BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006629
(638 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B
Length = 853
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/516 (45%), Positives = 321/516 (62%), Gaps = 16/516 (3%)
Query: 131 YKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIVDKQK 189
Y A+ + FG GA +++ E YL+ ++L+ +PN G ++ C+SW+ K
Sbjct: 95 YDAQFDWDSDFGIPGAFYIKNYMQNEFYLKSLILEDIPNHGTIHFICNSWVYNSKHYKTD 154
Query: 190 RIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIKE- 248
RIFF N +YLPS+TP L + R EEL N++GDG GERK +RIYDYDVYNDL P+ E
Sbjct: 155 RIFFANNTYLPSETPAPLVKYREEELKNVRGDGTGERKEWDRIYDYDVYNDLGDPDKGEK 214
Query: 249 LARPVLGGEEHPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSASSLYS 308
ARPVLGG PYPRR RTGR K+ DP SE +Y+PRDEAF +K F A + S
Sbjct: 215 YARPVLGGSALPYPRRGRTGRGKTRKDPNSEKPGDFVYLPRDEAFGHLKSSDFLAYGIKS 274
Query: 309 GLHALVPFLEAILIDK--DLGFSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVS 366
++P L L F + +++ K++ G+ LP I+ LF+T
Sbjct: 275 VAQDVLPVLTDAFDGNLLSLDFDNFAEVRKLYEGGVTLPTNFLSNITPIPIIKELFRT-- 332
Query: 367 NTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGP 426
G++ ++ P+ + DK W+ +EEF RET+AGLNP IK++ + PL S LD + YG
Sbjct: 333 -DGEQFLKYPPPKVMQVDKSAWMTDEEFARETIAGLNPNVIKIIEEFPLSSKLDTQAYGD 391
Query: 427 PESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTL--YGSRA 484
IT E +E +GGL TV +AI+ KKLFI+D+HD L+PY LR+I +T Y +R
Sbjct: 392 HTCIITKEHLEPNLGGL-TVEQAIQNKKLFILDHHDYLIPY---LRKINANTTKTYATRT 447
Query: 485 LFFLNPDGTLRPLAIELTRPPLDGKPQW--KQVFTPSRHSTDSWLWTLAKAHFLVHDTGY 542
+FFL DGTL PLAIEL++P G+ +V+ PS ++++W LAKA+ +V+D Y
Sbjct: 448 IFFLKNDGTLTPLAIELSKPHPQGEEYGPVSEVYVPSSEGVEAYIWLLAKAYVVVNDACY 507
Query: 543 HQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGGLV 602
HQ+ISHWL TH VEP++IA NR LS +HPI +LL PH+R TM IN+ AR LVNA G++
Sbjct: 508 HQIISHWLNTHAVVEPFVIATNRHLSVVHPIYKLLFPHYRDTMNINSLARKSLVNADGII 567
Query: 603 ETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISR 638
E TF G+YS+E S+VIY K W F +ALP DL+ R
Sbjct: 568 EKTFLWGRYSLEMSAVIY-KDWVFTDQALPNDLVKR 602
>pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy-
9(Z),11(E)-Octadecadienoic Acid
pdb|1HU9|A Chain A, Lipoxygenase-3 (Soybean) Complex With 4-Hydroperoxy-2-
Methoxy-Phenol
pdb|1JNQ|A Chain A, Lipoxygenase-3 (Soybean) Complex With Epigallocathechin
(Egc)
pdb|1N8Q|A Chain A, Lipoxygenase In Complex With Protocatechuic Acid
pdb|1NO3|A Chain A, Refined Structure Of Soybean Lipoxygenase-3 With
4-nitrocatechol At 2.15 Angstrom Resolution
pdb|1RRH|A Chain A, Soybean Lipoxygenase (Lox-3) At Ambient Temperatures At
2.0 A Resolution
pdb|1RRL|A Chain A, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1RRL|B Chain B, Soybean Lipoxygenase (Lox-3) At 93k At 2.0 A Resolution
pdb|1LNH|A Chain A, Lipoxygenase-3(Soybean) Non-Heme Fe(Ii) Metalloprotein
Length = 857
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 240/526 (45%), Positives = 328/526 (62%), Gaps = 27/526 (5%)
Query: 127 GNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIV 185
G +K + G GA +++ TE +L + L+ +PN G ++ C+SWI +
Sbjct: 95 GQSAFKINFEWDDGSGIPGAFYIKNFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKL 154
Query: 186 DKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPE 245
K RIFF N++YLPS+TP L + R EEL+NL+GDG GERK ERIYDYDVYNDL P+
Sbjct: 155 FKSDRIFFANQTYLPSETPAPLVKYREEELHNLRGDGTGERKEWERIYDYDVYNDLGDPD 214
Query: 246 IKE-LARPVLGGEE-HPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSA 303
E ARPVLGG + PYPRR RTGR + DP SESRS +Y+PRDEAF +K F
Sbjct: 215 KGENHARPVLGGNDTFPYPRRGRTGRKPTRKDPNSESRSNDVYLPRDEAFGHLKSSDFLT 274
Query: 304 SSLYSGLHALVPFLEAILIDKDLGFS-----SLSDIDKVFNEGIELPPEL--KDQPLWQK 356
L S ++P L++ DL F+ S ++ +++ GI+LP ++ K PL
Sbjct: 275 YGLKSVSQNVLPLLQSAF---DLNFTPREFDSFDEVHGLYSGGIKLPTDIISKISPL--- 328
Query: 357 ILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLK 416
P+L + G++ +F P+ + K W+ +EEF RE LAG+NP I+ L P +
Sbjct: 329 --PVLKEIFRTDGEQALKFPPPKVIQVSKSAWMTDEEFAREMLAGVNPNLIRCLKDFPPR 386
Query: 417 STLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEG 476
S LD ++YG S IT E +E + GL TV+EAI+ K+LF++D+HD ++PY LR+I
Sbjct: 387 SKLDSQVYGDHTSQITKEHLEPNLEGL-TVDEAIQNKRLFLLDHHDPIMPY---LRRINA 442
Query: 477 STL--YGSRALFFLNPDGTLRPLAIELT--RPPLDGKPQWKQVFTPSRHSTDSWLWTLAK 532
++ Y +R + FL DGTLRPLAIEL+ P D + QVF P+ +S +W LAK
Sbjct: 443 TSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSGAFSQVFLPADEGVESSIWLLAK 502
Query: 533 AHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKAR 592
A+ +V+D+ YHQL+SHWL TH VEP+IIA NR LS +HPI +LL PH+R TM IN AR
Sbjct: 503 AYVVVNDSCYHQLVSHWLNTHAVVEPFIIATNRHLSVVHPIYKLLHPHYRDTMNINGLAR 562
Query: 593 LILVNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISR 638
L LVN GG++E TF G+YS+E S+V+Y K W F +ALP DLI R
Sbjct: 563 LSLVNDGGVIEQTFLWGRYSVEMSAVVY-KDWVFTDQALPADLIKR 607
>pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide
Length = 857
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 238/526 (45%), Positives = 326/526 (61%), Gaps = 27/526 (5%)
Query: 127 GNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIV 185
G +K + G GA +++ TE +L + L+ +PN G ++ C+SWI +
Sbjct: 95 GQSAFKINFEWDDGSGIPGAFYIKNFMQTEFFLVSLTLEDIPNHGSIHFVCNSWIYNAKL 154
Query: 186 DKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPE 245
K RIFF N++YLPS+TP L + R EEL+NL+GDG GERK ERIYDYDVYNDL P+
Sbjct: 155 FKSDRIFFANQTYLPSETPAPLVKYREEELHNLRGDGTGERKEWERIYDYDVYNDLGDPD 214
Query: 246 IKE-LARPVLGGEE-HPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSA 303
E ARPVLGG + PYPRR RTGR + DP SESRS +Y+PRDEAF +K F
Sbjct: 215 KGENHARPVLGGNDTFPYPRRGRTGRKPTRKDPNSESRSNDVYLPRDEAFGHLKSSDFLT 274
Query: 304 SSLYSGLHALVPFLEAILIDKDLGFS-----SLSDIDKVFNEGIELPPEL--KDQPLWQK 356
L S ++P L++ DL F+ S ++ +++ GI+LP ++ K PL
Sbjct: 275 YGLKSVSQNVLPLLQSAF---DLNFTPREFDSFDEVHGLYSGGIKLPTDIISKISPL--- 328
Query: 357 ILPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLK 416
P+L + G++ +F P+ + K W+ +EEF RE LAG+NP I+ L P +
Sbjct: 329 --PVLKEIFRTDGEQALKFPPPKVIQVSKSAWMTDEEFAREMLAGVNPNLIRCLKDFPPR 386
Query: 417 STLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEG 476
S LD ++YG S IT E +E + GL TV+EAI+ K+LF++D+HD ++PY LR+I
Sbjct: 387 SKLDSQVYGDHTSQITKEHLEPNLEGL-TVDEAIQNKRLFLLDHHDPIMPY---LRRINA 442
Query: 477 STL--YGSRALFFLNPDGTLRPLAIELT--RPPLDGKPQWKQVFTPSRHSTDSWLWTLAK 532
++ Y +R + FL DGTLRPLAIEL+ P D + QVF P+ +S +W LAK
Sbjct: 443 TSTKAYATRTILFLKNDGTLRPLAIELSLPHPQGDQSGAFSQVFLPADEGVESSIWLLAK 502
Query: 533 AHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKAR 592
A+ +V+D+ YHQL+SH L TH VEP+IIA NR LS +HPI +LL PH+R TM IN AR
Sbjct: 503 AYVVVNDSCYHQLVSHXLNTHAVVEPFIIATNRHLSVVHPIYKLLHPHYRDTMNINGLAR 562
Query: 593 LILVNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISR 638
L VN GG++E TF G+YS+E S+V+Y K W F +ALP DLI R
Sbjct: 563 LSXVNDGGVIEQTFLWGRYSVEMSAVVY-KDWVFTDQALPADLIKR 607
>pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D
pdb|2IUK|B Chain B, Crystal Structure Of Soybean Lipoxygenase-D
Length = 864
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/507 (43%), Positives = 308/507 (60%), Gaps = 14/507 (2%)
Query: 139 ASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIVDKQKRIFFTNKS 197
ASFG GA +++ E +L + L+ +PN G + C+SW+ K+ RIFF N +
Sbjct: 115 ASFGIPGAFYIKNFMTDEFFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFFVNDT 174
Query: 198 YLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPEIKELARPVLGGE 257
YLPS TP L + R EE L+GDG G+RK +RIYDYDVYNDL P+ + RP+LGG
Sbjct: 175 YLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDYDVYNDLGNPDGGD-PRPILGGC 233
Query: 258 E-HPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSASSLYSGLHALVPF 316
+PYP R RTGR ++ DP SE + +YVPRDE F +K F + S H ++P
Sbjct: 234 SIYPYPLRVRTGRERTRTDPNSE-KPGEVYVPRDENFGHLKSSDFLTYGIKSLSHDVIPL 292
Query: 317 LEAILIDKDLG---FSSLSDIDKVFNEGIELPPELKDQPLWQKILPILFKTVSNTGKEVF 373
++ + + F S D+ ++ GI+LP ++ Q LP L + G+ V
Sbjct: 293 FKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPTDILSQ---ISPLPALKEIFRTDGENVL 349
Query: 374 RFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITT 433
+F P K + +EEF RE +AG+NP I+ L + P KSTLDP +YG S IT
Sbjct: 350 QFPPPHVAKVSKSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTSTITK 409
Query: 434 ELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGT 493
E +E +GG +TV EA+ ++LFI+DY DA +PY+ ++ + + Y +R + FL DGT
Sbjct: 410 EQLEINMGG-VTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKDDGT 468
Query: 494 LRPLAIELTRPPLDGKPQWKQ--VFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWLR 551
L+PLAIEL++P DG + V P+ DS +W LAKAH +V+D+GYHQL+SHWL
Sbjct: 469 LKPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSHWLN 528
Query: 552 THCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVETTFFPGKY 611
TH +EP+ IA NR LS +HPI +LL PH+R T+ IN AR L+NA G++E +F PGKY
Sbjct: 529 THAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKY 588
Query: 612 SMEFSSVIYDKQWRFDHEALPKDLISR 638
S+E SS +Y K W F H+ALP DL+ R
Sbjct: 589 SIEMSSSVY-KNWVFTHQALPADLVKR 614
>pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant
Length = 839
Score = 404 bits (1038), Expect = e-113, Method: Compositional matrix adjust.
Identities = 217/523 (41%), Positives = 310/523 (59%), Gaps = 22/523 (4%)
Query: 127 GNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIV 185
G + + S G GA +++ E +L+ + L+ + N G + C+SW+ +
Sbjct: 77 GESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKL 136
Query: 186 DKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPE 245
K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDYDVYNDL P+
Sbjct: 137 YKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPD 196
Query: 246 IKE-LARPVLGGEE-HPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSA 303
E LARPVLGG PYPRR RTGR + DP +E + YVPRDE +K S
Sbjct: 197 KSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLK----SK 252
Query: 304 SSLYSGLHALV----PFLEAILIDKD--LGFSSLSDIDKVFNEGIELPPELKDQPLWQKI 357
+L G +L P E+ K + F S D+ ++ GI+LP ++ +
Sbjct: 253 DALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTII---P 309
Query: 358 LPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKS 417
LP++ + G+ + +F P V + W+ +EEF RE +AG+NP I+ L + P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 418 TLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGS 477
LDP IYG S IT + ++ + T++EA+ ++LF++DYHD +PYV ++ Q+ +
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 478 TLYGSRALFFLNPDGTLRPLAIELTRPPLDG--KPQWKQVFTPSRHSTDSWLWTLAKAHF 535
Y +R + FL DGTL+P+AIEL+ P G QV P++ +S +W LAKA+
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 536 LVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLIL 595
+V+D+ YHQL+SHWL TH +EP++IA +R LS +HPI +LL PH+R M INA AR L
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 596 VNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISR 638
+NA G+VETTF P KYS+E SS +Y K W F +ALP DLI R
Sbjct: 547 INANGIVETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement
Length = 839
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/523 (41%), Positives = 310/523 (59%), Gaps = 22/523 (4%)
Query: 127 GNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIV 185
G + + S G GA +++ E +L+ + L+ + N G + C+SW+ +
Sbjct: 77 GESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKL 136
Query: 186 DKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPE 245
K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDYDVYNDL P+
Sbjct: 137 YKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPD 196
Query: 246 IKE-LARPVLGGEE-HPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSA 303
E LARPVLGG PYPRR RTGR + DP +E + YVPRDE +K S
Sbjct: 197 KSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLK----SK 252
Query: 304 SSLYSGLHALV----PFLEAILIDKD--LGFSSLSDIDKVFNEGIELPPELKDQPLWQKI 357
+L G +L P E+ K + F S D+ ++ GI+LP ++ +
Sbjct: 253 DALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTII---P 309
Query: 358 LPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKS 417
LP++ + G+ + +F P V + W+ +EEF RE +AG+NP I+ L + P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 418 TLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGS 477
LDP IYG S IT + ++ + T++EA+ ++LF++DYHD +PYV ++ Q+ +
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 478 TLYGSRALFFLNPDGTLRPLAIELTRPPLDG--KPQWKQVFTPSRHSTDSWLWTLAKAHF 535
Y +R + FL DGTL+P+AIEL+ P G QV P++ +S +W LAKA+
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 536 LVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLIL 595
+V+D+ YHQL+SHWL TH +EP++IA +R LS +HPI +LL PH+R M INA AR L
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 596 VNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISR 638
+NA G++ETTF P KYS+E SS +Y K W F +ALP DLI R
Sbjct: 547 INANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant
Length = 839
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/523 (41%), Positives = 310/523 (59%), Gaps = 22/523 (4%)
Query: 127 GNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIV 185
G + + S G GA +++ E +L+ + L+ + N G + C+SW+ +
Sbjct: 77 GESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKL 136
Query: 186 DKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPE 245
K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDYDVYNDL P+
Sbjct: 137 YKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPD 196
Query: 246 IKE-LARPVLGGEE-HPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSA 303
E LARPVLGG PYPRR RTGR + DP +E + YVPRDE +K S
Sbjct: 197 KSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLK----SK 252
Query: 304 SSLYSGLHALV----PFLEAILIDKD--LGFSSLSDIDKVFNEGIELPPELKDQPLWQKI 357
+L G +L P E+ K + F S D+ ++ GI+LP ++ +
Sbjct: 253 DALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTII---P 309
Query: 358 LPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKS 417
LP++ + G+ + +F P V + W+ +EEF RE +AG+NP I+ L + P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 418 TLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGS 477
LDP IYG S IT + ++ + T++EA+ ++LF++DYHD +PYV ++ Q+ +
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 478 TLYGSRALFFLNPDGTLRPLAIELTRPPLDG--KPQWKQVFTPSRHSTDSWLWTLAKAHF 535
Y +R + FL DGTL+P+AIEL+ P G QV P++ +S +W LAKA+
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 536 LVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLIL 595
+V+D+ YHQL+SHWL TH +EP++IA +R LS +HPI +LL PH+R M INA AR L
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 596 VNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISR 638
+NA G++ETTF P KYS+E SS +Y K W F +ALP DLI R
Sbjct: 547 INANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant
Length = 839
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/523 (41%), Positives = 310/523 (59%), Gaps = 22/523 (4%)
Query: 127 GNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIV 185
G + + S G GA +++ E +L+ + L+ + N G + C+SW+ +
Sbjct: 77 GESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKL 136
Query: 186 DKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPE 245
K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDYDVYNDL P+
Sbjct: 137 YKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPD 196
Query: 246 IKE-LARPVLGGEE-HPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSA 303
E LARPVLGG PYPRR RTGR + DP +E + YVPRDE +K S
Sbjct: 197 KSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLK----SK 252
Query: 304 SSLYSGLHALV----PFLEAI--LIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKI 357
+L G +L P E+ L + F S D+ ++ GI+LP ++ +
Sbjct: 253 DALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTII---P 309
Query: 358 LPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKS 417
LP++ + G+ + +F P V + W+ +EEF RE +AG+NP I+ L + P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 418 TLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGS 477
LDP IYG S IT + ++ + T++EA+ ++LF++DYHD +PYV ++ Q+ +
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 478 TLYGSRALFFLNPDGTLRPLAIELTRPPLDG--KPQWKQVFTPSRHSTDSWLWTLAKAHF 535
Y +R + FL DGTL+P+AIEL+ P G QV P++ +S +W LAKA+
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 536 LVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLIL 595
+V+D+ YHQL+SHWL TH +EP++IA +R LS +HPI +LL PH+R M INA AR L
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 596 VNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISR 638
+NA G++ETTF P KYS+E SS +Y K W F +ALP DLI R
Sbjct: 547 INANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant
Length = 839
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/523 (41%), Positives = 310/523 (59%), Gaps = 22/523 (4%)
Query: 127 GNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIV 185
G + + S G GA +++ E +L+ + L+ + N G + C+SW+ +
Sbjct: 77 GESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKL 136
Query: 186 DKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPE 245
K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDYDVYNDL P+
Sbjct: 137 YKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPD 196
Query: 246 IKE-LARPVLGGEE-HPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSA 303
E LARPVLGG PYPRR RTGR + DP +E + YVPRDE +K S
Sbjct: 197 KSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLK----SK 252
Query: 304 SSLYSGLHALV----PFLEAILIDKD--LGFSSLSDIDKVFNEGIELPPELKDQPLWQKI 357
+L G +L P E+ K + F S D+ ++ GI+LP ++ +
Sbjct: 253 DALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTII---P 309
Query: 358 LPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKS 417
LP++ + G+ + +F P V + W+ +EEF RE +AG+NP I+ L + P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 418 TLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGS 477
LDP IYG S IT + ++ + T++EA+ ++LF++DYHD +PYV ++ Q+ +
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 478 TLYGSRALFFLNPDGTLRPLAIELTRPPLDG--KPQWKQVFTPSRHSTDSWLWTLAKAHF 535
Y +R + FL DGTL+P+AIEL+ P G QV P++ +S +W LAKA+
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 536 LVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLIL 595
+V+D+ YHQL+SHWL TH +EP++IA +R LS +HPI +LL PH+R M INA AR L
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 596 VNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISR 638
+NA G++ETTF P KYS+E SS +Y K W F +ALP DLI R
Sbjct: 547 INANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
pdb|1F8N|A Chain A, Lipoxygenase-1 (Soybean) At 100k, New Refinement
pdb|1YGE|A Chain A, Lipoxygenase-1 (Soybean) At 100k
pdb|2SBL|A Chain A, The Three-Dimensional Structure Of An Arachidonic Acid 15-
Lipoxygenase
Length = 839
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/523 (41%), Positives = 310/523 (59%), Gaps = 22/523 (4%)
Query: 127 GNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIV 185
G + + S G GA +++ E +L+ + L+ + N G + C+SW+ +
Sbjct: 77 GESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKL 136
Query: 186 DKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPE 245
K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDYDVYNDL P+
Sbjct: 137 YKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPD 196
Query: 246 IKE-LARPVLGGEE-HPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSA 303
E LARPVLGG PYPRR RTGR + DP +E + YVPRDE +K S
Sbjct: 197 KSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLK----SK 252
Query: 304 SSLYSGLHALV----PFLEAILIDKD--LGFSSLSDIDKVFNEGIELPPELKDQPLWQKI 357
+L G +L P E+ K + F S D+ ++ GI+LP ++ +
Sbjct: 253 DALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTII---P 309
Query: 358 LPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKS 417
LP++ + G+ + +F P V + W+ +EEF RE +AG+NP I+ L + P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 418 TLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGS 477
LDP IYG S IT + ++ + T++EA+ ++LF++DYHD +PYV ++ Q+ +
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 478 TLYGSRALFFLNPDGTLRPLAIELTRPPLDG--KPQWKQVFTPSRHSTDSWLWTLAKAHF 535
Y +R + FL DGTL+P+AIEL+ P G QV P++ +S +W LAKA+
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 536 LVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLIL 595
+V+D+ YHQL+SHWL TH +EP++IA +R LS +HPI +LL PH+R M INA AR L
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 596 VNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISR 638
+NA G++ETTF P KYS+E SS +Y K W F +ALP DLI R
Sbjct: 547 INANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant
Length = 839
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/523 (41%), Positives = 310/523 (59%), Gaps = 22/523 (4%)
Query: 127 GNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIV 185
G + + S G GA +++ E +L+ + L+ + N G + C+SW+ +
Sbjct: 77 GESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKL 136
Query: 186 DKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPE 245
K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDYDVYNDL P+
Sbjct: 137 YKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPD 196
Query: 246 IKE-LARPVLGGEE-HPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSA 303
E LARPVLGG PYPRR RTGR + DP +E + YVPRDE +K S
Sbjct: 197 KSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLK----SK 252
Query: 304 SSLYSGLHALV----PFLEAI--LIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKI 357
+L G +L P E+ L + F S D+ ++ GI+LP ++ +
Sbjct: 253 DALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTII---P 309
Query: 358 LPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKS 417
LP++ + G+ + +F P V + W+ +EEF RE +AG+NP I+ L + P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 418 TLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGS 477
LDP IYG S IT + ++ + T++EA+ ++LF++DYHD +PYV ++ Q+ +
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 478 TLYGSRALFFLNPDGTLRPLAIELTRPPLDG--KPQWKQVFTPSRHSTDSWLWTLAKAHF 535
Y +R + FL DGTL+P+AIEL+ P G QV P++ +S +W LAKA+
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 536 LVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLIL 595
+V+D+ YHQL+SHWL TH +EP++IA +R LS +HPI +LL PH+R M INA AR L
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 596 VNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISR 638
+NA G++ETTF P KYS+E SS +Y K W F +ALP DLI R
Sbjct: 547 INANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant
Length = 839
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/523 (41%), Positives = 310/523 (59%), Gaps = 22/523 (4%)
Query: 127 GNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIV 185
G + + S G GA +++ E +L+ + L+ + N G + C+SW+ +
Sbjct: 77 GESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKL 136
Query: 186 DKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPE 245
K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDYDVYNDL P+
Sbjct: 137 YKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPD 196
Query: 246 IKE-LARPVLGGEE-HPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSA 303
E LARPVLGG PYPRR RTGR + DP +E + YVPRDE +K S
Sbjct: 197 KSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLK----SK 252
Query: 304 SSLYSGLHALV----PFLEAILIDKD--LGFSSLSDIDKVFNEGIELPPELKDQPLWQKI 357
+L G +L P E+ K + F S D+ ++ GI+LP ++ +
Sbjct: 253 DALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTII---P 309
Query: 358 LPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKS 417
LP++ + G+ + +F P V + W+ +EEF RE +AG+NP I+ L + P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 418 TLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGS 477
LDP IYG S IT + ++ + T++EA+ ++LF++DYHD +PYV ++ Q+ +
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 478 TLYGSRALFFLNPDGTLRPLAIELTRPPLDG--KPQWKQVFTPSRHSTDSWLWTLAKAHF 535
Y +R + FL DGTL+P+AIEL+ P G QV P++ +S +W LAKA+
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 536 LVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLIL 595
+V+D+ YHQL+SHWL TH +EP++IA +R LS +HPI +LL PH+R M INA AR L
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 596 VNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISR 638
+NA G++ETTF P KYS+E SS +Y K W F +ALP DLI R
Sbjct: 547 INANGILETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant
Length = 839
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/523 (41%), Positives = 309/523 (59%), Gaps = 22/523 (4%)
Query: 127 GNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIV 185
G + + S G GA +++ E +L+ + L+ + N G + C+SW+ +
Sbjct: 77 GESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKL 136
Query: 186 DKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPE 245
K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDYDVYNDL P+
Sbjct: 137 YKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPD 196
Query: 246 IKE-LARPVLGGEE-HPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSA 303
E LARPVLGG PYPRR RTGR + DP +E + YVPRDE +K S
Sbjct: 197 KSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLK----SK 252
Query: 304 SSLYSGLHALV----PFLEAILIDKD--LGFSSLSDIDKVFNEGIELPPELKDQPLWQKI 357
+L G +L P E+ K + F S D+ ++ GI+LP ++ +
Sbjct: 253 DALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTII---P 309
Query: 358 LPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKS 417
LP++ + G+ + +F P V + W+ +EEF RE +AG+NP I+ L + P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 418 TLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGS 477
LDP IYG S IT + ++ + T++EA+ ++LF++DYHD +PYV ++ Q+ +
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 478 TLYGSRALFFLNPDGTLRPLAIELTRPPLDG--KPQWKQVFTPSRHSTDSWLWTLAKAHF 535
Y +R + FL DGTL+P+AIEL+ P G QV P++ +S +W LAKA+
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 536 LVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLIL 595
+V+D+ YHQL+SHWL TH +EP++IA +R LS +HPI +LL PH+R M INA AR L
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 596 VNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISR 638
+NA G+ ETTF P KYS+E SS +Y K W F +ALP DLI R
Sbjct: 547 INANGIAETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant
Length = 839
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/523 (41%), Positives = 310/523 (59%), Gaps = 22/523 (4%)
Query: 127 GNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIV 185
G + + S G GA +++ E +L+ + L+ + N G + C+SW+ +
Sbjct: 77 GESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKL 136
Query: 186 DKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPE 245
K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDYDVYNDL P+
Sbjct: 137 YKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPD 196
Query: 246 IKE-LARPVLGGEE-HPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSA 303
E LARPVLGG PYPRR RTGR + DP +E + YVPRDE +K S
Sbjct: 197 KSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLK----SK 252
Query: 304 SSLYSGLHALV----PFLEAILIDKD--LGFSSLSDIDKVFNEGIELPPELKDQPLWQKI 357
+L G +L P E+ K + F S D+ ++ GI+LP ++ +
Sbjct: 253 DALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTII---P 309
Query: 358 LPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKS 417
LP++ + G+ + +F P V + W+ +EEF RE +AG+NP I+ L + P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 418 TLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGS 477
LDP IYG S IT + ++ + T++EA+ ++LF++DYHD +PYV ++ Q+ +
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 478 TLYGSRALFFLNPDGTLRPLAIELTRPPLDG--KPQWKQVFTPSRHSTDSWLWTLAKAHF 535
Y +R + FL DGTL+P+AIEL+ P G QV P++ +S +W LAKA+
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 536 LVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLIL 595
+V+D+ YH+L+SHWL TH +EP++IA +R LS +HPI +LL PH+R M INA AR L
Sbjct: 487 IVNDSCYHELMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 596 VNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISR 638
+NA G++ETTF P KYS+E SS +Y K W F +ALP DLI R
Sbjct: 547 INANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant
Length = 839
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/523 (41%), Positives = 309/523 (59%), Gaps = 22/523 (4%)
Query: 127 GNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIV 185
G + + S G GA +++ E +L+ + L+ + N G + C+SW+ +
Sbjct: 77 GESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKL 136
Query: 186 DKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPE 245
K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDYDVYNDL P+
Sbjct: 137 YKSVRIFFANHTYVPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPD 196
Query: 246 IKE-LARPVLGGEE-HPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSA 303
E LARPVLGG PYPRR RTGR + DP +E + YVPRDE +K S
Sbjct: 197 KSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLK----SK 252
Query: 304 SSLYSGLHALV----PFLEAILIDKD--LGFSSLSDIDKVFNEGIELPPELKDQPLWQKI 357
+L G +L P E+ K + F S D+ ++ GI+LP ++ +
Sbjct: 253 DALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTII---P 309
Query: 358 LPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKS 417
LP++ + G+ + +F P V + W+ +EEF RE +AG+NP I+ L + P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 418 TLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGS 477
LDP IYG S IT + ++ + T++EA+ ++LF++DYHD +PYV ++ Q+ +
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 478 TLYGSRALFFLNPDGTLRPLAIELTRPPLDG--KPQWKQVFTPSRHSTDSWLWTLAKAHF 535
Y +R + FL DGTL+P+AIEL+ P G QV P++ +S +W LAKA+
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 536 LVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLIL 595
+V+D+ YHQL+SHWL TH +EP++IA +R LS +HPI +LL PH+R M INA AR L
Sbjct: 487 IVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 596 VNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISR 638
+NA G+ ETTF P KYS+E SS +Y K W F +ALP DLI R
Sbjct: 547 INANGIGETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant
Length = 839
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/523 (41%), Positives = 309/523 (59%), Gaps = 22/523 (4%)
Query: 127 GNIKYKAELKIPASFGDVGAILVESDQLTEMYLQDIVLDGLPN-GPVNLTCDSWIQPKIV 185
G + + S G GA +++ E +L+ + L+ + N G + C+SW+ +
Sbjct: 77 GESAFNIHFEWDGSMGIPGAFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKL 136
Query: 186 DKQKRIFFTNKSYLPSQTPNGLKRLRAEELNNLQGDGQGERKRHERIYDYDVYNDLALPE 245
K RIFF N +Y+PS+TP L R EEL +L+G+G GERK ++RIYDYDVYNDL P+
Sbjct: 137 YKSVRIFFANHTYVPSETPAPLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPD 196
Query: 246 IKE-LARPVLGGEE-HPYPRRCRTGRPKSFADPASESRSVSIYVPRDEAFADIKLGQFSA 303
E LARPVLGG PYPRR RTGR + DP +E + YVPRDE +K S
Sbjct: 197 KSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDPNTEKQGEVFYVPRDENLGHLK----SK 252
Query: 304 SSLYSGLHALV----PFLEAI--LIDKDLGFSSLSDIDKVFNEGIELPPELKDQPLWQKI 357
+L G +L P E+ L + F S D+ ++ GI+LP ++ +
Sbjct: 253 DALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRDVISTII---P 309
Query: 358 LPILFKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKS 417
LP++ + G+ + +F P V + W+ +EEF RE +AG+NP I+ L + P KS
Sbjct: 310 LPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKS 369
Query: 418 TLDPEIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGS 477
LDP IYG S IT + ++ + T++EA+ ++LF++DYHD +PYV ++ Q+ +
Sbjct: 370 NLDPAIYGDQSSKITADSLDLD---GYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSA 426
Query: 478 TLYGSRALFFLNPDGTLRPLAIELTRPPLDG--KPQWKQVFTPSRHSTDSWLWTLAKAHF 535
Y +R + FL DGTL+P+AIEL+ P G QV P++ +S +W LAKA+
Sbjct: 427 KTYATRTILFLREDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYV 486
Query: 536 LVHDTGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLIL 595
+V+D+ YH L+SHWL TH +EP++IA +R LS +HPI +LL PH+R M INA AR L
Sbjct: 487 IVNDSCYHALMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSL 546
Query: 596 VNAGGLVETTFFPGKYSMEFSSVIYDKQWRFDHEALPKDLISR 638
+NA G++ETTF P KYS+E SS +Y K W F +ALP DLI R
Sbjct: 547 INANGIIETTFLPSKYSVEMSSAVY-KNWVFTDQALPADLIKR 588
>pdb|3V98|A Chain A, S663d Stable-5-Lox
pdb|3V98|B Chain B, S663d Stable-5-Lox
pdb|3V99|A Chain A, S663d Stable-5-Lox In Complex With Arachidonic Acid
pdb|3V99|B Chain B, S663d Stable-5-Lox In Complex With Arachidonic Acid
Length = 691
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 388 WIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVN 447
W + FG + L G NP I+ ++LP K +TTE++E + +++
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELPEKL------------PVTTEMVECSLERQLSLE 291
Query: 448 EAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLD 507
+ ++Q +FI+D+ K L L + N + P+AI+L + P D
Sbjct: 292 QEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD 351
Query: 508 GKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKL 567
P +F PS D W LAK D HQ I+H LRTH E + IA R+L
Sbjct: 352 ENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQL 404
Query: 568 SAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVE 603
A+HPI +LL H R+T+ IN KAR L+ GL +
Sbjct: 405 PAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFD 440
>pdb|3V92|B Chain B, S663a Stable-5-Lox
pdb|3V92|A Chain A, S663a Stable-5-Lox
Length = 691
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 388 WIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVN 447
W + FG + L G NP I+ ++LP K +TTE++E + +++
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELPEKL------------PVTTEMVECSLERQLSLE 291
Query: 448 EAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLD 507
+ ++Q +FI+D+ K L L + N + P+AI+L + P D
Sbjct: 292 QEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD 351
Query: 508 GKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKL 567
P +F PS D W LAK D HQ I+H LRTH E + IA R+L
Sbjct: 352 ENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQL 404
Query: 568 SAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVE 603
A+HPI +LL H R+T+ IN KAR L+ GL +
Sbjct: 405 PAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFD 440
>pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase
pdb|3O8Y|B Chain B, Stable-5-Lipoxygenase
Length = 691
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 388 WIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTVN 447
W + FG + L G NP I+ ++LP K +TTE++E + +++
Sbjct: 244 WQEDLMFGYQFLNGANPVLIRRCTELPEKL------------PVTTEMVECSLERQLSLE 291
Query: 448 EAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLNPDGTLRPLAIELTRPPLD 507
+ ++Q +FI+D+ K L L + N + P+AI+L + P D
Sbjct: 292 QEVQQGNIFIVDFELLDGIDANKTDPCTLQFLAAPICLLYKNLANKIVPIAIQLNQIPGD 351
Query: 508 GKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANRKL 567
P +F PS D W LAK D HQ I+H LRTH E + IA R+L
Sbjct: 352 ENP----IFLPSDAKYD---WLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQL 404
Query: 568 SAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVE 603
A+HPI +LL H R+T+ IN KAR L+ GL +
Sbjct: 405 PAVHPIFKLLVAHVRFTIAINTKAREQLICECGLFD 440
>pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
pdb|3VF1|B Chain B, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests
A Mechanism For Ca-Regulation
Length = 698
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 117/256 (45%), Gaps = 27/256 (10%)
Query: 387 FWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELIEQEIGGLMTV 446
+W + FG + L G NP I+ +LP + E++E+ + T+
Sbjct: 250 YWRDDVWFGSQFLNGSNPEVIRRCDKLP------------ENFPVKNEMVEKLLDRGYTL 297
Query: 447 NEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGS-RALFFLNPDGTLRPLAIELTRPP 505
+A+K+ +FI DY +L + + E + LF+L + + P+AI+L + P
Sbjct: 298 EKAMKEGLIFITDY--KILEGIPTMDTPEDKRYITTPLGLFYLKNNDDIIPIAIQLYQQP 355
Query: 506 LDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWLRTHCCVEPYIIAANR 565
+ W TP + + W W +AK DT YHQ+I+H LR H +EP +++ R
Sbjct: 356 GENNSIW----TPLKDT--EWDWIMAKLWLRCADTQYHQMITHLLRCHLMMEPTAVSSWR 409
Query: 566 KLSAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVETTFFPGKYSMEFSSVIYDKQWR 625
L ++HP+ +LL PH + M IN R L+ GG + G + K +R
Sbjct: 410 NLPSVHPVWKLLYPHTKGIMAINTLGRNDLIPTGGAADKVLSIGGGG---QVTLMQKHYR 466
Query: 626 ---FDHEALPKDLISR 638
FD L KDL R
Sbjct: 467 SVTFDSYDLVKDLRQR 482
>pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
pdb|3DY5|C Chain C, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura
Homomalla
Length = 1066
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 111/249 (44%), Gaps = 38/249 (15%)
Query: 377 TPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELI 436
TP DR W + FG + L G NP + LP +T E +
Sbjct: 592 TPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHV 635
Query: 437 EQEIGGLMTVNEAIKQKKLFIID---------YHDALLPYVG-----KLRQIEGSTLYGS 482
+ ++E IK ++I+D Y +L +G L+ E Y +
Sbjct: 636 NASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCA 695
Query: 483 R--ALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDT 540
ALF++N G L P+AI++ + P P W TP H + W +AK V ++
Sbjct: 696 APLALFYVNKLGHLMPIAIQINQEPGPENPIW----TP--HEENEHDWMMAKFWLGVAES 749
Query: 541 GYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGG 600
+HQL +H LRTH E + ++ R L++ HPI +LL+PH + I+ R L+ +GG
Sbjct: 750 NFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGG 809
Query: 601 LVETTFFPG 609
+V+ + G
Sbjct: 810 IVDQSLSLG 818
>pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|B Chain B, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|C Chain C, Crystal Structure Of Delta413-417:gs Lox
pdb|3FG1|D Chain D, Crystal Structure Of Delta413-417:gs Lox
Length = 696
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 111/249 (44%), Gaps = 38/249 (15%)
Query: 377 TPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELI 436
TP DR W + FG + L G NP + LP +T E +
Sbjct: 222 TPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHV 265
Query: 437 EQEIGGLMTVNEAIKQKKLFIID---------YHDALLPYVG-----KLRQIEGSTLYGS 482
+ ++E IK ++I+D Y +L +G L+ E Y +
Sbjct: 266 NASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCA 325
Query: 483 R--ALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDT 540
ALF++N G L P+AI++ + P P W TP H + W +AK V ++
Sbjct: 326 APLALFYVNKLGHLMPIAIQINQEPGPENPIW----TP--HEENEHDWMMAKFWLGVAES 379
Query: 541 GYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGG 600
+HQL +H LRTH E + ++ R L++ HPI +LL+PH + I+ R L+ +GG
Sbjct: 380 NFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELIGSGG 439
Query: 601 LVETTFFPG 609
+V+ + G
Sbjct: 440 IVDQSLSLG 448
>pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
pdb|2FNQ|B Chain B, Insights From The X-Ray Crystal Structure Of Coral 8r-
Lipoxygenase: Calcium Activation Via A C2-Like Domain
And A Structural Basis Of Product Chirality
Length = 699
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 111/249 (44%), Gaps = 38/249 (15%)
Query: 377 TPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELI 436
TP DR W + FG + L G NP + LP +T E +
Sbjct: 225 TPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHV 268
Query: 437 EQEIGGLMTVNEAIKQKKLFIID---------YHDALLPYVG-----KLRQIEGSTLYGS 482
+ ++E IK ++I+D Y +L +G L+ E Y +
Sbjct: 269 NASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCA 328
Query: 483 R--ALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDT 540
ALF++N G L P+AI++ + P P W TP H + W +AK V ++
Sbjct: 329 APLALFYVNKLGHLMPIAIQINQEPGPENPIW----TP--HEENEHDWMMAKFWLGVAES 382
Query: 541 GYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGG 600
+HQL +H LRTH E + ++ R L++ HP+ +LL+PH + I+ R L+ +GG
Sbjct: 383 NFHQLNTHLLRTHLTTESFALSTWRNLASAHPVFKLLQPHIYGVLAIDTIGRKELIGSGG 442
Query: 601 LVETTFFPG 609
+V+ + G
Sbjct: 443 IVDQSLSLG 451
>pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|B Chain B, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|C Chain C, Crystal Structure Of Delta413-417:gs I805a Lox
pdb|3FG4|D Chain D, Crystal Structure Of Delta413-417:gs I805a Lox
Length = 696
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 377 TPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELI 436
TP DR W + FG + L G NP + LP +T E +
Sbjct: 222 TPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHV 265
Query: 437 EQEIGGLMTVNEAIKQKKLFIID---------YHDALLPYVG-----KLRQIEGSTLYGS 482
+ ++E IK ++I+D Y +L +G L+ E Y +
Sbjct: 266 NASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCA 325
Query: 483 R--ALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDT 540
ALF++N G L P+AI++ + P P W TP H + W +AK V ++
Sbjct: 326 APLALFYVNKLGHLMPIAIQINQEPGPENPIW----TP--HEENEHDWMMAKFWLGVAES 379
Query: 541 GYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGG 600
+HQL +H LRTH E + ++ R L++ HPI +LL+PH + I+ R L +GG
Sbjct: 380 NFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELAGSGG 439
Query: 601 LVETTFFPG 609
+V+ + G
Sbjct: 440 IVDQSLSLG 448
>pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|B Chain B, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|C Chain C, Crystal Structure Of Delta413-417:gs I805w Lox
pdb|3FG3|D Chain D, Crystal Structure Of Delta413-417:gs I805w Lox
Length = 696
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 110/249 (44%), Gaps = 38/249 (15%)
Query: 377 TPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAITTELI 436
TP DR W + FG + L G NP + LP +T E +
Sbjct: 222 TPNMADR----WHEDRWFGYQFLNGANPVILTRCDALP------------SNFPVTNEHV 265
Query: 437 EQEIGGLMTVNEAIKQKKLFIID---------YHDALLPYVG-----KLRQIEGSTLYGS 482
+ ++E IK ++I+D Y +L +G L+ E Y +
Sbjct: 266 NASLDRGKNLDEEIKDGHIYIVDFKVLVGAKSYGGPVLEDIGYKVPDHLKHDEADIRYCA 325
Query: 483 R--ALFFLNPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDT 540
ALF++N G L P+AI++ + P P W TP H + W +AK V ++
Sbjct: 326 APLALFYVNKLGHLMPIAIQINQEPGPENPIW----TP--HEENEHDWMMAKFWLGVAES 379
Query: 541 GYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGG 600
+HQL +H LRTH E + ++ R L++ HPI +LL+PH + I+ R L +GG
Sbjct: 380 NFHQLNTHLLRTHLTTESFALSTWRNLASAHPIFKLLQPHIYGVLAIDTIGRKELWGSGG 439
Query: 601 LVETTFFPG 609
+V+ + G
Sbjct: 440 IVDQSLSLG 448
>pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase
Length = 662
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 112/250 (44%), Gaps = 27/250 (10%)
Query: 362 FKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDP 421
+KT+ + + +F + R + W + FG + L G NP ++ QLP + P
Sbjct: 197 WKTLDDFNR-IFWCGRSKLARRVRDSWQEDSLFGYQFLNGANPMLLRRSVQLPARLVFPP 255
Query: 422 EIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYG 481
+ EL Q + + +K LF D+ ALL + K I Y
Sbjct: 256 GM---------EELQAQ-------LEKELKAGTLFEADF--ALLDNI-KANVILYCQQYL 296
Query: 482 SRALFFL--NPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHD 539
+ L L PDG L P+ I+L P + P +F P+ +W LAK D
Sbjct: 297 AAPLVMLKLQPDGKLMPMVIQLHLPKIGSSP--PPLFLPTDPPM---VWLLAKCWVRSSD 351
Query: 540 TGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAG 599
H+L SH LR H E + +A R L ++HP+ +L+ PH RYT+EIN +AR LV+
Sbjct: 352 FQVHELNSHLLRGHLMAEVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDF 411
Query: 600 GLVETTFFPG 609
G+ + G
Sbjct: 412 GIFDQIMSTG 421
>pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
pdb|2P0M|B Chain B, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase
Length = 662
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 112/250 (44%), Gaps = 27/250 (10%)
Query: 362 FKTVSNTGKEVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDP 421
+KT+ + + +F + R + W + FG + L G NP ++ QLP + P
Sbjct: 197 WKTLDDFNR-IFWCGRSKLARRVRDSWQEDSLFGYQFLNGANPMLLRRSVQLPARLVFPP 255
Query: 422 EIYGPPESAITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYG 481
+ EL Q + + +K LF D+ ALL + K I Y
Sbjct: 256 GM---------EELQAQ-------LEKELKAGTLFEADF--ALLDNI-KANVILYCQQYL 296
Query: 482 SRALFFL--NPDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHD 539
+ L L PDG L P+ I+L P + P +F P+ +W LAK D
Sbjct: 297 AAPLVMLKLQPDGKLMPMVIQLHLPKIGSSP--PPLFLPTDPPM---VWLLAKCWVRSSD 351
Query: 540 TGYHQLISHWLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAG 599
H+L SH LR H E + +A R L ++HP+ +L+ PH RYT+EIN +AR LV+
Sbjct: 352 FQVHELNSHLLRGHLMAEVFTVATMRCLPSIHPVFKLIVPHLRYTLEINVRARNGLVSDF 411
Query: 600 GLVETTFFPG 609
G+ + G
Sbjct: 412 GIFDQIMSTG 421
>pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|B Chain B, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|C Chain C, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
pdb|3RDE|D Chain D, Crystal Structure Of The Catalytic Domain Of Porcine
Leukocyte 12- Lipoxygenase
Length = 573
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 110/240 (45%), Gaps = 26/240 (10%)
Query: 372 VFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESAI 431
+F + +R + W + FG + L G NP ++ +LP + + PP
Sbjct: 117 IFWSGQSKLAERVRDSWKEDALFGYQFLNGTNPMLLRHSVELPAR------LKFPPGMEE 170
Query: 432 TTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFL--N 489
+E+E+ G LF D+ +LL + K I S Y + L L
Sbjct: 171 LQAQLEKELQG----------GTLFEADF--SLLDGI-KANVILSSQQYLAVPLVMLKLQ 217
Query: 490 PDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHW 549
PDG L P+ I+L + P +G P +F P+ +W LAK D H+L SH
Sbjct: 218 PDGKLLPMVIQL-QLPREGSPL-PPLFLPTDPPM---VWLLAKCWVRSSDFQLHELHSHL 272
Query: 550 LRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVETTFFPG 609
LR H E +A R L ++HPI +LL PHFRYTMEIN +AR LV+ G+ + G
Sbjct: 273 LRGHLMAEVIAVATMRCLPSIHPIFKLLIPHFRYTMEINVRARNGLVSDLGIFDQVVSTG 332
>pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
pdb|3D3L|B Chain B, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of
Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp
Target)
Length = 541
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 102/241 (42%), Gaps = 26/241 (10%)
Query: 371 EVFRFDTPETVDRDKFFWIRNEEFGRETLAGLNPYSIKLLSQLPLKSTLDPEIYGPPESA 430
++F ++ + W +E F + L G NP ++ + LP + L P
Sbjct: 51 QIFWGQKSALAEKVRQCWQDDELFSYQFLNGANPMLLRRSTSLPSRLVL------PSGME 104
Query: 431 ITTELIEQEIGGLMTVNEAIKQKKLFIIDYHDALLPYVGKLRQIEGSTLYGSRALFFLN- 489
+E+E+ N ++ + ++D A + I G Y + L L
Sbjct: 105 ELRAQLEKELQ-----NGSLFEADFILLDGIPANV--------IRGEKQYLAAPLVMLKM 151
Query: 490 -PDGTLRPLAIELTRPPLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISH 548
P+G L+P+ I++ P +F PS W LAK+ D H++ H
Sbjct: 152 EPNGKLQPMVIQIQPPNPSSPT--PTLFLPSDPPLA---WLLAKSWVRNSDFQLHEIQYH 206
Query: 549 WLRTHCCVEPYIIAANRKLSAMHPINRLLKPHFRYTMEINAKARLILVNAGGLVETTFFP 608
L TH E +A R L +HPI + L PH RYTMEIN +AR L++ GG+ +
Sbjct: 207 LLNTHLVAEVIAVATMRCLPGLHPIFKFLIPHIRYTMEINTRARTQLISDGGIFDKAVST 266
Query: 609 G 609
G
Sbjct: 267 G 267
>pdb|2B8E|A Chain A, Copa Atp Binding Domain
pdb|2B8E|B Chain B, Copa Atp Binding Domain
pdb|2B8E|C Chain C, Copa Atp Binding Domain
Length = 273
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 137 IPASFGDVGAILVESDQLTEMY---LQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFF 193
I A G V I+ SD L E +Q++ G+ G + T D+W + + ++ +
Sbjct: 127 IVARNGRVEGIIAVSDTLKESAKPAVQELKRXGIKVGXI--TGDNWRSAEAISRELNLDL 184
Query: 194 TNKSYLPSQTPNGLKRLRAEELNNLQGDG 222
LP Q +K+L+A+E+ GDG
Sbjct: 185 VIAEVLPHQKSEEVKKLQAKEVVAFVGDG 213
>pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial
P-Type Atpase Copper Transporter Copa
pdb|3J09|B Chain B, High Resolution Helical Reconstruction Of The Bacterial
P-Type Atpase Copper Transporter Copa
Length = 723
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 137 IPASFGDVGAILVESDQLTEMY---LQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFF 193
I A G V I+ SD L E +Q++ G+ G + T D+W + + ++ +
Sbjct: 519 IVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMI--TGDNWRSAEAISRELNLDL 576
Query: 194 TNKSYLPSQTPNGLKRLRAEELNNLQGDG 222
LP Q +K+L+A+E+ GDG
Sbjct: 577 VIAEVLPHQKSEEVKKLQAKEVVAFVGDG 605
>pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial
P-Type Atpase Copper Transporter Copa
pdb|3J08|B Chain B, High Resolution Helical Reconstruction Of The Bacterial
P-Type Atpase Copper Transporter Copa
Length = 645
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 137 IPASFGDVGAILVESDQLTEMY---LQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFF 193
I A G V I+ SD L E +Q++ G+ G + T D+W + + ++ +
Sbjct: 441 IVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMI--TGDNWRSAEAISRELNLDL 498
Query: 194 TNKSYLPSQTPNGLKRLRAEELNNLQGDG 222
LP Q +K+L+A+E+ GDG
Sbjct: 499 VIAEVLPHQKSEEVKKLQAKEVVAFVGDG 527
>pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A
Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg
pdb|3A1C|B Chain B, Crystal Structure Of The P- And N-Domains Of Copa, A
Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg
pdb|3A1D|A Chain A, Crystal Structure Of The P- And N-domains Of Copa, A
Copper- Transporting P-type Atpase, Bound With Adp-mg
pdb|3A1D|B Chain B, Crystal Structure Of The P- And N-domains Of Copa, A
Copper- Transporting P-type Atpase, Bound With Adp-mg
Length = 287
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 137 IPASFGDVGAILVESDQLTEMY---LQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFF 193
I A G V I+ SD L E +Q++ G+ G + T D+W + + ++ +
Sbjct: 147 IVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMI--TGDNWRSAEAISRELNLDL 204
Query: 194 TNKSYLPSQTPNGLKRLRAEELNNLQGDG 222
LP Q +K+L+A+E+ GDG
Sbjct: 205 VIAEVLPHQKSEEVKKLQAKEVVAFVGDG 233
>pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln
Mutant Copa, A Copper-Transporting P-Type Atpase, Bound
With Amppcp-Mg
pdb|3A1E|B Chain B, Crystal Structure Of The P- And N-Domains Of His462gln
Mutant Copa, A Copper-Transporting P-Type Atpase, Bound
With Amppcp-Mg
Length = 287
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 137 IPASFGDVGAILVESDQLTEMY---LQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFF 193
I A G V I+ SD L E +Q++ G+ G + T D+W + + ++ +
Sbjct: 147 IVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMI--TGDNWRSAEAISRELNLDL 204
Query: 194 TNKSYLPSQTPNGLKRLRAEELNNLQGDG 222
LP Q +K+L+A+E+ GDG
Sbjct: 205 VIAEVLPHQKSEEVKKLQAKEVVAFVGDG 233
>pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From
Archaeoglobus Fulgidus
Length = 128
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 136 KIPASFGDVGAILVESDQLTEMYLQDIVLDGLPNGPVNLTCDSWIQPKIVDKQKRIFFTN 195
K+ A D L + + + +Q++ G+ G + T D+W + + ++ +
Sbjct: 8 KVTAVIFDKTGTLTKLKESAKPAVQELKRXGIKVGXI--TGDNWRSAEAISRELNLDLVI 65
Query: 196 KSYLPSQTPNGLKRLRAEELNNLQGDG 222
LP Q +K+L+A+E+ GDG
Sbjct: 66 AEVLPHQKSEEVKKLQAKEVVAFVGDG 92
>pdb|3N9T|A Chain A, Cryatal Structure Of Hydroxyquinol 1,2-Dioxygenase From
Pseudomonas Putida Dll-E4
Length = 290
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 14/69 (20%)
Query: 497 LAIELTRP-----PLDGKPQWKQVFTPSRHSTDSWLWTLAKAHFLVHDTGYHQLISHWLR 551
AI+ T P P DG P + + +RH+ W A HF++ GY +L++H
Sbjct: 184 FAIQTTVPVCYPIPTDG-PVGEMLDAANRHA-----WRPAHLHFMIQAPGYRKLVTHLFN 237
Query: 552 THCCVEPYI 560
+ +PY+
Sbjct: 238 SD---DPYL 243
>pdb|3L3B|A Chain A, Crystal Structure Of Isoprenoid Biosynthesis Protein With
Amidotransferase-Like Domain From Ehrlichia Chaffeensis
At 1.90a Resolution
pdb|3L3B|B Chain B, Crystal Structure Of Isoprenoid Biosynthesis Protein With
Amidotransferase-Like Domain From Ehrlichia Chaffeensis
At 1.90a Resolution
Length = 242
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 24/160 (15%)
Query: 181 QPKIVDKQK-------RIFFTNKSYLPSQTPNGLKRLRAEELNNLQG-DGQGERKRHERI 232
Q ++VD +K R + + + ++++R EE + L G G K +
Sbjct: 67 QKQVVDHKKKESVGEVRNILVESARIARGSVYDIEQIRVEEFDMLVIPGGYGVAKNFSNL 126
Query: 233 YDYDVYNDLALPEIKELARPVLGGEEHPYPRRCRTGRPKSFADPASESRSVSIYVPRDEA 292
+D D ND LPE K R ++ P C + PA V + + +D A
Sbjct: 127 FDEDKENDYILPEFKNAVREFYNAKK-PIGAVCIS--------PA-----VVVALLKDIA 172
Query: 293 FADIKLGQFSASSL--YSGLHALVPFLEAILIDKDLGFSS 330
+ +G+ S + G+H P ++++ D + FS
Sbjct: 173 KVKVTIGEDSNGLIDKMGGVHVDCPTIKSVKDDVNRIFSC 212
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,228,456
Number of Sequences: 62578
Number of extensions: 900524
Number of successful extensions: 1939
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1771
Number of HSP's gapped (non-prelim): 49
length of query: 638
length of database: 14,973,337
effective HSP length: 105
effective length of query: 533
effective length of database: 8,402,647
effective search space: 4478610851
effective search space used: 4478610851
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)