BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006627
(638 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 238/626 (38%), Positives = 360/626 (57%), Gaps = 35/626 (5%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
YNSL+ Y + + A+ ++ M +G D +T P L ACA+ G +IHG +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
K G D +V N+L+ Y+ECG L SAR +FDEM R+VVSW++MI GY R ++A++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 159 VM-REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
+ R +R ++ P+ V M+ ++S A + D++ G+ ++A +RN E + + +AL+D
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA-FIRNSGIE-VNDLMVSALVD 279
Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
MY KC + AK+LF+ +++ M S Y+R E + +F M++ V P I+
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
+LS I C + + GK H Y+LRNGFE + NAL+DMY KC +A +FD M
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 338 SKDVMIWNAVISAYA-------------------------------QAHCIDKAFELFIH 366
+K V+ WN++++ Y Q ++A E+F
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 367 MKVSK-VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
M+ + V + VTM+ + S C GAL++ KW++ YIEK G+++DV L T LVDM+++CG
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCG 519
Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLN 485
D A +F+ RD+ W A + M G E A+ F DM G+KP+G+ F+G L
Sbjct: 520 DPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALT 579
Query: 486 ACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNM 545
ACSH GLV +GK +F M+ G+ P+ HYGCMVDLLGRAGLL+EA ++I+ MP+ PN
Sbjct: 580 ACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPND 639
Query: 546 IVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVM 605
++W +LLAA ++ N M AA +I + P+ G VL+SN+YA A RWND+A VR M
Sbjct: 640 VIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSM 699
Query: 606 KEIRVKKEPGFSSVEVNGLVHKFIRG 631
KE ++K PG SS+++ G H+F G
Sbjct: 700 KEKGLRKPPGTSSIQIRGKTHEFTSG 725
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 141/509 (27%), Positives = 238/509 (46%), Gaps = 51/509 (10%)
Query: 75 PTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN 134
P+ LK C + K H K GLD D L+ E G+ S + + N
Sbjct: 36 PSSLKNCKTIDEL---KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFEN 92
Query: 135 RDVVS----WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDL 190
+ ++++IRGY GL EA+ + M I P + +S A
Sbjct: 93 SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGN 152
Query: 191 GKAIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
G IH +V K+G A + +L+ Y++CG L A+++F+ +++ +VVSWT M
Sbjct: 153 GIQIHGLIV------KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSM 206
Query: 247 ISGYIRCNEINEGVRLFAEMI-EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNG 305
I GY R + + V LF M+ +E V P+ +T++ +I C + L+ G+ ++A+I +G
Sbjct: 207 ICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG 266
Query: 306 FEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFI 365
E + M +ALVDMY KC I A+ LFD + ++ + NA+ S Y + +A +F
Sbjct: 267 IEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFN 326
Query: 366 HMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
M S VRP+ ++M+ +S C++ + GK H Y+ + G E + AL+DMY KC
Sbjct: 327 LMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCH 386
Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHG----------------------------- 456
+ A+R+F + + WN+++AGY +G
Sbjct: 387 RQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQ 446
Query: 457 --CGEEALIFFVDME-RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
EEA+ F M+ + GV +G+T + + +AC H G + K ++ + G+ +
Sbjct: 447 GSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIY-YYIEKNGIQLDV 505
Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLR 542
+VD+ R G + A + S+ R
Sbjct: 506 RLGTTLVDMFSRCGDPESAMSIFNSLTNR 534
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 432 bits (1112), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/600 (35%), Positives = 356/600 (59%), Gaps = 2/600 (0%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
Y++++ + K + AL + MR + E + +LK C +GKEIHG +
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
K+G D + L MY++C + AR +FD MP RD+VSW+T++ GY + G+ ALE
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
+++ M +++PS + ++S++ + + + +GK IH +R+ D V I+TAL+DM
Sbjct: 223 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSL--VNISTALVDM 280
Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
Y+KCG+L A+QLF+ + + +VVSW MI Y++ E + +F +M++E V P+++++
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
+ + C +G L+ G+++H + G + ++++ N+L+ MY KC+E+ +A ++F ++S
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
+ ++ WNA+I +AQ A F M+ V+P+ T V +++ E KW+
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
H + + L+ +V + TALVDMYAKCG + A +F R + WNAM+ GYG HG G
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFG 520
Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
+ AL F +M++ +KPNG+TF+ +++ACSH+GLV G F M + ++HYG
Sbjct: 521 KAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGA 580
Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
MVDLLGRAG L+EA + I MP++P + V+GA+L A ++HKN + E AA ++ E+ P +
Sbjct: 581 MVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDD 640
Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWKS 638
GY+VL++NIY A+ W V VR M ++K PG S VE+ VH F G + S
Sbjct: 641 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDS 700
Score = 236 bits (601), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 134/472 (28%), Positives = 252/472 (53%), Gaps = 12/472 (2%)
Query: 91 KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
++I KNGL + + L+ ++ GS+ A +F+ + ++ V + TM++G+ +
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
++AL+ MR+ D+ P ++ + D A++ +GK IH +V++ L +
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKS--GFSLDLF 171
Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
T L +MY+KC + A+++F+R+ + +VSW +++GY + + + M EEN
Sbjct: 172 AMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEEN 231
Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
+ PS ITI+S++ + + +GK +H Y +R+GF+ + ++ ALVDMY KC + +AR
Sbjct: 232 LKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETAR 291
Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
LFDGM ++V+ WN++I AY Q +A +F M V+P +V+++G L C + G
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351
Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
LE G+++H + GL+ +V + +L+ MY KC +V+ A +F + R + WNAM+
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMIL 411
Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
G+ +G +AL +F M VKP+ T++ ++ A + + K +HG+ +
Sbjct: 412 GFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA-----KWIHGVVMR 466
Query: 511 PKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
++ +VD+ + G + A + M R ++ W A++ H
Sbjct: 467 SCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER-HVTTWNAMIDGYGTH 517
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 227/422 (53%), Gaps = 4/422 (0%)
Query: 36 LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
L +N++V Y +N AL + M + + TI ++L A + + + +GKEIHG
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 96 FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
+A+++G D +S AL+ MY++CGSL +AR LFD M R+VVSW++MI Y + P+E
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
A+ + ++M ++P++V+++ + AD+ D++ G+ IH V D V++ +L
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDR--NVSVVNSL 378
Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
I MY KC + A +F +L ++VSW MI G+ + + + F++M V P
Sbjct: 379 ISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDT 438
Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
T +S+I + KW+H ++R+ + ++ + ALVDMY KC I AR +FD
Sbjct: 439 FTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDM 498
Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
M + V WNA+I Y A ELF M+ ++PN VT + ++S C+ +G +E G
Sbjct: 499 MSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAG 558
Query: 396 -KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYG 453
K + E +E+ + A+VD+ + G +N A+ + + + ++ AM+
Sbjct: 559 LKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQ 618
Query: 454 MH 455
+H
Sbjct: 619 IH 620
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 196/378 (51%), Gaps = 4/378 (1%)
Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
T L+ ++ + G++ A ++F ++ V + M+ G+ + +++++ ++ F M ++V
Sbjct: 73 TKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVE 132
Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
P L+ CG L++GK +H ++++GF L L +MY KCR++ AR +
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKV 192
Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
FD M +D++ WN +++ Y+Q A E+ M ++P+ +T+V +L + +
Sbjct: 193 FDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLI 252
Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
+GK +H Y + G + V + TALVDMYAKCG + A +LF + R++ WN+M+ Y
Sbjct: 253 SVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312
Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
+ +EA++ F M GVKP ++ +G L+AC+ G + G+ + K+ LGL
Sbjct: 313 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFI-HKLSVELGLDRN 371
Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP--SMGEIAATQ 570
+ ++ + + +D A M + R ++ W A++ + P ++ + +
Sbjct: 372 VSVVNSLISMYCKCKEVDTAASMFGKLQSR-TLVSWNAMILGFAQNGRPIDALNYFSQMR 430
Query: 571 ILEIEPQNYGYNVLMSNI 588
++P + Y +++ I
Sbjct: 431 SRTVKPDTFTYVSVITAI 448
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 144/295 (48%), Gaps = 7/295 (2%)
Query: 301 ILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKA 360
+ +NG LV ++ + + A +F+ + SK ++++ ++ +A+ +DKA
Sbjct: 60 VFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKA 119
Query: 361 FELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDM 420
+ F+ M+ V P LL +C + L +GK +H + K G +D+ T L +M
Sbjct: 120 LQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENM 179
Query: 421 YAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITF 480
YAKC VN A ++F RD+ WN ++AGY +G AL M +KP+ IT
Sbjct: 180 YAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITI 239
Query: 481 IGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP 540
+ +L A S L++ GK + + G + +VD+ + G L+ A ++ M
Sbjct: 240 VSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYAKCGSLETARQLFDGM- 297
Query: 541 LRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMSNIYAVAN 593
L N++ W +++ A ++NP + ++L+ ++P + +M ++A A+
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS---VMGALHACAD 349
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/603 (36%), Positives = 359/603 (59%), Gaps = 13/603 (2%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
+N L+ K+ S ++ ++ M +G E+D++T + K+ + + H G+++HGF +
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
K+G V N+L+ Y + + SAR +FDEM RDV+SW+++I GY GL E+ L
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVAD---VDLGKAIHACVVRNC--KDEKLGVAIAT 213
V +M I E+ + ++VS+FA AD + LG+A+H+ V+ C ++++
Sbjct: 283 VFVQMLVSGI---EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRF----CN 335
Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
L+DMYSKCG+L AK +F ++ SVVS+T MI+GY R E V+LF EM EE + P
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISP 395
Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
T+ +++ C L GK +H +I N F + ++NAL+DMY KC ++ A +F
Sbjct: 396 DVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVF 455
Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELF-IHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
M+ KD++ WN +I Y++ ++A LF + ++ + P+E T+ +L C A
Sbjct: 456 SEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAF 515
Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
+ G+ +H YI + G D + +LVDMYAKCG + A+ LF + +D+ W M+AGY
Sbjct: 516 DKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGY 575
Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
GMHG G+EA+ F M ++G++ + I+F+ LL ACSH+GLV EG F+ M H + P
Sbjct: 576 GMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPT 635
Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
+EHY C+VD+L R G L +A+ I++MP+ P+ +WGALL ++H + + E A ++
Sbjct: 636 VEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVF 695
Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGG 632
E+EP+N GY VLM+NIYA A +W V +R+ + + ++K PG S +E+ G V+ F+ G
Sbjct: 696 ELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGD 755
Query: 633 MVN 635
N
Sbjct: 756 SSN 758
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/532 (24%), Positives = 257/532 (48%), Gaps = 7/532 (1%)
Query: 28 SYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
S T +T N+ + + ++ +A+ + K ++D T+ ++L+ CA
Sbjct: 53 SITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGK--WDIDPRTLCSVLQLCADSKSL 110
Query: 88 HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
GKE+ F NG D+ + + L MY+ CG L A +FDE+ + W+ ++
Sbjct: 111 KDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNEL 170
Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
+ G ++ + ++M + + F+ + V G+ +H ++++ E+
Sbjct: 171 AKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGER- 229
Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
++ +L+ Y K + A+++F+ + + V+SW +I+GY+ +G+ +F +M+
Sbjct: 230 -NSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML 288
Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
+ TI+S+ C + LG+ +H+ ++ F N L+DMY KC ++
Sbjct: 289 VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLD 348
Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
SA+ +F M + V+ + ++I+ YA+ +A +LF M+ + P+ T+ +L+ C
Sbjct: 349 SAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCA 408
Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
L+ GK +H +I++ L D+ + AL+DMYAKCG + A +FSE +DI WN
Sbjct: 409 RYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNT 468
Query: 448 MMAGYGMHGCGEEAL-IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
++ GY + EAL +F + +E P+ T +L AC+ +G+ + ++
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
G +VD+ + G L AH + + + +++ W ++A +H
Sbjct: 529 -GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK-DLVSWTVMIAGYGMH 578
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 420 bits (1080), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/581 (36%), Positives = 349/581 (60%), Gaps = 47/581 (8%)
Query: 91 KEIHGFAIKNGLDGDAYVSNALIQM--YSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
K+ HG I+ G D Y ++ L M S SL AR +FDE+P + +W+T+IR Y
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 149 RGGLPEEALEVMREMRFMDI------RPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
G P V+ F+D+ P++ ++ A+V+ + LG+++H V++
Sbjct: 107 SGPDP-----VLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSA 161
Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
V +A +LI Y CG+L A ++F + + VVSW MI+G+++ ++ + L
Sbjct: 162 VGSD--VFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALEL 219
Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
F +M E+V S +T++ ++ C + L+ G+ + +YI N +L +ANA++DMY K
Sbjct: 220 FKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTK 279
Query: 323 CREIRSARTLFDGMK-------------------------------SKDVMIWNAVISAY 351
C I A+ LFD M+ KD++ WNA+ISAY
Sbjct: 280 CGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAY 339
Query: 352 AQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
Q ++A +F +++ K ++ N++T+V LS C + GALE+G+W+H+YI+K G+ ++
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMN 399
Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
+ +AL+ MY+KCGD+ + +F+ RD+ +W+AM+ G MHGCG EA+ F M+
Sbjct: 400 FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQE 459
Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
+ VKPNG+TF + ACSH GLV E +S+F +M G+VP+ +HY C+VD+LGR+G L+
Sbjct: 460 ANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLE 519
Query: 531 EAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYA 590
+A + I++MP+ P+ VWGALL A K+H N ++ E+A T++LE+EP+N G +VL+SNIYA
Sbjct: 520 KAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYA 579
Query: 591 VANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
+W +V+ +R+ M+ +KKEPG SS+E++G++H+F+ G
Sbjct: 580 KLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSG 620
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 140/513 (27%), Positives = 268/513 (52%), Gaps = 69/513 (13%)
Query: 8 LNLEQTRQCHAHIIKT-------------------------HFKFSYTNIINPLT-RYNS 41
++L Q +Q H H+I+T + + + I P + +N+
Sbjct: 41 VSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNT 100
Query: 42 LVTSYIKNNKPSSALNIYAFM---RKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
L+ +Y P L+I+AF+ ++ + +T P ++KA A+V LG+ +HG A+
Sbjct: 101 LIRAYASG--PDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAV 158
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
K+ + D +V+N+LI Y CG L SA +F + +DVVSW++MI G+ + G P++ALE
Sbjct: 159 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALE 218
Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
+ ++M D++ S V M+ ++S A + +++ G+ + + + N + + +A A++DM
Sbjct: 219 LFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEEN--RVNVNLTLANAMLDM 276
Query: 219 YSKCGNLAYAKQLF-------------------------------NRLNQNSVVSWTVMI 247
Y+KCG++ AK+LF N + Q +V+W +I
Sbjct: 277 YTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALI 336
Query: 248 SGYIRCNEINEGVRLFAEM-IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
S Y + + NE + +F E+ +++N+ ++IT++S + C VG L+LG+W+H+YI ++G
Sbjct: 337 SAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGI 396
Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
+ + +AL+ MY KC ++ +R +F+ ++ +DV +W+A+I A C ++A ++F
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYK 456
Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCG 425
M+ + V+PN VT + C+ G ++ + L +E G+ + +VD+ + G
Sbjct: 457 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSG 516
Query: 426 DVNGAYRLFSEA--IYRDICMWNAMMAGYGMHG 456
+ A + F EA I +W A++ +H
Sbjct: 517 YLEKAVK-FIEAMPIPPSTSVWGALLGACKIHA 548
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 412 bits (1060), Expect = e-114, Method: Compositional matrix adjust.
Identities = 208/594 (35%), Positives = 346/594 (58%), Gaps = 3/594 (0%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
+N ++ Y K S + ++ MR + + T +L CA L+ LG ++HG +
Sbjct: 207 WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV 266
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
+G+D + + N+L+ MYS+CG A LF M D V+W+ MI GY + GL EE+L
Sbjct: 267 VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLT 326
Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
EM + P + S++ + +++ K IH ++R+ L + + +ALID
Sbjct: 327 FFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRH--SISLDIFLTSALIDA 384
Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
Y KC ++ A+ +F++ N VV +T MISGY+ + + +F +++ + P+EIT+
Sbjct: 385 YFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITL 444
Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
+S++ G + L+LG+ LH +I++ GF+ + A++DMY KC + A +F+ +
Sbjct: 445 VSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSK 504
Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
+D++ WN++I+ AQ+ A ++F M VS + + V++ LS C + GK +
Sbjct: 505 RDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAI 564
Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
H ++ K L DV ++ L+DMYAKCG++ A +F ++I WN+++A G HG
Sbjct: 565 HGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKL 624
Query: 459 EEALIFFVDM-ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
+++L F +M E+SG++P+ ITF+ ++++C H G V EG F M G+ P+ EHY
Sbjct: 625 KDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYA 684
Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
C+VDL GRAG L EA+E +KSMP P+ VWG LL A +LHKN + E+A++++++++P
Sbjct: 685 CVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPS 744
Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
N GY VL+SN +A A W V VR +MKE V+K PG+S +E+N H F+ G
Sbjct: 745 NSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSG 798
Score = 259 bits (662), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 162/525 (30%), Positives = 268/525 (51%), Gaps = 14/525 (2%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
+NS+++S+++N + AL Y M G D T P ++KAC L G + +
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV-ALKNFKGIDFLSDTV 164
Query: 99 KN-GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
+ G+D + +V+++LI+ Y E G + LFD + +D V W+ M+ GY + G + +
Sbjct: 165 SSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVI 224
Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
+ MR I P+ V ++S+ A +DLG +H VV + D +I +L+
Sbjct: 225 KGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVD--FEGSIKNSLLS 282
Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
MYSKCG A +LF +++ V+W MISGY++ + E + F EMI V P IT
Sbjct: 283 MYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAIT 342
Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
SL+ L+ K +H YI+R+ + + +AL+D Y KCR + A+ +F
Sbjct: 343 FSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN 402
Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
S DV+++ A+IS Y + E+F + K+ PNE+T+V +L + AL++G+
Sbjct: 403 SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRE 462
Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
LH +I K+G + + A++DMYAKCG +N AY +F RDI WN+M+
Sbjct: 463 LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDN 522
Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLVPKI 513
A+ F M SG+ + ++ L+AC A L +E F K +HG L +
Sbjct: 523 PSAAIDIFRQMGVSGICYDCVSISAALSAC--ANLPSES---FGKAIHGFMIKHSLASDV 577
Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
++D+ + G L A + K+M + N++ W +++AA H
Sbjct: 578 YSESTLIDMYAKCGNLKAAMNVFKTMKEK-NIVSWNSIIAACGNH 621
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/533 (25%), Positives = 259/533 (48%), Gaps = 24/533 (4%)
Query: 43 VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPT----ILKACAQVLMTHLGKEIHGFAI 98
++S K P+ A + +N S TIP +L+AC+ + GK++H F I
Sbjct: 3 ISSVAKRFAPAIAPYKKSLPLRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLI 62
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR--DVVSWSTMIRGYHRGGLPEEA 156
N + GD+Y ++ MY+ CGS +F + R + W+++I + R GL +A
Sbjct: 63 VNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQA 122
Query: 157 LEVMREMRFMDIRPSEVAMISMVS---LFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
L +M + P +V + +D + + +C + +A+
Sbjct: 123 LAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNE-----FVAS 177
Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
+LI Y + G + +LF+R+ Q V W VM++GY +C ++ ++ F+ M + + P
Sbjct: 178 SLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISP 237
Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
+ +T ++ C + LG LH ++ +G +F ++ N+L+ MY KC A LF
Sbjct: 238 NAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLF 297
Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
M D + WN +IS Y Q+ ++++ F M S V P+ +T LL ++ LE
Sbjct: 298 RMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLE 357
Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
K +H YI + + +D+ L +AL+D Y KC V+ A +FS+ D+ ++ AM++GY
Sbjct: 358 YCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYL 417
Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
+G ++L F + + + PN IT + +L G++ K + +HG +
Sbjct: 418 HNGLYIDSLEMFRWLVKVKISPNEITLVSILPV---IGILLALK--LGRELHGFIIKKGF 472
Query: 514 E---HYGC-MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
+ + GC ++D+ + G ++ A+E+ + + R +++ W +++ NPS
Sbjct: 473 DNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKR-DIVSWNSMITRCAQSDNPS 524
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 89/157 (56%), Gaps = 1/157 (0%)
Query: 36 LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
+ +NS++T +++ PS+A++I+ M +G D +I L ACA + GK IHG
Sbjct: 507 IVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHG 566
Query: 96 FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
F IK+ L D Y + LI MY++CG+L +A +F M +++VSW+++I G ++
Sbjct: 567 FMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKD 626
Query: 156 ALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLG 191
+L + EM IRP ++ + ++S V DVD G
Sbjct: 627 SLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEG 663
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 225/604 (37%), Positives = 358/604 (59%), Gaps = 20/604 (3%)
Query: 39 YNSLVTSYIKNNKPSSALNIYA-FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
+N +++ Y + S + ++ FM +G D T P++LKAC V+ G +IH A
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLA 176
Query: 98 IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
+K G D YV+ +LI +YS ++ +AR LFDEMP RD+ SW+ MI GY + G +EAL
Sbjct: 177 LKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
+ +R MD V ++S++S + D + G IH+ +++ + +L V+ LID
Sbjct: 237 TLSNGLRAMD----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVS--NKLID 290
Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINE----GVRLFAEMIEENVFP 273
+Y++ G L +++F+R+ ++SW +I Y E+NE + LF EM + P
Sbjct: 291 LYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY----ELNEQPLRAISLFQEMRLSRIQP 346
Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTL 332
+T++SL +G ++ + + + LR G F + + NA+V MY K + SAR +
Sbjct: 347 DCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAV 406
Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELF-IHMKVSKVRPNEVTMVGLLSLCTEAGA 391
F+ + + DV+ WN +IS YAQ +A E++ I + ++ N+ T V +L C++AGA
Sbjct: 407 FNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGA 466
Query: 392 LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAG 451
L G LH + K GL +DV + T+L DMY KCG + A LF + + WN ++A
Sbjct: 467 LRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIAC 526
Query: 452 YGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
+G HG GE+A++ F +M GVKP+ ITF+ LL+ACSH+GLV EG+ F+ M G+ P
Sbjct: 527 HGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP 586
Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
++HYGCMVD+ GRAG L+ A + IKSM L+P+ +WGALL+A ++H N +G+IA+ +
Sbjct: 587 SLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHL 646
Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
E+EP++ GY+VL+SN+YA A +W V +R + ++K PG+SS+EV+ V F G
Sbjct: 647 FEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTG 706
Query: 632 GMVN 635
+
Sbjct: 707 NQTH 710
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 144/534 (26%), Positives = 263/534 (49%), Gaps = 30/534 (5%)
Query: 64 KNGSEVDNFT-IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSL 122
KNG+E + T+ + C + K +H + + + +S L+ +Y G++
Sbjct: 46 KNGNESKEIDDVHTLFRYCTNL---QSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNV 102
Query: 123 VSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE-MRFMDIRPSEVAMISMVSL 181
AR+ FD + NRDV +W+ MI GY R G E + M + P S++
Sbjct: 103 ALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA 162
Query: 182 FADVADVDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
V D G IH C K G V +A +LI +YS+ + A+ LF+ +
Sbjct: 163 CRTVID---GNKIH------CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPV 213
Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
+ SW MISGY + E + L + + +T++SL+ C G G +
Sbjct: 214 RDMGSWNAMISGYCQSGNAKEALTLSNGLRAMD----SVTVVSLLSACTEAGDFNRGVTI 269
Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
H+Y +++G E L ++N L+D+Y + +R + +FD M +D++ WN++I AY
Sbjct: 270 HSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQP 329
Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG--LEVDVILKT 415
+A LF M++S+++P+ +T++ L S+ ++ G + + + + ++G LE D+ +
Sbjct: 330 LRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE-DITIGN 388
Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSG-VK 474
A+V MYAK G V+ A +F+ D+ WN +++GY +G EA+ + ME G +
Sbjct: 389 AVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIA 448
Query: 475 PNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHE 534
N T++ +L ACS AG + +G + +++ GL + + D+ G+ G L++A
Sbjct: 449 ANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALS 507
Query: 535 MIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILE--IEPQNYGYNVLMS 586
+ +P R N + W L+A H + + ++L+ ++P + + L+S
Sbjct: 508 LFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLS 560
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 405 bits (1041), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/596 (35%), Positives = 337/596 (56%), Gaps = 12/596 (2%)
Query: 34 NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLGK 91
+ L YN ++ Y++ A++++ M G + D +T P + KA ++ LG
Sbjct: 78 SSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGL 137
Query: 92 EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
+HG +++ D YV NAL+ MY G + AR +FD M NRDV+SW+TMI GY+R G
Sbjct: 138 VVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNG 197
Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG--V 209
+AL + M + ++SM+ + + D+++G+ +H V ++++LG +
Sbjct: 198 YMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV----EEKRLGDKI 253
Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
+ AL++MY KCG + A+ +F+R+ + V++WT MI+GY ++ + L M E
Sbjct: 254 EVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFE 313
Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
V P+ +TI SL+ CG + GK LH + +R + + +L+ MY KC+ +
Sbjct: 314 GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLC 373
Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
+F G W+A+I+ Q + A LF M+ V PN T+ LL
Sbjct: 374 FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAAL 433
Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS----EAIYRDICMW 445
L +H Y+ K G + T LV +Y+KCG + A+++F+ + +D+ +W
Sbjct: 434 ADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLW 493
Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
A+++GYGMHG G AL F++M RSGV PN ITF LNACSH+GLV EG ++F M+
Sbjct: 494 GALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLE 553
Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
+ + HY C+VDLLGRAG LDEA+ +I ++P P VWGALLAA H+N +GE
Sbjct: 554 HYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGE 613
Query: 566 IAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
+AA ++ E+EP+N G VL++NIYA RW D+ VR +M+ + ++K+PG S++E+
Sbjct: 614 MAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 139/475 (29%), Positives = 247/475 (52%), Gaps = 13/475 (2%)
Query: 91 KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
K +H I G ++ + L Y+ CG + AR LF+EMP ++S++ +IR Y R
Sbjct: 35 KALHCHVITGG-RVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVRE 93
Query: 151 GLPEEALEVMREMRFMDIR--PSEVAMISMVSLFADVADVDLGKAIHACVVRNC--KDEK 206
GL +A+ V M ++ P + ++ + LG +H ++R+ +D+
Sbjct: 94 GLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDK- 152
Query: 207 LGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
+ AL+ MY G + A+ +F+ + V+SW MISGY R +N+ + +F M
Sbjct: 153 ---YVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM 209
Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
+ E+V TI+S++ CG + L++G+ +H + + + NALV+MY KC +
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRM 269
Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
AR +FD M+ +DV+ W +I+ Y + ++ A EL M+ VRPN VT+ L+S+C
Sbjct: 270 DEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVC 329
Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
+A + GK LH + +Q + D+I++T+L+ MYAKC V+ +R+FS A W+
Sbjct: 330 GDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWS 389
Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
A++AG + +AL F M R V+PN T LL A + + + ++ +
Sbjct: 390 AIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTK- 448
Query: 507 LGLVPKIEHYGCMVDLLGRAGLLDEAHEM---IKSMPLRPNMIVWGALLAASKLH 558
G + ++ +V + + G L+ AH++ I+ ++++WGAL++ +H
Sbjct: 449 TGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMH 503
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 171/323 (52%), Gaps = 5/323 (1%)
Query: 177 SMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLN 236
S+++ FA + KA+H V+ ++ I + L Y+ CG++ YA++LF +
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITG---GRVSGHILSTLSVTYALCGHITYARKLFEEMP 76
Query: 237 QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV--FPSEITILSLIIECGFVGGLQLG 294
Q+S++S+ ++I Y+R ++ + +F M+ E V P T + G + ++LG
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
Query: 295 KWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQA 354
+H ILR+ F + NAL+ MY ++ AR +FD MK++DV+ WN +IS Y +
Sbjct: 137 LVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196
Query: 355 HCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
++ A +F M V + T+V +L +C LEMG+ +H +E++ L + +K
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK 256
Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVK 474
ALV+MY KCG ++ A +F RD+ W M+ GY G E AL M+ GV+
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316
Query: 475 PNGITFIGLLNACSHAGLVTEGK 497
PN +T L++ C A V +GK
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGK 339
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 226/663 (34%), Positives = 349/663 (52%), Gaps = 53/663 (7%)
Query: 16 CHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIP 75
C +H + +F ++ + +NSL+ SY N + L ++ M DN+T P
Sbjct: 74 CLSHAVSLLRRFPPSDA--GVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFP 131
Query: 76 TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
+ KAC ++ G+ H ++ G + +V NAL+ MYS C SL AR +FDEM
Sbjct: 132 FVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVW 191
Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
DVVSW+++I Y + G P+ ALE+ M RP + +++++ A + LGK +
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQL 251
Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
H V + + + V L+DMY+KCG + A +F+ ++ VVSW M++GY +
Sbjct: 252 HCFAVTSEMIQNMFVG--NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIG 309
Query: 255 EINEGVRLFAEMIEENVF-----------------------------------PSEITIL 279
+ VRLF +M EE + P+E+T++
Sbjct: 310 RFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369
Query: 280 SLIIECGFVGGLQLGKWLHAYILR-------NGFEFSLAMANALVDMYGKCREIRSARTL 332
S++ C VG L GK +H Y ++ NG + N L+DMY KC+++ +AR +
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAM 429
Query: 333 FDGM--KSKDVMIWNAVISAYAQAHCIDKAFELFIHM--KVSKVRPNEVTMVGLLSLCTE 388
FD + K +DV+ W +I Y+Q +KA EL M + + RPN T+ L C
Sbjct: 430 FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS 489
Query: 389 AGALEMGKWLHTY-IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
AL +GK +H Y + Q V + + L+DMYAKCG ++ A +F + ++ W +
Sbjct: 490 LAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTS 549
Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
+M GYGMHG GEEAL F +M R G K +G+T + +L ACSH+G++ +G F++M
Sbjct: 550 LMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVF 609
Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
G+ P EHY C+VDLLGRAG L+ A +I+ MP+ P +VW A L+ ++H +GE A
Sbjct: 610 GVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYA 669
Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE-VNGLVH 626
A +I E+ + G L+SN+YA A RW DV +R +M+ VKK PG S VE + G
Sbjct: 670 AEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTT 729
Query: 627 KFI 629
F+
Sbjct: 730 FFV 732
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 132/500 (26%), Positives = 222/500 (44%), Gaps = 52/500 (10%)
Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRD--VVSWSTMIRGYHRGGLPEEALEVMREMRF 165
+++ LI Y G L A L P D V W+++IR Y G + L + M
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 166 MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNL 225
+ P + +++ V G++ HA + V + AL+ MYS+C +L
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSL--VTGFISNVFVGNALVAMYSRCRSL 178
Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPSEITILSLIIE 284
+ A+++F+ ++ VVSW +I Y + + + +F+ M E P IT+++++
Sbjct: 179 SDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPP 238
Query: 285 CGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIW 344
C +G LGK LH + + + ++ + N LVDMY KC + A T+F M KDV+ W
Sbjct: 239 CASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298
Query: 345 NAVISAYAQAHCIDKAFELFIHMKVSK--------------------------------- 371
NA+++ Y+Q + A LF M+ K
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 372 --VRPNEVTMVGLLSLCTEAGALEMGKWLHTY-------IEKQGLEVDVILKTALVDMYA 422
++PNEVT++ +LS C GAL GK +H Y + K G + ++ L+DMYA
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418
Query: 423 KCGDVNGAYRLFS--EAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM--ERSGVKPNGI 478
KC V+ A +F RD+ W M+ GY HG +AL +M E +PN
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 479 TFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKS 538
T L AC+ + GK + + + C++D+ + G + +A + +
Sbjct: 479 TISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDN 538
Query: 539 MPLRPNMIVWGALLAASKLH 558
M + N + W +L+ +H
Sbjct: 539 M-MAKNEVTWTSLMTGYGMH 557
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/456 (26%), Positives = 196/456 (42%), Gaps = 58/456 (12%)
Query: 179 VSLFADVADVDLGKAIHAC----VVRNCKDEKLGVAIATA-----LIDMYSKCGNLAYAK 229
VSLF+ A IH C V+ + L I T LI Y G L++A
Sbjct: 20 VSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAV 79
Query: 230 QLFNRL--NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
L R + V W +I Y N+ + LF M + P T + CG
Sbjct: 80 SLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGE 139
Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
+ ++ G+ HA L GF ++ + NALV MY +CR + AR +FD M DV+ WN++
Sbjct: 140 ISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSI 199
Query: 348 ISAYAQAHCIDKAFELFIHMKVS-KVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
I +YA+ A E+F M RP+ +T+V +L C G +GK LH +
Sbjct: 200 IESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSE 259
Query: 407 LEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
+ ++ + LVDMYAKCG ++ A +FS +D+ WNAM+AGY G E+A+ F
Sbjct: 260 MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFE 319
Query: 467 DMER-----------------------------------SGVKPNGITFIGLLNACSHAG 491
M+ SG+KPN +T I +L+ C+ G
Sbjct: 320 KMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVG 379
Query: 492 LVTEGKSV--------FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM-PLR 542
+ GK + D +G G + + ++D+ + +D A M S+ P
Sbjct: 380 ALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ--LIDMYAKCKKVDTARAMFDSLSPKE 437
Query: 543 PNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
+++ W ++ H + + +++ E + Q
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQT 473
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/598 (34%), Positives = 343/598 (57%), Gaps = 6/598 (1%)
Query: 36 LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
L ++N+L+ S + + L ++ M ++ + DNFT+P LKAC ++ + G+ IHG
Sbjct: 25 LYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHG 84
Query: 96 FAIKN-GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
F K+ L D YV ++LI MY +CG ++ A +FDE+ D+V+WS+M+ G+ + G P
Sbjct: 85 FVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPY 144
Query: 155 EALEVMREMRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
+A+E R M D+ P V +I++VS +++ LG+ +H V+R L ++
Sbjct: 145 QAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDL--SLVN 202
Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
+L++ Y+K A LF + + V+SW+ +I+ Y++ E + +F +M+++ P
Sbjct: 203 SLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEP 262
Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
+ T+L ++ C L+ G+ H +R G E + ++ ALVDMY KC A +F
Sbjct: 263 NVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVF 322
Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELF-IHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
+ KDV+ W A+IS + ++ E F I + + RP+ + MV +L C+E G L
Sbjct: 323 SRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFL 382
Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
E K H+Y+ K G + + + +LV++Y++CG + A ++F+ +D +W +++ GY
Sbjct: 383 EQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGY 442
Query: 453 GMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
G+HG G +AL F M +S VKPN +TF+ +L+ACSHAGL+ EG +F MV+ L P
Sbjct: 443 GIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAP 502
Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQI 571
+EHY +VDLLGR G LD A E+ K MP P + G LL A ++H+N M E A ++
Sbjct: 503 NLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKL 562
Query: 572 LEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
E+E + GY +LMSN+Y V W +V +R +K+ +KK S +E+ VH+F+
Sbjct: 563 FELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFV 620
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 170/333 (51%), Gaps = 4/333 (1%)
Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
A+Q+F + + S+ W ++ R + E + F+ M + P T+ + CG
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 288 VGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
+ + G+ +H ++ ++ L + ++L+ MY KC + A +FD ++ D++ W++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 347 VISAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
++S + + +A E F M S V P+ VT++ L+S CT+ +G+ +H ++ ++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
G D+ L +L++ YAK A LF +D+ W+ ++A Y +G EAL+ F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
DM G +PN T + +L AC+ A + +G+ + + GL +++ +VD+ +
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALVDMYMK 311
Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
+EA+ + +P R +++ W AL++ L+
Sbjct: 312 CFSPEEAYAVFSRIP-RKDVVSWVALISGFTLN 343
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 164/351 (46%), Gaps = 45/351 (12%)
Query: 14 RQCHAHIIKTHFKFSYTNIINPLTRYNSLVTS---------------------------- 45
R H +I+ F N L+ NSL+
Sbjct: 183 RCVHGFVIRRGFS-------NDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTV 235
Query: 46 ---YIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
Y++N + AL ++ M +G+E + T+ +L+ACA G++ H AI+ GL
Sbjct: 236 IACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGL 295
Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
+ + VS AL+ MY +C S A +F +P +DVVSW +I G+ G+ ++E
Sbjct: 296 ETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSI 355
Query: 163 MRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
M + RP + M+ ++ +++ ++ K H+ V++ D I +L+++YS+
Sbjct: 356 MLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS--NPFIGASLVELYSR 413
Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN-VFPSEITILS 280
CG+L A ++FN + V WT +I+GY + + + F M++ + V P+E+T LS
Sbjct: 414 CGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLS 473
Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFS--LAMANALVDMYGKCREIRSA 329
++ C G + G + ++ N + + L LVD+ G+ ++ +A
Sbjct: 474 ILSACSHAGLIHEGLRIFK-LMVNDYRLAPNLEHYAVLVDLLGRVGDLDTA 523
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 116/242 (47%), Gaps = 15/242 (6%)
Query: 321 GKCREIRS---ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEV 377
G CR+ S AR +F M + + WN ++ + ++ ++ F HM + +P+
Sbjct: 2 GFCRKFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNF 61
Query: 378 TMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
T+ L C E + G+ +H +++K L D+ + ++L+ MY KCG + A R+F E
Sbjct: 62 TLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDE 121
Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDM-ERSGVKPNGITFIGLLNACSHAGLVTE 495
DI W++M++G+ +G +A+ FF M S V P+ +T I L++AC+
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKL----- 176
Query: 496 GKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGAL 551
S + VHG G + +++ ++ EA + K M ++I W +
Sbjct: 177 SNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFK-MIAEKDVISWSTV 235
Query: 552 LA 553
+A
Sbjct: 236 IA 237
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/596 (34%), Positives = 328/596 (55%), Gaps = 9/596 (1%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFA 97
+N L+ + N P S+L+++A +RK+ + ++ T + A + G+ IHG A
Sbjct: 86 FNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQA 145
Query: 98 IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
+ +G D + + + +++MY + + AR +FD MP +D + W+TMI GY + + E++
Sbjct: 146 VVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESI 205
Query: 158 EVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRN-CKDEKLGVAIATAL 215
+V R++ R ++ ++ A++ ++ LG IH+ + C + T
Sbjct: 206 QVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY---VLTGF 262
Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
I +YSKCG + LF + +V++ MI GY E + LF E++
Sbjct: 263 ISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS 322
Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
T++SL+ G L L +H Y L++ F +++ AL +Y K EI SAR LFD
Sbjct: 323 STLVSLV---PVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDE 379
Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
K + WNA+IS Y Q + A LF M+ S+ PN VT+ +LS C + GAL +G
Sbjct: 380 SPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLG 439
Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
KW+H + E + + TAL+ MYAKCG + A RLF ++ WN M++GYG+H
Sbjct: 440 KWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLH 499
Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
G G+EAL F +M SG+ P +TF+ +L ACSHAGLV EG +F+ M+H G P ++H
Sbjct: 500 GQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKH 559
Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
Y CMVD+LGRAG L A + I++M + P VW LL A ++HK+ ++ + ++ E++
Sbjct: 560 YACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELD 619
Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
P N GY+VL+SNI++ + A VR+ K+ ++ K PG++ +E+ H F G
Sbjct: 620 PDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSG 675
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 133/287 (46%), Gaps = 2/287 (0%)
Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
+++ T L S G + YA+ +F + + V + V++ G+ + + +FA + +
Sbjct: 52 ISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRK 111
Query: 269 E-NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
++ P+ T I + G+ +H + +G + L + + +V MY K +
Sbjct: 112 STDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVE 171
Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM-KVSKVRPNEVTMVGLLSLC 386
AR +FD M KD ++WN +IS Y + ++ ++F + S R + T++ +L
Sbjct: 172 DARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAV 231
Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
E L +G +H+ K G + T + +Y+KCG + LF E DI +N
Sbjct: 232 AELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYN 291
Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLV 493
AM+ GY +G E +L F ++ SG + T + L+ H L+
Sbjct: 292 AMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI 338
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 1/201 (0%)
Query: 36 LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
L +N++++ Y +N A++++ M+K+ + TI IL ACAQ+ LGK +H
Sbjct: 385 LPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD 444
Query: 96 FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
+ YVS ALI MY++CGS+ AR LFD M ++ V+W+TMI GY G +E
Sbjct: 445 LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQE 504
Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
AL + EM I P+ V + ++ + V G I ++ E V +
Sbjct: 505 ALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEP-SVKHYACM 563
Query: 216 IDMYSKCGNLAYAKQLFNRLN 236
+D+ + G+L A Q ++
Sbjct: 564 VDILGRAGHLQRALQFIEAMS 584
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 89/193 (46%), Gaps = 2/193 (1%)
Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
HA I+ +GF +++ L I AR +F ++ DV ++N ++ ++
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99
Query: 358 DKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
+ +F H+ K + ++PN T +S + G+ +H G + +++L +
Sbjct: 100 HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSN 159
Query: 417 LVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDM-ERSGVKP 475
+V MY K V A ++F +D +WN M++GY + E++ F D+ S +
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 476 NGITFIGLLNACS 488
+ T + +L A +
Sbjct: 220 DTTTLLDILPAVA 232
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 392 bits (1007), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/578 (36%), Positives = 326/578 (56%), Gaps = 6/578 (1%)
Query: 55 ALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQ 114
A+ Y+ M G + D FT P ++K+ A + GK+IH IK G D YV N+LI
Sbjct: 114 AVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLIS 173
Query: 115 MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVA 174
+Y + G A +F+EMP RD+VSW++MI GY G +L + +EM +P +
Sbjct: 174 LYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFS 233
Query: 175 MISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNR 234
+S + + V +GK IH VR+ + E V + T+++DMYSK G ++YA+++FN
Sbjct: 234 TMSALGACSHVYSPKMGKEIHCHAVRS-RIETGDVMVMTSILDMYSKYGEVSYAERIFNG 292
Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN-VFPSEITILSLIIECGFVGGLQL 293
+ Q ++V+W VMI Y R + + F +M E+N + P IT ++L+ +
Sbjct: 293 MIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLP----ASAILE 348
Query: 294 GKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQ 353
G+ +H Y +R GF + + AL+DMYG+C +++SA +FD M K+V+ WN++I+AY Q
Sbjct: 349 GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ 408
Query: 354 AHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVIL 413
A ELF + S + P+ T+ +L E+ +L G+ +H YI K + I+
Sbjct: 409 NGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTII 468
Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
+LV MYA CGD+ A + F+ + +D+ WN+++ Y +HG G ++ F +M S V
Sbjct: 469 LNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRV 528
Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
PN TF LL ACS +G+V EG F+ M G+ P IEHYGCM+DL+GR G A
Sbjct: 529 NPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAK 588
Query: 534 EMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVAN 593
++ MP P +WG+LL AS+ HK+ ++ E AA QI ++E N G VL+ N+YA A
Sbjct: 589 RFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAG 648
Query: 594 RWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
RW DV ++ +M+ + + S+VE G H F G
Sbjct: 649 RWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNG 686
Score = 190 bits (482), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 218/404 (53%), Gaps = 9/404 (2%)
Query: 36 LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
+ +NS+++ Y+ S+L ++ M K G + D F+ + L AC+ V +GKEIH
Sbjct: 196 IVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHC 255
Query: 96 FAIKNGLD-GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
A+++ ++ GD V +++ MYS+ G + A +F+ M R++V+W+ MI Y R G
Sbjct: 256 HAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVT 315
Query: 155 EALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
+A ++M + ++P + I+++ A + G+ IH +R + + + T
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMR--RGFLPHMVLET 369
Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
ALIDMY +CG L A+ +F+R+ + +V+SW +I+ Y++ + + LF E+ + ++ P
Sbjct: 370 ALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVP 429
Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
TI S++ L G+ +HAYI+++ + + + N+LV MY C ++ AR F
Sbjct: 430 DSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCF 489
Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
+ + KDV+ WN++I AYA + LF M S+V PN+ T LL+ C+ +G ++
Sbjct: 490 NHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVD 549
Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
G ++ + + G++ + ++D+ + G+ + A R E
Sbjct: 550 EGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEE 593
Score = 185 bits (470), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 222/437 (50%), Gaps = 18/437 (4%)
Query: 128 LFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVAD 187
LFDEM D W+ MI+G+ GL EA++ M F ++ ++ A ++
Sbjct: 86 LFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISS 145
Query: 188 VDLGKAIHACVVRNCKDEKLG----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSW 243
++ GK IHA V+ KLG V + +LI +Y K G A+++F + + +VSW
Sbjct: 146 LEEGKKIHAMVI------KLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 244 TVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILR 303
MISGY+ + + LF EM++ P + +S + C V ++GK +H + +R
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 304 NGFEFSLAMA-NALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
+ E M +++DMY K E+ A +F+GM ++++ WN +I YA+ + AF
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 363 LFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMY 421
F M + + ++P+ +T + LL A A+ G+ +H Y ++G ++L+TAL+DMY
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLP----ASAILEGRTIHGYAMRRGFLPHMVLETALIDMY 375
Query: 422 AKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFI 481
+CG + A +F +++ WN+++A Y +G AL F ++ S + P+ T
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435
Query: 482 GLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
+L A + + ++EG+ + +V I +V + G L++A + + L
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSRYWSNTI-ILNSLVHMYAMCGDLEDARKCFNHILL 494
Query: 542 RPNMIVWGALLAASKLH 558
+ +++ W +++ A +H
Sbjct: 495 K-DVVSWNSIIMAYAVH 510
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 172/333 (51%), Gaps = 16/333 (4%)
Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
A QLF+ +N+ W VMI G+ C E V+ ++ M+ V T +I
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
+ L+ GK +HA +++ GF + + N+L+ +Y K A +F+ M +D++ WN++
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
IS Y + LF M +P+ + + L C+ + +MGK +H + + +
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 408 EV-DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV 466
E DV++ T+++DMY+K G+V+ A R+F+ I R+I WN M+ Y +G +A + F
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 467 DM-ERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL----GLVPKIEHYGCMVD 521
M E++G++P+ IT I LL A + + EG++ +HG G +P + ++D
Sbjct: 323 KMSEQNGLQPDVITSINLLPASA----ILEGRT-----IHGYAMRRGFLPHMVLETALID 373
Query: 522 LLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
+ G G L A + M + N+I W +++AA
Sbjct: 374 MYGECGQLKSAEVIFDRMAEK-NVISWNSIIAA 405
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 11/238 (4%)
Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
+ R + A LFD M D +WN +I + +A + + M + V+ + T
Sbjct: 74 FADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTY 133
Query: 380 VGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIY 439
++ +LE GK +H + K G DV + +L+ +Y K G A ++F E
Sbjct: 134 PFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPE 193
Query: 440 RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
RDI WN+M++GY G G +L+ F +M + G KP+ + + L ACSH GK
Sbjct: 194 RDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKE- 252
Query: 500 FDKMVHGLGLVPKIEHYGCMV-----DLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
+H + +IE MV D+ + G + A + M R N++ W ++
Sbjct: 253 ----IHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQR-NIVAWNVMI 305
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/570 (35%), Positives = 333/570 (58%), Gaps = 11/570 (1%)
Query: 65 NGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVS 124
+G D+F I A + + K+IH + GL ++ LI S G +
Sbjct: 16 SGIHSDSFYASLIDSATHKAQL----KQIHARLLVLGLQFSGFLITKLIHASSSFGDITF 71
Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFAD 184
AR +FD++P + W+ +IRGY R ++AL + M+ + P ++ +
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 185 VADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFN--RLNQNSVVS 242
++ + +G+ +HA V R D V + LI +Y+KC L A+ +F L + ++VS
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDAD--VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVS 189
Query: 243 WTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYIL 302
WT ++S Y + E E + +F++M + +V P + ++S++ + L+ G+ +HA ++
Sbjct: 190 WTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV 249
Query: 303 RNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE 362
+ G E + +L MY KC ++ +A+ LFD MKS ++++WNA+IS YA+ +A +
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 309
Query: 363 LFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYA 422
+F M VRP+ +++ +S C + G+LE + ++ Y+ + DV + +AL+DM+A
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFA 369
Query: 423 KCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIG 482
KCG V GA +F + RD+ +W+AM+ GYG+HG EA+ + MER GV PN +TF+G
Sbjct: 370 KCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLG 429
Query: 483 LLNACSHAGLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPL 541
LL AC+H+G+V EG F++M H + P+ +HY C++DLLGRAG LD+A+E+IK MP+
Sbjct: 430 LLMACNHSGMVREGWWFFNRMADHKIN--PQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 487
Query: 542 RPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGV 601
+P + VWGALL+A K H++ +GE AA Q+ I+P N G+ V +SN+YA A W+ VA V
Sbjct: 488 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 547
Query: 602 RRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
R MKE + K+ G S VEV G + F G
Sbjct: 548 RVRMKEKGLNKDVGCSWVEVRGRLEAFRVG 577
Score = 262 bits (669), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 141/446 (31%), Positives = 244/446 (54%), Gaps = 18/446 (4%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
+N+++ Y +NN AL +Y+ M+ D+FT P +LKAC+ + +G+ +H
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFD--EMPNRDVVSWSTMIRGYHRGGLPEEA 156
+ G D D +V N LI +Y++C L SAR +F+ +P R +VSW+ ++ Y + G P EA
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEA 206
Query: 157 LEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
LE+ +MR MD++P VA++S+++ F + D+ G++IHA VV K+G+ I L+
Sbjct: 207 LEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV------KMGLEIEPDLL 260
Query: 217 ----DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
MY+KCG +A AK LF+++ +++ W MISGY + E + +F EMI ++V
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR 320
Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
P I+I S I C VG L+ + ++ Y+ R+ + + +++AL+DM+ KC + AR +
Sbjct: 321 PDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLV 380
Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
FD +DV++W+A+I Y +A L+ M+ V PN+VT +GLL C +G +
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMV 440
Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFS-EAIYRDICMWNAMMAG 451
G W + + ++D+ + G ++ AY + + + +W A+++
Sbjct: 441 REGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Query: 452 YGMH---GCGEEAL--IFFVDMERSG 472
H GE A +F +D +G
Sbjct: 501 CKKHRHVELGEYAAQQLFSIDPSNTG 526
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 172/318 (54%), Gaps = 7/318 (2%)
Query: 36 LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA--CAQVLMTHLGKEI 93
+ + ++V++Y +N +P AL I++ MRK + D + ++L A C Q L G+ I
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQ--GRSI 244
Query: 94 HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
H +K GL+ + + +L MY++CG + +A+ LFD+M + +++ W+ MI GY + G
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304
Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
EA+++ EM D+RP +++ S +S A V ++ ++++ V R+ D + V I++
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS--DYRDDVFISS 362
Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
ALIDM++KCG++ A+ +F+R VV W+ MI GY E + L+ M V P
Sbjct: 363 ALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHP 422
Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
+++T L L++ C G ++ G W + + ++D+ G+ + A +
Sbjct: 423 NDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVI 482
Query: 334 DGMKSKD-VMIWNAVISA 350
M + V +W A++SA
Sbjct: 483 KCMPVQPGVTVWGALLSA 500
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/595 (33%), Positives = 344/595 (57%), Gaps = 8/595 (1%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
+ ++++ +K + +L ++ + ++ D + + T+L AC+ + GK+IH +
Sbjct: 217 WTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL 276
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
+ GL+ DA + N LI Y +CG +++A LF+ MPN++++SW+T++ GY + L +EA+E
Sbjct: 277 RYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAME 336
Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALID 217
+ M ++P A S+++ A + + G +HA ++ N ++ + +LID
Sbjct: 337 LFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY---VTNSLID 393
Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN---EINEGVRLFAEMIEENVFPS 274
MY+KC L A+++F+ VV + MI GY R E++E + +F +M + PS
Sbjct: 394 MYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPS 453
Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
+T +SL+ + L L K +H + + G + +AL+D+Y C ++ +R +FD
Sbjct: 454 LLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFD 513
Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
MK KD++IWN++ + Y Q ++A LF+ +++S+ RP+E T +++ ++++
Sbjct: 514 EMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQL 573
Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
G+ H + K+GLE + + AL+DMYAKCG A++ F A RD+ WN++++ Y
Sbjct: 574 GQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYAN 633
Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
HG G++AL M G++PN ITF+G+L+ACSHAGLV +G F+ M+ G+ P+ E
Sbjct: 634 HGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETE 692
Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
HY CMV LLGRAG L++A E+I+ MP +P IVW +LL+ N + E AA +
Sbjct: 693 HYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILS 752
Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
+P++ G ++SNIYA W + VR MK V KEPG S + +N VH F+
Sbjct: 753 DPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFL 807
Score = 246 bits (629), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 160/500 (32%), Positives = 261/500 (52%), Gaps = 21/500 (4%)
Query: 86 MTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIR 145
+ H +HG I GL+ D Y+SN LI +YS G +V AR +F++MP R++VSWSTM+
Sbjct: 59 LLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVS 118
Query: 146 GYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFA--DVADVDLGKAIHACVVRNC 202
+ G+ EE+L V E R P+E + S + + D + + + +V++
Sbjct: 119 ACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSG 178
Query: 203 KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
D V + T LID Y K GN+ YA+ +F+ L + S V+WT MISG ++ ++L
Sbjct: 179 FDRD--VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQL 236
Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
F +++E+NV P + +++ C + L+ GK +HA+ILR G E ++ N L+D Y K
Sbjct: 237 FYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVK 296
Query: 323 CREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGL 382
C + +A LF+GM +K+++ W ++S Y Q +A ELF M ++P+ +
Sbjct: 297 CGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSI 356
Query: 383 LSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDI 442
L+ C AL G +H Y K L D + +L+DMYAKC + A ++F D+
Sbjct: 357 LTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADV 416
Query: 443 CMWNAMMAGYGMHGCG---EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
++NAM+ GY G EAL F DM ++P+ +TF+ LL A A L + G S
Sbjct: 417 VLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA--SASLTSLGLS- 473
Query: 500 FDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAAS 555
K +HGL GL I ++D+ L ++ + M ++ ++++W ++ A
Sbjct: 474 --KQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAG- 529
Query: 556 KLHKNPSMGEIAATQILEIE 575
+ S E A LE++
Sbjct: 530 --YVQQSENEEALNLFLELQ 547
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 113/222 (50%), Gaps = 11/222 (4%)
Query: 33 INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
+ L +NS+ Y++ ++ ALN++ ++ + D FT ++ A + LG+E
Sbjct: 517 VKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE 576
Query: 93 IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
H +K GL+ + Y++NAL+ MY++CGS A FD +RDVV W+++I Y G
Sbjct: 577 FHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGE 636
Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
++AL+++ +M I P+ + + ++S + V+ G ++R G+
Sbjct: 637 GKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR------FGIEPE 690
Query: 213 T----ALIDMYSKCGNLAYAKQLFNRL-NQNSVVSWTVMISG 249
T ++ + + G L A++L ++ + + + W ++SG
Sbjct: 691 TEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSG 732
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 25/185 (13%)
Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
LL L L +H I GLE+D L L+++Y++ G + A ++F + R+
Sbjct: 50 LLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERN 109
Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERS-GVKPNGITFIGLLNACSHAGLVTEG---- 496
+ W+ M++ HG EE+L+ F++ R+ PN + ACS GL G
Sbjct: 110 LVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMV 167
Query: 497 --------KSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
KS FD+ V+ L ++D + G +D A + ++P + + W
Sbjct: 168 FQLQSFLVKSGFDRDVYVGTL---------LIDFYLKDGNIDYARLVFDALP-EKSTVTW 217
Query: 549 GALLA 553
+++
Sbjct: 218 TTMIS 222
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/599 (34%), Positives = 343/599 (57%), Gaps = 16/599 (2%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
+ +L++ Y +N+ L ++ M+ G++ ++FT L A+ + G ++H +
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
KNGLD VSN+LI +Y +CG++ AR LFD+ + VV+W++MI GY GL EAL
Sbjct: 222 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IATA 214
+ MR +R SE + S++ L A++ ++ + +H VV K G I TA
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVV------KYGFLFDQNIRTA 335
Query: 215 LIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
L+ YSKC + A +LF + +VVSWT MISG+++ + E V LF+EM + V P
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
+E T ++ + ++ HA +++ +E S + AL+D Y K ++ A +F
Sbjct: 396 NEFTYSVILTALPVISPSEV----HAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGA-L 392
G+ KD++ W+A+++ YAQ + A ++F + ++PNE T +L++C A +
Sbjct: 452 SGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM 511
Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
GK H + K L+ + + +AL+ MYAK G++ A +F +D+ WN+M++GY
Sbjct: 512 GQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGY 571
Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
HG +AL F +M++ VK +G+TFIG+ AC+HAGLV EG+ FD MV + P
Sbjct: 572 AQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPT 631
Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
EH CMVDL RAG L++A ++I++MP +W +LAA ++HK +G +AA +I+
Sbjct: 632 KEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKII 691
Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
++P++ VL+SN+YA + W + A VR++M E VKKEPG+S +EV + F+ G
Sbjct: 692 AMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAG 750
Score = 235 bits (599), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 151/525 (28%), Positives = 258/525 (49%), Gaps = 16/525 (3%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
Y SL+ + ++ + A ++ + + G E+D ++LK A + G+++H I
Sbjct: 61 YISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCI 120
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
K G D V +L+ Y + + R +FDEM R+VV+W+T+I GY R + +E L
Sbjct: 121 KFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLT 180
Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
+ M+ +P+ + + + A+ G +H VV+N D+ + ++ +LI++
Sbjct: 181 LFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT--IPVSNSLINL 238
Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
Y KCGN+ A+ LF++ SVV+W MISGY E + +F M V SE +
Sbjct: 239 YLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSF 298
Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
S+I C + L+ + LH +++ GF F + AL+ Y KC + A LF +
Sbjct: 299 ASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGC 358
Query: 339 -KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
+V+ W A+IS + Q ++A +LF MK VRPNE T +L+ E
Sbjct: 359 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE---- 414
Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
+H + K E + TAL+D Y K G V A ++FS +DI W+AM+AGY G
Sbjct: 415 VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
E A+ F ++ + G+KPN TF +LN C+ T K HG + +++
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCA----ATNASMGQGKQFHGFAIKSRLDSSL 530
Query: 518 C----MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLH 558
C ++ + + G ++ A E+ K + +++ W ++++ H
Sbjct: 531 CVSSALLTMYAKKGNIESAEEVFKRQREK-DLVSWNSMISGYAQH 574
Score = 196 bits (497), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 229/436 (52%), Gaps = 13/436 (2%)
Query: 1 MKIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYA 60
+ + N +NL +C ++ K F T + + +T +NS+++ Y N AL ++
Sbjct: 229 IPVSNSLINL--YLKC-GNVRKARILFDKTEVKSVVT-WNSMISGYAANGLDLEALGMFY 284
Query: 61 FMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECG 120
MR N + + +++K CA + +++H +K G D + AL+ YS+C
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 121 SLVSARYLFDEMPN-RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMV 179
+++ A LF E+ +VVSW+ MI G+ + EEA+++ EM+ +RP+E ++
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 180 SLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
+ ++ + +HA VV+ + + + TAL+D Y K G + A ++F+ ++
Sbjct: 405 TALPVISPSE----VHAQVVKT--NYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKD 458
Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV-GGLQLGKWLH 298
+V+W+ M++GY + E +++F E+ + + P+E T S++ C + GK H
Sbjct: 459 IVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFH 518
Query: 299 AYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCID 358
+ +++ + SL +++AL+ MY K I SA +F + KD++ WN++IS YAQ
Sbjct: 519 GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAM 578
Query: 359 KAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTAL 417
KA ++F MK KV+ + VT +G+ + CT AG +E G K+ + + + +
Sbjct: 579 KALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCM 638
Query: 418 VDMYAKCGDVNGAYRL 433
VD+Y++ G + A ++
Sbjct: 639 VDLYSRAGQLEKAMKV 654
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 127/442 (28%), Positives = 227/442 (51%), Gaps = 27/442 (6%)
Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
L +A LFD+ P RD S+ +++ G+ R G +EA + + + + S++ +
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 182 FADVADVDLGKAIH-ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSV 240
A + D G+ +H C+ D+ V++ T+L+D Y K N +++F+ + + +V
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDD---VSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159
Query: 241 VSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI---LSLIIECGFVG-GLQLGKW 296
V+WT +ISGY R + +E + LF M E P+ T L ++ E G G GLQ
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ---- 215
Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
+H +++NG + ++ ++N+L+++Y KC +R AR LFD + K V+ WN++IS YA
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTA 416
+A +F M+++ VR +E + ++ LC L + LH + K G D ++TA
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 417 LVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
L+ Y+KC + A RLF E ++ W AM++G+ + EEA+ F +M+R GV+P
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG----CMVDLLGRAGLLDE 531
N T+ +L A + VH + E ++D + G ++E
Sbjct: 396 NEFTYSVILTALP---------VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEE 446
Query: 532 AHEMIKSMPLRPNMIVWGALLA 553
A ++ + + +++ W A+LA
Sbjct: 447 AAKVFSGIDDK-DIVAWSAMLA 467
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 176/382 (46%), Gaps = 33/382 (8%)
Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM------IEENVFPSEITILSL 281
A LF++ S+ ++ G+ R E RLF + ++ ++F S + + +
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
+ + F G+ LH ++ GF +++ +LVD Y K + R +FD MK ++V
Sbjct: 106 LCDELF------GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159
Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
+ W +IS YA+ D+ LF+ M+ +PN T L + E G G +HT
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 219
Query: 402 IEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEA 461
+ K GL+ + + +L+++Y KCG+V A LF + + + WN+M++GY +G EA
Sbjct: 220 VVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA 279
Query: 462 LIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVD 521
L F M + V+ + +F ++ C++ + F + +H + YG + D
Sbjct: 280 LGMFYSMRLNYVRLSESSFASVIKLCANLKELR-----FTEQLH-----CSVVKYGFLFD 329
Query: 522 LLGRAGLLD---------EAHEMIKSMPLRPNMIVWGALLAA--SKLHKNPSMGEIAATQ 570
R L+ +A + K + N++ W A+++ K ++ + +
Sbjct: 330 QNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMK 389
Query: 571 ILEIEPQNYGYNVLMSNIYAVA 592
+ P + Y+V+++ + ++
Sbjct: 390 RKGVRPNEFTYSVILTALPVIS 411
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/596 (34%), Positives = 338/596 (56%), Gaps = 6/596 (1%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
+N+++ Y N + + ++ M+ +G +D+FT ++L CA +G + H I
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
K L + +V NAL+ MY++CG+L AR +F+ M +RD V+W+T+I Y + EA +
Sbjct: 456 KKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFD 515
Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
+ + M I + S + V + GK +H V+ D L ++LIDM
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTG--SSLIDM 573
Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
YSKCG + A+++F+ L + SVVS +I+GY + N + E V LF EM+ V PSEIT
Sbjct: 574 YSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITF 632
Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA-MANALVDMYGKCREIRSARTLFDGMK 337
+++ C L LG H I + GF + +L+ MY R + A LF +
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS 692
Query: 338 S-KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
S K +++W ++S ++Q ++A + + M+ V P++ T V +L +C+ +L G+
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGR 752
Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMH 455
+H+ I ++D + L+DMYAKCGD+ G+ ++F E R ++ WN+++ GY +
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKN 812
Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
G E+AL F M +S + P+ ITF+G+L ACSHAG V++G+ +F+ M+ G+ +++H
Sbjct: 813 GYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDH 872
Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
CMVDLLGR G L EA + I++ L+P+ +W +LL A ++H + GEI+A +++E+E
Sbjct: 873 VACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELE 932
Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
PQN VL+SNIYA W +R+VM++ VKK PG+S ++V H F G
Sbjct: 933 PQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAG 988
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 151/531 (28%), Positives = 250/531 (47%), Gaps = 53/531 (9%)
Query: 32 IINPLTR-YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
I++P T + L + Y+K P A+ ++ MR G D+ T+
Sbjct: 221 IVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV------------- 267
Query: 91 KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
I Y G L AR LF EM + DVV+W+ MI G+ +
Sbjct: 268 ----------------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKR 305
Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
G A+E MR ++ + + S++S VA++DLG +HA + KLG+A
Sbjct: 306 GCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAI------KLGLA 359
Query: 211 ----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM 266
+ ++L+ MYSKC + A ++F L + + V W MI GY E ++ + LF +M
Sbjct: 360 SNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM 419
Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
+ T SL+ C L++G H+ I++ +L + NALVDMY KC +
Sbjct: 420 KSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGAL 479
Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
AR +F+ M +D + WN +I +Y Q +AF+LF M + + + + L C
Sbjct: 480 EDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKAC 539
Query: 387 TEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWN 446
T L GK +H K GL+ D+ ++L+DMY+KCG + A ++FS + N
Sbjct: 540 THVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMN 599
Query: 447 AMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG 506
A++AGY + EEA++ F +M GV P+ ITF ++ AC +T G + F +
Sbjct: 600 ALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLG-TQFHGQITK 657
Query: 507 LGLVPKIEHYGCMVDLLG---RAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
G + E+ G + LLG + + EA + + ++++W +++
Sbjct: 658 RGFSSEGEYLG--ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSG 706
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 227/482 (47%), Gaps = 48/482 (9%)
Query: 85 LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
L +GK +H ++ G+D + + NA++ +Y++C + A FD + +DV +W++M+
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSML 132
Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
Y G P + L + I P++ ++S A +V+ G+ IH ++
Sbjct: 133 SMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMI----- 187
Query: 205 EKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
K+G+ AL+DMY+KC ++ A+++F + + V WT + SGY++ E V
Sbjct: 188 -KMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAV 246
Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
+F M +E P + +++I + Y
Sbjct: 247 LVFERMRDEGHRPDHLAFVTVI-----------------------------------NTY 271
Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
+ +++ AR LF M S DV+ WN +IS + + C A E F +M+ S V+ T+
Sbjct: 272 IRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLG 331
Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
+LS L++G +H K GL ++ + ++LV MY+KC + A ++F +
Sbjct: 332 SVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK 391
Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
+ WNAM+ GY +G + + F+DM+ SG + TF LL+ C+ + + G S F
Sbjct: 392 NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG-SQF 450
Query: 501 DKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
++ L + +VD+ + G L++A ++ + M R N + W ++ + +N
Sbjct: 451 HSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN-VTWNTIIGSYVQDEN 509
Query: 561 PS 562
S
Sbjct: 510 ES 511
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 178/382 (46%), Gaps = 32/382 (8%)
Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG-VRLFAEMIEEN 270
++A+ D +S L+Y+ L R+ + + S + + R EI G +LF +
Sbjct: 10 SSAMFDSFSFVRRLSYSPDLGRRIYGHVLPSHDQI---HQRLLEICLGQCKLFKSRKVFD 66
Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
P + + L++GK +H+ L G + + NA+VD+Y KC ++ A
Sbjct: 67 EMPQRLAL-----------ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAE 115
Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
FD ++ KDV WN+++S Y+ K F+ + +++ PN+ T +LS C
Sbjct: 116 KQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARET 174
Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
+E G+ +H + K GLE + ALVDMYAKC ++ A R+F + + W + +
Sbjct: 175 NVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFS 234
Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
GY G EEA++ F M G +P+ + F+ ++N G + + + +F +M
Sbjct: 235 GYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS----- 289
Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSM---PLRPNMIVWGALLAASKLHKNPSMGEIA 567
P + + M+ G+ G A E +M ++ G++L+A + N +G +
Sbjct: 290 PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVV 349
Query: 568 ATQILEIEPQNYGYNVLMSNIY 589
+ +++ L SNIY
Sbjct: 350 HAEAIKLG--------LASNIY 363
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 85/169 (50%), Gaps = 1/169 (0%)
Query: 27 FSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLM 86
FS + + + +++ + +N AL Y MR +G D T T+L+ C+ +
Sbjct: 688 FSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSS 747
Query: 87 THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR-DVVSWSTMIR 145
G+ IH D D SN LI MY++CG + + +FDEM R +VVSW+++I
Sbjct: 748 LREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLIN 807
Query: 146 GYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
GY + G E+AL++ MR I P E+ + +++ + V G+ I
Sbjct: 808 GYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 387 bits (994), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/597 (36%), Positives = 339/597 (56%), Gaps = 10/597 (1%)
Query: 36 LTRYNSLVTSYIKNNKPSSALNIYAFMR-KNGSEVDNFTIPTILKACAQVLMTHLGKEIH 94
L +N LV Y K A+ +Y M G + D +T P +L+ C + GKE+H
Sbjct: 160 LFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVH 219
Query: 95 GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
++ G + D V NALI MY +CG + SAR LFD MP RD++SW+ MI GY G+
Sbjct: 220 VHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCH 279
Query: 155 EALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
E LE+ MR + + P + + S++S + D LG+ IHA V+ + +++ +
Sbjct: 280 EGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITT--GFAVDISVCNS 337
Query: 215 LIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
L MY G+ A++LF+R+ + +VSWT MISGY ++ + + M +++V P
Sbjct: 338 LTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPD 397
Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
EIT+ +++ C +G L G LH ++ + +AN L++MY KC+ I A +F
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH 457
Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK--VRPNEVTMVGLLSLCTEAGAL 392
+ K+V+ W ++I A ++ FE I ++ K ++PN +T+ L+ C GAL
Sbjct: 458 NIPRKNVISWTSII---AGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGAL 514
Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
GK +H ++ + G+ +D L AL+DMY +CG +N A+ F+ +D+ WN ++ GY
Sbjct: 515 MCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGY 573
Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
G G + F M +S V+P+ ITFI LL CS + +V +G F KM G+ P
Sbjct: 574 SERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPN 632
Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
++HY C+VDLLGRAG L EAH+ I+ MP+ P+ VWGALL A ++H +GE++A I
Sbjct: 633 LKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIF 692
Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
E++ ++ GY +L+ N+YA +W +VA VRR+MKE + + G S VEV G VH F+
Sbjct: 693 ELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFL 749
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 149/517 (28%), Positives = 259/517 (50%), Gaps = 9/517 (1%)
Query: 49 NNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYV 108
N K A+ + M++ VD +++ C G +++ A+ + +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD- 167
NA + M+ G+LV A Y+F +M R++ SW+ ++ GY + G +EA+ + M ++
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAY 227
++P ++ + D+ GK +H VVR +L + + ALI MY KCG++
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR--YGYELDIDVVNALITMYVKCGDVKS 249
Query: 228 AKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF 287
A+ LF+R+ + ++SW MISGY +EG+ LF M +V P +T+ S+I C
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 288 VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAV 347
+G +LG+ +HAY++ GF +++ N+L MY R A LF M+ KD++ W +
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369
Query: 348 ISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL 407
IS Y DKA + + M V+P+E+T+ +LS C G L+ G LH K L
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
VI+ L++MY+KC ++ A +F +++ W +++AG ++ EALIF
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQ 489
Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIEHYGCMVDLLGRA 526
M+ + ++PN IT L AC+ G + GK + ++ G+GL + + ++D+ R
Sbjct: 490 MKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN--ALLDMYVRC 546
Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
G ++ A S + ++ W LL SM
Sbjct: 547 GRMNTAWSQFNSQ--KKDVTSWNILLTGYSERGQGSM 581
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/591 (36%), Positives = 339/591 (57%), Gaps = 4/591 (0%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
+NS+++SY + K L ++ M G +++TI + L AC LGKEIH +
Sbjct: 252 WNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVL 311
Query: 99 KNGL-DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
K+ + YV NALI MY+ CG + A + +M N DVV+W+++I+GY + + +EAL
Sbjct: 312 KSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEAL 371
Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
E +M + EV+M S+++ ++++ G +HA V+++ D L V LID
Sbjct: 372 EFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG--NTLID 429
Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
MYSKC Y + F R++ ++SWT +I+GY + + E + LF ++ ++ + E+
Sbjct: 430 MYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMI 489
Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
+ S++ + + + K +H +ILR G + N LVD+YGKCR + A +F+ +K
Sbjct: 490 LGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIK 548
Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
KDV+ W ++IS+ A +A ELF M + + + V ++ +LS AL G+
Sbjct: 549 GKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGRE 608
Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
+H Y+ ++G ++ + A+VDMYA CGD+ A +F + + + +M+ YGMHGC
Sbjct: 609 IHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGC 668
Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
G+ A+ F M V P+ I+F+ LL ACSHAGL+ EG+ M H L P EHY
Sbjct: 669 GKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV 728
Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
C+VD+LGRA + EA E +K M P VW ALLAA + H +GEIAA ++LE+EP+
Sbjct: 729 CLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPK 788
Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
N G VL+SN++A RWNDV VR MK ++K PG S +E++G VHKF
Sbjct: 789 NPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKF 839
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 149/546 (27%), Positives = 259/546 (47%), Gaps = 30/546 (5%)
Query: 35 PLTRYNSLVTSYIKNNKPSSALNIY------AFMR----KNGSEVDNFTIPTILKACAQV 84
P R N S PS L + AF R +N S V+ F +L+ C +
Sbjct: 36 PSCRRNPFRQSNQPVQVPSPKLACFDGVLTEAFQRLDVSENNSPVEAFAY--VLELCGKR 93
Query: 85 LMTHLGKEIHGFAIKN--GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWST 142
G+++H K + D +++ L+ MY +CGSL A +FDEMP+R +W+T
Sbjct: 94 RAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNT 152
Query: 143 MIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNC 202
MI Y G P AL + MR + + +++ A + D+ G +H+ +V
Sbjct: 153 MIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLV--- 209
Query: 203 KDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQN-SVVSWTVMISGYIRCNEIN 257
KLG I AL+ MY+K +L+ A++LF+ + V W ++S Y +
Sbjct: 210 ---KLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSL 266
Query: 258 EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFS-LAMANAL 316
E + LF EM P+ TI+S + C +LGK +HA +L++ S L + NAL
Sbjct: 267 ETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNAL 326
Query: 317 VDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNE 376
+ MY +C ++ A + M + DV+ WN++I Y Q +A E F M + + +E
Sbjct: 327 IAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDE 386
Query: 377 VTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE 436
V+M +++ L G LH Y+ K G + ++ + L+DMY+KC R F
Sbjct: 387 VSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLR 446
Query: 437 AIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
+D+ W ++AGY + C EAL F D+ + ++ + + +L A S +
Sbjct: 447 MHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIV 506
Query: 497 KSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASK 556
K + ++ L I++ +VD+ G+ + A + +S+ + +++ W +++++S
Sbjct: 507 KEIHCHILRKGLLDTVIQNE--LVDVYGKCRNMGYATRVFESIKGK-DVVSWTSMISSSA 563
Query: 557 LHKNPS 562
L+ N S
Sbjct: 564 LNGNES 569
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 165/321 (51%), Gaps = 13/321 (4%)
Query: 36 LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
L + +++ Y +N+ AL ++ + K E+D + +IL+A + + + KEIH
Sbjct: 452 LISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511
Query: 96 FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
++ GL D + N L+ +Y +C ++ A +F+ + +DVVSW++MI G E
Sbjct: 512 HILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570
Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
A+E+ R M + VA++ ++S A ++ ++ G+ IH ++R K L +IA A+
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLR--KGFCLEGSIAVAV 628
Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
+DMY+ CG+L AK +F+R+ + ++ +T MI+ Y V LF +M ENV P
Sbjct: 629 VDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDH 688
Query: 276 ITILSLIIECGFVGGLQLGKWL-----HAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
I+ L+L+ C G L G+ H Y L E + LVDM G+ + A
Sbjct: 689 ISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYV----CLVDMLGRANCVVEAF 744
Query: 331 TLFDGMKSKDVM-IWNAVISA 350
MK++ +W A+++A
Sbjct: 745 EFVKMMKTEPTAEVWCALLAA 765
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/636 (32%), Positives = 339/636 (53%), Gaps = 76/636 (11%)
Query: 66 GSEVDNFTIPTILKACAQVLMTHLG-KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVS 124
S D+ +L +C + ++ + + +H IK+G + ++ N LI YS+CGSL
Sbjct: 14 SSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLED 73
Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD----------------- 167
R +FD+MP R++ +W++++ G + G +EA + R M D
Sbjct: 74 GRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRC 133
Query: 168 --------------IRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAI 211
+E + S++S + + D++ G +H+ + ++ D V I
Sbjct: 134 EEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSD----VYI 189
Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENV 271
+AL+DMYSKCGN+ A+++F+ + +VVSW +I+ + + E + +F M+E V
Sbjct: 190 GSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRV 249
Query: 272 FPSEITILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSAR 330
P E+T+ S+I C + +++G+ +H +++N + ++NA VDMY KC I+ AR
Sbjct: 250 EPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEAR 309
Query: 331 TLFDGMK-------------------------------SKDVMIWNAVISAYAQAHCIDK 359
+FD M ++V+ WNA+I+ Y Q ++
Sbjct: 310 FIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEE 369
Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGL------EVDVIL 413
A LF +K V P + +L C + L +G H ++ K G E D+ +
Sbjct: 370 ALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFV 429
Query: 414 KTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGV 473
+L+DMY KCG V Y +F + + RD WNAM+ G+ +G G EAL F +M SG
Sbjct: 430 GNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE 489
Query: 474 KPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAH 533
KP+ IT IG+L+AC HAG V EG+ F M G+ P +HY CMVDLLGRAG L+EA
Sbjct: 490 KPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAK 549
Query: 534 EMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVAN 593
MI+ MP++P+ ++WG+LLAA K+H+N ++G+ A ++LE+EP N G VL+SN+YA
Sbjct: 550 SMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELG 609
Query: 594 RWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
+W DV VR+ M++ V K+PG S +++ G H F+
Sbjct: 610 KWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFM 645
Score = 223 bits (567), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 241/456 (52%), Gaps = 40/456 (8%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
+NS+V+ + ++++ AL +A M K G ++ ++ ++L AC+ + + G ++H
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIA 179
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
K+ D Y+ +AL+ MYS+CG++ A+ +FDEM +R+VVSW+++I + + G EAL+
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
V + M + P EV + S++S A ++ + +G+ +H VV+N K + + ++ A +DM
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDK-LRNDIILSNAFVDM 298
Query: 219 YSKCGNLAYAKQLFN-------------------------------RLNQNSVVSWTVMI 247
Y+KC + A+ +F+ ++ + +VVSW +I
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALI 358
Query: 248 SGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE 307
+GY + E E + LF + E+V P+ + +++ C + L LG H ++L++GF+
Sbjct: 359 AGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 418
Query: 308 FS------LAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
F + + N+L+DMY KC + +F M +D + WNA+I +AQ ++A
Sbjct: 419 FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEAL 478
Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-WLHTYIEKQGLEVDVILKTALVDM 420
ELF M S +P+ +TM+G+LS C AG +E G+ + + G+ T +VD+
Sbjct: 479 ELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDL 538
Query: 421 YAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
+ G + A + E + D +W +++A +H
Sbjct: 539 LGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Score = 108 bits (271), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 113/225 (50%), Gaps = 16/225 (7%)
Query: 36 LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIH- 94
+ +N+L+ Y +N + AL+++ +++ +++ ILKACA + HLG + H
Sbjct: 351 VVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHV 410
Query: 95 -----GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
GF ++G + D +V N+LI MY +CG + +F +M RD VSW+ MI G+ +
Sbjct: 411 HVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQ 470
Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
G EALE+ REM +P + MI ++S V+ G+ + + R+ GV
Sbjct: 471 NGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRD-----FGV 525
Query: 210 AIA----TALIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISG 249
A T ++D+ + G L AK + + Q V W +++
Sbjct: 526 APLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/602 (34%), Positives = 330/602 (54%), Gaps = 5/602 (0%)
Query: 33 INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
++ + +N + + N P +L ++ M++ G E +NFT P + KACA++ +
Sbjct: 14 LSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEM 73
Query: 93 IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
+H IK+ D +V A + M+ +C S+ A +F+ MP RD +W+ M+ G+ + G
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
++A + REMR +I P V +++++ + + L +A+HA +R D + V +A
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD--VQVTVA 191
Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQ--NSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
I Y KCG+L AK +F +++ +VVSW M Y E + L+ M+ E
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 251
Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
P T ++L C L G+ +H++ + G + + N + MY K + SAR
Sbjct: 252 FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
LFD M S+ + W +IS YA+ +D+A LF M S +P+ VT++ L+S C + G
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG 371
Query: 391 ALEMGKWLHTYIEKQGLEVD-VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
+LE GKW+ + G + D V++ AL+DMY+KCG ++ A +F + + W M+
Sbjct: 372 SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMI 431
Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
AGY ++G EAL F M KPN ITF+ +L AC+H+G + +G F M +
Sbjct: 432 AGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNI 491
Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAAT 569
P ++HY CMVDLLGR G L+EA E+I++M +P+ +WGALL A K+H+N + E AA
Sbjct: 492 SPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAE 551
Query: 570 QILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
+ +EPQ V M+NIYA A W+ A +R +MK+ +KK PG S ++VNG H F
Sbjct: 552 SLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFT 611
Query: 630 RG 631
G
Sbjct: 612 VG 613
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 152/301 (50%), Gaps = 5/301 (1%)
Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
++L+ +SV +W + I + N+ E + LF EM P+ T + C +
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL 65
Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
+ + +HA+++++ F + + A VDM+ KC + A +F+ M +D WNA++
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLE 408
S + Q+ DKAF LF M+++++ P+ VT++ L+ + +L++ + +H + G++
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVD 185
Query: 409 VDVILKTALVDMYAKCGDVNGAYRLFSEAI---YRDICMWNAMMAGYGMHGCGEEALIFF 465
V V + + Y KCGD++ A +F EAI R + WN+M Y + G +A +
Sbjct: 186 VQVTVANTWISTYGKCGDLDSAKLVF-EAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLY 244
Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
M R KP+ TFI L +C + +T+G+ + +H LG IE + + +
Sbjct: 245 CLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIH-LGTDQDIEAINTFISMYSK 303
Query: 526 A 526
+
Sbjct: 304 S 304
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 216/601 (35%), Positives = 325/601 (54%), Gaps = 47/601 (7%)
Query: 76 TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMY-SECGSLVSARY-LFDEMP 133
+IL C T K++H +I G+ + L + S G VS Y LF ++P
Sbjct: 39 SILGVCKT---TDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIP 95
Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRP-SEVAMISMVSLFADVADVDLGK 192
DVV W+ MI+G+ + E + + M + P S + L D + GK
Sbjct: 96 EPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGK 155
Query: 193 AIHACVVRNCKDEKLGVA----IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
+H VV K G+ + AL+ MYS CG + A+ +F+R + V SW +MIS
Sbjct: 156 KLHCHVV------KFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMIS 209
Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
GY R E E + L EM V P+ +T+L ++ C V L K +H Y+ E
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 309 SLAMANALVDMYGKCRE-------------------------------IRSARTLFDGMK 337
SL + NALV+ Y C E ++ ART FD M
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
+D + W +I Y +A C +++ E+F M+ + + P+E TMV +L+ C G+LE+G+W
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389
Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
+ TYI+K ++ DV++ AL+DMY KCG A ++F + RD W AM+ G +G
Sbjct: 390 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449
Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
G+EA+ F M+ ++P+ IT++G+L+AC+H+G+V + + F KM + P + HYG
Sbjct: 450 GQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYG 509
Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
CMVD+LGRAGL+ EA+E+++ MP+ PN IVWGALL AS+LH + M E+AA +ILE+EP
Sbjct: 510 CMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPD 569
Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVNWK 637
N L+ NIYA RW D+ VRR + ++ +KK PGFS +EVNG H+F+ G + +
Sbjct: 570 NGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQ 629
Query: 638 S 638
S
Sbjct: 630 S 630
Score = 215 bits (548), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 223/451 (49%), Gaps = 36/451 (7%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVL-MTHLGKEIHGFA 97
+N+++ + K + + +Y M K G D+ T P +L + GK++H
Sbjct: 102 WNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHV 161
Query: 98 IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
+K GL + YV NAL++MYS CG + AR +FD DV SW+ MI GY+R EE++
Sbjct: 162 VKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESI 221
Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
E++ EM + P+ V ++ ++S + V D DL K +H V CK E + + AL++
Sbjct: 222 ELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE-YVSECKTEP-SLRLENALVN 279
Query: 218 MYSKC-------------------------------GNLAYAKQLFNRLNQNSVVSWTVM 246
Y+ C GNL A+ F+++ +SWT+M
Sbjct: 280 AYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIM 339
Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
I GY+R NE + +F EM + P E T++S++ C +G L++G+W+ YI +N
Sbjct: 340 IDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKI 399
Query: 307 EFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIH 366
+ + + NAL+DMY KC A+ +F M +D W A++ A +A ++F
Sbjct: 400 KNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQ 459
Query: 367 MKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
M+ ++P+++T +G+LS C +G ++ K+ +E ++ +VDM + G
Sbjct: 460 MQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAG 519
Query: 426 DVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
V AY + + + + +W A++ +H
Sbjct: 520 LVKEAYEILRKMPMNPNSIVWGALLGASRLH 550
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 221/650 (34%), Positives = 341/650 (52%), Gaps = 34/650 (5%)
Query: 9 NLEQTRQCHAHIIKTHFKFSYTNIINP--------------------------LTRYNSL 42
+L Q R+ H HI+ ++ K Y I+N L Y S+
Sbjct: 82 SLAQGRKIHDHILNSNCK--YDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSV 139
Query: 43 VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGL 102
+T Y +N + + A+ +Y M + D F +I+KACA LGK++H IK
Sbjct: 140 ITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLES 199
Query: 103 DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMRE 162
NALI MY + A +F +P +D++SWS++I G+ + G EAL ++E
Sbjct: 200 SSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKE 259
Query: 163 M-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA-TALIDMYS 220
M F P+E S + + + D G IH + K E G AIA +L DMY+
Sbjct: 260 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCI---KSELAGNAIAGCSLCDMYA 316
Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
+CG L A+++F+++ + SW V+I+G +E V +F++M P I++ S
Sbjct: 317 RCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRS 376
Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK- 339
L+ L G +H+YI++ GF L + N+L+ MY C ++ LF+ ++
Sbjct: 377 LLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNA 436
Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLH 399
D + WN +++A Q + LF M VS+ P+ +TM LL C E +L++G +H
Sbjct: 437 DSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVH 496
Query: 400 TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
Y K GL + +K L+DMYAKCG + A R+F RD+ W+ ++ GY G GE
Sbjct: 497 CYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGE 556
Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
EALI F +M+ +G++PN +TF+G+L ACSH GLV EG ++ M G+ P EH C+
Sbjct: 557 EALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCV 616
Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNY 579
VDLL RAG L+EA I M L P+++VW LL+A K N + + AA IL+I+P N
Sbjct: 617 VDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNS 676
Query: 580 GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
+VL+ +++A + W + A +R MK+ VKK PG S +E+ +H F
Sbjct: 677 TAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFF 726
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/518 (27%), Positives = 251/518 (48%), Gaps = 11/518 (2%)
Query: 40 NSLVTSYIKNNKPSSALNIYAFMRKNGS-EVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
N + S K+N AL + F +KN S ++ T +++ AC+ G++IH +
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
+ D ++N ++ MY +CGSL AR +FD MP R++VS++++I GY + G EA+
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
+ +M D+ P + A S++ A +DV LGK +HA V++ + + ALI M
Sbjct: 155 LYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIK--LESSSHLIAQNALIAM 212
Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF-PSEIT 277
Y + ++ A ++F + ++SW+ +I+G+ + E + EM+ VF P+E
Sbjct: 213 YVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYI 272
Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
S + C + G +H +++ + +L DMY +C + SAR +FD ++
Sbjct: 273 FGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE 332
Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
D WN +I+ A D+A +F M+ S P+ +++ LL T+ AL G
Sbjct: 333 RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQ 392
Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR---DICMWNAMMAGYGM 454
+H+YI K G D+ + +L+ MY C D+ + LF + +R D WN ++
Sbjct: 393 IHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFED--FRNNADSVSWNTILTACLQ 450
Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
H E L F M S +P+ IT LL C + G V + GL P+
Sbjct: 451 HEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLK-TGLAPEQF 509
Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
++D+ + G L +A + SM R +++ W L+
Sbjct: 510 IKNGLIDMYAKCGSLGQARRIFDSMDNR-DVVSWSTLI 546
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 214/459 (46%), Gaps = 22/459 (4%)
Query: 108 VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD 167
VSN+ I S S + L ++ N S ++R L EA + ++
Sbjct: 13 VSNSQILATSSVVSTIKTEELMNDHIN------SLCKSNFYREAL--EAFDFAQKNSSFK 64
Query: 168 IRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALIDMYSKCGNLA 226
IR IS++ + + G+ IH ++ NCK + + + ++ MY KCG+L
Sbjct: 65 IRLR--TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTI---LNNHILSMYGKCGSLR 119
Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
A+++F+ + + ++VS+T +I+GY + + E +RL+ +M++E++ P + S+I C
Sbjct: 120 DAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACA 179
Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
+ LGK LHA +++ L NAL+ MY + ++ A +F G+ KD++ W++
Sbjct: 180 SSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSS 239
Query: 347 VISAYAQAHCIDKAFELFIHMK----VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYI 402
+I+ ++Q + FE H+K PNE L C+ + G +H
Sbjct: 240 IIAGFSQ---LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLC 296
Query: 403 EKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEAL 462
K L + I +L DMYA+CG +N A R+F + D WN ++AG +G +EA+
Sbjct: 297 IKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAV 356
Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDL 522
F M SG P+ I+ LL A + +++G + ++ G + + ++ +
Sbjct: 357 SVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK-WGFLADLTVCNSLLTM 415
Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNP 561
L + + + + W +L A H+ P
Sbjct: 416 YTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQP 454
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/630 (32%), Positives = 345/630 (54%), Gaps = 18/630 (2%)
Query: 21 IKTHFKFSYTNIINPLTRYNSL-VTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILK 79
+K F N+ + + N++ + + + +Y+ + + G E++ + LK
Sbjct: 95 VKAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLK 154
Query: 80 ACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVS 139
+ + +H +K G D +A+V ALI YS CGS+ SAR +F+ + +D+V
Sbjct: 155 LFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVV 214
Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
W+ ++ Y G E++L+++ MR P+ + + + D K +H ++
Sbjct: 215 WAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQIL 274
Query: 200 RNCK--DEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN 257
+ C D ++GV L+ +Y++ G+++ A ++FN + +N VV W+ MI+ + + N
Sbjct: 275 KTCYVLDPRVGVG----LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCN 330
Query: 258 EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALV 317
E V LF M E V P+E T+ S++ C LG+ LH +++ GF+ + ++NAL+
Sbjct: 331 EAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALI 390
Query: 318 DMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEV 377
D+Y KC ++ +A LF + SK+ + WN VI Y KAF +F ++V EV
Sbjct: 391 DVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEV 450
Query: 378 TMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
T L C ++++G +H K V + +L+DMYAKCGD+ A +F+E
Sbjct: 451 TFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM 510
Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
D+ WNA+++GY HG G +AL M+ KPNG+TF+G+L+ CS+AGL+ +G+
Sbjct: 511 ETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQ 570
Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
F+ M+ G+ P +EHY CMV LLGR+G LD+A ++I+ +P P++++W A+L+AS
Sbjct: 571 ECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMN 630
Query: 558 HKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFS 617
N +A +IL+I P++ VL+SN+YA A +W +VA +R+ MKE+ VKKEPG S
Sbjct: 631 QNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLS 690
Query: 618 SVEVNGLVHKFIRG-----------GMVNW 636
+E G VH F G GM+ W
Sbjct: 691 WIEHQGDVHYFSVGLSDHPDMKLINGMLEW 720
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 228/494 (46%), Gaps = 16/494 (3%)
Query: 69 VDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYL 128
+D+ +L+ C Q K IH +K G D + +N L+ Y + G A L
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 129 FDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADV 188
FDEMP R+ VS+ T+ +GY + RE ++ P S + LF +
Sbjct: 107 FDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGH--ELNPH--VFTSFLKLFVSLDKA 162
Query: 189 DLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
++ +H+ +V+ D + ALI+ YS CG++ A+ +F + +V W ++S
Sbjct: 163 EICPWLHSPIVKLGYDSN--AFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVS 220
Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
Y+ + ++L + M P+ T + + +G K +H IL+ +
Sbjct: 221 CYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVL 280
Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
+ L+ +Y + ++ A +F+ M DV+ W+ +I+ + Q ++A +LFI M+
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMR 340
Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
+ V PNE T+ +L+ C +G+ LH + K G ++D+ + AL+D+YAKC ++
Sbjct: 341 EAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMD 400
Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
A +LF+E ++ WN ++ GY G G +A F + R+ V +TF L AC+
Sbjct: 401 TAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACA 460
Query: 489 HAGLVTEGKSVFDKMVHGLGL----VPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
+ G VHGL + K+ ++D+ + G + A + M +
Sbjct: 461 SLASMDLGVQ-----VHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEME-TID 514
Query: 545 MIVWGALLAASKLH 558
+ W AL++ H
Sbjct: 515 VASWNALISGYSTH 528
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/616 (34%), Positives = 343/616 (55%), Gaps = 5/616 (0%)
Query: 16 CHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTI 74
C H H F +I + + +NSL++ Y KN+ L ++ + V D+FT
Sbjct: 52 CKDHCSARHV-FENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTF 110
Query: 75 PTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPN 134
P ++KA + LG+ IH +K+G D V+++L+ MY++ ++ +FDEMP
Sbjct: 111 PNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPE 170
Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAI 194
RDV SW+T+I +++ G E+ALE+ M P+ V++ +S + + ++ GK I
Sbjct: 171 RDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEI 230
Query: 195 HACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
H V+ K +L + +AL+DMY KC L A+++F ++ + S+V+W MI GY+
Sbjct: 231 HRKCVK--KGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKG 288
Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
+ V + MI E PS+ T+ S+++ C L GK++H Y++R+ + +
Sbjct: 289 DSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNC 348
Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
+L+D+Y KC E A T+F + WN +IS+Y KA E++ M V+P
Sbjct: 349 SLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKP 408
Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
+ VT +L C++ ALE GK +H I + LE D +L +AL+DMY+KCG+ A+R+F
Sbjct: 409 DVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIF 468
Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
+ +D+ W M++ YG HG EAL F +M++ G+KP+G+T + +L+AC HAGL+
Sbjct: 469 NSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLID 528
Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMP-LRPNMIVWGALLA 553
EG F +M G+ P IEHY CM+D+LGRAG L EA+E+I+ P N + L +
Sbjct: 529 EGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFS 588
Query: 554 ASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKE 613
A LH S+G+ A ++E P + +++ N+YA W+ VR MKE+ ++K+
Sbjct: 589 ACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKK 648
Query: 614 PGFSSVEVNGLVHKFI 629
PG S +E++ V F
Sbjct: 649 PGCSWIEMSDKVCHFF 664
Score = 126 bits (317), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 142/279 (50%), Gaps = 7/279 (2%)
Query: 278 ILSLIIEC-GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
+LSL+ EC L+ K +H IL G + + +L+++Y C++ SAR +F+
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENF 65
Query: 337 KSK-DVMIWNAVISAYAQAHCIDKAFELFIH-MKVSKVRPNEVTMVGLLSLCTEAGALEM 394
+ DV IWN+++S Y++ E+F + S P+ T ++ G +
Sbjct: 66 DIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFL 125
Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
G+ +HT + K G DV++ ++LV MYAK + ++F E RD+ WN +++ +
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV-HGLGLVPKI 513
G E+AL F ME SG +PN ++ ++ACS + GK + K V G L +
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV 245
Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
+VD+ G+ L+ A E+ + MP R +++ W +++
Sbjct: 246 N--SALVDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMI 281
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/593 (33%), Positives = 329/593 (55%), Gaps = 2/593 (0%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
YN+L+ + A+ ++ M +G E D+ T+ +++ AC+ G+++H +
Sbjct: 357 YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTT 416
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
K G + + AL+ +Y++C + +A F E +VV W+ M+ Y +
Sbjct: 417 KLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFR 476
Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
+ R+M+ +I P++ S++ + D++LG+ IH+ +++ + +L + + LIDM
Sbjct: 477 IFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT--NFQLNAYVCSVLIDM 534
Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
Y+K G L A + R VVSWT MI+GY + N ++ + F +M++ + E+ +
Sbjct: 535 YAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGL 594
Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
+ + C + L+ G+ +HA +GF L NALV +Y +C +I + F+ ++
Sbjct: 595 TNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEA 654
Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
D + WNA++S + Q+ ++A +F+ M + N T + +E ++ GK +
Sbjct: 655 GDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV 714
Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
H I K G + + + AL+ MYAKCG ++ A + F E ++ WNA++ Y HG G
Sbjct: 715 HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFG 774
Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
EAL F M S V+PN +T +G+L+ACSH GLV +G + F+ M GL PK EHY C
Sbjct: 775 SEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVC 834
Query: 519 MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQN 578
+VD+L RAGLL A E I+ MP++P+ +VW LL+A +HKN +GE AA +LE+EP++
Sbjct: 835 VVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPED 894
Query: 579 YGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
VL+SN+YAV+ +W+ R+ MKE VKKEPG S +EV +H F G
Sbjct: 895 SATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVG 947
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 135/527 (25%), Positives = 255/527 (48%), Gaps = 13/527 (2%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKAC-AQVLMTHLGKEIHGFA 97
+N ++ N ++ M + T +L+AC + + ++IH
Sbjct: 154 WNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARI 213
Query: 98 IKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
+ GL V N LI +YS G + AR +FD + +D SW MI G + EA+
Sbjct: 214 LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAI 273
Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA----IAT 213
+ +M + I P+ A S++S + +++G+ +H V+ KLG + +
Sbjct: 274 RLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVL------KLGFSSDTYVCN 327
Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
AL+ +Y GNL A+ +F+ ++Q V++ +I+G +C + + LF M + + P
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
T+ SL++ C G L G+ LHAY + GF + + AL+++Y KC +I +A F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
+ ++V++WN ++ AY + +F +F M++ ++ PN+ T +L C G LE
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
+G+ +H+ I K +++ + + L+DMYAK G ++ A+ + +D+ W M+AGY
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
+ ++AL F M G++ + + ++AC+ + EG+ + + G +
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSDL 626
Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
+V L R G ++E++ + N I W AL++ + N
Sbjct: 627 PFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNALVSGFQQSGN 672
Score = 199 bits (505), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 223/458 (48%), Gaps = 12/458 (2%)
Query: 2 KIKNGFLNLEQTRQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAF 61
KI+ LNL +C I+T + + + +N ++ +Y + ++ I+
Sbjct: 425 KIEGALLNL--YAKCAD--IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQ 480
Query: 62 MRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGS 121
M+ + +T P+ILK C ++ LG++IH IK +AYV + LI MY++ G
Sbjct: 481 MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGK 540
Query: 122 LVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSL 181
L +A + +DVVSW+TMI GY + ++AL R+M IR EV + + VS
Sbjct: 541 LDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 600
Query: 182 FADVADVDLGKAIH--ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNS 239
A + + G+ IH ACV D + AL+ +YS+CG + + F +
Sbjct: 601 CAGLQALKEGQQIHAQACVSGFSSD----LPFQNALVTLYSRCGKIEESYLAFEQTEAGD 656
Query: 240 VVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHA 299
++W ++SG+ + E +R+F M E + + T S + ++ GK +HA
Sbjct: 657 NIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHA 716
Query: 300 YILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDK 359
I + G++ + NAL+ MY KC I A F + +K+ + WNA+I+AY++ +
Sbjct: 717 VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSE 776
Query: 360 AFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KWLHTYIEKQGLEVDVILKTALV 418
A + F M S VRPN VT+VG+LS C+ G ++ G + + + GL +V
Sbjct: 777 ALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVV 836
Query: 419 DMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGMH 455
DM + G ++ A E I D +W +++ +H
Sbjct: 837 DMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVH 874
Score = 198 bits (504), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 226/469 (48%), Gaps = 11/469 (2%)
Query: 90 GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
G+++H +K GLD + +S L Y G L A +FDEMP R + +W+ MI+
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELAS 163
Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMV-SLFADVADVDLGKAIHACVV-RNCKDEKL 207
L E + M ++ P+E ++ + D+ + IHA ++ + +D
Sbjct: 164 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD--- 220
Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
+ LID+YS+ G + A+++F+ L SW MISG + E +RLF +M
Sbjct: 221 STVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMY 280
Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
+ P+ S++ C + L++G+ LH +L+ GF + NALV +Y +
Sbjct: 281 VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLI 340
Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
SA +F M +D + +N +I+ +Q +KA ELF M + + P+ T+ L+ C+
Sbjct: 341 SAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACS 400
Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
G L G+ LH Y K G + ++ AL+++YAKC D+ A F E ++ +WN
Sbjct: 401 ADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 460
Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
M+ YG+ + F M+ + PN T+ +L C G + G+ + +++
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK-- 518
Query: 508 GLVPKIEHYGC--MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
++ Y C ++D+ + G LD A +++ + +++ W ++A
Sbjct: 519 -TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGK-DVVSWTTMIAG 565
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 118/255 (46%), Gaps = 2/255 (0%)
Query: 289 GGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVI 348
G L G+ LH+ IL+ G + + ++ L D Y ++ A +FD M + + WN +I
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMI 158
Query: 349 SAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG-ALEMGKWLHTYIEKQGL 407
A + I + F LF+ M V PNE T G+L C A ++ + +H I QGL
Sbjct: 159 KELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGL 218
Query: 408 EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD 467
++ L+D+Y++ G V+ A R+F +D W AM++G + C EA+ F D
Sbjct: 219 RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 468 MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAG 527
M G+ P F +L+AC + G+ + +V LG +V L G
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG-LVLKLGFSSDTYVCNALVSLYFHLG 337
Query: 528 LLDEAHEMIKSMPLR 542
L A + +M R
Sbjct: 338 NLISAEHIFSNMSQR 352
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 129/286 (45%), Gaps = 15/286 (5%)
Query: 308 FSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFE--LFI 365
F +++++ + ++G R++++ RT+F + + A IS Y D++F+
Sbjct: 19 FLRSVSSSFIFIHGVPRKLKT-RTVFPTLCGTRRASF-AAISVYISE---DESFQEKRID 73
Query: 366 HMKVSKVRPNEVTMVGLLSLCTEA-GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKC 424
++ +RPN T+ LL C + G+L+ G+ LH+ I K GL+ + L L D Y
Sbjct: 74 SVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK 133
Query: 425 GDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLL 484
GD+ GA+++F E R I WN M+ E FV M V PN TF G+L
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 485 NACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPN 544
AC + + + GL ++DL R G +D A + + L+ +
Sbjct: 194 EACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDH 253
Query: 545 MIVWGALLAASKLHKNPSMGE----IAATQILEIEPQNYGYNVLMS 586
W A++ S L KN E +L I P Y ++ ++S
Sbjct: 254 S-SWVAMI--SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLS 296
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/599 (34%), Positives = 342/599 (57%), Gaps = 3/599 (0%)
Query: 33 INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
+ L +NSL++ Y + AL IY ++ + D+FT+ ++L A +L+ G+
Sbjct: 169 VRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQG 228
Query: 93 IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
+HGFA+K+G++ V+N L+ MY + AR +FDEM RD VS++TMI GY + +
Sbjct: 229 LHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEM 288
Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
EE++ + E +P + + S++ + D+ L K I+ +++ L +
Sbjct: 289 VEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK--AGFVLESTVR 345
Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
LID+Y+KCG++ A+ +FN + VSW +ISGYI+ ++ E ++LF M+
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
IT L LI + L+ GK LH+ +++G L+++NAL+DMY KC E+ + +
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKI 465
Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
F M + D + WN VISA + ++ M+ S+V P+ T + L +C A
Sbjct: 466 FSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK 525
Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
+GK +H + + G E ++ + AL++MY+KCG + + R+F RD+ W M+ Y
Sbjct: 526 RLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAY 585
Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
GM+G GE+AL F DME+SG+ P+ + FI ++ ACSH+GLV EG + F+KM + P
Sbjct: 586 GMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPM 645
Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
IEHY C+VDLL R+ + +A E I++MP++P+ +W ++L A + + E + +I+
Sbjct: 646 IEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRII 705
Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
E+ P + GY++L SN YA +W+ V+ +R+ +K+ + K PG+S +EV VH F G
Sbjct: 706 ELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSG 764
Score = 274 bits (701), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/592 (28%), Positives = 306/592 (51%), Gaps = 33/592 (5%)
Query: 9 NLEQTRQCHAHIIK-----------------THFKFSYTNI-----INPLTR---YNSLV 43
NL + R+ HA +I +HF+ +++ ++P +NS++
Sbjct: 19 NLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSII 78
Query: 44 TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD 103
++ KN AL Y +R++ D +T P+++KACA + +G ++ + G +
Sbjct: 79 RAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFE 138
Query: 104 GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
D +V NAL+ MYS G L AR +FDEMP RD+VSW+++I GY G EEALE+ E+
Sbjct: 139 SDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 164 RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCG 223
+ I P + S++ F ++ V G+ +H ++ V + L+ MY K
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALK--SGVNSVVVVNNGLVAMYLKFR 256
Query: 224 NLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLII 283
A+++F+ ++ VS+ MI GY++ + E VR+F E +++ P +T+ S++
Sbjct: 257 RPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSVLR 315
Query: 284 ECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMI 343
CG + L L K+++ Y+L+ GF + N L+D+Y KC ++ +AR +F+ M+ KD +
Sbjct: 316 ACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS 375
Query: 344 WNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
WN++IS Y Q+ + +A +LF M + + + + +T + L+S+ T L+ GK LH+
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI 435
Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
K G+ +D+ + AL+DMYAKCG+V + ++FS D WN +++ G L
Sbjct: 436 KSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQ 495
Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLL 523
M +S V P+ TF+ L C+ GK + ++ G +++ ++++
Sbjct: 496 VTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR-FGYESELQIGNALIEMY 554
Query: 524 GRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
+ G L+ + + + M R +++ W ++ A ++ GE A ++E
Sbjct: 555 SKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE---GEKALETFADME 602
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/593 (34%), Positives = 345/593 (58%), Gaps = 8/593 (1%)
Query: 40 NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
N ++ Y+ + + S+ L +A M ++ E D T +L +V LG+++H A+K
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
GLD VSN+LI MY + AR +FD M RD++SW+++I G + GL EA+ +
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 160 MREMRFMDIRPSEVAMISMVSLFADVAD-VDLGKAIH--ACVVRNCKDEKLGVAIATALI 216
++ ++P + M S++ + + + + L K +H A + N D ++TALI
Sbjct: 404 FMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS----FVSTALI 459
Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
D YS+ + A+ LF R N + +V+W M++GY + ++ ++ ++LFA M ++ +
Sbjct: 460 DAYSRNRCMKEAEILFERHNFD-LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDF 518
Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
T+ ++ CGF+ + GK +HAY +++G++ L +++ ++DMY KC ++ +A+ FD +
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578
Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
D + W +IS + ++AF +F M++ V P+E T+ L + ALE G+
Sbjct: 579 PVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR 638
Query: 397 WLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
+H K D + T+LVDMYAKCG ++ AY LF +I WNAM+ G HG
Sbjct: 639 QIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHG 698
Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
G+E L F M+ G+KP+ +TFIG+L+ACSH+GLV+E M G+ P+IEHY
Sbjct: 699 EGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHY 758
Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
C+ D LGRAGL+ +A +I+SM + + ++ LLAA ++ + G+ AT++LE+EP
Sbjct: 759 SCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEP 818
Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
+ VL+SN+YA A++W+++ R +MK +VKK+PGFS +EV +H F+
Sbjct: 819 LDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFV 871
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/528 (25%), Positives = 243/528 (46%), Gaps = 51/528 (9%)
Query: 36 LTRYNSLVTSYIKNNKP-----SSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLG 90
L +NS++ +Y ++++ A ++ +R++ T+ +LK C
Sbjct: 105 LVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWAS 164
Query: 91 KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
+ HG+A K GLDGD +V+ AL+ +Y + G + + LF+EMP RDVV W+ M++ Y
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM 224
Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA 210
G EEA+++ + P+E+ + + + D D D G+
Sbjct: 225 GFKEEAIDLSSAFHSSGLNPNEITLRLLARISGD--DSDAGQV----------------- 265
Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM----ISGYIRCNEINEGVRLFAEM 266
+ F N S VS + +S Y+ + + ++ FA+M
Sbjct: 266 -------------------KSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADM 306
Query: 267 IEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREI 326
+E +V ++T + ++ V L LG+ +H L+ G + L ++N+L++MY K R+
Sbjct: 307 VESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKF 366
Query: 327 RSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLC 386
ART+FD M +D++ WN+VI+ AQ +A LF+ + ++P++ TM +L
Sbjct: 367 GFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAA 426
Query: 387 TE-AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
+ L + K +H + K D + TAL+D Y++ + A LF + D+ W
Sbjct: 427 SSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAW 485
Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
NAMMAGY G + L F M + G + + T + C + +GK V +
Sbjct: 486 NAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIK 545
Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
G + ++D+ + G + A S+P+ P+ + W +++
Sbjct: 546 S-GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMIS 591
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 177/353 (50%), Gaps = 30/353 (8%)
Query: 10 LEQTRQCHAHIIKTH---FKFSYTNIINPLTR--------------------YNSLVTSY 46
L ++Q H H IK + F T +I+ +R +N+++ Y
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGY 492
Query: 47 IKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDA 106
+++ L ++A M K G D+FT+ T+ K C + + GK++H +AIK+G D D
Sbjct: 493 TQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDL 552
Query: 107 YVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFM 166
+VS+ ++ MY +CG + +A++ FD +P D V+W+TMI G G E A V +MR M
Sbjct: 553 WVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLM 612
Query: 167 DIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NCKDEKLGVAIATALIDMYSKCGNL 225
+ P E + ++ + + ++ G+ IHA ++ NC ++ + T+L+DMY+KCG++
Sbjct: 613 GVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPF---VGTSLVDMYAKCGSI 669
Query: 226 AYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC 285
A LF R+ ++ +W M+ G + E E ++LF +M + P ++T + ++ C
Sbjct: 670 DDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSAC 729
Query: 286 GFVGGLQLGKWLHAYILRN--GFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
GL + H + G + + + L D G+ ++ A L + M
Sbjct: 730 SH-SGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESM 781
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 217/442 (49%), Gaps = 10/442 (2%)
Query: 25 FKFSYTNIIN----PLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKA 80
F F+ T N L +NS++ +N A+ ++ + + G + D +T+ ++LKA
Sbjct: 366 FGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Query: 81 CAQVLM-THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVS 139
+ + L K++H AIK D++VS ALI YS + A LF E N D+V+
Sbjct: 426 ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVA 484
Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
W+ M+ GY + + L++ M R + + ++ + ++ GK +HA +
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI 544
Query: 200 RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
++ D L + +++ ++DMY KCG+++ A+ F+ + V+WT MISG I E
Sbjct: 545 KSGYD--LDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERA 602
Query: 260 VRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM 319
+F++M V P E TI +L + L+ G+ +HA L+ + +LVDM
Sbjct: 603 FHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDM 662
Query: 320 YGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTM 379
Y KC I A LF ++ ++ WNA++ AQ + +LF MK ++P++VT
Sbjct: 663 YAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTF 722
Query: 380 VGLLSLCTEAGAL-EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEA 437
+G+LS C+ +G + E K + + G++ ++ + L D + G V A L S +
Sbjct: 723 IGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMS 782
Query: 438 IYRDICMWNAMMAGYGMHGCGE 459
+ M+ ++A + G E
Sbjct: 783 MEASASMYRTLLAACRVQGDTE 804
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 211/475 (44%), Gaps = 51/475 (10%)
Query: 89 LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
LGK H + + + ++ N LI MYS+CGSL AR +FD+MP+RD+VSW++++ Y
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 149 RGGLP-----EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH--ACVVRN 201
+ ++A + R +R + S + + M+ L V ++ H AC +
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL 176
Query: 202 CKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVR 261
DE +A AL+++Y K G + K LF + VV W +M+ Y+ E +
Sbjct: 177 DGDE----FVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAID 232
Query: 262 LFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYG 321
L + + P+EIT L+L + G S A N
Sbjct: 233 LSSAFHSSGLNPNEIT-------------LRLLARISGDDSDAGQVKSFANGN------- 272
Query: 322 KCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVG 381
D +++ N +S Y + + F M S V ++VT +
Sbjct: 273 ------------DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFIL 320
Query: 382 LLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRD 441
+L+ + +L +G+ +H K GL++ + + +L++MY K A +F RD
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERD 380
Query: 442 ICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFD 501
+ WN+++AG +G EA+ F+ + R G+KP+ T +L A S + EG S+
Sbjct: 381 LISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSLSK 437
Query: 502 KM-VHGLGLVPKIEHY--GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA 553
++ VH + + + + ++D R + EA + + +++ W A++A
Sbjct: 438 QVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF--DLVAWNAMMA 490
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/581 (34%), Positives = 321/581 (55%), Gaps = 6/581 (1%)
Query: 42 LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
++ Y N + + +Y + K+G D+ LKAC ++ GK+IH +K
Sbjct: 113 MLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP 172
Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
D V L+ MY++CG + SA +F+++ R+VV W++MI GY + L EE L +
Sbjct: 173 -SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFN 231
Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
MR ++ +E +++ ++ + GK H C+V++ +L + T+L+DMY K
Sbjct: 232 RMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKS--GIELSSCLVTSLLDMYVK 289
Query: 222 CGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSL 281
CG+++ A+++FN + +V WT MI GY +NE + LF +M + P+ +TI S+
Sbjct: 290 CGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASV 349
Query: 282 IIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDV 341
+ CG + L+LG+ +H ++ G + +ANALV MY KC + R A+ +F+ KD+
Sbjct: 350 LSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDI 408
Query: 342 MIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTY 401
+ WN++IS ++Q I +A LF M V PN VT+ L S C G+L +G LH Y
Sbjct: 409 VAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAY 468
Query: 402 IEKQGL--EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGE 459
K G V + TAL+D YAKCGD A +F ++ W+AM+ GYG G
Sbjct: 469 SVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTI 528
Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
+L F +M + KPN TF +L+AC H G+V EGK F M P +HY CM
Sbjct: 529 GSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCM 588
Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNY 579
VD+L RAG L++A ++I+ MP++P++ +GA L +H +GEI ++L++ P +
Sbjct: 589 VDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDA 648
Query: 580 GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVE 620
Y VL+SN+YA RWN VR +MK+ + K G S++E
Sbjct: 649 SYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 249 bits (636), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 150/468 (32%), Positives = 239/468 (51%), Gaps = 12/468 (2%)
Query: 91 KEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
++ HG NGL GD ++ L+ +Y G AR +FD++P D W M+R Y
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCY--- 117
Query: 151 GLPEEALEVMREMRFM---DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
L +E++EV++ + R ++ + ++ D+D GK IH +V K
Sbjct: 118 CLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLV---KVPSF 174
Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
+ T L+DMY+KCG + A ++FN + +VV WT MI+GY++ + EG+ LF M
Sbjct: 175 DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR 234
Query: 268 EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIR 327
E NV +E T +LI+ C + L GKW H ++++G E S + +L+DMY KC +I
Sbjct: 235 ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDIS 294
Query: 328 SARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCT 387
+AR +F+ D+++W A+I Y +++A LF MK +++PN VT+ +LS C
Sbjct: 295 NARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCG 354
Query: 388 EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNA 447
LE+G+ +H K G+ D + ALV MYAKC A +F +DI WN+
Sbjct: 355 LIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNS 413
Query: 448 MMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
+++G+ +G EAL F M V PNG+T L +AC+ G + G S+ V
Sbjct: 414 IISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLG 473
Query: 508 GLVPKIEHYG-CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
L H G ++D + G A + ++ N I W A++
Sbjct: 474 FLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE-EKNTITWSAMIGG 520
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 131/424 (30%), Positives = 233/424 (54%), Gaps = 13/424 (3%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
+ S++ Y+KN+ L ++ MR+N + +T T++ AC ++ H GK HG +
Sbjct: 210 WTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLV 269
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
K+G++ + + +L+ MY +CG + +AR +F+E + D+V W+ MI GY G EAL
Sbjct: 270 KSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALS 329
Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV---AIATAL 215
+ ++M+ ++I+P+ V + S++S + +++LG+++H + K+G+ +A AL
Sbjct: 330 LFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSI------KVGIWDTNVANAL 383
Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
+ MY+KC AK +F ++ +V+W +ISG+ + I+E + LF M E+V P+
Sbjct: 384 VHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNG 443
Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGF--EFSLAMANALVDMYGKCREIRSARTLF 333
+T+ SL C +G L +G LHAY ++ GF S+ + AL+D Y KC + +SAR +F
Sbjct: 444 VTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIF 503
Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
D ++ K+ + W+A+I Y + + ELF M + +PNE T +LS C G +
Sbjct: 504 DTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVN 563
Query: 394 MG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAG 451
G K+ + + T +VDM A+ G++ A + + I D+ + A + G
Sbjct: 564 EGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHG 623
Query: 452 YGMH 455
GMH
Sbjct: 624 CGMH 627
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 189/375 (50%), Gaps = 6/375 (1%)
Query: 36 LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
L + +++ Y N + AL+++ M+ + + TI ++L C + LG+ +HG
Sbjct: 308 LVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHG 367
Query: 96 FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
+IK G+ D V+NAL+ MY++C A+Y+F+ +D+V+W+++I G+ + G E
Sbjct: 368 LSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHE 426
Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
AL + M + P+ V + S+ S A + + +G ++HA V+ V + TAL
Sbjct: 427 ALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTAL 486
Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
+D Y+KCG+ A+ +F+ + + + ++W+ MI GY + + + LF EM+++ P+E
Sbjct: 487 LDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNE 546
Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRN-GFEFSLAMANALVDMYGKCREIRSARTLFD 334
T S++ CG G + GK + + ++ F S +VDM + E+ A + +
Sbjct: 547 STFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIE 606
Query: 335 GMK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS-LCTEAGAL 392
M DV + A + D E+ I K+ + P++ + L+S L G
Sbjct: 607 KMPIQPDVRCFGAFLHGCGMHSRFDLG-EIVIK-KMLDLHPDDASYYVLVSNLYASDGRW 664
Query: 393 EMGKWLHTYIEKQGL 407
K + ++++GL
Sbjct: 665 NQAKEVRNLMKQRGL 679
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/632 (34%), Positives = 347/632 (54%), Gaps = 47/632 (7%)
Query: 34 NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
+PLT +S SY + PSS+ Y +R + S ++L C + + I
Sbjct: 6 SPLTVPSS---SYPFHFLPSSSDPPYDSIRNHPSL-------SLLHNCKTLQSLRI---I 52
Query: 94 HGFAIKNGLDGDAYVSNALIQ---MYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRG 150
H IK GL Y + LI+ + L A +F + +++ W+TM RG+
Sbjct: 53 HAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALS 112
Query: 151 GLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVR-NC------- 202
P AL++ M + + P+ ++ A G+ IH V++ C
Sbjct: 113 SDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVH 172
Query: 203 ---------------------KDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVV 241
K V TALI Y+ G + A++LF+ + VV
Sbjct: 173 TSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVV 232
Query: 242 SWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYI 301
SW MISGY E + LF +M++ NV P E T+++++ C G ++LG+ +H +I
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 302 LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAF 361
+GF +L + NAL+D+Y KC E+ +A LF+ + KDV+ WN +I Y + +A
Sbjct: 293 DDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEAL 352
Query: 362 ELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK--QGLEVDVILKTALVD 419
LF M S PN+VTM+ +L C GA+++G+W+H YI+K +G+ L+T+L+D
Sbjct: 353 LLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLID 412
Query: 420 MYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGIT 479
MYAKCGD+ A+++F+ +++ + WNAM+ G+ MHG + + F M + G++P+ IT
Sbjct: 413 MYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDIT 472
Query: 480 FIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSM 539
F+GLL+ACSH+G++ G+ +F M + PK+EHYGCM+DLLG +GL EA EMI M
Sbjct: 473 FVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMM 532
Query: 540 PLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVA 599
+ P+ ++W +LL A K+H N +GE A +++IEP+N G VL+SNIYA A RWN+VA
Sbjct: 533 EMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVA 592
Query: 600 GVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
R ++ + +KK PG SS+E++ +VH+FI G
Sbjct: 593 KTRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 624
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 146/263 (55%)
Query: 33 INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
+ + +N++++ Y + AL ++ M K D T+ T++ ACAQ LG++
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 93 IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
+H + +G + + NALI +YS+CG L +A LF+ +P +DV+SW+T+I GY L
Sbjct: 288 VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNL 347
Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
+EAL + +EM P++V M+S++ A + +D+G+ IH + + K ++
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 407
Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
T+LIDMY+KCG++ A Q+FN + S+ SW MI G+ + LF+ M + +
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467
Query: 273 PSEITILSLIIECGFVGGLQLGK 295
P +IT + L+ C G L LG+
Sbjct: 468 PDDITFVGLLSACSHSGMLDLGR 490
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 375 bits (962), Expect = e-103, Method: Compositional matrix adjust.
Identities = 210/594 (35%), Positives = 328/594 (55%), Gaps = 49/594 (8%)
Query: 76 TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYL------F 129
++L+ C L+ HL K+I I NGL D + S+ LI C +L +RYL
Sbjct: 58 SLLEKCK--LLLHL-KQIQAQMIINGLILDPFASSRLIAF---C-ALSESRYLDYSVKIL 110
Query: 130 DEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR---FMDIRPSEVAMISMVSLFADVA 186
+ N ++ SW+ IRG+ P+E+ + ++M + RP + + AD+
Sbjct: 111 KGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLR 170
Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
LG I V++ +L + A I M++ CG++ A+++F+ +VSW +
Sbjct: 171 LSSLGHMILGHVLK--LRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCL 228
Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
I+GY + E + + ++ M E V P ++T++ L+ C +G L GK + Y+ NG
Sbjct: 229 INGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGL 288
Query: 307 EFSLAMANALVDMYGKCREIRSAR-------------------------------TLFDG 335
++ + NAL+DM+ KC +I AR LFD
Sbjct: 289 RMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDD 348
Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
M+ KDV++WNA+I QA A LF M+ S +P+E+TM+ LS C++ GAL++G
Sbjct: 349 MEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG 408
Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
W+H YIEK L ++V L T+LVDMYAKCG+++ A +F R+ + A++ G +H
Sbjct: 409 IWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALH 468
Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
G A+ +F +M +G+ P+ ITFIGLL+AC H G++ G+ F +M L P+++H
Sbjct: 469 GDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKH 528
Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
Y MVDLLGRAGLL+EA +++SMP+ + VWGALL ++H N +GE AA ++LE++
Sbjct: 529 YSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELD 588
Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
P + G VL+ +Y AN W D RR+M E V+K PG SS+EVNG+V +FI
Sbjct: 589 PSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFI 642
Score = 246 bits (627), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 145/480 (30%), Positives = 252/480 (52%), Gaps = 42/480 (8%)
Query: 32 IINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNG---SEVDNFTIPTILKACAQVLMT 87
I NP + +N + + ++ P + +Y M ++G S D+FT P + K CA + ++
Sbjct: 113 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 172
Query: 88 HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGY 147
LG I G +K L+ ++V NA I M++ CG + +AR +FDE P RD+VSW+ +I GY
Sbjct: 173 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 232
Query: 148 HRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
+ G E+A+ V + M ++P +V MI +VS + + D++ GK + V N ++
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKEN--GLRM 290
Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEIN---------- 257
+ + AL+DM+SKCG++ A+++F+ L + ++VSWT MISGY RC ++
Sbjct: 291 TIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDME 350
Query: 258 ---------------------EGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKW 296
+ + LF EM N P EIT++ + C +G L +G W
Sbjct: 351 EKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIW 410
Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
+H YI + ++A+ +LVDMY KC I A ++F G+++++ + + A+I A
Sbjct: 411 IHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGD 470
Query: 357 IDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ-GLEVDVILKT 415
A F M + + P+E+T +GLLS C G ++ G+ + ++ + L + +
Sbjct: 471 ASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYS 530
Query: 416 ALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAGYGMHG---CGEEALIFFVDMERS 471
+VD+ + G + A RL S + D +W A++ G MHG GE+A ++++ S
Sbjct: 531 IMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPS 590
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 139/282 (49%), Gaps = 10/282 (3%)
Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDM--YGKCREIRSARTLFDG 335
+LSL+ +C + L K + A ++ NG ++ L+ + R + + + G
Sbjct: 56 LLSLLEKCKLLLHL---KQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKG 112
Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHM---KVSKVRPNEVTMVGLLSLCTEAGAL 392
+++ ++ WN I ++++ ++F L+ M + RP+ T L +C +
Sbjct: 113 IENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 172
Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
+G + ++ K LE+ + A + M+A CGD+ A ++F E+ RD+ WN ++ GY
Sbjct: 173 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 232
Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
G E+A+ + ME GVKP+ +T IGL+++CS G + GK ++ V GL
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYE-YVKENGLRMT 291
Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
I ++D+ + G + EA + ++ R ++ W +++
Sbjct: 292 IPLVNALMDMFSKCGDIHEARRIFDNLEKR-TIVSWTTMISG 332
>sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protein At4g39952,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E98 PE=2
SV=2
Length = 775
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/585 (33%), Positives = 328/585 (56%), Gaps = 8/585 (1%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTI---LKACAQVLMTHLGKEIHG 95
+ ++++ +++N + L M GS+VD T+ +AC+ + G+ +HG
Sbjct: 195 WTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHG 254
Query: 96 FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
FA+KNGL +V +++ YS+ G+ A F E+ + D+ SW+++I R G EE
Sbjct: 255 FAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEE 314
Query: 156 ALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
+ ++ EM+ + P V + +++ + V GKA H V+R+C L + +L
Sbjct: 315 SFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCF--SLDSTVCNSL 372
Query: 216 IDMYSKCGNLAYAKQLFNRLNQN-SVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS 274
+ MY K L+ A++LF R+++ + +W M+ GY + + + LF ++ +
Sbjct: 373 LSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEID 432
Query: 275 EITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFD 334
+ S+I C +G + LGK LH Y+++ + ++++ N+L+D+YGK ++ A +F
Sbjct: 433 SASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFC 492
Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
+ +V+ WNA+I++Y +KA LF M +P+ +T+V LL C G+LE
Sbjct: 493 EADT-NVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLER 551
Query: 395 GKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGM 454
G+ +H YI + E+++ L AL+DMYAKCG + + LF +D WN M++GYGM
Sbjct: 552 GQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGM 611
Query: 455 HGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
HG E A+ F ME S VKP G TF+ LL+AC+HAGLV +GK +F KM H + P ++
Sbjct: 612 HGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLK 670
Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
HY C+VDLL R+G L+EA + SMP P+ ++WG LL++ H MG A + +
Sbjct: 671 HYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVAS 730
Query: 575 EPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
+PQN GY ++++N+Y+ A +W + R +M+E V K G S V
Sbjct: 731 DPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/537 (27%), Positives = 272/537 (50%), Gaps = 30/537 (5%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
+NS++ ++ N + +L + M +G D+FT P ++ ACA++L H+G +HG +
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVL 152
Query: 99 KNG-LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEAL 157
K+G D + V + + YS+CG L A +FDEMP+RDVV+W+ +I G+ + G E L
Sbjct: 153 KHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGL 212
Query: 158 EVMREMRFM--DI-RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVA---- 210
+ +M D+ +P+ + +++ + G+ +H V+N G+A
Sbjct: 213 GYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKN------GLASSKF 266
Query: 211 IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN 270
+ +++ YSK GN + A F L + SWT +I+ R ++ E +F EM +
Sbjct: 267 VQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKG 326
Query: 271 VFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSAR 330
+ P + I LI E G + + GK H +++R+ F + N+L+ MY K + A
Sbjct: 327 MHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAE 386
Query: 331 TLFDGMKSK-DVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
LF + + + WN ++ Y + C K ELF ++ + + + ++S C+
Sbjct: 387 KLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHI 446
Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
GA+ +GK LH Y+ K L++ + + +L+D+Y K GD+ A+R+F EA ++ WNAM+
Sbjct: 447 GAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEAD-TNVITWNAMI 505
Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
A Y E+A+ F M KP+ IT + LL AC + G + G +M+H
Sbjct: 506 ASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERG-----QMIH--RY 558
Query: 510 VPKIEH------YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
+ + EH ++D+ + G L+++ E+ + + + + W +++ +H +
Sbjct: 559 ITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGN-QKDAVCWNVMISGYGMHGD 614
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/525 (24%), Positives = 244/525 (46%), Gaps = 20/525 (3%)
Query: 51 KPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSN 110
KP+ + + + S VD I IL C Q L ++ + I GL + +V++
Sbjct: 7 KPNLVVTLRKLSSSSASYVDRH-ISVIL--CDQSLSLESLRKHNALIITGGLSENIFVAS 63
Query: 111 ALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRP 170
LI Y+ G + +F + RD+ W+++I+ + G +L M P
Sbjct: 64 KLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSP 123
Query: 171 SEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQ 230
+VS A++ +G +H V+++ ++ A+ + + YSKCG L A
Sbjct: 124 DHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDR-NTAVGASFVYFYSKCGFLQDACL 182
Query: 231 LFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGF--- 287
+F+ + VV+WT +ISG+++ E G+ +M + +L ECGF
Sbjct: 183 VFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTL--ECGFQAC 240
Query: 288 --VGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
+G L+ G+ LH + ++NG S + +++ Y K A F + +D+ W
Sbjct: 241 SNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWT 300
Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
++I++ A++ ++++F++F M+ + P+ V + L++ + + GK H ++ +
Sbjct: 301 SIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRH 360
Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLF---SEAIYRDICMWNAMMAGYGMHGCGEEAL 462
+D + +L+ MY K ++ A +LF SE ++ WN M+ GYG C + +
Sbjct: 361 CFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEA--WNTMLKGYGKMKCHVKCI 418
Query: 463 IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDL 522
F ++ G++ + + ++++CSH G V GKS+ +V L I ++DL
Sbjct: 419 ELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVK-TSLDLTISVVNSLIDL 477
Query: 523 LGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
G+ G L A M N+I W A++ AS +H S IA
Sbjct: 478 YGKMGDLTVAWRMF--CEADTNVITWNAMI-ASYVHCEQSEKAIA 519
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/603 (32%), Positives = 347/603 (57%), Gaps = 9/603 (1%)
Query: 36 LTRYNSLVTSYIKNN-KPSSALNIYAFMRKNGSEV---DNFTIPTILKACAQVLMTHLGK 91
L +NS++ + N S L + M +NG D T+ T+L CA+ LGK
Sbjct: 253 LVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 312
Query: 92 EIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
+HG+A+K LD + ++NAL+ MYS+CG + +A+ +F N++VVSW+TM+ G+ G
Sbjct: 313 GVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG 372
Query: 152 LPEEALEVMREMRF--MDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
+V+R+M D++ EV +++ V + + + K +H ++ ++
Sbjct: 373 DTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLK--QEFVYNE 430
Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
+A A + Y+KCG+L+YA+++F+ + +V SW +I G+ + N+ + +M
Sbjct: 431 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 490
Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
+ P T+ SL+ C + L+LGK +H +I+RN E L + +++ +Y C E+ +
Sbjct: 491 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 550
Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
+ LFD M+ K ++ WN VI+ Y Q D+A +F M + ++ ++M+ + C+
Sbjct: 551 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLL 610
Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
+L +G+ H Y K LE D + +L+DMYAK G + + ++F+ + WNAM+
Sbjct: 611 PSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMI 670
Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGL 509
GYG+HG +EA+ F +M+R+G P+ +TF+G+L AC+H+GL+ EG D+M GL
Sbjct: 671 MGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGL 730
Query: 510 VPKIEHYGCMVDLLGRAGLLDEAHEMI-KSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
P ++HY C++D+LGRAG LD+A ++ + M ++ +W +LL++ ++H+N MGE A
Sbjct: 731 KPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVA 790
Query: 569 TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
++ E+EP+ VL+SN+YA +W DV VR+ M E+ ++K+ G S +E+N V F
Sbjct: 791 AKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSF 850
Query: 629 IRG 631
+ G
Sbjct: 851 VVG 853
Score = 246 bits (627), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 146/463 (31%), Positives = 248/463 (53%), Gaps = 15/463 (3%)
Query: 36 LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTHLGKEIH 94
L ++N++++SY +N L + M + D+FT P ++KACA + +G +H
Sbjct: 151 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 210
Query: 95 GFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPE 154
G +K GL D +V NAL+ Y G + A LFD MP R++VSW++MIR + G E
Sbjct: 211 GLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSE 270
Query: 155 EALEVMREM-------RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKL 207
E+ ++ EM FM P +++++ + A ++ LGK +H V+ D++L
Sbjct: 271 ESFLLLGEMMEENGDGAFM---PDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327
Query: 208 GVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMI 267
+ AL+DMYSKCG + A+ +F N +VVSW M+ G+ + + + +M+
Sbjct: 328 --VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQML 385
Query: 268 E--ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
E+V E+TIL+ + C L K LH Y L+ F ++ +ANA V Y KC
Sbjct: 386 AGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGS 445
Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
+ A+ +F G++SK V WNA+I +AQ++ + + + MK+S + P+ T+ LLS
Sbjct: 446 LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA 505
Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
C++ +L +GK +H +I + LE D+ + +++ +Y CG++ LF + + W
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
N ++ GY +G + AL F M G++ GI+ + + ACS
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACS 608
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/456 (27%), Positives = 218/456 (47%), Gaps = 15/456 (3%)
Query: 57 NIYAFMRKNGSEVDNF-----TIPTILKACAQVLMTHLGKEIHGFAI-KNGLDGDAYVSN 110
+ F+ + S D F + +L+A + +G++IH L D +
Sbjct: 65 TVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCT 124
Query: 111 ALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIR 169
+I MY+ CGS +R++FD + ++++ W+ +I Y R L +E LE EM D+
Sbjct: 125 RIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLL 184
Query: 170 PSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAK 229
P ++ A ++DV +G A+H VV+ E V + AL+ Y G + A
Sbjct: 185 PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVED--VFVGNALVSFYGTHGFVTDAL 242
Query: 230 QLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEEN----VFPSEITILSLIIEC 285
QLF+ + + ++VSW MI + E L EM+EEN P T+++++ C
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302
Query: 286 GFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
+ LGK +H + ++ + L + NAL+DMY KC I +A+ +F +K+V+ WN
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 362
Query: 346 AVISAYAQAHCIDKAFELFIHMKV--SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIE 403
++ ++ F++ M V+ +EVT++ + +C L K LH Y
Sbjct: 363 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 422
Query: 404 KQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALI 463
KQ + ++ A V YAKCG ++ A R+F + + WNA++ G+ +L
Sbjct: 423 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLD 482
Query: 464 FFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSV 499
+ M+ SG+ P+ T LL+ACS + GK V
Sbjct: 483 AHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEV 518
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 148/324 (45%), Gaps = 22/324 (6%)
Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILS------LIIECGFVGGLQLGKWLHAY 300
IS + ++++ R E + ++ S+ +L L+ G +++G+ +H
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQL 109
Query: 301 I-----LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAH 355
+ LRN + ++ MY C +R +FD ++SK++ WNAVIS+Y++
Sbjct: 110 VSGSTRLRN----DDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNE 165
Query: 356 CIDKAFELFIHM-KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILK 414
D+ E FI M + + P+ T ++ C + +G +H + K GL DV +
Sbjct: 166 LYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVG 225
Query: 415 TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVD-MERSG- 472
ALV Y G V A +LF R++ WN+M+ + +G EE+ + + ME +G
Sbjct: 226 NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 285
Query: 473 --VKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
P+ T + +L C+ + GK V V L L ++ ++D+ + G +
Sbjct: 286 GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK-LRLDKELVLNNALMDMYSKCGCIT 344
Query: 531 EAHEMIKSMPLRPNMIVWGALLAA 554
A +MI M N++ W ++
Sbjct: 345 NA-QMIFKMNNNKNVVSWNTMVGG 367
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/601 (33%), Positives = 341/601 (56%), Gaps = 8/601 (1%)
Query: 33 INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
+ L +++LV+S ++N + AL ++ M +G E D T+ ++++ CA++ + +
Sbjct: 164 VRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARS 223
Query: 93 IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
+HG + D D + N+L+ MYS+CG L+S+ +F+++ ++ VSW+ MI Y+RG
Sbjct: 224 VHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEF 283
Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
E+AL EM I P+ V + S++S + + GK++H VR D +++
Sbjct: 284 SEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYE-SLS 342
Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
AL+++Y++CG L+ + + ++ ++V+W +IS Y + + + LF +M+ + +
Sbjct: 343 LALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIK 402
Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGF--EFSLAMANALVDMYGKCREIRSAR 330
P T+ S I C G + LGK +H +++R EF + N+L+DMY K + SA
Sbjct: 403 PDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF---VQNSLIDMYSKSGSVDSAS 459
Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
T+F+ +K + V+ WN+++ ++Q +A LF +M S + NEVT + ++ C+ G
Sbjct: 460 TVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIG 519
Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMA 450
+LE GKW+H + GL+ D+ TAL+DMYAKCGD+N A +F R I W++M+
Sbjct: 520 SLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMIN 578
Query: 451 GYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLV 510
YGMHG A+ F M SG KPN + F+ +L+AC H+G V EGK F+ M G+
Sbjct: 579 AYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVS 637
Query: 511 PKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQ 570
P EH+ C +DLL R+G L EA+ IK MP + VWG+L+ ++H+ + +
Sbjct: 638 PNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKND 697
Query: 571 ILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIR 630
+ +I + GY L+SNIYA W + +R MK +KK PG+S++E++ V +F
Sbjct: 698 LSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGA 757
Query: 631 G 631
G
Sbjct: 758 G 758
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/489 (29%), Positives = 280/489 (57%), Gaps = 9/489 (1%)
Query: 54 SALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL--GKEIHGFAIKNGLDGDAYVSNA 111
+A+++Y + +++ F P++L+ACA HL G ++HG IK G+D DA + +
Sbjct: 83 AAIDLYHRLVSETTQISKFVFPSVLRACAGS-REHLSVGGKVHGRIIKGGVDDDAVIETS 141
Query: 112 LIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPS 171
L+ MY + G+L A +FD MP RD+V+WST++ G +AL + + M + P
Sbjct: 142 LLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPD 201
Query: 172 EVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQL 231
V MIS+V A++ + + +++H + R D L + +L+ MYSKCG+L ++++
Sbjct: 202 AVTMISVVEGCAELGCLRIARSVHGQITRKMFD--LDETLCNSLLTMYSKCGDLLSSERI 259
Query: 232 FNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGL 291
F ++ + + VSWT MIS Y R + +R F+EMI+ + P+ +T+ S++ CG +G +
Sbjct: 260 FEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLI 319
Query: 292 QLGKWLHAYILRNGFEFSL-AMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISA 350
+ GK +H + +R + + +++ ALV++Y +C ++ T+ + ++++ WN++IS
Sbjct: 320 REGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISL 379
Query: 351 YAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVD 410
YA + +A LF M +++P+ T+ +S C AG + +GK +H ++ + + D
Sbjct: 380 YAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVS-D 438
Query: 411 VILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMER 470
++ +L+DMY+K G V+ A +F++ +R + WN+M+ G+ +G EA+ F M
Sbjct: 439 EFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYH 498
Query: 471 SGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLD 530
S ++ N +TF+ ++ ACS G + +GK V K++ + + + ++D+ + G L+
Sbjct: 499 SYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI--ISGLKDLFTDTALIDMYAKCGDLN 556
Query: 531 EAHEMIKSM 539
A + ++M
Sbjct: 557 AAETVFRAM 565
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 193/387 (49%), Gaps = 17/387 (4%)
Query: 175 MISMVSLFADVADVDLGKAIHA--CVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLF 232
M + LF + + L +HA V + + L V T LI+ Y+ G+ ++ +F
Sbjct: 1 MTQYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPV---TKLIESYAFMGSPDSSRLVF 57
Query: 233 NRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIEC-GFVGGL 291
+ V+I + C+ ++ + L+ ++ E S+ S++ C G L
Sbjct: 58 EAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHL 117
Query: 292 QLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAY 351
+G +H I++ G + + +L+ MYG+ + A +FDGM +D++ W+ ++S+
Sbjct: 118 SVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSC 177
Query: 352 AQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
+ + KA +F M V P+ VTM+ ++ C E G L + + +H I ++ ++D
Sbjct: 178 LENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDE 237
Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
L +L+ MY+KCGD+ + R+F + ++ W AM++ Y E+AL F +M +S
Sbjct: 238 TLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKS 297
Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG----LVPKIEHYG-CMVDLLGRA 526
G++PN +T +L++C GL+ EGKS VHG L P E +V+L
Sbjct: 298 GIEPNLVTLYSVLSSCGLIGLIREGKS-----VHGFAVRRELDPNYESLSLALVELYAEC 352
Query: 527 GLLDEAHEMIKSMPLRPNMIVWGALLA 553
G L + +++ + R N++ W +L++
Sbjct: 353 GKLSDCETVLRVVSDR-NIVAWNSLIS 378
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/608 (34%), Positives = 333/608 (54%), Gaps = 13/608 (2%)
Query: 32 IINPLTRYNSLVTSYIKNNKPSSA---LNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH 88
I + +NSL+T Y +N SS+ + ++ MR + +T+ I KA + + +
Sbjct: 76 ICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSST 135
Query: 89 LGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYH 148
+G++ H +K GD YV +L+ MY + G + +F MP R+ +WSTM+ GY
Sbjct: 136 VGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYA 195
Query: 149 RGGLPEEALEV----MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
G EEA++V +RE + S+ +++S A V LG+ IH ++N
Sbjct: 196 TRGRVEEAIKVFNLFLREKE--EGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKN--- 250
Query: 205 EKLG-VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLF 263
LG VA++ AL+ MYSKC +L A ++F+ + ++W+ M++GY + E E V+LF
Sbjct: 251 GLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLF 310
Query: 264 AEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKC 323
+ M + PSE TI+ ++ C + L+ GK LH+++L+ GFE L ALVDMY K
Sbjct: 311 SRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKA 370
Query: 324 REIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
+ AR FD ++ +DV +W ++IS Y Q ++A L+ MK + + PN+ TM +L
Sbjct: 371 GCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVL 430
Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDIC 443
C+ LE+GK +H + K G ++V + +AL MY+KCG + +F +D+
Sbjct: 431 KACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVV 490
Query: 444 MWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKM 503
WNAM++G +G G+EAL F +M G++P+ +TF+ +++ACSH G V G F+ M
Sbjct: 491 SWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMM 550
Query: 504 VHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSM 563
+GL PK++HY CMVDLL RAG L EA E I+S + + +W LL+A K H +
Sbjct: 551 SDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCEL 610
Query: 564 GEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNG 623
G A +++ + + V +S IY R DV V + M+ V KE G S +E+
Sbjct: 611 GVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKN 670
Query: 624 LVHKFIRG 631
H F+ G
Sbjct: 671 QYHVFVVG 678
Score = 238 bits (608), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 250/475 (52%), Gaps = 19/475 (4%)
Query: 90 GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
G+ +HG I+ G +N L+ Y++CG L A +F+ + +DVVSW+++I GY +
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 150 GGLPEEALEVM---REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEK 206
G + VM REMR DI P+ + + + + +G+ HA VV K
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVV---KMSS 149
Query: 207 LG-VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
G + + T+L+ MY K G + ++F + + + +W+ M+SGY + E +++F
Sbjct: 150 FGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNL 209
Query: 266 MIEENVFPSE-----ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
+ E S+ +LS + +VG LG+ +H ++NG +A++NALV MY
Sbjct: 210 FLREKEEGSDSDYVFTAVLSSLAATIYVG---LGRQIHCITIKNGLLGFVALSNALVTMY 266
Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
KC + A +FD ++ + W+A+++ Y+Q +A +LF M + ++P+E T+V
Sbjct: 267 SKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIV 326
Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
G+L+ C++ LE GK LH+++ K G E + TALVDMYAK G + A + F R
Sbjct: 327 GVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQER 386
Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVF 500
D+ +W ++++GY + EEALI + M+ +G+ PN T +L ACS + GK V
Sbjct: 387 DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVH 446
Query: 501 DKMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
+ HG GL I + + + G L++ + + + P +++ W A+++
Sbjct: 447 GHTIKHGFGLEVPIG--SALSTMYSKCGSLEDGNLVFRRTP-NKDVVSWNAMISG 498
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 134/287 (46%), Gaps = 7/287 (2%)
Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
P T+L + L G+ +H I+R G + AN LV+ Y KC ++ A ++
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAF---ELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
F+ + KDV+ WN++I+ Y+Q I ++ +LF M+ + PN T+ G+ +
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
+ +G+ H + K D+ + T+LV MY K G V ++F+ R+ W+ M+
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMV 191
Query: 450 AGYGMHGCGEEALIFF--VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGL 507
+GY G EEA+ F E+ + F +L++ + V G+ + +
Sbjct: 192 SGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKN- 250
Query: 508 GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
GL+ + +V + + L+EA +M S R N I W A++
Sbjct: 251 GLLGFVALSNALVTMYSKCESLNEACKMFDSSGDR-NSITWSAMVTG 296
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 17/194 (8%)
Query: 370 SKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNG 429
+++ P+ T++ L+ ++ L G+ +H I + G + LV+ YAKCG +
Sbjct: 8 TELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAK 67
Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHG---CGEEALIFFVDMERSGVKPNGITFIGLLNA 486
A+ +F+ I +D+ WN+++ GY +G + F +M + PN T G+ A
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 487 CSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG------CMVDLLGRAGLLDEAHEMIKSMP 540
S T G+ LV K+ +G +V + +AGL+++ ++ MP
Sbjct: 128 ESSLQSSTVGRQAH-------ALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP 180
Query: 541 LRPNMIVWGALLAA 554
R N W +++
Sbjct: 181 ER-NTYTWSTMVSG 193
>sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protein At3g16610
OS=Arabidopsis thaliana GN=PCMP-E91 PE=2 SV=1
Length = 654
Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/593 (33%), Positives = 327/593 (55%), Gaps = 8/593 (1%)
Query: 33 INPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKE 92
INP+ ++ ++ +Y N+ AL++Y M +G +T P +LKACA + GK
Sbjct: 66 INPIA-WDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKL 124
Query: 93 IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
IH + D YV AL+ Y++CG L A +FDEMP RD+V+W+ MI G+
Sbjct: 125 IHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCC 184
Query: 153 PEEALEVMREMRFMD-IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
+ + + +MR +D + P+ ++ M + GKA+H R L +
Sbjct: 185 LTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDL--VV 242
Query: 212 ATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM-IEEN 270
T ++D+Y+K + YA+++F+ + + V+W+ MI GY+ I E +F +M + +N
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDN 302
Query: 271 V-FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
V + + I +++ C G L G+ +H Y ++ GF L + N ++ Y K + A
Sbjct: 303 VAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDA 362
Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
F + KDV+ +N++I+ +++F LF M+ S +RP+ T++G+L+ C+
Sbjct: 363 FRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHL 422
Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
AL G H Y G V+ + AL+DMY KCG ++ A R+F RDI WN M+
Sbjct: 423 AALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTML 482
Query: 450 AGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHG-LG 508
G+G+HG G+EAL F M+ +GV P+ +T + +L+ACSH+GLV EGK +F+ M G
Sbjct: 483 FGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFN 542
Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAA 568
++P+I+HY CM DLL RAG LDEA++ + MP P++ V G LL+A +KN +G +
Sbjct: 543 VIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVS 602
Query: 569 TQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEV 621
++ + VL+SN Y+ A RW D A +R + K+ + K PG+S V+V
Sbjct: 603 KKMQSLGETTESL-VLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 256/492 (52%), Gaps = 16/492 (3%)
Query: 76 TILKACAQVLMTHLGKEIHGFAIKNGLD-GDAYVSNALIQMYSECGSLVSARYLFDEMPN 134
++L+ C + LG+ IH +K L + V L ++Y+ C + AR++FDE+P+
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63
Query: 135 RDV--VSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
+ ++W MIR Y E+AL++ +M +RP++ ++ A + +D GK
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 193 AIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIR 252
IH+ V NC D + + TAL+D Y+KCG L A ++F+ + + +V+W MISG+
Sbjct: 124 LIHSHV--NCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 253 CNEINEGVRLFAEMIE-ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLA 311
+ + + LF +M + + P+ TI+ + G G L+ GK +H Y R GF L
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV 241
Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHM---- 367
+ ++D+Y K + I AR +FD K+ + W+A+I Y + I +A E+F M
Sbjct: 242 VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVND 301
Query: 368 KVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDV 427
V+ V P + ++ L C G L G+ +H Y K G +D+ ++ ++ YAK G +
Sbjct: 302 NVAMVTPVAIGLI--LMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSL 359
Query: 428 NGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNAC 487
A+R FSE +D+ +N+++ G ++ EE+ F +M SG++P+ T +G+L AC
Sbjct: 360 CDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTAC 419
Query: 488 SHAGLVTEGKSVFDK-MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI 546
SH + G S +VHG + I + ++D+ + G LD A + +M R +++
Sbjct: 420 SHLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDMYTKCGKLDVAKRVFDTMHKR-DIV 476
Query: 547 VWGALLAASKLH 558
W +L +H
Sbjct: 477 SWNTMLFGFGIH 488
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 363 bits (933), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 209/664 (31%), Positives = 348/664 (52%), Gaps = 43/664 (6%)
Query: 9 NLEQTRQCHAHIIKTHFKFSYTNIINPLTR-------------------------YNSLV 43
++E +Q HAH+ K + + N L +NSL+
Sbjct: 112 DMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLI 171
Query: 44 TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH---LGKEIHGFAIKN 100
+S K AL + M E +FT+ +++ AC+ + M +GK++H + ++
Sbjct: 172 SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK 231
Query: 101 GLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
G + ++++ N L+ MY + G L S++ L RD+V+W+T++ + EALE +
Sbjct: 232 G-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYL 290
Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYS 220
REM + P E + S++ + + + GK +HA ++N ++ + +AL+DMY
Sbjct: 291 REMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE-NSFVGSALVDMYC 349
Query: 221 KCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE-NVFPSEITIL 279
C + +++F+ + + W MI+GY + E + LF M E + + T+
Sbjct: 350 NCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMA 409
Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSK 339
++ C G + +H ++++ G + + N L+DMY + +I A +F M+ +
Sbjct: 410 GVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR 469
Query: 340 DVMIWNAVISAYAQAHCIDKAFELFIHM-----KVSK------VRPNEVTMVGLLSLCTE 388
D++ WN +I+ Y + + A L M KVSK ++PN +T++ +L C
Sbjct: 470 DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAA 529
Query: 389 AGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAM 448
AL GK +H Y K L DV + +ALVDMYAKCG + + ++F + +++ WN +
Sbjct: 530 LSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVI 589
Query: 449 MAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
+ YGMHG G+EA+ M GVKPN +TFI + ACSH+G+V EG +F M G
Sbjct: 590 IMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYG 649
Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI-VWGALLAASKLHKNPSMGEIA 567
+ P +HY C+VDLLGRAG + EA++++ MP N W +LL AS++H N +GEIA
Sbjct: 650 VEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIA 709
Query: 568 ATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHK 627
A ++++EP + VL++NIY+ A W+ VRR MKE V+KEPG S +E VHK
Sbjct: 710 AQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHK 769
Query: 628 FIRG 631
F+ G
Sbjct: 770 FVAG 773
Score = 263 bits (673), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 163/536 (30%), Positives = 277/536 (51%), Gaps = 22/536 (4%)
Query: 42 LVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNG 101
L+ S +++N A+ Y M G + DN+ P +LKA A + LGK+IH K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 102 LDGDAY-VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVM 160
D+ V+N L+ +Y +CG + +FD + R+ VSW+++I E ALE
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 161 REMRFMDIRPSEVAMISMVSLFADVADVD---LGKAIHACVVRNCKDEKLGVAIATALID 217
R M ++ PS ++S+V+ +++ + +GK +HA +R +L I L+
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK---GELNSFIINTLVA 244
Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
MY K G LA +K L +V+W ++S + ++ E + EM+ E V P E T
Sbjct: 245 MYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFT 304
Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNG-FEFSLAMANALVDMYGKCREIRSARTLFDGM 336
I S++ C + L+ GK LHAY L+NG + + + +ALVDMY C+++ S R +FDGM
Sbjct: 305 ISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGM 364
Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMG 395
+ + +WNA+I+ Y+Q +A LFI M+ S + N TM G++ C +GA
Sbjct: 365 FDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRK 424
Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
+ +H ++ K+GL+ D ++ L+DMY++ G ++ A R+F + RD+ WN M+ GY
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFS 484
Query: 456 GCGEEALIFFVDME-----------RSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
E+AL+ M+ R +KPN IT + +L +C+ + +GK + +
Sbjct: 485 EHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAI 544
Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKN 560
L + +VD+ + G L + ++ +P + N+I W ++ A +H N
Sbjct: 545 KN-NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGN 598
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 221/425 (52%), Gaps = 21/425 (4%)
Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
W ++R R L EA+ +M + I+P A +++ AD+ D++LGK IHA V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 200 RNCKDEKLG-----VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
K G V +A L+++Y KCG+ ++F+R+++ + VSW +IS
Sbjct: 125 ------KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFE 178
Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVG---GLQLGKWLHAYILRNGFEFSLA 311
+ + F M++ENV PS T++S++ C + GL +GK +HAY LR G E +
Sbjct: 179 KWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSF 237
Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
+ N LV MYGK ++ S++ L +D++ WN V+S+ Q + +A E M +
Sbjct: 238 IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297
Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG-LEVDVILKTALVDMYAKCGDVNGA 430
V P+E T+ +L C+ L GK LH Y K G L+ + + +ALVDMY C V
Sbjct: 298 VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSG 357
Query: 431 YRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS-GVKPNGITFIGLLNACSH 489
R+F R I +WNAM+AGY + +EAL+ F+ ME S G+ N T G++ AC
Sbjct: 358 RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVR 417
Query: 490 AGLVTEGKSVFDKMV-HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
+G + +++ +V GL +++ ++D+ R G +D A + M R +++ W
Sbjct: 418 SGAFSRKEAIHGFVVKRGLDRDRFVQN--TLMDMYSRLGKIDIAMRIFGKMEDR-DLVTW 474
Query: 549 GALLA 553
++
Sbjct: 475 NTMIT 479
>sp|Q9XE98|PP303_ARATH Pentatricopeptide repeat-containing protein At4g04370
OS=Arabidopsis thaliana GN=PCMP-E99 PE=3 SV=1
Length = 729
Score = 362 bits (930), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 190/555 (34%), Positives = 315/555 (56%), Gaps = 3/555 (0%)
Query: 76 TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
T+L+ + VL + +H FA+ G D D V N+++ +Y +C + A+ LFD+M R
Sbjct: 149 TLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR 208
Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
D+VSW+TMI GY G E L+++ MR +RP + + +S+ + D+++G+ +H
Sbjct: 209 DMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLH 268
Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
+V+ D + + + TALI MY KCG + ++ + VV WTVMISG +R
Sbjct: 269 CQIVKTGFD--VDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGR 326
Query: 256 INEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANA 315
+ + +F+EM++ S I S++ C +G LG +H Y+LR+G+ N+
Sbjct: 327 AEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNS 386
Query: 316 LVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP- 374
L+ MY KC + + +F+ M +D++ WNA+IS YAQ + KA LF MK V+
Sbjct: 387 LITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQV 446
Query: 375 NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF 434
+ T+V LL C+ AGAL +GK +H + + + ++ TALVDMY+KCG + A R F
Sbjct: 447 DSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCF 506
Query: 435 SEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVT 494
++D+ W ++AGYG HG G+ AL + + SG++PN + F+ +L++CSH G+V
Sbjct: 507 DSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQ 566
Query: 495 EGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
+G +F MV G+ P EH C+VDLL RA +++A + K RP++ V G +L A
Sbjct: 567 QGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDA 626
Query: 555 SKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEP 614
+ + + +I ++E++P + G+ V + + +A RW+DV+ M+ + +KK P
Sbjct: 627 CRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLP 686
Query: 615 GFSSVEVNGLVHKFI 629
G+S +E+NG F
Sbjct: 687 GWSKIEMNGKTTTFF 701
Score = 266 bits (679), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 155/539 (28%), Positives = 282/539 (52%), Gaps = 11/539 (2%)
Query: 30 TNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHL 89
++++N +NS + + L+ ++ M N D FT P++LKACA +
Sbjct: 5 SSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSF 64
Query: 90 GKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
G IH + NG D Y+S++L+ +Y++ G L AR +F+EM RDVV W+ MI Y R
Sbjct: 65 GLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSR 124
Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGV 209
G+ EA ++ EMRF I+P V ++ M+S ++ + + +H V D +
Sbjct: 125 AGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFD--CDI 179
Query: 210 AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
A+ +++++Y KC ++ AK LF+++ Q +VSW MISGY ++E ++L M +
Sbjct: 180 AVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGD 239
Query: 270 NVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSA 329
+ P + T + + G + L++G+ LH I++ GF+ + + AL+ MY KC + ++
Sbjct: 240 GLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEAS 299
Query: 330 RTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEA 389
+ + + +KDV+ W +IS + +KA +F M S + + +++ C +
Sbjct: 300 YRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQL 359
Query: 390 GALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMM 449
G+ ++G +H Y+ + G +D +L+ MYAKCG ++ + +F RD+ WNA++
Sbjct: 360 GSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAII 419
Query: 450 AGYGMHGCGEEALIFFVDMERSGVKP-NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLG 508
+GY + +AL+ F +M+ V+ + T + LL ACS AG + GK + ++
Sbjct: 420 SGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF- 478
Query: 509 LVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
+ P +VD+ + G L+ A S+ + +++ WG L+A H G+IA
Sbjct: 479 IRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-DVVSWGILIAGYGFHGK---GDIA 533
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 361 bits (927), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 199/516 (38%), Positives = 312/516 (60%), Gaps = 16/516 (3%)
Query: 128 LFDEMPNR-DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
LF+ ++ DV SW+++I R G EAL MR + + P+ + + + +
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 187 DVDLGKAIH--ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWT 244
D+ GK H A V D + +++ALI MYS CG L A+++F+ + + ++VSWT
Sbjct: 91 DIFSGKQTHQQAFVFGYQSD----IFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWT 146
Query: 245 VMISGYIRCNEINEGVRLFAEM-IEEN-----VFPSEITILSLIIECGFVGGLQLGKWLH 298
MI GY + V LF ++ ++EN +F + ++S+I C V L + +H
Sbjct: 147 SMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIH 206
Query: 299 AYILRNGFEFSLAMANALVDMYGKCRE--IRSARTLFDGMKSKDVMIWNAVISAYAQAHC 356
+++++ GF+ +++ N L+D Y K E + AR +FD + KD + +N+++S YAQ+
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266
Query: 357 IDKAFELFIHMKVSKVRP-NEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKT 415
++AFE+F + +KV N +T+ +L + +GAL +GK +H + + GLE DVI+ T
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 416 ALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKP 475
+++DMY KCG V A + F +++ W AM+AGYGMHG +AL F M SGV+P
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 476 NGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEM 535
N ITF+ +L ACSHAGL EG F+ M G+ P +EHYGCMVDLLGRAG L +A+++
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 536 IKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRW 595
I+ M ++P+ I+W +LLAA ++HKN + EI+ ++ E++ N GY +L+S+IYA A RW
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRW 506
Query: 596 NDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
DV VR +MK + K PGFS +E+NG VH F+ G
Sbjct: 507 KDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIG 542
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/429 (30%), Positives = 232/429 (54%), Gaps = 15/429 (3%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
+NS++ ++ + AL ++ MRK + P +KAC+ + GK+ H A
Sbjct: 44 WNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAF 103
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
G D +VS+ALI MYS CG L AR +FDE+P R++VSW++MIRGY G +A+
Sbjct: 104 VFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVS 163
Query: 159 VMREMRFMDIRPSEVAM-------ISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAI 211
+ +++ +D + AM +S++S + V L ++IH+ V++ D GV++
Sbjct: 164 LFKDL-LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR--GVSV 220
Query: 212 ATALIDMYSKCGN--LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEE 269
L+D Y+K G +A A+++F+++ VS+ ++S Y + NE +F +++
Sbjct: 221 GNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKN 280
Query: 270 NVFP-SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRS 328
V + IT+ ++++ G L++GK +H ++R G E + + +++DMY KC + +
Sbjct: 281 KVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVET 340
Query: 329 ARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTE 388
AR FD MK+K+V W A+I+ Y KA ELF M S VRPN +T V +L+ C+
Sbjct: 341 ARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSH 400
Query: 389 AGA-LEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWN 446
AG +E +W + + G+E + +VD+ + G + AY L + D +W+
Sbjct: 401 AGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWS 460
Query: 447 AMMAGYGMH 455
+++A +H
Sbjct: 461 SLLAACRIH 469
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 356 bits (914), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/595 (32%), Positives = 333/595 (55%), Gaps = 11/595 (1%)
Query: 29 YTNIINP-LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMT 87
++ I NP + + +++ Y K+N SAL I+ MR +G E++N T+ +++ AC + M
Sbjct: 308 FSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 88 HLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLF---DEMPNRDVVSWSTMI 144
++H + K+G D+ V+ ALI MYS+ G + + +F D++ +++V+ MI
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMI 425
Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
+ + P +A+ + M +R E ++ S++S+ + ++LGK +H +++
Sbjct: 426 TSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKS--G 480
Query: 205 EKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFA 264
L + + ++L +YSKCG+L + +LF + W MISG+ + E + LF+
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFS 540
Query: 265 EMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCR 324
EM+++ P E T+ +++ C L GK +H Y LR G + + + +ALV+MY KC
Sbjct: 541 EMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG 600
Query: 325 EIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLS 384
++ AR ++D + D + +++IS Y+Q I F LF M +S + + +L
Sbjct: 601 SLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILK 660
Query: 385 LCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICM 444
+ +G +H YI K GL + + ++L+ MY+K G ++ + FS+ D+
Sbjct: 661 AAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIA 720
Query: 445 WNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMV 504
W A++A Y HG EAL + M+ G KP+ +TF+G+L+ACSH GLV E + MV
Sbjct: 721 WTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMV 780
Query: 505 HGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMG 564
G+ P+ HY CMVD LGR+G L EA I +M ++P+ +VWG LLAA K+H +G
Sbjct: 781 KDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELG 840
Query: 565 EIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
++AA + +E+EP + G + +SNI A W++V R++MK V+KEPG+SSV
Sbjct: 841 KVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/502 (26%), Positives = 253/502 (50%), Gaps = 8/502 (1%)
Query: 40 NSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIK 99
N +++ Y ++ +L ++ M G E + + +++ AC+ + + + IK
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIK 178
Query: 100 NGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEV 159
G V +ALI ++S+ A +F + + +V W+T+I G R ++
Sbjct: 179 MGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDL 238
Query: 160 MREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMY 219
EM +P S+++ A + + GK + A V++ C E V + TA++D+Y
Sbjct: 239 FHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIK-CGAED--VFVCTAIVDLY 295
Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITIL 279
+KCG++A A ++F+R+ SVVSWTVM+SGY + N+ + +F EM V + T+
Sbjct: 296 AKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVT 355
Query: 280 SLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS- 338
S+I CG + +HA++ ++GF ++A AL+ MY K +I + +F+ +
Sbjct: 356 SVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDI 415
Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWL 398
+ I N +I++++Q+ KA LF M +R +E ++ LLS+ L +GK +
Sbjct: 416 QRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQV 472
Query: 399 HTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCG 458
H Y K GL +D+ + ++L +Y+KCG + +Y+LF ++D W +M++G+ +G
Sbjct: 473 HGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYL 532
Query: 459 EEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC 518
EA+ F +M G P+ T +L CS + GK + + G+ ++
Sbjct: 533 REAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRA-GIDKGMDLGSA 591
Query: 519 MVDLLGRAGLLDEAHEMIKSMP 540
+V++ + G L A ++ +P
Sbjct: 592 LVNMYSKCGSLKLARQVYDRLP 613
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/545 (24%), Positives = 251/545 (46%), Gaps = 55/545 (10%)
Query: 27 FSYTNIINPLTRY-NSLVTSYIKNNKPSSALNIYAFMR-KNGSEVDNFTIPTILKACAQV 84
FS + +++ +T + N L S ++ S+ N + F ++ S + N IL+A +
Sbjct: 17 FSTSRLLSSVTNFRNQLSFSSKDSSSSSAPFNPFRFFNDQSNSRLCNLRTTKILQA--HL 74
Query: 85 LMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMI 144
L +L L D +++ +L+ YS GS+ A LFD +P DVVS + MI
Sbjct: 75 LRRYL------------LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMI 122
Query: 145 RGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD 204
GY + L EE+L +M F+ +E++ S++S + + + + C C
Sbjct: 123 SGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELV--C----CHT 176
Query: 205 EKLGV----AIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGV 260
K+G + +ALID++SK A ++F +V W +I+G +R
Sbjct: 177 IKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVF 236
Query: 261 RLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY 320
LF EM P T S++ C + L+ GK + A +++ G E + + A+VD+Y
Sbjct: 237 DLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLY 295
Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
KC + A +F + + V+ W ++S Y +++ A E+F M+ S V N T+
Sbjct: 296 AKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVT 355
Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
++S C + +H ++ K G +D + AL+ MY+K GD++ SE ++
Sbjct: 356 SVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDID-----LSEQVFE 410
Query: 441 DI------CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNA--CSHAGL 492
D+ + N M+ + +A+ F M + G++ + + LL+ C + G
Sbjct: 411 DLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG- 469
Query: 493 VTEGKSVFDKMVHGL----GLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVW 548
K VHG GLV + + L + G L+E++++ + +P + N W
Sbjct: 470 ---------KQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNA-CW 519
Query: 549 GALLA 553
++++
Sbjct: 520 ASMIS 524
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 354 bits (908), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 176/536 (32%), Positives = 293/536 (54%), Gaps = 34/536 (6%)
Query: 128 LFDEMPNR-DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVA 186
+F +P+ + + ++ +R R P + + +R + R + + + ++ + V+
Sbjct: 66 VFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVS 125
Query: 187 DVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVM 246
+ G +H + + T +DMY+ CG + YA+ +F+ ++ VV+W M
Sbjct: 126 ALFEGMELHGVAFKIAT--LCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTM 183
Query: 247 ISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGF 306
I Y R ++E +LF EM + NV P E+ + +++ CG G ++ + ++ +++ N
Sbjct: 184 IERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDV 243
Query: 307 EFSLAMANALVDMYG-------------------------------KCREIRSARTLFDG 335
+ ALV MY KC + A+ +FD
Sbjct: 244 RMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQ 303
Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
+ KD++ W +ISAY ++ +A +F M S ++P+ V+M ++S C G L+
Sbjct: 304 TEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA 363
Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
KW+H+ I GLE ++ + AL++MYAKCG ++ +F + R++ W++M+ MH
Sbjct: 364 KWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMH 423
Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
G +AL F M++ V+PN +TF+G+L CSH+GLV EGK +F M + PK+EH
Sbjct: 424 GEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEH 483
Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
YGCMVDL GRA LL EA E+I+SMP+ N+++WG+L++A ++H +G+ AA +ILE+E
Sbjct: 484 YGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELE 543
Query: 576 PQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
P + G VLMSNIYA RW DV +RRVM+E V KE G S ++ NG H+F+ G
Sbjct: 544 PDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIG 599
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 145/504 (28%), Positives = 255/504 (50%), Gaps = 56/504 (11%)
Query: 9 NLEQTRQCHAHIIKT-------HFKFS----------------YTNIINPLTR--YNSLV 43
+L +Q HAHI++T F F+ +++I +P +N +
Sbjct: 24 SLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFL 83
Query: 44 TSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD 103
++++P + + Y +R G +D F+ ILKA ++V G E+HG A K
Sbjct: 84 RDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATL 143
Query: 104 GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM 163
D +V + MY+ CG + AR +FDEM +RDVV+W+TMI Y R GL +EA ++ EM
Sbjct: 144 CDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEM 203
Query: 164 RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--------------------CK 203
+ ++ P E+ + ++VS ++ +AI+ ++ N C
Sbjct: 204 KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCM 263
Query: 204 D------EKLGVA---IATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCN 254
D K+ V ++TA++ YSKCG L A+ +F++ + +V WT MIS Y+ +
Sbjct: 264 DMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESD 323
Query: 255 EINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMAN 314
E +R+F EM + P +++ S+I C +G L KW+H+ I NG E L++ N
Sbjct: 324 YPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINN 383
Query: 315 ALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRP 374
AL++MY KC + + R +F+ M ++V+ W+++I+A + A LF MK V P
Sbjct: 384 ALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEP 443
Query: 375 NEVTMVGLLSLCTEAGALEMGKWLH-TYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRL 433
NEVT VG+L C+ +G +E GK + + ++ + + +VD++ + + A +
Sbjct: 444 NEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEV 503
Query: 434 F-SEAIYRDICMWNAMMAGYGMHG 456
S + ++ +W ++M+ +HG
Sbjct: 504 IESMPVASNVVIWGSLMSACRIHG 527
>sp|Q9LJR6|PP253_ARATH Putative pentatricopeptide repeat-containing protein At3g25060,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E96 PE=3
SV=1
Length = 601
Score = 353 bits (905), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 186/544 (34%), Positives = 314/544 (57%), Gaps = 14/544 (2%)
Query: 92 EIHGFAIKNG--LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHR 149
+IH F I G L+G + +S LI G + AR +FDE+P R V +++MI Y R
Sbjct: 35 QIHAFVISTGNLLNGSS-ISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSR 93
Query: 150 GGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG- 208
G P+E L + +M I+P + ++ G+A+ CK G
Sbjct: 94 GKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVW------CKAVDFGY 147
Query: 209 ---VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAE 265
V + ++++++Y KCG + A+ LF ++ + V+ WT M++G+ + + + V + E
Sbjct: 148 KNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYRE 207
Query: 266 MIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCRE 325
M E + +L L+ G +G ++G+ +H Y+ R G ++ + +LVDMY K
Sbjct: 208 MQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGF 267
Query: 326 IRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSL 385
I A +F M K + W ++IS +AQ +KAFE + M+ +P+ VT+VG+L
Sbjct: 268 IEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVA 327
Query: 386 CTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMW 445
C++ G+L+ G+ +H YI K+ + +D + TAL+DMY+KCG ++ + +F +D+ W
Sbjct: 328 CSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCW 386
Query: 446 NAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVH 505
N M++ YG+HG G+E + F+ M S ++P+ TF LL+A SH+GLV +G+ F M++
Sbjct: 387 NTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMIN 446
Query: 506 GLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGE 565
+ P +HY C++DLL RAG ++EA +MI S L + +W ALL+ H+N S+G+
Sbjct: 447 KYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGD 506
Query: 566 IAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLV 625
IAA +IL++ P + G L+SN +A AN+W +VA VR++M+ ++K PG+S++EVNG +
Sbjct: 507 IAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGEL 566
Query: 626 HKFI 629
F+
Sbjct: 567 RTFL 570
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 212/415 (51%), Gaps = 5/415 (1%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
YNS++ Y + P L +Y M + D+ T +KAC L+ G+ + A+
Sbjct: 84 YNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAV 143
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
G D +V ++++ +Y +CG + A LF +M RDV+ W+TM+ G+ + G +A+E
Sbjct: 144 DFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVE 203
Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
REM+ V M+ ++ D+ D +G+++H + R + V + T+L+DM
Sbjct: 204 FYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRT--GLPMNVVVETSLVDM 261
Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
Y+K G + A ++F+R+ + VSW +ISG+ + N+ EM P +T+
Sbjct: 262 YAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTL 321
Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
+ +++ C VG L+ G+ +H YIL+ A AL+DMY KC + S+R +F+ +
Sbjct: 322 VGVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGR 380
Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK-W 397
KD++ WN +IS Y + LF+ M S + P+ T LLS + +G +E G+ W
Sbjct: 381 KDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHW 440
Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMMAG 451
I K ++ L+D+ A+ G V A + SE + + +W A+++G
Sbjct: 441 FSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSG 495
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 352 bits (904), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 188/542 (34%), Positives = 300/542 (55%), Gaps = 14/542 (2%)
Query: 92 EIHGFAIKNGLDGDAYVSNALIQMYSECG---SLVSARYLFDEMPNRDVVSWSTMIRGYH 148
++HG IK+ + + + LI + C +L AR +F+ + V W++MIRGY
Sbjct: 24 QLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYS 83
Query: 149 RGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG 208
P++AL +EM P ++ + + D+ G +H VV+ ++
Sbjct: 84 NSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKT--GFEVN 141
Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
+ ++T L+ MY CG + Y ++F + Q +VV+W +ISG++ N ++ + F EM
Sbjct: 142 MYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQS 201
Query: 269 ENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFE--------FSLAMANALVDMY 320
V +E ++ L++ CG + GKW H ++ GF+ F++ +A +L+DMY
Sbjct: 202 NGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMY 261
Query: 321 GKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMV 380
KC ++R+AR LFDGM + ++ WN++I+ Y+Q ++A +F+ M + P++VT +
Sbjct: 262 AKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFL 321
Query: 381 GLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR 440
++ G ++G+ +H Y+ K G D + ALV+MYAK GD A + F + +
Sbjct: 322 SVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKK 381
Query: 441 DICMWNAMMAGYGMHGCGEEALIFFVDMERSG-VKPNGITFIGLLNACSHAGLVTEGKSV 499
D W ++ G HG G EAL F M+ G P+GIT++G+L ACSH GLV EG+
Sbjct: 382 DTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRY 441
Query: 500 FDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHK 559
F +M GL P +EHYGCMVD+L RAG +EA ++K+MP++PN+ +WGALL +H+
Sbjct: 442 FAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHE 501
Query: 560 NPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSV 619
N + + + + E E G VL+SNIYA A RW DV +R MK RV K G SSV
Sbjct: 502 NLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSV 561
Query: 620 EV 621
E
Sbjct: 562 ET 563
Score = 226 bits (575), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 226/426 (53%), Gaps = 9/426 (2%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
+NS++ Y + P AL Y M + G D FT P +LKAC+ + G +HGF +
Sbjct: 75 WNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVV 134
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
K G + + YVS L+ MY CG + +F+++P +VV+W ++I G+ +A+E
Sbjct: 135 KTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIE 194
Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKD----EKLG--VAIA 212
REM+ ++ +E M+ ++ D+ GK H + D K+G V +A
Sbjct: 195 AFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILA 254
Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
T+LIDMY+KCG+L A+ LF+ + + ++VSW +I+GY + + E + +F +M++ +
Sbjct: 255 TSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIA 314
Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
P ++T LS+I G QLG+ +HAY+ + GF A+ ALV+MY K + SA+
Sbjct: 315 PDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKA 374
Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK-VSKVRPNEVTMVGLLSLCTEAGA 391
F+ ++ KD + W VI A ++A +F M+ P+ +T +G+L C+ G
Sbjct: 375 FEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGL 434
Query: 392 LEMG-KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLF-SEAIYRDICMWNAMM 449
+E G ++ + GLE V +VD+ ++ G A RL + + ++ +W A++
Sbjct: 435 VEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALL 494
Query: 450 AGYGMH 455
G +H
Sbjct: 495 NGCDIH 500
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 105/216 (48%), Gaps = 3/216 (1%)
Query: 36 LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
L +NS++T Y +N AL ++ M G D T ++++A + LG+ IH
Sbjct: 282 LVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHA 341
Query: 96 FAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEE 155
+ K G DA + AL+ MY++ G SA+ F+++ +D ++W+ +I G G E
Sbjct: 342 YVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNE 401
Query: 156 ALEVMREMRFM-DIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATA 214
AL + + M+ + P + + ++ + + V+ G+ A +R+ + V
Sbjct: 402 ALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFA-EMRDLHGLEPTVEHYGC 460
Query: 215 LIDMYSKCGNLAYAKQLFNRLN-QNSVVSWTVMISG 249
++D+ S+ G A++L + + +V W +++G
Sbjct: 461 MVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNG 496
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 352 bits (903), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 217/646 (33%), Positives = 334/646 (51%), Gaps = 51/646 (7%)
Query: 14 RQCHAHIIKTHFKFSYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFT 73
R I K+ K + + +N ++SY++ + + AL ++ M + S N
Sbjct: 42 RATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGM 101
Query: 74 IPTILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP 133
I L+ L L E+ + D N +I+ Y +L AR LF+ MP
Sbjct: 102 ISGYLRNGEFELARKLFDEMP--------ERDLVSWNVMIKGYVRNRNLGKARELFEIMP 153
Query: 134 NRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVD---- 189
RDV SW+TM+ GY + G ++A V M ++V+ +++S + + ++
Sbjct: 154 ERDVCSWNTMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACM 209
Query: 190 --LGKAIHACVVRNC------KDEKL-------------GVAIATALIDMYSKCGNLAYA 228
+ A V NC K +K+ V +I Y++ G + A
Sbjct: 210 LFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEA 269
Query: 229 KQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFV 288
+QLF+ V +WT M+SGYI+ + E LF +M E N E++ +++ G+V
Sbjct: 270 RQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERN----EVSWNAML--AGYV 323
Query: 289 GG--LQLGKWLHAYI-LRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWN 345
G +++ K L + RN ++ N ++ Y +C +I A+ LFD M +D + W
Sbjct: 324 QGERMEMAKELFDVMPCRN-----VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWA 378
Query: 346 AVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQ 405
A+I+ Y+Q+ +A LF+ M+ R N + LS C + ALE+GK LH + K
Sbjct: 379 AMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKG 438
Query: 406 GLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFF 465
G E + AL+ MY KCG + A LF E +DI WN M+AGY HG GE AL FF
Sbjct: 439 GYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFF 498
Query: 466 VDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGR 525
M+R G+KP+ T + +L+ACSH GLV +G+ F M G++P +HY CMVDLLGR
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGR 558
Query: 526 AGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLM 585
AGLL++AH ++K+MP P+ +WG LL AS++H N + E AA +I +EP+N G VL+
Sbjct: 559 AGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLL 618
Query: 586 SNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
SN+YA + RW DV +R M++ VKK PG+S +E+ H F G
Sbjct: 619 SNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVG 664
>sp|Q9SJ73|PP148_ARATH Pentatricopeptide repeat-containing protein At2g04860
OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3
Length = 692
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/570 (33%), Positives = 316/570 (55%), Gaps = 9/570 (1%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
+N+L+ Y +N A ++ M + G T+ +L C Q G+ +HG A
Sbjct: 119 WNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAA 178
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
K+GL+ D+ V NALI YS+C L SA LF EM ++ VSW+TMI Y + GL EEA+
Sbjct: 179 KSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAIT 238
Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
V + M ++ S V +I+++S A V+ L + C + N +++ T+L+
Sbjct: 239 VFKNMFEKNVEISPVTIINLLS--AHVSHEPLHCLVVKCGMVN------DISVVTSLVCA 290
Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
YS+CG L A++L+ Q+S+V T ++S Y +++ V F++ + + + +
Sbjct: 291 YSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVAL 350
Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
+ ++ C + +G LH Y +++G + N L+ MY K ++ + LF+ ++
Sbjct: 351 VGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQE 410
Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMGKW 397
++ WN+VIS Q+ AFE+F M ++ + P+ +T+ LL+ C++ L +GK
Sbjct: 411 TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE 470
Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
LH Y + E + + TAL+DMYAKCG+ A +F WN+M++GY + G
Sbjct: 471 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 530
Query: 458 GEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYG 517
AL +++M G+KP+ ITF+G+L+AC+H G V EGK F M+ G+ P ++HY
Sbjct: 531 QHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYA 590
Query: 518 CMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQ 577
MV LLGRA L EA +I M ++P+ VWGALL+A +H+ +GE A ++ ++ +
Sbjct: 591 LMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYK 650
Query: 578 NYGYNVLMSNIYAVANRWNDVAGVRRVMKE 607
N G VLMSN+YA W+DV VR +MK+
Sbjct: 651 NGGLYVLMSNLYATEAMWDDVVRVRNMMKD 680
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 141/529 (26%), Positives = 249/529 (47%), Gaps = 21/529 (3%)
Query: 36 LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTH--LGKEI 93
L+ ++SL+ S I SS + I+ + ++ ++FT+ L+A + +++
Sbjct: 13 LSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQV 72
Query: 94 HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
K+GLD YV +L+ +Y + G + SA+ LFDEMP RD V W+ +I GY R G
Sbjct: 73 QTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYE 132
Query: 154 EEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIAT 213
+A ++ M PS +++++ V G+++H ++ +L +
Sbjct: 133 CDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKS--GLELDSQVKN 190
Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
ALI YSKC L A+ LF + S VSW MI Y + E + +F M E+NV
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI 250
Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
S +TI++L+ + LH +++ G +++ +LV Y +C + SA L+
Sbjct: 251 SPVTIINLL------SAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLY 304
Query: 334 DGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
K ++ +++S YA+ +D A F + ++ + V +VG+L C ++ ++
Sbjct: 305 ASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHID 364
Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
+G LH Y K GL ++ L+ MY+K DV LF + + WN++++G
Sbjct: 365 IGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCV 424
Query: 454 MHGCGEEAL-IFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
G A +F M G+ P+ IT LL CS + GK +HG L
Sbjct: 425 QSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE-----LHGYTLRNN 479
Query: 513 I--EHYGC--MVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
E++ C ++D+ + G +A + KS+ P W ++++ L
Sbjct: 480 FENENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTATWNSMISGYSL 527
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 181/371 (48%), Gaps = 18/371 (4%)
Query: 135 RDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLG--- 191
RD+ + ++++ G + + + R++ + P+ M S+F
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTM----SIFLQATTTSFNSFK 66
Query: 192 ---KAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMIS 248
+ + + ++ D V + T+L+++Y K G + A+ LF+ + + V W +I
Sbjct: 67 LQVEQVQTHLTKSGLDRF--VYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALIC 124
Query: 249 GYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF 308
GY R + +LF M+++ PS T+++L+ CG G + G+ +H ++G E
Sbjct: 125 GYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLEL 184
Query: 309 SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMK 368
+ NAL+ Y KC E+ SA LF MK K + WN +I AY+Q+ ++A +F +M
Sbjct: 185 DSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMF 244
Query: 369 VSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVN 428
V + VT++ LLS A + LH + K G+ D+ + T+LV Y++CG +
Sbjct: 245 EKNVEISPVTIINLLS------AHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLV 298
Query: 429 GAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACS 488
A RL++ A I ++++ Y G + A+++F + +K + + +G+L+ C
Sbjct: 299 SAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCK 358
Query: 489 HAGLVTEGKSV 499
+ + G S+
Sbjct: 359 KSSHIDIGMSL 369
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 89/160 (55%), Gaps = 1/160 (0%)
Query: 34 NPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEV-DNFTIPTILKACAQVLMTHLGKE 92
PL +NS+++ +++ + S+A ++ M G + D TI ++L C+Q+ +LGKE
Sbjct: 411 TPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE 470
Query: 93 IHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGL 152
+HG+ ++N + + +V ALI MY++CG+ V A +F + +W++MI GY GL
Sbjct: 471 LHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGL 530
Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGK 192
AL EMR ++P E+ + ++S VD GK
Sbjct: 531 QHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGK 570
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 350 bits (898), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/599 (32%), Positives = 338/599 (56%), Gaps = 11/599 (1%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
+N+L++ Y+K + + A + M + + + + A + +G +
Sbjct: 182 WNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLML 241
Query: 99 KNGLD--GDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEA 156
K G + D +V ++ I MY+E G + S+R +FD R++ W+TMI Y + E+
Sbjct: 242 KLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVES 301
Query: 157 LEVMRE-MRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATAL 215
+E+ E + +I EV + S + + V+LG+ H V +N ++ L + I +L
Sbjct: 302 IELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRE--LPIVIVNSL 359
Query: 216 IDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSE 275
+ MYS+CG++ + +F + + VVSW MIS +++ +EG+ L EM ++
Sbjct: 360 MVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDY 419
Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
IT+ +L+ + ++GK HA+++R G +F M + L+DMY K IR ++ LF+G
Sbjct: 420 ITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEG 478
Query: 336 --MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALE 393
+D WN++IS Y Q +K F +F M +RPN VT+ +L C++ G+++
Sbjct: 479 SGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVD 538
Query: 394 MGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYG 453
+GK LH + +Q L+ +V + +ALVDMY+K G + A +FS+ R+ + M+ GYG
Sbjct: 539 LGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYG 598
Query: 454 MHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKI 513
HG GE A+ F+ M+ SG+KP+ ITF+ +L+ACS++GL+ EG +F++M + P
Sbjct: 599 QHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSS 658
Query: 514 EHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMI-VWGALLAASKLHKNPSMGEIAATQIL 572
EHY C+ D+LGR G ++EA+E +K + N+ +WG+LL + KLH + E + ++
Sbjct: 659 EHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLA 718
Query: 573 EIEP-QNY-GYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFI 629
+ + +N+ GY VL+SN+YA +W V VRR M+E +KKE G S +E+ G V+ F+
Sbjct: 719 KFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFV 777
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/563 (25%), Positives = 276/563 (49%), Gaps = 26/563 (4%)
Query: 29 YTNIINPLT-RYNSLVTSYIKNNKPSSALNIYAFMRKNG--SEVDNFTIPTILKACAQVL 85
+ I P T +N+++ +I NN P AL Y+ M+K + D +T + LKACA+
Sbjct: 62 FDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETK 121
Query: 86 MTHLGKEIHGFAIKNGLDGDAYVSNALIQMY------SECGSLVSARYLFDEMPNRDVVS 139
GK +H I+ + V N+L+ MY +C R +FD M ++VV+
Sbjct: 122 NLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVA 181
Query: 140 WSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVV 199
W+T+I Y + G EA M M+++PS V+ +++ + + + ++
Sbjct: 182 WNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLML 241
Query: 200 RNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEG 259
+ + + + ++ I MY++ G++ ++++F+ + ++ W MI Y++ + + E
Sbjct: 242 KLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVES 301
Query: 260 VRLFAEMI-EENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVD 318
+ LF E I + + E+T L + ++LG+ H ++ +N E + + N+L+
Sbjct: 302 IELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV 361
Query: 319 MYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVT 378
MY +C + + +F M+ +DV+ WN +ISA+ Q D+ L M+ + + +T
Sbjct: 362 MYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYIT 421
Query: 379 MVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAI 438
+ LLS + E+GK H ++ +QG++ + + + L+DMY+K G + + +LF +
Sbjct: 422 VTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSG 480
Query: 439 Y--RDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEG 496
Y RD WN+M++GY +G E+ + F M ++PN +T +L ACS G V G
Sbjct: 481 YAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLG 540
Query: 497 KSVFDKMVHGLGLVPKIEH----YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALL 552
K +HG + ++ +VD+ +AG + A +M R N + + ++
Sbjct: 541 KQ-----LHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKER-NSVTYTTMI 594
Query: 553 AASKLHKNPSMGEIAATQILEIE 575
H MGE A + L ++
Sbjct: 595 LGYGQH---GMGERAISLFLSMQ 614
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 221/447 (49%), Gaps = 26/447 (5%)
Query: 125 ARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMR----FMDIRPSEVAMISMVS 180
AR LFD +P V W+T+I G+ LP EAL M+ F + + S +
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYS--STLK 115
Query: 181 LFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLA------YAKQLFNR 234
A+ ++ GKA+H ++R ++ + +L++MY C N +++F+
Sbjct: 116 ACAETKNLKAGKAVHCHLIRCLQNSSR--VVHNSLMNMYVSCLNAPDCFEYDVVRKVFDN 173
Query: 235 LNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLG 294
+ + +VV+W +IS Y++ E R F M+ V PS ++ +++ ++
Sbjct: 174 MRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKA 233
Query: 295 KWLHAYILRNGFEF--SLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYA 352
+ +L+ G E+ L + ++ + MY + +I S+R +FD +++ +WN +I Y
Sbjct: 234 NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYV 293
Query: 353 QAHCIDKAFELFIHMKVSK-VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDV 411
Q C+ ++ ELF+ SK + +EVT + S + +E+G+ H ++ K E+ +
Sbjct: 294 QNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPI 353
Query: 412 ILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERS 471
++ +L+ MY++CG V+ ++ +F RD+ WN M++ + +G +E L+ +M++
Sbjct: 354 VIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 413
Query: 472 GVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGC---MVDLLGRAGL 528
G K + IT LL+A S+ K + K H + I+ G ++D+ ++GL
Sbjct: 414 GFKIDYITVTALLSAASN----LRNKEI-GKQTHAFLIRQGIQFEGMNSYLIDMYSKSGL 468
Query: 529 LDEAHEMIK-SMPLRPNMIVWGALLAA 554
+ + ++ + S + W ++++
Sbjct: 469 IRISQKLFEGSGYAERDQATWNSMISG 495
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 165/343 (48%), Gaps = 13/343 (3%)
Query: 223 GNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPS--EITILS 280
GN A+QLF+ + + + V W +I G+I N +E + ++ M + F + T S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMY------GKCREIRSARTLFD 334
+ C L+ GK +H +++R S + N+L++MY C E R +FD
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 335 GMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEM 394
M+ K+V+ WN +IS Y + +A F M +V+P+ V+ V + + + +++
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 395 GKWLHTYIEKQGLEV--DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
+ + K G E D+ + ++ + MYA+ GD+ + R+F + R+I +WN M+ Y
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVY 292
Query: 453 GMHGCGEEALIFFVD-MERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVP 511
+ C E++ F++ + + + +T++ +A S V G+ + +P
Sbjct: 293 VQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP 352
Query: 512 KIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAA 554
+ MV + R G + ++ + SM R +++ W +++A
Sbjct: 353 IVIVNSLMV-MYSRCGSVHKSFGVFLSMRER-DVVSWNTMISA 393
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 197/634 (31%), Positives = 340/634 (53%), Gaps = 45/634 (7%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRK------------------NGSEVD---------- 70
YNSL++ Y K+ + A +++ MR+ NG E+D
Sbjct: 100 YNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLE 159
Query: 71 ------NFTIPTILKACAQVLMTHLGKEIHGFAIKNG-LDGDAYVSNALIQMYSEC-GSL 122
++ +++AC+ +G+ GF +K G + D V +LI M+ + S
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF 219
Query: 123 VSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLF 182
+A +FD+M +VV+W+ MI + G P EA+ +M + + S+ S
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 183 ADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKC---GNLAYAKQLFNRLNQNS 239
A++ ++ LGK +H+ +R+ L + +L+DMY+KC G++ +++F+R+ +S
Sbjct: 280 AELENLSLGKQLHSWAIRS----GLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHS 335
Query: 240 VVSWTVMISGYIR-CNEINEGVRLFAEMIEE-NVFPSEITILSLIIECGFVGGLQLGKWL 297
V+SWT +I+GY++ CN E + LF+EMI + +V P+ T S CG + ++GK +
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
+ G + ++AN+++ M+ K + A+ F+ + K+++ +N + +
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
++AF+L + ++ + T LLS G++ G+ +H+ + K GL + + AL
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
+ MY+KCG ++ A R+F+ R++ W +M+ G+ HG L F M GVKPN
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 575
Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIK 537
+T++ +L+ACSH GLV+EG F+ M + PK+EHY CMVDLL RAGLL +A E I
Sbjct: 576 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 635
Query: 538 SMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWND 597
+MP + +++VW L A ++H N +G++AA +ILE++P + +SNIYA A +W +
Sbjct: 636 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 695
Query: 598 VAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
+RR MKE + KE G S +EV +HKF G
Sbjct: 696 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVG 729
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 132/541 (24%), Positives = 255/541 (47%), Gaps = 15/541 (2%)
Query: 28 SYTNIINPLTRYNSLVTSYIKNNKPSSALNIYAFMRKNG-SEVDNFTIPTILKACAQVLM 86
S ++ N + + L+ ++ A++ M ++G +D+ T ++LK+C +
Sbjct: 18 SQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARD 77
Query: 87 THLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMP---NRDVVSWSTM 143
LGK +H I+ ++ D+ + N+LI +YS+ G A +F+ M RDVVSWS M
Sbjct: 78 FRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAM 137
Query: 144 IRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCK 203
+ Y G +A++V E + + P++ +++ ++ V +G+ +++
Sbjct: 138 MACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGH 197
Query: 204 DEKLGVAIATALIDMYSKCGN-LAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRL 262
E V + +LIDM+ K N A ++F+++++ +VV+WT+MI+ ++ E +R
Sbjct: 198 FES-DVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRF 256
Query: 263 FAEMIEENVFPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGK 322
F +M+ + T+ S+ C + L LGK LH++ +R+G + +LVDMY K
Sbjct: 257 FLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAK 314
Query: 323 CR---EIRSARTLFDGMKSKDVMIWNAVISAYAQ-AHCIDKAFELFIHMKVS-KVRPNEV 377
C + R +FD M+ VM W A+I+ Y + + +A LF M V PN
Sbjct: 315 CSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHF 374
Query: 378 TMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEA 437
T C +GK + K+GL + + +++ M+ K + A R F
Sbjct: 375 TFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL 434
Query: 438 IYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGK 497
+++ +N + G + E+A ++ + + TF LL+ ++ G + +G+
Sbjct: 435 SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE 494
Query: 498 SVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKL 557
+ ++V LGL ++ + + G +D A + M R N+I W +++
Sbjct: 495 QIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR-NVISWTSMITGFAK 552
Query: 558 H 558
H
Sbjct: 553 H 553
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 195/599 (32%), Positives = 314/599 (52%), Gaps = 6/599 (1%)
Query: 36 LTRYNSLVTSYIKNNKPSSALNIYAFMR--KNGSEVDNFTIPTILKACAQVLMTHLGKEI 93
+ + S++ Y+ N AL +++ MR + D + +LKAC Q G+ +
Sbjct: 71 IVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESL 130
Query: 94 HGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLP 153
H +A+K L YV ++L+ MY G + + +F EMP R+ V+W+ +I G G
Sbjct: 131 HAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRY 190
Query: 154 EEALEVMREM-RFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIA 212
+E L EM R ++ + I++ + A + V GKAIH V+ + + +A
Sbjct: 191 KEGLTYFSEMSRSEELSDTYTFAIALKAC-AGLRQVKYGKAIHTHVI--VRGFVTTLCVA 247
Query: 213 TALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVF 272
+L MY++CG + LF +++ VVSWT +I Y R + + V F +M V
Sbjct: 248 NSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVP 307
Query: 273 PSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL 332
P+E T S+ C + L G+ LH +L G SL+++N+++ MY C + SA L
Sbjct: 308 PNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVL 367
Query: 333 FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
F GM+ +D++ W+ +I Y QA ++ F+ F M+ S +P + + LLS+ +
Sbjct: 368 FQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVI 427
Query: 393 EMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY 452
E G+ +H GLE + ++++L++MY+KCG + A +F E DI AM+ GY
Sbjct: 428 EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGY 487
Query: 453 GMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPK 512
HG +EA+ F + G +P+ +TFI +L AC+H+G + G F+ M + P
Sbjct: 488 AEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPA 547
Query: 513 IEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQIL 572
EHYGCMVDLL RAG L +A +MI M + + +VW LL A K + G AA +IL
Sbjct: 548 KEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERIL 607
Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRG 631
E++P V ++NIY+ + A VR+ MK V KEPG+SS+++ V F+ G
Sbjct: 608 ELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSG 666
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 221/439 (50%), Gaps = 14/439 (3%)
Query: 120 GSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD--IRPSEVAMIS 177
G+L +AR +FD+MP+ D+VSW+++I+ Y +EAL + MR +D + P +
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 178 MVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQ 237
++ +++ G+++HA V+ V + ++L+DMY + G + + ++F+ +
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLS--SVYVGSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 238 NSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECGFVGGLQLGKWL 297
+ V+WT +I+G + EG+ F+EM T + C + ++ GK +
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 298 HAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCI 357
H +++ GF +L +AN+L MY +C E++ LF+ M +DV+ W ++I AY +
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQE 291
Query: 358 DKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQGLEVDVILKTAL 417
KA E FI M+ S+V PNE T + S C L G+ LH + GL + + ++
Sbjct: 292 VKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSM 351
Query: 418 VDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNG 477
+ MY+ CG++ A LF RDI W+ ++ GY G GEE +F M +SG KP
Sbjct: 352 MKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTD 411
Query: 478 ITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH----YGCMVDLLGRAGLLDEAH 533
LL+ + ++ G + VH L L +E ++++ + G + EA
Sbjct: 412 FALASLLSVSGNMAVIEGG-----RQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEA- 465
Query: 534 EMIKSMPLRPNMIVWGALL 552
MI R +++ A++
Sbjct: 466 SMIFGETDRDDIVSLTAMI 484
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 346 bits (887), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 209/666 (31%), Positives = 332/666 (49%), Gaps = 115/666 (17%)
Query: 72 FTIPTILKACAQVLMTHLGKE--------IHGFAIKNGLDGDAYVSNALIQMYSECGSLV 123
++ T+L+ C +L + K +H IK+GL Y+ N L+ +YS+ G +
Sbjct: 7 LSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYAL 66
Query: 124 SARYLFDEMP-------------------------------NRDVVSWSTMIRGYHRGGL 152
AR LFDEMP RD VSW+TMI GY G
Sbjct: 67 HARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQ 126
Query: 153 PEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLG---- 208
+A+ VM +M I P++ + ++++ A ++ GK +H+ +V KLG
Sbjct: 127 YHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIV------KLGLRGN 180
Query: 209 VAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIE 268
V+++ +L++MY+KCG+ AK +F+R+ + SW MI+ +++ +++ + F +M E
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 269 ENVF--------------------------------PSEITILSLIIECGFVGGLQLGKW 296
++ P T+ S++ C + L +GK
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 297 LHAYILRNGFEFSLAMANALVDMYGKCREIRSARTL------------------------ 332
+H++I+ GF+ S + NAL+ MY +C + +AR L
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 333 ---------FDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLL 383
F +K +DV+ W A+I Y Q +A LF M RPN T+ +L
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420
Query: 384 SLCTEAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDI 442
S+ + +L GK +H K G V + AL+ MYAK G++ A R F RD
Sbjct: 421 SVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDT 480
Query: 443 CMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDK 502
W +M+ HG EEAL F M G++P+ IT++G+ +AC+HAGLV +G+ FD
Sbjct: 481 VSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDM 540
Query: 503 MVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPS 562
M ++P + HY CMVDL GRAGLL EA E I+ MP+ P+++ WG+LL+A ++HKN
Sbjct: 541 MKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNID 600
Query: 563 MGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVN 622
+G++AA ++L +EP+N G ++N+Y+ +W + A +R+ MK+ RVKKE GFS +EV
Sbjct: 601 LGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVK 660
Query: 623 GLVHKF 628
VH F
Sbjct: 661 HKVHVF 666
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/489 (26%), Positives = 230/489 (47%), Gaps = 78/489 (15%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
+ +++ Y + A+ + M K G E FT+ +L + A GK++H F +
Sbjct: 114 WTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIV 173
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFD---------------------------- 130
K GL G+ VSN+L+ MY++CG + A+++FD
Sbjct: 174 KLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMA 233
Query: 131 ---EMPNRDVVSWSTMIRGYHRGGLPEEALEVMREM-RFMDIRPSEVAMISMVSLFADVA 186
+M RD+V+W++MI G+++ G AL++ +M R + P + S++S A++
Sbjct: 234 QFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLE 293
Query: 187 DVDLGKAIHACVV---------------------------------RNCKDEKLGVAIAT 213
+ +GK IH+ +V R KD L + T
Sbjct: 294 KLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD--LKIEGFT 351
Query: 214 ALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFP 273
AL+D Y K G++ AK +F L VV+WT MI GY + E + LF M+ P
Sbjct: 352 ALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRP 411
Query: 274 SEITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLF 333
+ T+ +++ + L GK +H +++G +S++++NAL+ MY K I SA F
Sbjct: 412 NSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAF 471
Query: 334 DGMK-SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGAL 392
D ++ +D + W ++I A AQ ++A ELF M + +RP+ +T VG+ S CT AG +
Sbjct: 472 DLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLV 531
Query: 393 EMGKWLHTYIEKQGLEVDVILKT-----ALVDMYAKCGDVNGAYRLFSE-AIYRDICMWN 446
G+ ++ +VD I+ T +VD++ + G + A + I D+ W
Sbjct: 532 NQGRQYFDMMK----DVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWG 587
Query: 447 AMMAGYGMH 455
++++ +H
Sbjct: 588 SLLSACRVH 596
Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 94/244 (38%), Gaps = 44/244 (18%)
Query: 374 PNEVTMVGLLSLCT--------EAGALEMGKWLHTYIEKQGLEVDVILKTALVDMYAKCG 425
P +++ LL LCT ++ + +H + K GL V L L+++Y+K G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 426 DVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFV------------------- 466
A +LF E R WN +++ Y G + FF
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 467 ------------DMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIE 514
DM + G++P T +L + + + GK V +V LGL +
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVK-LGLRGNVS 182
Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEI 574
++++ + G A + M +R ++ W A++A LH ++A Q ++
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVR-DISSWNAMIA---LHMQVGQMDLAMAQFEQM 238
Query: 575 EPQN 578
++
Sbjct: 239 AERD 242
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 345 bits (886), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 197/594 (33%), Positives = 315/594 (53%), Gaps = 19/594 (3%)
Query: 46 YIKNNKPSSALNIYAFMRKNGSEV--DNFTIPTILKACAQVLMTHLGKEIHGFAIKNGLD 103
Y +N+ A ++ M ++ S D+ T T+L C + + ++H FA+K G D
Sbjct: 120 YARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFD 179
Query: 104 GDAY--VSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
+ + VSN L++ Y E L A LF+E+P +D V+++T+I GY + GL E++ +
Sbjct: 180 TNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFL 239
Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRN--CKDEKLGVAIATALIDMY 219
+MR +PS+ ++ + D LG+ +HA V +D +G I +D Y
Sbjct: 240 KMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQI----LDFY 295
Query: 220 SKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEM----IEENVFPSE 275
SK + + LF+ + + VS+ V+IS Y + ++ + F EM + FP
Sbjct: 296 SKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPF- 354
Query: 276 ITILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDG 335
T+LS+ + LQ+G+ LH L + L + N+LVDMY KC A +F
Sbjct: 355 ATMLSIAAN---LSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKS 411
Query: 336 MKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG 395
+ + + W A+IS Y Q +LF M+ S +R ++ T +L +L +G
Sbjct: 412 LPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLG 471
Query: 396 KWLHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMH 455
K LH +I + G +V + LVDMYAKCG + A ++F E R+ WNA+++ + +
Sbjct: 472 KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADN 531
Query: 456 GCGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEH 515
G GE A+ F M SG++P+ ++ +G+L ACSH G V +G F M G+ PK +H
Sbjct: 532 GDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKH 591
Query: 516 YGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIE 575
Y CM+DLLGR G EA +++ MP P+ I+W ++L A ++HKN S+ E AA ++ +E
Sbjct: 592 YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSME 651
Query: 576 P-QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKF 628
++ V MSNIYA A W V V++ M+E +KK P +S VEVN +H F
Sbjct: 652 KLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVF 705
Score = 216 bits (551), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 123/419 (29%), Positives = 222/419 (52%), Gaps = 4/419 (0%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
+N+L+T Y K+ + +++++ MR++G + +FT +LKA + LG+++H ++
Sbjct: 218 FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSV 277
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
G DA V N ++ YS+ ++ R LFDEMP D VS++ +I Y + E +L
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLH 337
Query: 159 VMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDM 218
REM+ M +M+S+ A+++ + +G+ +H + D L V +L+DM
Sbjct: 338 FFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV--GNSLVDM 395
Query: 219 YSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITI 278
Y+KC A+ +F L Q + VSWT +ISGY++ G++LF +M N+ + T
Sbjct: 396 YAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTF 455
Query: 279 LSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKS 338
+++ L LGK LHA+I+R+G ++ + LVDMY KC I+ A +F+ M
Sbjct: 456 ATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPD 515
Query: 339 KDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMG-KW 397
++ + WNA+ISA+A + A F M S ++P+ V+++G+L+ C+ G +E G ++
Sbjct: 516 RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEY 575
Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYR-DICMWNAMMAGYGMH 455
G+ ++D+ + G A +L E + D MW++++ +H
Sbjct: 576 FQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIH 634
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 215/468 (45%), Gaps = 21/468 (4%)
Query: 109 SNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMREMRFMD- 167
+N +I + + G + SAR LFD MP+R VV+W+ ++ Y R +EA ++ R+M
Sbjct: 82 TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141
Query: 168 -IRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSKCGNLA 226
P V +++ D + +HA V+ D + ++ L+ Y + L
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD 201
Query: 227 YAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILSLIIECG 286
A LF + + V++ +I+GY + E + LF +M + PS+ T ++
Sbjct: 202 LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261
Query: 287 FVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKDVMIWNA 346
+ LG+ LHA + GF ++ N ++D Y K + R LFD M D + +N
Sbjct: 262 GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNV 321
Query: 347 VISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEKQG 406
VIS+Y+QA + + F M+ +LS+ +L+MG+ LH Q
Sbjct: 322 VISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHC----QA 377
Query: 407 L--EVDVILK--TALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGY---GMHGCGE 459
L D IL +LVDMYAKC A +F R W A+++GY G+HG G
Sbjct: 378 LLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG- 436
Query: 460 EALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHYGCM 519
L F M S ++ + TF +L A + + GK + ++ L G +
Sbjct: 437 --LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSG-L 493
Query: 520 VDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIA 567
VD+ + G + +A ++ + MP R N + W AL++A H + GE A
Sbjct: 494 VDMYAKCGSIKDAVQVFEEMPDR-NAVSWNALISA---HADNGDGEAA 537
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Query: 410 DVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDME 469
+ + ++ + K GDV+ A LF R + W +M Y + +EA F M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 470 RSG--VKPNGITFIGLLNACSHA 490
RS P+ +TF LL C+ A
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDA 160
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 341 bits (875), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 185/563 (32%), Positives = 317/563 (56%), Gaps = 11/563 (1%)
Query: 76 TILKACAQVLMTHLGKEIHGFAIKNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR 135
+IL+ C + ++ G ++H + +K+G + SN LI MY +C + A +FD MP R
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 136 DVVSWSTMIRGYHRGGLPEEALEVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIH 195
+VVSWS ++ G+ G + +L + EM I P+E + + + ++ G IH
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 196 ACVVRNCKDEKLGVAIATALIDMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNE 255
++ ++ V + +L+DMYSKCG + A+++F R+ S++SW MI+G++
Sbjct: 131 GFCLK--IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 256 INEGVRLFAEMIEENV--FPSEITILSLIIECGFVGGLQLGKWLHAYILRNGFEF--SLA 311
++ + F M E N+ P E T+ SL+ C G + GK +H +++R+GF S
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 312 MANALVDMYGKCREIRSARTLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSK 371
+ +LVD+Y KC + SAR FD +K K ++ W+++I YAQ +A LF ++
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308
Query: 372 VRPNEVTMVGLLSLCTEAGALEMGKWLHTYIEK--QGLEVDVILKTALVDMYAKCGDVNG 429
+ + + ++ + + L GK + K GLE V+ ++VDMY KCG V+
Sbjct: 309 SQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVVDMYLKCGLVDE 366
Query: 430 AYRLFSEAIYRDICMWNAMMAGYGMHGCGEEALIFFVDMERSGVKPNGITFIGLLNACSH 489
A + F+E +D+ W ++ GYG HG G++++ F +M R ++P+ + ++ +L+ACSH
Sbjct: 367 AEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSH 426
Query: 490 AGLVTEGKSVFDKMVHGLGLVPKIEHYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWG 549
+G++ EG+ +F K++ G+ P++EHY C+VDLLGRAG L EA +I +MP++PN+ +W
Sbjct: 427 SGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQ 486
Query: 550 ALLAASKLHKNPSMGEIAATQILEIEPQNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIR 609
LL+ ++H + +G+ +L I+ +N V+MSN+Y A WN+ R +
Sbjct: 487 TLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKG 546
Query: 610 VKKEPGFSSVEVNGLVHKFIRGG 632
+KKE G S VE+ VH F R G
Sbjct: 547 LKKEAGMSWVEIEREVH-FFRSG 568
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 216/422 (51%), Gaps = 4/422 (0%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
+++L++ ++ N +L++++ M + G + FT T LKAC + G +IHGF +
Sbjct: 75 WSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCL 134
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALE 158
K G + V N+L+ MYS+CG + A +F + +R ++SW+ MI G+ G +AL+
Sbjct: 135 KIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALD 194
Query: 159 VMREMRFMDI--RPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALI 216
M+ +I RP E + S++ + + GK IH +VR+ I +L+
Sbjct: 195 TFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLV 254
Query: 217 DMYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEI 276
D+Y KCG L A++ F+++ + +++SW+ +I GY + E E + LF + E N
Sbjct: 255 DLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSF 314
Query: 277 TILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGM 336
+ S+I L+ GK + A ++ ++ N++VDMY KC + A F M
Sbjct: 315 ALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEM 374
Query: 337 KSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGK 396
+ KDV+ W VI+ Y + K+ +F M + P+EV + +LS C+ +G ++ G+
Sbjct: 375 QLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGE 434
Query: 397 WLHT-YIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSE-AIYRDICMWNAMMAGYGM 454
L + +E G++ V +VD+ + G + A L I ++ +W +++ +
Sbjct: 435 ELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRV 494
Query: 455 HG 456
HG
Sbjct: 495 HG 496
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 181/365 (49%), Gaps = 15/365 (4%)
Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMK 337
++S++ C G G +H Y+L++G +L +N L+DMY KCRE A +FD M
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 338 SKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKW 397
++V+ W+A++S + + + LF M + PNE T L C ALE G
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 398 LHTYIEKQGLEVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHGC 457
+H + K G E+ V + +LVDMY+KCG +N A ++F + R + WNAM+AG+ G
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGY 188
Query: 458 GEEALIFFVDMERSGVK--PNGITFIGLLNACSHAGLVTEGKSVFDKMVH-GLGLVPKIE 514
G +AL F M+ + +K P+ T LL ACS G++ GK + +V G
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 515 HYGCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLA--ASKLHKNPSMGEIAATQIL 572
G +VDL + G L A + + MI W +L+ A + +MG Q L
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307
Query: 573 EIEPQNYGYNVLMSNIYAVANRWNDVAGVR--RVMKEIRVKKEPGFSSVEVNGLVHKFIR 630
+ ++ +S+I V + D A +R + M+ + VK G + +N +V +++
Sbjct: 308 NSQIDSFA----LSSIIGV---FADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLK 360
Query: 631 GGMVN 635
G+V+
Sbjct: 361 CGLVD 365
>sp|Q9LUC2|PP231_ARATH Pentatricopeptide repeat-containing protein At3g14730
OS=Arabidopsis thaliana GN=PCMP-E31 PE=2 SV=1
Length = 653
Score = 341 bits (874), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 194/599 (32%), Positives = 324/599 (54%), Gaps = 18/599 (3%)
Query: 51 KPSSAL-----NIYAFMRKNGSEVDNFTIPT---ILKACAQVLMTHLGKEIHGFAIKNG- 101
KPSSAL + + +N ++ + T L+ CAQ G++IHGF ++ G
Sbjct: 32 KPSSALASLYSTVSGQIEENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGF 91
Query: 102 LDGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGGLPEEALEVMR 161
LD +L+ MY++CG + A +F RDV ++ +I G+ G P +A+E R
Sbjct: 92 LDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYR 150
Query: 162 EMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALIDMYSK 221
EMR I P + S++ +D ++ K +H + D + + L+ YSK
Sbjct: 151 EMRANGILPDKYTFPSLLK-GSDAMELSDVKKVHGLAFKLGFDSD--CYVGSGLVTSYSK 207
Query: 222 CGNLAYAKQLFNRL-NQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEITILS 280
++ A+++F+ L +++ V W +++GY + + + +F++M EE V S TI S
Sbjct: 208 FMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITS 267
Query: 281 LIIECGFVGGLQLGKWLHAYILRNGFEFSLAMANALVDMYGKCREIRSARTLFDGMKSKD 340
++ G + G+ +H ++ G + ++NAL+DMYGK + + A ++F+ M +D
Sbjct: 268 VLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERD 327
Query: 341 VMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAGALEMGKWLHT 400
+ WN+V+ + D LF M S +RP+ VT+ +L C +L G+ +H
Sbjct: 328 LFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHG 387
Query: 401 YIEKQGL----EVDVILKTALVDMYAKCGDVNGAYRLFSEAIYRDICMWNAMMAGYGMHG 456
Y+ GL + + +L+DMY KCGD+ A +F +D WN M+ GYG+
Sbjct: 388 YMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQS 447
Query: 457 CGEEALIFFVDMERSGVKPNGITFIGLLNACSHAGLVTEGKSVFDKMVHGLGLVPKIEHY 516
CGE AL F M R+GVKP+ ITF+GLL ACSH+G + EG++ +M ++P +HY
Sbjct: 448 CGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHY 507
Query: 517 GCMVDLLGRAGLLDEAHEMIKSMPLRPNMIVWGALLAASKLHKNPSMGEIAATQILEIEP 576
C++D+LGRA L+EA+E+ S P+ N +VW ++L++ +LH N + +A ++ E+EP
Sbjct: 508 ACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEP 567
Query: 577 QNYGYNVLMSNIYAVANRWNDVAGVRRVMKEIRVKKEPGFSSVEVNGLVHKFIRGGMVN 635
++ G VLMSN+Y A ++ +V VR M++ VKK PG S + + VH F G +
Sbjct: 568 EHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTH 626
Score = 228 bits (582), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 237/442 (53%), Gaps = 30/442 (6%)
Query: 39 YNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHGFAI 98
YN+L++ ++ N P A+ Y MR NG D +T P++LK + ++ + K++HG A
Sbjct: 129 YNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHGLAF 187
Query: 99 KNGLDGDAYVSNALIQMYSECGSLVSARYLFDEMPNR-DVVSWSTMIRGYHRGGLPEEAL 157
K G D D YV + L+ YS+ S+ A+ +FDE+P+R D V W+ ++ GY + E+AL
Sbjct: 188 KLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDAL 247
Query: 158 EVMREMRFMDIRPSEVAMISMVSLFADVADVDLGKAIHACVVRNCKDEKLGVAIATALID 217
V +MR + S + S++S F D+D G++IH V+ + ++ ALID
Sbjct: 248 LVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSD--IVVSNALID 305
Query: 218 MYSKCGNLAYAKQLFNRLNQNSVVSWTVMISGYIRCNEINEGVRLFAEMIEENVFPSEIT 277
MY K L A +F +++ + +W ++ + C + + + LF M+ + P +T
Sbjct: 306 MYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVT 365
Query: 278 ILSLIIECGFVGGLQLGKWLHAYILRNGF-------EFSLAMANALVDMYGKCREIRSAR 330
+ +++ CG + L+ G+ +H Y++ +G EF + N+L+DMY KC ++R AR
Sbjct: 366 LTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEF---IHNSLMDMYVKCGDLRDAR 422
Query: 331 TLFDGMKSKDVMIWNAVISAYAQAHCIDKAFELFIHMKVSKVRPNEVTMVGLLSLCTEAG 390
+FD M+ KD WN +I+ Y C + A ++F M + V+P+E+T VGLL C+ +G
Sbjct: 423 MVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSG 482
Query: 391 ALEMGKWLHTYIEKQGLEVDVILKTA-----LVDMYAKCGDVNGAYRLFSEAIYRDIC-- 443
L G+ +E V IL T+ ++DM + + AY L AI + IC
Sbjct: 483 FLNEGRNFLAQMET----VYNILPTSDHYACVIDMLGRADKLEEAYEL---AISKPICDN 535
Query: 444 --MWNAMMAGYGMHGCGEEALI 463
+W ++++ +HG + AL+
Sbjct: 536 PVVWRSILSSCRLHGNKDLALV 557
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 4/148 (2%)
Query: 36 LTRYNSLVTSYIKNNKPSSALNIYAFMRKNGSEVDNFTIPTILKACAQVLMTHLGKEIHG 95
L +NS++ + L ++ M +G D T+ T+L C ++ G+EIHG
Sbjct: 328 LFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHG 387
Query: 96 FAIKNGL----DGDAYVSNALIQMYSECGSLVSARYLFDEMPNRDVVSWSTMIRGYHRGG 151
+ I +GL + ++ N+L+ MY +CG L AR +FD M +D SW+ MI GY
Sbjct: 388 YMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQS 447
Query: 152 LPEEALEVMREMRFMDIRPSEVAMISMV 179
E AL++ M ++P E+ + ++
Sbjct: 448 CGELALDMFSCMCRAGVKPDEITFVGLL 475
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 229,485,323
Number of Sequences: 539616
Number of extensions: 9416978
Number of successful extensions: 28932
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 375
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 19888
Number of HSP's gapped (non-prelim): 2340
length of query: 638
length of database: 191,569,459
effective HSP length: 124
effective length of query: 514
effective length of database: 124,657,075
effective search space: 64073736550
effective search space used: 64073736550
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)