Query 006628
Match_columns 638
No_of_seqs 151 out of 572
Neff 5.2
Searched_HMMs 46136
Date Thu Mar 28 12:10:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006628.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006628hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1172 Na+-independent Cl/HCO 100.0 2E-165 4E-170 1387.4 37.2 522 2-568 330-868 (876)
2 TIGR00834 ae anion exchange pr 100.0 3E-157 6E-162 1349.3 35.0 510 2-559 339-882 (900)
3 PF00955 HCO3_cotransp: HCO3- 100.0 6E-143 1E-147 1178.7 0.7 457 1-505 2-510 (510)
4 COG0659 SUL1 Sulfate permease 99.4 4.6E-11 9.9E-16 135.4 23.3 327 45-462 32-365 (554)
5 TIGR00815 sulP high affinity s 99.2 9.5E-10 2.1E-14 124.9 22.5 328 48-462 28-375 (563)
6 PRK11660 putative transporter; 99.2 1.8E-09 3.8E-14 122.9 20.4 327 48-460 43-394 (568)
7 KOG0236 Sulfate/bicarbonate/ox 98.2 0.00018 3.9E-09 84.0 23.4 328 49-457 95-439 (665)
8 TIGR03173 pbuX xanthine permea 98.1 0.00011 2.4E-09 80.6 18.8 317 40-454 5-332 (406)
9 PF00916 Sulfate_transp: Sulfa 98.1 1.4E-05 3.1E-10 82.4 10.5 257 142-468 4-269 (280)
10 TIGR00801 ncs2 uracil-xanthine 98.1 0.00024 5.3E-09 78.4 19.6 320 40-455 15-349 (415)
11 PRK11412 putative uracil/xanth 97.8 0.0028 6E-08 70.8 21.8 332 40-462 18-363 (433)
12 TIGR03616 RutG pyrimidine util 97.5 0.0071 1.5E-07 67.4 20.4 121 39-174 39-165 (429)
13 PRK10720 uracil transporter; P 97.3 0.023 4.9E-07 63.4 20.5 318 40-466 24-352 (428)
14 PF00860 Xan_ur_permease: Perm 97.3 0.01 2.3E-07 64.9 17.1 332 41-465 12-358 (389)
15 COG2233 UraA Xanthine/uracil p 95.6 0.81 1.8E-05 51.6 18.8 339 39-470 25-376 (451)
16 PF13792 Sulfate_tra_GLY: Sulf 50.7 9.7 0.00021 33.5 1.7 49 48-102 30-79 (84)
17 KOG0828 Predicted E3 ubiquitin 40.4 2.2E+02 0.0049 33.0 10.6 218 77-348 267-531 (636)
18 KOG3817 Uncharacterized conser 35.0 31 0.00068 38.2 2.9 63 497-560 253-324 (452)
19 PF12075 KN_motif: KN motif; 28.0 24 0.00052 27.1 0.4 18 325-342 3-20 (39)
20 PF13172 PepSY_TM_1: PepSY-ass 27.7 82 0.0018 22.8 3.2 25 121-145 5-29 (34)
21 KOG1292 Xanthine/uracil transp 24.1 1.2E+03 0.026 27.3 20.1 185 230-466 199-401 (510)
No 1
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-165 Score=1387.43 Aligned_cols=522 Identities=42% Similarity=0.715 Sum_probs=487.1
Q ss_pred CCCCCCccchHhhhhhcccccccccccccccCccccchhHHHHhhcchhhhhhhhccccccCCCcchhHHHHhhhHHHHH
Q 006628 2 ENIKSPFRGIANDVRGRVSCYKEDWISGISSGFGILAPTTYIFFASALPVVAFGEQLSRDTDGSLSTVETLASTALCGII 81 (638)
Q Consensus 2 ~~t~~pf~Gi~~DikrR~p~Y~SDw~Dg~~~~~~~laat~fifFA~l~PaIaFG~ll~~~T~g~igv~E~L~stai~Gii 81 (638)
.+++++|||+++|+|||+|||+|||+||+| .||+|+++||||||++||||||++|+++|+|.+||+|+|+|||+||++
T Consensus 330 ~~tgrlFgGl~~DikrR~p~Y~SD~~Da~~--~~~la~~lfiYfa~l~P~ItFG~ll~~~Tdg~~~v~E~L~stal~Gii 407 (876)
T KOG1172|consen 330 QRTGRLFGGLVLDIKRRLPHYKSDFRDAFN--IQCLAATLFIYFACLLPAITFGGLLGEATDGLIGVVETLLSTALCGII 407 (876)
T ss_pred ccccccchhHHHHHHhhcCCChHHHHHHhc--cccchHHHHHHHHhhhhHhhHHHHhhhhccchHHHHHHHHHHHHHHHH
Confidence 378999999999999999999999999999 599999999999999999999999999999999999999999999999
Q ss_pred HHHhcCcceeeeeccchHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHHHHHHHHHhcchhhhcccccchhHHHH
Q 006628 82 HSIVGGQPLLILGVAEPTVIMYTYLYNFAKDREDLGQKLYLAWAGWVCVWTALMLFLLAVFNAGDLINRFTRIAGELFGM 161 (638)
Q Consensus 82 fslf~GQPL~IlG~TGP~~if~~~ly~~~~~~~~~g~~~fL~~~~WVgiWta~~l~lla~~nas~li~~~TRfTeEiF~~ 161 (638)
||+||||||+|+|+|||++|||+++|+||++++ .+||+||+|||+|++++|+++|++|||.+|+|+||||||+||+
T Consensus 408 fslfggQPLlIlg~TgP~lVfe~~lf~f~~~~~----~dyl~~r~wVglW~~~l~illaa~~as~lv~~~TRfteEiF~~ 483 (876)
T KOG1172|consen 408 FSLFGGQPLLILGVTGPLLVFEKALFKFCKDNG----LDYLAFRAWVGLWTAFLLILLAATNASSLVKYITRFTEEIFGL 483 (876)
T ss_pred HHHhcCCceEEEecCccHHHHHHHHHHHHhhCC----CchhhHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhHHHHHHH
Confidence 999999999999999999999999999999997 6899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhccccCCC-----------------CCCCcccchhhhcchhhHHHHHHHHHHHHHHHhhhccccc
Q 006628 162 LIAVLFIQQAIKGMVTEFKIPKD-----------------EDSNLDKYQFQWLYTNGLLGIIFTFGLVYTALKSRKARFW 224 (638)
Q Consensus 162 lIsviFi~eaik~l~~~F~~p~~-----------------~~~~~~~~~~~~~~~~~llsliL~~gt~~~a~~l~~~r~s 224 (638)
|||+|||||||++++++|+.... ++...++++..|.++|+++|+++++||+++|+++|+||+|
T Consensus 484 LIs~iFi~eai~kl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~llslil~~gt~~~a~~lr~fr~s 563 (876)
T KOG1172|consen 484 LISLIFIYEAIKKLIKIFKGLPIEFDSKPNPGADWSGPECESVSGTLLGSSCRPDTALLSLILMFGTLFLALTLRKFKSS 563 (876)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcccccccCCcccccccccccccCcccCCCcCCcchHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999998865321 2223445677788999999999999999999999999999
Q ss_pred cccccccchhhccchhhHHHHHHhhhccccCccCCCCCcccccCCCCCCCCCCccceeeccCCCcchHHHHHHHHHHHHh
Q 006628 225 WYGTGWLRSFVADYGVPLMVVVWTALSFSVPSKVPSGVPRRLFSPLPWESGSLEHWSVMKDMGKVPLAYIFAAFIPAVMI 304 (638)
Q Consensus 225 ~y~~~~~R~~iaDfgvpiaV~~~t~~~y~~~~~vp~~~~~rl~~p~~~~~~~~r~W~V~~~~~~vp~~~i~~A~iPA~ll 304 (638)
+||++|+|++|+|||+|+||++|++++|+.+...+.+++.+...|.+|.+. |+|+|+ +++++|+|++++|++||+++
T Consensus 564 ~yf~~~~R~~isDfgvpisIl~~s~i~~~~~~~~~~kl~vp~~~~~t~~~~--rgw~v~-~~~~~P~~~~~~A~ipalll 640 (876)
T KOG1172|consen 564 RYFPRKVRSLISDFGVPLSILVFSLIDYFGGSVETPKLPVPSVFPPTWPFD--RGWFVP-PFGKNPWWYVFAALIPALLL 640 (876)
T ss_pred CccchHHHHHHHhhhhHHHHHHHHHHHhhccccCCCccccCcCCCCCCccc--CCeeeC-CCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998754444566666677777443 999975 55699999999999999999
Q ss_pred hhheeechhhHHHHhhcccccCCCCCccchhhHHHHHHHhhhhhcCCCCCCCCCCCCccchhhhhHHHhhchhhhhHHHH
Q 006628 305 AGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKRQTSEVKELEDL 384 (638)
Q Consensus 305 ~iL~F~D~nIts~i~n~~e~kLkKgsgyH~DLlllgi~t~icsllGLPw~~ga~pqSp~H~~SL~v~~~~~~~~~~~~~~ 384 (638)
+||||||||||++|+||||||||||+||||||+++|++|++||+|||||+|||+||||+|++||+++++.
T Consensus 641 ~iLiFmDqqIts~iv~rke~kLKKgsgyH~DLlllgil~~icsllGLPw~~~a~p~S~~H~~SL~v~~~~---------- 710 (876)
T KOG1172|consen 641 TILIFMDQQITAVIVNRKENKLKKGSGYHLDLLLLGILTLICSLLGLPWSNAATVQSPMHTKSLAVESET---------- 710 (876)
T ss_pred HHHHHhcchHHHHHhhcccccCCCCcchhHHHHHHHHHHHHHHhcCCCccccccccCHHHHHHHHHhhcc----------
Confidence 9999999999999999999999999999999999999999999999999999999999999999998653
Q ss_pred HHHHhhccccCCcCcCcCCCcccccccccceeeeecchhhHHHHHHHHHhhhccccCcccchhhhhhhHhhhcccCCcch
Q 006628 385 KEVIMKGEKEGEKSKEKFDPEKHIDAYLPVRVNEQRVSNLLQSLLVAASVCAMPAIKLIPTSVLWGYFAYMAIDSLPGNQ 464 (638)
Q Consensus 385 k~~~~~~~~~~g~~~~~fd~e~~i~~~~~v~V~EQRvS~ll~~lLig~sl~~~PvL~~IP~~VL~GvFlYMGi~SL~Gnq 464 (638)
+++|+.+ .+++|+||||||++|++|||+|++++|+|++||+|||||+|+|||++||+|||
T Consensus 711 --------~apge~~------------~i~~V~EQRvtgll~~llvgls~~~~pvL~~IP~~VL~GvFlYMgv~SL~Gnq 770 (876)
T KOG1172|consen 711 --------SAPGEQP------------QIVGVREQRVTGLLQFLLVGLSVLLLPVLKLIPMPVLYGVFLYMGVSSLPGNQ 770 (876)
T ss_pred --------cCCCCcc------------ccccchhhhhHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHhhccCCccH
Confidence 2355432 35899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCcccccCCCcccccccCcceehhhHHHHHHHhhhheeeecchhhHhhhHHHHHHHHHHhhhhcCCC
Q 006628 465 FWERMLLLFITPGRQYKVLEKDHASFVELVPYKYIVIFTLFQFVYFLVCYGVTWIPVAGILFPVPFFLLISIRQHILPKL 544 (638)
Q Consensus 465 ~~eRi~llf~~~~~~~~~~~~~~~~yvr~Vp~~~ihlFT~iQl~~l~~~~~v~~~~~aai~FPl~i~lLIpiR~~llpr~ 544 (638)
||||++|+|||+||+ |+.+|+||||+||||+||++|++||++||+++|+|+|+|+||++++++||+|+++|||+
T Consensus 771 f~eRl~Llf~p~k~~------p~~~ylrhv~~r~vhlFT~~Ql~~l~ll~~i~~~~~asi~FP~~ll~lVpiR~~~lp~~ 844 (876)
T KOG1172|consen 771 FFERLLLLFMPPKHR------PDTLYLRHVPFRRVHLFTLIQLLCLALLWAIKWSPVASIIFPLMLLLLVPIRQYLLPRL 844 (876)
T ss_pred HHHHHHHHcCCcccC------CCccceeecchhhHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHhHHhh
Confidence 999999999999875 57789999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhhcccChhhhcccccCCCCC
Q 006628 545 FPPHHLQELDAAEYDEISGAPWRS 568 (638)
Q Consensus 545 F~~~eL~~LD~~e~ee~~~~~~~~ 568 (638)
|+++||++||++|+|+++.+++..
T Consensus 845 f~~~eL~~LD~~~~~~~~~~~~~~ 868 (876)
T KOG1172|consen 845 FKPRELQALDANEYEPEPDKPKGE 868 (876)
T ss_pred cCHHhhhhhchhhccccccccccc
Confidence 999999999999999999888543
No 2
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=100.00 E-value=2.6e-157 Score=1349.28 Aligned_cols=510 Identities=27% Similarity=0.503 Sum_probs=469.1
Q ss_pred CCCCCCccchHhhhhhcccccccccccccccCccccchhHHHHhhcchhhhhhhhccccccCCCcchhHHHHhhhHHHHH
Q 006628 2 ENIKSPFRGIANDVRGRVSCYKEDWISGISSGFGILAPTTYIFFASALPVVAFGEQLSRDTDGSLSTVETLASTALCGII 81 (638)
Q Consensus 2 ~~t~~pf~Gi~~DikrR~p~Y~SDw~Dg~~~~~~~laat~fifFA~l~PaIaFG~ll~~~T~g~igv~E~L~stai~Gii 81 (638)
++|++|||||++|+|||+|||+|||||||| .||+||++||||||++||||||++|+++|+|.|||+|+|+|||+||++
T Consensus 339 ~rtg~~f~Gli~DikRR~p~Y~SD~tDa~~--~q~laa~ifiyFA~L~PaIaFG~ll~~~T~g~~gv~E~Llstai~Gii 416 (900)
T TIGR00834 339 QRTGRPFGGLIRDIKRRYPHYLSDFTDALN--PQCLAAVIFIYFAALSPAITFGGLLGEKTRNMMGVSELLISTAVQGVL 416 (900)
T ss_pred hhcCCccchHHHHHHhhcccchHHHhhhhc--chhHHHHHHHHHHHhhHHhhHHHHHHHhhCCcchHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999 699999999999999999999999999999999999999999999999
Q ss_pred HHHhcCcceeeeeccchHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHHHHHHHHHhcchhhhcccccchhHHHH
Q 006628 82 HSIVGGQPLLILGVAEPTVIMYTYLYNFAKDREDLGQKLYLAWAGWVCVWTALMLFLLAVFNAGDLINRFTRIAGELFGM 161 (638)
Q Consensus 82 fslf~GQPL~IlG~TGP~~if~~~ly~~~~~~~~~g~~~fL~~~~WVgiWta~~l~lla~~nas~li~~~TRfTeEiF~~ 161 (638)
||+||||||+|+|+|||+++|++++|+||++++ .+|++||+|||+|+++||+++|++|+|++|||+||||||+||+
T Consensus 417 fslf~GQPL~IlG~TGPilvF~~~ly~~c~~~~----~~yl~~~~WigiW~~~~~~lla~~~~s~lvryiTRFTeEiFa~ 492 (900)
T TIGR00834 417 FALLAAQPLLVVGFSGPLLVFEEAFFSFCESNG----LEYLVGRVWIGLWLVLLVLLLVATEGSFLVRYISRFTQEIFSF 492 (900)
T ss_pred HhhhcCCceEEecCcccHHHHHHHHHHHHhhcC----CchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhHHHHHHH
Confidence 999999999999999999999999999999886 6899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhccccCCC--------------CCCC---------------cccchhhhcchhhHHHHHHHHHHH
Q 006628 162 LIAVLFIQQAIKGMVTEFKIPKD--------------EDSN---------------LDKYQFQWLYTNGLLGIIFTFGLV 212 (638)
Q Consensus 162 lIsviFi~eaik~l~~~F~~p~~--------------~~~~---------------~~~~~~~~~~~~~llsliL~~gt~ 212 (638)
|||+||||||+++++++|+.+.. .|++ ....++.+..+++++|++|++||+
T Consensus 493 lIs~IFI~eai~~L~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~llsliL~lgTf 572 (900)
T TIGR00834 493 LISLIFIYETFSKLIKIFQEHPLQVFYNTLFCVPPKPQGPSVSALLEKDCSKLGGTLGGNNCRFQPNTALLSLVLMLGTF 572 (900)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHH
Confidence 99999999999999999975321 0000 001123345788999999999999
Q ss_pred HHHHhhhccccccccccccchhhccchhhHHHHHHhhhccccCccCCCCCcccccCCCCCCCCCC--ccceeeccCCCc-
Q 006628 213 YTALKSRKARFWWYGTGWLRSFVADYGVPLMVVVWTALSFSVPSKVPSGVPRRLFSPLPWESGSL--EHWSVMKDMGKV- 289 (638)
Q Consensus 213 ~~a~~l~~~r~s~y~~~~~R~~iaDfgvpiaV~~~t~~~y~~~~~vp~~~~~rl~~p~~~~~~~~--r~W~V~~~~~~v- 289 (638)
++|+++++||+|+||++++|++|+|||+||||++|++++|.++ +++ .+++.+|..+.|++. |+|+| .+++..
T Consensus 573 ~~a~~L~~fk~s~yf~~~vR~~isDfgv~iaI~~~t~v~~~~~-~v~---~~kl~Vp~~f~pt~p~~R~W~i-~p~~~~~ 647 (900)
T TIGR00834 573 FLAMFLRKFKNSRYFPGKARRLIGDFGVPISILIMVLVDIFIG-DTY---TQKLSVPSGLKVTNPSARGWFI-PPLGENR 647 (900)
T ss_pred HHHHHHHHhCCCCcCCchhhhhhhhhhHHHHHHHHHHHHHHhc-cCc---ccccCCCCCcCCCCCCCCCeEE-ccccccc
Confidence 9999999999999999999999999999999999999999764 333 235777877877765 89996 566655
Q ss_pred --chHHHHHHHHHHHHhhhheeechhhHHHHhhcccccCCCCCccchhhHHHHHHHhhhhhcCCCCCCCCCCCCccchhh
Q 006628 290 --PLAYIFAAFIPAVMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKS 367 (638)
Q Consensus 290 --p~~~i~~A~iPA~ll~iL~F~D~nIts~i~n~~e~kLkKgsgyH~DLlllgi~t~icsllGLPw~~ga~pqSp~H~~S 367 (638)
|+|++++|++||+++++|||||||||++|+|+||||||||+||||||+++|++|++||+|||||+|||+||||+|++|
T Consensus 648 ~~p~w~~~~A~iPAlll~ILiFmD~nIts~iv~~~e~kLkKgsgyH~Dllllg~~~~v~sllGLPw~~aatv~S~~Hv~s 727 (900)
T TIGR00834 648 PFPWWMMFAAALPALLVFILIFMEQQITTLIVSKKERKLKKGSGFHLDLLLVVGMGGVAALFGLPWLSAATVRSVTHANA 727 (900)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCccccCCCCcccchHHHHHHHHHHHHHhcCCCcccccCCcChhhHhH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHhhchhhhhHHHHHHHHhhccccCCcCcCcCCCcccccccccceeeeecchhhHHHHHHHHHhhhccccCcccchh
Q 006628 368 LAVLKRQTSEVKELEDLKEVIMKGEKEGEKSKEKFDPEKHIDAYLPVRVNEQRVSNLLQSLLVAASVCAMPAIKLIPTSV 447 (638)
Q Consensus 368 L~v~~~~~~~~~~~~~~k~~~~~~~~~~g~~~~~fd~e~~i~~~~~v~V~EQRvS~ll~~lLig~sl~~~PvL~~IP~~V 447 (638)
|+++++. +++|++++ +++|+||||||+++|+|||+|+++.|+|++||+||
T Consensus 728 L~v~~~~------------------~~~Ge~~~------------i~~V~EQRvT~ll~~lLiglsv~~~PvL~~IP~aV 777 (900)
T TIGR00834 728 LTVMSKA------------------SAPGEKAQ------------IQEVREQRVTGLLVAVLVGLSILMEPILKRIPLAV 777 (900)
T ss_pred Heeeeec------------------cCCCCCCc------------cceeEeeehHHHHHHHHHHHHHHHHHHHhhccHHH
Confidence 9987653 24565321 37999999999999999999999999999999999
Q ss_pred hhhhhHhhhcccCCcchHHHHHHHhhcCCCCCcccccCCCcccccccCcceehhhHHHHHHHhhhheeeecchhhHhhhH
Q 006628 448 LWGYFAYMAIDSLPGNQFWERMLLLFITPGRQYKVLEKDHASFVELVPYKYIVIFTLFQFVYFLVCYGVTWIPVAGILFP 527 (638)
Q Consensus 448 L~GvFlYMGi~SL~Gnq~~eRi~llf~~~~~~~~~~~~~~~~yvr~Vp~~~ihlFT~iQl~~l~~~~~v~~~~~aai~FP 527 (638)
|||+|+|||++||+|||||+|++++|||+|++ ||.+|+|+||+||||+||++|++|++++|++++. +++|+||
T Consensus 778 L~GvFlYMGv~SL~GnQ~~~Ri~llf~p~k~~------P~~~ylr~Vp~~kihlFT~iQl~cl~~l~~ik~t-~aai~FP 850 (900)
T TIGR00834 778 LFGIFLYMGVTSLSGIQLFDRLLLLLMPPKYH------PDVPYVRRVKTWRMHLFTAIQILCLALLWVVKST-PASLAFP 850 (900)
T ss_pred HHHHHHHHHHhhcccCHHHHHHHHHhcCcccC------CCchhhhcCChhHHHHHHHHHHHHHHHHHHHHHH-hHHHHhH
Confidence 99999999999999999999999999999864 6779999999999999999999999999999984 6899999
Q ss_pred HHHHHHHHHhhhhcCCCCChhhhcccChhhhc
Q 006628 528 VPFFLLISIRQHILPKLFPPHHLQELDAAEYD 559 (638)
Q Consensus 528 l~i~lLIpiR~~llpr~F~~~eL~~LD~~e~e 559 (638)
++|++|||+|++++||+|+++||++||++|.|
T Consensus 851 ~~iillVpiR~~llp~~F~~~eL~~LD~~d~~ 882 (900)
T TIGR00834 851 FVLILTVPLRRLLLPRLFTERELKCLDKEDAK 882 (900)
T ss_pred HHHHHHHHHHHHHHhhcCCHHHHhhhCccccc
Confidence 99999999999999999999999999988775
No 3
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=100.00 E-value=6.1e-143 Score=1178.69 Aligned_cols=457 Identities=38% Similarity=0.693 Sum_probs=67.2
Q ss_pred CCCCCCCccchHhhhhhcccccccccccccccCccccchhHHHHhhcchhhhhhhhccccccCCCcchhHHHHhhhHHHH
Q 006628 1 MENIKSPFRGIANDVRGRVSCYKEDWISGISSGFGILAPTTYIFFASALPVVAFGEQLSRDTDGSLSTVETLASTALCGI 80 (638)
Q Consensus 1 ~~~t~~pf~Gi~~DikrR~p~Y~SDw~Dg~~~~~~~laat~fifFA~l~PaIaFG~ll~~~T~g~igv~E~L~stai~Gi 80 (638)
++|||+|||||++|+|||+|+|+|||+||+| .||+++++||||||++||||||++|+++|+|.+|++|+|+|||+||+
T Consensus 2 l~rtg~~fgGl~~Dikrr~p~Y~SD~~D~~~--~~~~~~~~flyfa~l~PaItFG~ll~~~T~~~~gv~e~l~~~~i~Gi 79 (510)
T PF00955_consen 2 LQRTGRLFGGLINDIKRRLPWYWSDFTDGLN--LQCLAATLFLYFACLSPAITFGGLLGEATDGAIGVMEVLLSTAICGI 79 (510)
T ss_dssp -------------------STTCHHHCCSS---SHHHHHHHHHHHHHHHHHHSSS-SS---------HHHHHHHHHHHHH
T ss_pred Ccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999999999999999999999999999 69999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCcceeeeeccchHHHHHHHHHhhhcccccccccchhhHHHHHHHHHHHHHHHHHHHhcchhhhcccccchhHHH
Q 006628 81 IHSIVGGQPLLILGVAEPTVIMYTYLYNFAKDREDLGQKLYLAWAGWVCVWTALMLFLLAVFNAGDLINRFTRIAGELFG 160 (638)
Q Consensus 81 ifslf~GQPL~IlG~TGP~~if~~~ly~~~~~~~~~g~~~fL~~~~WVgiWta~~l~lla~~nas~li~~~TRfTeEiF~ 160 (638)
+||+||||||+|+|+|||+++|++++|+||++++ .||++||+|||+|++++|+++|++|+|.+|||+||||||+|+
T Consensus 80 ~f~lf~gQPL~Ilg~TgP~~vf~~~l~~~~~~~~----~~fl~~~~wig~w~~~~~~~~~~~~~s~lv~~~TRfTeEiF~ 155 (510)
T PF00955_consen 80 IFSLFSGQPLTILGSTGPVLVFEKILYKFCKSYG----LDFLPFRAWIGIWTAIFLLVLAAFNASFLVRYITRFTEEIFA 155 (510)
T ss_dssp HHHHCC--------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999986 689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhccccCCCC---------------CCCc---------------------c---c----------
Q 006628 161 MLIAVLFIQQAIKGMVTEFKIPKDE---------------DSNL---------------------D---K---------- 191 (638)
Q Consensus 161 ~lIsviFi~eaik~l~~~F~~p~~~---------------~~~~---------------------~---~---------- 191 (638)
+|||+|||+||+|+++++|+..+.+ +++. + +
T Consensus 156 ~lIs~iFi~ea~~~l~~~~~~~p~~~~~~~~~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~g~~~g~~c 235 (510)
T PF00955_consen 156 LLISIIFIYEAIKKLVKIFKKYPLNSDYVTQYSCQCTPPENSNNSTLNPWTNLNNGSINWSNLSNSECENINGELVGTSC 235 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999988642100 0000 0 0
Q ss_pred -chhhhcchhhHHHHHHHHHHHHHHHhhhccccccccccccchhhccchhhHHHHHHhhhccccCccCCCCCcccccCCC
Q 006628 192 -YQFQWLYTNGLLGIIFTFGLVYTALKSRKARFWWYGTGWLRSFVADYGVPLMVVVWTALSFSVPSKVPSGVPRRLFSPL 270 (638)
Q Consensus 192 -~~~~~~~~~~llsliL~~gt~~~a~~l~~~r~s~y~~~~~R~~iaDfgvpiaV~~~t~~~y~~~~~vp~~~~~rl~~p~ 270 (638)
.+.++.++++++|++|++||+++|++++++|+|+|+++++|++++|||+||+|++|++++|..+.++| ++.+|+
T Consensus 236 ~~~~~~~p~taLlSliL~lgTf~la~~L~~fk~S~yf~~~vR~~isDf~v~iaI~~~~~~~~~~~~~~~-----kL~vp~ 310 (510)
T PF00955_consen 236 DDHVQYQPDTALLSLILALGTFWLAYTLRQFKNSPYFPRWVREIISDFGVPIAILIMTLVDYLFGVDTP-----KLNVPS 310 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCCCCcHHHHHHHHHHHHHHHHHHHHHhcCCcCccHHHHHhHHhhHHHHHHHHHHHHHHHhccccc-----ccCCCC
Confidence 01133456789999999999999999999999999999999999999999999999999988765444 356677
Q ss_pred CCCCCCC--ccceeeccCCCcchHHHHHHHHHHHHhhhheeechhhHHHHhhcccccCCCCCccchhhHHHHHHHhhhhh
Q 006628 271 PWESGSL--EHWSVMKDMGKVPLAYIFAAFIPAVMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGL 348 (638)
Q Consensus 271 ~~~~~~~--r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~D~nIts~i~n~~e~kLkKgsgyH~DLlllgi~t~icsl 348 (638)
.++|+.. |+|+| .+++++|+|++++|++||+++++|+|||||||++|+|+||||||||+||||||+++|++|++||+
T Consensus 311 ~f~pt~~~~r~W~v-~p~~~~p~w~~~aA~~palll~iL~F~DqnIts~ivn~~e~kLkKg~gyH~DL~llgi~~~v~sl 389 (510)
T PF00955_consen 311 SFKPTSPGKRGWFV-NPFGSLPWWAIFAAIIPALLLTILFFMDQNITSLIVNRPENKLKKGSGYHLDLFLLGIITLVCSL 389 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCCCCeec-CcccCCCHHHHHHHHHHHHHHHHHHHHHHhHhHHHhCChhhccCCCCcccHHHHHHHHHHHHHHH
Confidence 7766654 89996 67889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCCccchhhhhHHHhhchhhhhHHHHHHHHhhccccCCcCcCcCCCcccccccccceeeeecchhhHHHH
Q 006628 349 IGLPPSNGVLPQSPMHTKSLAVLKRQTSEVKELEDLKEVIMKGEKEGEKSKEKFDPEKHIDAYLPVRVNEQRVSNLLQSL 428 (638)
Q Consensus 349 lGLPw~~ga~pqSp~H~~SL~v~~~~~~~~~~~~~~k~~~~~~~~~~g~~~~~fd~e~~i~~~~~v~V~EQRvS~ll~~l 428 (638)
+||||+|||+||||+|++||++++++ .++|++++ +++|+||||||+++|+
T Consensus 390 lGLPw~~aa~~~S~~Hv~sL~~~~~~------------------~~pGe~~~------------i~~V~EqRvT~l~~~~ 439 (510)
T PF00955_consen 390 LGLPWMNAATPQSPMHVRSLAVESET------------------SAPGEKPK------------IVGVREQRVTGLLVHL 439 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCcccCccCCHHHhCcccEEecc------------------ccCCCCCe------------eCeEEEecccHHHHHH
Confidence 99999999999999999999987764 24676432 3799999999999999
Q ss_pred HHHHHhhhccccCcccchhhhhhhHhhhcccCCcchHHHHHHHhhcCCCCCcccccCCCcccccccCcceehhhHHH
Q 006628 429 LVAASVCAMPAIKLIPTSVLWGYFAYMAIDSLPGNQFWERMLLLFITPGRQYKVLEKDHASFVELVPYKYIVIFTLF 505 (638)
Q Consensus 429 Lig~sl~~~PvL~~IP~~VL~GvFlYMGi~SL~Gnq~~eRi~llf~~~~~~~~~~~~~~~~yvr~Vp~~~ihlFT~i 505 (638)
|||+|+++.|+|++||+|||+|+|+|||++||+|||||||++++|||+|++ ||.+|+|+||+||||+||++
T Consensus 440 Ligls~~l~pvL~~IP~~VL~GvFlymG~~sL~gnq~~~Ri~ll~~~~k~~------P~~~ylr~Vp~~~ihlfT~I 510 (510)
T PF00955_consen 440 LIGLSLFLLPVLKLIPMPVLYGVFLYMGVTSLSGNQFFERILLLFMPPKHY------PDTHYLRRVPQRKIHLFTLI 510 (510)
T ss_dssp -------------------------------------TTTT------SS---------------TTHHHHHT-----
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHhheeeeecCccHHHHHHHHccCcccc------cCCHHHCcCCCCeEEEEEeC
Confidence 999999999999999999999999999999999999999999999998763 67799999999999999985
No 4
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=99.38 E-value=4.6e-11 Score=135.39 Aligned_cols=327 Identities=20% Similarity=0.250 Sum_probs=226.9
Q ss_pred hhcchh-hhhhhhccccccCCCcchhHHHHhhhHHHHHHHHhcCcceeeeeccchHHHH-HHHHHhhhcccccccccchh
Q 006628 45 FASALP-VVAFGEQLSRDTDGSLSTVETLASTALCGIIHSIVGGQPLLILGVAEPTVIM-YTYLYNFAKDREDLGQKLYL 122 (638)
Q Consensus 45 FA~l~P-aIaFG~ll~~~T~g~igv~E~L~stai~Giifslf~GQPL~IlG~TGP~~if-~~~ly~~~~~~~~~g~~~fL 122 (638)
.+.++| |++|+..-+ .+..-=|-++.++|++||+|||-|..|.|.||++.+. ...+.+.. . .++
T Consensus 32 a~valP~ama~a~~aG------v~p~~GLyas~i~~~v~alfGgs~~~i~GPt~a~~~v~a~~i~~~~-~-------~g~ 97 (554)
T COG0659 32 AAVALPLAMAFAIAAG------VPPEAGLYASIVAGIIYALFGGSRGLISGPTGAFAVVLAAVIASLV-E-------TGL 97 (554)
T ss_pred HHHHhHHHHHHHHHcC------CCHHHHHHHHHHHHHHHHHHcCCccceeccchhhHHHHHHHHHHHH-H-------HHH
Confidence 344669 999998433 5567778899999999999999999999999996653 44444444 2 255
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcchhhhcccccchhHHHHHHHHHHHHHHHHhhhhccccCCCCCCCcccchhhh--cchh
Q 006628 123 AWAGWVCVWTALMLFLLAVFNAGDLINRFTRIAGELFGMLIAVLFIQQAIKGMVTEFKIPKDEDSNLDKYQFQW--LYTN 200 (638)
Q Consensus 123 ~~~~WVgiWta~~l~lla~~nas~li~~~TRfTeEiF~~lIsviFi~eaik~l~~~F~~p~~~~~~~~~~~~~~--~~~~ 200 (638)
...+-..+-++++++++..+-..++++|+.|-.=--|-.=|+++-+..-++.+.. .+...+....+....+ ....
T Consensus 98 ~~~~~~tllaGv~~i~~G~lRLG~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G---~~~~~~~~~~~~~~l~~~~~~~ 174 (554)
T COG0659 98 ALAFLATLLAGVFQILLGLLRLGRLIRFIPRPVLIGFTAGIAILIILTQLPVLLG---LASKVSGFWAKVSALFTVLLTI 174 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcC---CCccccchHHHHHHHHHhcccc
Confidence 5566788999999999999999999999988665566666777777777776643 2211111101110000 0111
Q ss_pred hHHHHHHHHHHHHHHHhhhccccccccccccchhhccchhhHHHHHHhhhccccCccCC-CC-CcccccCCCCCCCCCCc
Q 006628 201 GLLGIIFTFGLVYTALKSRKARFWWYGTGWLRSFVADYGVPLMVVVWTALSFSVPSKVP-SG-VPRRLFSPLPWESGSLE 278 (638)
Q Consensus 201 ~llsliL~~gt~~~a~~l~~~r~s~y~~~~~R~~iaDfgvpiaV~~~t~~~y~~~~~vp-~~-~~~rl~~p~~~~~~~~r 278 (638)
...++++...++.+-+..++.+ +..|+ ..+++++.|.+++.++.+.+ .| ++..++.+.|
T Consensus 175 ~~~~~~lg~~~l~il~~~~~~~--~~~P~----------~liaiv~~t~i~~~~~~~~~~~G~i~~~lp~~~~------- 235 (554)
T COG0659 175 NLATLLLGLLTLAILLFLPRLT--PRIPS----------PLIALVLGTLIVWIFPLDSLRYGEIPGSLPSGLP------- 235 (554)
T ss_pred cHHHHHHHHHHHHHHHHccchh--hhCCc----------HHHHHHHHHHHHHHhcCCchhcccCcccCCcCCC-------
Confidence 2345555555555555554444 33343 67899999999988776653 22 3333333332
Q ss_pred cceeeccCCCcchHHHHHHHHHHHHhhhheeechhhHHHHhhcccccCCCCCccchhhHHHHHHHhhhhhcCCCCCCCCC
Q 006628 279 HWSVMKDMGKVPLAYIFAAFIPAVMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGLIGLPPSNGVL 358 (638)
Q Consensus 279 ~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~D~nIts~i~n~~e~kLkKgsgyH~DLlllgi~t~icsllGLPw~~ga~ 358 (638)
+|. ..+++...+..-+.+|+.++++-+.|+=.|+....+..+. ..--+-+|.-.|+-|+++|++|==+.+|++
T Consensus 236 ~~~----~P~~~~~~~~~l~~~al~la~lg~iesllta~~~~~~~~~---~~d~nrELiaqGiaNi~sglfgg~p~~g~~ 308 (554)
T COG0659 236 HFR----LPNVSLSLLLALLPYALALALLGLLESLLTAVSFDGMTGT---KHDSNRELIAQGIANIASGLFGGIPATGSI 308 (554)
T ss_pred ccc----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCHHHHHhhHHHHHHHHhCCccccchh
Confidence 222 2345555566666779999999999999999887655433 334466899999999999999977778888
Q ss_pred CCCccchhhhhHHHhhchhhhhHHHHHHHHhhccccCCcCcCcCCCcccccccccceeeeecchhhHHHHHHHHHhh-hc
Q 006628 359 PQSPMHTKSLAVLKRQTSEVKELEDLKEVIMKGEKEGEKSKEKFDPEKHIDAYLPVRVNEQRVSNLLQSLLVAASVC-AM 437 (638)
Q Consensus 359 pqSp~H~~SL~v~~~~~~~~~~~~~~k~~~~~~~~~~g~~~~~fd~e~~i~~~~~v~V~EQRvS~ll~~lLig~sl~-~~ 437 (638)
.||....+| |. -+|+|+++.++++.+.++ +.
T Consensus 309 srS~~nv~s----------------------------Ga--------------------rT~lsgi~~a~~lll~l~~~~ 340 (554)
T COG0659 309 SRSAINIKS----------------------------GA--------------------RTRLSGIIHAALLLLLLLFLA 340 (554)
T ss_pred HHHHHHHHh----------------------------CC--------------------cChHHHHHHHHHHHHHHHHHH
Confidence 777655542 32 379999999988877754 67
Q ss_pred cccCcccchhhhhhhHhhhcccCCc
Q 006628 438 PAIKLIPTSVLWGYFAYMAIDSLPG 462 (638)
Q Consensus 438 PvL~~IP~~VL~GvFlYMGi~SL~G 462 (638)
|++.+||+++|.|+-.+.|++-++-
T Consensus 341 ~~~~~IP~a~Laavli~v~~~l~~~ 365 (554)
T COG0659 341 PLVSYIPLAALAAVLILVGWGLLDW 365 (554)
T ss_pred HHHHhCcHHHHHHHHHHHHHHhccH
Confidence 8999999999999999999987665
No 5
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=99.22 E-value=9.5e-10 Score=124.92 Aligned_cols=328 Identities=13% Similarity=0.138 Sum_probs=210.0
Q ss_pred chh-hhhhhhccccccCCCcchhHHHHhhhHHHHHHHHhcCcceeeeeccchHHHHH-HHHHhhhcccccccccchhhHH
Q 006628 48 ALP-VVAFGEQLSRDTDGSLSTVETLASTALCGIIHSIVGGQPLLILGVAEPTVIMY-TYLYNFAKDREDLGQKLYLAWA 125 (638)
Q Consensus 48 l~P-aIaFG~ll~~~T~g~igv~E~L~stai~Giifslf~GQPL~IlG~TGP~~if~-~~ly~~~~~~~~~g~~~fL~~~ 125 (638)
..| ++||+.+-+ -.-.+| |.++.+.+++|++||+-|.++.|+|+.+.++. .++-++..... ...++....
T Consensus 28 ~iP~~~ayA~lag--lpp~~G----Lysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~~v~~~~~~~~--~~~~~~~~a 99 (563)
T TIGR00815 28 LIPQAMAYAILAG--LSPIYG----LYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGSVIARVGLQYL--FDCDAIRLA 99 (563)
T ss_pred HHHHHHHHHHHcC--CCchhh----hHHHHHHHHHhheecCCCcccCCHHHHHHHHHHHHHHHhcCCCC--cccHHHHHH
Confidence 345 888887652 233344 88999999999999999999999998876653 33444544322 013588888
Q ss_pred HHHHHHHHHHHHHHHHHhcchhhhcccccchhHHHHHHHHHHHHHHHHhhhhccccC-CCCCCCcccchhhhc--chh--
Q 006628 126 GWVCVWTALMLFLLAVFNAGDLINRFTRIAGELFGMLIAVLFIQQAIKGMVTEFKIP-KDEDSNLDKYQFQWL--YTN-- 200 (638)
Q Consensus 126 ~WVgiWta~~l~lla~~nas~li~~~TRfTeEiF~~lIsviFi~eaik~l~~~F~~p-~~~~~~~~~~~~~~~--~~~-- 200 (638)
..+++-++++++++..+....+++|+.+-.=.-|..=++++.+..-++.+... +.+ ...+. .++....|. ...
T Consensus 100 ~~l~~l~Gi~~~~~g~lrlG~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~-~~~~~~~~~-~~~~~~~~~~l~~~~~ 177 (563)
T TIGR00815 100 FTLTLLAGIFQVILGLLRLGFLIEFLSHAVISGFMTGAAITIGLSQLKGLLGI-SIFNTRTDT-LGVVISTWAGLPNTHN 177 (563)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCC-CCCCCCCCh-HHHHHHHHHHhhhccc
Confidence 99999999999999999999999999987777888888998888888888653 211 11111 000000000 000
Q ss_pred -hHHHHHHHHHHHHHHHhhhccccccccccccchhhcc--chhhHHHHHHhhhccccC---------ccCCCCCcccccC
Q 006628 201 -GLLGIIFTFGLVYTALKSRKARFWWYGTGWLRSFVAD--YGVPLMVVVWTALSFSVP---------SKVPSGVPRRLFS 268 (638)
Q Consensus 201 -~llsliL~~gt~~~a~~l~~~r~s~y~~~~~R~~iaD--fgvpiaV~~~t~~~y~~~---------~~vp~~~~~rl~~ 268 (638)
-..++++++.++.+-+..++.+ ++.|+.+.= -+..+++++.+.++++.. .++|.+.|
T Consensus 178 ~~~~~~~i~~~~~~~l~~~~~~~------~~~~~~~~~~~p~~li~vi~~~~~~~~~~~~~~~~~~~g~ip~g~p----- 246 (563)
T TIGR00815 178 WNWCTLVIGLVLLLFLLYTKKLG------KRNKKLLFAPAVAPLLVVILATLAVTIGLHKKQGVSILGHIPSGLS----- 246 (563)
T ss_pred cchHHHHHHHHHHHHHHHHHHhh------hhccchhcccccHHHHHHHHHHHHHHHHccCCCCeEEEeecCCCCC-----
Confidence 1233444444444433333322 112222110 122334444444443331 11222211
Q ss_pred CCCCCCCCCccceeeccCCCcchHHHHHHHHHHHHhhhheeechhhHHHHhhcccccCCCCCccchhhHHHHHHHhhhhh
Q 006628 269 PLPWESGSLEHWSVMKDMGKVPLAYIFAAFIPAVMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGL 348 (638)
Q Consensus 269 p~~~~~~~~r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~D~nIts~i~n~~e~kLkKgsgyH~DLlllgi~t~icsl 348 (638)
.| +....++..+...+..|+.++++-|.|+-.++.-..++. ++..-.+-++...|+.|+++|+
T Consensus 247 ----------~~----~~~~~~~~~~~~l~~~a~~ia~v~~~e~l~~a~~~~~~~---~~~~d~n~El~a~G~~N~~~~~ 309 (563)
T TIGR00815 247 ----------FF----PPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMT---GYKIDANQELVAQGIANIVGSF 309 (563)
T ss_pred ----------CC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCCCcHHHHHhhHHHHHHHH
Confidence 01 011122233455566789999999999988877665442 2335567789999999999999
Q ss_pred cCCCCCCCCCCCCccchhhhhHHHhhchhhhhHHHHHHHHhhccccCCcCcCcCCCcccccccccceeeeecchhhHHHH
Q 006628 349 IGLPPSNGVLPQSPMHTKSLAVLKRQTSEVKELEDLKEVIMKGEKEGEKSKEKFDPEKHIDAYLPVRVNEQRVSNLLQSL 428 (638)
Q Consensus 349 lGLPw~~ga~pqSp~H~~SL~v~~~~~~~~~~~~~~k~~~~~~~~~~g~~~~~fd~e~~i~~~~~v~V~EQRvS~ll~~l 428 (638)
+|--+.++..-||....+ .|. -+|+++++.++
T Consensus 310 fg~~p~~~s~srs~~~~~----------------------------~G~--------------------~t~~a~i~~~~ 341 (563)
T TIGR00815 310 FSCYPATGSLSRTAVNAK----------------------------AGC--------------------RTQLSGVVTAI 341 (563)
T ss_pred hCccCCCCcchHHHHHHh----------------------------cCC--------------------cchHHHHHHHH
Confidence 999888888865443332 132 36899999998
Q ss_pred HHHHH-hhhccccCcccchhhhhhhHhhhcccCCc
Q 006628 429 LVAAS-VCAMPAIKLIPTSVLWGYFAYMAIDSLPG 462 (638)
Q Consensus 429 Lig~s-l~~~PvL~~IP~~VL~GvFlYMGi~SL~G 462 (638)
++.+. +++.|++..||+++|.|+-++.|+. +..
T Consensus 342 ~~l~~~l~~~~~l~~iP~~~la~ili~~~~~-l~~ 375 (563)
T TIGR00815 342 VVLLVLLVLTPLFYYIPQAALAAIIISAVRG-LID 375 (563)
T ss_pred HHHHHHHHHHHHHHhChHHHHHHHHHHHHhc-ccC
Confidence 88776 4568999999999999999999999 553
No 6
>PRK11660 putative transporter; Provisional
Probab=99.15 E-value=1.8e-09 Score=122.93 Aligned_cols=327 Identities=16% Similarity=0.180 Sum_probs=197.3
Q ss_pred chh-hhhhhhccccccCCCcchhHHHHhhhHHHHHHHHhcCcceeeeeccchHHHHHHHHHhhhcccccccccchhhHHH
Q 006628 48 ALP-VVAFGEQLSRDTDGSLSTVETLASTALCGIIHSIVGGQPLLILGVAEPTVIMYTYLYNFAKDREDLGQKLYLAWAG 126 (638)
Q Consensus 48 l~P-aIaFG~ll~~~T~g~igv~E~L~stai~Giifslf~GQPL~IlG~TGP~~if~~~ly~~~~~~~~~g~~~fL~~~~ 126 (638)
..| ++||+..-+ +..+-=|.|+.+++++|++||+-|.++.|+|+.+.+.. ....+..+ +.-..
T Consensus 43 ~iPq~mayA~lag------~pp~~GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~~---~~~~~~~~-------~~~~~ 106 (568)
T PRK11660 43 AIPLAMALAIASG------VPPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVIL---YPVSQQFG-------LAGLL 106 (568)
T ss_pred HHHHHHHHHHHcC------CChHHHHHHHHHHHHHHHHhcCCCCcccChhHHHHHHH---HHHHHHhh-------HHHHH
Confidence 445 777774422 22333488999999999999999999999888776653 33333322 22345
Q ss_pred HHHHHHHHHHHHHHHHhcchhhhcccccchhHHHHHHHHHHHHHHHHhhhhccccCCCCCCCcccc---hhhhcchhhHH
Q 006628 127 WVCVWTALMLFLLAVFNAGDLINRFTRIAGELFGMLIAVLFIQQAIKGMVTEFKIPKDEDSNLDKY---QFQWLYTNGLL 203 (638)
Q Consensus 127 WVgiWta~~l~lla~~nas~li~~~TRfTeEiF~~lIsviFi~eaik~l~~~F~~p~~~~~~~~~~---~~~~~~~~~ll 203 (638)
...+.++++.+++..+....+++|+.+=.=.-|..=++++.+..-++++... +.+....+..++. -.+....+ ..
T Consensus 107 ~~~~l~Gii~~l~gllrlG~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~lG~-~~~~~~~~~~~~l~~~~~~l~~~~-~~ 184 (568)
T PRK11660 107 VATLMSGIILILMGLARLGRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGL-QMAHVPEHYLEKVGALFQALPTIN-WG 184 (568)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCccHHHHHHHHHHhhccCC-HH
Confidence 6789999999999999999999999887777777778887777777766431 1110000000000 00000111 12
Q ss_pred HHHHHHHHHHHHHhhhccccccccccccchhhccchhhHHHHHHhhhccccCcc---CC-----------CC-----Ccc
Q 006628 204 GIIFTFGLVYTALKSRKARFWWYGTGWLRSFVADYGVPLMVVVWTALSFSVPSK---VP-----------SG-----VPR 264 (638)
Q Consensus 204 sliL~~gt~~~a~~l~~~r~s~y~~~~~R~~iaDfgvpiaV~~~t~~~y~~~~~---vp-----------~~-----~~~ 264 (638)
++++++.++.+.+.+++++. ..+ +..+++++.+.++|..... ++ ++ +|+
T Consensus 185 ~~~~~~~~l~lll~~~~~~~--~iP----------~~li~iiv~t~~~~~~~~~~~~v~~vg~~~~~~~~~g~~~~~ip~ 252 (568)
T PRK11660 185 DALIGIVTLGVLILWPRLKI--RLP----------GHLPALLAGTAVMGVLNLLGGHVATIGSRFHYVLADGSQGNGIPP 252 (568)
T ss_pred HHHHHHHHHHHHHHHHhhcc--cCc----------hHHHHHHHHHHHHHHHhccCCCceeecccccccccccccccCCCC
Confidence 33444444443333433331 111 2245666666666543211 11 10 111
Q ss_pred cccC-CCCCCCCCCccceeeccCCCcchHHHHHHHHHHHHhhhheeechhhHHHHhhcccccCCCCCccchhhHHHHHHH
Q 006628 265 RLFS-PLPWESGSLEHWSVMKDMGKVPLAYIFAAFIPAVMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMT 343 (638)
Q Consensus 265 rl~~-p~~~~~~~~r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~D~nIts~i~n~~e~kLkKgsgyH~DLlllgi~t 343 (638)
.++. ..||.+. ++ ..+..++++..+..-+..|+.++++-|.|.-.++.-..++. +|..-.+-+|.-.|+.|
T Consensus 253 ~~p~~~~p~~~~---~~--~~~~~~~~~~~~~~ll~~a~~iaiv~~iesl~~~~~~~~~~---~~~~d~n~EL~a~G~aN 324 (568)
T PRK11660 253 LLPQFVLPWNLP---GA--DGQPFTLSWDLIRALLPAAFSMAMLGAIESLLCAVVLDGMT---GTKHSANSELVGQGLGN 324 (568)
T ss_pred CCCCCCCCcccc---cc--ccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCCCCcHHHHHHhHHH
Confidence 1100 0111100 00 00122334444444555688888888888865554443322 23345788999999999
Q ss_pred hhhhhcCCCCCCCCCCCCccchhhhhHHHhhchhhhhHHHHHHHHhhccccCCcCcCcCCCcccccccccceeeeecchh
Q 006628 344 LLCGLIGLPPSNGVLPQSPMHTKSLAVLKRQTSEVKELEDLKEVIMKGEKEGEKSKEKFDPEKHIDAYLPVRVNEQRVSN 423 (638)
Q Consensus 344 ~icsllGLPw~~ga~pqSp~H~~SL~v~~~~~~~~~~~~~~k~~~~~~~~~~g~~~~~fd~e~~i~~~~~v~V~EQRvS~ 423 (638)
+++|++|-.+.++...||-+..+ .|. -+|+++
T Consensus 325 i~~~~fgg~p~~~s~srSa~n~~----------------------------aGa--------------------rT~la~ 356 (568)
T PRK11660 325 IVAPFFGGITATAAIARSAANVR----------------------------AGA--------------------TSPISA 356 (568)
T ss_pred HHHHHhCcccccchHHHHHHHHh----------------------------cCC--------------------CcHHHH
Confidence 99999999998887666522221 242 479999
Q ss_pred hHHHHHHHHHh-hhccccCcccchhhhhhhHhhhcccC
Q 006628 424 LLQSLLVAASV-CAMPAIKLIPTSVLWGYFAYMAIDSL 460 (638)
Q Consensus 424 ll~~lLig~sl-~~~PvL~~IP~~VL~GvFlYMGi~SL 460 (638)
+..++++.+.+ ++.|++.+||.+||.|+-+|.|+.-+
T Consensus 357 iv~a~~~ll~ll~l~~ll~~iP~~vLa~ili~~~~~m~ 394 (568)
T PRK11660 357 VIHALLVLLALLVLAPLLSYLPLSAMAALLLMVAWNMS 394 (568)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhh
Confidence 99999988885 67899999999999999999998743
No 7
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=98.22 E-value=0.00018 Score=84.00 Aligned_cols=328 Identities=16% Similarity=0.190 Sum_probs=186.8
Q ss_pred hh-hhhhhhccccccCCCcchhHHHHhhhHHHHHHHHhcCcceeeeeccchHHHHHH-HHHhhhccccc-ccccchhhHH
Q 006628 49 LP-VVAFGEQLSRDTDGSLSTVETLASTALCGIIHSIVGGQPLLILGVAEPTVIMYT-YLYNFAKDRED-LGQKLYLAWA 125 (638)
Q Consensus 49 ~P-aIaFG~ll~~~T~g~igv~E~L~stai~Giifslf~GQPL~IlG~TGP~~if~~-~ly~~~~~~~~-~g~~~fL~~~ 125 (638)
.| +|||+.+-+ +-.+==|-|+.+..++|++||-.+=+-+|+++=+.++.. ++-+.+.+... .....++.-.
T Consensus 95 VPQ~iaYa~la~------lppiyGLYssf~~~~iY~~fGtsr~isiG~~av~sLmv~~~v~~~v~~~~~~~~~~~~i~va 168 (665)
T KOG0236|consen 95 VPQGLAYALLAG------LPPIYGLYSSFFPPLIYAIFGTSRHVSIGPFAVVSLMVGTVVSQVVLSEAPSNDIATTIQVA 168 (665)
T ss_pred cchHHHHHHHcC------CChHHHHHHHHHHHHHheeccCCCcccccHHHHHHHHHHHHHHHHHhccCCCcCcchhHHHH
Confidence 44 677776644 334555678999999999999999988886665555433 22244443210 0113577888
Q ss_pred HHHHHHHHHHHHHHHHHhcchhhhcccccchhHHHHHHHHHHHHHHHHhhhhccccCCCCCCCcccc---hh---hhc-c
Q 006628 126 GWVCVWTALMLFLLAVFNAGDLINRFTRIAGELFGMLIAVLFIQQAIKGMVTEFKIPKDEDSNLDKY---QF---QWL-Y 198 (638)
Q Consensus 126 ~WVgiWta~~l~lla~~nas~li~~~TRfTeEiF~~lIsviFi~eaik~l~~~F~~p~~~~~~~~~~---~~---~~~-~ 198 (638)
+-+++-++++-+++.++..-+++.|+.+=.=--|-.=.|+.-+...+|.+.+.=+.+.+.++...-+ .. .|. .
T Consensus 169 ~~lt~l~Giiq~~mG~lrLGfl~~~lS~~~l~GFt~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (665)
T KOG0236|consen 169 TTLTFLTGIIQLILGLLRLGFLVRFLSEPALSGFTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVFDLLANLPKTL 248 (665)
T ss_pred HHHHHHHHHHHHHHHHHhcChHHHHccHHHHhHhhhhhhhhhhHHhhHhhccccccCCCCCceeEEEeeHHhhhcccccc
Confidence 8999999999999999999999999987554455555666666777777765432333222211100 00 010 1
Q ss_pred hhhHHHHHHHHHHHHHHHh--hhcccccccc-ccccchhhccchhhHHHHHHhhhccccCccCCCCCcccc-cCCCCCCC
Q 006628 199 TNGLLGIIFTFGLVYTALK--SRKARFWWYG-TGWLRSFVADYGVPLMVVVWTALSFSVPSKVPSGVPRRL-FSPLPWES 274 (638)
Q Consensus 199 ~~~llsliL~~gt~~~a~~--l~~~r~s~y~-~~~~R~~iaDfgvpiaV~~~t~~~y~~~~~vp~~~~~rl-~~p~~~~~ 274 (638)
.+..++++...- ....+ ..+.| +++. -.-.|+ .+.|++.|+++|....+-. +.+... .+|..+.+
T Consensus 249 ~~~~~~l~~l~~--L~~~k~~~~~~~-~k~~~v~~~~~-------li~vIi~T~~~~~~~~~~~-~~~~~~~~i~~g~~~ 317 (665)
T KOG0236|consen 249 ATLVLSLIFLVV--LLLTKELNPKFK-KKLFSVPIPFE-------LIVVIIGTLISYIFRLEGR-YGPIIVGEIPRGFPP 317 (665)
T ss_pred hhhhhHHHHHHH--HHHHHHhhhhhc-ccceeecccHH-------HHHHHHHHHHHHHhccccc-cCCeeeccCCCCCCC
Confidence 223333322221 11212 11122 1111 122233 4788888999887643211 111111 22221111
Q ss_pred CCCccceeeccCCCcchHHHHHHHHH-HHHhhhheeech-hhHHHHhhcccccCCCCCccchhhHHHHHHHhhhhhcCCC
Q 006628 275 GSLEHWSVMKDMGKVPLAYIFAAFIP-AVMIAGLYFFDH-SVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGLIGLP 352 (638)
Q Consensus 275 ~~~r~W~V~~~~~~vp~~~i~~A~iP-A~ll~iL~F~D~-nIts~i~n~~e~kLkKgsgyH~DLlllgi~t~icsllGLP 352 (638)
. ++|.......+++ |+.+++.-+.+| +|....+.++.++. --+-+|+.+|++|.++|++|.=
T Consensus 318 ~------------~lp~~~~~~~~~~~~~~i~iva~~~~iai~k~fa~~~~y~v----d~nqELiAlG~~Ni~sSff~~~ 381 (665)
T KOG0236|consen 318 P------------SLPPLSLTPQVIPDAFAIAIVALLEHIAIGKSFASLHGYKV----DSNQELIALGISNILSSFFGCY 381 (665)
T ss_pred C------------CCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCee----CCChHHHHHHHHHHhhhhhceE
Confidence 1 1221111113333 444444444444 34445554444333 2356899999999999999965
Q ss_pred CCCCCCCCCccchhhhhHHHhhchhhhhHHHHHHHHhhccccCCcCcCcCCCcccccccccceeeeecchhhHHHHHHHH
Q 006628 353 PSNGVLPQSPMHTKSLAVLKRQTSEVKELEDLKEVIMKGEKEGEKSKEKFDPEKHIDAYLPVRVNEQRVSNLLQSLLVAA 432 (638)
Q Consensus 353 w~~ga~pqSp~H~~SL~v~~~~~~~~~~~~~~k~~~~~~~~~~g~~~~~fd~e~~i~~~~~v~V~EQRvS~ll~~lLig~ 432 (638)
+..|+.- ||... .+.|. .|+++|++.++++.+
T Consensus 382 p~tgs~s------RSav~----------------------~~sG~--------------------~T~~s~i~~~~~vl~ 413 (665)
T KOG0236|consen 382 PTTGSFS------RSAVN----------------------IKSGG--------------------RTQVAGIVSAALVLL 413 (665)
T ss_pred cccchhh------HHHHH----------------------hhcCC--------------------cchHHHHHHHHHHHH
Confidence 5555442 22211 01231 578999999999988
Q ss_pred Hhh-hccccCcccchhhhhhhHhhhc
Q 006628 433 SVC-AMPAIKLIPTSVLWGYFAYMAI 457 (638)
Q Consensus 433 sl~-~~PvL~~IP~~VL~GvFlYMGi 457 (638)
.+. ++|.+..||++||..+-..-+.
T Consensus 414 ~l~~l~p~f~~iP~~vLaaIIi~a~~ 439 (665)
T KOG0236|consen 414 ALLFLGPLFYYIPKCVLAAIIISALI 439 (665)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHhh
Confidence 864 6899999999999998774443
No 8
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=98.15 E-value=0.00011 Score=80.61 Aligned_cols=317 Identities=15% Similarity=0.131 Sum_probs=165.7
Q ss_pred hHHHHhhcchhhhhhhhccccccC-CCcchhHHHHhhhHHHHHHH----HhcCcceeeeeccchHHHHHHHHHhhhcccc
Q 006628 40 TTYIFFASALPVVAFGEQLSRDTD-GSLSTVETLASTALCGIIHS----IVGGQPLLILGVAEPTVIMYTYLYNFAKDRE 114 (638)
Q Consensus 40 t~fifFA~l~PaIaFG~ll~~~T~-g~igv~E~L~stai~Giifs----lf~GQPL~IlG~TGP~~if~~~ly~~~~~~~ 114 (638)
.+++|-+++++.+-.+.-++-..+ -..-++-++++++++.++++ .+++.--.++|++++... .++..+++.
T Consensus 5 ~l~~~~~~i~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~---~~~~~~~~~- 80 (406)
T TIGR03173 5 VLAMYAGAVAVPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVG---PMIAIGAGG- 80 (406)
T ss_pred hHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHH---HHHHHhhhh-
Confidence 356777776666555443221111 11224568889999999997 567788888888886554 344444332
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHhcchhhhcccccchhHHHHHHHHHHHHHHHHhhhhccccCCCCCCCcccchh
Q 006628 115 DLGQKLYLAWAGWVCVWTALMLFLLAVFNAGDLINRFTRIAGELFGMLIAVLFIQQAIKGMVTEFKIPKDEDSNLDKYQF 194 (638)
Q Consensus 115 ~~g~~~fL~~~~WVgiWta~~l~lla~~nas~li~~~TRfTeEiF~~lIsviFi~eaik~l~~~F~~p~~~~~~~~~~~~ 194 (638)
-++-..-..++++++.++++. -...+.|+++.-.--.+.++|++....-+++..... +. + ..+.
T Consensus 81 ------~~~~~~ga~~v~Gii~illg~-~~~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g~---~~--~---~~~~- 144 (406)
T TIGR03173 81 ------GLGAIFGAVIVAGLFVILLAP-FFSKLVRFFPPVVTGTVITLIGLSLMPVAINWAAGG---AG--A---PDFG- 144 (406)
T ss_pred ------hHHHHHHHHHHHHHHHHHHHH-HHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhccC---CC--c---cccc-
Confidence 223334567778888777772 223445555544433444566666666666654221 10 0 0000
Q ss_pred hhcchhhHHHHHHHHHHHHHHHhhhccccccccccccchhhccchhhHHHHHHhhhccccCc-cCCCCCcccc--cCCCC
Q 006628 195 QWLYTNGLLGIIFTFGLVYTALKSRKARFWWYGTGWLRSFVADYGVPLMVVVWTALSFSVPS-KVPSGVPRRL--FSPLP 271 (638)
Q Consensus 195 ~~~~~~~llsliL~~gt~~~a~~l~~~r~s~y~~~~~R~~iaDfgvpiaV~~~t~~~y~~~~-~vp~~~~~rl--~~p~~ 271 (638)
...+ .++++.++.+.+..++ +.|+++.-+++.+++++.+.+++..+. +.+. +.... ..|.|
T Consensus 145 --~~~~----~~l~l~~l~~~il~~~---------~~~~~~~~~aiLi~ivvg~iva~~~g~~~~~~-i~~~~~~~~P~~ 208 (406)
T TIGR03173 145 --SPQN----LGLALLTLVIILLLNR---------FGKGFLRSIAVLLGLVVGTIVAAALGMVDFSG-VAEAPWFALPTP 208 (406)
T ss_pred --chHH----HHHHHHHHHHHHHHHH---------HhhhHHHHhHHHHHHHHHHHHHHHhcCCCchh-hccCCeeeCCCC
Confidence 0011 2223333332222221 234456668999999999888866532 2211 11000 01111
Q ss_pred CCCCCCccceeeccCCCcchHHHHHHHHHHHHhhhheeechhhHHHHhhcccccCCCCCccchhhHHHHHHHhhhhhcCC
Q 006628 272 WESGSLEHWSVMKDMGKVPLAYIFAAFIPAVMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGLIGL 351 (638)
Q Consensus 272 ~~~~~~r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~D~nIts~i~n~~e~kLkKgsgyH~DLlllgi~t~icsllGL 351 (638)
+ .|. .+ ++++ .++++.+.+++.-++|+-=+..-+.+..++-.+....+-.+..-|+-|.++|++|-
T Consensus 209 ~------~~~-~P---~f~~----~~~~~~~~~~lv~~~esig~~~a~~~~~g~~~~~~~~~~~l~~~Gi~~i~aglfG~ 274 (406)
T TIGR03173 209 F------HFG-AP---TFDL----VAILTMIIVYLVSMVETTGDFLALGEITGRPITEKDLAGGLRADGLGSALGGLFNT 274 (406)
T ss_pred C------cCC-CC---eeCH----HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhccchHHhccHHHHHHHHhCC
Confidence 1 111 00 1122 23344455556666776443333322222111234567789999999999999997
Q ss_pred CCCCCCCCCCccchhhhhHHHhhchhhhhHHHHHHHHhhccccCCcCcCcCCCcccccccccceeeeecchhhHHHHHHH
Q 006628 352 PPSNGVLPQSPMHTKSLAVLKRQTSEVKELEDLKEVIMKGEKEGEKSKEKFDPEKHIDAYLPVRVNEQRVSNLLQSLLVA 431 (638)
Q Consensus 352 Pw~~ga~pqSp~H~~SL~v~~~~~~~~~~~~~~k~~~~~~~~~~g~~~~~fd~e~~i~~~~~v~V~EQRvS~ll~~lLig 431 (638)
++.++. .++ -..... .+++ +|.+.+..+++..
T Consensus 275 ~p~t~~-~~~------~~~~~~----------------------------------------tg~~-sr~~~~~~~~~li 306 (406)
T TIGR03173 275 FPYTSF-SQN------VGLVQL----------------------------------------TGVK-SRYVVAAAGVILV 306 (406)
T ss_pred CCCcch-hhh------HHHHHH----------------------------------------hCCC-chHhHHHHHHHHH
Confidence 776542 111 111000 1232 3677766655443
Q ss_pred HH-hh--hccccCcccchhhhhhhHh
Q 006628 432 AS-VC--AMPAIKLIPTSVLWGYFAY 454 (638)
Q Consensus 432 ~s-l~--~~PvL~~IP~~VL~GvFlY 454 (638)
+. ++ ..+++..||.||+.|+.++
T Consensus 307 l~~l~~~~~~l~~~iP~~vlgg~~l~ 332 (406)
T TIGR03173 307 LLGLFPKLAALVASIPQPVLGGAGLV 332 (406)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 33 32 4678999999999997774
No 9
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.12 E-value=1.4e-05 Score=82.40 Aligned_cols=257 Identities=19% Similarity=0.216 Sum_probs=146.6
Q ss_pred HhcchhhhcccccchhHHHHHHHHHHHHHHHHhhhhccccCCCCCCCcccchhhh-cchh--hHHHHHHHHHHHHHHHhh
Q 006628 142 FNAGDLINRFTRIAGELFGMLIAVLFIQQAIKGMVTEFKIPKDEDSNLDKYQFQW-LYTN--GLLGIIFTFGLVYTALKS 218 (638)
Q Consensus 142 ~nas~li~~~TRfTeEiF~~lIsviFi~eaik~l~~~F~~p~~~~~~~~~~~~~~-~~~~--~llsliL~~gt~~~a~~l 218 (638)
+....+++|+.+-.=.-|-.=++++.+...++.+...=..+..++.. .....-+ ...+ ...+.+++.+++...+..
T Consensus 4 lrlG~l~~~ip~pVi~Gf~~g~ai~I~~~Ql~~~~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 82 (280)
T PF00916_consen 4 LRLGFLVRFIPRPVISGFLAGIAILIIFSQLPNLLGIPVVPSHEGLF-SFIRALFQLISTITNWPTLAIGLVALVFLLII 82 (280)
T ss_pred ccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccc-chhhhhhhhhhhccchhhhhhhhHHHHHHhhh
Confidence 45567788888776677888888898999888886521111111111 0000000 0001 122233333333322222
Q ss_pred hccccccccccccchhhccchhhHHHHHHhhhccccCccCC-----CCCcccccCCCCCCCCCCccceeeccCCCcchHH
Q 006628 219 RKARFWWYGTGWLRSFVADYGVPLMVVVWTALSFSVPSKVP-----SGVPRRLFSPLPWESGSLEHWSVMKDMGKVPLAY 293 (638)
Q Consensus 219 ~~~r~s~y~~~~~R~~iaDfgvpiaV~~~t~~~y~~~~~vp-----~~~~~rl~~p~~~~~~~~r~W~V~~~~~~vp~~~ 293 (638)
+..++ ++-.+..+.+- +..+++++.+.+++....+.. ..++..+ |.+.-|. .++++..
T Consensus 83 ~~~~~-~~~~~~~~~~p---~~li~vv~~~~~~~~~~~~~~~v~~~~~i~~~l--p~~~~p~-----------~~~~~~~ 145 (280)
T PF00916_consen 83 RLLPK-RLPSRFWPPIP---APLIVVVLGTLLSWLFLLDKYGVAIVGEIPSGL--PPPSLPS-----------FDISWSL 145 (280)
T ss_pred hhhhh-hcccccccccc---ccceeeehhhhhhhhhhhccccccccccccccC--ccccCcc-----------ccccccc
Confidence 22221 01011122222 223445555555544321111 1111111 1111110 1122222
Q ss_pred HHHHHHHHHHhhhheeechhhHHHHhhcccccCCCCCccchhhHHHHHHHhhhhhcCCCCCCCCCCCCccchhhhhHHHh
Q 006628 294 IFAAFIPAVMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKR 373 (638)
Q Consensus 294 i~~A~iPA~ll~iL~F~D~nIts~i~n~~e~kLkKgsgyH~DLlllgi~t~icsllGLPw~~ga~pqSp~H~~SL~v~~~ 373 (638)
+...+..|+.++++-++|+-.++....++ -++..-.+-++.-+|+.|+++|++|--+.++..-||..+.++
T Consensus 146 ~~~~~~~a~~ia~v~~~~s~~~~~~~~~~---~~~~~d~n~El~a~G~aNi~s~~~gg~p~~~s~srs~~~~~~------ 216 (280)
T PF00916_consen 146 ILDLLPTALAIAIVGFIESLLIAKSIAKK---TGYRIDPNQELIALGLANIVSGLFGGMPGSGSFSRSAVNYRA------ 216 (280)
T ss_pred ccccchhHHHHHHHHHHHHHHhhhhhccc---ccccCCcHHHHHHhhhccccchhhcccccccccccchHHHhc------
Confidence 33445567888888888887777666443 345567888999999999999999988888888777655432
Q ss_pred hchhhhhHHHHHHHHhhccccCCcCcCcCCCcccccccccceeeeecchhhHHHHHHHHHh-hhccccCcccchhhhhhh
Q 006628 374 QTSEVKELEDLKEVIMKGEKEGEKSKEKFDPEKHIDAYLPVRVNEQRVSNLLQSLLVAASV-CAMPAIKLIPTSVLWGYF 452 (638)
Q Consensus 374 ~~~~~~~~~~~k~~~~~~~~~~g~~~~~fd~e~~i~~~~~v~V~EQRvS~ll~~lLig~sl-~~~PvL~~IP~~VL~GvF 452 (638)
|. .+|+++++.++.+.+.+ +..|++.+||+++|.|+-
T Consensus 217 ----------------------Ga--------------------~t~~s~~~~~~~~l~~l~~~~~~l~~iP~~~La~il 254 (280)
T PF00916_consen 217 ----------------------GA--------------------RTRLSGLISALFVLLVLLFLAPLLAYIPKAVLAAIL 254 (280)
T ss_pred ----------------------Cc--------------------ceeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 37999999998887765 457899999999999999
Q ss_pred HhhhcccCCcchHHHH
Q 006628 453 AYMAIDSLPGNQFWER 468 (638)
Q Consensus 453 lYMGi~SL~Gnq~~eR 468 (638)
+|.|++ |-.-.-+++
T Consensus 255 i~~~~~-l~~~~~~~~ 269 (280)
T PF00916_consen 255 IVVGIS-LIDWSSLRR 269 (280)
T ss_pred HHHHHh-hcCHHHHHH
Confidence 999999 655444433
No 10
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=98.07 E-value=0.00024 Score=78.37 Aligned_cols=320 Identities=17% Similarity=0.152 Sum_probs=177.3
Q ss_pred hHHHHhhcchhhhhhhhccccccCCCcchhHHHHhhhHHHHHHHHhcCcc---eeeeeccchHHHHHHHHHhhhcccccc
Q 006628 40 TTYIFFASALPVVAFGEQLSRDTDGSLSTVETLASTALCGIIHSIVGGQP---LLILGVAEPTVIMYTYLYNFAKDREDL 116 (638)
Q Consensus 40 t~fifFA~l~PaIaFG~ll~~~T~g~igv~E~L~stai~Giifslf~GQP---L~IlG~TGP~~if~~~ly~~~~~~~~~ 116 (638)
.+.+|-++++|-+..|..+-+.-+-..=++-+++.++++-+++++.++.| .+++|++--. +-..+. .....+
T Consensus 15 ~l~~~~~~i~~p~iv~~~~l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~--i~~~~~-~~~~~~-- 89 (415)
T TIGR00801 15 LLAMFGGTVLVPLLVGLAPLSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAF--VSPMIA-IGSGLG-- 89 (415)
T ss_pred HHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHH--HHHHHH-HHhccC--
Confidence 45677788888777776662222333345678889999999999999999 6667765211 111111 111111
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHH---hc-chhhhcccccchhHHHHHHHHHHHHHHHHhhhhccccCCCCCCCcccc
Q 006628 117 GQKLYLAWAGWVCVWTALMLFLLAVF---NA-GDLINRFTRIAGELFGMLIAVLFIQQAIKGMVTEFKIPKDEDSNLDKY 192 (638)
Q Consensus 117 g~~~fL~~~~WVgiWta~~l~lla~~---na-s~li~~~TRfTeEiF~~lIsviFi~eaik~l~~~F~~p~~~~~~~~~~ 192 (638)
.+. ..=..++++++.++++.+ .. -.+.|+++.-.--...++|.+....-+++.+......|. + .++
T Consensus 90 --~~~---~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~~~~g~~~~~~--~---~~~ 159 (415)
T TIGR00801 90 --IPA---IMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVKMAAGGEAAMS--S---ATY 159 (415)
T ss_pred --HHH---HHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHHHhccCCCccc--c---ccc
Confidence 111 112344555555555553 11 123566777777788888888888888887743222110 1 011
Q ss_pred hhhhcchhhHHHHHHHHHHHHHHHhhhccccccccccccchhhccchhhHHHHHHhhhccccCc-cCCCCCcccccCCCC
Q 006628 193 QFQWLYTNGLLGIIFTFGLVYTALKSRKARFWWYGTGWLRSFVADYGVPLMVVVWTALSFSVPS-KVPSGVPRRLFSPLP 271 (638)
Q Consensus 193 ~~~~~~~~~llsliL~~gt~~~a~~l~~~r~s~y~~~~~R~~iaDfgvpiaV~~~t~~~y~~~~-~vp~~~~~rl~~p~~ 271 (638)
. + .-.+++++.++.+.+..+ ++.|+++.-+++.+++++.+.+++..+. +.+ ++ ...|
T Consensus 160 ----~--~-~~~~~vg~~~l~~~vl~~---------~~~~g~~~~~aiLigiv~g~i~a~~lg~~~~~-~v-----~~~~ 217 (415)
T TIGR00801 160 ----G--S-LENLGVAFVVLALIILLN---------RFGKGFLKSISILIGILVGYILALFMGIVDFS-PV-----IDAP 217 (415)
T ss_pred ----C--c-hhhHHHHHHHHHHHHHHH---------HHHhhHHHHHHHHHHHHHHHHHHHHcCCccch-hh-----ccCc
Confidence 0 0 112344444544443322 1234456667999999999998876542 211 11 1112
Q ss_pred CCCCCCccceeecc---CC-CcchHHHHHHHHHHHHhhhheeechhhHHHHhhccc-ccCCCCCccchhhHHHHHHHhhh
Q 006628 272 WESGSLEHWSVMKD---MG-KVPLAYIFAAFIPAVMIAGLYFFDHSVASQLAQQKE-FNLKKPSAYHYDILLLGFMTLLC 346 (638)
Q Consensus 272 ~~~~~~r~W~V~~~---~~-~vp~~~i~~A~iPA~ll~iL~F~D~nIts~i~n~~e-~kLkKgsgyH~DLlllgi~t~ic 346 (638)
| +-.++ .+ ++. +.++.+.+.+++.-++|+.=+..-+.++. .+..|....+=+++.-|+-|+++
T Consensus 218 ~--------~~lP~~~~~g~~f~----~~~~~~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adGl~~i~a 285 (415)
T TIGR00801 218 W--------FSLPTPFTFGPSFE----WPAILTMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADGLATLLA 285 (415)
T ss_pred c--------cccCCccCCCceec----HHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhhHHHHHH
Confidence 2 11111 10 122 23444556677777888844433323222 22222456778999999999999
Q ss_pred hhcCCCCCCCCCCCCccchhhhhHHHhhchhhhhHHHHHHHHhhccccCCcCcCcCCCcccccccccceeeeecchhhHH
Q 006628 347 GLIGLPPSNGVLPQSPMHTKSLAVLKRQTSEVKELEDLKEVIMKGEKEGEKSKEKFDPEKHIDAYLPVRVNEQRVSNLLQ 426 (638)
Q Consensus 347 sllGLPw~~ga~pqSp~H~~SL~v~~~~~~~~~~~~~~k~~~~~~~~~~g~~~~~fd~e~~i~~~~~v~V~EQRvS~ll~ 426 (638)
|++|-.+.++.. | + .|-.. -.+|+.+++.-...
T Consensus 286 glfG~~p~t~~s-e------n---------------------------~g~~~-------------~T~~~sr~~~~~~a 318 (415)
T TIGR00801 286 GLFGGFPNTTFA-Q------N---------------------------IGVIA-------------LTRVASRWVIVGAA 318 (415)
T ss_pred HhcCCCCCcchh-h------h---------------------------heeee-------------ecCCCchHHHHHHH
Confidence 999976665432 1 0 01000 02444445443333
Q ss_pred HHHHHHHhh--hccccCcccchhhhhhhHhh
Q 006628 427 SLLVAASVC--AMPAIKLIPTSVLWGYFAYM 455 (638)
Q Consensus 427 ~lLig~sl~--~~PvL~~IP~~VL~GvFlYM 455 (638)
.+++.+.++ +.+++..||.||+.|+.++|
T Consensus 319 ~~~i~~~l~pk~~~l~~~iP~~vlgg~~l~~ 349 (415)
T TIGR00801 319 VILIALGFFPKIAALITSIPSPVLGGASIVM 349 (415)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 444555565 67899999999999999854
No 11
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=97.80 E-value=0.0028 Score=70.78 Aligned_cols=332 Identities=14% Similarity=0.088 Sum_probs=182.9
Q ss_pred hHHHHhhcchhhhhhhhccccccCC-CcchhHHHHhhhHHHHHHHHhcCcceeeeeccchHHHHHHHHHhhhcccccccc
Q 006628 40 TTYIFFASALPVVAFGEQLSRDTDG-SLSTVETLASTALCGIIHSIVGGQPLLILGVAEPTVIMYTYLYNFAKDREDLGQ 118 (638)
Q Consensus 40 t~fifFA~l~PaIaFG~ll~~~T~g-~igv~E~L~stai~Giifslf~GQPL~IlG~TGP~~if~~~ly~~~~~~~~~g~ 118 (638)
.++||-.+++|-+..+..++-..+. .+=++-+++.++++.++.+.+|..=.++.|+|+..+ ..+..+|......|
T Consensus 18 vl~m~~~~i~vPliva~a~gl~~~~~~~li~~~l~~sGIaTllQ~~~G~rlPiv~G~Sf~~~---~~~~~i~~~~~~~g- 93 (433)
T PRK11412 18 FFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWW---GTILTITLGEASRG- 93 (433)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeeCCchHHH---HHHHHHHhcccccC-
Confidence 5667777888888888775543332 233456788999999999999888888888777543 23444453221111
Q ss_pred cch---hhHHHHHHHHHHHHHHHHHHHh-cchhhhcccccchhHHHHHHHHHHHHHHHHhhhhc-cccCCCCCCCcccch
Q 006628 119 KLY---LAWAGWVCVWTALMLFLLAVFN-AGDLINRFTRIAGELFGMLIAVLFIQQAIKGMVTE-FKIPKDEDSNLDKYQ 193 (638)
Q Consensus 119 ~~f---L~~~~WVgiWta~~l~lla~~n-as~li~~~TRfTeEiF~~lIsviFi~eaik~l~~~-F~~p~~~~~~~~~~~ 193 (638)
.++ +.-..+-.+=++++.++++.++ ...+.|+||-..--..=++|.+-.+--+++.+... +.. . +++.
T Consensus 94 ~~~~~~~g~l~g~~i~~g~~~~~lg~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~~a~~~~~G~~~~~--~-----~~~~ 166 (433)
T PRK11412 94 TPINDIATSLAVGIALSGVVTILIGFSGLGHRLARLFTPMVMVVFMLLLGAQLTTIFFKGMLGLPFGI--A-----DPNG 166 (433)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhHHHHHHhhHHHHHHHhcCCCccC--c-----cccc
Confidence 111 1111233455566667666666 33455666666666677788888888888877542 110 0 0010
Q ss_pred hhhcchhhHHHHHHHHHHHHHHHhhhccccccccccccchhhccchhhHHHHHHhhhc-cccCccCCCCCcccccCCCCC
Q 006628 194 FQWLYTNGLLGIIFTFGLVYTALKSRKARFWWYGTGWLRSFVADYGVPLMVVVWTALS-FSVPSKVPSGVPRRLFSPLPW 272 (638)
Q Consensus 194 ~~~~~~~~llsliL~~gt~~~a~~l~~~r~s~y~~~~~R~~iaDfgvpiaV~~~t~~~-y~~~~~vp~~~~~rl~~p~~~ 272 (638)
++ .+..+.+++.++...+.+. .+-|++++.|++.+++++-..+. ...+.|.. .+
T Consensus 167 -~~----~~~~~~~a~~~l~~il~~~---------~~~~g~~~~~svLiGiv~G~v~a~~~~g~d~~-~v---------- 221 (433)
T PRK11412 167 -KI----QLPPFGLSVAVMCLVLAMI---------IFLPQRIARYSLLVGTIVGWILWAFCFPSSHS-LS---------- 221 (433)
T ss_pred -cc----chHHHHHHHHHHHHHHHHH---------HHhhhHHHHHHHHHHHHHHHHHHHHHhCCCcc-hh----------
Confidence 11 1112334444444333321 12366788899999999977764 22221110 00
Q ss_pred CCCCCccceeeccCCCcchHHHHHHHHHHHHhhhheee----chhhHHHHhhcccccCCCCCccchhhHHHHHHHhhhhh
Q 006628 273 ESGSLEHWSVMKDMGKVPLAYIFAAFIPAVMIAGLYFF----DHSVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGL 348 (638)
Q Consensus 273 ~~~~~r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~----D~nIts~i~n~~e~kLkKgsgyH~DLlllgi~t~icsl 348 (638)
..-.|... ++ ..|...-..++++.+++++.-.. |+..++.+.+++ ..|+..++=-+..=|+-++++|+
T Consensus 222 ---~~a~w~~~-pf-G~P~~F~~~~il~~~~~~lv~~~e~iG~~~a~~~~~~~~---~~~~~~l~rgi~~dGi~s~lagl 293 (433)
T PRK11412 222 ---GELHWQWF-PL-GSGGALEPGIILTAVITGLVNISNTYGAIRGTDVFYPQQ---GAGNTRYRRSFVATGFMTLITVP 293 (433)
T ss_pred ---ccCCceee-cC-CCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---CCCCcccccchhhccHHHHHHHh
Confidence 11124321 22 12210112233444444433332 555666665543 23344666678888999999999
Q ss_pred cCCCCCCCCCCCCccchhhhhHHHhhchhhhhHHHHHHHHhhccccCCcCcCcCCCcccccccccceeeeecchhhHHHH
Q 006628 349 IGLPPSNGVLPQSPMHTKSLAVLKRQTSEVKELEDLKEVIMKGEKEGEKSKEKFDPEKHIDAYLPVRVNEQRVSNLLQSL 428 (638)
Q Consensus 349 lGLPw~~ga~pqSp~H~~SL~v~~~~~~~~~~~~~~k~~~~~~~~~~g~~~~~fd~e~~i~~~~~v~V~EQRvS~ll~~l 428 (638)
+|-++..... +. -|-.. ..+|.--|+......+
T Consensus 294 fg~~p~tt~s--------------qN--------------------vGvi~-------------~TgV~SR~v~~~aa~i 326 (433)
T PRK11412 294 LAVIPFSPFV--------------SS--------------------IGLLT-------------QTGDYRRRSFIYGSVM 326 (433)
T ss_pred cCCCCCCchh--------------hh--------------------hhhhh-------------hcCCchhHHHHHHHHH
Confidence 9966652111 10 11100 1366666676666667
Q ss_pred HHHHHhh--hccccCcccchhhhhhhHhh-hcccCCc
Q 006628 429 LVAASVC--AMPAIKLIPTSVLWGYFAYM-AIDSLPG 462 (638)
Q Consensus 429 Lig~sl~--~~PvL~~IP~~VL~GvFlYM-Gi~SL~G 462 (638)
|+.++++ +.-++..||.||+.|+++.| |.-...|
T Consensus 327 lillgl~PK~~alia~IP~pVlGg~~~~~Fg~I~~~G 363 (433)
T PRK11412 327 CLLVALIPALTRLFCSIPLPVSSAVMLVSYLPLLGSA 363 (433)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 7666664 22368999999999999754 3333334
No 12
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=97.55 E-value=0.0071 Score=67.39 Aligned_cols=121 Identities=14% Similarity=0.119 Sum_probs=67.3
Q ss_pred hhHHHHhhcchhhhhhhhccccccCCCcchhHHHHhhhHHHHHHHHh--cCcceeeeeccchHHHHHHHHHhhhcccccc
Q 006628 39 PTTYIFFASALPVVAFGEQLSRDTDGSLSTVETLASTALCGIIHSIV--GGQPLLILGVAEPTVIMYTYLYNFAKDREDL 116 (638)
Q Consensus 39 at~fifFA~l~PaIaFG~ll~~~T~g~igv~E~L~stai~Giifslf--~GQPL~IlG~TGP~~if~~~ly~~~~~~~~~ 116 (638)
-.+.||-.+++|-+-.| ++..++++.++++-++++.. ++-|+. +|+++- |-..+-..+... ..
T Consensus 39 h~lam~~~~v~~Plilg----------l~~~~tl~~sGi~TllQ~~~~G~rlP~v-~G~sf~---f~~~~~~~~~~~-~~ 103 (429)
T TIGR03616 39 HAVAMFGATVLMPLLMG----------FDPNLTILMSGIGTLLFFLITGGRVPSY-LGSSAA---FVGAVIAATGYN-GQ 103 (429)
T ss_pred HHHHHHHHHHHHHHHhC----------CCHhHHHHHHHHHHHHHHHHhCCCceeE-EcCcHH---HHHHHHHHHhhc-cc
Confidence 34556666655555554 22337899999999999864 666664 465543 322222222100 01
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHhcc----hhhhcccccchhHHHHHHHHHHHHHHHHh
Q 006628 117 GQKLYLAWAGWVCVWTALMLFLLAVFNAG----DLINRFTRIAGELFGMLIAVLFIQQAIKG 174 (638)
Q Consensus 117 g~~~fL~~~~WVgiWta~~l~lla~~nas----~li~~~TRfTeEiF~~lIsviFi~eaik~ 174 (638)
+..++++-..-..+-++++.++++.+... .+.|+++--.--...++|.+-.+.-+++.
T Consensus 104 ~~~~~~~~a~ga~iv~G~i~~llg~~~~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~vg~~~ 165 (429)
T TIGR03616 104 GTNPNIALALGGIIACGLVYAAIGLVVMRTGTRWIERLMPPVVTGAVVMAIGLNLAPIAVKS 165 (429)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 11246666667777888888888776543 23344444434444455555555555554
No 13
>PRK10720 uracil transporter; Provisional
Probab=97.30 E-value=0.023 Score=63.40 Aligned_cols=318 Identities=16% Similarity=0.158 Sum_probs=158.5
Q ss_pred hHHHHhhcchhhhhhhhccccccCCCcchhHHHHhhhHHHHHHHHhcC-cceeeeeccchHHHHHHHHHhhhcccccccc
Q 006628 40 TTYIFFASALPVVAFGEQLSRDTDGSLSTVETLASTALCGIIHSIVGG-QPLLILGVAEPTVIMYTYLYNFAKDREDLGQ 118 (638)
Q Consensus 40 t~fifFA~l~PaIaFG~ll~~~T~g~igv~E~L~stai~Giifslf~G-QPL~IlG~TGP~~if~~~ly~~~~~~~~~g~ 118 (638)
.+.||-++++|-+-+| ++..++++.++++-++++.+.| .=-++.|++ -.|-..+-.... .+
T Consensus 24 vl~m~~~~i~~Pli~g----------l~~~~~l~~sGi~TliQ~~~~g~rlP~~~G~s---fa~i~~~~~~~~-~~---- 85 (428)
T PRK10720 24 LFAMFGATVLVPILFH----------INPATVLLFNGIGTLLYLFICKGKIPAYLGSS---FAFISPVLLLLP-LG---- 85 (428)
T ss_pred HHHHHHHHHHHHhhcC----------CCHHHHHHHHHHHHHHHHHhccCccceEEeCc---HHHHHHHHHHHH-cc----
Confidence 4568888888887774 3345689999999999998774 333355543 233222222222 11
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHh----cchhhhcccccchhHHHHHHHHHHHHHHHHhhhhccccCCCCCCCcccchh
Q 006628 119 KLYLAWAGWVCVWTALMLFLLAVFN----AGDLINRFTRIAGELFGMLIAVLFIQQAIKGMVTEFKIPKDEDSNLDKYQF 194 (638)
Q Consensus 119 ~~fL~~~~WVgiWta~~l~lla~~n----as~li~~~TRfTeEiF~~lIsviFi~eaik~l~~~F~~p~~~~~~~~~~~~ 194 (638)
+... .=..++++++.++++.+- ...+.|.++...--.|-++|.+--..-+++.. .. .+. ++ ...
T Consensus 86 ~~~~---lgav~v~Glv~ills~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~L~~~~~~~~-g~--~~~--~~--~~~-- 153 (428)
T PRK10720 86 YEVA---LGGFIMCGVLFCLVALIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMA-GL--LPA--EG--QTP-- 153 (428)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChHHHHHHHHHHHHHhHHHHHhhc-cc--cCC--CC--ccc--
Confidence 1222 124567777777777752 22355666665555555555555444444321 10 010 00 000
Q ss_pred hhcchhhHHHHHHHHHHHHHHHhhhccccccccccccchhhccchhhHHHHHHhhhccccCc-cCCCCCcccccCCCCCC
Q 006628 195 QWLYTNGLLGIIFTFGLVYTALKSRKARFWWYGTGWLRSFVADYGVPLMVVVWTALSFSVPS-KVPSGVPRRLFSPLPWE 273 (638)
Q Consensus 195 ~~~~~~~llsliL~~gt~~~a~~l~~~r~s~y~~~~~R~~iaDfgvpiaV~~~t~~~y~~~~-~vp~~~~~rl~~p~~~~ 273 (638)
. ...+++++.++.+.+.. +++ .|++..-+++.+++++.+.+++..+. +.+ .+. ..+|.
T Consensus 154 --~----~~~~~lalv~l~iil~~-----~~~----~kg~~~~~~iLigIvvG~ila~~lG~~d~~-~v~-----~a~~~ 212 (428)
T PRK10720 154 --D----SKTIIISMVTLAVTVLG-----SVL----FRGFLAIIPILIGVLVGYALSFAMGMVDTT-PII-----EAHWF 212 (428)
T ss_pred --c----hHHHHHHHHHHHHHHHH-----HHH----hccHHHHhHHHHHHHHHHHHHHHhcCCCHH-Hhh-----cCccc
Confidence 0 11233444444433321 111 23345556688999998888866542 111 111 01111
Q ss_pred CCCCccceeeccCCCcchHHHHHHHHHHHHhhhheeechhhHHHHhhc--ccccCCCCCccchhhHHHHHHHhhhhhcCC
Q 006628 274 SGSLEHWSVMKDMGKVPLAYIFAAFIPAVMIAGLYFFDHSVASQLAQQ--KEFNLKKPSAYHYDILLLGFMTLLCGLIGL 351 (638)
Q Consensus 274 ~~~~r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~D~nIts~i~n~--~e~kLkKgsgyH~DLlllgi~t~icsllGL 351 (638)
. ...|. . + ++.+..+ .++.|..++. ++|+ +.+..+.. -+.+..|....+=+++.-|+-|.++|++|-
T Consensus 213 ~--lP~~~-~-P--~fd~~~i-l~l~~~~lv~---~~Es-iG~~~a~~~~~~~~~~~~~~~~r~l~adGlatii~glfG~ 281 (428)
T PRK10720 213 A--LPTFY-T-P--RFEWFAI-LTILPAALVV---IAEH-VGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGS 281 (428)
T ss_pred c--CCCCC-C-C--cCcHHHH-HHHHHHHHHH---HHHH-HHHHHHHHHhhCCCCCCCccccchHhhhhHHHHHHHhcCC
Confidence 0 00011 0 1 1222222 2444433333 3454 33332211 112222345678899999999999999997
Q ss_pred CCCCCCCCCCccchhhhhHHHhhchhhhhHHHHHHHHhhccccCCcCcCcCCCcccccccccceeeeecchhhHHHHHHH
Q 006628 352 PPSNGVLPQSPMHTKSLAVLKRQTSEVKELEDLKEVIMKGEKEGEKSKEKFDPEKHIDAYLPVRVNEQRVSNLLQSLLVA 431 (638)
Q Consensus 352 Pw~~ga~pqSp~H~~SL~v~~~~~~~~~~~~~~k~~~~~~~~~~g~~~~~fd~e~~i~~~~~v~V~EQRvS~ll~~lLig 431 (638)
++..+ . .+. .|-.. ..+|..-++......+++.
T Consensus 282 ~p~tt-y-------------~en--------------------~g~ia-------------~T~v~sr~v~~~a~~~li~ 314 (428)
T PRK10720 282 TPNTT-Y-------------GEN--------------------IGVMA-------------ITRVYSTWVIGGAAIIAIL 314 (428)
T ss_pred CCccc-c-------------ccc--------------------cceee-------------ecccchhHHHHHHHHHHHH
Confidence 75433 1 110 11100 0244444443333334444
Q ss_pred HHhh--hccccCcccchhhhhhhHhh-hcccCCcchHH
Q 006628 432 ASVC--AMPAIKLIPTSVLWGYFAYM-AIDSLPGNQFW 466 (638)
Q Consensus 432 ~sl~--~~PvL~~IP~~VL~GvFlYM-Gi~SL~Gnq~~ 466 (638)
++++ +.+++..||.||+.|+.++| |.-...|.+.+
T Consensus 315 lg~~pk~~a~ia~iP~pVlgg~~i~~fg~i~~~Gi~~l 352 (428)
T PRK10720 315 LSCVGKLAAAIQAIPLPVMGGVSLLLYGVIGASGIRVL 352 (428)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4442 45689999999999999855 33444444443
No 14
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=97.26 E-value=0.01 Score=64.91 Aligned_cols=332 Identities=15% Similarity=0.176 Sum_probs=156.2
Q ss_pred HHHHhhcchhhhhhhhccc--cccCCCcchhHHHHhhhHHHHHHHHhcCcceeeeeccchHHHHHHHHHhhhccc-cccc
Q 006628 41 TYIFFASALPVVAFGEQLS--RDTDGSLSTVETLASTALCGIIHSIVGGQPLLILGVAEPTVIMYTYLYNFAKDR-EDLG 117 (638)
Q Consensus 41 ~fifFA~l~PaIaFG~ll~--~~T~g~igv~E~L~stai~Giifslf~GQPL~IlG~TGP~~if~~~ly~~~~~~-~~~g 117 (638)
+.++-+.+++.+-.+..++ +++. .=+.-++++++++-+++++..|-|+-+.=..+-..+. .+...... ...
T Consensus 12 l~m~~~~iv~P~il~~~~g~~~~~~--~li~at~l~sgi~Tllq~~~~g~~lpl~~G~s~~~~~---~~~~~~g~~~~~- 85 (389)
T PF00860_consen 12 LAMFYIIIVVPLILAAAFGLDADTA--ALISATFLVSGIATLLQGLPAGHRLPLVPGPSFAFIF---AFMIVIGMAESG- 85 (389)
T ss_dssp HHHHHHHHHHHHTTTS-------------HHHHHHHHHHHHHHHHHHTTT-----EEE-GGGHH---HHHGGG-----H-
T ss_pred HHHHHHHHHhHHHHhhcccccchhh--HHHHHHHHHHHHHHHHHHhcCCCceecccccchhhhh---hhhcccccccch-
Confidence 3344444444444444333 3333 3457789999999999999888888766433333332 22222221 000
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhcc-hhhhcccccchhHHHHHHHHHHHHHHHHhhhhccccCCCCCCCcccchhhh
Q 006628 118 QKLYLAWAGWVCVWTALMLFLLAVFNAG-DLINRFTRIAGELFGMLIAVLFIQQAIKGMVTEFKIPKDEDSNLDKYQFQW 196 (638)
Q Consensus 118 ~~~fL~~~~WVgiWta~~l~lla~~nas-~li~~~TRfTeEiF~~lIsviFi~eaik~l~~~F~~p~~~~~~~~~~~~~~ 196 (638)
...+ +-..=..+..+++.++++.++.- .+.|.++.-.-....++|.+-...-+++.+...-..+ +. ..+.
T Consensus 86 ~~~~-~~~~g~~~i~gi~~~~l~~~g~~~~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~~---~~--~~~~--- 156 (389)
T PF00860_consen 86 GYGL-QAALGAVLISGILFILLGLTGLRKRLRRLFPPVVKGAVVLLIGLSLAPIGLKNAGGIWGNP---DG--LLVG--- 156 (389)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHTT-SH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS---B---TT---B-----
T ss_pred hhch-hhhhhHHHHHHHHHHHHHHhchHHHHHHHhChhheEeeEeeehhhhhhhHhhccccccccc---cc--cccc---
Confidence 0112 22223457888888888888885 5677788777778888899888889988775422111 11 0000
Q ss_pred cchhhHHHHHHHHHHHHHHHhhhccccccccccccchhhccchhhHHHHHHhhhccccC-ccCCCCCcccccCCCCCCCC
Q 006628 197 LYTNGLLGIIFTFGLVYTALKSRKARFWWYGTGWLRSFVADYGVPLMVVVWTALSFSVP-SKVPSGVPRRLFSPLPWESG 275 (638)
Q Consensus 197 ~~~~~llsliL~~gt~~~a~~l~~~r~s~y~~~~~R~~iaDfgvpiaV~~~t~~~y~~~-~~vp~~~~~rl~~p~~~~~~ 275 (638)
...+ ..+++.++...+..... .|....-+++.+++++-+.+++... .+.+..+ ...||
T Consensus 157 ~~~~----~~~~~~~~~~~~~~~~~---------~~~~~~~~ailigi~~g~i~~~~~g~~~~~~~~-----~~~~~--- 215 (389)
T PF00860_consen 157 DGKN----LGLAVLTLLFILLLSLF---------LKGFLRKGAILIGIIAGWIVAAILGVVDFSPSV-----SSAPW--- 215 (389)
T ss_dssp -HHH----HHHHHHHHHHHHHHHHS---------SSTTTTTHHHHHHHHHHHHHHHHHHHTTSSH-H-----HHS-S---
T ss_pred cccc----cccccccchhhhhhhhh---------hhhhcccccchhhhhhhhhhhhcccccccCccc-----ccccc---
Confidence 0011 11222222222222111 4555567899999999888876543 1111101 11222
Q ss_pred CCccceeeccC--CCcchHHHHHHHHHHHHhhhheeech----hhHHHHhhcccccCCCCCccchhhHHHHHHHhhhhhc
Q 006628 276 SLEHWSVMKDM--GKVPLAYIFAAFIPAVMIAGLYFFDH----SVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGLI 349 (638)
Q Consensus 276 ~~r~W~V~~~~--~~vp~~~i~~A~iPA~ll~iL~F~D~----nIts~i~n~~e~kLkKgsgyH~DLlllgi~t~icsll 349 (638)
+-.+.. +..|. .-..++++.+.+++.-++|+ .-.+.+++++..+ ....+--+..-|+-+.++|++
T Consensus 216 -----~~~p~~~~~g~p~-f~~~~i~~~~~~~lv~~~es~G~~~a~~~~~~~~~~~---~~~~~r~l~~dg~~~~l~gl~ 286 (389)
T PF00860_consen 216 -----FSLPSPFPFGWPS-FDPGAILTFLIFALVAMFESIGTIVAVARIAGKDDPR---PPRIRRGLLADGLGTILAGLF 286 (389)
T ss_dssp -----S---------------HHHHHHHTHHHHHHHHHHHHHHHHHHHHHTS-TCC---CCCHHHHHHHHHHHHHHHHHH
T ss_pred -----ccccccccccccc-ccHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCCcc---chhhcccceeeeeeeeechhh
Confidence 211100 11111 11222333333333334443 2333344433322 667778889999999999999
Q ss_pred CCCCCCCCCCCCccchhhhhHHHhhchhhhhHHHHHHHHhhccccCCcCcCcCCCcccccccccceeeeecchhhHH---
Q 006628 350 GLPPSNGVLPQSPMHTKSLAVLKRQTSEVKELEDLKEVIMKGEKEGEKSKEKFDPEKHIDAYLPVRVNEQRVSNLLQ--- 426 (638)
Q Consensus 350 GLPw~~ga~pqSp~H~~SL~v~~~~~~~~~~~~~~k~~~~~~~~~~g~~~~~fd~e~~i~~~~~v~V~EQRvS~ll~--- 426 (638)
|-.+. -...++-...+. -+|.- |-+.+..
T Consensus 287 G~~~~-------t~~~en~g~i~~----------------------------------------t~v~S-r~~~~~a~~~ 318 (389)
T PF00860_consen 287 GTSPT-------TTYSENAGGIAA----------------------------------------TGVAS-RRVGLTAGVI 318 (389)
T ss_dssp T---E-------EE-HHHHHHHHH----------------------------------------HTB---HHHHHHHHHH
T ss_pred cCCCC-------ccccccchhhhh----------------------------------------hcccc-ceeeeHHHHH
Confidence 95433 122333222211 02222 3344333
Q ss_pred HHHHHHHhhhccccCcccchhhhhhhHh-hhcccCCcchH
Q 006628 427 SLLVAASVCAMPAIKLIPTSVLWGYFAY-MAIDSLPGNQF 465 (638)
Q Consensus 427 ~lLig~sl~~~PvL~~IP~~VL~GvFlY-MGi~SL~Gnq~ 465 (638)
.++.+++..+.|++..||.+|+.|..++ .|.-...|-+.
T Consensus 319 ~i~~~~~p~~~~l~~~IP~~v~gg~~lv~~g~i~~~gi~~ 358 (389)
T PF00860_consen 319 LILFGLSPKFAPLFASIPSPVIGGPLLVLFGMIMMSGIRN 358 (389)
T ss_dssp HHHHT--HHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHhHh
Confidence 2333444556789999999999999875 56555555443
No 15
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=95.62 E-value=0.81 Score=51.62 Aligned_cols=339 Identities=16% Similarity=0.146 Sum_probs=193.5
Q ss_pred hhHHHHhhcchhhhhhhhccccccC-CCcchhHHHHhhhHHHHHHHHhcC----cceeeeeccchHHHHHHHHHhhhccc
Q 006628 39 PTTYIFFASALPVVAFGEQLSRDTD-GSLSTVETLASTALCGIIHSIVGG----QPLLILGVAEPTVIMYTYLYNFAKDR 113 (638)
Q Consensus 39 at~fifFA~l~PaIaFG~ll~~~T~-g~igv~E~L~stai~Giifslf~G----QPL~IlG~TGP~~if~~~ly~~~~~~ 113 (638)
=.+.||-+.+++-+.-|..++-.++ -.+=++-.+++++++-+++++-.+ |=..++|++-- |...+-...+..
T Consensus 25 H~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFa---fi~p~i~~~~~~ 101 (451)
T COG2233 25 HLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFA---FVAPMIAIGGTT 101 (451)
T ss_pred HHHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHH---HHHHHHHHHhcc
Confidence 3677999999998888877654422 223345668899999999998444 66678887542 222222233322
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHhcc-hhhhcccccchhHHHHHHHHHHHHHHHHhhhhccccCCCCCCCcccc
Q 006628 114 EDLGQKLYLAWAGWVCVWTALMLFLLAVFNAG-DLINRFTRIAGELFGMLIAVLFIQQAIKGMVTEFKIPKDEDSNLDKY 192 (638)
Q Consensus 114 ~~~g~~~fL~~~~WVgiWta~~l~lla~~nas-~li~~~TRfTeEiF~~lIsviFi~eaik~l~~~F~~p~~~~~~~~~~ 192 (638)
++ + + =..-.++-.+.++.++...=.. .+.|.++-.---..-++|.+-.+.-|++.+....... .+.+..
T Consensus 102 g~-~----~-~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~Vi~~IGlsL~~vai~~~~G~~~~~----~~~~~~ 171 (451)
T COG2233 102 GD-G----I-AALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPVVLVIGLSLAPVAINMAGGGPGAA----GNPDFG 171 (451)
T ss_pred CC-c----h-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeEeeeehhhhHHHHHHHhhCCCCCC----CCcccC
Confidence 10 0 0 1123445555444444444444 7777787766667888899988999988876543211 111110
Q ss_pred hhhhcchhhHHHHHHHHHHHHHHHhhhccccccccccccchhhccchhhHHHHHHhhhccccCccCCCCCcccccCCCCC
Q 006628 193 QFQWLYTNGLLGIIFTFGLVYTALKSRKARFWWYGTGWLRSFVADYGVPLMVVVWTALSFSVPSKVPSGVPRRLFSPLPW 272 (638)
Q Consensus 193 ~~~~~~~~~llsliL~~gt~~~a~~l~~~r~s~y~~~~~R~~iaDfgvpiaV~~~t~~~y~~~~~vp~~~~~rl~~p~~~ 272 (638)
..-.+.+++.|+.+.+.. ++|+ |.+++-+++.+++++-++++++.+ .+.-
T Consensus 172 --------~~~~l~la~~tl~~il~~-----~~f~----~g~~~~i~ILiGlv~G~~la~~~G-~vdf------------ 221 (451)
T COG2233 172 --------SLENLGLALVTLLIILLI-----NRFG----KGFLRRIPILIGLVVGYLLALFMG-MVDF------------ 221 (451)
T ss_pred --------chhHHHHHHHHHHHHHHH-----HHHh----hhHHHHHHHHHHHHHHHHHHHHhC-CcCc------------
Confidence 122456666666666544 2343 445555788888888888887664 2211
Q ss_pred CCCCCccceeeccCCCcchHHHHHHHHHHHHhhhheeech----hhHHHHhhcccccCCCCCccchhhHHHHHHHhhhhh
Q 006628 273 ESGSLEHWSVMKDMGKVPLAYIFAAFIPAVMIAGLYFFDH----SVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGL 348 (638)
Q Consensus 273 ~~~~~r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~D~----nIts~i~n~~e~kLkKgsgyH~DLlllgi~t~icsl 348 (638)
++-....|+-++.....-...-+.|+++.+.+++.-..|| -.++.+.+| ++.|-+++|=-++-=|+.+++.|+
T Consensus 222 ~~v~~a~w~~~P~~~~fg~~F~~~ail~m~~v~iV~~~E~~G~i~A~~~itg~---~~~~~~~l~rg~~aDGlat~iag~ 298 (451)
T COG2233 222 SGVAEAPWFALPTPFYFGMAFDWGAILTMLPVAIVTIVEHTGDITATGEITGR---DLDGKPRLRRGLLADGLATLIAGL 298 (451)
T ss_pred cccccCceeeCCcccCCCeeecHHHHHHHHHHHHHHHHHHhhhhhhHHhHhCC---cCccCcccccceeeccHHHHHHHh
Confidence 1111223443322221000112345555555555555554 334444443 344456777778888999999999
Q ss_pred cCCCCCCCCCCCCccchhhhhHHHhhchhhhhHHHHHHHHhhccccCCcCcCcCCCcccccccccceeeeecchhhHHHH
Q 006628 349 IGLPPSNGVLPQSPMHTKSLAVLKRQTSEVKELEDLKEVIMKGEKEGEKSKEKFDPEKHIDAYLPVRVNEQRVSNLLQSL 428 (638)
Q Consensus 349 lGLPw~~ga~pqSp~H~~SL~v~~~~~~~~~~~~~~k~~~~~~~~~~g~~~~~fd~e~~i~~~~~v~V~EQRvS~ll~~l 428 (638)
+|=|+... +.+. .|-.. ..+|+-.++.....-+
T Consensus 299 fg~~p~Tt--------------faqN--------------------iGvv~-------------lT~v~Sr~V~~~aavi 331 (451)
T COG2233 299 FGGFPNTT--------------FAQN--------------------IGVVA-------------LTGVYSRYVIAGAAVI 331 (451)
T ss_pred cCCCCCCc--------------hhhc--------------------eeeee-------------eccCChhHHHHHHHHH
Confidence 99665421 1111 23110 1355555555555555
Q ss_pred HHHHHhh--hccccCcccchhhhhhhHh-hhcccCCcchHHHHHH
Q 006628 429 LVAASVC--AMPAIKLIPTSVLWGYFAY-MAIDSLPGNQFWERML 470 (638)
Q Consensus 429 Lig~sl~--~~PvL~~IP~~VL~GvFlY-MGi~SL~Gnq~~eRi~ 470 (638)
++.++++ +.-+++.||.|||-|.=+. -|.-.-.|.+++.|..
T Consensus 332 li~lgl~pk~~al~~sIP~pVlGGa~ivmFG~Ia~sGir~l~~~~ 376 (451)
T COG2233 332 LILLGLFPKFGALIQSIPSPVLGGAMLVLFGMIAASGIRILIRNK 376 (451)
T ss_pred HHHHHhhHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 5555553 2337899999999997553 3666667777776655
No 16
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif
Probab=50.74 E-value=9.7 Score=33.49 Aligned_cols=49 Identities=16% Similarity=0.325 Sum_probs=38.6
Q ss_pred chh-hhhhhhccccccCCCcchhHHHHhhhHHHHHHHHhcCcceeeeeccchHHHH
Q 006628 48 ALP-VVAFGEQLSRDTDGSLSTVETLASTALCGIIHSIVGGQPLLILGVAEPTVIM 102 (638)
Q Consensus 48 l~P-aIaFG~ll~~~T~g~igv~E~L~stai~Giifslf~GQPL~IlG~TGP~~if 102 (638)
.+| +++|+.+-+ +...--|.++.+++++|++||+-|..++|+|+-+.++
T Consensus 30 ~iPq~~a~A~lAg------~pp~~GLy~a~~~~liyalfG~s~~~~~Gp~a~~s~l 79 (84)
T PF13792_consen 30 AIPQGMAYALLAG------VPPIYGLYAAIIPPLIYALFGSSRHMIVGPTAAMSLL 79 (84)
T ss_pred HHHHHHHHHHHcC------CCCCeeeHHHHHHHHHHhhccCCCccccChHHHHHHH
Confidence 467 899996544 2334447789999999999999999999998887664
No 17
>KOG0828 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=40.39 E-value=2.2e+02 Score=33.01 Aligned_cols=218 Identities=20% Similarity=0.238 Sum_probs=112.9
Q ss_pred HHHHHHHHhcCcceeeeeccchHHHHHHHHHhhhcccccccccchhhHHHHHHHHHH-------------------HHHH
Q 006628 77 LCGIIHSIVGGQPLLILGVAEPTVIMYTYLYNFAKDREDLGQKLYLAWAGWVCVWTA-------------------LMLF 137 (638)
Q Consensus 77 i~Giifslf~GQPL~IlG~TGP~~if~~~ly~~~~~~~~~g~~~fL~~~~WVgiWta-------------------~~l~ 137 (638)
.+|+.|+-=++-||+.--+.||.- .+|+.+.+... .| ..=+-.|.. +..-
T Consensus 267 vsgl~yspDC~v~l~l~ntkg~~~----vl~n~aVr~tl----l~---~~~~~~~~~~Ll~q~~~~sps~v~rlSf~~i~ 335 (636)
T KOG0828|consen 267 VSGLVYSPDCFVPLTLNNTKGNVE----VLYNKAVRYTL----LY---IFIVLSQIFLLLRQMRINSPSHVQRLSFLTIA 335 (636)
T ss_pred ccCcccCCCcCcceeeeccccchh----hhhhhhHHHHH----HH---HHHHHHHHHHHHHHHhhcCchhhhhhhhhhHH
Confidence 578999999999999999999943 34555444321 11 001111111 1111
Q ss_pred HHHHHhcchhhhcccc--cchhHHHHHHHHHHHHHH------HHhhhhcccc------CC--CC-------CCCcccchh
Q 006628 138 LLAVFNAGDLINRFTR--IAGELFGMLIAVLFIQQA------IKGMVTEFKI------PK--DE-------DSNLDKYQF 194 (638)
Q Consensus 138 lla~~nas~li~~~TR--fTeEiF~~lIsviFi~ea------ik~l~~~F~~------p~--~~-------~~~~~~~~~ 194 (638)
..|..|++--+.|+|- -.||.|-.|++..|.-=- ++-|+++++. |. +. |.......+
T Consensus 336 mqa~mD~~Lall~lta~~vve~lylpfvtaAF~~fV~~siFemRYLlsI~k~q~~~~~~~a~Rp~T~~~~~n~~r~~~~~ 415 (636)
T KOG0828|consen 336 MQAGMDAYLALLFLTANAVVESLYLPFVTAAFFKFVVFSIFEMRYLLSIWKVQNSNMPPPATRPSTSNSSNNNTRQSNAS 415 (636)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCccccCccccccc
Confidence 2344566655677775 778888888777664322 2334444442 10 00 000000000
Q ss_pred h-hcchhhHHH-HHHHHHHHHHHHhhhccccccccccccchhhccchhhHHHHHHhhhccccCc---cCCCCCcccccCC
Q 006628 195 Q-WLYTNGLLG-IIFTFGLVYTALKSRKARFWWYGTGWLRSFVADYGVPLMVVVWTALSFSVPS---KVPSGVPRRLFSP 269 (638)
Q Consensus 195 ~-~~~~~~lls-liL~~gt~~~a~~l~~~r~s~y~~~~~R~~iaDfgvpiaV~~~t~~~y~~~~---~vp~~~~~rl~~p 269 (638)
. -+....+++ +.++...+.++ .+ .|.+-+...|.. .+.+++++.-||+.+. ++.+| +.|
T Consensus 416 ~e~s~~g~l~grf~fm~lv~~~~-~l----~s~~wp~q~r~y------f~~iLif~~~SfWIPQIv~Nvvrg-~SR---- 479 (636)
T KOG0828|consen 416 NENSPWGILLGRFLFMYLVVCIA-SL----YSAFWPVQFRNY------FIPILIFMYYSFWIPQIVANVVRG-DSR---- 479 (636)
T ss_pred ccCCcchhhHHhHHHHHHHHHHH-Hh----hccccHHHHHHH------HHHHHHHHHHhhhHHHHHHHHhcC-CCC----
Confidence 0 001112222 11222121112 11 234446666663 5778888887877652 22222 111
Q ss_pred CCCCCCCCccceeeccCCCcchHHHHHHHHHHHHhhhheeechhhHHHHhhcccccCCCCCccchhhHHHHHHHhhhhh
Q 006628 270 LPWESGSLEHWSVMKDMGKVPLAYIFAAFIPAVMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGL 348 (638)
Q Consensus 270 ~~~~~~~~r~W~V~~~~~~vp~~~i~~A~iPA~ll~iL~F~D~nIts~i~n~~e~kLkKgsgyH~DLlllgi~t~icsl 348 (638)
.| -+| .+|.++-+--+.+-+-.|.+. +|=+|-++.|||-+.|+..|-.=.++
T Consensus 480 ~P------l~w-----------~yIlG~Tv~Rl~~plyVF~~s----------~n~~r~~p~~~f~v~L~lwmlFQv~v 531 (636)
T KOG0828|consen 480 KP------LHW-----------YYILGMTVTRLAIPLYVFGCS----------ENFMRVEPKYFFAVGLVLWMLFQVLV 531 (636)
T ss_pred CC------cch-----------hhhhhHhHHhhhcceEEEecc----------hhhhccCCchhhHHHHHHHHHHHHHH
Confidence 11 123 356777666666666667665 77899999999998887777554443
No 18
>KOG3817 consensus Uncharacterized conserved protein [Function unknown]
Probab=35.02 E-value=31 Score=38.17 Aligned_cols=63 Identities=24% Similarity=0.360 Sum_probs=40.3
Q ss_pred ceehhhHHHHHHHhhhheeeecchhhHhhhHHHHHH----HHHHhhhh-----cCCCCChhhhcccChhhhcc
Q 006628 497 KYIVIFTLFQFVYFLVCYGVTWIPVAGILFPVPFFL----LISIRQHI-----LPKLFPPHHLQELDAAEYDE 560 (638)
Q Consensus 497 ~~ihlFT~iQl~~l~~~~~v~~~~~aai~FPl~i~l----LIpiR~~l-----lpr~F~~~eL~~LD~~e~ee 560 (638)
..|.++| +|++.++..|.-.|+|-++++--++.+. --|||..- +-|.|.+---+.|..|||||
T Consensus 253 ~~ilmWt-Lqli~lvl~Yfsvq~p~~a~A~iI~~lc~~~l~~pIrw~~~~~~kv~r~fkpl~rRlLtEeEYee 324 (452)
T KOG3817|consen 253 QTILMWT-LQLIGLVLAYFSVQHPSAAIAAIIMVLCFVALYFPIRWTNQIKFKVRRRFKPLKRRLLTEEEYEE 324 (452)
T ss_pred hhHHHHH-HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhhcCHHHHHH
Confidence 4566665 6888888888777887666533222222 23666532 34557777777788888877
No 19
>PF12075 KN_motif: KN motif; InterPro: IPR021939 This small motif is found at the N terminus of Kank proteins and has been called the KN (for Kank N-terminal) motif. This protein is found in eukaryotes. Proteins in this family are typically between 413 to 1202 amino acids in length. This protein is found associated with PF00023 from PFAM. This protein has two conserved sequence motifs: TPYG and LDLDF. Kank1 was obtained by positional cloning of a tumor suppressor gene in renal cell carcinoma, while the other members were found by homology search. The family is involved in the regulation of actin polymerisation and cell motility through signaling pathways containing PI3K/Akt and/or unidentified modulators/effectors [].
Probab=27.99 E-value=24 Score=27.05 Aligned_cols=18 Identities=22% Similarity=0.670 Sum_probs=12.7
Q ss_pred cCCCCCccchhhHHHHHH
Q 006628 325 NLKKPSAYHYDILLLGFM 342 (638)
Q Consensus 325 kLkKgsgyH~DLlllgi~ 342 (638)
.++-|-|||+||=-|-.+
T Consensus 3 sv~tPYGyhiDLDFvkyv 20 (39)
T PF12075_consen 3 SVETPYGYHIDLDFVKYV 20 (39)
T ss_pred cccCCcceeecchHHHHH
Confidence 356689999998655444
No 20
>PF13172 PepSY_TM_1: PepSY-associated TM helix
Probab=27.71 E-value=82 Score=22.83 Aligned_cols=25 Identities=28% Similarity=0.450 Sum_probs=21.0
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcc
Q 006628 121 YLAWAGWVCVWTALMLFLLAVFNAG 145 (638)
Q Consensus 121 fL~~~~WVgiWta~~l~lla~~nas 145 (638)
...+--|+|+++++++++++++++-
T Consensus 5 ~~~~H~~~g~~~~~~ll~~~lTG~~ 29 (34)
T PF13172_consen 5 WRKIHRWLGLIAAIFLLLLALTGAL 29 (34)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456789999999999999998863
No 21
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]
Probab=24.14 E-value=1.2e+03 Score=27.30 Aligned_cols=185 Identities=18% Similarity=0.157 Sum_probs=98.5
Q ss_pred ccchhhccchhhHHHHHHhhhccccC-ccC-CC-----CCcccccCCCCCCCCCCccceeec--cCCCcch--HHHHHHH
Q 006628 230 WLRSFVADYGVPLMVVVWTALSFSVP-SKV-PS-----GVPRRLFSPLPWESGSLEHWSVMK--DMGKVPL--AYIFAAF 298 (638)
Q Consensus 230 ~~R~~iaDfgvpiaV~~~t~~~y~~~-~~v-p~-----~~~~rl~~p~~~~~~~~r~W~V~~--~~~~vp~--~~i~~A~ 298 (638)
.-+++..-|+++++|.+.=+..++.. .++ |. +.+-|.....-+ +...|+-++ -.|..|. +....++
T Consensus 199 ~~~~if~~f~vll~i~ivW~~~~iLT~tgay~~~~~~t~~~~RTD~~~vi---~~apWi~vPyP~QwG~P~f~~~~~f~m 275 (510)
T KOG1292|consen 199 RRIQIFSRFPVLLAIAIVWLYCFILTITGAYPYKPTTTQSSCRTDRNGVI---SSAPWIRVPYPFQWGPPTFSAGLVFAM 275 (510)
T ss_pred cccchHhhccHHHHHHHHHHHHHHHHhccccCCCccccCCcccccHhhhh---ccCCceeecCCCccCCCcccHHHHHHH
Confidence 34778899999999987544443321 011 10 111111100000 112244321 1223331 2223333
Q ss_pred HHHHHhhh-heeechhhHHHHhhcccccCCCCCccchhhHHHHHHHhhhhhcCCCCCCCCCCCCccchhhhhHHHhhchh
Q 006628 299 IPAVMIAG-LYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGFMTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKRQTSE 377 (638)
Q Consensus 299 iPA~ll~i-L~F~D~nIts~i~n~~e~kLkKgsgyH~DLlllgi~t~icsllGLPw~~ga~pqSp~H~~SL~v~~~~~~~ 377 (638)
..|.++++ .=--|=...|++++++. --++.-+=-+.+-|+-.+++|++|- -+|.+.. ++ .
T Consensus 276 ~aa~~va~iES~G~y~a~ar~~~a~p---pP~~~inRgi~~eGig~lL~gl~G~--gtG~Tt~----~E-------N--- 336 (510)
T KOG1292|consen 276 MAASLVAMIESTGDYIACARLSSATP---PPPSVLNRGIGWEGIGSLLAGLFGT--GTGSTTS----VE-------N--- 336 (510)
T ss_pred HHHHHHHHHHhcchHHHHHHHhcCCC---CChhhhhhhhhhhhHHHHHHHhhCC--Cccceee----cc-------c---
Confidence 33333332 22234456777776542 1123333357788999999999992 2333321 10 0
Q ss_pred hhhHHHHHHHHhhccccCCcCcCcCCCcccccccccceeeeecchhhHHHHHHHHHhh--hccccCcccchhhhhhhH--
Q 006628 378 VKELEDLKEVIMKGEKEGEKSKEKFDPEKHIDAYLPVRVNEQRVSNLLQSLLVAASVC--AMPAIKLIPTSVLWGYFA-- 453 (638)
Q Consensus 378 ~~~~~~~k~~~~~~~~~~g~~~~~fd~e~~i~~~~~v~V~EQRvS~ll~~lLig~sl~--~~PvL~~IP~~VL~GvFl-- 453 (638)
-|-- =..+|---|+=......||..+++ ..-++..||.|+..|++.
T Consensus 337 -----------------igll-------------~vTKVgSRrvvQ~aa~fmI~~~i~gKFgA~fAsIP~piv~~l~c~~ 386 (510)
T KOG1292|consen 337 -----------------IGLL-------------GVTKVGSRRVVQIAAGFMIFFGIFGKFGAFFASIPDPIVGGLLCIL 386 (510)
T ss_pred -----------------eeeE-------------eeeeeeeeeehhhhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHH
Confidence 0100 024677788888888899988887 356899999999999876
Q ss_pred --hhhcccCCcchHH
Q 006628 454 --YMAIDSLPGNQFW 466 (638)
Q Consensus 454 --YMGi~SL~Gnq~~ 466 (638)
|.+--.|+.-|+.
T Consensus 387 ~~mv~avgLSnLQf~ 401 (510)
T KOG1292|consen 387 FGMVGAVGLSNLQFV 401 (510)
T ss_pred HHHHHHHhhhhheee
Confidence 3355566666654
Done!