), Positives = 305/592 (51%), Gaps = 11/592 (1%)

Query: 42  LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
           ++  Y +NN+P  A N+Y  M ++G + D+ T  T+L             +IH   I+ G
Sbjct: 114 MIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFG 173

Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
                 V N+L+  Y +   L  A  LF EMP +D VS++ MI GY + G  EEAL++  
Sbjct: 174 FSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFM 233

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
           +MR MD +PS     +M+ +     DV  G+ IH   ++        + +A AL+D YSK
Sbjct: 234 QMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSY--VWDIFVANALLDFYSK 291

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM----IEENVFPSEIT 277
              +  AK LF+ + +   VS+ ++I+GY    +  +   LF  +     +   FP    
Sbjct: 292 HDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATM 351

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           +    IE      L +G+  HA  +       + + NALVDMY KC +   A  +F  + 
Sbjct: 352 LSVAAIELN----LSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLA 407

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            ++ + W A+IS Y Q    ++A ++F  M    V  ++ T    L       ++ +GK 
Sbjct: 408 YRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQ 467

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH+ + + GL   V   + LVDMYA CG +  A  +F E   R+I  WNA+++ Y  +G 
Sbjct: 468 LHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNALISAYSQNGD 527

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
            E     F DM  SG+ P+ ++F+ +L ACSH GLV +    F+ M     L P+ +HY 
Sbjct: 528 AEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYA 587

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP- 576
            M+D+L R+G  +EA  +I  MP  P+ ++W ++L + ++HKN  + + AA Q+ +++  
Sbjct: 588 TMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKAADQLFKMDAL 647

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           ++    V MSNIYA A +W + A V++ M+E  VKK   +S VE++  VH F
Sbjct: 648 RDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWVEIDHRVHVF 699



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/445 (29%), Positives = 220/445 (49%), Gaps = 4/445 (0%)

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
           N ++  Y +  +L  AR LF+ M +R+ VSW+ MI GY +   P+EA  +  EM    ++
Sbjct: 81  NMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVK 140

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           P  +   +++S F D   +     IH+ ++R      L   +  +L+D Y K   L  A 
Sbjct: 141 PDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASL--IVFNSLVDSYCKTCCLDIAS 198

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           QLF+ +     VS+ VMI+GY +     E ++LF +M   +  PS  T  +++       
Sbjct: 199 QLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSE 258

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
            +  G+ +H   ++  + + + +ANAL+D Y K   I  A+ LFD M   D + +N +I+
Sbjct: 259 DVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIIT 318

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
            YA     +K+F+LF  ++ +           +LS+      L MG+  H          
Sbjct: 319 GYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVS 378

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           +V +  ALVDMYAKC     A R+F+   YR+   W A+++ Y   G  EEAL  F +M 
Sbjct: 379 EVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMN 438

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
           R  V  +  TF   L A ++   V+ GK +   ++  LGL+  +     +VD+    G +
Sbjct: 439 RENVHGDQATFASTLKASANLASVSLGKQLHSSVIR-LGLLSSVFSGSVLVDMYANCGSM 497

Query: 530 DEAHEMIKSMPLRPNMIVWGALLAA 554
            +A E+ K MP R N++ W AL++A
Sbjct: 498 KDAIEVFKEMPDR-NIVCWNALISA 521



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 227/474 (47%), Gaps = 32/474 (6%)

Query: 10  LEQTRQCHAHIIKTHFKFS---YTNIINPLTR---------------------YNSLVTS 45
           L++  Q H+HII+  F  S   + ++++   +                     +N ++T 
Sbjct: 159 LKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITG 218

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
           Y K      AL ++  MR    +   FT   +L           G++IHG AIK     D
Sbjct: 219 YTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWD 278

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRF 165
            +V+NAL+  YS+   +  A+ LFDEMP  D VS++ +I GY   G  E++ ++ + ++ 
Sbjct: 279 IFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQG 338

Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHA-CVVRNCKDEKLGVAIATALIDMYSKCGN 224
                      +M+S+ A   ++ +G+  HA  VV     E   V +  AL+DMY+KC  
Sbjct: 339 TSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSE---VQVGNALVDMYAKCEK 395

Query: 225 LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIE 284
              A ++F  L   + V WT +IS Y++     E +++F EM  ENV   + T  S +  
Sbjct: 396 FEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKA 455

Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
              +  + LGK LH+ ++R G   S+   + LVDMY  C  ++ A  +F  M  ++++ W
Sbjct: 456 SANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCW 515

Query: 345 NAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK 404
           NA+ISAY+Q    +  F  F  M  S + P+ V+ + +L+ C+  G +E   W    +  
Sbjct: 516 NALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSM-T 574

Query: 405 QGLEVDVILK--TALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMH 455
           Q  ++D   K    ++D+  + G  N A  L SE  +  D  MW++++    +H
Sbjct: 575 QVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIH 628



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 129/300 (43%), Gaps = 41/300 (13%)

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           I I S    CGF   + +   + A I++ GF+  ++  N  +    +  +I  AR LFD 
Sbjct: 13  IRIFSKRFYCGFSERI-VDIPVDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDE 71

Query: 336 MK-------------------------------SKDVMIWNAVISAYAQAHCIDKAFELF 364
           M                                S++ + W  +I  Y+Q +   +AF L+
Sbjct: 72  MPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLY 131

Query: 365 IHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC 424
             M  S V+P+ +T   LLS   +   L+    +H++I + G    +I+  +LVD Y K 
Sbjct: 132 TEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKT 191

Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
             ++ A +LFSE   +D   +N M+ GY  +G  EEAL  F+ M     +P+G TF  +L
Sbjct: 192 CCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAML 251

Query: 485 NACSHAGLVTEGKSVFDKMVHGLGL----VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
                   V     +F + +HGL +    V  I     ++D   +   +D A  +   MP
Sbjct: 252 GMS-----VGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNLFDEMP 306


>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 169/440 (38%), Positives = 259/440 (58%), Gaps = 31/440 (7%)

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI 282
           G+LAYA+ +F+R+ + +   W  MI GY    E  E + L+  M+  +V  +  T   L+
Sbjct: 66  GSLAYARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLL 125

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
             C  +   +  + +HA+I++ GF   +   N+L+++Y K  +I+SAR LFD +  +D +
Sbjct: 126 KACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTV 185

Query: 343 IWNAVISAYAQAHCIDKAFELFIHM-------------------------------KVSK 371
            WN++I  Y +   I+ A+E+F HM                               + + 
Sbjct: 186 SWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAG 245

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           ++ + V +V  L  C + G L+ GKW+H YI+K  +E+D IL   L+DMYAKCGD+  A 
Sbjct: 246 IKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAI 305

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
            +F +   + + +W AM++GY +HG G EAL +F+ M+ +GV+PN +TF G+L ACSHAG
Sbjct: 306 EVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAG 365

Query: 492 LVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
           LV E K +F+ M    G  P IEHYGCMVDLLGRAGLL EA E+I++MP++PN  +WGAL
Sbjct: 366 LVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGAL 425

Query: 552 LAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVK 611
           L A  +H N  +G+     +++++P + G  + +++I+A A  WN  A VRR MKE  V 
Sbjct: 426 LNACHIHGNLELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVS 485

Query: 612 KEPGFSSVEVNGLVHKFIRG 631
           K PG S + VNG  H+F+ G
Sbjct: 486 KLPGCSVISVNGTAHEFLAG 505



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 193/403 (47%), Gaps = 41/403 (10%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSE--CGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           ++IHG  +K GL  D   ++ L+   +    GSL  AR +FD +   +   W+TMIRGY 
Sbjct: 35  RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTMIRGYS 94

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
               PEEAL +   M +  +  +      ++   + ++  +  + IHA +++       G
Sbjct: 95  NSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKM----GFG 150

Query: 209 VAIAT--ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
             I T  +L+++YSK G++  A+ LF++++Q   VSW  MI GY +C EI     +F  M
Sbjct: 151 SEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNHM 210

Query: 267 IEENVF--------------PSE-----------------ITILSLIIECGFVGGLQLGK 295
            E N+               P E                 + ++S +  C  +G L  GK
Sbjct: 211 PERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQGK 270

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
           W+HAYI ++  E    +   L+DMY KC ++  A  +F  M+ K V +W A+IS YA   
Sbjct: 271 WIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYAIHG 330

Query: 356 CIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK-QGLEVDVILK 414
              +A E F+ M+ + V PN++T  G+L+ C+ AG +   K L   +E+  G +  +   
Sbjct: 331 RGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHY 390

Query: 415 TALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
             +VD+  + G +  A  L     +  +  +W A++    +HG
Sbjct: 391 GCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHG 433



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 191/401 (47%), Gaps = 61/401 (15%)

Query: 9   NLEQTRQCHAHIIKT-------------------------HFKFSYTNIINPLT-RYNSL 42
           N+E+ RQ H  ++KT                         + +  +  I  P T  +N++
Sbjct: 30  NMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFRPNTFMWNTM 89

Query: 43  VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
           +  Y  + +P  AL +Y  M  +    + +T P +LKAC+ +  +   ++IH   IK G 
Sbjct: 90  IRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHIIKMGF 149

Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR------------- 149
             + Y +N+L+ +YS+ G + SAR LFD++  RD VSW++MI GY +             
Sbjct: 150 GSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAYEIFNH 209

Query: 150 ------------------GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG 191
                              G P+EAL +   M+   I+   VA++S +   AD+  +D G
Sbjct: 210 MPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLGVLDQG 269

Query: 192 KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYI 251
           K IHA + ++  + ++   +   LIDMY+KCG+L  A ++F ++ +  V  WT MISGY 
Sbjct: 270 KWIHAYIKKH--EIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVWTAMISGYA 327

Query: 252 RCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR-NGFEFSL 310
                 E +  F +M    V P+++T   ++  C   G +   K L   + R +GF+ S+
Sbjct: 328 IHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSI 387

Query: 311 AMANALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISA 350
                +VD+ G+   ++ A  L + M  K +  IW A+++A
Sbjct: 388 EHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNA 428


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 186/549 (33%), Positives = 298/549 (54%), Gaps = 5/549 (0%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVS-ARYLFDEMPNRDVVSWSTMIRGYHRG 150
           ++HG A+K     D  +  A + MY +C +L   +  LF+ +PN ++ S++ +I GY R 
Sbjct: 232 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARS 291

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN-CKDEKLGV 209
               EAL + R ++   +   EV++       A +     G  +H   +++ C+     +
Sbjct: 292 DKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSN---I 348

Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
            +A A++DMY KCG L  A  +F  +     VSW  +I+ + +     + + LF  M++ 
Sbjct: 349 CVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQS 408

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            + P E T  S++  C     L  G  +H  I+++       +  AL+DMY KC  +  A
Sbjct: 409 GMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKA 468

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
             L D +  + V+ WNA+IS ++     ++A + F  M    V P+  T   +L  C   
Sbjct: 469 EKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANL 528

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
             +E+GK +H  I K+ L+ D  + + LVDMY+KCG++     +F +A  RD   WNAM+
Sbjct: 529 VTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMV 588

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
            GY  HG GEEAL  F  M+   VKPN  TF+ +L AC H GLV +G   F  M+   GL
Sbjct: 589 CGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGL 648

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            P++EHY C+VD++GR+G + +A E+I+ MP   + ++W  LL+  K+H N  + E AA 
Sbjct: 649 DPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAY 708

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
            IL++EP++    VL+SNIYA A  WN+V  +R++M+   +KKEPG S +E+   VH F+
Sbjct: 709 SILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFL 768

Query: 630 RGGMVNWKS 638
            G   + +S
Sbjct: 769 VGDKAHPRS 777



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 235/425 (55%), Gaps = 8/425 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  YN+++  Y +++K   AL ++  ++K+G  +D  ++    +ACA +     G ++HG
Sbjct: 278 LQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHG 337

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            ++K+    +  V+NA++ MY +CG+LV A  +F+EM +RD VSW+ +I  + + G  E+
Sbjct: 338 LSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEK 397

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA--IAT 213
            L +   M    + P E    S++   A    ++ G  IH  ++++    ++G+   +  
Sbjct: 398 TLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKS----RMGLDSFVGI 453

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           ALIDMYSKCG +  A++L +RL + +VVSW  +ISG+    +  E  + F++M+E  V P
Sbjct: 454 ALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDP 513

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
              T  +++  C  +  ++LGK +HA I++   +    +++ LVDMY KC  ++  + +F
Sbjct: 514 DNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIF 573

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           +   ++D + WNA++  YAQ    ++A ++F +M++  V+PN  T + +L  C   G +E
Sbjct: 574 EKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVE 633

Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAG 451
            G  + H+ +   GL+  +   + +VD+  + G V+ A  L     +  D  +W  +++ 
Sbjct: 634 KGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSX 693

Query: 452 YGMHG 456
             +HG
Sbjct: 694 CKIHG 698



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 152/579 (26%), Positives = 252/579 (43%), Gaps = 69/579 (11%)

Query: 47  IKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDA 106
            ++  P   L I  F     +     T   I + C+       GK+ H   I        
Sbjct: 18  FQSKSPFKTLPISPFSSYQATPTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTV 77

Query: 107 YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH-RG--GLPEEALEVMRE- 162
           +V+N LIQMY +C  L  A  +FD MP RD VSW+ M+ GY  RG  G+ ++  + M   
Sbjct: 78  FVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGT 137

Query: 163 ----MRFMDIRPSEVAMISMVSLFADV--------------------------ADVDLGK 192
               +   D R   +  +   + FA V                           DV  G 
Sbjct: 138 GCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGS 197

Query: 193 AI----HACVVRNCK----------------------------DEKLGVAIATALIDMYS 220
           A+      C V+N                              D    V I TA +DMY 
Sbjct: 198 ALLDMYAKCCVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYM 257

Query: 221 KCGNLA-YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
           KC NL+  + QLFN L  +++ S+  +I GY R ++  E + +F  + +  +   E+++ 
Sbjct: 258 KCNNLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLS 317

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
                C  + G   G  +H   +++  + ++ +ANA++DMYGKC  +  A  +F+ M S+
Sbjct: 318 GAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSR 377

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           D + WNA+I+A+ Q    +K   LF+ M  S + P+E T   +L  C    AL  G  +H
Sbjct: 378 DAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIH 437

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
             I K  + +D  +  AL+DMY+KCG +  A +L      + +  WNA+++G+ +    E
Sbjct: 438 NRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSE 497

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           EA   F  M   GV P+  T+  +L+ C++   V  GK +  +++    L         +
Sbjct: 498 EAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKK-ELQSDAYISSTL 556

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           VD+  + G + +   + +  P R + + W A++     H
Sbjct: 557 VDMYSKCGNMQDFQLIFEKAPNR-DFVTWNAMVCGYAQH 594



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 124/229 (54%), Gaps = 8/229 (3%)

Query: 22  KTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC 81
           K H + +   +++    +N++++ +    +   A   ++ M + G + DNFT  TIL  C
Sbjct: 470 KLHDRLAEQTVVS----WNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTC 525

Query: 82  AQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWS 141
           A ++   LGK+IH   IK  L  DAY+S+ L+ MYS+CG++   + +F++ PNRD V+W+
Sbjct: 526 ANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWN 585

Query: 142 TMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG-KAIHACVVR 200
            M+ GY + GL EEAL++   M+  +++P+    ++++     +  V+ G    H+ +  
Sbjct: 586 AMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSN 645

Query: 201 NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMIS 248
              D +L     + ++D+  + G ++ A +L   +  +   V W  ++S
Sbjct: 646 YGLDPQL--EHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLS 692



 Score = 82.8 bits (203), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 157/389 (40%), Gaps = 82/389 (21%)

Query: 273 PSEITILSLII-ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
           P++    S I  EC     L  GK  HA ++   F+ ++ + N L+ MY KC ++  A  
Sbjct: 39  PTKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFK 98

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEV-------------- 377
           +FDGM  +D + WNA++  YA    I  A +LF  M  +     E+              
Sbjct: 99  VFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDR 158

Query: 378 -TMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC----GDVNGAYR 432
            T   +L  C+       G  +H    K G + DV+  +AL+DMYAKC     D+ G   
Sbjct: 159 TTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLE 218

Query: 433 LFSE--------------AIYRDI----------------C---------MWNAM----- 448
           LF E              A+  D                 C         ++N++     
Sbjct: 219 LFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNL 278

Query: 449 ------MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
                 + GY     G EAL  F  +++SG+  + ++  G   AC+      EG      
Sbjct: 279 QSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQ---- 334

Query: 503 MVHGLGLVPKIEHYGC----MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
            VHGL +    +   C    ++D+ G+ G L EA  + + M  R + + W A++AA + +
Sbjct: 335 -VHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSR-DAVSWNAIIAAHEQN 392

Query: 559 KNPSMGEIAATQILE--IEPQNYGYNVLM 585
            N          +L+  +EP  + Y  ++
Sbjct: 393 GNEEKTLSLFVWMLQSGMEPDEFTYGSVL 421


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  340 bits (871), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 185/592 (31%), Positives = 309/592 (52%), Gaps = 2/592 (0%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
           N  + S  K  K   A +    M      V   +   + +AC ++     G+ IH    +
Sbjct: 56  NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115

Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
              +    + N L++MY +CGS +  + +FDEM  +++VSW  +I  Y + G  E+A+ +
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175

Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
             +M+   IRP+    +S++      + ++LGK IH+ V+R        + + TA+ +MY
Sbjct: 176 FSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIR--AQLNANITVETAICNMY 233

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            +CG L  AK +F+ ++  + V+WT ++ GY +  ++   + LFA M  E V   E    
Sbjct: 234 VRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMAMEGVELDEFVFS 293

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
            ++  C  +    +G+ +H++I++ G E  +++   LVD Y KC +I SA   F  +   
Sbjct: 294 IVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISEP 353

Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
           + + W+A+IS ++Q+  ++   ++F  ++   V  N      +   C     L MG   H
Sbjct: 354 NDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAH 413

Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
               K+GL   +  ++A+V MY+KCG ++ A R F      D   W A+++GY  HG   
Sbjct: 414 GDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAA 473

Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
           EAL FF  M+  GV+PN +TFI +L ACSH+GLV E K     M    G+ P I+HY CM
Sbjct: 474 EALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDCM 533

Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNY 579
           +D   RAGLL EA E+I  MP  P+ + W +LL     H +  +G+IAA  +  ++P + 
Sbjct: 534 IDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGDT 593

Query: 580 GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
              +L+ N+Y+   +W +   VR++M E  +KKE   S + V G VH+F+ G
Sbjct: 594 AGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVG 645



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 213/426 (50%), Gaps = 4/426 (0%)

Query: 32  IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGK 91
           ++  L  +  ++++Y KN +   A+ +++ M+ +G   ++    ++L++C       LGK
Sbjct: 149 LMKNLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGK 208

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
           +IH   I+  L+ +  V  A+  MY  CG L  A+ +FD M  ++ V+W+ ++ GY +  
Sbjct: 209 QIHSHVIRAQLNANITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAK 268

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
             E ALE+   M    +   E     ++ +   + D D+G+ IH+ +V+   + +  V++
Sbjct: 269 KLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESE--VSV 326

Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
            T L+D Y KCG++  A + F R+++ + VSW+ +ISG+ +   + + +++F  +  E V
Sbjct: 327 GTPLVDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGV 386

Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSART 331
             +     S+   C     L +G   H   ++ G    L   +A+V MY KC  +  AR 
Sbjct: 387 VLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARR 446

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA 391
            F+ +   D + W A+IS YA      +A   F  M+   VRPN VT + +L+ C+ +G 
Sbjct: 447 AFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGL 506

Query: 392 L-EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMM 449
           + E  ++L +     G++  +     ++D Y++ G +  A  L +   +  D   W +++
Sbjct: 507 VAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKSLL 566

Query: 450 AGYGMH 455
            G   H
Sbjct: 567 GGCWAH 572



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 129/275 (46%), Gaps = 28/275 (10%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRY--------------------- 39
           +K+  G  + +  RQ H+HI+K   + S  ++  PL  +                     
Sbjct: 296 LKVCCGLEDWDMGRQIHSHIVKLGAE-SEVSVGTPLVDFYVKCGDIESAYRSFGRISEPN 354

Query: 40  ----NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
               ++L++ + ++ +    + I+  +R  G  +++F   ++ +ACA     ++G + HG
Sbjct: 355 DVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHG 414

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
            AIK GL    Y  +A++ MYS+CG L  AR  F+ +   D V+W+ +I GY   G   E
Sbjct: 415 DAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAE 474

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL   R M+   +RP+ V  I++++  +    V   K     + R+    K  +     +
Sbjct: 475 ALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRD-YGVKPTIDHYDCM 533

Query: 216 IDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISG 249
           ID YS+ G L  A +L NR+  +   +SW  ++ G
Sbjct: 534 IDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGG 568


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 174/424 (41%), Positives = 264/424 (62%), Gaps = 5/424 (1%)

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR---CNEINEGVRLFAE 265
           + I  +++ MY+KCG+L  A+Q+F+ +    VV+WT MI+GY +    +     + LF E
Sbjct: 126 LVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLE 185

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
           M+ + + P+E  + SL+  CGF+G    GK +H    + GF+ ++ + ++LVDMY +C E
Sbjct: 186 MVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGE 245

Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
           +R +R +FD ++SK+ + WNA+IS +A+    ++A  LF+ M+       E T   LL  
Sbjct: 246 LRESRLVFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCS 305

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
            +  G+LE GKWLH ++ K G ++   +   L+ MYAK G++  A ++F   +  D+   
Sbjct: 306 SSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSC 365

Query: 446 NAMMAGYGMHGCGEEALIFFVDMER-SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           N+M+ GY  HG G+EA+  F +M     ++PN ITF+ +L ACSHAGL+ EG   F+ ++
Sbjct: 366 NSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFE-LM 424

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
              GL PK+ HY  +VDL GRAGLLD+A   I+ MP+ PN  +WGALL ASK+HKN  MG
Sbjct: 425 KKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMG 484

Query: 565 EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
             AA ++LE++P   G + L+SNIYA A +W DVA VR+ MK+  +KKEP  S VE+   
Sbjct: 485 AYAAQKVLELDPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENS 544

Query: 625 VHKF 628
           VH F
Sbjct: 545 VHIF 548



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/438 (30%), Positives = 225/438 (51%), Gaps = 18/438 (4%)

Query: 23  THFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACA 82
           +H+    TN++ P    NS           ++ L++   +     E D      +LK C 
Sbjct: 54  SHYIIDDTNLLRPSLNPNS-----------TTGLHVLDLINNGSLEPDRTIYNKLLKRCT 102

Query: 83  QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
            +     GK +H   + +    D  + N+++ MY++CGSL  AR +FDEM  +DVV+W++
Sbjct: 103 MLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTS 162

Query: 143 MIRGYHRGGLPEE---ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           MI GY + G       AL +  EM    +RP+E A+ S+V     +     GK IH C  
Sbjct: 163 MITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCW 222

Query: 200 RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
           +    E   V + ++L+DMY++CG L  ++ +F+ L   + VSW  +ISG+ R  E  E 
Sbjct: 223 KYGFQE--NVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARKGEGEEA 280

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
           + LF +M  E    +E T  +L+      G L+ GKWLHA+++++G +    + N L+ M
Sbjct: 281 LGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVGNTLLHM 340

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV-SKVRPNEVT 378
           Y K   I  A+ +FD +   DV+  N+++  YAQ     +A ELF  M +  ++ PN++T
Sbjct: 341 YAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDIT 400

Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-A 437
            + +L+ C+ AG L+ G +    ++K GLE  +   T +VD++ + G ++ A     E  
Sbjct: 401 FLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMP 460

Query: 438 IYRDICMWNAMMAGYGMH 455
           I  +  +W A++    MH
Sbjct: 461 IEPNATIWGALLGASKMH 478



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 15/223 (6%)

Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAY 431
           + P+      LL  CT  G L+ GK +HT++       D+++K +++ MYAKCG +  A 
Sbjct: 87  LEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIAR 146

Query: 432 RLFSEAIYRDICMWNAMMAGYGMHG---CGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
           ++F E   +D+  W +M+ GY   G       AL+ F++M R G++PN      L+  C 
Sbjct: 147 QVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCG 206

Query: 489 HAGLVTEGKSVFDKMVHG----LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
             G   +GK      +HG     G    +     +VD+  R G L E+  +   +  + N
Sbjct: 207 FLGSCVDGKQ-----IHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESK-N 260

Query: 545 MIVWGALLA--ASKLHKNPSMGEIAATQILEIEPQNYGYNVLM 585
            + W AL++  A K     ++G     Q        + Y+ L+
Sbjct: 261 EVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALL 303


>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
          Length = 526

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 182/520 (35%), Positives = 282/520 (54%), Gaps = 34/520 (6%)

Query: 93  IHGFAIKNGLDGDAYVSNALIQ---MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           IH   IK GL    Y  + LI+   +      L  A  +F+ +   +++ W+TM RG+  
Sbjct: 6   IHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMFRGHAL 65

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
              P  AL +   M  + + P+      ++   A       G+ IH  V++   D  L V
Sbjct: 66  SSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYV 125

Query: 210 AIA-----------------------------TALIDMYSKCGNLAYAKQLFNRLNQNSV 240
             +                             TALI  Y+  G +  A++LF+ +    V
Sbjct: 126 HTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 185

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           VSW  MISGY       E + LF +M++ NV P E T+++++  C   G ++LG+ +H +
Sbjct: 186 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 245

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
           I  +GF  +L + NAL+D+Y KC E+ +A  LF+G+  KDV+ WN +I  Y   +   +A
Sbjct: 246 IDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEA 305

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK--QGLEVDVILKTALV 418
             LF  M  S   PN+VTM+ +L  C   GA+++G+W+H YI K  +G+     L T+L+
Sbjct: 306 LLLFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLI 365

Query: 419 DMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGI 478
           DMYAKCGD+  A ++F   + R +  WNAM+ G+ MHG    A   F  M ++G+ P+ I
Sbjct: 366 DMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDI 425

Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           TF+GLL+ACSH+G++  G+ +F  M     + PK+EHYGCM+DLLG  GL  EA EMI++
Sbjct: 426 TFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRT 485

Query: 539 MPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
           MP+ P+ ++W +LL A K+H N  +GE  A  +++IEP+ 
Sbjct: 486 MPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPET 525



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 155/503 (30%), Positives = 253/503 (50%), Gaps = 76/503 (15%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++   +  ++ P SAL +Y  M   G   + +T P +LK+CA+      G++IHG  +
Sbjct: 56  WNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVL 115

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSAR-------------------------------Y 127
           K G D D YV  +LI MY + G L  AR                                
Sbjct: 116 KLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALIKGYASRGYIENAQK 175

Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
           LFDE+P +DVVSW+ MI GY   G  +EALE+ ++M   ++RP E  M+++VS  A    
Sbjct: 176 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 235

Query: 188 VDLGKAIHACVVRNCKDEKLG--VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
           ++LG+ +H  +     D   G  + I  ALID+YSKCG +  A  LF  L+   V+SW  
Sbjct: 236 IELGRQVHLWI----DDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNT 291

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR-- 303
           +I GY   N   E + LF EM+     P+++T+LS++  C  +G + +G+W+H YI +  
Sbjct: 292 LIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINKRL 351

Query: 304 NGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFEL 363
            G   + ++  +L+DMY KC +I +A+ +FD M ++ +  WNA+I  +A     + AF+L
Sbjct: 352 KGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDL 411

Query: 364 FIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT--ALVDMY 421
           F  M+ + + P+++T VGLLS C+ +G L++G+ +   +  Q  ++   L+    ++D+ 
Sbjct: 412 FSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMS-QDYKITPKLEHYGCMIDLL 470

Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
             CG       LF EA                      + +I  + ME     P+G+ + 
Sbjct: 471 GHCG-------LFKEA----------------------KEMIRTMPME-----PDGVIWC 496

Query: 482 GLLNACSHAGLVTEGKSVFDKMV 504
            LL AC     V  G+S    ++
Sbjct: 497 SLLKACKMHNNVELGESYAQNLI 519



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 172/320 (53%), Gaps = 2/320 (0%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
           +  +  +N++++ Y +      AL ++  M K     D  T+ T++ ACAQ     LG++
Sbjct: 182 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 241

Query: 93  IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           +H +   +G   +  + NALI +YS+CG + +A  LF+ +  +DV+SW+T+I GY    L
Sbjct: 242 VHLWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNL 301

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            +EAL + +EM      P++V M+S++   A +  +D+G+ IH  + +  K      ++ 
Sbjct: 302 YKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLL 361

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
           T+LIDMY+KCG++  AKQ+F+ +   S+ SW  MI G+    + N    LF++M +  + 
Sbjct: 362 TSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGID 421

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSART 331
           P +IT + L+  C   G L LG+ +   + ++      L     ++D+ G C   + A+ 
Sbjct: 422 PDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKE 481

Query: 332 LFDGMK-SKDVMIWNAVISA 350
           +   M    D +IW +++ A
Sbjct: 482 MIRTMPMEPDGVIWCSLLKA 501


>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
 gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
          Length = 566

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 180/566 (31%), Positives = 307/566 (54%), Gaps = 42/566 (7%)

Query: 91  KEIHGFAIKNGLDGDAYVSNALIQMYSECG-SLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
           K +H + I +GL    Y  + +++ Y+     LV A  +FD++       W+ +IRG  +
Sbjct: 5   KRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQ 64

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG- 208
              P +A+   ++ +   + P  +    ++   A +  ++ G+ +H  +       KLG 
Sbjct: 65  SDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHIT------KLGL 118

Query: 209 ---VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
              + ++ +LI +Y+ CGNL YA+ +F+ +    VVSW  +I GY +CN   + + LF  
Sbjct: 119 LSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKL 178

Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG---- 321
           M  E V   ++T++ ++  C  +G   +  ++  YI     E  + + N LVD +G    
Sbjct: 179 MQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQ 238

Query: 322 ---------------------------KCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
                                      K ++I SAR +FD +  KD++ W+++IS Y+QA
Sbjct: 239 LQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQA 298

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
           +    A E+F  M+ +KV+P+ + +  ++S C   GAL++GKW+H Y+ +  ++ D I++
Sbjct: 299 NHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIME 358

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
            +L+DMY KCG    A ++F E   +D   WN+++ G   +G  +E+L  F  M   G +
Sbjct: 359 NSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFR 418

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
           PNG+TF+G+L AC++A LV EG   F+ M     L P+++HYGC+VDLLGRAG L++A  
Sbjct: 419 PNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALR 478

Query: 535 MIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANR 594
            I  MP+ P+ +VW  LL +   H + ++ EI   ++ E+EP N G   L+SN YA A+R
Sbjct: 479 FITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHR 538

Query: 595 WNDVAGVRRVMKEIRVKKEPGFSSVE 620
           W++   VR+ M +  V+K PG S+VE
Sbjct: 539 WSEAMNVRQCMADTDVRKSPGCSAVE 564



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 147/504 (29%), Positives = 245/504 (48%), Gaps = 35/504 (6%)

Query: 29  YTNIINPLT-RYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  I  P T  +N L+    +++ P+ A+  Y   +  G   DN T P ILKACA++   
Sbjct: 44  FDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINAL 103

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
           + G+++H    K GL  D +VSN+LI +Y+ CG+L  AR +FDEM  +DVVSW+++I GY
Sbjct: 104 NEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGY 163

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC--KDE 205
            +    ++ L + + M+   ++  +V MI +VS    + D  +   +   +   C   D 
Sbjct: 164 SQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDV 223

Query: 206 KLG---------------------------VAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
            LG                           +    A+I  Y+K  ++  A+++F+++ + 
Sbjct: 224 YLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKK 283

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
            ++SW+ MISGY + N  ++ + +F +M    V P  I I S++  C  +G L LGKW+H
Sbjct: 284 DLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVH 343

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
            Y+ RN  +    M N+L+DMY KC   + A  +F  MK KD + WN++I   A      
Sbjct: 344 EYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEK 403

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTAL 417
           ++  LF  M     RPN VT +G+L  C  A  +E G     +      LE  +     +
Sbjct: 404 ESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCV 463

Query: 418 VDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP- 475
           VD+  + G +  A R  +E  I  D  +W  ++     H  G+ A+   V  + + ++P 
Sbjct: 464 VDLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTH--GDVAIAEIVTKKLNELEPS 521

Query: 476 NGITFIGLLNACSHAGLVTEGKSV 499
           N   +  L NA + A   +E  +V
Sbjct: 522 NSGNYTLLSNAYASAHRWSEAMNV 545


>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 189/498 (37%), Positives = 282/498 (56%), Gaps = 6/498 (1%)

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
             SW+  +R   R    +EAL +  +M      P+           A ++    G  +H 
Sbjct: 21  TASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHG 80

Query: 197 CVVRN-CKDEKLGVAIATALIDMYSKCGNLAYAKQLF--NRLNQNSVVSWTVMISGYIRC 253
            V++  C+ E     + T+LI MY KC  +A A+++F  N  ++N  V +  +I+GY   
Sbjct: 81  HVIKTGCEPEPF---VQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLN 137

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
           +  ++ V LF +M +E V  + +T+L LI  C     L  G  LHA  +R G +  L++ 
Sbjct: 138 SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVG 197

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           N L+ MY +C  +  AR LFDGM  K ++ WNA+IS YAQ        +L+  M+ + + 
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIV 257

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           P+ VT+VG+LS C   GA   G+ +   IE  G   +  LK AL++MYA+CG++  A  +
Sbjct: 258 PDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAI 317

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F     +++  W A++AGYGMHG GE A+  F +M  S   P+G  F+ +L+ACSHAGL 
Sbjct: 318 FDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLT 377

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            +G   F  M    GL P  EHY C+VDLLGRAG L+EA ++I SM + P+  VWGALL 
Sbjct: 378 EKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLG 437

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           A K+H+N  + E+A  +++E EP N GY VL+SNI++ A     +  VR +M+E ++KKE
Sbjct: 438 ACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKE 497

Query: 614 PGFSSVEVNGLVHKFIRG 631
           PG S VE  G +H F+ G
Sbjct: 498 PGCSYVEYQGRIHLFLAG 515



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 230/444 (51%), Gaps = 10/444 (2%)

Query: 20  IIKTHFKFSYTN----IINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIP 75
           + + H  F Y N    + N    +N+ +    +      ALN+Y  M  +G   + FT P
Sbjct: 1   MTRPHPLFPYANKWLDLQNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFP 60

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDE-MPN 134
              K+CA + +   G ++HG  IK G + + +V  +LI MY +C ++ SAR +FDE   +
Sbjct: 61  FAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHS 120

Query: 135 RDV-VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKA 193
           R++ V ++ +I GY       +A+ + R+MR   +  + V M+ ++ + A    +  G +
Sbjct: 121 RNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTS 180

Query: 194 IHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRC 253
           +HAC VR   D  L  ++   L+ MY +CG++ +A++LF+ + +  +++W  MISGY + 
Sbjct: 181 LHACSVRFGLDGDL--SVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQN 238

Query: 254 NEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA 313
                 + L+ +M    + P  +T++ ++  C  +G    G+ +   I  +GF F+  + 
Sbjct: 239 GLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLK 298

Query: 314 NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVR 373
           NAL++MY +C  +  AR +FDGM  K+V+ W A+I+ Y      + A +LF  M  S   
Sbjct: 299 NALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDEL 358

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYR 432
           P+    V +LS C+ AG  E G +  T +E+  GL+      + +VD+  + G +  A +
Sbjct: 359 PDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARK 418

Query: 433 LF-SEAIYRDICMWNAMMAGYGMH 455
           L  S ++  D  +W A++    +H
Sbjct: 419 LIGSMSVEPDGAVWGALLGACKIH 442



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 183/361 (50%), Gaps = 13/361 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           YN+L+  Y  N++ S A+ ++  MRK G  V+  T+  ++  CA  +    G  +H  ++
Sbjct: 127 YNALIAGYSLNSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSV 186

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + GLDGD  V N L+ MY  CGS+  AR LFD MP + +++W+ MI GY + GL    L+
Sbjct: 187 RFGLDGDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLD 246

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R+M F  I P  V ++ ++S  A +     G+ +   +            +  ALI+M
Sbjct: 247 LYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRI--ELSGFGFNPFLKNALINM 304

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y++CGNL  A+ +F+ + + +V+SWT +I+GY    +    V+LF EMI  +  P     
Sbjct: 305 YARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAF 364

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           +S++  C   G  + G +    + R+ G +      + +VD+ G+   +  AR L   M 
Sbjct: 365 VSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMS 424

Query: 338 -SKDVMIWNAVISA---YAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS-LCTEAGAL 392
              D  +W A++ A   +      + AFE     KV +  P  +    LLS + +EAG +
Sbjct: 425 VEPDGAVWGALLGACKIHRNVELAELAFE-----KVIEFEPTNIGYYVLLSNIFSEAGNM 479

Query: 393 E 393
           E
Sbjct: 480 E 480



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 118/243 (48%), Gaps = 7/243 (2%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N++++ Y +N      L++Y  M   G   D  T+  +L +CA +     G+E+  
Sbjct: 225 LITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQ 284

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
               +G   + ++ NALI MY+ CG+LV AR +FD M  ++V+SW+ +I GY   G  E 
Sbjct: 285 RIELSGFGFNPFLKNALINMYARCGNLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGEL 344

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+++  EM   D  P   A +S++S  +     + G      + R+   +  G    + +
Sbjct: 345 AVQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQP-GPEHYSCV 403

Query: 216 IDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           +D+  + G L  A++L   ++ +     W  ++     C +I+  V L AE+  E V   
Sbjct: 404 VDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGA---C-KIHRNVEL-AELAFEKVIEF 458

Query: 275 EIT 277
           E T
Sbjct: 459 EPT 461


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 189/603 (31%), Positives = 323/603 (53%), Gaps = 15/603 (2%)

Query: 37  TRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGF 96
           T +  ++ ++    + S AL+++  M   G   D  T+ T+L      +       +H F
Sbjct: 106 TTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-----PSLHPF 160

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
           AIK GLD   +V N L+  Y + G L +AR +F EM ++D V+++ M+ G  + GL  +A
Sbjct: 161 AIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQA 220

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           L++   MR   I  +     S++++ A +A + LG  +HA V+R+     L V +  +L+
Sbjct: 221 LQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRST--SVLNVFVNNSLL 278

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM----IEENVF 272
           D YSKC  L   ++LF+ + +   VS+ V+I+ Y         +RLF EM     +  V 
Sbjct: 279 DFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVL 338

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P   T+LS+    G +  + +GK +HA ++  G      + NAL+DMY KC  + +A++ 
Sbjct: 339 PYA-TMLSV---AGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSN 394

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F     K  + W A+I+ Y Q    ++A +LF  M+ + +RP+  T   ++   +    +
Sbjct: 395 FSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMI 454

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
            +G+ LH+Y+ + G +  V   + LVDMYAKCG ++ A R F E   R+   WNA+++ Y
Sbjct: 455 GLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAY 514

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             +G  + A+  F  M   G  P+ +TF+ +L ACSH GL  E    F  M H   + P 
Sbjct: 515 AHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPW 574

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
            EHY C++D LGR G   +  +M+  MP + + I+W ++L + ++H N  +  +AA ++ 
Sbjct: 575 KEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLF 634

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
            +EP +    V++SNIYA A +W D A V+++M++  V+KE G+S VE+   ++ F    
Sbjct: 635 GMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASND 694

Query: 633 MVN 635
           + +
Sbjct: 695 LTS 697



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 218/445 (48%), Gaps = 9/445 (2%)

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
           N ++  YS  G L +A++LF   P+R+  +W+ M+R +   G   +AL + R M    + 
Sbjct: 78  NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 137

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           P  V + ++++L           ++H   ++   D    V +   L+D Y K G LA A+
Sbjct: 138 PDRVTVTTVLNLPGCTV-----PSLHPFAIKFGLDTH--VFVCNTLLDAYCKHGLLAAAR 190

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           ++F  ++    V++  M+ G  +     + ++LFA M    +  +  T  S++     + 
Sbjct: 191 RVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMA 250

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
            L LG  +HA +LR+    ++ + N+L+D Y KC  +   R LFD M  +D + +N +I+
Sbjct: 251 HLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIA 310

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
           AYA   C      LF  M+        +    +LS+      + +GK +H  +   GL  
Sbjct: 311 AYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLAS 370

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           + +L  AL+DMY+KCG ++ A   FS    +    W A++ GY  +G  EEAL  F DM 
Sbjct: 371 EDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMR 430

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
           R+G++P+  TF  ++ A S   ++  G+ +   ++   G    +     +VD+  + G L
Sbjct: 431 RAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAKCGCL 489

Query: 530 DEAHEMIKSMPLRPNMIVWGALLAA 554
           DEA      MP R N I W A+++A
Sbjct: 490 DEALRTFDEMPER-NSISWNAVISA 513



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 88/378 (23%), Positives = 156/378 (41%), Gaps = 57/378 (15%)

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA---- 352
           L A +++ GF+      N  +        +  AR +FD M  K++   N ++SAY+    
Sbjct: 30  LDARMVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGD 89

Query: 353 -----------------------QAHC----IDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
                                  +AH        A  LF  M    V P+ VT+  +L+L
Sbjct: 90  LPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNL 149

Query: 386 --CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
             CT          LH +  K GL+  V +   L+D Y K G +  A R+F E   +D  
Sbjct: 150 PGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAV 202

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            +NAMM G    G   +AL  F  M R+G+     TF  +L   +    +  G  V   +
Sbjct: 203 TYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALV 262

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
           +    ++  +     ++D   +   LD+   +   MP R N + +  ++AA       + 
Sbjct: 263 LRSTSVL-NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDN-VSYNVIIAAY------AW 314

Query: 564 GEIAATQI-LEIEPQNYGYN---VLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
            + AAT + L  E Q  G++   +  + + +VA    DV   +++  ++ +    G +S 
Sbjct: 315 NQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLL---GLASE 371

Query: 620 EV--NGLVHKFIRGGMVN 635
           ++  N L+  + + GM++
Sbjct: 372 DLLGNALIDMYSKCGMLD 389


>gi|356495279|ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
           mitochondrial-like [Glycine max]
          Length = 944

 Score =  339 bits (870), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 191/602 (31%), Positives = 331/602 (54%), Gaps = 28/602 (4%)

Query: 33  INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGK 91
           +  +  +N+++  +  N K     ++   M+K G  + D  T+ T+L  CA+++++  G+
Sbjct: 356 LKDIVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQPDIVTLITLLPLCAELMLSREGR 415

Query: 92  EIHGFAIKNGLDGD-AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
            IHG+AI+  +  D   + N+LI MYS+C  +  A  LF+    +D VSW+ MI GY   
Sbjct: 416 TIHGYAIRRQMISDHVMLLNSLIGMYSKCNLVEKAELLFNSTAEKDTVSWNAMISGYSHN 475

Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLF--ADVADVDLGKAIHACVVRNCKDEKLG 208
              EEA  +  EM       S   + +++S     ++  +  GK++H      C   K G
Sbjct: 476 RYSEEAQNLFTEMLRWGPNCSSSTVFAILSSCNSLNINSIHFGKSVH------CWQLKSG 529

Query: 209 ----VAIATALIDMYSKCGNLAYAKQLFNRLNQNS----VVSWTVMISGYIRCNEINEGV 260
               + +   L+ MY  CG+L  +   F+ L++NS    + SW  +I G +RC+   E +
Sbjct: 530 FLNHILLINILMHMYINCGDLTAS---FSILHENSALADIASWNTLIVGCVRCDHFREAL 586

Query: 261 RLFAEMIEENVFPSE-ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
             F  M +E     + IT++S +  C  +    LGK LH   +++       + N+L+ M
Sbjct: 587 ETFNLMRQEPPLNYDSITLVSALSACANLELFNLGKSLHGLTVKSPLGSDTRVQNSLITM 646

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
           Y +CR+I SA+ +F    + ++  WN +ISA +      +A ELF++++     PNE+T+
Sbjct: 647 YDRCRDINSAKVVFKFFSTPNLCSWNCMISALSHNRESREALELFLNLQF---EPNEITI 703

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
           +G+LS CT+ G L  GK +H ++ +  ++ +  +  AL+D+Y+ CG ++ A ++F  A  
Sbjct: 704 IGVLSACTQIGVLRHGKQVHAHVFRTCIQDNSFISAALIDLYSNCGRLDTALQVFRHAKE 763

Query: 440 RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           +    WN+M++ YG HG GE+A+  F +M  SG + +  TF+ LL+ACSH+GLV +G   
Sbjct: 764 KSESAWNSMISAYGYHGKGEKAIKLFHEMCESGARVSKSTFVSLLSACSHSGLVNQGLWF 823

Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK 559
           ++ M+   G+ P+ EH   +VD+LGR+G LDEA+E  K         VWGALL+A   H 
Sbjct: 824 YECMLERYGVQPETEHQVYVVDMLGRSGRLDEAYEFAKGCDSSG---VWGALLSACNYHG 880

Query: 560 NPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
              +G+  A  + ++EPQN G+ + +SN+Y  A  W D   +R+ ++++ ++K  G+S V
Sbjct: 881 ELKLGKKIAQYLFQLEPQNVGHYISLSNMYVAAGSWKDATELRQSIQDLGLRKTAGYSLV 940

Query: 620 EV 621
           +V
Sbjct: 941 DV 942



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 268/545 (49%), Gaps = 13/545 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N++V + ++N     A++ +  M K  +  D+ T+  I+ A   +     G+ IH  +I
Sbjct: 160 WNAIVAASLENKCYRIAMDFFDKMIKAQTGFDSTTLLLIVSASLHMKNFDQGRAIHCVSI 219

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K+G+  D  + NAL+ MY++CG L S+  L++E+  +D VSW++++RG      PE+AL 
Sbjct: 220 KSGMLVDISLGNALVDMYAKCGDLSSSECLYEEIECKDAVSWNSIMRGSLYNRHPEKALC 279

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
             + M F +     V++   +S  + + ++  G+++H   ++     K  V++A +LI +
Sbjct: 280 YFKRMSFSEETADNVSLCCAISASSSLGELSFGQSVHGLGIK--LGYKSHVSVANSLISL 337

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF-PSEIT 277
           YS+C ++  A+ LF  +    +VSW  M+ G+    +I E   L  +M +   F P  +T
Sbjct: 338 YSQCEDIKAAETLFREIALKDIVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQPDIVT 397

Query: 278 ILSLIIECGFVGGLQLGKWLHAY-ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
           +++L+  C  +   + G+ +H Y I R      + + N+L+ MY KC  +  A  LF+  
Sbjct: 398 LITLLPLCAELMLSREGRTIHGYAIRRQMISDHVMLLNSLIGMYSKCNLVEKAELLFNST 457

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE--AGALEM 394
             KD + WNA+IS Y+     ++A  LF  M       +  T+  +LS C      ++  
Sbjct: 458 AEKDTVSWNAMISGYSHNRYSEEAQNLFTEMLRWGPNCSSSTVFAILSSCNSLNINSIHF 517

Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYG 453
           GK +H +  K G    ++L   L+ MY  CGD+  ++ +  E +   DI  WN ++ G  
Sbjct: 518 GKSVHCWQLKSGFLNHILLINILMHMYINCGDLTASFSILHENSALADIASWNTLIVGCV 577

Query: 454 MHGCGEEALIFFVDM-ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG-LGLVP 511
                 EAL  F  M +   +  + IT +  L+AC++  L   GKS+    V   LG   
Sbjct: 578 RCDHFREALETFNLMRQEPPLNYDSITLVSALSACANLELFNLGKSLHGLTVKSPLGSDT 637

Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
           ++++   ++ +  R   ++ A  + K     PN+  W  +++A   H   S   +     
Sbjct: 638 RVQN--SLITMYDRCRDINSAKVVFKFFS-TPNLCSWNCMISALS-HNRESREALELFLN 693

Query: 572 LEIEP 576
           L+ EP
Sbjct: 694 LQFEP 698



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 152/595 (25%), Positives = 279/595 (46%), Gaps = 50/595 (8%)

Query: 65  NGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVS 124
           +G E+ +F +   +K C +          H  A+K G       S +L+ +YS+ G   S
Sbjct: 86  HGREI-HFELVDYIKLCLKKPKIVTATVAHCAALKIGALAHLPTSTSLLTIYSKAGDFTS 144

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           ++ LFDE+ NRD ++W+ ++           A++   +M           ++ +VS    
Sbjct: 145 SKGLFDEIQNRDAIAWNAIVAASLENKCYRIAMDFFDKMIKAQTGFDSTTLLLIVSASLH 204

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
           + + D G+AIH   +++     + +++  AL+DMY+KCG+L+ ++ L+  +     VSW 
Sbjct: 205 MKNFDQGRAIHCVSIKS--GMLVDISLGNALVDMYAKCGDLSSSECLYEEIECKDAVSWN 262

Query: 245 VMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN 304
            ++ G +      + +  F  M         +++   I     +G L  G+ +H   ++ 
Sbjct: 263 SIMRGSLYNRHPEKALCYFKRMSFSEETADNVSLCCAISASSSLGELSFGQSVHGLGIKL 322

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELF 364
           G++  +++AN+L+ +Y +C +I++A TLF  +  KD++ WNA++  +A    I + F+L 
Sbjct: 323 GYKSHVSVANSLISLYSQCEDIKAAETLFREIALKDIVSWNAMMEGFASNGKIKEVFDLL 382

Query: 365 IHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY-IEKQGLEVDVILKTALVDMYA 422
           + M KV   +P+ VT++ LL LC E      G+ +H Y I +Q +   V+L  +L+ MY+
Sbjct: 383 VQMQKVGFFQPDIVTLITLLPLCAELMLSREGRTIHGYAIRRQMISDHVMLLNSLIGMYS 442

Query: 423 KCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
           KC  V  A  LF+    +D   WNAM++GY  +   EEA   F +M R G   +  T   
Sbjct: 443 KCNLVEKAELLFNSTAEKDTVSWNAMISGYSHNRYSEEAQNLFTEMLRWGPNCSSSTVFA 502

Query: 483 LLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
           +L++C+   +       F K VH   L               ++G L+  H ++ ++ L 
Sbjct: 503 ILSSCNSLNI---NSIHFGKSVHCWQL---------------KSGFLN--HILLINI-LM 541

Query: 543 PNMIVWGALLAA-SKLHKNPSMGEIAATQILEI---------------------EPQNYG 580
              I  G L A+ S LH+N ++ +IA+   L +                      P NY 
Sbjct: 542 HMYINCGDLTASFSILHENSALADIASWNTLIVGCVRCDHFREALETFNLMRQEPPLNYD 601

Query: 581 YNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
              L+S + A AN   ++  + + +  + VK   G  +   N L+  + R   +N
Sbjct: 602 SITLVSALSACANL--ELFNLGKSLHGLTVKSPLGSDTRVQNSLITMYDRCRDIN 654



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 97/221 (43%), Gaps = 9/221 (4%)

Query: 348 ISAYAQA-----HCIDKAFELFIHMKVSKVRPNEV--TMVGLLSLCTEAGALEMGKWLHT 400
           I+ YA A     HC     +LF  M    +   E+   +V  + LC +   +      H 
Sbjct: 56  ITPYAPAMLSHCHCFCSVIQLFDEMPQRYIHGREIHFELVDYIKLCLKKPKIVTATVAHC 115

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
              K G    +   T+L+ +Y+K GD   +  LF E   RD   WNA++A    + C   
Sbjct: 116 AALKIGALAHLPTSTSLLTIYSKAGDFTSSKGLFDEIQNRDAIAWNAIVAASLENKCYRI 175

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMV 520
           A+ FF  M ++    +  T + +++A  H     +G+++    +   G++  I     +V
Sbjct: 176 AMDFFDKMIKAQTGFDSTTLLLIVSASLHMKNFDQGRAIHCVSIKS-GMLVDISLGNALV 234

Query: 521 DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
           D+  + G L  +  + + +  + + + W +++  S  +++P
Sbjct: 235 DMYAKCGDLSSSECLYEEIECK-DAVSWNSIMRGSLYNRHP 274


>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 176/446 (39%), Positives = 263/446 (58%), Gaps = 35/446 (7%)

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           Y+  G L Y+  LF R    SV  WT +I G+       + +  +A+M+ + V P+  T 
Sbjct: 19  YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG----------------- 321
            S++  C     ++ GK LH+  ++ GF+  L +   L+D+Y                  
Sbjct: 79  SSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134

Query: 322 --------------KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
                         K  E+ +AR LFDGM+ +D + WN +I  Y Q    ++A  LF  M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
             +K +PNEVT++ +LS C + GALE G+W+H+YIE  G++ +V + TALVDMY+KCG +
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 254

Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
             A  +F +   +D+  WN+M+ GY M G  +EAL  F  M R G+ P  ITFIG+L+AC
Sbjct: 255 EDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSAC 314

Query: 488 SHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIV 547
            H+G VTEG  +F+KM    G+ PKIEHYGCMV+LLGRAG +++A+E++K+M + P+ ++
Sbjct: 315 GHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVL 374

Query: 548 WGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
           WG LL A +LH   ++GE     +++    N G  +L+SNIYA    W+ VA +R +MK+
Sbjct: 375 WGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKD 434

Query: 608 IRVKKEPGFSSVEVNGLVHKFIRGGM 633
             VKKEPG SS+EVN  VH+F+ GG+
Sbjct: 435 SGVKKEPGCSSIEVNNKVHEFLAGGL 460



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 203/419 (48%), Gaps = 48/419 (11%)

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
           + L + Y+  G L  +  LF    N  V  W+ +I G+   GL E+AL    +M    + 
Sbjct: 13  DKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVE 72

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           P+     S++ L      ++ GKA+H+  V+   D  L   + T L+D+Y++ G++  A+
Sbjct: 73  PNAFTFSSILKL----CPIEPGKALHSQAVKLGFDSDL--YVRTGLLDVYARGGDVVSAQ 126

Query: 230 QLFNRLNQNSVVS-------------------------------WTVMISGYIRCNEINE 258
           QLF+ + + S+VS                               W VMI GY +    NE
Sbjct: 127 QLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNE 186

Query: 259 GVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
            + LF  M++    P+E+T+LS++  CG +G L+ G+W+H+YI  NG +F++ +  ALVD
Sbjct: 187 ALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVD 246

Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
           MY KC  +  AR +FD +  KDV+ WN++I  YA      +A +LF  M    + P  +T
Sbjct: 247 MYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNIT 306

Query: 379 MVGLLSLCTEAGALEMGKW--LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
            +G+LS C  +G +  G W   +   ++ G+E  +     +V++  + G V  AY L   
Sbjct: 307 FIGILSACGHSGWVTEG-WDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKN 365

Query: 437 A-IYRDICMWNAMMAGYGMHG---CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAG 491
             I  D  +W  ++    +HG    GE+ +   VD   +    N  T+I L N  +  G
Sbjct: 366 MNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLA----NSGTYILLSNIYAAVG 420



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 187/411 (45%), Gaps = 71/411 (17%)

Query: 54  SALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALI 113
            ALN YA M   G E + FT  +ILK C        GK +H  A+K G D D YV   L+
Sbjct: 58  QALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLGFDSDLYVRTGLL 113

Query: 114 QMYSECGSLVSARYLFDEMPN-------------------------------RDVVSWST 142
            +Y+  G +VSA+ LFD MP                                RD V W+ 
Sbjct: 114 DVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNV 173

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
           MI GY + G+P EAL + R M     +P+EV ++S++S    +  ++ G+ +H+ +  N 
Sbjct: 174 MIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENN- 232

Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
              +  V + TAL+DMYSKCG+L  A+ +F++++   VV+W  MI GY       E ++L
Sbjct: 233 -GIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQL 291

Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
           F  M    + P+ IT + ++  CG  G +  G W               + N + D YG 
Sbjct: 292 FKSMCRMGLHPTNITFIGILSACGHSGWVTEG-W--------------DIFNKMKDEYGI 336

Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
             +I                 +  +++   +A  +++A+EL  +M    + P+ V    L
Sbjct: 337 EPKIEH---------------YGCMVNLLGRAGHVEQAYELVKNM---NIEPDPVLWGTL 378

Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           L  C   G + +G+ +   +  Q L  +      L ++YA  G+ +G  RL
Sbjct: 379 LGACRLHGKIALGEKIVELLVDQNL-ANSGTYILLSNIYAAVGNWDGVARL 428



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 127/245 (51%), Gaps = 8/245 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N ++  Y +N  P+ AL ++  M K  ++ +  T+ ++L AC Q+     G+ +H +  
Sbjct: 171 WNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIE 230

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            NG+  + +V  AL+ MYS+CGSL  AR +FD++ ++DVV+W++MI GY   G  +EAL+
Sbjct: 231 NNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQ 290

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE---KLGVAIATAL 215
           + + M  M + P+ +  I ++S       V  G  I        KDE   +  +     +
Sbjct: 291 LFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDI----FNKMKDEYGIEPKIEHYGCM 346

Query: 216 IDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
           +++  + G++  A +L   +N +   V W  ++       +I  G ++   ++++N+  S
Sbjct: 347 VNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANS 406

Query: 275 EITIL 279
              IL
Sbjct: 407 GTYIL 411


>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 170/387 (43%), Positives = 244/387 (63%), Gaps = 2/387 (0%)

Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
           SGY+R       + +++ M+ ++V P++ T   LI  C     ++ GK +HA++L+ GF 
Sbjct: 67  SGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFG 126

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKD--VMIWNAVISAYAQAHCIDKAFELFI 365
                 N L+ MY   + +  AR +FD M  +D   + WNA+I+AY Q++ + +AF LF 
Sbjct: 127 ADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFD 186

Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
            M++  V  ++     +LS CT  GALE GKW+H YIEK G+E+D  L T ++DMY KCG
Sbjct: 187 RMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCG 246

Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
            +  A  +F+E   + I  WN M+ G  MHG GE A+  F +MER  V P+GITF+ +L+
Sbjct: 247 CLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLS 306

Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
           AC+H+GLV EGK  F  M   LGL P +EH+GCMVDLLGRAGLL+EA ++I  MP+ P+ 
Sbjct: 307 ACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDA 366

Query: 546 IVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVM 605
            V GAL+ A ++H N  +GE    +++E+EP N G  VL++N+YA A RW DVA VR++M
Sbjct: 367 GVLGALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLM 426

Query: 606 KEIRVKKEPGFSSVEVNGLVHKFIRGG 632
            +  VKK PGFS +E    V +FI GG
Sbjct: 427 NDRGVKKAPGFSMIESESGVDEFIAGG 453



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 164/347 (47%), Gaps = 8/347 (2%)

Query: 9   NLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTS-YIKNNKPSSALNIYAFMRKNGS 67
            + + +Q H+ II+     +  + +  + ++ ++  S Y++     + + +Y+ M     
Sbjct: 32  TMAELKQYHSQIIRLGLS-ADNDAMGRVIKFCAISKSGYLRWQLARNCIFMYSRMLHKSV 90

Query: 68  EVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARY 127
             + FT P +++AC        GK+IH   +K G   D +  N LI MY    SL  AR 
Sbjct: 91  SPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARR 150

Query: 128 LFDEMPNRD--VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV 185
           +FD MP RD   VSW+ MI  Y +     EA  +   MR  ++   +    SM+S    +
Sbjct: 151 VFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGL 210

Query: 186 ADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
             ++ GK IH  + ++  +  L   +AT +IDMY KCG L  A ++FN L Q  + SW  
Sbjct: 211 GALEQGKWIHGYIEKSGIE--LDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNC 268

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN- 304
           MI G     +    + LF EM  E V P  IT ++++  C   G ++ GK    Y+    
Sbjct: 269 MIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVL 328

Query: 305 GFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
           G +  +     +VD+ G+   +  AR L + M  + D  +  A++ A
Sbjct: 329 GLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGA 375



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 152/322 (47%), Gaps = 14/322 (4%)

Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           GY R  L    + +   M    + P++     ++        ++ GK IHA V+      
Sbjct: 68  GYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVL------ 121

Query: 206 KLGVAIA----TALIDMYSKCGNLAYAKQLFNRLNQN--SVVSWTVMISGYIRCNEINEG 259
           K G          LI MY    +L  A+++F+ + Q   + VSW  MI+ Y++ N ++E 
Sbjct: 122 KFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEA 181

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
             LF  M  ENV   +    S++  C  +G L+ GKW+H YI ++G E    +A  ++DM
Sbjct: 182 FALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDM 241

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
           Y KC  +  A  +F+ +  K +  WN +I   A     + A ELF  M+   V P+ +T 
Sbjct: 242 YCKCGCLEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITF 301

Query: 380 VGLLSLCTEAGALEMGKWLHTYI-EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-A 437
           V +LS C  +G +E GK    Y+ E  GL+  +     +VD+  + G +  A +L +E  
Sbjct: 302 VNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMP 361

Query: 438 IYRDICMWNAMMAGYGMHGCGE 459
           +  D  +  A++    +HG  E
Sbjct: 362 VNPDAGVLGALVGACRIHGNTE 383


>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 182/448 (40%), Positives = 262/448 (58%), Gaps = 35/448 (7%)

Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLI 282
           G+L YA+ +FN++   +  +   +I GY   N   + +  +  M+ + + P   T  SL 
Sbjct: 26  GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLF 85

Query: 283 IECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVM 342
             CG    L  GK LH +  + GF     + N L++MY  C  + SAR +FD M +K V+
Sbjct: 86  KSCGV---LCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVV 142

Query: 343 IWNAVISAYAQ----------------------------AHCIDKAFE----LFIHMKVS 370
            W  +I AYAQ                             H  D  +E    LF  M++S
Sbjct: 143 SWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLS 202

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
            V+ ++VTM  LL  CT  GALE+GKWLH YIEK+ +EVDV L TALVDMYAKCG +  A
Sbjct: 203 GVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESA 262

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHA 490
            R+F E   +D+  W A++ G  M G G +AL  F +M+ S VKP+ ITF+G+L ACSHA
Sbjct: 263 MRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHA 322

Query: 491 GLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           GLV EG + F+ M +  G+ P IEHYGCMVD+LGRAG + EA ++I++MP+ P+  V   
Sbjct: 323 GLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVG 382

Query: 551 LLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRV 610
           LL+A ++H N  + E AA Q++E++P+N G  VL+SNIY+    W     +R +M E  +
Sbjct: 383 LLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNI 442

Query: 611 KKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
           KK PG S++EV G+VH+F++G + + +S
Sbjct: 443 KKPPGCSAIEVGGVVHEFVKGDVSHPQS 470



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 176/353 (49%), Gaps = 46/353 (13%)

Query: 118 ECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMIS 177
           + GSL  AR +F+++PN    + +++IRGY    LP +A+   + M    + P      +
Sbjct: 24  DSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDR---FT 80

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFN 233
             SLF     +  GK +H      C   KLG A    I   L++MYS CG L  A+++F+
Sbjct: 81  FPSLFKSCGVLCEGKQLH------CHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFD 134

Query: 234 RLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM-IEENVF-------------------- 272
           ++   SVVSW  MI  Y + +  +E ++LF  M I  N+F                    
Sbjct: 135 KMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALS 194

Query: 273 -----------PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
                        ++T+ SL+I C  +G L+LGKWLH YI +   E  +A+  ALVDMY 
Sbjct: 195 LFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYA 254

Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
           KC  I SA  +F  M  KDVM W A+I   A      KA ELF  M++S+V+P+ +T VG
Sbjct: 255 KCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVG 314

Query: 382 LLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           +L+ C+ AG +  G  + ++   K G++  +     +VDM  + G +  A  L
Sbjct: 315 VLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDL 367



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 176/360 (48%), Gaps = 40/360 (11%)

Query: 26  KFSYTNIINPLT-RYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV 84
           +  +  I NP T   NS++  Y   N P  A+  Y  M   G + D FT P++ K+C  +
Sbjct: 32  RLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVL 91

Query: 85  LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
                GK++H  + K G   DAY+ N L+ MYS CG LVSAR +FD+M N+ VVSW+TMI
Sbjct: 92  CE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMI 148

Query: 145 RGYHRGGLP--------------------------------EEALEVMREMRFMDIRPSE 172
             Y +  LP                                EEAL +  EM+   ++  +
Sbjct: 149 GAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDK 208

Query: 173 VAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLF 232
           V M S++     +  ++LGK +H  + +  +  ++ VA+ TAL+DMY+KCG++  A ++F
Sbjct: 209 VTMASLLIACTHLGALELGKWLHVYIEK--EKIEVDVALGTALVDMYAKCGSIESAMRVF 266

Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQ 292
             + +  V++WT +I G   C +  + + LF EM    V P  IT + ++  C   G + 
Sbjct: 267 QEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVN 326

Query: 293 LG-KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVISA 350
            G  + ++   + G + S+     +VDM G+   I  A  L   M  + D  +   ++SA
Sbjct: 327 EGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSA 386


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 174/508 (34%), Positives = 300/508 (59%), Gaps = 6/508 (1%)

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           A  +FD+MP R++V+W+ MI  + + G   +A+++  +M      P      S++S   +
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC---GNLAYAKQLFNRLNQNSVV 241
           +  + LGK +H+ V+R      L V +  +L+DMY+KC   G++  ++++F ++ +++V+
Sbjct: 64  LGLLALGKQLHSRVIR--LGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 121

Query: 242 SWTVMISGYIRCNEIN-EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           SWT +I+ Y +  E + E + LF +MI  ++ P+  +  S++  CG +     G+ +++Y
Sbjct: 122 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 181

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
            ++ G      + N+L+ MY +   +  AR  FD +  K+++ +NA++  YA+    ++A
Sbjct: 182 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 241

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
           F LF  +  + +  +  T   LLS     GA+  G+ +H  + K G + +  +  AL+ M
Sbjct: 242 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 301

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           Y++CG++  A+++F+E   R++  W +M+ G+  HG    AL  F  M  +G KPN IT+
Sbjct: 302 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 361

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
           + +L+ACSH G+++EG+  F+ M    G+VP++EHY CMVDLLGR+GLL EA E I SMP
Sbjct: 362 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 421

Query: 541 LRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAG 600
           L  + +VW  LL A ++H N  +G  AA  ILE EP +    +L+SN++A A +W DV  
Sbjct: 422 LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVK 481

Query: 601 VRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           +R+ MKE  + KE G S +EV   VH+F
Sbjct: 482 IRKSMKERNLIKEAGCSWIEVENRVHRF 509



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 231/434 (53%), Gaps = 16/434 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +  ++T + +      A++++  M  +G   D FT  ++L AC ++ +  LGK++H 
Sbjct: 16  LVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHS 75

Query: 96  FAIKNGLDGDAYVSNALIQMYSEC---GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG- 151
             I+ GL  D  V  +L+ MY++C   GS+  +R +F++MP  +V+SW+ +I  Y + G 
Sbjct: 76  RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGE 135

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA- 210
             +EA+E+  +M    IRP+  +  S++    +++D   G+ +++  V      KLG+A 
Sbjct: 136 CDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV------KLGIAS 189

Query: 211 ---IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
              +  +LI MY++ G +  A++ F+ L + ++VS+  ++ GY +  +  E   LF E+ 
Sbjct: 190 VNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIA 249

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
           +  +  S  T  SL+     +G +  G+ +H  +L+ G++ +  + NAL+ MY +C  I 
Sbjct: 250 DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIE 309

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           +A  +F+ M+ ++V+ W ++I+ +A+     +A E+F  M  +  +PNE+T V +LS C+
Sbjct: 310 AAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACS 369

Query: 388 EAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMW 445
             G +  G K  ++  ++ G+   +     +VD+  + G +  A     S  +  D  +W
Sbjct: 370 HVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVW 429

Query: 446 NAMMAGYGMHGCGE 459
             ++    +HG  E
Sbjct: 430 RTLLGACRVHGNTE 443



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 172/337 (51%), Gaps = 6/337 (1%)

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
           A A ++F+++ + ++V+WT+MI+ + +     + + LF +M      P   T  S++  C
Sbjct: 2   APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 61

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR---EIRSARTLFDGMKSKDVM 342
             +G L LGK LH+ ++R G    + +  +LVDMY KC     +  +R +F+ M   +VM
Sbjct: 62  TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 121

Query: 343 IWNAVISAYAQA-HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
            W A+I+AYAQ+  C  +A ELF  M    +RPN  +   +L  C        G+ +++Y
Sbjct: 122 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 181

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
             K G+     +  +L+ MYA+ G +  A + F     +++  +NA++ GY  +   EEA
Sbjct: 182 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 241

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVD 521
            + F ++  +G+  +  TF  LL+  +  G + +G+ +  +++ G G          ++ 
Sbjct: 242 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALIS 300

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +  R G ++ A ++   M  R N+I W +++     H
Sbjct: 301 MYSRCGNIEAAFQVFNEMEDR-NVISWTSMITGFAKH 336



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 19/255 (7%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  YN++V  Y KN K   A  ++  +   G  +  FT  ++L   A +     G++IHG
Sbjct: 222 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 281

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K G   +  + NALI MYS CG++ +A  +F+EM +R+V+SW++MI G+ + G    
Sbjct: 282 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR 341

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK-------AIHACVVRNCKDEKLG 208
           ALE+  +M     +P+E+  ++++S  + V  +  G+         H  V R        
Sbjct: 342 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR-------- 393

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
           +     ++D+  + G L  A +  N +      + W  ++ G  R +   E  R  AEMI
Sbjct: 394 MEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL-GACRVHGNTELGRHAAEMI 452

Query: 268 --EENVFPSEITILS 280
             +E   P+   +LS
Sbjct: 453 LEQEPDDPAAYILLS 467


>gi|224087027|ref|XP_002308034.1| predicted protein [Populus trichocarpa]
 gi|222854010|gb|EEE91557.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 180/568 (31%), Positives = 319/568 (56%), Gaps = 7/568 (1%)

Query: 66  GSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSA 125
           G + +  T   IL+AC+ +    LG++IHGF IK+G + + +V  +LI MYS  G+   A
Sbjct: 5   GEKFNEHTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEA 64

Query: 126 RYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV 185
             +F+ +  +D+   + MI  Y + G  + A+ V   +  + + P++    +++S     
Sbjct: 65  EKVFNGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIIS----T 120

Query: 186 ADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTV 245
            +V+ GK +H   V+      L  ++  A+I MY K G +  A ++F+ +N+ +++SWT 
Sbjct: 121 CNVEEGKQLHGLAVK--YGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTA 178

Query: 246 MISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
           +ISGY R     + V  F E+    V      + +++  C     L LG  +H  +++ G
Sbjct: 179 LISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKNLDLGTQIHGLVIKLG 238

Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
           +   + +  AL+D+Y KC+  +SART+F+G+  +    +NA++  + +    ++   +F+
Sbjct: 239 YPCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVFL 298

Query: 366 -HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC 424
             ++++ ++P+ V+   LLSL     +L  G+ LH Y  K G    + +  AL+ MYAKC
Sbjct: 299 SQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKC 358

Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
           G V  AY+ F+     D   WNA+++ Y +HG GE+AL+ + +ME  G  P+ IT + +L
Sbjct: 359 GIVEDAYQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQEMEEKGFTPDEITILVIL 418

Query: 485 NACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
            AC+++GL  +G  +F+ M    G+ P +EHY CMVDLLGRAG L +A ++I   P   +
Sbjct: 419 QACTYSGLSEDGLHLFNTMESKYGIQPLLEHYACMVDLLGRAGYLSQAMDIINRSPFSES 478

Query: 545 MIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRV 604
            ++W  L+   KL  + ++G++A+  +L++ P   G  VL+SNIYA     ++ + VR  
Sbjct: 479 TLLWRTLVNVCKLCGDLNLGKLASKHLLDLSPDEAGSYVLVSNIYAGEGMIDEASKVRTT 538

Query: 605 MKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
           MK++++ KE G S VE++ +VH F+  G
Sbjct: 539 MKDLKLSKEAGSSWVEIDNMVHYFVASG 566



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 167/329 (50%), Gaps = 12/329 (3%)

Query: 27  FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
           FS  N  N L  + +L++ Y +N     A++ +  +R  G E D+  + TIL  C++   
Sbjct: 165 FSVMNKKN-LISWTALISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECKN 223

Query: 87  THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
             LG +IHG  IK G   D  +  ALI +Y++C +  SAR +F+ +  R   S++ ++ G
Sbjct: 224 LDLGTQIHGLVIKLGYPCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILVG 283

Query: 147 Y-HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDE 205
           +       E+ +  + ++R   I+P  V+   ++SL A+ A +  G+ +HA  ++     
Sbjct: 284 FIENDSNEEDPMVFLSQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYSIKTGFAG 343

Query: 206 KLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
              ++++ ALI MY+KCG +  A Q FN ++ N  +SW  +IS Y    +  + + L+ E
Sbjct: 344 H--ISVSNALITMYAKCGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQGEKALLLYQE 401

Query: 266 MIEENVFPSEITILSLIIECGFVG----GLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
           M E+   P EITIL ++  C + G    GL L   + +   + G +  L     +VD+ G
Sbjct: 402 MEEKGFTPDEITILVILQACTYSGLSEDGLHLFNTMES---KYGIQPLLEHYACMVDLLG 458

Query: 322 KCREIRSARTLFDGMK-SKDVMIWNAVIS 349
           +   +  A  + +    S+  ++W  +++
Sbjct: 459 RAGYLSQAMDIINRSPFSESTLLWRTLVN 487



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 11/227 (4%)

Query: 39  YNSLVTSYIKNNKPSSALNIY-AFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +N+++  +I+N+       ++ + +R  G + D+ +   +L   A       G+ +H ++
Sbjct: 277 FNAILVGFIENDSNEEDPMVFLSQLRLAGIKPDSVSFSRLLSLSANRASLVKGRGLHAYS 336

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           IK G  G   VSNALI MY++CG +  A   F+ M   D +SW+ +I  Y   G  E+AL
Sbjct: 337 IKTGFAGHISVSNALITMYAKCGIVEDAYQAFNSMSANDCISWNAIISAYSLHGQGEKAL 396

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA----T 213
            + +EM      P E+ ++ ++      A    G +     + N  + K G+        
Sbjct: 397 LLYQEMEEKGFTPDEITILVILQ-----ACTYSGLSEDGLHLFNTMESKYGIQPLLEHYA 451

Query: 214 ALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEG 259
            ++D+  + G L+ A  + NR     S + W  +++    C ++N G
Sbjct: 452 CMVDLLGRAGYLSQAMDIINRSPFSESTLLWRTLVNVCKLCGDLNLG 498


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 181/592 (30%), Positives = 319/592 (53%), Gaps = 3/592 (0%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTIL-KACAQVLMTHLGKEIHGFA 97
           + SL++++        A+ ++  M  +G   D  T  +IL K   +      GK +H   
Sbjct: 84  WTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDEGKRVHSHI 143

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           ++ G +GD  V N +++MY +CG +  A  +FD + + +V SW+ +I  Y + G   E L
Sbjct: 144 MQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAYAQNGHCMEVL 203

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            ++  M    ++P      +++     V  ++  K +HA  + +   ++   A+ TALI+
Sbjct: 204 RLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDR-DAAVGTALIN 262

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           +Y KCG L  A  +F +++   +VSW+ MI+ + +  +    ++L   M  E V P+ +T
Sbjct: 263 LYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVT 322

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
            ++++     +   Q GK +HA I++ G+   + + +ALV MY     + +AR++F+  +
Sbjct: 323 FVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSR 382

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +DV+ W+++I+ Y+Q     +A  LF  M+V  V+PN VT V  +  C   GAL  G  
Sbjct: 383 ERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQ 442

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH  +   GL+ DV + TALV++Y KCG +  A  +F     +++  W ++   YG +G 
Sbjct: 443 LHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGH 502

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           G  +L     ME  G+KP+GI F+ +L +C++AG +++G   ++ M    G+ P +EH G
Sbjct: 503 GSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYYNLMTQDFGIAPAVEHCG 562

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
           CMVD+LGRAG L+ A ++I +M    ++  W  LL A K H + +    AA +I ++EP+
Sbjct: 563 CMVDILGRAGKLEAAEQLINTMKFESSL-AWMMLLTACKAHNDTARAARAAEKIFQLEPK 621

Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           N    VL+S+++  A  W      RR M    V++  G SS+E+   VH+F+
Sbjct: 622 NATPYVLLSSVFCAAGSWEAAEETRRRMDGRGVQRLLGRSSIEIGDRVHEFV 673



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 148/485 (30%), Positives = 258/485 (53%), Gaps = 11/485 (2%)

Query: 77  ILKACAQVLMTHLGKEIHGFAIKNGLDGD-----AYVSNALIQMYSECGSLVSARYLFDE 131
           IL AC+ +     GK +HG  ++  L  D     + + N +IQMY  CG    A  +FD 
Sbjct: 16  ILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDR 75

Query: 132 MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA-DVDL 190
           M +++VV+W+++I  +   G   +A+ + R+M    + P  +   S++  ++    ++D 
Sbjct: 76  MKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRERNLDE 135

Query: 191 GKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY 250
           GK +H+ +++   +      +   +++MY KCG++  A  +F+ +   +V SWT++I+ Y
Sbjct: 136 GKRVHSHIMQTGYEGDR--MVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIIIAAY 193

Query: 251 IRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH-AYILRNGFEFS 309
            +     E +RL + M +  V P   T  +++  C  VG L+  K LH A I   G +  
Sbjct: 194 AQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDRD 253

Query: 310 LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV 369
            A+  AL+++YGKC  +  A  +F  + +KD++ W+++I+A+AQ+     A +L + M +
Sbjct: 254 AAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDL 313

Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
             VRPN VT V +L   T   A + GK +H  I + G   DV L +ALV MY   G V  
Sbjct: 314 EGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVET 373

Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
           A  +F  +  RD+  W++M+AGY  +     AL  F +ME  GV+PN +TF+  ++AC+ 
Sbjct: 374 ARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAG 433

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
            G +  G  + ++ V  LGL   +     +V+L G+ G L+EA  +   M  + N++ W 
Sbjct: 434 VGALRRGTQLHER-VRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMK-KKNLLTWT 491

Query: 550 ALLAA 554
           ++  A
Sbjct: 492 SIAMA 496



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 214/406 (52%), Gaps = 9/406 (2%)

Query: 163 MRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC--KDEKLGVAI-ATALIDMY 219
           M   +I+    A  ++++  +D+  +  GK +H  V+R    +DE+   ++    +I MY
Sbjct: 1   MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60

Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            +CG    A  +F+R+   +VV+WT +IS +       + + LF +M+   V P  IT  
Sbjct: 61  LRCGCTDLALDVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFT 120

Query: 280 SLIIE-CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
           S++++  G    L  GK +H++I++ G+E    + N +V+MYGKC ++  A  +FD ++ 
Sbjct: 121 SILLKWSGRERNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQD 180

Query: 339 KDVMIWNAVISAYAQ-AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +V  W  +I+AYAQ  HC++    L   M  + V+P+  T   +L  CT  GALE  K 
Sbjct: 181 PNVFSWTIIIAAYAQNGHCME-VLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKI 239

Query: 398 LH-TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
           LH   I   GL+ D  + TAL+++Y KCG +  A+ +F +   +DI  W++M+A +   G
Sbjct: 240 LHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMIAAFAQSG 299

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             + A+   + M+  GV+PN +TF+ +L A +       GK +  ++V   G    +   
Sbjct: 300 QAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQA-GYSDDVCLT 358

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
             +V +    G ++ A  + +S   R +++ W +++A    +++P+
Sbjct: 359 SALVKMYCNWGWVETARSIFESSRER-DVVSWSSMIAGYSQNESPA 403



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 192/379 (50%), Gaps = 14/379 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           +  ++S++ ++ ++ +  SA+ +   M   G   +N T   +L+A   +     GKEIH 
Sbjct: 285 IVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHA 344

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             ++ G   D  +++AL++MY   G + +AR +F+    RDVVSWS+MI GY +   P  
Sbjct: 345 RIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPAR 404

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL + REM    ++P+ V  +S +   A V  +  G  +H  V   C      V +ATAL
Sbjct: 405 ALSLFREMEVDGVQPNSVTFVSAIDACAGVGALRRGTQLHERV--RCLGLDKDVPVATAL 462

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           +++Y KCG L  A+ +F  + + ++++WT +   Y +    +  ++L   M  + + P  
Sbjct: 463 VNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDG 522

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA----NALVDMYGKCREIRSART 331
           I  +++++ C + G  Q+ K LH Y L    +F +A A      +VD+ G+  ++ +A  
Sbjct: 523 IVFVAILVSCNYAG--QMSKGLHYYNLMTQ-DFGIAPAVEHCGCMVDILGRAGKLEAAEQ 579

Query: 332 LFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS--LCTEA 389
           L + MK +  + W  +++A  +AH  D A       K+ ++ P   T   LLS   C  A
Sbjct: 580 LINTMKFESSLAWMMLLTA-CKAHN-DTARAARAAEKIFQLEPKNATPYVLLSSVFCA-A 636

Query: 390 GALEMGKWLHTYIEKQGLE 408
           G+ E  +     ++ +G++
Sbjct: 637 GSWEAAEETRRRMDGRGVQ 655


>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1288

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 188/533 (35%), Positives = 296/533 (55%), Gaps = 34/533 (6%)

Query: 121  SLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVS 180
            +++ A  LF ++P   +  W+ MIRG+ +   P EA+     M    +  + +    ++ 
Sbjct: 745  NILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLK 804

Query: 181  LFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
              A +++V     +HA V++   D  L V+   ALI  Y+    L +A+++F+ +++  +
Sbjct: 805  ACARISNVSC-TTVHARVLKLGFDSDLFVS--NALIHGYAGFCELGFARKVFDEMSERDL 861

Query: 241  VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
            VSW  +I GY RC   +E + +F EM   +V    +T++ +++ C  +G   +   +  Y
Sbjct: 862  VSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEY 921

Query: 301  ILRNGFEFSLAMANALVDMYG-------------------------------KCREIRSA 329
            I  N  E  + + N L+DMYG                               K   + +A
Sbjct: 922  IEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAA 981

Query: 330  RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
            R LFD M  +DV+ W ++IS+Y+QA    KA  LF  M V+KV+P+E+T+  +LS C   
Sbjct: 982  RKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHI 1041

Query: 390  GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
            GAL++G+ +H YI K  +  D+ +  AL+DMY KCG V     +F E   RD   W +++
Sbjct: 1042 GALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVI 1101

Query: 450  AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
            AG  ++G  + AL  F  M R GV+P   TF+G+L AC+HAG+V +G   F+ M    GL
Sbjct: 1102 AGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGL 1161

Query: 510  VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
             P+++HYGC+VDLL R+G L  A+E IK MP+ P+++VW  LL+AS++H N  + EIA  
Sbjct: 1162 TPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLAEIATK 1221

Query: 570  QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
            ++LE +P N G  +L SN YA +NRW DV  +RR+M+E  V K    SSVE+N
Sbjct: 1222 KLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHKPSASSSVEIN 1274



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/462 (30%), Positives = 222/462 (48%), Gaps = 37/462 (8%)

Query: 29   YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
            +  I  P L+ +N ++  + + N+P  A+  Y  M       +N T P +LKACA++   
Sbjct: 753  FRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLKACARISNV 812

Query: 88   HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
                 +H   +K G D D +VSNALI  Y+    L  AR +FDEM  RD+VSW+++I GY
Sbjct: 813  SCTT-VHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDLVSWNSLICGY 871

Query: 148  HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
             R     E L V  EMR  D++   V M+ +V     + +  +  A+   +  N    ++
Sbjct: 872  GRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEEN--KVEV 929

Query: 208  GVAIATALIDM-------------------------------YSKCGNLAYAKQLFNRLN 236
             V +   LIDM                               Y K GNL  A++LF+ + 
Sbjct: 930  DVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMP 989

Query: 237  QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
               V+SWT MIS Y +  +  + VRLF EM+   V P EIT+ S++  C  +G L +G+ 
Sbjct: 990  HRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEA 1049

Query: 297  LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
            +H YI +      + + NAL+DMY KC  +    ++F+ M  +D + W +VI+  A    
Sbjct: 1050 VHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLAVNGS 1109

Query: 357  IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKT 415
             D A  LF  M    VRP   T VG+L  C  AG ++ G ++  +     GL  ++    
Sbjct: 1110 ADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYG 1169

Query: 416  ALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHG 456
             +VD+ ++ G++  AY       +  D+ +W  +++   +HG
Sbjct: 1170 CVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHG 1211


>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
 gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 186/561 (33%), Positives = 297/561 (52%), Gaps = 14/561 (2%)

Query: 77  ILKACAQVLMTHLGKEIHGFAI---KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
           +LK CA       G+ IHG  I   ++    D Y  N+LI +Y +CG  V AR +FD MP
Sbjct: 37  LLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARKVFDLMP 96

Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGK 192
            R+VVSW  M++GY   G   E L++ + M F D  RP+E     +    +    ++ GK
Sbjct: 97  ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRIEEGK 156

Query: 193 AIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
             H C +++      G+     +   L+ MYS C     A ++ + L    +  ++  +S
Sbjct: 157 QFHGCFLKS------GLMSHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALS 210

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
           GY+ C    EG  +   M +E++    IT LS +  C  +  L L + +H+ ++R GF  
Sbjct: 211 GYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGFNS 270

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
            +  + A+++MYGKC ++  A+ +FD   ++++++   ++ AY Q    ++A  LF  M 
Sbjct: 271 EVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSKMD 330

Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
             +V PNE T    L+   E   L+ G  LH  + K G    V++  ALV+MYAK G + 
Sbjct: 331 TKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIE 390

Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
            A + FS   +RDI  WN M+ G+  HG G E L  F  M  +G  PN ITFIG+L ACS
Sbjct: 391 DARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQACS 450

Query: 489 HAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
           H G V +G   F++++    + P ++HY C+V LL +AG+  +A + +++ P+  +++ W
Sbjct: 451 HVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAW 510

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
            ALL A  + +N  +G+  A   +   P + G  VL+SNI+A +  W  VA VR +M + 
Sbjct: 511 RALLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVRSLMNKR 570

Query: 609 RVKKEPGFSSVEVNGLVHKFI 629
            VKKEPG S + +    H F+
Sbjct: 571 GVKKEPGVSWIGIRNQTHVFL 591



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 197/385 (51%), Gaps = 4/385 (1%)

Query: 67  SEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSAR 126
           S  + F    + K+C+       GK+ HG  +K+GL    +V N L+ MYS C     A 
Sbjct: 132 SRPNEFVATVVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAI 191

Query: 127 YLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            + D++P  D+  +S+ + GY   G  +E  EV+R M   D+    +  +S + L +++ 
Sbjct: 192 RVLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLR 251

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
           D++L + IH+ +VR   + +  V  + A+I+MY KCG + YA+++F+  +  ++V  T +
Sbjct: 252 DLNLARQIHSRMVRLGFNSE--VEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTI 309

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           +  Y +     E + LF++M  + V P+E T    +     +  L+ G  LH  +L++G+
Sbjct: 310 MDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGY 369

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
              + + NALV+MY K   I  AR  F GM  +D++ WN +I  ++      +  E F  
Sbjct: 370 RNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDR 429

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
           M ++   PN +T +G+L  C+  G +E G  + +  ++K  ++ D+   T +V + +K G
Sbjct: 430 MMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAG 489

Query: 426 DVNGAYRLFSEA-IYRDICMWNAMM 449
               A      A I  D+  W A++
Sbjct: 490 MFKDAEDFMRTAPIEWDVVAWRALL 514



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 158/320 (49%), Gaps = 10/320 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L+ ++S ++ Y++         +   M K    +DN T  + L+ C+ +   +L ++IH 
Sbjct: 202 LSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHS 261

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             ++ G + +   S A+I MY +CG ++ A+ +FD    +++V  +T++  Y +    EE
Sbjct: 262 RMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEE 321

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           AL +  +M   ++ P+E      ++  A+++ +  G  +H  V+++    +  V +  AL
Sbjct: 322 ALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKS--GYRNHVMVGNAL 379

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
           ++MY+K G++  A++ F+ +    +V+W  MI G+       EG+  F  M+     P+ 
Sbjct: 380 VNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNR 439

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFD 334
           IT + ++  C  VG ++ G +    +++    +  L     +V +  K    + A    D
Sbjct: 440 ITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAE---D 496

Query: 335 GMKSK----DVMIWNAVISA 350
            M++     DV+ W A+++A
Sbjct: 497 FMRTAPIEWDVVAWRALLNA 516



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 102/216 (47%), Gaps = 3/216 (1%)

Query: 41  SLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKN 100
           +++ +Y ++     ALN+++ M       + +T    L + A++ +   G  +HG  +K+
Sbjct: 308 TIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKS 367

Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
           G      V NAL+ MY++ GS+  AR  F  M  RD+V+W+TMI G+   GL  E LE  
Sbjct: 368 GYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAF 427

Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
             M      P+ +  I ++   + V  V+ G      +++    +   +   T ++ + S
Sbjct: 428 DRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQP-DLQHYTCIVGLLS 486

Query: 221 KCGNLAYAKQLFNRLN-QNSVVSWTVMISG-YIRCN 254
           K G    A+        +  VV+W  +++  Y+R N
Sbjct: 487 KAGMFKDAEDFMRTAPIEWDVVAWRALLNACYVRRN 522


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 174/508 (34%), Positives = 300/508 (59%), Gaps = 6/508 (1%)

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           A  +FD+MP R++V+W+ MI  + + G   +A+++  +M      P      S++S   +
Sbjct: 9   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC---GNLAYAKQLFNRLNQNSVV 241
           +  + LGK +H+ V+R      L V +  +L+DMY+KC   G++  ++++F ++ +++V+
Sbjct: 69  LGLLALGKQLHSRVIR--LGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 126

Query: 242 SWTVMISGYIRCNEIN-EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAY 300
           SWT +I+ Y +  E + E + LF +MI  ++ P+  +  S++  CG +     G+ +++Y
Sbjct: 127 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 186

Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
            ++ G      + N+L+ MY +   +  AR  FD +  K+++ +NA++  YA+    ++A
Sbjct: 187 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 246

Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
           F LF  +  + +  +  T   LLS     GA+  G+ +H  + K G + +  +  AL+ M
Sbjct: 247 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISM 306

Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
           Y++CG++  A+++F+E   R++  W +M+ G+  HG    AL  F  M  +G KPN IT+
Sbjct: 307 YSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITY 366

Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
           + +L+ACSH G+++EG+  F+ M    G+VP++EHY CMVDLLGR+GLL EA E I SMP
Sbjct: 367 VAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMP 426

Query: 541 LRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAG 600
           L  + +VW  LL A ++H N  +G  AA  ILE EP +    +L+SN++A A +W DV  
Sbjct: 427 LMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVK 486

Query: 601 VRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           +R+ MKE  + KE G S +EV   VH+F
Sbjct: 487 IRKSMKERNLIKEAGCSWIEVENRVHRF 514



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 231/434 (53%), Gaps = 16/434 (3%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +  ++T + +      A++++  M  +G   D FT  ++L AC ++ +  LGK++H 
Sbjct: 21  LVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHS 80

Query: 96  FAIKNGLDGDAYVSNALIQMYSEC---GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG- 151
             I+ GL  D  V  +L+ MY++C   GS+  +R +F++MP  +V+SW+ +I  Y + G 
Sbjct: 81  RVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGE 140

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA- 210
             +EA+E+  +M    IRP+  +  S++    +++D   G+ +++  V      KLG+A 
Sbjct: 141 CDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV------KLGIAS 194

Query: 211 ---IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
              +  +LI MY++ G +  A++ F+ L + ++VS+  ++ GY +  +  E   LF E+ 
Sbjct: 195 VNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIA 254

Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
           +  +  S  T  SL+     +G +  G+ +H  +L+ G++ +  + NAL+ MY +C  I 
Sbjct: 255 DTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIE 314

Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
           +A  +F+ M+ ++V+ W ++I+ +A+     +A E+F  M  +  +PNE+T V +LS C+
Sbjct: 315 AAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACS 374

Query: 388 EAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMW 445
             G +  G K  ++  ++ G+   +     +VD+  + G +  A     S  +  D  +W
Sbjct: 375 HVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVW 434

Query: 446 NAMMAGYGMHGCGE 459
             ++    +HG  E
Sbjct: 435 RTLLGACRVHGNTE 448



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 172/337 (51%), Gaps = 6/337 (1%)

Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
           A A ++F+++ + ++V+WT+MI+ + +     + + LF +M      P   T  S++  C
Sbjct: 7   APAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSAC 66

Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR---EIRSARTLFDGMKSKDVM 342
             +G L LGK LH+ ++R G    + +  +LVDMY KC     +  +R +F+ M   +VM
Sbjct: 67  TELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 126

Query: 343 IWNAVISAYAQA-HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
            W A+I+AYAQ+  C  +A ELF  M    +RPN  +   +L  C        G+ +++Y
Sbjct: 127 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 186

Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
             K G+     +  +L+ MYA+ G +  A + F     +++  +NA++ GY  +   EEA
Sbjct: 187 AVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEA 246

Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVD 521
            + F ++  +G+  +  TF  LL+  +  G + +G+ +  +++ G G          ++ 
Sbjct: 247 FLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALIS 305

Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +  R G ++ A ++   M  R N+I W +++     H
Sbjct: 306 MYSRCGNIEAAFQVFNEMEDR-NVISWTSMITGFAKH 341



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 123/255 (48%), Gaps = 19/255 (7%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  YN++V  Y KN K   A  ++  +   G  +  FT  ++L   A +     G++IHG
Sbjct: 227 LVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHG 286

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
             +K G   +  + NALI MYS CG++ +A  +F+EM +R+V+SW++MI G+ + G    
Sbjct: 287 RLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR 346

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK-------AIHACVVRNCKDEKLG 208
           ALE+  +M     +P+E+  ++++S  + V  +  G+         H  V R        
Sbjct: 347 ALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPR-------- 398

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
           +     ++D+  + G L  A +  N +      + W  ++ G  R +   E  R  AEMI
Sbjct: 399 MEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLL-GACRVHGNTELGRHAAEMI 457

Query: 268 --EENVFPSEITILS 280
             +E   P+   +LS
Sbjct: 458 LEQEPDDPAAYILLS 472


>gi|297814598|ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321020|gb|EFH51441.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 165/435 (37%), Positives = 265/435 (60%), Gaps = 3/435 (0%)

Query: 203 KDEKLGVAIATALIDMYSKC---GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
           K  +  V+  T LI+  ++     +++YA+ LF+ +++  +V +  +  GY R     E 
Sbjct: 56  KSHQEDVSFNTKLINFCTESPTESSMSYARHLFDAMSEPDIVIFNSIARGYSRSTNPLEV 115

Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
             LF E++E+++ P   T  SL+  C     L+ G+ LH   ++ G + ++ +   L++M
Sbjct: 116 FNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGVDDNVYVCPTLINM 175

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
           Y +C ++ +AR +FD +    V+ +NA+I+ YA+ +  ++A  LF  M+   ++PNE+T+
Sbjct: 176 YTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKNLKPNEITL 235

Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
           + +LS C   G+L++GKW+H Y +K G    V + TAL+DM+AKCG ++ A  +F    Y
Sbjct: 236 LSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCGSLDDAVSIFENMRY 295

Query: 440 RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
           +D   W+AM+  Y  HG  E +++ F  M    V+P+ ITF+GLLNACSH GLV EG+  
Sbjct: 296 KDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLNACSHTGLVEEGREY 355

Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK 559
           F  MVH  G+VP I+HYG MVDLLGRAG L++A+E I  +P+ P  ++W  LLAA   H 
Sbjct: 356 FSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTPMLWRILLAACSSHN 415

Query: 560 NPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
           N  + E  + +ILE++  + G  V++SN+YA   +W  V  +R+VMK+ +  K PG SS+
Sbjct: 416 NLELAEKVSERILELDDSHGGDYVILSNLYARNKKWEAVDSLRKVMKDRKAVKVPGCSSI 475

Query: 620 EVNGLVHKFIRGGMV 634
           EVN +VH+F  G  V
Sbjct: 476 EVNNVVHEFFSGDGV 490



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 199/374 (53%), Gaps = 16/374 (4%)

Query: 92  EIHGFAIKNGLDGDAYVSNALIQMYSEC---GSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           +I  +AIK+  + D   +  LI   +E     S+  AR+LFD M   D+V ++++ RGY 
Sbjct: 49  QIQAYAIKSHQE-DVSFNTKLINFCTESPTESSMSYARHLFDAMSEPDIVIFNSIARGYS 107

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
           R   P E   +  E+   D+ P      S++   A    ++ G+ +H      C   KLG
Sbjct: 108 RSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLH------CLSMKLG 161

Query: 209 VA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
           V     +   LI+MY++C ++  A+ +F+R+ +  VV +  MI+GY R N  NE + LF 
Sbjct: 162 VDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFR 221

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
           EM  +N+ P+EIT+LS++  C  +G L LGKW+H Y  ++GF   + +  AL+DM+ KC 
Sbjct: 222 EMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCKYVKVNTALIDMFAKCG 281

Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
            +  A ++F+ M+ KD   W+A+I AYA     + +  +F  M+   V+P+E+T +GLL+
Sbjct: 282 SLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEITFLGLLN 341

Query: 385 LCTEAGALEMGKWLHTY-IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDI 442
            C+  G +E G+   ++ + + G+   +    ++VD+  + G +  AY    +  I    
Sbjct: 342 ACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDKLPISPTP 401

Query: 443 CMWNAMMAGYGMHG 456
            +W  ++A    H 
Sbjct: 402 MLWRILLAACSSHN 415



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 100/316 (31%), Positives = 171/316 (54%), Gaps = 8/316 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +NS+   Y ++  P    N++  + ++    DN+T P++LKACA       G+++H  ++
Sbjct: 99  FNSIARGYSRSTNPLEVFNLFVEILEDDLLPDNYTFPSLLKACAVAKALEEGRQLHCLSM 158

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K G+D + YV   LI MY+EC  + +AR +FD +    VV ++ MI GY R   P EAL 
Sbjct: 159 KLGVDDNVYVCPTLINMYTECEDVDAARCVFDRIVEPCVVCYNAMITGYARRNRPNEALS 218

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALI 216
           + REM+  +++P+E+ ++S++S  A +  +DLGK IH    ++  CK     V + TALI
Sbjct: 219 LFREMQGKNLKPNEITLLSVLSSCALLGSLDLGKWIHEYAKKHGFCK----YVKVNTALI 274

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
           DM++KCG+L  A  +F  +      +W+ MI  Y    +    + +F  M  ENV P EI
Sbjct: 275 DMFAKCGSLDDAVSIFENMRYKDTQAWSAMIVAYANHGQAENSMLMFERMRSENVQPDEI 334

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           T L L+  C   G ++ G+   ++++   G   S+    ++VD+ G+   +  A    D 
Sbjct: 335 TFLGLLNACSHTGLVEEGREYFSWMVHEFGIVPSIKHYGSMVDLLGRAGHLEDAYEFIDK 394

Query: 336 MK-SKDVMIWNAVISA 350
           +  S   M+W  +++A
Sbjct: 395 LPISPTPMLWRILLAA 410


>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g06145-like [Cucumis sativus]
          Length = 600

 Score =  339 bits (869), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 201/609 (33%), Positives = 319/609 (52%), Gaps = 61/609 (10%)

Query: 25  FKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQV 84
           F F  TN +  LTR    + +++  + PS ++ +    R +  +    T+   +K C+ +
Sbjct: 2   FSFVTTNALKQLTRS---IGNFV--SPPSISMPLQPPSRPSFKQ----TLLNRIKNCSTI 52

Query: 85  LMTHLGKEIHGFA---IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWS 141
                  E+HG     IK     D ++ +  I       S+    + F +M N +V  ++
Sbjct: 53  ------NELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENPNVFVYN 106

Query: 142 TMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR 200
            MI+G+   G P  AL+    M    ++ P+     S+V     +  V+LG+ +H  + +
Sbjct: 107 AMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHIWK 166

Query: 201 NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
              +  L V   TAL+D YSK   L+ A+++F+ + +    +WT M+S   R  +++   
Sbjct: 167 KGFESHLFVQ--TALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSALARVGDMDSAR 224

Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
           +LF EM E N                         W                 N ++D Y
Sbjct: 225 KLFEEMPERNT----------------------ATW-----------------NTMIDGY 245

Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
            +   + SA  LF+ M +KD++ W  +I+ Y+Q      A  ++  M+++ + P+EVTM 
Sbjct: 246 TRLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMS 305

Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
            + S C   GALE+GK +H Y+  QGL +DV + +ALVDMYAKCG ++ +  +F +   +
Sbjct: 306 TVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDK 365

Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
           ++  WNA++ G  +HG  E+AL  F  MER  + PNG+TFI +L+AC+HAGLV EG+S F
Sbjct: 366 NLYCWNAVIEGLAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRF 425

Query: 501 DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
             M     + P I HYGCMVD+L ++G L+EA E+IKSM   PN I+WGALL   KLH N
Sbjct: 426 LSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLNGCKLHGN 485

Query: 561 PSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRV-KKEPGFSSV 619
             + E A  Q++ +EP N G+  L+ ++YA    W +VA +R +MKE  V KK PG S +
Sbjct: 486 CEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEKDWMEVAHIRSMMKEKGVEKKYPGSSWI 545

Query: 620 EVNGLVHKF 628
           E+ G +H+F
Sbjct: 546 ELEGTIHQF 554



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 163/342 (47%), Gaps = 19/342 (5%)

Query: 10  LEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV 69
           +E  +  H HI K  F+       + L    +LV  Y K    S A  ++  M     E 
Sbjct: 154 VELGQMVHCHIWKKGFE-------SHLFVQTALVDFYSKLEILSEARKVFDEM----CER 202

Query: 70  DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF 129
           D F    +L A A+V      +++     +   + +    N +I  Y+  G++ SA  LF
Sbjct: 203 DAFAWTAMLSALARVGDMDSARKL----FEEMPERNTATWNTMIDGYTRLGNVESAELLF 258

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           ++MP +D++SW+TMI  Y +    ++AL +  EMR   I P EV M ++ S  A +  ++
Sbjct: 259 NQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALE 318

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
           LGK IH  V+   +   L V I +AL+DMY+KCG+L  +  +F +L   ++  W  +I G
Sbjct: 319 LGKEIHHYVMS--QGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEG 376

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFEF 308
                   + +R+FA M  E + P+ +T +S++  C   G +  G+     + R+     
Sbjct: 377 LAVHGYAEKALRMFAIMEREKIMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRP 436

Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMK-SKDVMIWNAVIS 349
            +     +VDM  K   +  A  L   M+   + +IW A+++
Sbjct: 437 DIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSIIWGALLN 478


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 216/623 (34%), Positives = 338/623 (54%), Gaps = 23/623 (3%)

Query: 28  SYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC----AQ 83
           S ++  +    +NSL+++     +   AL     M   G  + +FT+ ++L+A     A 
Sbjct: 119 SISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAA 178

Query: 84  VLMTHLGKEIHGFAIKNGL--DGDAYVSNALIQMYSECGSLVSARYLF-DEMPNR-DVVS 139
                LG+E H FA+KNGL      +  NAL+ MY+  G +  A+ LF    P R DVV+
Sbjct: 179 AAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVT 238

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           W+TM+    + G+ +EA++ + +M  + +RP  V   S +   + +  +D+G+ +HA V+
Sbjct: 239 WNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVI 298

Query: 200 RNCKDEKLGVA--IATALIDMYSKCGNLAYAKQLFNRLNQN--SVVSWTVMISGYIRCNE 255
              KD++L     +A+AL+DMY+    +  A+Q+F+ +  +   +  W  MI GY +   
Sbjct: 299 ---KDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGM 355

Query: 256 INEGVRLFAEMIEENVF-PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
             E +RLFA M  E  F P E T+ S++  C         + +H Y+++ G   +  + N
Sbjct: 356 DEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQN 415

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA-YAQAHCIDKAFELFIHMKV---S 370
           AL+DMY +  +   AR +F  +   DV+ WN +I+    Q H  D AF+L   M+     
Sbjct: 416 ALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVAD-AFQLAREMQQLEEG 474

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
            V PN +T++ LL  C    A   GK +H Y  +  L+ DV + +ALVDMYAKCG +  +
Sbjct: 475 GVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALS 534

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSH 489
             +F     R+   WN ++  YGMHG G EA + F  M  SG  +PN +TF+  L ACSH
Sbjct: 535 RAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSH 594

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI-VW 548
           +G+V  G  +F  M    G+ P  +   C+VD+LGRAG LDEA+ M+ SM      +  W
Sbjct: 595 SGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAW 654

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
             +L A +LH+N  +GEIA  ++LE+EP+   + VL+ NIY+ A +W   A VR  M+  
Sbjct: 655 STMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRR 714

Query: 609 RVKKEPGFSSVEVNGLVHKFIRG 631
            V KEPG S +EV+G +H+F+ G
Sbjct: 715 GVAKEPGCSWIEVDGAIHRFMAG 737



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 143/526 (27%), Positives = 245/526 (46%), Gaps = 43/526 (8%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL--DGDAYVSNALIQMYSEC 119
           M     ++D+  +P  +K+ A +      + IH  A++ GL       V+NAL+  Y+ C
Sbjct: 48  MASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARC 107

Query: 120 GSLVSARYLFDEMPN--RDVVSWSTMIRG---YHR-------------GGLPEEALEVMR 161
           G L +A  +F  + +   D VS++++I     + R             GG P  +  ++ 
Sbjct: 108 GRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVS 167

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
            +R +   P            A  A V LG+  HA  ++N            AL+ MY++
Sbjct: 168 VLRAVSHLP------------AAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYAR 215

Query: 222 CGNLAYAKQLFNRLN--QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            G +A A++LF      +  VV+W  M+S  ++    +E V+   +M+   V P  +T  
Sbjct: 216 LGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFA 275

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTLFDGM-- 336
           S +  C  +  L +G+ +HAY++++     +  +A+ALVDMY    ++  AR +FD +  
Sbjct: 276 SALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPD 335

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV-SKVRPNEVTMVGLLSLCTEAGALEMG 395
             K + +WNA+I  YAQA   ++A  LF  M+  +   P E TM  +L  C  + A    
Sbjct: 336 SGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGK 395

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H Y+ K+G+  +  ++ AL+DMYA+ G  + A R+F+     D+  WN ++ G  + 
Sbjct: 396 EAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQ 455

Query: 456 GCGEEALIFFVDM---ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
           G   +A     +M   E  GV PN IT + LL  C+       GK +    V    L   
Sbjct: 456 GHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRH-ALDTD 514

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +     +VD+  + G L  +  +   +P R N I W  L+ A  +H
Sbjct: 515 VAVGSALVDMYAKCGCLALSRAVFDRLPRR-NTITWNVLIMAYGMH 559


>gi|147797310|emb|CAN76007.1| hypothetical protein VITISV_013341 [Vitis vinifera]
          Length = 666

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 210/641 (32%), Positives = 341/641 (53%), Gaps = 52/641 (8%)

Query: 40  NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL-GKEIHGFAI 98
           N+L+  Y +  K       Y  +RK G E ++FT  ++LK  +      L  + +H  A 
Sbjct: 5   NALLILYSEQGKWRELTAFYHQIRKQGFEPNSFTFSSLLKCLSSSQSPLLHAQPLHADAA 64

Query: 99  KNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMP----------------------NR 135
           K G +  D +V+N L+ +YS CGS  SAR +FDE+P                       R
Sbjct: 65  KRGFVSSDPFVTNDLLTVYSRCGSPQSARKMFDEIPVPGPFCWNTMISCYFRESHCGAAR 124

Query: 136 DV------------VSWSTMIRGYHRGGLPEEALEVMREMRF------MDIRPSEVAMIS 177
           ++            V+WS +I GY +   P++AL V +EMR         + P    + S
Sbjct: 125 ELFDRMREAHLANDVTWSAVIAGYAQNSRPKDALFVFKEMRGECDEMGSPLSPMSHTITS 184

Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
           + S    + DV LG+ IH  V++     +    + + ++DMY KCG    A+ +F  +  
Sbjct: 185 VFSACGQLRDVILGEQIHGYVMKISSYVENDAFVGSVVVDMYGKCGFEELARFVFYSIVD 244

Query: 238 NSVVSWTVMISGYIRCNEIN-EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
             VV WT +I+ Y+ CNE     + +F EMI E + P+ +T+ SLI  C  +  L LGK 
Sbjct: 245 KCVVVWTALIASYV-CNECPCPAIEVFREMIYEGMEPNCVTLSSLISACSQIPDLMLGKE 303

Query: 297 LHAYILRN--GFEFSLAMANALVDMYGKCREIRSARTLFDGMKS----KDVMIWNAVISA 350
           +H +I R        + ++ +L+DMYGKC  +     +F+  K+        +WNA I+ 
Sbjct: 304 IHGFITRRRAATTPDVFISTSLIDMYGKCNYMVYGHRIFEKDKTYPRCNTTALWNATIAG 363

Query: 351 YAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
           Y + + +  A+++F  +   + + PN VTM  +L LC  +  L  GK +H Y  + GL+ 
Sbjct: 364 YMENNFVSDAWDVFRSITHGEGINPNTVTMSIVLPLCARSSQLLSGKEIHCYALRNGLDQ 423

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAI-YRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
           ++ +   L+DMY+KCG +  A   F+  +  ++   W +M+ G+G+HG GE A+  F  M
Sbjct: 424 EIFVSNGLIDMYSKCGKLKLAENQFNRMMNEKNRISWTSMIDGHGIHGDGEGAIRVFESM 483

Query: 469 ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGL 528
            R  VKP+ ITF+ L++ACSHAGL+ +G   F++M    G+VP  E+YG +VDLL RAG 
Sbjct: 484 VREEVKPDHITFVALISACSHAGLLEQGLRYFEEMSREYGIVPVEENYGTVVDLLARAGR 543

Query: 529 LDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNI 588
             EA ++I+ MP++P   VWGALL A ++H N    E+AA  + ++EP++ G+  L+++I
Sbjct: 544 FKEARDLIERMPIKPGANVWGALLGACRIHGNVKEAELAAHCLQKLEPKDSGFQKLLASI 603

Query: 589 YAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           Y  A R  +   +R  M+E+ ++K  GFS +E    +++ I
Sbjct: 604 YLEAGRRENAEDLRSQMREMGMEKRQGFSWLETKEEIYESI 644



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 238/468 (50%), Gaps = 24/468 (5%)

Query: 14  RQCHAHIIKTHF-KFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDN- 71
           R+ H    +  F +    ++ N +T +++++  Y +N++P  AL ++  MR    E+ + 
Sbjct: 116 RESHCGAARELFDRMREAHLANDVT-WSAVIAGYAQNSRPKDALFVFKEMRGECDEMGSP 174

Query: 72  -----FTIPTILKACAQVLMTHLGKEIHGFAIK--NGLDGDAYVSNALIQMYSECGSLVS 124
                 TI ++  AC Q+    LG++IHG+ +K  + ++ DA+V + ++ MY +CG    
Sbjct: 175 LSPMSHTITSVFSACGQLRDVILGEQIHGYVMKISSYVENDAFVGSVVVDMYGKCGFEEL 234

Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
           AR++F  + ++ VV W+ +I  Y     P  A+EV REM +  + P+ V + S++S  + 
Sbjct: 235 ARFVFYSIVDKCVVVWTALIASYVCNECPCPAIEVFREMIYEGMEPNCVTLSSLISACSQ 294

Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ----NSV 240
           + D+ LGK IH  + R        V I+T+LIDMY KC  + Y  ++F +       N+ 
Sbjct: 295 IPDLMLGKEIHGFITRRRAATTPDVFISTSLIDMYGKCNYMVYGHRIFEKDKTYPRCNTT 354

Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIE-ENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
             W   I+GY+  N +++   +F  +   E + P+ +T+  ++  C     L  GK +H 
Sbjct: 355 ALWNATIAGYMENNFVSDAWDVFRSITHGEGINPNTVTMSIVLPLCARSSQLLSGKEIHC 414

Query: 300 YILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG-MKSKDVMIWNAVISAYAQAHCID 358
           Y LRNG +  + ++N L+DMY KC +++ A   F+  M  K+ + W ++I  +      +
Sbjct: 415 YALRNGLDQEIFVSNGLIDMYSKCGKLKLAENQFNRMMNEKNRISWTSMIDGHGIHGDGE 474

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT--- 415
            A  +F  M   +V+P+ +T V L+S C+ AG LE G     Y E+   E  ++      
Sbjct: 475 GAIRVFESMVREEVKPDHITFVALISACSHAGLLEQGL---RYFEEMSREYGIVPVEENY 531

Query: 416 -ALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHGCGEEA 461
             +VD+ A+ G    A  L     I     +W A++    +HG  +EA
Sbjct: 532 GTVVDLLARAGRFKEARDLIERMPIKPGANVWGALLGACRIHGNVKEA 579


>gi|302782567|ref|XP_002973057.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
 gi|300159658|gb|EFJ26278.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
          Length = 531

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 181/537 (33%), Positives = 298/537 (55%), Gaps = 38/537 (7%)

Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
           MY +CGS+  AR +FD + NRD VSW++MI  Y   G  +EAL++ ++M    I+P  + 
Sbjct: 1   MYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSIT 60

Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
             S +     +AD   GKAIHA +V +  +      + +ALI+MY++CG+++ A+Q F +
Sbjct: 61  FTSALLACTKLAD---GKAIHARIVSSNMESDF---VGSALINMYARCGDVSSARQAFEK 114

Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
           +    VV WT +++ Y++     E + L+  M  E V    +T ++ +  C  +G L+ G
Sbjct: 115 IQNKHVVCWTSLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEG 174

Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS---------------- 338
           K +H  +   GF+ SL +  AL+ MY KC E+ +AR +F+ + S                
Sbjct: 175 KAIHLRVSECGFQ-SLVVHTALLTMYAKCGELDAARAVFNRLASNVAVQNALVTMYAKCG 233

Query: 339 --------------KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
                         KD++ WNA+I AYAQ     +A +L+  M    V P+EVT+   LS
Sbjct: 234 SLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLS 293

Query: 385 LCTEAGALEMGKWLHTYIEK-QGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
            C  +G+L++G+ +H+ + K Q  +  ++++TALV+MY +CG +  A  +F +   RD+ 
Sbjct: 294 ACAISGSLQLGREIHSRVLKNQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVL 353

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            W AM + Y   G  ++ L  +++M   G++PN ITF  +L  CSHAGL+  G   F +M
Sbjct: 354 SWTAMTSVYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEM 413

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
                +VP  EH+ CMVDLLGR+G L +A  +++SMP +P+ + W  +L + K H +   
Sbjct: 414 QSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADT 473

Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
            + AA ++ E++P+N     L+S+I+  A    +   V+  MKE+ +KK PG S +E
Sbjct: 474 AKRAARRVKELDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLIE 530



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 228/458 (49%), Gaps = 44/458 (9%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + S+++SY  N     AL++Y  M  +G + D+ T  + L AC ++     GK IH   +
Sbjct: 26  WTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTKLAD---GKAIHARIV 82

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            + ++ D +V +ALI MY+ CG + SAR  F+++ N+ VV W++++  Y + G   EAL+
Sbjct: 83  SSNMESD-FVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTGHYREALD 141

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           +   M    +    V  ++ +   A +  +  GKAIH   V  C  + L   + TAL+ M
Sbjct: 142 LYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIH-LRVSECGFQSL--VVHTALLTM 198

Query: 219 YSKCGNLAYAKQLFNRLNQN------------------------------SVVSWTVMIS 248
           Y+KCG L  A+ +FNRL  N                               +VSW  MI 
Sbjct: 199 YAKCGELDAARAVFNRLASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIG 258

Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRN-GFE 307
            Y +     E + L+  M  + V P E+TI S +  C   G LQLG+ +H+ +L+N  F+
Sbjct: 259 AYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFQ 318

Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM 367
            SL +  ALV+MYG+C  + +AR++F+ M  +DV+ W A+ S YAQ    D+  +L++ M
Sbjct: 319 SSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSVYAQQGHADQVLDLYLEM 378

Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT---ALVDMYAKC 424
            +  +RPNE+T   +L  C+ AG L  G  +  ++E Q     V ++     +VD+  + 
Sbjct: 379 VLHGIRPNEITFTSILVGCSHAGLLARG--VECFLEMQSEHEVVPIREHFLCMVDLLGRS 436

Query: 425 GDVNGAYRLFSEAIYR-DICMWNAMMAGYGMHGCGEEA 461
           G +  A  L     Y+ D   W  ++     H   + A
Sbjct: 437 GRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTA 474



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 194/419 (46%), Gaps = 68/419 (16%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH---- 94
           + SL+T+Y++      AL++Y  M   G   D  T  T L ACA +     GK IH    
Sbjct: 123 WTSLMTAYVQTGHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHLRVS 182

Query: 95  --GF-----------------------AIKNGLDGDAYVSNALIQMYSECGSLVSARYLF 129
             GF                       A+ N L  +  V NAL+ MY++CGSL  A+  F
Sbjct: 183 ECGFQSLVVHTALLTMYAKCGELDAARAVFNRLASNVAVQNALVTMYAKCGSLELAKSAF 242

Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD 189
           +    +D+VSW+ MI  Y + GL  EAL++ + M    + P EV + S +S  A    + 
Sbjct: 243 EASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQ 302

Query: 190 LGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISG 249
           LG+ IH+ V++N +  +  + + TAL++MY +CG L  A+ +F  + Q  V+SWT M S 
Sbjct: 303 LGREIHSRVLKN-QSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSV 361

Query: 250 YIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS 309
           Y +    ++ + L+ EM+   + P+EIT  S+++ C            HA +L  G E  
Sbjct: 362 YAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCS-----------HAGLLARGVECF 410

Query: 310 LAMAN------------ALVDMYGKCREIRSARTLFDGMKSK-DVMIWNAVISAYAQAHC 356
           L M +             +VD+ G+   +R A  L + M  + D + W  V+ +      
Sbjct: 411 LEMQSEHEVVPIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSD 470

Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLL-SLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
            D A       +V ++ P   ++  LL S+ T AG           + ++ LEV + +K
Sbjct: 471 ADTAKR--AARRVKELDPENTSLYSLLSSIFTAAG-----------LPQEALEVQLSMK 516



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 1/145 (0%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +N+++ +Y ++     AL++Y  M   G   D  TI + L ACA      LG+EIH 
Sbjct: 250 LVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHS 309

Query: 96  FAIKN-GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
             +KN        V  AL+ MY  CG L +AR +F++M  RDV+SW+ M   Y + G  +
Sbjct: 310 RVLKNQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSVYAQQGHAD 369

Query: 155 EALEVMREMRFMDIRPSEVAMISMV 179
           + L++  EM    IRP+E+   S++
Sbjct: 370 QVLDLYLEMVLHGIRPNEITFTSIL 394


>gi|297836444|ref|XP_002886104.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331944|gb|EFH62363.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 723

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 198/603 (32%), Positives = 337/603 (55%), Gaps = 15/603 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N +V   + +      L  ++ +R  G E +  T+  ++ AC  +     G++IHG+ I
Sbjct: 103 WNVIVFGLLDHGFEEEGLWWFSKLRVWGFEPNVSTLVLVIHACRSLWFD--GEKIHGYVI 160

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++G    + V N+++ +YSE  SL SAR LFDEM  RDV+SWS +IR Y +   P   LE
Sbjct: 161 RSGFWRISSVQNSILCLYSEFDSL-SARKLFDEMSERDVISWSVVIRSYVQSQEPVLGLE 219

Query: 159 VMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
           + +EM R     P  V + S++   A + D+D+G+++H   +R   D  + V +  +LID
Sbjct: 220 LFKEMVREAKTEPDCVTVTSVLKACAVLDDIDVGRSVHGFSIRRGFD-LVDVFVRNSLID 278

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           MYSK  +   A ++F+     ++VSW  +++G++     +E + +F  M +E +   E+T
Sbjct: 279 MYSKGYDADSAFRVFDETTCRNIVSWNSILAGFVYNQRYDEALEMFRLMKKEALEADEVT 338

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           ++SL+  C F       K +H  I+R G+E +    ++L+D Y  C  +  ART+FD M 
Sbjct: 339 LVSLLQVCKFFEHPLPCKSIHGVIIRRGYESNEVALSSLMDAYTSCSLVDDARTVFDSMS 398

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            KDV+  + +IS   +    D+A  +F  M+    +PN +T++ LLS C+ +  L   KW
Sbjct: 399 YKDVVSCSTMISGLGRCGRSDEAISIFCQMRD---KPNAITVISLLSACSVSAVLRTSKW 455

Query: 398 LHTYIEKQGLEV-DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
            H    ++GL + D+ + T++VD YAKCG ++ A R F +   + I  W  +++ Y ++G
Sbjct: 456 AHGIAIRRGLAINDISVDTSIVDAYAKCGAIDIARRTFDQITEKSIVSWTVIISAYAING 515

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
             ++AL  F +M+R    PN +T++  L+AC+H GLV +G  +F  MV      P ++HY
Sbjct: 516 LPDKALASFDEMKRDSYTPNAVTYLAALSACNHGGLVKKGLMIFRSMVEE-DQKPSLQHY 574

Query: 517 GCMVDLLGRAGLLDEAHEMIKSMP--LRPNMIVWGALLAA--SKLHKNPSMGEIAATQIL 572
            C+VD+L RAG +D A E+IK++P  ++     WGA+L+   ++L       E+ A ++L
Sbjct: 575 SCIVDMLSRAGEIDTAMELIKNLPEDVKAGASAWGAILSGCRNRLKSGIITSEVVA-EVL 633

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
           E+EP      +L S+++A    W DVA +RR++KE  V+   G+S V    +  KF+ G 
Sbjct: 634 ELEPLCSSGYLLASSVFAAEKSWVDVAMMRRLVKERNVRVVAGYSMVLEGSIARKFLAGD 693

Query: 633 MVN 635
            +N
Sbjct: 694 KLN 696



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 151/573 (26%), Positives = 282/573 (49%), Gaps = 56/573 (9%)

Query: 30  TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTH 88
           +++ + L   +S +     N K    ++ Y+ ++  G +  D F  P + KACA+     
Sbjct: 3   SHLYSKLQALSSKIKQASVNGKWREVVSGYSEIQSAGIQFNDPFVFPIVFKACAK----- 57

Query: 89  LGKEIHGFAIKNGLDGDAYVS--NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRG 146
           L   + GF        ++YVS  N++   Y +CG L S    FD M +RD VSW+ ++ G
Sbjct: 58  LSWLLQGF--------ESYVSVGNSIADFYMKCGDLCSGLRAFDCMNSRDSVSWNVIVFG 109

Query: 147 YHRGGLPEEALEVMREMRFMDIRPSEVAMISMV----SLFADVADVDLGKAIHACVVRNC 202
               G  EE L    ++R     P+   ++ ++    SL+ D      G+ IH  V+R+ 
Sbjct: 110 LLDHGFEEEGLWWFSKLRVWGFEPNVSTLVLVIHACRSLWFD------GEKIHGYVIRS- 162

Query: 203 KDEKLGV----AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE 258
                G     ++  +++ +YS+  +L+ A++LF+ +++  V+SW+V+I  Y++  E   
Sbjct: 163 -----GFWRISSVQNSILCLYSEFDSLS-ARKLFDEMSERDVISWSVVIRSYVQSQEPVL 216

Query: 259 GVRLFAEMIEE-NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF-SLAMANAL 316
           G+ LF EM+ E    P  +T+ S++  C  +  + +G+ +H + +R GF+   + + N+L
Sbjct: 217 GLELFKEMVREAKTEPDCVTVTSVLKACAVLDDIDVGRSVHGFSIRRGFDLVDVFVRNSL 276

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           +DMY K  +  SA  +FD    ++++ WN++++ +      D+A E+F  MK   +  +E
Sbjct: 277 IDMYSKGYDADSAFRVFDETTCRNIVSWNSILAGFVYNQRYDEALEMFRLMKKEALEADE 336

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           VT+V LL +C         K +H  I ++G E + +  ++L+D Y  C  V+ A  +F  
Sbjct: 337 VTLVSLLQVCKFFEHPLPCKSIHGVIIRRGYESNEVALSSLMDAYTSCSLVDDARTVFDS 396

Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
             Y+D+   + M++G G  G  +EA+  F  M     KPN IT I LL+ACS + ++   
Sbjct: 397 MSYKDVVSCSTMISGLGRCGRSDEAISIFCQMRD---KPNAITVISLLSACSVSAVLRTS 453

Query: 497 KSVFDKMVHGLGL-----VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
                K  HG+ +     +  I     +VD   + G +D A      +    +++ W  +
Sbjct: 454 -----KWAHGIAIRRGLAINDISVDTSIVDAYAKCGAIDIARRTFDQIT-EKSIVSWTVI 507

Query: 552 LAASKLHKNPSMGEIAATQILEIEPQNYGYNVL 584
           ++A  ++  P   + A     E++  +Y  N +
Sbjct: 508 ISAYAINGLP---DKALASFDEMKRDSYTPNAV 537


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 216/623 (34%), Positives = 338/623 (54%), Gaps = 23/623 (3%)

Query: 28  SYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC----AQ 83
           S ++  +    +NSL+++     +   AL     M   G  + +FT+ ++L+A     A 
Sbjct: 119 SISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAA 178

Query: 84  VLMTHLGKEIHGFAIKNGL--DGDAYVSNALIQMYSECGSLVSARYLF-DEMPNR-DVVS 139
                LG+E H FA+KNGL      +  NAL+ MY+  G +  A+ LF    P R DVV+
Sbjct: 179 AAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVT 238

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           W+TM+    + G+ +EA++ + +M  + +RP  V   S +   + +  +D+G+ +HA V+
Sbjct: 239 WNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVI 298

Query: 200 RNCKDEKLGVA--IATALIDMYSKCGNLAYAKQLFNRLNQN--SVVSWTVMISGYIRCNE 255
              KD++L     +A+AL+DMY+    +  A+Q+F+ +  +   +  W  MI GY +   
Sbjct: 299 ---KDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGM 355

Query: 256 INEGVRLFAEMIEENVF-PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
             E +RLFA M  E  F P E T+ S++  C         + +H Y+++ G   +  + N
Sbjct: 356 DEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQN 415

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA-YAQAHCIDKAFELFIHMKV---S 370
           AL+DMY +  +   AR +F  +   DV+ WN +I+    Q H  D AF+L   M+     
Sbjct: 416 ALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVAD-AFQLAREMQQLEEG 474

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
            V PN +T++ LL  C    A   GK +H Y  +  L+ DV + +ALVDMYAKCG +  +
Sbjct: 475 GVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALS 534

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSH 489
             +F     R+   WN ++  YGMHG G EA + F  M  SG  +PN +TF+  L ACSH
Sbjct: 535 RAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSH 594

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI-VW 548
           +G+V  G  +F  M    G+ P  +   C+VD+LGRAG LDEA+ M+ SM      +  W
Sbjct: 595 SGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAW 654

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
             +L A +LH+N  +GEIA  ++LE+EP+   + VL+ NIY+ A +W   A VR  M+  
Sbjct: 655 STMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRR 714

Query: 609 RVKKEPGFSSVEVNGLVHKFIRG 631
            V KEPG S +EV+G +H+F+ G
Sbjct: 715 GVAKEPGCSWIEVDGAIHRFMAG 737



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 143/526 (27%), Positives = 245/526 (46%), Gaps = 43/526 (8%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL--DGDAYVSNALIQMYSEC 119
           M     ++D+  +P  +K+ A +      + IH  A++ GL       V+NAL+  Y+ C
Sbjct: 48  MASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARC 107

Query: 120 GSLVSARYLFDEMPN--RDVVSWSTMIRG---YHR-------------GGLPEEALEVMR 161
           G L +A  +F  + +   D VS++++I     + R             GG P  +  ++ 
Sbjct: 108 GRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVS 167

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
            +R +   P            A  A V LG+  HA  ++N            AL+ MY++
Sbjct: 168 VLRAVSHLP------------AAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYAR 215

Query: 222 CGNLAYAKQLFNRLN--QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            G +A A++LF      +  VV+W  M+S  ++    +E V+   +M+   V P  +T  
Sbjct: 216 LGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFA 275

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTLFDGM-- 336
           S +  C  +  L +G+ +HAY++++     +  +A+ALVDMY    ++  AR +FD +  
Sbjct: 276 SALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPD 335

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV-SKVRPNEVTMVGLLSLCTEAGALEMG 395
             K + +WNA+I  YAQA   ++A  LF  M+  +   P E TM  +L  C  + A    
Sbjct: 336 SGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGK 395

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H Y+ K+G+  +  ++ AL+DMYA+ G  + A R+F+     D+  WN ++ G  + 
Sbjct: 396 EAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQ 455

Query: 456 GCGEEALIFFVDM---ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
           G   +A     +M   E  GV PN IT + LL  C+       GK +    V    L   
Sbjct: 456 GHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRH-ALDTD 514

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +     +VD+  + G L  +  +   +P R N I W  L+ A  +H
Sbjct: 515 VAVGSALVDMYAKCGCLALSRAVFDRLPRR-NTITWNVLIMAYGMH 559


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 195/592 (32%), Positives = 314/592 (53%), Gaps = 17/592 (2%)

Query: 46  YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGD 105
           Y  NN    A  ++  M ++ +  D  T  T+L  C   +  +   ++H FA+K G D +
Sbjct: 116 YAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTN 175

Query: 106 AY--VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
            +  V N L++ Y E   L  A  LF+E+ ++D V+++T+I GY + GL  EA+ +  +M
Sbjct: 176 LFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKM 235

Query: 164 RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALIDMYSK 221
           R    +PS+     ++     + D  LG+ +H   V     +D  +G  I    +  YSK
Sbjct: 236 RQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQI----LHFYSK 291

Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM----IEENVFPSEIT 277
              +   + LFN + +   VS+ V+IS Y +  +  E + LF EM     +   FP   T
Sbjct: 292 HDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFA-T 350

Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
           +LS+      +  LQ+G+ +H   +    +  L + N+LVDMY KC     A  +F  + 
Sbjct: 351 MLSIAAN---LSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLS 407

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +  + W A+IS Y Q        +LF  M+ + +R ++ T   +L       +L +GK 
Sbjct: 408 QRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQ 467

Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
           LH +I + G   +V   + LVDMYAKCG +  A ++F E   R+   WNA+++ Y  +G 
Sbjct: 468 LHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGD 527

Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
           GE A+  F  M +SG++P+ ++ +G+L ACSH G V +G   F  M    G+ PK +HY 
Sbjct: 528 GEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYA 587

Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP- 576
           CM+DLLGR G   EA +++  MP  P+ I+W ++L A +++KN S+ E AA Q+  +E  
Sbjct: 588 CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKL 647

Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
           ++    V MSNIYA A +W +V  V++ M+E  +KK P +S VEVN  +H F
Sbjct: 648 RDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVF 699



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 133/525 (25%), Positives = 233/525 (44%), Gaps = 22/525 (4%)

Query: 38  RYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVD----NFTIPTILKACAQVLMTHLGKEI 93
           R  +L T       P +   + A + K G   D    NFT+  +L+          G+  
Sbjct: 11  RSRTLATLRQLRQPPPATRRVDARIIKTGFNTDTCRSNFTVEDLLRR---------GQVS 61

Query: 94  HGFAIKNGLDGDAYVS-NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
               + + +     VS N +I  Y + G L SAR+LFD MP+R VV+W+ ++  Y     
Sbjct: 62  AALKVYDEMPHKNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNH 121

Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
            +EA ++ R+M      P  V   +++    D    +    +HA  V+   D  L + + 
Sbjct: 122 FDEAFKLFRQMCRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVC 181

Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
             L+  Y +   L  A  LF  +     V++  +I+GY +     E + LF +M +    
Sbjct: 182 NVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHK 241

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           PS+ T   ++     +    LG+ LH   +  GF    ++ N ++  Y K   +   R L
Sbjct: 242 PSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNL 301

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F+ M   D + +N VIS+Y+QA   +++  LF  M+             +LS+     +L
Sbjct: 302 FNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSL 361

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
           ++G+ +H        +  + +  +LVDMYAKC   + A  +F     R    W A+++GY
Sbjct: 362 QVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGY 421

Query: 453 ---GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
              G+HG G   L  F  M  + ++ +  TF  +L A +    +  GK +   ++    L
Sbjct: 422 VQKGLHGAG---LKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNL 478

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
                  G +VD+  + G + +A ++ + MP R N + W AL++A
Sbjct: 479 ENVFSGSG-LVDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISA 521



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 78/141 (55%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +L++ Y++     + L ++  MR      D  T  T+LKA A      LGK++H F I
Sbjct: 414 WTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFII 473

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           ++G   + +  + L+ MY++CGS+  A  +F+EMP+R+ VSW+ +I  Y   G  E A+ 
Sbjct: 474 RSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIG 533

Query: 159 VMREMRFMDIRPSEVAMISMV 179
              +M    ++P  V+++ ++
Sbjct: 534 AFTKMIQSGLQPDSVSILGVL 554



 Score = 45.8 bits (107), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 87/212 (41%), Gaps = 32/212 (15%)

Query: 1   MKIKNGFLNLEQTRQCHAHIIKT---HFKFSYTNIINPLTR------------------- 38
           +K   GF +L   +Q HA II++      FS + +++   +                   
Sbjct: 453 LKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNA 512

Query: 39  --YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE-IHG 95
             +N+L+++Y  N    +A+  +  M ++G + D+ +I  +L AC+       G E    
Sbjct: 513 VSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQA 572

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP-NRDVVSWSTMI---RGYHRGG 151
            +   G+         ++ +    G    A  L DEMP   D + WS+++   R Y    
Sbjct: 573 MSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQS 632

Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFA 183
           L E A E +  M  +       A +SM +++A
Sbjct: 633 LAERAAEQLFSMEKLR---DAAAYVSMSNIYA 661


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 189/603 (31%), Positives = 323/603 (53%), Gaps = 15/603 (2%)

Query: 37  TRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGF 96
           T +  ++ ++    + S AL+++  M   G   D  T+ T+L      +       +H F
Sbjct: 106 TTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCTV-----PSLHPF 160

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
           AIK GLD   +V N L+  Y + G L +AR +F EM ++D V+++ M+ G  + GL  +A
Sbjct: 161 AIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQA 220

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
           L++   MR   I  +     S++++ A +A + LG  +HA V+R+     L V +  +L+
Sbjct: 221 LQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALVLRST--SVLNVFVNNSLL 278

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM----IEENVF 272
           D YSKC  L   ++LF+ + +   VS+ V+I+ Y         +RLF EM     +  V 
Sbjct: 279 DFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAYAWNQCAATVLRLFREMQKLGFDRQVL 338

Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
           P   T+LS+    G +  + +GK +HA ++  G      + NAL+DMY KC  + +A++ 
Sbjct: 339 PYA-TMLSV---AGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSN 394

Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
           F     K  + W A+I+ Y Q    ++A +LF  M+ + +RP+  T   ++   +    +
Sbjct: 395 FSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMI 454

Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
            +G+ LH+Y+ + G +  V   + LVDMYAKCG ++ A R F E   R+   WNA+++ Y
Sbjct: 455 GLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPERNSISWNAVISAY 514

Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
             +G  + A+  F  M   G  P+ +TF+ +L ACSH GL  E    F  M H   + P 
Sbjct: 515 AHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPW 574

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
            EHY C++D LGR G   +  +M+  MP + + I+W ++L + ++H N  +  +AA ++ 
Sbjct: 575 KEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLF 634

Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
            +EP +    V++SNIYA A +W D A V+++M++  V+KE G+S VE+   ++ F    
Sbjct: 635 GMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKESGYSWVEIKQKIYSFASND 694

Query: 633 MVN 635
           + +
Sbjct: 695 LTS 697



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 218/445 (48%), Gaps = 9/445 (2%)

Query: 110 NALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIR 169
           N ++  YS  G L +A++LF   P+R+  +W+ M+R +   G   +AL + R M    + 
Sbjct: 78  NLILSAYSSSGDLPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVI 137

Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
           P  V + ++++L           ++H   ++   D    V +   L+D Y K G LA A+
Sbjct: 138 PDRVTVTTVLNLPGCTV-----PSLHPFAIKFGLDTH--VFVCNTLLDAYCKHGLLAAAR 190

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
           ++F  ++    V++  M+ G  +     + ++LFA M    +  +  T  S++     + 
Sbjct: 191 RVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMA 250

Query: 290 GLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS 349
            L LG  +HA +LR+    ++ + N+L+D Y KC  +   R LFD M  +D + +N +I+
Sbjct: 251 HLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIA 310

Query: 350 AYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEV 409
           AYA   C      LF  M+        +    +LS+      + +GK +H  +   GL  
Sbjct: 311 AYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLAS 370

Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
           + +L  AL+DMY+KCG ++ A   FS    +    W A++ GY  +G  EEAL  F DM 
Sbjct: 371 EDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMR 430

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
           R+G++P+  TF  ++ A S   ++  G+ +   ++   G    +     +VD+  + G L
Sbjct: 431 RAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRS-GYKSSVFSGSVLVDMYAKCGCL 489

Query: 530 DEAHEMIKSMPLRPNMIVWGALLAA 554
           DEA      MP R N I W A+++A
Sbjct: 490 DEALRTFDEMPER-NSISWNAVISA 513



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 116/291 (39%), Gaps = 42/291 (14%)

Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA---- 352
           L A +++ GF+      N  +        +  AR +FD M  K++   N ++SAY+    
Sbjct: 30  LDARMVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGD 89

Query: 353 -----------------------QAHC----IDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
                                  +AH        A  LF  M    V P+ VT+  +L+L
Sbjct: 90  LPAAQHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNL 149

Query: 386 --CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
             CT          LH +  K GL+  V +   L+D Y K G +  A R+F E   +D  
Sbjct: 150 PGCTVPS-------LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVFLEMHDKDAV 202

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            +NAMM G    G   +AL  F  M R+G+     TF  +L   +    +  G  V   +
Sbjct: 203 TYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHALV 262

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
           +    ++  +     ++D   +   LD+   +   MP R N + +  ++AA
Sbjct: 263 LRSTSVL-NVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDN-VSYNVIIAA 311


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 216/623 (34%), Positives = 338/623 (54%), Gaps = 23/623 (3%)

Query: 28  SYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC----AQ 83
           S ++  +    +NSL+++     +   AL     M   G  + +FT+ ++L+A     A 
Sbjct: 121 SISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVSVLRAVSHLPAA 180

Query: 84  VLMTHLGKEIHGFAIKNGL--DGDAYVSNALIQMYSECGSLVSARYLF-DEMPNR-DVVS 139
                LG+E H FA+KNGL      +  NAL+ MY+  G +  A+ LF    P R DVV+
Sbjct: 181 AAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYARLGLVADAQRLFAGATPGRGDVVT 240

Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
           W+TM+    + G+ +EA++ + +M  + +RP  V   S +   + +  +D+G+ +HA V+
Sbjct: 241 WNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVI 300

Query: 200 RNCKDEKLGVA--IATALIDMYSKCGNLAYAKQLFNRLNQN--SVVSWTVMISGYIRCNE 255
              KD++L     +A+AL+DMY+    +  A+Q+F+ +  +   +  W  MI GY +   
Sbjct: 301 ---KDDELAANSFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGM 357

Query: 256 INEGVRLFAEMIEENVF-PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
             E +RLFA M  E  F P E T+ S++  C         + +H Y+++ G   +  + N
Sbjct: 358 DEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRGMAGNRFVQN 417

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA-YAQAHCIDKAFELFIHMKV---S 370
           AL+DMY +  +   AR +F  +   DV+ WN +I+    Q H  D AF+L   M+     
Sbjct: 418 ALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQGHVAD-AFQLAREMQQLEEG 476

Query: 371 KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGA 430
            V PN +T++ LL  C    A   GK +H Y  +  L+ DV + +ALVDMYAKCG +  +
Sbjct: 477 GVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKCGCLALS 536

Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSH 489
             +F     R+   WN ++  YGMHG G EA + F  M  SG  +PN +TF+  L ACSH
Sbjct: 537 RAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVLFDRMTASGEARPNEVTFMAALAACSH 596

Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI-VW 548
           +G+V  G  +F  M    G+ P  +   C+VD+LGRAG LDEA+ M+ SM      +  W
Sbjct: 597 SGMVDRGLQLFHAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMETGEQQVSAW 656

Query: 549 GALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEI 608
             +L A +LH+N  +GEIA  ++LE+EP+   + VL+ NIY+ A +W   A VR  M+  
Sbjct: 657 STMLGACRLHRNVHLGEIAGERLLELEPEEASHYVLLCNIYSAAGQWTRAAEVRSRMRRR 716

Query: 609 RVKKEPGFSSVEVNGLVHKFIRG 631
            V KEPG S +EV+G +H+F+ G
Sbjct: 717 GVAKEPGCSWIEVDGAIHRFMAG 739



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 143/526 (27%), Positives = 245/526 (46%), Gaps = 43/526 (8%)

Query: 62  MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL--DGDAYVSNALIQMYSEC 119
           M     ++D+  +P  +K+ A +      + IH  A++ GL       V+NAL+  Y+ C
Sbjct: 50  MASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPSPAVANALLTAYARC 109

Query: 120 GSLVSARYLFDEMPN--RDVVSWSTMIRG---YHR-------------GGLPEEALEVMR 161
           G L +A  +F  + +   D VS++++I     + R             GG P  +  ++ 
Sbjct: 110 GRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAMLAGGHPLTSFTLVS 169

Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
            +R +   P            A  A V LG+  HA  ++N            AL+ MY++
Sbjct: 170 VLRAVSHLP------------AAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMYAR 217

Query: 222 CGNLAYAKQLFNRLN--QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
            G +A A++LF      +  VV+W  M+S  ++    +E V+   +M+   V P  +T  
Sbjct: 218 LGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGVTFA 277

Query: 280 SLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTLFDGM-- 336
           S +  C  +  L +G+ +HAY++++     +  +A+ALVDMY    ++  AR +FD +  
Sbjct: 278 SALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHEQVGKARQVFDMVPD 337

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKV-SKVRPNEVTMVGLLSLCTEAGALEMG 395
             K + +WNA+I  YAQA   ++A  LF  M+  +   P E TM  +L  C  + A    
Sbjct: 338 SGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEAFAGK 397

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           + +H Y+ K+G+  +  ++ AL+DMYA+ G  + A R+F+     D+  WN ++ G  + 
Sbjct: 398 EAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTLITGCVVQ 457

Query: 456 GCGEEALIFFVDM---ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
           G   +A     +M   E  GV PN IT + LL  C+       GK +    V    L   
Sbjct: 458 GHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVRH-ALDTD 516

Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +     +VD+  + G L  +  +   +P R N I W  L+ A  +H
Sbjct: 517 VAVGSALVDMYAKCGCLALSRAVFDRLPRR-NTITWNVLIMAYGMH 561


>gi|326522859|dbj|BAJ88475.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 691

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 199/595 (33%), Positives = 320/595 (53%), Gaps = 11/595 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT--HLGKEIHGF 96
           + S V+   +N +P +A  ++A M ++G  +++F     L ACA         G+++H  
Sbjct: 63  WTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACNAALAACAAAGPGALRTGEQVHSL 122

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
           A++ G  GDA+V + L+++Y+ CGS  +A  +   M + DVV++++++    R G    A
Sbjct: 123 AVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSALCRSGEFGMA 182

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
            E + +M    + P+E    ++ S+ A    + LG  IH  +++     +  V  ++ L+
Sbjct: 183 AEALGQMMGHGVMPNE---HTVTSILAACCPLVLGVQIHGYMIKAMGFSQ-SVYTSSTLV 238

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF-PSE 275
           D YS+ G    AK +F+ L   +VV+W  M+  +IR     + ++LF EMI E V  P+E
Sbjct: 239 DFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMISEGVVSPNE 298

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
               +  I  G    + LG  LH+  +++G    L ++NAL+ MYG+   ++    +F G
Sbjct: 299 ---FAFSIALGACESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRG 355

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++  D++ W A ISAY Q    +KA  L   M    + PN+     +LS C +   L+ G
Sbjct: 356 IEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQG 415

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           +  H    K G +V      AL++MY+KCG +  A   F    +RD+  WN+++ G+  H
Sbjct: 416 RQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHAQH 475

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL-GLVPKIE 514
           G  +  L  F +M  +G +PN  T +G+L AC+HAGLV EG + F   + GL G      
Sbjct: 476 GEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFLTPP 535

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HY CMVD+LGR+G  D+A  +I+ MP  P ++VW  LLA+ +LH N   G +AA +++E+
Sbjct: 536 HYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHGNLETGRLAAEKLVEL 595

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
             Q+    VLMS I+A+   W D   VRR M E  V+KE G S VEV   VH F+
Sbjct: 596 SDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGVRKEAGRSWVEVRNEVHTFV 650



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 211/456 (46%), Gaps = 26/456 (5%)

Query: 118 ECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAM-- 175
           + G +  A  LFD MP ++VV+W++ + G  R G PE A E+     F D+  S VA+  
Sbjct: 41  KAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEM-----FADMVESGVALND 95

Query: 176 -----ISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA-IATALIDMYSKCGNLAYAK 229
                       A    +  G+ +H+  VR      +G A + + L+++Y++CG+   A+
Sbjct: 96  FACNAALAACAAAGPGALRTGEQVHSLAVRA---GFVGDAWVGSCLVELYARCGSTRAAE 152

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
            +  R+    VV++T ++S   R  E         +M+   V P+E T+ S++  C    
Sbjct: 153 AVLARMESPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAAC---C 209

Query: 290 GLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
            L LG  +H Y+++  GF  S+  ++ LVD Y +  E   A+T+FD ++ K+V+ W  ++
Sbjct: 210 PLVLGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMM 269

Query: 349 SAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
             + +    + A +LF  M     V PNE      L  C    ++ +G  LH+   K GL
Sbjct: 270 QLHIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGACE---SIALGSQLHSLAIKHGL 326

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
              + +  AL+ MY + G V     +F      DI  W A ++ Y  +G GE+A+     
Sbjct: 327 ASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSR 386

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           M   G+ PN   F  +L++C+   L+ +G+  F  +   LG   K      ++++  + G
Sbjct: 387 MHSQGLTPNDYAFSSVLSSCADLALLDQGRQ-FHCLALKLGCDVKTCTGNALINMYSKCG 445

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
            +  A      M  R ++  W +L+     H    M
Sbjct: 446 QIVPARLAFDIMDHR-DVTSWNSLIHGHAQHGEVDM 480



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 187/401 (46%), Gaps = 25/401 (6%)

Query: 198 VVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN 257
           VVR+CK            +D   K G +A A  LF+R+ + +VV+WT  +SG  R     
Sbjct: 29  VVRDCKR-----------LDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPE 77

Query: 258 EGVRLFAEMIEENVFPSEI--TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
               +FA+M+E  V  ++               G L+ G+ +H+  +R GF     + + 
Sbjct: 78  AAGEMFADMVESGVALNDFACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSC 137

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
           LV++Y +C   R+A  +   M+S DV+ + +++SA  ++     A E    M    V PN
Sbjct: 138 LVELYARCGSTRAAEAVLARMESPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPN 197

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTY-IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           E T+  +L+ C     L +G  +H Y I+  G    V   + LVD Y++ G+ + A  +F
Sbjct: 198 EHTVTSILAACC---PLVLGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVF 254

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSHAGLV 493
                +++  W  MM  +   G  E+AL  F +M   G V PN   F   L AC    L 
Sbjct: 255 DNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGACESIALG 314

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           ++  S+  K  HGL    ++ +   ++ + GR GL+ +   M + +   P+++ W A ++
Sbjct: 315 SQLHSLAIK--HGLASHLRVSN--ALLSMYGRIGLVQQLEAMFRGIE-DPDIVSWTAAIS 369

Query: 554 A--SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVA 592
           A     H   ++  ++      + P +Y ++ ++S+   +A
Sbjct: 370 AYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLA 410



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 114/243 (46%), Gaps = 3/243 (1%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  I +P +  + + +++Y +N     A+ + + M   G   +++   ++L +CA + + 
Sbjct: 353 FRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALL 412

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
             G++ H  A+K G D      NALI MYS+CG +V AR  FD M +RDV SW+++I G+
Sbjct: 413 DQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGH 472

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
            + G  +  L+   EM      P+E  ++ +++       VD G A     +       L
Sbjct: 473 AQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFL 532

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
                  ++DM  + G    A  L   +  +  V+ W  +++   R +   E  RL AE 
Sbjct: 533 TPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLAS-CRLHGNLETGRLAAEK 591

Query: 267 IEE 269
           + E
Sbjct: 592 LVE 594


>gi|326504712|dbj|BAK06647.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 658

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 198/618 (32%), Positives = 319/618 (51%), Gaps = 100/618 (16%)

Query: 90  GKEIHGFAIKNGL-DGDAYVSNALIQMYSECGSLVS---ARYLFDE-------------- 131
           G+++H  A K+GL   + +V N+L+  Y+   S  +   AR+LFDE              
Sbjct: 25  GEQLHALAAKSGLLASNTFVRNSLLAFYARLPSPQAPALARHLFDEIPLALRDPAAHNTL 84

Query: 132 -------------------MPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSE 172
                              MP RD VS++T++    R G  E+A+ V R M   D+ P+E
Sbjct: 85  LASLARAGRLDLAQGMLAEMPQRDTVSYTTVLTALARAGHAEDAVAVFRGMLAQDVPPNE 144

Query: 173 VAMISMVSLFA-DVADVDLGKA-------------------IHA-------CVVRNCKDE 205
           V +  +++  A +   V +G A                   +HA       C  R   ++
Sbjct: 145 VTLAGVLTALALERPPVPVGVAHGVTVRRGLNGFLIVATNLVHAYAAASQVCFAREIFEQ 204

Query: 206 KLGVAIAT--ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
                  T  A+++ Y K G L  A ++F R+ +   VSW  +I GYIR +  +E +R +
Sbjct: 205 MPDKNTVTWNAMLNGYLKAGMLPMAAEVFGRIPERDAVSWLTIIDGYIRADCTSEALRAY 264

Query: 264 AEMIEE-NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
             M+ E +   +   ++ LI  C     +  G+ LH  IL++GF+    +   L+  YG 
Sbjct: 265 VAMMAEVDTRGNAALLVDLIKVCARHAAVLEGQQLHTVILKDGFDAHPFVQATLIHFYGS 324

Query: 323 CREI-------------------------------RSARTLFDGMKSKDVMIWNAVISAY 351
           C  +                                 AR LFD M  +D + W+ ++S Y
Sbjct: 325 CDLLDIARMQFKLSDKSHIASWNALMSGLLHRNLMHEARQLFDDMPERDTISWSTLLSGY 384

Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
            Q+   +KA +LF  M  + V PN+VT+   LS   ++G LE G+++H YI    +++  
Sbjct: 385 VQSGHSNKALQLFYLMLGAGVEPNDVTLASTLSAVADSGMLEQGRFIHDYIISNSIQLTD 444

Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYR--DICMWNAMMAGYGMHGCGEEALIFFVDME 469
            L   L+DMYAKCG V  A +LFS   ++   +  WNA++    +HG    +L  F++++
Sbjct: 445 NLSAGLIDMYAKCGSVADAIQLFSHVKHKLSSVSPWNAIICSLAIHGHAHTSLELFLELQ 504

Query: 470 RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLL 529
           R+ +KPN +T+IG+LNAC HAGLVTEG+  F+ M    G+ P I+HYGCMVDLLGRAG L
Sbjct: 505 RTNIKPNSVTYIGVLNACCHAGLVTEGRHHFESMSREYGIQPTIKHYGCMVDLLGRAGHL 564

Query: 530 DEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIY 589
           +EA  +I+ MP+R ++++WG++LAA++ H N ++GE AA ++ +I+P +    V +SNI+
Sbjct: 565 EEAENLIQMMPMRSDVVIWGSILAAARTHGNVALGEKAAEELAKIDPNHGASKVALSNIF 624

Query: 590 AVANRWNDVAGVRRVMKE 607
           A A RWN+V+ VR+ +++
Sbjct: 625 AEAARWNNVSLVRKELQD 642



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/524 (23%), Positives = 231/524 (44%), Gaps = 78/524 (14%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           Y +++T+  +      A+ ++  M       +  T+  +L A A           HG  +
Sbjct: 112 YTTVLTALARAGHAEDAVAVFRGMLAQDVPPNEVTLAGVLTALALERPPVPVGVAHGVTV 171

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + GL+G   V+  L+  Y+    +  AR +F++MP+++ V+W+ M+ GY + G+   A E
Sbjct: 172 RRGLNGFLIVATNLVHAYAAASQVCFAREIFEQMPDKNTVTWNAMLNGYLKAGMLPMAAE 231

Query: 159 VMRE--------------------------------MRFMDIRPSEVAMISMVSLFADVA 186
           V                                   M  +D R +   ++ ++ + A  A
Sbjct: 232 VFGRIPERDAVSWLTIIDGYIRADCTSEALRAYVAMMAEVDTRGNAALLVDLIKVCARHA 291

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCG----------------------- 223
            V  G+ +H  ++++  D      +   LI  Y  C                        
Sbjct: 292 AVLEGQQLHTVILKDGFDAH--PFVQATLIHFYGSCDLLDIARMQFKLSDKSHIASWNAL 349

Query: 224 -------NLAY-AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
                  NL + A+QLF+ + +   +SW+ ++SGY++    N+ ++LF  M+   V P++
Sbjct: 350 MSGLLHRNLMHEARQLFDDMPERDTISWSTLLSGYVQSGHSNKALQLFYLMLGAGVEPND 409

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
           +T+ S +      G L+ G+++H YI+ N  + +  ++  L+DMY KC  +  A  LF  
Sbjct: 410 VTLASTLSAVADSGMLEQGRFIHDYIISNSIQLTDNLSAGLIDMYAKCGSVADAIQLFSH 469

Query: 336 MKSK--DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           +K K   V  WNA+I + A       + ELF+ ++ + ++PN VT +G+L+ C  AG + 
Sbjct: 470 VKHKLSSVSPWNAIICSLAIHGHAHTSLELFLELQRTNIKPNSVTYIGVLNACCHAGLVT 529

Query: 394 MGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAG 451
            G+     + ++ G++  +     +VD+  + G +  A  L      R D+ +W +++A 
Sbjct: 530 EGRHHFESMSREYGIQPTIKHYGCMVDLLGRAGHLEEAENLIQMMPMRSDVVIWGSILAA 589

Query: 452 YGMHG---CGEEALIFFVDMERSGVKPN-GITFIGLLNACSHAG 491
              HG    GE+A       E + + PN G + + L N  + A 
Sbjct: 590 ARTHGNVALGEKAA-----EELAKIDPNHGASKVALSNIFAEAA 628


>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 692

 Score =  338 bits (868), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 181/584 (30%), Positives = 312/584 (53%), Gaps = 7/584 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGK----EI 93
           +N+ +   + + + + AL  Y  M ++GS   D FT P ++KACA + +   G+     +
Sbjct: 109 WNAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRMVRENV 168

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
               ++  +    +V  AL+ M+++CG L  AR +F+ M  RD+ +W+ MI G    G  
Sbjct: 169 EADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDW 228

Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
            +A+ +   MR        V + +++       ++  G  +H C VR    +     ++ 
Sbjct: 229 LDAMSLFSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDD--TCVSN 286

Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
           AL+DMY KCG L  A ++F  +    VVSW+ +I+GY +  + +  V LF EM+   + P
Sbjct: 287 ALVDMYCKCGCLGMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKP 346

Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
           +  T+ S++     +   + GK +H + LRNGF+ S  + +A +D Y +   IR A  + 
Sbjct: 347 NSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVL 406

Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
           + M  +D++IWN++++ YA     D A   F  ++    RP+ VT+V +L +C     L 
Sbjct: 407 ELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLI 466

Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
            GK LH Y+ +  +     +  AL+DMY KC  +     +F     RD   +N +++ +G
Sbjct: 467 QGKELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFG 526

Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
            HG  +EA++ F  M+R G+ P+ +TF+ LL++CSHAGL+ +G   +D M+    + P  
Sbjct: 527 KHGHEDEAIMLFDLMKRDGIAPDKVTFVALLSSCSHAGLIEKGLHFYDIMLQDYNISPGK 586

Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE 573
           EHY C+VDL  R+G LD+A + + S+     + V G LL A ++H    + E+ A +I E
Sbjct: 587 EHYSCVVDLYSRSGKLDDAWKFVSSLQDEAEIDVLGCLLGACRVHNRMDIAELVAKRIFE 646

Query: 574 IEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
             P + GY++L+SNIYA A  W+ V  +R +++   +K + G S
Sbjct: 647 QNPSDPGYHILLSNIYANAGMWSHVTRIRTMIENRSLKNKTGNS 690



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 212/438 (48%), Gaps = 10/438 (2%)

Query: 106 AYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-R 164
           A ++  L+  Y+  G    A  + D MP R+  +W+  I+G    G   EALE    M R
Sbjct: 75  AVLAAQLVHAYARLGEAGRALSVLDGMPMRNSFAWNAAIKGLVDSGQFAEALETYWAMVR 134

Query: 165 FMDIRPSEVAMISMVSLFADVADVDLGKAIH----ACVVRNCKDEKLGVAIATALIDMYS 220
              +         ++   A +  V+ G+ +     A VVR        V +  AL+DM++
Sbjct: 135 DGSVAADGFTYPPVIKACAALGVVEQGRMVRENVEADVVRGVVAPS--VFVQCALVDMFA 192

Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
           KCG L  A+ +F  + +  + +WT MI G +   +  + + LF+ M  E      + I +
Sbjct: 193 KCGCLGEARSVFESMLERDLAAWTAMIGGAVHAGDWLDAMSLFSRMRSEGFLADSVIIAT 252

Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
           +I  CG    L+ G  LH   +R G      ++NALVDMY KC  +  A  +F  +  KD
Sbjct: 253 VIPACGRAKELRTGMVLHGCAVRCGVGDDTCVSNALVDMYCKCGCLGMADRVFWSIGFKD 312

Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
           V+ W+ +I+ Y+Q      +  LF  M  + ++PN  TM  +L   +E      GK +H 
Sbjct: 313 VVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLKPNSNTMASILPSLSEMKLFRHGKEIHG 372

Query: 401 YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEE 460
           +  + G +    L +A +D Y++ G +  A  +      RD+ +WN+M+AGY ++G  + 
Sbjct: 373 FSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIVLELMPKRDLVIWNSMVAGYAVNGNTDS 432

Query: 461 ALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVPKIEHYGCM 519
           AL  F  +++ G +P+ +T + +L  C+H   + +GK +   +V H +  V  + +   +
Sbjct: 433 ALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSN--AL 490

Query: 520 VDLLGRAGLLDEAHEMIK 537
           +D+  +   L++  E+ +
Sbjct: 491 IDMYCKCCCLEKGKEIFQ 508



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 119/241 (49%), Gaps = 4/241 (1%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
           L  +NS+V  Y  N    SAL  +  ++K G   D+ T+ ++L  C        GKE+H 
Sbjct: 414 LVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRLIQGKELHA 473

Query: 96  FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
           + +++ +     VSNALI MY +C  L   + +F  + +RD  +++T+I  + + G  +E
Sbjct: 474 YVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSFGKHGHEDE 533

Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
           A+ +   M+   I P +V  ++++S  +    ++ G   +  ++++  +   G    + +
Sbjct: 534 AIMLFDLMKRDGIAPDKVTFVALLSSCSHAGLIEKGLHFYDIMLQD-YNISPGKEHYSCV 592

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI-EENVFPS 274
           +D+YS+ G L  A +  + L   + +     + G  R +   +   L A+ I E+N  PS
Sbjct: 593 VDLYSRSGKLDDAWKFVSSLQDEAEIDVLGCLLGACRVHNRMDIAELVAKRIFEQN--PS 650

Query: 275 E 275
           +
Sbjct: 651 D 651


>gi|357516905|ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522763|gb|AET03217.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 189/555 (34%), Positives = 306/555 (55%), Gaps = 16/555 (2%)

Query: 76  TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
           T+L++C      H   +I    + +GL+ + +V+   I   S    +  AR LFD++P  
Sbjct: 17  TLLRSCKNYERLH---QIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARKLFDKIPQP 73

Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
           +  +W+ M RGY + G   + + +  E+  +   P+      ++     +  V  G+ +H
Sbjct: 74  NTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCGKLEGVREGEEVH 133

Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
            C  ++    K    +AT+LIDMYSK G +  A ++F  +++ +VV WT +I+GYI C +
Sbjct: 134 CCATKH--GFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTAIINGYILCGD 191

Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMA-N 314
           +  G RLF      ++ P    ++  ++  G++    +     A  L +       M+ N
Sbjct: 192 VVSGRRLF------DLAPERDVVMWSVLISGYIESKNMAA---ARELFDKMPNRDTMSWN 242

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVS-KVR 373
           A+++ Y    E+     +FD M  ++V  WN +I  Y +     +  E F  M V   V 
Sbjct: 243 AMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVI 302

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
           PN+ T+V +LS C+  GAL+MGKW+H Y E  G + ++ +   L+DMYAKCG +  A  +
Sbjct: 303 PNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVV 362

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F+    +DI  WN ++ G  +HG   +AL  F  M+  G +P+G+TF+G+L+AC+H GLV
Sbjct: 363 FNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLV 422

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            +G   F  MV    +VP+IEHYGCMVDLLGRAGLLD+A   I+ MP+ P+ ++W ALL 
Sbjct: 423 KDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLG 482

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           A +L+KN  + E+A  +++E+EP N    V++SNIY    R  DVA ++  M++   +K 
Sbjct: 483 ACRLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKL 542

Query: 614 PGFSSVEVNGLVHKF 628
           PG S +E N  V +F
Sbjct: 543 PGCSVIECNDSVVEF 557



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 220/435 (50%), Gaps = 20/435 (4%)

Query: 24  HFKFSYTNIINPLT-RYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACA 82
           H +  +  I  P T  +N++   Y++N      + ++  + +     + FT P I+K+C 
Sbjct: 62  HARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKSCG 121

Query: 83  QVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
           ++     G+E+H  A K+G   +++V+ +LI MYS+ G +  A  +F EM  R+VV W+ 
Sbjct: 122 KLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWTA 181

Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPS-EVAMIS-MVSLFADVADVDLGKAIHACVVR 200
           +I GY   G      +V+   R  D+ P  +V M S ++S + +  ++   + +      
Sbjct: 182 IINGYILCG------DVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFD---- 231

Query: 201 NCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
             K          A+++ Y+  G +   +++F+ + + +V SW  +I GY++    +E +
Sbjct: 232 --KMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETL 289

Query: 261 RLFAEM-IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
             F  M +E +V P++ T+++++  C  +G L +GKW+H Y    G++ +L + N L+DM
Sbjct: 290 ESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDM 349

Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYA-QAHCIDKAFELFIHMKVSKVRPNEVT 378
           Y KC  I +A  +F+ +  KD++ WN +I+  A   H  D A  +F  MK     P+ VT
Sbjct: 350 YAKCGVIENAVVVFNCLDRKDIISWNTIINGLAIHGHAPD-ALGMFDRMKSEGEEPDGVT 408

Query: 379 MVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE- 436
            VG+LS CT  G ++ G  +  + ++   +   +     +VD+  + G ++ A     + 
Sbjct: 409 FVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKM 468

Query: 437 AIYRDICMWNAMMAG 451
            I  D  +W A++  
Sbjct: 469 PIEPDAVIWAALLGA 483


>gi|326487167|dbj|BAJ89568.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 691

 Score =  338 bits (868), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 199/595 (33%), Positives = 320/595 (53%), Gaps = 11/595 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT--HLGKEIHGF 96
           + S V+   +N +P +A  ++A M ++G  +++F     L ACA         G+++H  
Sbjct: 63  WTSAVSGLTRNGRPEAAGEMFADMVESGVALNDFACNAALAACAAAGPGALRTGEQVHSL 122

Query: 97  AIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
           A++ G  GDA+V + L+++Y+ CGS  +A  +   M + DVV++++++    R G    A
Sbjct: 123 AVRAGFVGDAWVGSCLVELYARCGSTRAAEAVLARMESPDVVAYTSLVSALCRSGEFGMA 182

Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
            E + +M    + P+E    ++ S+ A    + LG  IH  +++     +  V  ++ L+
Sbjct: 183 AEALGQMMGHGVMPNE---HTVTSILAACCPLVLGVQIHGYMIKAMGFSQ-SVYTSSTLV 238

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF-PSE 275
           D YS+ G    AK +F+ L   +VV+W  M+  +IR     + ++LF EMI E V  P+E
Sbjct: 239 DFYSRNGEFDMAKTVFDNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMISEGVVSPNE 298

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
               +  I  G    + LG  LH+  +++G    L ++NAL+ MYG+   ++    +F G
Sbjct: 299 ---FAFSIALGACESIALGSQLHSLAIKHGLASHLRVSNALLSMYGRIGLVQQLEAMFRG 355

Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
           ++  D++ W A ISAY Q    +KA  L   M    + PN+     +LS C +   L+ G
Sbjct: 356 IEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALLDQG 415

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
           +  H    K G +V      AL++MY+KCG +  A   F    +RD+  WN+++ G+  H
Sbjct: 416 RQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGHAQH 475

Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL-GLVPKIE 514
           G  +  L  F +M  +G +PN  T +G+L AC+HAGLV EG + F   + GL G      
Sbjct: 476 GEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFLTPP 535

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           HY CMVD+LGR+G  D+A  +I+ MP  P ++VW  LLA+ +LH N   G +AA +++E+
Sbjct: 536 HYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLASCRLHGNLETGRLAAEKLVEL 595

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
             Q+    VLMS I+A+   W D   VRR M E  V+KE G S VEV   VH F+
Sbjct: 596 SDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGVRKEAGRSWVEVRNEVHTFV 650



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 121/456 (26%), Positives = 211/456 (46%), Gaps = 26/456 (5%)

Query: 118 ECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAM-- 175
           + G +  A  LFD MP ++VV+W++ + G  R G PE A E+     F D+  S VA+  
Sbjct: 41  KAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPEAAGEM-----FADMVESGVALND 95

Query: 176 -----ISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA-IATALIDMYSKCGNLAYAK 229
                       A    +  G+ +H+  VR      +G A + + L+++Y++CG+   A+
Sbjct: 96  FACNAALAACAAAGPGALRTGEQVHSLAVRA---GFVGDAWVGSCLVELYARCGSTRAAE 152

Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVG 289
            +  R+    VV++T ++S   R  E         +M+   V P+E T+ S++  C    
Sbjct: 153 AVLARMESPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPNEHTVTSILAAC---C 209

Query: 290 GLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
            L LG  +H Y+++  GF  S+  ++ LVD Y +  E   A+T+FD ++ K+V+ W  ++
Sbjct: 210 PLVLGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVFDNLQCKNVVTWCTMM 269

Query: 349 SAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
             + +    + A +LF  M     V PNE      L  C    ++ +G  LH+   K GL
Sbjct: 270 QLHIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGACE---SIALGSQLHSLAIKHGL 326

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
              + +  AL+ MY + G V     +F      DI  W A ++ Y  +G GE+A+     
Sbjct: 327 ASHLRVSNALLSMYGRIGLVQQLEAMFRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSR 386

Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
           M   G+ PN   F  +L++C+   L+ +G+  F  +   LG   K      ++++  + G
Sbjct: 387 MHSQGLTPNDYAFSSVLSSCADLALLDQGRQ-FHCLALKLGCDVKTCTGNALINMYSKCG 445

Query: 528 LLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
            +  A      M  R ++  W +L+     H    M
Sbjct: 446 QIVPARLAFDIMDHR-DVTSWNSLIHGHAQHGEVDM 480



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 187/401 (46%), Gaps = 25/401 (6%)

Query: 198 VVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN 257
           VVR+CK            +D   K G +A A  LF+R+ + +VV+WT  +SG  R     
Sbjct: 29  VVRDCKR-----------LDGLMKAGRVADALDLFDRMPRKNVVAWTSAVSGLTRNGRPE 77

Query: 258 EGVRLFAEMIEENVFPSEI--TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
               +FA+M+E  V  ++               G L+ G+ +H+  +R GF     + + 
Sbjct: 78  AAGEMFADMVESGVALNDFACNAALAACAAAGPGALRTGEQVHSLAVRAGFVGDAWVGSC 137

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPN 375
           LV++Y +C   R+A  +   M+S DV+ + +++SA  ++     A E    M    V PN
Sbjct: 138 LVELYARCGSTRAAEAVLARMESPDVVAYTSLVSALCRSGEFGMAAEALGQMMGHGVMPN 197

Query: 376 EVTMVGLLSLCTEAGALEMGKWLHTY-IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
           E T+  +L+ C     L +G  +H Y I+  G    V   + LVD Y++ G+ + A  +F
Sbjct: 198 EHTVTSILAACC---PLVLGVQIHGYMIKAMGFSQSVYTSSTLVDFYSRNGEFDMAKTVF 254

Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSHAGLV 493
                +++  W  MM  +   G  E+AL  F +M   G V PN   F   L AC    L 
Sbjct: 255 DNLQCKNVVTWCTMMQLHIRDGRPEDALQLFDEMISEGVVSPNEFAFSIALGACESIALG 314

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
           ++  S+  K  HGL    ++ +   ++ + GR GL+ +   M + +   P+++ W A ++
Sbjct: 315 SQLHSLAIK--HGLASHLRVSN--ALLSMYGRIGLVQQLEAMFRGIE-DPDIVSWTAAIS 369

Query: 554 A--SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVA 592
           A     H   ++  ++      + P +Y ++ ++S+   +A
Sbjct: 370 AYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLA 410



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 114/243 (46%), Gaps = 3/243 (1%)

Query: 29  YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
           +  I +P +  + + +++Y +N     A+ + + M   G   +++   ++L +CA + + 
Sbjct: 353 FRGIEDPDIVSWTAAISAYFQNGHGEKAIALLSRMHSQGLTPNDYAFSSVLSSCADLALL 412

Query: 88  HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
             G++ H  A+K G D      NALI MYS+CG +V AR  FD M +RDV SW+++I G+
Sbjct: 413 DQGRQFHCLALKLGCDVKTCTGNALINMYSKCGQIVPARLAFDIMDHRDVTSWNSLIHGH 472

Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
            + G  +  L+   EM      P+E  ++ +++       VD G A     +       L
Sbjct: 473 AQHGEVDMVLKAFSEMCSNGGEPNESTLLGVLAACNHAGLVDEGVAFFRSAMAGLYGTFL 532

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
                  ++DM  + G    A  L   +  +  V+ W  +++   R +   E  RL AE 
Sbjct: 533 TPPHYACMVDMLGRSGRFDDALCLIEEMPFEPGVLVWKTLLAS-CRLHGNLETGRLAAEK 591

Query: 267 IEE 269
           + E
Sbjct: 592 LVE 594


>gi|116312013|emb|CAJ86370.1| OSIGBa0117N13.14 [Oryza sativa Indica Group]
 gi|116312056|emb|CAJ86420.1| H0303G06.9 [Oryza sativa Indica Group]
          Length = 559

 Score =  338 bits (867), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 185/546 (33%), Positives = 294/546 (53%), Gaps = 4/546 (0%)

Query: 76  TILKACAQVLMTHLGKEIHG-FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN 134
           ++L+ C        GK +HG  A  +    D ++S  LI  Y+  G + +AR +FD MP+
Sbjct: 16  SLLQCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLIIFYARFGDVAAARKMFDGMPH 75

Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           R VVSW+ M+ GY R G P EALE+   MR    RP++    S  S  A       G+ +
Sbjct: 76  RSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARSGEQV 135

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
           HAC  +      + V   +AL+DM+ +CG++  A+QLF  + +  VVSW  +I G++   
Sbjct: 136 HACAAKGRFAGDMFVQ--SALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIRGFVERG 193

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
              + + LF+ M++E + P   T+ S +  CG VG     + +H+ I++ G+     +  
Sbjct: 194 HDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWDEKVVIG 253

Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA-QAHCIDKAFELFIHMKVSKVR 373
           +L++ Y KCR + SAR ++D +   D++   A+IS Y    +  + A ELF  +    + 
Sbjct: 254 SLINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRKGLW 313

Query: 374 PNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
            + V +  +L LC    +   G  +H Y+ K+    D+ L  ALVDMYAK G+ + A R 
Sbjct: 314 IDGVLLSSVLCLCASVASARFGTQIHAYMCKKQSMGDIALDNALVDMYAKAGEFSDAKRA 373

Query: 434 FSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
           F E  YR++  W +++   G +G GE+A+  F  M   GV+PN +TF+ LL+AC H GL 
Sbjct: 374 FDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGLT 433

Query: 494 TEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
            +G   F  M+   G+ P+ EHY   +DLL R G L++A ++++   L+PN  + GA+L 
Sbjct: 434 NKGMEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAMLG 493

Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           A KLH N  +GE AA  +  I+P +     +++N+YA  + W D    R V+ E    KE
Sbjct: 494 ACKLHGNMLLGETAAKNLFSIDPGSSVNYAVLANMYAECSLWEDAQRTREVIDETTDGKE 553

Query: 614 PGFSSV 619
            GFS +
Sbjct: 554 VGFSVI 559



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 135/477 (28%), Positives = 240/477 (50%), Gaps = 15/477 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + ++V+ Y +N +P  AL ++A MR +G+  + FT  +   ACA       G+++H  A 
Sbjct: 81  WTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARSGEQVHACAA 140

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           K    GD +V +AL+ M+  CGS+  AR LF EM  +DVVSW+ +IRG+   G   +AL 
Sbjct: 141 KGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIRGFVERGHDGDALG 200

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALID 217
           +   M    + P    + S +     V      + IH+C+++    DEK+   +  +LI+
Sbjct: 201 LFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWDEKV---VIGSLIN 257

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGY-IRCNEINEGVRLFAEMIEENVFPSEI 276
            Y+KC +++ A+ +++ +++  +VS T +ISGY +  N   + + LF ++  + ++   +
Sbjct: 258 SYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRKGLWIDGV 317

Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
            + S++  C  V   + G  +HAY+ +      +A+ NALVDMY K  E   A+  FD M
Sbjct: 318 LLSSVLCLCASVASARFGTQIHAYMCKKQSMGDIALDNALVDMYAKAGEFSDAKRAFDEM 377

Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG- 395
             ++V+ W ++I+A  +    + A  LF  M    VRPN+VT + LLS C   G    G 
Sbjct: 378 PYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGLTNKGM 437

Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA-IYRDICMWNAMMAGYGM 454
           ++  + + + G++      ++ +D+ A+ G +  A++L  +  +  +  M  AM+    +
Sbjct: 438 EYFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAMLGACKL 497

Query: 455 HG---CGEEAL--IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
           HG    GE A   +F +D    G   N      +   CS        + V D+   G
Sbjct: 498 HGNMLLGETAAKNLFSID---PGSSVNYAVLANMYAECSLWEDAQRTREVIDETTDG 551


>gi|413938252|gb|AFW72803.1| hypothetical protein ZEAMMB73_565260 [Zea mays]
          Length = 709

 Score =  338 bits (867), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 195/600 (32%), Positives = 326/600 (54%), Gaps = 45/600 (7%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSE----VDN------FTIPTILKACAQVLMTH 88
           Y  L++++ +   P  AL  +  M   G      VD+      FT   +++AC       
Sbjct: 96  YAPLISAHCRLGAPLDALRAFLDMLAWGCSDEEGVDDVVRPNEFTAAAVVQACGLARDER 155

Query: 89  LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
           L + +HG+ +  G   D +V  +L+ MY++ G + SAR L   +P RDVVSW+ ++ G  
Sbjct: 156 LARMVHGYLVAGGFCDDPFVLGSLVNMYAKVGDVASARRLLLGLPCRDVVSWTAIVSGCV 215

Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
              + EEAL V   M    + P+ V M+S++   A +   +L   +HA VV    + +  
Sbjct: 216 LNAMLEEALGVFLMMLEDGVLPNNVTMLSVIQACALMGASELFGPVHALVV--LLELEHD 273

Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
            ++  +LI MY+K G +  A +LF                 Y++                
Sbjct: 274 ASVVNSLIMMYAKNGFVEEAIRLFKGF--------------YLKTG-------------- 305

Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
            +V  +E  + +++  C   G ++ G+ LHA+ ++ G   S+++ N+L+ MY +  +I +
Sbjct: 306 -SVCSNEDVLAAVLYGCTISGSVKNGEGLHAHTIKMGAFPSISVENSLMGMYARFEQIDA 364

Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK---VRPNEVTMVGLLSL 385
           A  +F+GM+ KD++ WN +IS  A+   +++A ++F  +  +    + P+ VT++ +L  
Sbjct: 365 ALLVFEGMEVKDIVSWNTIISCLAKTDRVNEAMDIFSVLHAAAGGGLAPDFVTVLSMLQA 424

Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
           C+ AG L  G+ LH Y+ K G   DV +  AL+ MYAK G ++ A  +F     +D+  W
Sbjct: 425 CSNAGLLHQGQMLHGYVMKSGFVYDVSICNALISMYAKLGRIDFAEMIFERMDIKDLVSW 484

Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVK-PNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
           N+M+  YGMHG G  AL  F  ++ +G   PN ITF+ +++ACSH+GLV+EG   F+ M 
Sbjct: 485 NSMINAYGMHGDGHSALRVFHQLKDAGTPAPNAITFVSVISACSHSGLVSEGHKCFESMG 544

Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
              G+ P ++HY C+VDLLGR+G   EA + I+ MP+RP+  +WG LLAA +LH N  + 
Sbjct: 545 RDHGIEPSMDHYACVVDLLGRSGRFAEAEQFIRDMPVRPDSTIWGPLLAACQLHGNVDLA 604

Query: 565 EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGL 624
           E AA ++  +EP++  + V +SN YA   RW D A +R  M+ + ++KE G+S V+V G+
Sbjct: 605 EKAAKELSALEPESDIWRVSLSNTYASVGRWRDAAKIRSEMRRVGLRKETGWSFVDVGGV 664


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  338 bits (867), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 189/602 (31%), Positives = 320/602 (53%), Gaps = 11/602 (1%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
           +N L+ +Y +  +   +L  +    +    + D FT    L AC++      GK +H  A
Sbjct: 81  FNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALA 140

Query: 98  IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           +  GL    +VSN+L+ MY+ CG +  AR +FD    RD VSW++++ GY R G  EE L
Sbjct: 141 VLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEML 200

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFA--DVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
            V   MR   +  +  A+ S++   +  D +   + +A+H CVV+   D  L   +A+A+
Sbjct: 201 RVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDL--FLASAM 258

Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE------INEGVRLFAEMIEE 269
           +DMY+K G L+ A  LF  +   +VV +  MI+G  R         + E + L++E+   
Sbjct: 259 VDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSR 318

Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
            + P+E T  S+I  C   G ++ GK +H  +L++ F+    + +AL+D+Y     +   
Sbjct: 319 GMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDG 378

Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
              F  +  +DV+ W A+IS   Q    ++A  LF  +    ++P+  T+  +++ C   
Sbjct: 379 FRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASL 438

Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
             +  G+ +  +  K G +    +  + + MYA+ G+V  A + F E    D+  W+A++
Sbjct: 439 AVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAII 498

Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
           + +  HGC  +AL FF +M  + V PN ITF+G+L ACSH GLV EG   ++ M    GL
Sbjct: 499 SSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGL 558

Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
            P ++H  C+VDLLGRAG L +A   I+        +VW +LL + ++H++   G++ A 
Sbjct: 559 CPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVAD 618

Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
           +I+E++P + G  V + N+Y  A   +  + +R +MKE  VKKEPG S +E+   +H F+
Sbjct: 619 RIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSFV 678

Query: 630 RG 631
            G
Sbjct: 679 AG 680



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/500 (25%), Positives = 241/500 (48%), Gaps = 34/500 (6%)

Query: 78  LKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS--LVSARYLFDEMPNR 135
           L++CA +        +HG   +       ++ N L+  Y   G+     AR L DEMP R
Sbjct: 20  LRSCASLPQ---AAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEMPRR 76

Query: 136 DVVSWSTMIRGYHRGGLPEEALEV-MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
           + VS++ +I  Y R G  EE+LE  +   R  +++       + ++  +    +  GK +
Sbjct: 77  NAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVV 136

Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
           HA  V     E  GV ++ +L+ MY++CG++  A+++F+   +   VSW  ++SGY+R  
Sbjct: 137 HALAVLEGLAE--GVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSGYLRVG 194

Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIEC-GFVGGLQ-LGKWLHAYILRNGFEFSLAM 312
              E +R+FA M    +  +   + S+I  C G  G ++ + + +H  +++ G +  L +
Sbjct: 195 AHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFL 254

Query: 313 ANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVIS------AYAQAHCIDKAFELFIH 366
           A+A+VDMY K   +  A  LF  +   +V+++NA+I+      A      + +A  L+  
Sbjct: 255 ASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSE 314

Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGD 426
           ++   + P E T   ++  C  AG +E GK +H  + K   + D  + +AL+D+Y     
Sbjct: 315 LQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSAC 374

Query: 427 VNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA 486
           +   +R F     +D+  W AM++G   +   E AL  F ++   G+KP+  T   ++NA
Sbjct: 375 MEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNA 434

Query: 487 CSHAGLVTEG--------KSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
           C+   +V  G        KS FD+    +G           + +  R+G ++ A +  + 
Sbjct: 435 CASLAVVRTGEQMQCFATKSGFDRFT-AMG--------NSCIHMYARSGNVEAAIQRFQE 485

Query: 539 MPLRPNMIVWGALLAASKLH 558
           M    +++ W A++++   H
Sbjct: 486 ME-SHDVVSWSAIISSHAQH 504


>gi|302795666|ref|XP_002979596.1| hypothetical protein SELMODRAFT_51482 [Selaginella moellendorffii]
 gi|300152844|gb|EFJ19485.1| hypothetical protein SELMODRAFT_51482 [Selaginella moellendorffii]
          Length = 571

 Score =  338 bits (867), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 191/579 (32%), Positives = 316/579 (54%), Gaps = 15/579 (2%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++T Y K+   S A+  +A M +N    D  T   +L A   +     G+ IH    
Sbjct: 4   WTAMITGYAKHGDFSRAIQFFAEMERNHVLPDKITYVAVLGAIQDL---EQGRRIHVRIQ 60

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
           + G D D  V+NAL++MY+ C SL  A  +F+ M +RDVVSW+++I    R G    A+ 
Sbjct: 61  ETGYDTDLVVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDFPAAMG 120

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
           + R M+    RP+    I+++ L A   D   G AIH     +    +  V +  A+++M
Sbjct: 121 LFRRMQLQGTRPNR---ITLLELLAWCDDPGEGAAIHERAFAS--GLRSDVPVCNAILNM 175

Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
           ++K G    A +LF R+   + VSWT M++  +R    ++ +RLF +M ++ V P  I  
Sbjct: 176 HAKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDSIAF 235

Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA-RTLFDGMK 337
           +++I  C         +W+H  I+R G +   A++NA++  Y +C  ++ A RT  +  +
Sbjct: 236 ITVINACSSAA---TARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFVEIKE 292

Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
            +D + W  +ISA+A+   I +  +LF  M +  VR NEVT++ +++ C  A A++ G+W
Sbjct: 293 RRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGASAIKEGRW 352

Query: 398 LHTYIEKQGLE-VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
           +H  +    LE    ++ TAL+DMY KCG +  A R+F E    D+  W +++A    +G
Sbjct: 353 VHDCVIGYQLERSSSMVATALLDMYGKCGSLEVAARIFGELEQPDVVSWTSIIAATAQNG 412

Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV--HGLGLVPKIE 514
            G  A   F  M+  GV+P  +TF+ ++ ACSHAG+V  GK    ++   H  G+   +E
Sbjct: 413 DGSSAARLFCAMQLEGVRPVDVTFVSVVAACSHAGMVDLGKEFVTRLRKDHREGIELTLE 472

Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
           H GC+VDLL RAG L+EA  +I SMP +P   VW A LA  K +++ S G+ AA QIL +
Sbjct: 473 HCGCIVDLLARAGRLEEAECVIDSMPFKPTPAVWMAFLAGCKTYEDISRGQRAAAQILGL 532

Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
           + +     + +S+ YA ++R  D   +R +M +  +K+E
Sbjct: 533 DEKTTAAVIALSSTYAASDRRGDGEALRGLMADGCLKEE 571



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 222/453 (49%), Gaps = 25/453 (5%)

Query: 137 VVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHA 196
           VV W+ MI GY + G    A++   EM    + P +   I+ V++   + D++ G+ IH 
Sbjct: 1   VVIWTAMITGYAKHGDFSRAIQFFAEMERNHVLPDK---ITYVAVLGAIQDLEQGRRIHV 57

Query: 197 CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEI 256
            +     D  L   +A AL+ MY+ C +LA A ++F  ++   VVSWT +I+   R  + 
Sbjct: 58  RIQETGYDTDL--VVANALMKMYAACSSLADATRVFEAMDHRDVVSWTSIIAANARAGDF 115

Query: 257 NEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANAL 316
              + LF  M  +   P+ IT+L L+  C   G    G  +H     +G    + + NA+
Sbjct: 116 PAAMGLFRRMQLQGTRPNRITLLELLAWCDDPGE---GAAIHERAFASGLRSDVPVCNAI 172

Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
           ++M+ K     +A  LF+ M  ++ + W A+++A  +A   D A  LF  M+   V P+ 
Sbjct: 173 LNMHAKAGRFETASELFERMPVRNAVSWTAMMAAMVRAGRHDDALRLFRDMEDDGVEPDS 232

Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
           +  + +++ C+ A      +W+H  I + G + D  +  A++  YA+CG +  AYR F E
Sbjct: 233 IAFITVINACSSAAT---ARWIHGCIIRGGCDSDTAVSNAIIRAYARCGSLKEAYRTFVE 289

Query: 437 -AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTE 495
               RD   W  M++ +   G  +  +  F +M   GV+ N +T I ++NAC+ A  + E
Sbjct: 290 IKERRDHVSWTTMISAFAEFGRIKRCVQLFREMLLEGVRANEVTLITVVNACAGASAIKE 349

Query: 496 GKSVFDKMVHGLGLVPKIEHYGCMV-----DLLGRAGLLDEAHEMIKSMPLRPNMIVWGA 550
           G+ V D ++       ++E    MV     D+ G+ G L+ A  +   +  +P+++ W +
Sbjct: 350 GRWVHDCVIG-----YQLERSSSMVATALLDMYGKCGSLEVAARIFGELE-QPDVVSWTS 403

Query: 551 LLAASKLHKNPSMGE--IAATQILEIEPQNYGY 581
           ++AA+  + + S       A Q+  + P +  +
Sbjct: 404 IIAATAQNGDGSSAARLFCAMQLEGVRPVDVTF 436


>gi|326511827|dbj|BAJ92058.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 581

 Score =  338 bits (867), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 172/465 (36%), Positives = 275/465 (59%), Gaps = 13/465 (2%)

Query: 174 AMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT----ALIDMYSKCGNLAYAK 229
           ++ + +S  A +  V +G  +HA  V      KLG++  T     LI+MYS C   + A+
Sbjct: 95  SLSAALSTAARMPSVVVGAQLHALSV------KLGLSSDTFVLNTLINMYSSCSYPSTAR 148

Query: 230 QLFNRLNQNS--VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
            + +   + +   VSW  +I+GYI     N+ ++ F++M +  V   ++T+L+ ++ C  
Sbjct: 149 SVLDSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACAR 208

Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
              +++GK  HA ++ NGFE +  M ++L+ MY KC ++  AR +FDGM  ++ + W ++
Sbjct: 209 TCMMKVGKLCHALLVTNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSM 268

Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
           IS Y Q     +A +LF  M+++ V+ ++ T+  ++S C + GAL++G+++H Y +  GL
Sbjct: 269 ISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGL 328

Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
             D+ +K +L+DMY+KCGD+  AY +F   + RD   W  ++ G+  +G   EAL  F  
Sbjct: 329 GKDISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQ 388

Query: 468 MERS-GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRA 526
           ME   GV PN ITF+G+L +CSH GLV +G   F +M    G+ P+IEHYGCMVDLLGRA
Sbjct: 389 MEEEGGVMPNEITFLGVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRA 448

Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMS 586
            LL EA + IK MP+ P+ ++W +LL A +      + E  A +I  +EP   G +VL+S
Sbjct: 449 KLLAEAEQFIKEMPIAPDAVMWRSLLFACRTCGEVGLAEYVAERIQVLEPNKCGGDVLLS 508

Query: 587 NIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            +YA  +RW D   VR  +   R  K+PG S +EV+G VH+F  G
Sbjct: 509 TVYATTSRWVDANKVRTGIYSGRKTKQPGCSFIEVDGCVHEFFAG 553



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/413 (30%), Positives = 216/413 (52%), Gaps = 9/413 (2%)

Query: 69  VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYL 128
           +DN+++   L   A++    +G ++H  ++K GL  D +V N LI MYS C    +AR +
Sbjct: 91  IDNYSLSAALSTAARMPSVVVGAQLHALSVKLGLSSDTFVLNTLINMYSSCSYPSTARSV 150

Query: 129 FDEMPN--RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
            D  P    D VSW+T+I GY   GLP +AL+   +M    +   +V +++ +   A   
Sbjct: 151 LDSAPKGASDTVSWNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTC 210

Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
            + +GK  HA +V N    ++   + ++LI MY+KCG +  A+++F+ +   + V WT M
Sbjct: 211 MMKVGKLCHALLVTN--GFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSM 268

Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
           ISGY +  +  E ++LF +M    V   + TI +++  CG +G L LG+++HAY   +G 
Sbjct: 269 ISGYTQLGQSKEAIKLFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHAYCDIHGL 328

Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
              +++ N+L+DMY KC +I+ A  +F GM  +D   W  +I  +A      +A +LF  
Sbjct: 329 GKDISVKNSLIDMYSKCGDIKKAYDIFCGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQ 388

Query: 367 MKVS-KVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKC 424
           M+    V PNE+T +G+L+ C+  G +E G +  H      G+   +     +VD+  + 
Sbjct: 389 MEEEGGVMPNEITFLGVLTSCSHGGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRA 448

Query: 425 GDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPN 476
             +  A +   E  I  D  MW +++  +    CGE  L  +V      ++PN
Sbjct: 449 KLLAEAEQFIKEMPIAPDAVMWRSLL--FACRTCGEVGLAEYVAERIQVLEPN 499



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 185/344 (53%), Gaps = 13/344 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           +N+++  YI    P+ AL  ++ M K    +D+ T+   L ACA+  M  +GK  H   +
Sbjct: 164 WNTIIAGYIHAGLPNKALQAFSQMAKGQVMLDDVTLLNALVACARTCMMKVGKLCHALLV 223

Query: 99  KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
            NG + + Y+ ++LI MY++CG +  AR +FD MP+R+ V W++MI GY + G  +EA++
Sbjct: 224 TNGFEINCYMGSSLISMYAKCGQVEDARRIFDGMPDRNAVCWTSMISGYTQLGQSKEAIK 283

Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--VAIATALI 216
           + R+M+   ++  +  + ++VS    +  +DLG+ +HA     C    LG  +++  +LI
Sbjct: 284 LFRDMQIAGVKVDDATISTVVSSCGQMGALDLGRYVHA----YCDIHGLGKDISVKNSLI 339

Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPSE 275
           DMYSKCG++  A  +F  + +    SWTV+I G+       E + LFA+M EE  V P+E
Sbjct: 340 DMYSKCGDIKKAYDIFCGMVKRDNFSWTVIIMGFAANGLSGEALDLFAQMEEEGGVMPNE 399

Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRN--GFEFSLAMANALVDMYGKCREIRSARTLF 333
           IT L ++  C   GGL    + H + + +  G    +     +VD+ G+ + +  A    
Sbjct: 400 ITFLGVLTSCSH-GGLVEQGYRHFHRMSSIYGIAPRIEHYGCMVDLLGRAKLLAEAEQFI 458

Query: 334 DGMK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
             M  + D ++W +++  +A   C +     ++  ++  + PN+
Sbjct: 459 KEMPIAPDAVMWRSLL--FACRTCGEVGLAEYVAERIQVLEPNK 500


>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
 gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
 gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 596

 Score =  338 bits (867), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 184/546 (33%), Positives = 300/546 (54%), Gaps = 11/546 (2%)

Query: 91  KEIHGFAIKNGL---DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
           K+IH   + + +     D ++S  L +  +       AR L  ++    +  W ++I G+
Sbjct: 18  KQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLI-GH 76

Query: 148 HRGGLP---EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
             GG+      +    R MR   + PS      ++     + D +  +  HA +V+   D
Sbjct: 77  FSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVKFGLD 135

Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
                 +  +LI  YS  G   +A +LF+      VV+WT MI G++R    +E +  F 
Sbjct: 136 SD--PFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFV 193

Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKC 323
           EM +  V  +E+T++S++   G V  ++ G+ +H   L  G  +  + + ++LVDMYGKC
Sbjct: 194 EMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKC 253

Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
                A+ +FD M S++V+ W A+I+ Y Q+ C DK   +F  M  S V PNE T+  +L
Sbjct: 254 SCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVL 313

Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
           S C   GAL  G+ +H Y+ K  +E++    T L+D+Y KCG +  A  +F     +++ 
Sbjct: 314 SACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVY 373

Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
            W AM+ G+  HG   +A   F  M  S V PN +TF+ +L+AC+H GLV EG+ +F  M
Sbjct: 374 TWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSM 433

Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
                + PK +HY CMVDL GR GLL+EA  +I+ MP+ P  +VWGAL  +  LHK+  +
Sbjct: 434 KGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYEL 493

Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
           G+ AA+++++++P + G   L++N+Y+ +  W++VA VR+ MK+ +V K PGFS +EV G
Sbjct: 494 GKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKG 553

Query: 624 LVHKFI 629
            + +FI
Sbjct: 554 KLCEFI 559



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 202/368 (54%), Gaps = 3/368 (0%)

Query: 59  YAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSE 118
           Y  MR+NG      T P +LKA  ++  ++   + H   +K GLD D +V N+LI  YS 
Sbjct: 92  YRHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLISGYSS 150

Query: 119 CGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISM 178
            G    A  LFD   ++DVV+W+ MI G+ R G   EA+    EM+   +  +E+ ++S+
Sbjct: 151 SGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSV 210

Query: 179 VSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQN 238
           +     V DV  G+++H   +   +  K  V I ++L+DMY KC     A+++F+ +   
Sbjct: 211 LKAAGKVEDVRFGRSVHGLYLETGR-VKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR 269

Query: 239 SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLH 298
           +VV+WT +I+GY++    ++G+ +F EM++ +V P+E T+ S++  C  VG L  G+ +H
Sbjct: 270 NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVH 329

Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
            Y+++N  E +      L+D+Y KC  +  A  +F+ +  K+V  W A+I+ +A      
Sbjct: 330 CYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYAR 389

Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVDVILKTAL 417
            AF+LF  M  S V PNEVT + +LS C   G +E G+ L   ++ +  +E        +
Sbjct: 390 DAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACM 449

Query: 418 VDMYAKCG 425
           VD++ + G
Sbjct: 450 VDLFGRKG 457



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 186/352 (52%), Gaps = 13/352 (3%)

Query: 39  YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
           + +++  +++N   S A+  +  M+K G   +  T+ ++LKA  +V     G+ +HG  +
Sbjct: 172 WTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYL 231

Query: 99  KNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
           + G +  D ++ ++L+ MY +C     A+ +FDEMP+R+VV+W+ +I GY +    ++ +
Sbjct: 232 ETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGM 291

Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
            V  EM   D+ P+E  + S++S  A V  +  G+ +H  +++N  +  +     T LID
Sbjct: 292 LVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIE--INTTAGTTLID 349

Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
           +Y KCG L  A  +F RL++ +V +WT MI+G+       +   LF  M+  +V P+E+T
Sbjct: 350 LYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVT 409

Query: 278 ILSLIIECGFVGGLQLGKWLHAYIL-RNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
            ++++  C   G ++ G+ L   +  R   E        +VD++G+   +  A+ L + M
Sbjct: 410 FMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERM 469

Query: 337 KSKDV-MIWNAVISAYAQAHC-IDKAFEL--FIHMKVSKVRPNEVTMVGLLS 384
             +   ++W A+  +     C + K +EL  +   +V K++P+      LL+
Sbjct: 470 PMEPTNVVWGALFGS-----CLLHKDYELGKYAASRVIKLQPSHSGRYTLLA 516


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  338 bits (867), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 213/639 (33%), Positives = 325/639 (50%), Gaps = 49/639 (7%)

Query: 36  LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT--HLGKEI 93
           L  +  L++ Y +N KP  A   +  M + G   +++   + L+AC +   +   LG +I
Sbjct: 165 LVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQI 224

Query: 94  HGFAIKNGLDGDAYVSNALIQMYSEC-GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
           HG   K     D  V N LI MY  C  S   AR +FD +  R+ +SW+++I  Y R G 
Sbjct: 225 HGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGD 284

Query: 153 PEEALEVMREMRF----MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN-CKDEKL 207
              A ++   M+        +P++    S  S+  +      G+ +HA V+R    D K 
Sbjct: 285 AVSAYDLFSSMQKEGLGFSFKPNDA--FSEFSVLEE--GRRKGREVHAHVIRTGLNDNK- 339

Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR--CNE---------- 255
            VAI   L++MY+K G +A A  +F  + +   VSW  +ISG  +  C+E          
Sbjct: 340 -VAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMP 398

Query: 256 --------------------INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGK 295
                               +++ V+ F +M+      S +T ++++     +   ++  
Sbjct: 399 EYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSH 458

Query: 296 WLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM-KSKDVMIWNAVISAYAQA 354
            +HA +L+       A+ NAL+  YGKC E+     +F  M +++D + WN++IS Y   
Sbjct: 459 QIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHN 518

Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
             + KA +L   M     R +  T   +LS C     LE G  +H    +  LE DV++ 
Sbjct: 519 ELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVG 578

Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
           +ALVDMY+KCG ++ A R F     R++  WN+M++GY  HG GE+AL  F  M   G  
Sbjct: 579 SALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQP 638

Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
           P+ +TF+G+L+ACSH G V EG   F  M     L P++EH+ CMVDLLGRAG LDE  +
Sbjct: 639 PDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGD 698

Query: 535 MIKSMPLRPNMIVWGALLAA--SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVA 592
            I SMP++PN+++W  +L A      +N  +G  AA  +LE+EPQN    VL++N+YA  
Sbjct: 699 FINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASG 758

Query: 593 NRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
            +W DVA  R  MKE  VKKE G S V +   VH F+ G
Sbjct: 759 EKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAG 797



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 144/520 (27%), Positives = 240/520 (46%), Gaps = 69/520 (13%)

Query: 90  GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
            +E+H  +IK G  G+ ++SN LI +Y   G L SA+ LFDEM NR++V+W+ +I GY +
Sbjct: 118 ARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQ 177

Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADV--ADVDLGKAIHACVVRNCKDEKL 207
            G P+EA    R+M      P+  A  S +    +   +   LG  IH  + +     + 
Sbjct: 178 NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKT----RY 233

Query: 208 G--VAIATALIDMYSKCGNLAY-AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
           G  V +   LI MY  C + A  A+ +F+ +   + +SW  +IS Y R  +      LF+
Sbjct: 234 GSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFS 293

Query: 265 EMIEE--------NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF-EFSLAMANA 315
            M +E        N   SE ++L          G + G+ +HA+++R G  +  +A+ N 
Sbjct: 294 SMQKEGLGFSFKPNDAFSEFSVLE--------EGRRKGREVHAHVIRTGLNDNKVAIGNG 345

Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM-KVSKVRP 374
           LV+MY K   I  A ++F+ M  KD + WN++IS   Q  C + A E+F  M +  +V  
Sbjct: 346 LVNMYAKSGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAEMFSLMPEYDQVSW 405

Query: 375 N-------------------------------EVTMVGLLSLCTEAGALEMGKWLHTYIE 403
           N                                VT + +LS  +     E+   +H  + 
Sbjct: 406 NSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVL 465

Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHGCGEEAL 462
           K  L  D  +  AL+  Y KCG++N   ++F+  +  RD   WN+M++GY  +    +A+
Sbjct: 466 KYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAM 525

Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY----GC 518
                M + G + +  TF  +L+AC+    +  G       VH  G+   +E        
Sbjct: 526 DLVWFMMQKGQRLDSFTFATILSACASVATLERGME-----VHACGIRACLESDVVVGSA 580

Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
           +VD+  + G +D A    + MPLR N+  W ++++    H
Sbjct: 581 LVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARH 619



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 6/143 (4%)

Query: 355 HCIDKAFELFIHMKVSKVRPNEV------TMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
            C     +L  H K S    N        T   L++    +   E  + LH    K G  
Sbjct: 72  QCTKSLQDLVDHYKTSTSHCNTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFV 131

Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM 468
            ++ L   L+++Y + GD+  A +LF E   R++  W  +++GY  +G  +EA   F DM
Sbjct: 132 GNLFLSNTLINIYVRIGDLGSAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDM 191

Query: 469 ERSGVKPNGITFIGLLNACSHAG 491
            R+G  PN   F   L AC  +G
Sbjct: 192 VRAGFIPNHYAFGSALRACQESG 214


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.323    0.137    0.415 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,626,709,762
Number of Sequences: 23463169
Number of extensions: 390120686
Number of successful extensions: 1051278
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8646
Number of HSP's successfully gapped in prelim test: 2968
Number of HSP's that attempted gapping in prelim test: 838238
Number of HSP's gapped (non-prelim): 64334
length of query: 638
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 489
effective length of database: 8,863,183,186
effective search space: 4334096577954
effective search space used: 4334096577954
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 80 (35.4 bits)