BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006630
(638 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FH87|PP447_ARATH Putative pentatricopeptide repeat-containing protein At5g65820
OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1
Length = 637
Score = 850 bits (2195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/611 (65%), Positives = 501/611 (81%), Gaps = 10/611 (1%)
Query: 17 RFSFAPRPNTTTSHVESTATTTNQLNSNLVCLKTKEDDCKCNNTTDTHGSHNEFSHDVEK 76
RF R + +E +N + LVCL+ K +N + ++EF+ DVEK
Sbjct: 34 RFDLIHRSFHVSRALEDNFRRSNGIG--LVCLE------KSHNDRTKNSKYDEFASDVEK 85
Query: 77 IFRILKKFHSRLPKLELALQHSGVVLRPGLTERVINRCGDAGNLGYRYYMWASKQPNYVH 136
+RIL+KFHSR+PKLELAL SGV LRPGL ERV+NRCGDAGNLGYR+++WA+KQP Y H
Sbjct: 86 SYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCH 145
Query: 137 SYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEV 196
S +VY++++K LSKMR+FGAVW L+EEMRKE PQLI E+FV+L++RFASA MVKKAIEV
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEV 205
Query: 197 LDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERFKPSLRHFTSLLYGWCKE 256
LDEMPK+G EPDE+VFGCLLDALCK+ SVK+AAKLF++MR RF +LR+FTSLLYGWC+
Sbjct: 206 LDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRV 265
Query: 257 GKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSY 316
GK++EAKYVLVQM +AGFEPDIV Y NLLSGYA GKM DA++LL++MRR+G +PNAN Y
Sbjct: 266 GKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCY 325
Query: 317 TVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQ 376
TVLIQALC++++MEEA + FVEMER CEADVVTYT L+SGFCK KID+CY +LD MI+
Sbjct: 326 TVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIK 385
Query: 377 RGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKE 436
+G++P++LTY+HIM+AHEKKE EEC+ELM +MR+I PD+ YNVVIRLACKLGE+KE
Sbjct: 386 KGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKE 445
Query: 437 AVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKAL 496
AV +WNEME LSPG D+FV+M++G QGCL+EA ++FKEMV RGL S QYGTLK L
Sbjct: 446 AVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLL 505
Query: 497 LNSLLRAQKVEMAKDVWSCIVTKG-CELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDAD 555
LN++L+ +K+EMAKDVWSCI +KG CELNV +WTIWIH+LFS G+ KEACSYC++M++ D
Sbjct: 506 LNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMD 565
Query: 556 VMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRKMAAERQITFKMYKRRGERDLKEKAKKQ 615
MPQPDTFAKLM+GLKKLYNR+ A EITEKVR MAAER+++FKMYKRRG +DL EKAK +
Sbjct: 566 FMPQPDTFAKLMKGLKKLYNREFAGEITEKVRNMAAEREMSFKMYKRRGVQDLTEKAKSK 625
Query: 616 VDGRKRRARQR 626
D R+ + +QR
Sbjct: 626 QD-REGKKKQR 635
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/578 (67%), Positives = 486/578 (84%), Gaps = 7/578 (1%)
Query: 68 NEFSHDVEKIFRILKKFHSRLPKLELALQHSGVVLRPGLTERVINRCGDAGNLGYRYYMW 127
+EF+ +VEKI+RIL+ HSR+PKLELAL SG+ LRPGL RV++RCGDAGNLGYR+++W
Sbjct: 61 DEFAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLW 120
Query: 128 ASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASA 187
A+KQP Y HSY+V ++++ LSKMR+FGAVW L+EEMRK P+LI E+FV+LMRRFASA
Sbjct: 121 ATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASA 180
Query: 188 RMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERFKPSLRHFT 247
MVKKA+EVLDEMPKYG EPDE+VFGCLLDALCKN SVKEA+K+F++MRE+F P+LR+FT
Sbjct: 181 NMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFT 240
Query: 248 SLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRK 307
SLLYGWC+EGKL+EAK VLVQMK+AG EPDIVV+ NLLSGYA GKM DA++L+ +MR++
Sbjct: 241 SLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKR 300
Query: 308 GCDPNANSYTVLIQALCRMEK-MEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDR 366
G +PN N YTVLIQALCR EK M+EA R FVEMER GCEAD+VTYT LISGFCK ID+
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDK 360
Query: 367 CYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIR 426
Y +LD M ++G++P+Q+TY+ IM+AHEKKE+ EEC+EL+ +M++ GC PD+ YNVVIR
Sbjct: 361 GYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIR 420
Query: 427 LACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLS 486
LACKLGE+KEAV +WNEMEA LSPG D+FV+M++GF QG LIEAC +FKEMV RG+ S
Sbjct: 421 LACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFS 480
Query: 487 APQYGTLKALLNSLLRAQKVEMAKDVWSCIV--TKGCELNVYAWTIWIHSLFSNGHVKEA 544
APQYGTLK+LLN+L+R K+EMAKDVWSCI T CELNV AWTIWIH+L++ GHVKEA
Sbjct: 481 APQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEA 540
Query: 545 CSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRKMAAERQITFKMYKRRG 604
CSYCLDMM+ D+MPQP+T+AKLM+GL KLYNR IAAEITEKV KMA+ER+++FKMYK++G
Sbjct: 541 CSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVVKMASEREMSFKMYKKKG 600
Query: 605 ERDLKEKAKKQVDGRKRRA---RQRRWG-GGRSKAKIL 638
E DL EKAK + + ++ QR G G RS+AK L
Sbjct: 601 EEDLIEKAKPKGNKEGKKKGTDHQRYKGRGERSRAKAL 638
>sp|Q9FVX2|PP129_ARATH Pentatricopeptide repeat-containing protein At1g77360,
mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2
SV=2
Length = 517
Score = 268 bits (686), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 155/469 (33%), Positives = 260/469 (55%), Gaps = 8/469 (1%)
Query: 33 STATTTNQLNSNLVCLKTKEDDCKCNNTTDTHGSHNEFSHDVEKIFRILKKFHSRLPKLE 92
S+AT + N + + + C + + S +E DV + + + K P+L
Sbjct: 27 SSATVWVRFNMTIRIINRQSRFCCKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLV 86
Query: 93 L--ALQHSGVVLRPGLTERVINRCGDAGNLGYRYYMWASKQPNYVHSYDVYRALIKSLSK 150
L AL SG+ + + E V+NR +AG L YR++ W+ KQ +Y HS Y +I+S +K
Sbjct: 87 LDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAK 146
Query: 151 MRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEF 210
+R++ +W L+ MRK+K ++ E F I+MR++A A+ V +AI + M KY P+
Sbjct: 147 IRQYKLMWDLINAMRKKK--MLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLV 204
Query: 211 VFGCLLDALCKNSSVKEAAKLFDEMRERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMK 270
F LL ALCK+ +V++A ++F+ MR+RF P + ++ LL GW KE L +A+ V +M
Sbjct: 205 AFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMI 264
Query: 271 DAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKME 330
DAG PDIV Y+ ++ + G++ +A +++ M C P Y+VL+ ++E
Sbjct: 265 DAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLE 324
Query: 331 EANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIM 390
EA F+EMERSG +ADV + +LI FCK+ ++ Y +L M +G+ PN + +I+
Sbjct: 325 EAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKS-CNII 383
Query: 391 LAHE-KKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASL 449
L H ++ E +E ++ +M K+ C PD Y +VI++ C+ E++ A VW M +
Sbjct: 384 LRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGV 442
Query: 450 SPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLL-SAPQYGTLKALL 497
P +F V+++G + +AC +EM+ G+ S +G L+ LL
Sbjct: 443 FPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLL 491
Score = 134 bits (336), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 181/381 (47%), Gaps = 4/381 (1%)
Query: 212 FGCLLDALCKNSSVKEAAKLFDEMRERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKD 271
+ ++++ K K L + MR++ ++ F ++ + + K+ EA Y M+
Sbjct: 137 YHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEK 196
Query: 272 AGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEE 331
P++V +N LLS + + A E+ + MR + P++ +Y++L++ + + +
Sbjct: 197 YDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFT-PDSKTYSILLEGWGKEPNLPK 255
Query: 332 ANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIML 391
A F EM +GC D+VTY+ ++ CK+ ++D I+ SM P Y ++
Sbjct: 256 AREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVH 315
Query: 392 AHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSP 451
+ + LEE V+ EM + G DV+ +N +I CK +K V EM++ ++P
Sbjct: 316 TYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTP 375
Query: 452 GTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKD 511
+ S +++ + +G EA + F++M+ + P T ++ +++E A
Sbjct: 376 NSKSCNIILRHLIERGEKDEAFDVFRKMIK---VCEPDADTYTMVIKMFCEKKEMETADK 432
Query: 512 VWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLK 571
VW + KG +++ +++ I+ L ++AC +M++ + P TF +L + L
Sbjct: 433 VWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLI 492
Query: 572 KLYNRQIAAEITEKVRKMAAE 592
K + + EK+ + E
Sbjct: 493 KEEREDVLKFLNEKMNVLVNE 513
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 16/251 (6%)
Query: 130 KQPNYVHSYDVYRALIKS------------LSKMRKFGAVWALMEEMRKEKPQLI--TTE 175
K+PN + +V+R +I + + + K G V + +R P + TT
Sbjct: 249 KEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF 308
Query: 176 VFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM 235
++ +L+ + + +++A++ EM + G + D VF L+ A CK + +K ++ EM
Sbjct: 309 IYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 368
Query: 236 RER-FKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKM 294
+ + P+ + +L + G+ EA V +M EPD Y ++ + + +M
Sbjct: 369 KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTMVIKMFCEKKEM 427
Query: 295 TDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTL 354
A ++ K MR+KG P+ ++++VLI LC ++A EM G VT+ L
Sbjct: 428 ETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Query: 355 ISGFCKSRKID 365
K + D
Sbjct: 488 RQLLIKEERED 498
>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein At1g71060,
mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2
SV=1
Length = 510
Score = 265 bits (678), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 142/430 (33%), Positives = 240/430 (55%), Gaps = 14/430 (3%)
Query: 59 NTTDTHGSHNEFSHDVEKIFRILKKFHSRLPKLELALQHSGVVLRPGLTERVINRCGDAG 118
++ +T S N+ S D E+I +IL KF K+E L + V L P L E V+ + +AG
Sbjct: 51 SSVETQVSANDASQDAERICKILTKFTD--SKVETLLNEASVKLSPALIEEVLKKLSNAG 108
Query: 119 NLGYRYYMWASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFV 178
L + WA Q + H+ Y ALI+SL K+++F +W+L+++M+ +K L++ E F
Sbjct: 109 VLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKK--LLSKETFA 166
Query: 179 ILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRE- 237
++ RR+A AR VK+AI +M ++G + + F +LD L K+ +V +A K+FD+M++
Sbjct: 167 LISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKK 226
Query: 238 RFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDA 297
RF+P ++ +T LL GW +E L+ V +MKD GFEPD+V Y +++ + + K +A
Sbjct: 227 RFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEA 286
Query: 298 FELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISG 357
EM ++ C P+ + + LI L +K+ +A F + SG + TY L+
Sbjct: 287 IRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGA 346
Query: 358 FCKSRKIDRCYEILDSMIQRGILPNQLTY---LHIMLAHEKKEELEECVELMGEMRKIGC 414
+C S++++ Y+ +D M +G+ PN TY LH ++ ++ +E E + M C
Sbjct: 347 YCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM------SC 400
Query: 415 VPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACE 474
P VS Y +++R+ C L A+ +W+EM+ + PG F ++ + L EACE
Sbjct: 401 EPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACE 460
Query: 475 YFKEMVGRGL 484
YF EM+ G+
Sbjct: 461 YFNEMLDVGI 470
Score = 142 bits (359), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 144/281 (51%), Gaps = 13/281 (4%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKEK--PQLITTEVFVILMRRFASARMVKKAIEVLD 198
+ ++ +LSK R G + ++M+K++ P + + + IL+ + + + EV
Sbjct: 200 FNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKS---YTILLEGWGQELNLLRVDEVNR 256
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERF-KPSLRHFTSLLYGWCKEG 257
EM G EPD +G +++A CK +EA + F+EM +R KPS F SL+ G E
Sbjct: 257 EMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEK 316
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYT 317
KL +A + K +GF + YN L+ Y +M DA++ + EMR KG PNA +Y
Sbjct: 317 KLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYD 376
Query: 318 VLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQR 377
+++ L RM++ +EA + M CE V TY ++ FC ++D +I D M +
Sbjct: 377 IILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGK 433
Query: 378 GILP--NQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVP 416
G+LP + + L L HE K L+E E EM +G P
Sbjct: 434 GVLPGMHMFSSLITALCHENK--LDEACEYFNEMLDVGIRP 472
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 5/179 (2%)
Query: 129 SKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASAR 188
SK + Y AL+ + ++ + ++EMR K + I++ +
Sbjct: 328 SKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRL-KGVGPNARTYDIILHHLIRMQ 386
Query: 189 MVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFT 247
K+A EV M CEP + ++ C + A K++DEM+ + P + F+
Sbjct: 387 RSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFS 443
Query: 248 SLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRR 306
SL+ C E KL EA +M D G P +++ L G+ +L+ +M R
Sbjct: 444 SLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDR 502
>sp|Q9LZP3|PP293_ARATH Pentatricopeptide repeat-containing protein At3g62470,
mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2
SV=1
Length = 599
Score = 241 bits (615), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/437 (31%), Positives = 233/437 (53%), Gaps = 5/437 (1%)
Query: 51 KEDDCKCNNTTDTHGSHNEFS---HDVEKIFRILKKFHSRLPKLELALQHSGVVLRPGLT 107
+E + +C+N +T S E S +VE++ +++ + + +E L + L L
Sbjct: 105 EEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLI 164
Query: 108 ERVINRCGDAGNLGYRYYMWASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKE 167
V+ R A +R++ WA+++ + H Y +++ L+K R+F + +++EEM +
Sbjct: 165 VEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTK 224
Query: 168 KPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKE 227
L+T E F I M+ FA+A+ KKA+ + + M KY + CLLD+L + KE
Sbjct: 225 G--LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKE 282
Query: 228 AAKLFDEMRERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSG 287
A LFD+++ERF P++ +T LL GWC+ L+EA + M D G +PDIV +N +L G
Sbjct: 283 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEG 342
Query: 288 YAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEAD 347
+ K +DA +L M+ KG PN SYT++I+ C+ ME A F +M SG + D
Sbjct: 343 LLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402
Query: 348 VVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMG 407
YT LI+GF +K+D YE+L M ++G P+ TY ++ ++ E +
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYN 462
Query: 408 EMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQG 467
+M + P + +N++++ + VW EM + P +S+ V++ G +G+G
Sbjct: 463 KMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEG 522
Query: 468 CLIEACEYFKEMVGRGL 484
EAC Y +EM+ +G+
Sbjct: 523 KSREACRYLEEMLDKGM 539
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 139/281 (49%), Gaps = 5/281 (1%)
Query: 144 LIKSLSKMRKFGAVWALMEEMRKE-KPQLITTEVFVILMRRFASARMVKKAIEVLDEMPK 202
L+ SL + + L +++++ P ++T + +L+ + R + +A + ++M
Sbjct: 270 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMT---YTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 203 YGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERFK-PSLRHFTSLLYGWCKEGKLVE 261
G +PD +L+ L ++ +A KLF M+ + P++R +T ++ +CK+ +
Sbjct: 327 QGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 262 AKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQ 321
A M D+G +PD VY L++G+ K+ +ELLKEM+ KG P+ +Y LI+
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 322 ALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILP 381
+ + E A R + +M ++ E + T+ ++ + +R + + + MI++GI P
Sbjct: 447 LMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICP 506
Query: 382 NQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYN 422
+ +Y ++ + + E + EM G + +YN
Sbjct: 507 DDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYN 547
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 104/252 (41%), Gaps = 6/252 (2%)
Query: 140 VYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDE 199
+ +++ L + RK L M+ + P + I++R F ++ AIE D+
Sbjct: 335 AHNVMLEGLLRSRKKSDAIKLFHVMKSKGP-CPNVRSYTIMIRDFCKQSSMETAIEYFDD 393
Query: 200 MPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEGK 258
M G +PD V+ CL+ + +L EM+E+ P + + +L+ +
Sbjct: 394 MVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKM 453
Query: 259 LVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTV 318
A + +M EP I +N ++ Y + +EM +KG P+ NSYTV
Sbjct: 454 PEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTV 513
Query: 319 LIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRG 378
LI+ L K EA R EM G + ++ Y + F + + EI + + QR
Sbjct: 514 LIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP----EIFEELAQRA 569
Query: 379 ILPNQLTYLHIM 390
+ I
Sbjct: 570 KFSGKFAAAEIF 581
>sp|Q3EAF8|PP294_ARATH Pentatricopeptide repeat-containing protein At3g62540,
mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2
SV=1
Length = 599
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 234/437 (53%), Gaps = 5/437 (1%)
Query: 51 KEDDCKCNNTTDTHGSHNEFS---HDVEKIFRILKKFHSRLPKLELALQHSGVVLRPGLT 107
+E + +C+N +T S E S +VE++ +++ + + +E L + L L
Sbjct: 105 EEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLI 164
Query: 108 ERVINRCGDAGNLGYRYYMWASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKE 167
V+ R A +R++ WA+++ + H+ Y +++ L+K R+F + +++EEM +
Sbjct: 165 VEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTK 224
Query: 168 KPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKE 227
L+T E F I M+ FA+A+ KKA+ + + M KY + CLLD+L + KE
Sbjct: 225 G--LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKE 282
Query: 228 AAKLFDEMRERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSG 287
A LFD+++ERF P++ +T LL GWC+ L+EA + M D G +PDIV +N +L G
Sbjct: 283 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEG 342
Query: 288 YAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEAD 347
+ K +DA +L M+ KG PN SYT++I+ C+ ME A F +M SG + D
Sbjct: 343 LLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402
Query: 348 VVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMG 407
YT LI+GF +K+D YE+L M ++G P+ TY ++ ++ E +
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYN 462
Query: 408 EMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQG 467
+M + P + +N++++ + VW+EM + P +S+ V++ G + +G
Sbjct: 463 KMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEG 522
Query: 468 CLIEACEYFKEMVGRGL 484
EAC Y +EM+ +G+
Sbjct: 523 KSREACRYLEEMLDKGM 539
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 139/281 (49%), Gaps = 5/281 (1%)
Query: 144 LIKSLSKMRKFGAVWALMEEMRKE-KPQLITTEVFVILMRRFASARMVKKAIEVLDEMPK 202
L+ SL + + L +++++ P ++T + +L+ + R + +A + ++M
Sbjct: 270 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMT---YTVLLNGWCRVRNLIEAARIWNDMID 326
Query: 203 YGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERFK-PSLRHFTSLLYGWCKEGKLVE 261
+G +PD +L+ L ++ +A KLF M+ + P++R +T ++ +CK+ +
Sbjct: 327 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 386
Query: 262 AKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQ 321
A M D+G +PD VY L++G+ K+ +ELLKEM+ KG P+ +Y LI+
Sbjct: 387 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 446
Query: 322 ALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILP 381
+ + E R + +M ++ E + T+ ++ + +R + + D MI++GI P
Sbjct: 447 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 506
Query: 382 NQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYN 422
+ +Y ++ + + E + EM G + +YN
Sbjct: 507 DDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 547
>sp|Q9LEQ7|PP382_ARATH Pentatricopeptide repeat-containing protein At5g14820,
mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2
SV=1
Length = 598
Score = 238 bits (606), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 233/437 (53%), Gaps = 5/437 (1%)
Query: 51 KEDDCKCNNTTDTHGSHNEFS---HDVEKIFRILKKFHSRLPKLELALQHSGVVLRPGLT 107
+E + +C+N +T S E S +VE++ +++ + + +E L + L L
Sbjct: 104 EEVESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLI 163
Query: 108 ERVINRCGDAGNLGYRYYMWASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKE 167
V+ R A +R++ WA+++ + H Y +++ L+K R+F + +++EEM +
Sbjct: 164 VEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTK 223
Query: 168 KPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKE 227
L+T E F I M+ FA+A+ KKA+ + + M KY + CLLD+L + KE
Sbjct: 224 G--LLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKE 281
Query: 228 AAKLFDEMRERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSG 287
A LFD+++ERF P++ +T LL GWC+ L+EA + M D G +PDIV +N +L G
Sbjct: 282 AQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEG 341
Query: 288 YAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEAD 347
+ K +DA +L M+ KG PN SYT++I+ C+ ME A F +M SG + D
Sbjct: 342 LLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 401
Query: 348 VVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMG 407
YT LI+GF +K+D YE+L M ++G P+ TY ++ ++ E +
Sbjct: 402 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYN 461
Query: 408 EMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQG 467
+M + P + +N++++ + VW+EM + P +S+ V++ G + +G
Sbjct: 462 KMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEG 521
Query: 468 CLIEACEYFKEMVGRGL 484
EAC Y +EM+ +G+
Sbjct: 522 KSREACRYLEEMLDKGM 538
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 139/281 (49%), Gaps = 5/281 (1%)
Query: 144 LIKSLSKMRKFGAVWALMEEMRKE-KPQLITTEVFVILMRRFASARMVKKAIEVLDEMPK 202
L+ SL + + L +++++ P ++T + +L+ + R + +A + ++M
Sbjct: 269 LLDSLGRAKLGKEAQVLFDKLKERFTPNMMT---YTVLLNGWCRVRNLIEAARIWNDMID 325
Query: 203 YGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERFK-PSLRHFTSLLYGWCKEGKLVE 261
+G +PD +L+ L ++ +A KLF M+ + P++R +T ++ +CK+ +
Sbjct: 326 HGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMET 385
Query: 262 AKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQ 321
A M D+G +PD VY L++G+ K+ +ELLKEM+ KG P+ +Y LI+
Sbjct: 386 AIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIK 445
Query: 322 ALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILP 381
+ + E R + +M ++ E + T+ ++ + +R + + D MI++GI P
Sbjct: 446 LMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICP 505
Query: 382 NQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYN 422
+ +Y ++ + + E + EM G + +YN
Sbjct: 506 DDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 546
>sp|Q9LFQ4|PP383_ARATH Pentatricopeptide repeat-containing protein At5g15010,
mitochondrial OS=Arabidopsis thaliana GN=At5g15010 PE=2
SV=2
Length = 572
Score = 235 bits (599), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 129/416 (31%), Positives = 220/416 (52%), Gaps = 5/416 (1%)
Query: 71 SHDVEKIFRILKKFHSRLPKLELALQHSGVVLRPGLTERVINRCGDAGNLGYRYYMWASK 130
S DV KI +++K S +L L+ V L +++R + + +++WA K
Sbjct: 94 SEDVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGK 153
Query: 131 QPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMV 190
Q YV S Y ++I L KMRKF W L++EMRK P L+ ++ +I++R++ + V
Sbjct: 154 QQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDV 213
Query: 191 KKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERFKPSLRHFTSLL 250
KAI ++ E F LL ALC+ +V +A L ++++ + F +L
Sbjct: 214 GKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVL 273
Query: 251 YGWCKE-GKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGC 309
GWC G EA+ V ++M + G + D+V Y++++S Y++ G + +L M+++
Sbjct: 274 NGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECI 333
Query: 310 DPNANSYTVLIQALCRMEKMEEANRAFVEMERS-GCEADVVTYTTLISGFCKSRKIDRCY 368
+P+ Y ++ AL + + EA ME G E +VVTY +LI CK+RK +
Sbjct: 334 EPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAK 393
Query: 369 EILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLA 428
++ D M+++G+ P TY M EE+ EL+ +MRK+GC P V Y ++IR
Sbjct: 394 QVFDEMLEKGLFPTIRTYHAFMRILRTGEEV---FELLAKMRKMGCEPTVETYIMLIRKL 450
Query: 429 CKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGL 484
C+ + + +W+EM+ ++ P S++VM+HG G + EA Y+KEM +G+
Sbjct: 451 CRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGM 506
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 164/359 (45%), Gaps = 18/359 (5%)
Query: 212 FGCLLDALCKNSSVKEAAKLFDEMRERFKPSLRHFTSLLY---GWCKEGKLVEAKYVLVQ 268
+ ++ L K A L DEMR +F PSL + +LL +C + +A
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEMR-KFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHA 222
Query: 269 MKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDP-NANSYTVLIQALCR-M 326
K E I + +LLS + ++DA L+ K P +A S+ +++ C +
Sbjct: 223 YKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFNIVLNGWCNVI 280
Query: 327 EKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTY 386
EA R ++EM G + DVV+Y+++IS + K +++ ++ D M + I P++ Y
Sbjct: 281 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVY 340
Query: 387 LHIMLAHEKKEELEECVELMGEMRK-IGCVPDVSNYNVVIRLACKLGELKEAVNVWNEME 445
++ A K + E LM M + G P+V YN +I+ CK + +EA V++EM
Sbjct: 341 NAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 400
Query: 446 AASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVG--RGLLSAPQYGTLKALLNSLLRA 503
L P ++ H F+ ++ E E++ R + P T L+ L R
Sbjct: 401 EKGLFPTIRTY----HAFMR---ILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRW 453
Query: 504 QKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDT 562
+ + +W + K ++ ++ + IH LF NG ++EA Y +M D + P +
Sbjct: 454 RDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENV 512
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 5/202 (2%)
Query: 184 FASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER--FKP 241
++ + K +++ D M K EPD V+ ++ AL K S V EA L M E +P
Sbjct: 312 YSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEP 371
Query: 242 SLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELL 301
++ + SL+ CK K EAK V +M + G P I Y+ + + G+ + FELL
Sbjct: 372 NVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR-ILRTGE--EVFELL 428
Query: 302 KEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKS 361
+MR+ GC+P +Y +LI+ LCR + + EM+ D+ +Y +I G +
Sbjct: 429 AKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLN 488
Query: 362 RKIDRCYEILDSMIQRGILPNQ 383
KI+ Y M +G+ PN+
Sbjct: 489 GKIEEAYGYYKEMKDKGMRPNE 510
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Query: 131 QPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMV 190
+PN V Y +LIK L K RK + +EM EK T + MR R
Sbjct: 370 EPNVV----TYNSLIKPLCKARKTEEAKQVFDEML-EKGLFPTIRTYHAFMRIL---RTG 421
Query: 191 KKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSL 249
++ E+L +M K GCEP + L+ LC+ L+DEM+E+ P L + +
Sbjct: 422 EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVM 481
Query: 250 LYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYA 289
++G GK+ EA +MKD G P+ V + + S ++
Sbjct: 482 IHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWFS 521
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 39/215 (18%)
Query: 136 HSYDVYRALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASARMVKKA 193
H Y ++I SK V L + M+KE +P +V+ ++ A A V +A
Sbjct: 300 HDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPD---RKVYNAVVHALAKASFVSEA 356
Query: 194 IEVLDEMPK-YGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-------------- 238
++ M + G EP+ + L+ LCK +EA ++FDEM E+
Sbjct: 357 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR 416
Query: 239 -------------------FKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIV 279
+P++ + L+ C+ + +MK+ PD+
Sbjct: 417 ILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLS 476
Query: 280 VYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNAN 314
Y ++ G GK+ +A+ KEM+ KG PN N
Sbjct: 477 SYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNEN 511
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 226 bits (575), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 127/406 (31%), Positives = 218/406 (53%), Gaps = 7/406 (1%)
Query: 140 VYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDE 199
Y +I K + ++++ M P ++T + ++R + +K+A+EVLD
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM-SVSPDVVT---YNTILRSLCDSGKLKQAMEVLDR 229
Query: 200 MPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEGK 258
M + C PD + L++A C++S V A KL DEMR+R P + + L+ G CKEG+
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 259 LVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTV 318
L EA L M +G +P+++ +N +L G+ DA +LL +M RKG P+ ++ +
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 319 LIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRG 378
LI LCR + A +M + GC+ + ++Y L+ GFCK +K+DR E L+ M+ RG
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 379 ILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAV 438
P+ +TY ++ A K ++E+ VE++ ++ GC P + YN VI K G+ +A+
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 439 NVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLN 498
+ +EM A L P T ++ +V G +G + EA ++F E G+ P T +++
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGI--RPNAVTFNSIML 527
Query: 499 SLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEA 544
L ++++ + A D ++ +GC+ N ++TI I L G KEA
Sbjct: 528 GLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 191/393 (48%), Gaps = 6/393 (1%)
Query: 181 MRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERFK 240
+R+ +++ + L+ M +G PD L+ C+ ++AAK+ + +
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 241 -PSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFE 299
P + + ++ G+CK G++ A VL +M PD+V YN +L GK+ A E
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 300 LLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFC 359
+L M ++ C P+ +YT+LI+A CR + A + EM GC DVVTY L++G C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 360 KSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVS 419
K ++D + L+ M G PN +T+ I+ + + +L+ +M + G P V
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 420 NYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEM 479
+N++I C+ G L A+++ +M P + S+ ++HGF + + A EY + M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 480 VGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNG 539
V RG P T +L +L + KVE A ++ + + +KGC + + I L G
Sbjct: 406 VSRGCY--PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463
Query: 540 HVKEACSYCLDMMDADVMPQPDTFAKLMRGLKK 572
+A +M D+ P T++ L+ GL +
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 153/348 (43%), Gaps = 34/348 (9%)
Query: 271 DAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKME 330
++ F + V NN L + G++ + F+ L+ M G P+ T LI+ CR+ K
Sbjct: 95 NSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTR 154
Query: 331 EANRAFVEMERSGCEADVVTYTTLISGFCK------------------------------ 360
+A + +E SG DV+TY +ISG+CK
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSL 214
Query: 361 --SRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDV 418
S K+ + E+LD M+QR P+ +TY ++ A + + ++L+ EMR GC PDV
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274
Query: 419 SNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKE 478
YNV++ CK G L EA+ N+M ++ P + +++ G ++A + +
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 479 MVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSN 538
M+ +G +P T L+N L R + A D+ + GC+ N ++ +H
Sbjct: 335 MLRKGF--SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 539 GHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKV 586
+ A Y M+ P T+ ++ L K + A EI ++
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
>sp|Q9SSR6|PPR78_ARATH Pentatricopeptide repeat-containing protein At1g52640,
mitochondrial OS=Arabidopsis thaliana GN=At1g52640 PE=2
SV=1
Length = 523
Score = 219 bits (558), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 220/442 (49%), Gaps = 14/442 (3%)
Query: 67 HNEFSHD-VEKIFRILKKFHSRLPKLELALQHSGVVLRP----GLTERVINRCGDAGNLG 121
H+ S D V +I R+L R PK +L +H+ V P L E+V+ RC + G
Sbjct: 30 HDPPSPDLVNEISRVLSD--HRNPKDDL--EHTLVAYSPRVSSNLVEQVLKRCKNLGFPA 85
Query: 122 YRYYMWASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILM 181
+R+++WA + P++ HS + Y L++ L ++F +W + E R+ I+++VF I+
Sbjct: 86 HRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVF 145
Query: 182 RRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRE-RFK 240
R ++ A + +A + M ++G +P LL +LC V A + F + +
Sbjct: 146 RAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIV 205
Query: 241 PSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFEL 300
PS + ++ L+ GW + A+ V +M + D++ YN LL + G + +++
Sbjct: 206 PSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKM 265
Query: 301 LKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCK 360
+EM G P+A S+ + I A C + A + M+R +V T+ +I CK
Sbjct: 266 FQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCK 325
Query: 361 SRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSN 420
+ K+D Y +LD MIQ+G P+ TY IM H E+ +L+ M + C+PD
Sbjct: 326 NEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHT 385
Query: 421 YNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFL-GQGCLIEACEYFKEM 479
YN+V++L ++G A +W M P ++ VM+HG + +G L EAC YF+ M
Sbjct: 386 YNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMM 445
Query: 480 VGRGLLSAPQYGTLKALLNSLL 501
+ G+ P Y T +L + L
Sbjct: 446 IDEGI---PPYSTTVEMLRNRL 464
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 7/182 (3%)
Query: 116 DAGNLGYRYYMWAS-KQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITT 174
DAG++ Y + K+ + V + + +IK+L K K + L++EM +K T
Sbjct: 290 DAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEM-IQKGANPDT 348
Query: 175 EVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDE 234
+ +M V +A ++L M + C PD + +L L + A ++++
Sbjct: 349 WTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEG 408
Query: 235 MRER-FKPSLRHFTSLLYGWC-KEGKLVEAKYVLVQMKDAGFEP---DIVVYNNLLSGYA 289
M ER F P++ +T +++G K+GKL EA M D G P + + N L G+
Sbjct: 409 MSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWG 468
Query: 290 QM 291
QM
Sbjct: 469 QM 470
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 81/202 (40%), Gaps = 37/202 (18%)
Query: 371 LDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACK 430
+ M++ GI P ++ + K+ + E G+ + G VP Y++++R +
Sbjct: 161 FNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWAR 220
Query: 431 LGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQY 490
+ + A V++EM L + C+++ Y
Sbjct: 221 IRDASGARKVFDEM-------------------LERNCVVDLLAY--------------- 246
Query: 491 GTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLD 550
ALL++L ++ V+ ++ + G + + Y++ I+IH+ G V A
Sbjct: 247 ---NALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDR 303
Query: 551 MMDADVMPQPDTFAKLMRGLKK 572
M D++P TF +++ L K
Sbjct: 304 MKRYDLVPNVYTFNHIIKTLCK 325
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/538 (25%), Positives = 256/538 (47%), Gaps = 54/538 (10%)
Query: 5 SSKALSLLTKHRRFSFAPRPNTTTSHVESTATTTNQLNSNLVCLKTKEDDCKCNNTTDTH 64
S+ A SLL+ H + ES AT T ++ + L T ED
Sbjct: 26 STSATSLLSDHE-------------NDESAATITAAVSVPISPLLTPED----------- 61
Query: 65 GSHNEFSHDVEKIFRILKKFHSRLPKLE-------------LALQHSGV---VLRPGLTE 108
+ VEK I+K + + P L+L S + + P +
Sbjct: 62 ------TQTVEKFHSIIKDHYRKNPTSPNDAILNPSLTLHALSLDFSQIETSQVSPSVVR 115
Query: 109 RVINRCGDAGN-----LGYRYYMWASKQPNYVH-SYDVYRALIKSLSKMRKFGAVWALME 162
VI +CG + ++ WA+ + +Y H S Y +I K+R+F W L++
Sbjct: 116 CVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLID 175
Query: 163 EMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKN 222
M+ + I+ E F IL+RR+ A + +A+ + M YGC PD+ F ++ L +
Sbjct: 176 LMKSRNVE-ISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRK 234
Query: 223 SSVKEAAKLFDEMRERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYN 282
EA FD +++RF+P + +T+L+ GWC+ G++ EA+ V +MK AG EP++ Y+
Sbjct: 235 RRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYS 294
Query: 283 NLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERS 342
++ + G+++ A ++ +M GC PNA ++ L++ + + E+ + + +M++
Sbjct: 295 IVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKL 354
Query: 343 GCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEEC 402
GCE D +TY LI C+ ++ ++L++MI++ N T+ I EKK ++
Sbjct: 355 GCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGA 414
Query: 403 VELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHG 462
+ +M + C P+ YN+++R+ + + EM+ + P +++ ++V
Sbjct: 415 HRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTM 474
Query: 463 FLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKG 520
F G G A + FKEMV L+ P + +L L RA +++ +++ ++ KG
Sbjct: 475 FCGMGHWNNAYKLFKEMVEEKCLT-PSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 139/312 (44%), Gaps = 10/312 (3%)
Query: 281 YNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEME 340
YN ++ ++ + A+ L+ M+ + + + ++T+LI+ R EA F ME
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 341 RSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELE 400
GC D + ++ +IS + R+ DS+ R P+ + Y +++ + E+
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEIS 272
Query: 401 ECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMV 460
E ++ EM+ G P+V Y++VI C+ G++ A +V+ +M + +P +F ++
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 461 HGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKG 520
+ G + + + +M + L P T L+ + R + +E A V + ++ K
Sbjct: 333 RVHVKAGRTEKVLQVYNQM--KKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 521 CELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAA 580
CE+N + + V A MM+A P T+ LMR + +
Sbjct: 391 CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMF-------VGS 443
Query: 581 EITEKVRKMAAE 592
+ T+ V KM E
Sbjct: 444 KSTDMVLKMKKE 455
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 87/213 (40%), Gaps = 16/213 (7%)
Query: 393 HEKKEELEECVELMGEMRKIGCV-------------PDVSNYNVVIRLACKLGELKEAVN 439
H+ E ++L G++R+ + + ++IR + G EAV+
Sbjct: 148 HKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVH 207
Query: 440 VWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNS 499
+N ME P +F +++ + EA +F + R P L+
Sbjct: 208 CFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRF---EPDVIVYTNLVRG 264
Query: 500 LLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQ 559
RA ++ A+ V+ + G E NVY ++I I +L G + A DM+D+ P
Sbjct: 265 WCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPN 324
Query: 560 PDTFAKLMRGLKKLYNRQIAAEITEKVRKMAAE 592
TF LMR K + ++ +++K+ E
Sbjct: 325 AITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCE 357
>sp|Q9LUJ4|PP248_ARATH Pentatricopeptide repeat-containing protein At3g22670,
mitochondrial OS=Arabidopsis thaliana GN=At3g22670 PE=2
SV=1
Length = 562
Score = 212 bits (539), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 129/452 (28%), Positives = 232/452 (51%), Gaps = 7/452 (1%)
Query: 73 DVEKIFRILKKFHSRLPKLELALQHSGVVLRPGLTERVINRCGDAGNLGYRYYMWASKQP 132
D++K+ L K + + L VV+ L +V+ R + N Y +++WA+ Q
Sbjct: 101 DIDKVCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQT 160
Query: 133 NYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRK-EKPQLITTEVFVILMRRFASARMVK 191
YVHS Y A++ L K R F +W L+ EM K E+ +L+T + +MRR A +
Sbjct: 161 GYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYN 220
Query: 192 KAIEVLDEMPK-YGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERFKPSLRHFTSLL 250
KA++ EM K YG + D L+DAL K +S++ A ++F ++ + KP R F L+
Sbjct: 221 KAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILI 280
Query: 251 YGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCD 310
+G+CK K +A+ ++ MK F PD+V Y + + Y + G E+L+EMR GC+
Sbjct: 281 HGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCN 340
Query: 311 PNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEI 370
PN +YT+++ +L + +++ EA + +M+ GC D Y++LI K+ + EI
Sbjct: 341 PNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEI 400
Query: 371 LDSMIQRGILPNQLTY---LHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRL 427
+ M +G+ + L Y + L H + E ++ M + C P+V Y ++++
Sbjct: 401 FEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKM 460
Query: 428 ACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSA 487
C ++K + + M +S ++++++ G G + EAC +F+E V +G++
Sbjct: 461 CCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMV-- 518
Query: 488 PQYGTLKALLNSLLRAQKVEMAKDVWSCIVTK 519
P+ T K L++ L + E + S + +K
Sbjct: 519 PRDSTCKMLVDELEKKNMAEAKLKIQSLVQSK 550
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/333 (18%), Positives = 115/333 (34%), Gaps = 90/333 (27%)
Query: 280 VYNNLLSGYAQMGKMTDA--------------FELLKEMRRKGCDP--NANSYTVLIQAL 323
++ N +GY G +A +EL+ EM + ++ + +++ L
Sbjct: 154 IWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRL 213
Query: 324 CRMEKMEEANRAFVEMERS-GCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPN 382
+ K +A AF+EME+S G + D + +L+ K I+ +E+
Sbjct: 214 AKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF----------- 262
Query: 383 QLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWN 442
++L ++ PD +N++I CK + +A + +
Sbjct: 263 --------------------LKLFDTIK-----PDARTFNILIHGFCKARKFDDARAMMD 297
Query: 443 EMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLR 502
M+ +P ++ V + +G E +EM
Sbjct: 298 LMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMR---------------------- 335
Query: 503 AQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDT 562
GC NV +TI +HSL + V EA M + +P
Sbjct: 336 ---------------ENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKF 380
Query: 563 FAKLMRGLKKLYNRQIAAEITEKVRKMAAERQI 595
++ L+ L K + AAEI E + R +
Sbjct: 381 YSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDV 413
>sp|Q0WP85|PP150_ARATH Pentatricopeptide repeat-containing protein At2g13420,
mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2
SV=1
Length = 509
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 131/477 (27%), Positives = 238/477 (49%), Gaps = 25/477 (5%)
Query: 69 EFSHDVEKIFRILKKFHSRLPKLELALQHSGVVLRPGLTERVINRCGDAGNLGYRYYMWA 128
E S D E I ++L H+ +E +LQ +G+ L P L + + R + ++ +
Sbjct: 36 EPSSDAELISQMLITNHNPFHFMESSLQLNGISLTPNLIHQTLLRLRHNSKIALSFFQYL 95
Query: 129 SKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASAR 188
P+ + + +I L ++R+F V L+ EM + P E F+IL++R +A
Sbjct: 96 RSLPSPSTTPTSFNLIIDILGRVRQFDVVRQLIVEMDQTSP-----ETFLILVKRLIAAG 150
Query: 189 MVKKAIEVLDEMPKYGCEPDEF---VFGCLLDALCKNSSVKEAAKLFDEMRERFKPSLRH 245
+ ++A+ D+ P + E F FG LLD LCK K A +F+E +E F +
Sbjct: 151 LTRQAVRAFDDAPCF-LENRRFRLVEFGFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKV 209
Query: 246 FTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKM----------T 295
+T L+ GWCK ++ A+ LV+M ++G EP++V YN LL+G + +
Sbjct: 210 YTILIAGWCKLRRIDMAEKFLVEMIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVR 269
Query: 296 DAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLI 355
+A ++ EMR++G +P+ S+++++ R K E M+ G + TYT+++
Sbjct: 270 NAEKVFDEMRQRGIEPDVTSFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVV 329
Query: 356 SGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCV 415
C +++ E+L++M++ GI P+ TY ++ +++ + L +M+ C
Sbjct: 330 KCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCK 389
Query: 416 PDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEY 475
P YNV++ LG+++ +W++++A+ P DS+ +VHG + EAC Y
Sbjct: 390 PSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGY 449
Query: 476 FKEMVGRGLLSAPQYGTLKALLNSLLRAQKV----EMAKDVWSCIVTKGCELNVYAW 528
F EM+ RG L PQ T + L L+++ K+ + K + +T G E Y +
Sbjct: 450 FVEMIERGFL--PQKLTFETLYKGLIQSNKMRTWRRLKKKLDEESITFGSEFQRYPF 504
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/436 (28%), Positives = 219/436 (50%), Gaps = 8/436 (1%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKEK--PQLITTEVFVILMRRFASARMVKKAIEVLD 198
Y ++I +L K + ++ M K P +T + ++ + S+ K+AI L
Sbjct: 234 YNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT---YNSILHGYCSSGQPKEAIGFLK 290
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEG 257
+M G EPD + L+D LCKN EA K+FD M +R KP + + +LL G+ +G
Sbjct: 291 KMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKG 350
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYT 317
LVE +L M G PD V++ L+ YA+ GK+ A + +MR++G +PNA +Y
Sbjct: 351 ALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYG 410
Query: 318 VLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQR 377
+I LC+ ++E+A F +M G + Y +LI G C K +R E++ M+ R
Sbjct: 411 AVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDR 470
Query: 378 GILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEA 437
GI N + + I+ +H K+ + E +L M +IG P+V YN +I C G++ EA
Sbjct: 471 GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEA 530
Query: 438 VNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALL 497
+ + + M + L P T ++ +++G+ + +A FKEM G+ +P T +L
Sbjct: 531 MKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV--SPDIITYNIIL 588
Query: 498 NSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVM 557
L + ++ AK+++ I G ++ + + I +H L N +A ++ D+
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648
Query: 558 PQPDTFAKLMRGLKKL 573
+ TF ++ L K+
Sbjct: 649 LEARTFNIMIDALLKV 664
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 195/401 (48%), Gaps = 6/401 (1%)
Query: 177 FVILMRRFASARMVKKAIEVLDEMPK---YGCEPDEFVFGCLLDALCKNSSVKEAAKLFD 233
+ IL++ ++A+E+L M G PD + +++ K +A +
Sbjct: 161 YNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYH 220
Query: 234 EMRER-FKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMG 292
EM +R P + + S++ CK + +A VL M G PD + YN++L GY G
Sbjct: 221 EMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSG 280
Query: 293 KMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYT 352
+ +A LK+MR G +P+ +Y++L+ LC+ + EA + F M + G + ++ TY
Sbjct: 281 QPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYG 340
Query: 353 TLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKI 412
TL+ G+ + + +LD M++ GI P+ + ++ A+ K+ ++++ + + +MR+
Sbjct: 341 TLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 400
Query: 413 GCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEA 472
G P+ Y VI + CK G +++A+ + +M LSPG + ++HG A
Sbjct: 401 GLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERA 460
Query: 473 CEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWI 532
E EM+ RG+ + ++++S + +V ++ ++ +V G + NV + I
Sbjct: 461 EELILEMLDRGICLNTIF--FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLI 518
Query: 533 HSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKL 573
+ G + EA M+ + P T++ L+ G K+
Sbjct: 519 NGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKI 559
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 192/425 (45%), Gaps = 42/425 (9%)
Query: 165 RKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSS 224
R KP++ T + L++ +A+ + + +LD M + G PD +VF L+ A K
Sbjct: 330 RGLKPEITT---YGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGK 386
Query: 225 VKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNN 283
V +A +F +MR++ P+ + +++ CK G++ +A QM D G P +VYN+
Sbjct: 387 VDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 446
Query: 284 LLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSG 343
L+ G K A EL+ EM +G N + +I + C+ ++ E+ + F M R G
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIG 506
Query: 344 CEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECV 403
+ +V+TY TLI+G+C + K+D ++L M+ G+ PN +TY ++ + K +E+ +
Sbjct: 507 VKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDAL 566
Query: 404 ELMGEMRKIGCVPDV-----------------------------------SNYNVVIRLA 428
L EM G PD+ S YN+++
Sbjct: 567 VLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGL 626
Query: 429 CKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAP 488
CK +A+ ++ + L +F +M+ L G EA + F GL+ P
Sbjct: 627 CKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV--P 684
Query: 489 QYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYC 548
Y T + + +++ +E ++ + GC ++ + L G + A +Y
Sbjct: 685 NYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTY- 743
Query: 549 LDMMD 553
L M+D
Sbjct: 744 LSMID 748
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 196/415 (47%), Gaps = 10/415 (2%)
Query: 133 NYVH-SYDVYRALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASARM 189
N +H + V+ LI + +K K + +MR++ P +T + ++ + S R
Sbjct: 365 NGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCK--SGR- 421
Query: 190 VKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTS 248
V+ A+ ++M G P V+ L+ LC + + A +L EM +R + F S
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481
Query: 249 LLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKG 308
++ CKEG+++E++ + M G +P+++ YN L++GY GKM +A +LL M G
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 309 CDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCY 368
PN +Y+ LI C++ +ME+A F EME SG D++TY ++ G ++R+
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Query: 369 EILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLA 428
E+ + + G TY I+ K + ++ +++ + + + +N++I
Sbjct: 602 ELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDAL 661
Query: 429 CKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAP 488
K+G EA +++ + L P ++ +M +GQG L E + F M G
Sbjct: 662 LKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG--CTV 719
Query: 489 QYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKE 543
G L ++ LL+ ++ A S I K L +++I L S G +E
Sbjct: 720 DSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI-DLLSGGKYQE 773
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 153/367 (41%), Gaps = 72/367 (19%)
Query: 276 PDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEA--- 332
PD+ Y L+ + G++ F L + +KG +A ++T L++ LC ++ +A
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 333 ---------------------------NRAFVEME---------RSGCEADVVTYTTLIS 356
NR+ +E G DVV+YTT+I+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 357 GFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVP 416
GF K D+ Y M+ RGILP+ +TY I+ A K + +++ +E++ M K G +P
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 417 DVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYF 476
D YN ++ C G+ KEA+ +M + + P ++ +++ G +EA + F
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 477 KEMVGRGL-LSAPQYGTL-------------KALLNSLLR-------------------A 503
M RGL YGTL LL+ ++R
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384
Query: 504 QKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTF 563
KV+ A V+S + +G N + I L +G V++A Y M+D + P +
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444
Query: 564 AKLMRGL 570
L+ GL
Sbjct: 445 NSLIHGL 451
Score = 89.4 bits (220), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 145/308 (47%), Gaps = 10/308 (3%)
Query: 296 DAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCE---ADVVTYT 352
DA + E+ R+G + + + R +R + M R+G + D+ TY
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSR-YNRMARAGADEVTPDLCTYG 91
Query: 353 TLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVEL-MGEMRK 411
LI C++ ++D + L ++I++G + + + ++ + + +++ + M +
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 412 IGCVPDVSNYNVVIRLACKLGELKEAVNVWNEM---EAASLSPGTDSFVVMVHGFLGQGC 468
+GC+P+V +YN++++ C +EA+ + + M P S+ +++GF +G
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 469 LIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAW 528
+A + EM+ RG+L P T +++ +L +AQ ++ A +V + +V G + +
Sbjct: 212 SDKAYSTYHEMLDRGIL--PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 269
Query: 529 TIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRK 588
+H S+G KEA + M V P T++ LM L K A +I + + K
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329
Query: 589 MAAERQIT 596
+ +IT
Sbjct: 330 RGLKPEIT 337
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 196 bits (498), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 229/433 (52%), Gaps = 9/433 (2%)
Query: 113 RCGDAGNLGYRYYMWASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLI 172
+ DA +L +R + + P + + L +++K +++ V AL ++M + K
Sbjct: 68 KADDAVDL-FRDMIQSRPLPTVID----FNRLFSAIAKTKQYELVLALCKQM-ESKGIAH 121
Query: 173 TTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLF 232
+ I++ F R + A + ++ K G EPD +F LL+ LC V EA +L
Sbjct: 122 SIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELV 181
Query: 233 DEMRER-FKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQM 291
D M E KP+L +L+ G C GK+ +A ++ +M + GF+P+ V Y +L+ +
Sbjct: 182 DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS 241
Query: 292 GKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTY 351
G+ A ELL++M + +A Y+++I LC+ ++ A F EME G +AD++TY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301
Query: 352 TTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRK 411
TLI GFC + + D ++L MI+R I PN +T+ ++ + K+ +L E +L+ EM +
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 412 IGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIE 471
G P+ YN +I CK L+EA+ + + M + P +F ++++G+ + +
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 472 ACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIW 531
E F+EM RG+++ T L+ ++ K+E+AK ++ +V++ ++ ++ I
Sbjct: 422 GLELFREMSLRGVIANTV--TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKIL 479
Query: 532 IHSLFSNGHVKEA 544
+ L NG +++A
Sbjct: 480 LDGLCDNGELEKA 492
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 214/421 (50%), Gaps = 6/421 (1%)
Query: 168 KPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKE 227
KP LIT V V A+ ++D M + G +P+E +G +L+ +CK+
Sbjct: 190 KPTLITLNTLV---NGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 228 AAKLFDEMRER-FKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLS 286
A +L +M ER K ++ ++ G CK+G L A + +M+ GF+ DI+ YN L+
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 287 GYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEA 346
G+ G+ D +LL++M ++ PN +++VLI + + K+ EA++ EM + G
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 347 DVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELM 406
+ +TY +LI GFCK +++ +++D MI +G P+ +T+ ++ + K +++ +EL
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 407 GEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQ 466
EM G + + YN +++ C+ G+L+ A ++ EM + + P S+ +++ G
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 467 GCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVY 526
G L +A E F ++ + G +++ + A KV+ A D++ + KG +L+
Sbjct: 487 GELEKALEIFGKIEKSKM--ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDAR 544
Query: 527 AWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKV 586
A+ I I L + +A M + P T+ L+R + AAE+ E++
Sbjct: 545 AYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Query: 587 R 587
+
Sbjct: 605 K 605
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 164/331 (49%), Gaps = 9/331 (2%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEM--RKEKPQLITTEVFVILMRRFASARMVKKAIEVLD 198
Y LI ++ L+ +M RK P ++T F +L+ F +++A ++L
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVT---FSVLIDSFVKEGKLREADQLLK 357
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEG 257
EM + G P+ + L+D CK + ++EA ++ D M + P + F L+ G+CK
Sbjct: 358 EMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKAN 417
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYT 317
++ + + +M G + V YN L+ G+ Q GK+ A +L +EM + P+ SY
Sbjct: 418 RIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYK 477
Query: 318 VLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQR 377
+L+ LC ++E+A F ++E+S E D+ Y +I G C + K+D +++ S+ +
Sbjct: 478 ILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLK 537
Query: 378 GILPNQLTYLHIMLAHE-KKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKE 436
G+ + Y +IM++ +K+ L + L +M + G PD YN++IR +
Sbjct: 538 GVKLDARAY-NIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATT 596
Query: 437 AVNVWNEMEAASLSPGTDSFVVMVHGFLGQG 467
A + EM+++ P S V MV L G
Sbjct: 597 AAELIEEMKSSGF-PADVSTVKMVINMLSSG 626
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 167/380 (43%), Gaps = 38/380 (10%)
Query: 227 EAAKLF-DEMRERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLL 285
+A LF D ++ R P++ F L K + + QM+ G I + ++
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 286 SGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCE 345
+ + + K++ AF + ++ + G +P+ + L+ LC ++ EA M G +
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 346 ADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVEL 405
++T TL++G C + K+ ++D M++ G PN++TY ++ K + +EL
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 406 MGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAAS----------------- 448
+ +M + D Y+++I CK G L A N++NEME
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 449 ------------------LSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQY 490
+SP +F V++ F+ +G L EA + KEM+ RG+ AP
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGI--APNT 368
Query: 491 GTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLD 550
T +L++ + ++E A + +++KGC+ ++ + I I+ + + +
Sbjct: 369 ITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 551 MMDADVMPQPDTFAKLMRGL 570
M V+ T+ L++G
Sbjct: 429 MSLRGVIANTVTYNTLVQGF 448
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/315 (19%), Positives = 121/315 (38%), Gaps = 37/315 (11%)
Query: 293 KMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYT 352
K DA +L ++M + P + L A+ + ++ E +ME G + T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 353 TLISGFCKSRKIDRCY-----------------------------------EILDSMIQR 377
+I+ FC+ RK+ + E++D M++
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 378 GILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEA 437
G P +T ++ ++ + V L+ M + G P+ Y V+ + CK G+ A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 438 VNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALL 497
+ + +ME ++ + +++ G G L A F EM +G T L+
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF--KADIITYNTLI 305
Query: 498 NSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVM 557
A + + + ++ + NV +++ I S G ++EA +MM +
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 558 PQPDTFAKLMRGLKK 572
P T+ L+ G K
Sbjct: 366 PNTITYNSLIDGFCK 380
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 131/449 (29%), Positives = 220/449 (48%), Gaps = 39/449 (8%)
Query: 110 VINRCGDAGNLGYRYYMWA----------SKQPNYVHSYDVYRALIKSLSKMRKFGAVWA 159
VIN C +G + ++ S QP S+ L KM K G
Sbjct: 91 VINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF---------LGKMMKLGF--- 138
Query: 160 LMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDAL 219
+P ++T F L+ F +++A+ ++++M + G +PD ++ ++D+L
Sbjct: 139 --------EPDIVT---FTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSL 187
Query: 220 CKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDI 278
CKN V A LFD+M +P + +TSL+ G C G+ +A +L M +PD+
Sbjct: 188 CKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDV 247
Query: 279 VVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVE 338
+ +N L+ + + GK DA EL EM R PN +YT LI C ++EA + F
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 339 MERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEE 398
ME GC DVV YT+LI+GFCK +K+D +I M Q+G+ N +TY ++ + +
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 399 LEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEM---EAASLSPGTDS 455
E+ M G P++ YNV++ C G++K+A+ ++ +M E ++P +
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 456 FVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSC 515
+ V++HG G L +A F++M R + T ++ + +A KV+ A +++
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREM--DIGIITYTIIIQGMCKAGKVKNAVNLFCS 485
Query: 516 IVTKGCELNVYAWTIWIHSLFSNGHVKEA 544
+ +KG + NV +T I LF G EA
Sbjct: 486 LPSKGVKPNVVTYTTMISGLFREGLKHEA 514
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 195/422 (46%), Gaps = 7/422 (1%)
Query: 134 YVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKA 193
+V ++ YR ++++ +F L M + +P L + F L+ A +
Sbjct: 33 WVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRP-LPSIIDFTKLLNVIAKMKKFDVV 91
Query: 194 IEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RERFKPSLRHFTSLLYG 252
I + D + G D + L++ C++S A+ +M + F+P + FTSL+ G
Sbjct: 92 INLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLING 151
Query: 253 WCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPN 312
+C ++ EA ++ QM + G +PD+V+Y ++ + G + A L +M G P+
Sbjct: 152 FCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPD 211
Query: 313 ANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILD 372
YT L+ LC + +A+ M + + DV+T+ LI F K K E+ +
Sbjct: 212 VVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYN 271
Query: 373 SMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLG 432
MI+ I PN TY ++ + ++E ++ M GC PDV Y +I CK
Sbjct: 272 EMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCK 331
Query: 433 ELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGT 492
++ +A+ ++ EM L+ T ++ ++ GF G A E F MV RG+ P T
Sbjct: 332 KVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGV--PPNIRT 389
Query: 493 LKALLNSLLRAQKVEMAKDVWSCIVTK---GCELNVYAWTIWIHSLFSNGHVKEACSYCL 549
LL+ L KV+ A ++ + + G N++ + + +H L NG +++A
Sbjct: 390 YNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFE 449
Query: 550 DM 551
DM
Sbjct: 450 DM 451
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 150/322 (46%), Gaps = 2/322 (0%)
Query: 261 EAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLI 320
EA + M ++ P I+ + LL+ A+M K L ++ G + + +L+
Sbjct: 55 EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114
Query: 321 QALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGIL 380
C+ + A+ +M + G E D+VT+T+LI+GFC +++ +++ M++ GI
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 381 PNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNV 440
P+ + Y I+ + K + + L +M G PDV Y ++ C G ++A ++
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 441 WNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSL 500
M + P +F ++ F+ +G ++A E + EM+ + AP T +L+N
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI--APNIFTYTSLINGF 292
Query: 501 LRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQP 560
V+ A+ ++ + TKGC +V A+T I+ V +A +M +
Sbjct: 293 CMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNT 352
Query: 561 DTFAKLMRGLKKLYNRQIAAEI 582
T+ L++G ++ +A E+
Sbjct: 353 ITYTTLIQGFGQVGKPNVAQEV 374
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 169/383 (44%), Gaps = 47/383 (12%)
Query: 110 VINRCGDAGNLGYRYYMWASKQPNYVHSYDV--YRALIKSLSKMRKFGAVWALMEEM--R 165
+I+ G++ Y ++ + NY DV Y +L+ L ++ +L+ M R
Sbjct: 183 IIDSLCKNGHVNYALSLF-DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKR 241
Query: 166 KEKPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSV 225
K KP +IT F L+ F A E+ +EM + P+ F + L++ C V
Sbjct: 242 KIKPDVIT---FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCV 298
Query: 226 KEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNL 284
EA ++F M + P + +TSL+ G+CK K+ +A + +M G + + Y L
Sbjct: 299 DEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 285 LSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMER--- 341
+ G+ Q+GK A E+ M +G PN +Y VL+ LC K+++A F +M++
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 342 SGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEE 401
G ++ TY L+ G C + K+++ + + M +K E++
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM--------------------RKREMDI 458
Query: 402 CVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVH 461
+ + + C K G++K AVN++ + + + P ++ M+
Sbjct: 459 GIITYTIIIQGMC---------------KAGKVKNAVNLFCSLPSKGVKPNVVTYTTMIS 503
Query: 462 GFLGQGCLIEACEYFKEMVGRGL 484
G +G EA F++M G+
Sbjct: 504 GLFREGLKHEAHVLFRKMKEDGV 526
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 207/416 (49%), Gaps = 3/416 (0%)
Query: 122 YRYYMWASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILM 181
Y Y + ++ N + + +IK+L K+R + M E+ L + LM
Sbjct: 171 YDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGM-PERKCLPDGYTYCTLM 229
Query: 182 RRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FK 240
+ +A+ +LDEM GC P ++ L+D LCK + KL D M +
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV 289
Query: 241 PSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFEL 300
P+ + +L++G C +GKL +A +L +M + P+ V Y L++G + + TDA L
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 301 LKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCK 360
L M +G N + Y+VLI L + K EEA + +M GC+ ++V Y+ L+ G C+
Sbjct: 350 LSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCR 409
Query: 361 SRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSN 420
K + EIL+ MI G LPN TY +M K EE V++ EM K GC +
Sbjct: 410 EGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFC 469
Query: 421 YNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMV 480
Y+V+I C +G +KEA+ VW++M + P T ++ ++ G G G + A + + EM+
Sbjct: 470 YSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Query: 481 GR-GLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSL 535
+ S P T LL+ L + + A D+ + ++ +GC+ +V ++++L
Sbjct: 530 CQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 193/434 (44%), Gaps = 9/434 (2%)
Query: 143 ALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEM-P 201
++I+S + F +V L+ +R E ++I F+++ R + A + KA+++ M
Sbjct: 82 SMIESYANSGDFDSVEKLLSRIRLEN-RVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVD 140
Query: 202 KYGCEPDEFVFGCLLDALCKNSSVKEAAKLFD-----EMRERFKPSLRHFTSLLYGWCKE 256
++ C+ F +L+ + + +D M P+ F ++ CK
Sbjct: 141 EFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL 200
Query: 257 GKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSY 316
+ A V M + PD Y L+ G + ++ +A LL EM+ +GC P+ Y
Sbjct: 201 RFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIY 260
Query: 317 TVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQ 376
VLI LC+ + + M GC + VTY TLI G C K+D+ +L+ M+
Sbjct: 261 NVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320
Query: 377 RGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKE 436
+PN +TY ++ K+ + V L+ M + G + Y+V+I K G+ +E
Sbjct: 321 SKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEE 380
Query: 437 AVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKAL 496
A+++W +M P + V+V G +G EA E M+ G L P T +L
Sbjct: 381 AMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCL--PNAYTYSSL 438
Query: 497 LNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADV 556
+ + E A VW + GC N + +++ I L G VKEA M+ +
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Query: 557 MPQPDTFAKLMRGL 570
P ++ +++GL
Sbjct: 499 KPDTVAYSSIIKGL 512
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 214/436 (49%), Gaps = 9/436 (2%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASARMVKKAIEVLD 198
Y ALI KM + +++ MR + P +T + I++ S + A++VL+
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVT---YNIMIGSLCSRGKLDLALKVLN 217
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEG 257
++ C+P + L++A V EA KL DEM R KP + + +++ G CKEG
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYT 317
+ A ++ ++ G EPD++ YN LL GK + +L+ +M + CDPN +Y+
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 318 VLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQR 377
+LI LCR K+EEA M+ G D +Y LI+ FC+ ++D E L++MI
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 378 GILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEA 437
G LP+ + Y ++ K + ++ +E+ G++ ++GC P+ S+YN + G+ A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 438 VNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALL 497
+++ EM + + P ++ M+ +G + EA E +M R P T +L
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM--RSCEFHPSVVTYNIVL 515
Query: 498 NSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVM 557
+A ++E A +V +V GC N +T+ I + G+ EA D++ D +
Sbjct: 516 LGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAI 575
Query: 558 PQPDTFAKLMRGLKKL 573
+ +F +L R L
Sbjct: 576 SEY-SFKRLHRTFPLL 590
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 201/397 (50%), Gaps = 3/397 (0%)
Query: 174 TEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFD 233
T++ I R S ++ ++ +L+ M + G PD + L+ ++ +A ++ +
Sbjct: 90 TQMLKIFHRSCRSGNYIE-SLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME 148
Query: 234 EMRERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGK 293
+ + +P + + +L+ G+CK ++ +A VL +M+ F PD V YN ++ GK
Sbjct: 149 ILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGK 208
Query: 294 MTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTT 353
+ A ++L ++ C P +YT+LI+A ++EA + EM G + D+ TY T
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268
Query: 354 LISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIG 413
+I G CK +DR +E++ ++ +G P+ ++Y ++ A + + EE +LM +M
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 414 CVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEAC 473
C P+V Y+++I C+ G+++EA+N+ M+ L+P S+ ++ F +G L A
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 474 EYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIH 533
E+ + M+ G L P +L +L + K + A +++ + GC N ++
Sbjct: 389 EFLETMISDGCL--PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFS 446
Query: 534 SLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGL 570
+L+S+G A L+MM + P T+ ++ L
Sbjct: 447 ALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Score = 59.3 bits (142), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 87/214 (40%), Gaps = 38/214 (17%)
Query: 359 CKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDV 418
C+S +L++M+++G P+ + ++ + + V +M + K G PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 419 SNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKE 478
YN +I CK+ + +A V + M + SP T ++ +M+ +G
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG----------- 207
Query: 479 MVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSN 538
K+++A V + +++ C+ V +TI I +
Sbjct: 208 --------------------------KLDLALKVLNQLLSDNCQPTVITYTILIEATMLE 241
Query: 539 GHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKK 572
G V EA +M+ + P T+ ++RG+ K
Sbjct: 242 GGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/474 (28%), Positives = 229/474 (48%), Gaps = 44/474 (9%)
Query: 132 PNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEK--PQLITTEVFVILMRRFASARM 189
PN V +Y+ LI SLSK + L+EEM P T ++ + +F
Sbjct: 250 PNSV----IYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR--- 302
Query: 190 VKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLF----------------- 232
+ +A ++++ M G PD+ +G L++ LCK V A LF
Sbjct: 303 INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHG 362
Query: 233 -------DEMRERFK---------PSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEP 276
D+ + P + + SL+YG+ KEG + A VL M++ G +P
Sbjct: 363 FVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKP 422
Query: 277 DIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAF 336
++ Y L+ G+ ++GK+ +A+ +L EM G PN + LI A C+ ++ EA F
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 337 VEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKK 396
EM R GC+ DV T+ +LISG C+ +I +L MI G++ N +TY ++ A ++
Sbjct: 483 REMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRR 542
Query: 397 EELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSF 456
E++E +L+ EM G D YN +I+ C+ GE+ +A +++ +M +P S
Sbjct: 543 GEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISC 602
Query: 457 VVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCI 516
++++G G + EA E+ KEMV RG S P T +L+N L RA ++E ++ +
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEMVLRG--STPDIVTFNSLINGLCRAGRIEDGLTMFRKL 660
Query: 517 VTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGL 570
+G + + + L G V +AC + ++ +P T++ L++ +
Sbjct: 661 QAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/480 (26%), Positives = 225/480 (46%), Gaps = 37/480 (7%)
Query: 125 YMWASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRF 184
+ W Q Y HS+DVY+ LI L +F + L+ +M+ E + +F+ +MR +
Sbjct: 98 FSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEG-IVFKESLFISIMRDY 156
Query: 185 ASARMVKKAIEVLDEMPK-YGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPS 242
A + ++ EM Y CEP + +L+ L + K AA +F +M R P+
Sbjct: 157 DKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPT 216
Query: 243 LRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLK 302
L F ++ +C ++ A +L M G P+ V+Y L+ ++ ++ +A +LL+
Sbjct: 217 LFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLE 276
Query: 303 EMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSR 362
EM GC P+A ++ +I LC+ +++ EA + M G D +TY L++G CK
Sbjct: 277 EMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIG 336
Query: 363 KIDRCYEIL--------------------------------DSMIQRGILPNQLTYLHIM 390
++D ++ D + GI+P+ TY ++
Sbjct: 337 RVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLI 396
Query: 391 LAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLS 450
+ K+ + +E++ +MR GC P+V +Y +++ CKLG++ EA NV NEM A L
Sbjct: 397 YGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK 456
Query: 451 PGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAK 510
P T F ++ F + + EA E F+EM +G P T +L++ L +++ A
Sbjct: 457 PNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG--CKPDVYTFNSLISGLCEVDEIKHAL 514
Query: 511 DVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGL 570
+ ++++G N + I++ G +KEA +M+ T+ L++GL
Sbjct: 515 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGL 574
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 165/332 (49%), Gaps = 6/332 (1%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASARMVKKAIEVLD 198
Y +LI K G ++ +MR + KP + + + IL+ F + +A VL+
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS---YTILVDGFCKLGKIDEAYNVLN 448
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RERFKPSLRHFTSLLYGWCKEG 257
EM G +P+ F CL+ A CK + EA ++F EM R+ KP + F SL+ G C+
Sbjct: 449 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 508
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYT 317
++ A ++L M G + V YN L++ + + G++ +A +L+ EM +G + +Y
Sbjct: 509 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYN 568
Query: 318 VLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQR 377
LI+ LCR ++++A F +M R G ++ LI+G C+S ++ E M+ R
Sbjct: 569 SLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR 628
Query: 378 GILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEA 437
G P+ +T+ ++ + +E+ + + +++ G PD +N ++ CK G + +A
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 438 VNVWNEMEAASLSPGTDSFVVMVHGFLGQGCL 469
+ +E P ++ +++ + Q L
Sbjct: 689 CLLLDEGIEDGFVPNHRTWSILLQSIIPQETL 720
Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 141/308 (45%), Gaps = 45/308 (14%)
Query: 131 QPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASAR 188
+PN V+SY + L+ K+ K + ++ EM + KP + F L+ F
Sbjct: 421 KPN-VYSYTI---LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG---FNCLISAFCKEH 473
Query: 189 MVKKAIEVLDEMPKYGCEPDEFVFGCLLDALC---------------------------- 220
+ +A+E+ EMP+ GC+PD + F L+ LC
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 221 -------KNSSVKEAAKLFDEMRERFKP-SLRHFTSLLYGWCKEGKLVEAKYVLVQMKDA 272
+ +KEA KL +EM + P + SL+ G C+ G++ +A+ + +M
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 273 GFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEA 332
G P + N L++G + G + +A E KEM +G P+ ++ LI LCR ++E+
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653
Query: 333 NRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLA 392
F +++ G D VT+ TL+S CK + +LD I+ G +PN T+ ++ +
Sbjct: 654 LTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQS 713
Query: 393 HEKKEELE 400
+E L+
Sbjct: 714 IIPQETLD 721
>sp|Q9LFM6|PP375_ARATH Pentatricopeptide repeat-containing protein At5g11310,
mitochondrial OS=Arabidopsis thaliana GN=At5g11310 PE=2
SV=1
Length = 602
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/444 (29%), Positives = 224/444 (50%), Gaps = 28/444 (6%)
Query: 91 LELALQHSGVVLRPGLTERVINRCGDAGNLGYRYYMWASKQPNYVHSYDVYRALIKSLSK 150
LE AL +G+ L + +R + L + + WA +P + S ++ +++ SL K
Sbjct: 88 LESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCK 147
Query: 151 MRKFGAVWALM-EEMRK-EKPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEP- 207
R+F W+L+ + +R E L++ + F++L+RR+A A MV++AI + Y EP
Sbjct: 148 AREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSY--EPV 205
Query: 208 -----DEFVFGCLLDALCKNSSVKEAA----KLFDEMRERFKPSLRHFTSLLYGWCKEGK 258
+ + LLDALCK V+EA+ ++ M + PS+R F LL GW + K
Sbjct: 206 CKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRK 265
Query: 259 LVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTV 318
L +A+ + +MK +P +V Y L+ GY +M ++ A E+L+EM+ + N +
Sbjct: 266 LKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNP 325
Query: 319 LIQALCRMEKMEEA----NRAFVEMERSGCEA--DVVTYTTLISGFCKSRKIDRCYEILD 372
+I L ++ EA R FV CE+ +VTY +L+ FCK+ + +IL
Sbjct: 326 IIDGLGEAGRLSEALGMMERFFV------CESGPTIVTYNSLVKNFCKAGDLPGASKILK 379
Query: 373 SMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLG 432
M+ RG+ P TY H K + EE + L ++ + G PD Y++++++ C+ G
Sbjct: 380 MMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDG 439
Query: 433 ELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGT 492
+L A+ V EM+ + P + +++H L EA E F V RG++ PQY T
Sbjct: 440 KLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGII--PQYIT 497
Query: 493 LKALLNSLLRAQKVEMAKDVWSCI 516
K + N L +MAK + S +
Sbjct: 498 FKMIDNGLRSKGMSDMAKRLSSLM 521
Score = 33.9 bits (76), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 411 KIGCVPDVSNYNVVIRLACKLGELKEAVN-VWNEM---EAASLSPGTDSFVVMVHGFLGQ 466
K G S ++ V+ CK E + A + V++ + E ++L D+F+V++ +
Sbjct: 128 KPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLV-SADTFIVLIRRYARA 186
Query: 467 GCLIEACEYFK-----EMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCI---VT 518
G + +A F+ E V + SA + L+ LL++L + V A I +
Sbjct: 187 GMVQQAIRAFEFARSYEPVCK---SATELRLLEVLLDALCKEGHVREASMYLERIGGTMD 243
Query: 519 KGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQI 578
+V + I ++ F + +K+A +M +V P T+ L+ G ++ QI
Sbjct: 244 SNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQI 303
Query: 579 AAEITEKVRKMAAERQITFKMY 600
A E+ E+++ AE +I F ++
Sbjct: 304 AMEVLEEMK--MAEMEINFMVF 323
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 202/424 (47%), Gaps = 7/424 (1%)
Query: 104 PGLTERVINRCGDAGNLGYRYYMWASKQP-NYVHSYDVYRALIKSLSKMRKFGAVWALME 162
P L V+ R + G +++ + YVH + I +++ VW+L+
Sbjct: 56 PNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIH 115
Query: 163 EMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKN 222
MR + + + F I+ R+ASA KA+++ M ++GC D F +LD LCK+
Sbjct: 116 RMRSLRIG-PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKS 174
Query: 223 SSVKEAAKLFDEMRERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYN 282
V++A +LF +R RF + +L GWC + +A VL +M + G P++ YN
Sbjct: 175 KRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYN 234
Query: 283 NLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERS 342
+L G+ + G++ A+E EM+++ C+ + +YT ++ +++ A F EM R
Sbjct: 235 TMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIRE 294
Query: 343 GCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEEC 402
G V TY +I CK ++ + + M++RG PN TY ++ E
Sbjct: 295 GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRG 354
Query: 403 VELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHG 462
ELM M GC P+ YN++IR + E+++A+ ++ +M + P D++ +++ G
Sbjct: 355 EELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Query: 463 FLGQG---CLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTK 519
+ ++ A + EMV RG + P+ T +LN LL AK++
Sbjct: 415 MFVRKRSEDMVVAGKLLLEMVERGFI--PRKFTFNRVLNGLLLTGNQAFAKEILRLQSKS 472
Query: 520 GCEL 523
G L
Sbjct: 473 GSRL 476
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 113/234 (48%), Gaps = 11/234 (4%)
Query: 367 CYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIR 426
+ ++ M I P+ T+ + + + ++ V+L M + GC D++++N ++
Sbjct: 110 VWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILD 169
Query: 427 LACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIE----ACEYFKEMVGR 482
+ CK +++A ++ + S T ++ V+++G+ CLI+ A E KEMV R
Sbjct: 170 VLCKSKRVEKAYELFRALRG-RFSVDTVTYNVILNGW----CLIKRTPKALEVLKEMVER 224
Query: 483 GLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVK 542
G+ P T +L RA ++ A + + + + CE++V +T +H G +K
Sbjct: 225 GI--NPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK 282
Query: 543 EACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRKMAAERQIT 596
A + +M+ V+P T+ +++ L K N + A + E++ + E +T
Sbjct: 283 RARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVT 336
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/437 (27%), Positives = 213/437 (48%), Gaps = 39/437 (8%)
Query: 173 TTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNS-SVKEAAKL 231
T+ VF ++++ ++ ++ KA+ ++ +G P + +LDA ++ ++ A +
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 232 FDEMRE-RFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQ 290
F EM E + P++ + L+ G+C G + A + +M+ G P++V YN L+ GY +
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 291 MGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVT 350
+ K+ D F+LL+ M KG +PN SY V+I LCR +M+E + EM R G D VT
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 351 YTTLISGF-----------------------------------CKSRKIDRCYEILDSMI 375
Y TLI G+ CK+ ++R E LD M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 376 QRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELK 435
RG+ PN+ TY ++ +K + E ++ EM G P V YN +I C G+++
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 436 EAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKA 495
+A+ V +M+ LSP S+ ++ GF + EA +EMV +G+ P T +
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGI--KPDTITYSS 490
Query: 496 LLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDAD 555
L+ ++ + A D++ ++ G + + +T I++ G +++A +M++
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 556 VMPQPDTFAKLMRGLKK 572
V+P T++ L+ GL K
Sbjct: 551 VLPDVVTYSVLINGLNK 567
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 219/457 (47%), Gaps = 23/457 (5%)
Query: 132 PNYVHSYDVYRALIKSLSKMRKFGAVWALMEEM--RKEKPQLITTEVFVILMRRFASARM 189
PN V Y LI K+RK + L+ M + +P LI+ V + + R RM
Sbjct: 238 PNVV----TYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCR--EGRM 291
Query: 190 VKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RERFKPSLRHFTS 248
K+ VL EM + G DE + L+ CK + +A + EM R PS+ +TS
Sbjct: 292 -KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 249 LLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKG 308
L++ CK G + A L QM+ G P+ Y L+ G++Q G M +A+ +L+EM G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 309 CDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCY 368
P+ +Y LI C KME+A +M+ G DVV+Y+T++SGFC+S +D
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 369 EILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLA 428
+ M+++GI P+ +TY ++ ++ +E +L EM ++G PD Y +I
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Query: 429 CKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACE-----YFKEMVGRG 483
C G+L++A+ + NEM + P ++ V+++G Q EA +++E V
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590
Query: 484 LL--------SAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSL 535
+ S ++ ++ +L+ + A V+ ++ K + + A+ I IH
Sbjct: 591 VTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGH 650
Query: 536 FSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKK 572
G +++A + +M+ + + T L++ L K
Sbjct: 651 CRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHK 687
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 172/380 (45%), Gaps = 56/380 (14%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASARMVKKAIEVLD 198
Y LIK K F + EM + P +IT + L+ A + +A+E LD
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT---YTSLIHSMCKAGNMNRAMEFLD 369
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEG 257
+M G P+E + L+D + + EA ++ EM + F PS+ + +L+ G C G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYT 317
K+ +A VL MK+ G PD+V Y+ +LSG+ + + +A + +EM KG P+ +Y+
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 318 VLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQR 377
LIQ C + +EA + EM R G D TYT LI+ +C +++ ++ + M+++
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 378 GILPNQLTY----------------------------------LHIMLAHEKKEELEECV 403
G+LP+ +TY H ++ + E + V
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVV 609
Query: 404 ELM------GEMRKIGCV----------PDVSNYNVVIRLACKLGELKEAVNVWNEMEAA 447
L+ G M + V PD + YN++I C+ G++++A ++ EM +
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669
Query: 448 SLSPGTDSFVVMVHGFLGQG 467
T + + +V +G
Sbjct: 670 GFLLHTVTVIALVKALHKEG 689
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 164/391 (41%), Gaps = 28/391 (7%)
Query: 75 EKIFRILKKFHSRLPKLELALQHSGVVLRPGLTERVINRCG------DAGNLGYRY-YMW 127
E + L K + + AL +LR GLT VI AGN+ ++
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 128 ASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFA 185
+ + Y L+ S+ + ++ EM P ++T + L+
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT---YNALINGHC 426
Query: 186 SARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLR 244
++ AI VL++M + G PD + +L C++ V EA ++ EM E+ KP
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 245 HFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEM 304
++SL+ G+C++ + EA + +M G PD Y L++ Y G + A +L EM
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEM 546
Query: 305 RRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLIS-------- 356
KG P+ +Y+VLI L + + EA R +++ VTY TLI
Sbjct: 547 VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFK 606
Query: 357 -------GFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEM 409
GFC + ++ +SM+ + P+ Y ++ H + ++ + L EM
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Query: 410 RKIGCVPDVSNYNVVIRLACKLGELKEAVNV 440
K G + +++ K G++ E +V
Sbjct: 667 VKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 118/263 (44%), Gaps = 21/263 (7%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASARMVKKAIEVLD 198
Y +LI+ + R+ L EEM + P T + L+ + ++KA+++ +
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT---YTALINAYCMEGDLEKALQLHN 544
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RERFKPS--------------- 242
EM + G PD + L++ L K S +EA +L ++ E PS
Sbjct: 545 EMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIE 604
Query: 243 LRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLK 302
+ SL+ G+C +G + EA V M +PD YN ++ G+ + G + A+ L K
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Query: 303 EMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSR 362
EM + G + + L++AL + K+ E N V + RS ++ L+ +
Sbjct: 665 EMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREG 724
Query: 363 KIDRCYEILDSMIQRGILPNQLT 385
+D ++L M + G LPN ++
Sbjct: 725 NMDVVLDVLAEMAKDGFLPNGIS 747
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 122/469 (26%), Positives = 216/469 (46%), Gaps = 42/469 (8%)
Query: 119 NLGYRYYMWASK-QPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTE-V 176
+L + +++A K P + H+YD Y +++ LS+ R F V +LM ++R P + E +
Sbjct: 63 DLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENL 122
Query: 177 FVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMR 236
F+ L+R + A + ++ + +P +G + LL+ L +N +F +
Sbjct: 123 FIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSK 182
Query: 237 ERFKPSLRHFTS--LLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKM 294
E F + FT L+ CK+ + A VL ++ G P++V Y +L GY G M
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 295 TDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTL 354
A +L+EM +G P+A +YTVL+ C++ + EA +ME++ E + VTY +
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVM 302
Query: 355 ISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGC 414
I CK +K + D M++R +P+ ++ A + +++E L +M K C
Sbjct: 303 IRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNC 362
Query: 415 VPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACE 474
+PD + + +I CK G + EA +++E E S+ P ++ ++ G +G L EA
Sbjct: 363 MPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEA-- 419
Query: 475 YFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHS 534
GR +W + + C+ N + + + I
Sbjct: 420 ------GR-----------------------------LWDDMYERKCKPNAFTYNVLIEG 444
Query: 535 LFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEIT 583
L NG+VKE +M++ P TF L GL+KL + A +I
Sbjct: 445 LSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIV 493
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 122/241 (50%), Gaps = 5/241 (2%)
Query: 140 VYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEV-FVILMRRFASARMVKKAIEVLD 198
Y L+ K+ +F +M++M EK ++ EV + +++R + +A + D
Sbjct: 263 TYTVLMDGYCKLGRFSEAATVMDDM--EKNEIEPNEVTYGVMIRALCKEKKSGEARNMFD 320
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RERFKPSLRHFTSLLYGWCKEG 257
EM + PD + ++DALC++ V EA L+ +M + P ++L++ CKEG
Sbjct: 321 EMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEG 380
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYT 317
++ EA+ + + + G P ++ YN L++G + G++T+A L +M + C PNA +Y
Sbjct: 381 RVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYN 439
Query: 318 VLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQR 377
VLI+ L + ++E R EM GC + T+ L G K K + +I+ +
Sbjct: 440 VLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMN 499
Query: 378 G 378
G
Sbjct: 500 G 500
>sp|Q9FX35|PP117_ARATH Pentatricopeptide repeat-containing protein At1g73400,
mitochondrial OS=Arabidopsis thaliana GN=At1g73400 PE=2
SV=2
Length = 568
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 203/436 (46%), Gaps = 12/436 (2%)
Query: 57 CN-NTTDTHGSHNEFSHDVEKIFRILKKFHSRLPKLELALQHSGVVLRPGLTERVINRCG 115
CN N T GS++ E I L + +E AL S V L + +++ R
Sbjct: 81 CNENDIRTKGSNHAVGILHEAIMANLNAYDD----MEKALDESSVDLTTPVVCKILQRLQ 136
Query: 116 DAGNLGYRYYMWASKQPNYVHSYDVYRALIKSLS----KMRKFGAVWALMEEMRKEKPQL 171
+R++ WA Q +Y H Y +I LS K ++F V +++ M++ +
Sbjct: 137 YEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTV 196
Query: 172 ITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKL 231
+ +V + ++R++ + + + +P+ F LLDALCK VKE L
Sbjct: 197 VLVDVLLEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEAL 256
Query: 232 FDEMRERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQM 291
MR R KP F L +GWC+ +A +L +M +AG +P+ Y + + Q
Sbjct: 257 LRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQA 316
Query: 292 GKMTDAFELLKEMRRKGCD---PNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADV 348
G + +A +L M KG P A ++ ++I AL + +K EE M +GC DV
Sbjct: 317 GMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDV 376
Query: 349 VTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGE 408
TY +I G C + K+D Y+ LD M +G P+ +TY + + + +E ++L G
Sbjct: 377 STYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGR 436
Query: 409 MRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGC 468
M + C P V YN++I + ++ + A N W EM+ +++ M++G
Sbjct: 437 MVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHR 496
Query: 469 LIEACEYFKEMVGRGL 484
EAC +E+V +GL
Sbjct: 497 AKEACFLLEEVVNKGL 512
Score = 120 bits (300), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 149/320 (46%), Gaps = 10/320 (3%)
Query: 275 EPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANR 334
+P+I +N LL + G + + LL+ MR + P+AN++ VL CR+ ++A +
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 335 AFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGIL---PNQLTYLHIML 391
EM +G + + TY I FC++ +D ++ D MI +G P T+ +++
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 392 AHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSP 451
A K ++ EEC EL+G M GC+PDVS Y VI C ++ EA +EM P
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 452 GTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLS--APQYGTLKALLNSLLRAQKVEMA 509
+V + FL C + ++ GR + S AP T L++ + A
Sbjct: 410 D----IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGA 465
Query: 510 KDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRG 569
+ W+ + + C +V + I+ LF KEAC ++++ + F +
Sbjct: 466 FNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMR 525
Query: 570 LKKLYNRQIAAEITEKVRKM 589
L ++ N + +++E ++K
Sbjct: 526 LSEVGNLKAIHKVSEHMKKF 545
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 125/474 (26%), Positives = 226/474 (47%), Gaps = 9/474 (1%)
Query: 160 LMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDAL 219
++EM + F L+ A VK AIE++D M + G +PD + + ++ L
Sbjct: 281 FIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGL 340
Query: 220 CKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDI 278
CK VKEA ++ D+M R P+ + +L+ CKE ++ EA + + G PD+
Sbjct: 341 CKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDV 400
Query: 279 VVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVE 338
+N+L+ G A EL +EMR KGC+P+ +Y +LI +LC K++EA +
Sbjct: 401 CTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 339 MERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEE 398
ME SGC V+TY TLI GFCK+ K EI D M G+ N +TY ++ K
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 399 LEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVV 458
+E+ +LM +M G PD YN ++ C+ G++K+A ++ M + P ++
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 459 MVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVT 518
++ G G + A + + + +G+ P ++ L R +K A +++ ++
Sbjct: 581 LISGLCKAGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLFREMLE 638
Query: 519 KG-CELNVYAWTIWIHSLFS-NGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNR 576
+ + ++ I L + G ++EA + +++++ +P+ + L GL L
Sbjct: 639 QNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSME 698
Query: 577 QIAAEITEKVRKMA--AERQITF--KMYKRRGERDLKEKAKKQVDGRKRRARQR 626
+ ++ V + A +E +++ + K R +D +D R+ R R
Sbjct: 699 ETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQPRRTYR 752
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 206/452 (45%), Gaps = 49/452 (10%)
Query: 156 AVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDE------ 209
+VW + KP + T F +L++ A ++ AI +L++MP YG PDE
Sbjct: 181 SVWGI-------KPDVST---FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTV 230
Query: 210 --------------------FVFGC---------LLDALCKNSSVKEAAKLFDEM--RER 238
FGC ++ CK V++A EM ++
Sbjct: 231 MQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 290
Query: 239 FKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAF 298
F P F +L+ G CK G + A ++ M G++PD+ YN+++SG ++G++ +A
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
Query: 299 ELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGF 358
E+L +M + C PN +Y LI LC+ ++EEA + G DV T+ +LI G
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 359 CKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDV 418
C +R E+ + M +G P++ TY ++ + K +L+E + ++ +M GC V
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470
Query: 419 SNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKE 478
YN +I CK + +EA +++EME +S + ++ ++ G + +A + +
Sbjct: 471 ITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ 530
Query: 479 MVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSN 538
M+ G P T +LL R ++ A D+ + + GCE ++ + I L
Sbjct: 531 MIMEG--QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 588
Query: 539 GHVKEACSYCLDMMDADVMPQPDTFAKLMRGL 570
G V+ A + + P + +++GL
Sbjct: 589 GRVEVASKLLRSIQMKGINLTPHAYNPVIQGL 620
Score = 172 bits (436), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 124/538 (23%), Positives = 237/538 (44%), Gaps = 76/538 (14%)
Query: 123 RYYMWASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMR 182
R + ASK+PN+ +Y ++ L + F + ++E+M+ + ++ T F+IL+
Sbjct: 68 RLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM-GTSTFLILIE 126
Query: 183 RFASARMVKKAIEVLD------------------------------------EMPKYGCE 206
+A + + + V+D +M +G +
Sbjct: 127 SYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIK 186
Query: 207 PDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTS----------------- 248
PD F L+ ALC+ ++ A + ++M P + FT+
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 249 ------------------LLYGWCKEGKLVEAKYVLVQMKDA-GFEPDIVVYNNLLSGYA 289
+++G+CKEG++ +A + +M + GF PD +N L++G
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 290 QMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVV 349
+ G + A E++ M ++G DP+ +Y +I LC++ +++EA +M C + V
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 350 TYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEM 409
TY TLIS CK +++ E+ + +GILP+ T+ ++ +EL EM
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEM 426
Query: 410 RKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCL 469
R GC PD YN++I C G+L EA+N+ +ME + + ++ ++ GF
Sbjct: 427 RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKT 486
Query: 470 IEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWT 529
EA E F EM G+ + T L++ L ++++VE A + ++ +G + + Y +
Sbjct: 487 REAEEIFDEMEVHGV--SRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544
Query: 530 IWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVR 587
+ G +K+A M P T+ L+ GL K ++A+++ ++
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQ 602
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 174/390 (44%), Gaps = 7/390 (1%)
Query: 215 LLDALCKNSSVKEAAKLFD--EMRERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDA 272
LLD+L A +LF+ + F P + +L + G + K +L MK +
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 273 GFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRK-GCDPNANSYTVLIQALCRMEKMEE 331
E + L+ YAQ + ++ M + G P+ + Y ++ L ++
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKL 172
Query: 332 ANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIML 391
+ +M G + DV T+ LI C++ ++ +L+ M G++P++ T+ +M
Sbjct: 173 VEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ 232
Query: 392 AHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAA-SLS 450
+ ++ +L+ + + +M + GC + NV++ CK G +++A+N EM
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292
Query: 451 PGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAK 510
P +F +V+G G + A E M+ G P T ++++ L + +V+ A
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY--DPDVYTYNSVISGLCKLGEVKEAV 350
Query: 511 DVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGL 570
+V ++T+ C N + I +L V+EA + ++P TF L++GL
Sbjct: 351 EVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Query: 571 KKLYNRQIAAEITEKVRKMAAE-RQITFKM 599
N ++A E+ E++R E + T+ M
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 191/381 (50%), Gaps = 3/381 (0%)
Query: 190 VKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RERFKPSLRHFTS 248
+K+A +L M G PD + +++ C+ + + KL + M R+ KP+ + S
Sbjct: 262 IKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGS 321
Query: 249 LLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKG 308
++ C+ KL EA+ +M G PD VVY L+ G+ + G + A + EM +
Sbjct: 322 IIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD 381
Query: 309 CDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCY 368
P+ +YT +I C++ M EA + F EM G E D VT+T LI+G+CK+ + +
Sbjct: 382 ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAF 441
Query: 369 EILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLA 428
+ + MIQ G PN +TY ++ K+ +L+ EL+ EM KIG P++ YN ++
Sbjct: 442 RVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGL 501
Query: 429 CKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAP 488
CK G ++EAV + E EAA L+ T ++ ++ + G + +A E KEM+G+GL P
Sbjct: 502 CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL--QP 559
Query: 489 QYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYC 548
T L+N +E + + + ++ KG N + + ++K A +
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 619
Query: 549 LDMMDADVMPQPDTFAKLMRG 569
DM V P T+ L++G
Sbjct: 620 KDMCSRGVGPDGKTYENLVKG 640
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 192/411 (46%), Gaps = 43/411 (10%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASARMVKKAIEVLD 198
Y ++ + + VW L+E M+++ KP + L+ R + +A E
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK---LAEAEEAFS 340
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEG 257
EM + G PD V+ L+D CK ++ A+K F EM R P + +T+++ G+C+ G
Sbjct: 341 EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 400
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYT 317
+VEA + +M G EPD V + L++GY + G M DAF + M + GC PN +YT
Sbjct: 401 DMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYT 460
Query: 318 VLIQALCRMEKMEEANRAFVEM-----------------------------------ERS 342
LI LC+ ++ AN EM E +
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA 520
Query: 343 GCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEEC 402
G AD VTYTTL+ +CKS ++D+ EIL M+ +G+ P +T+ +M LE+
Sbjct: 521 GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG 580
Query: 403 VELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHG 462
+L+ M G P+ + +N +++ C LK A ++ +M + + P ++ +V G
Sbjct: 581 EKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKG 640
Query: 463 FLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVW 513
+ EA F+EM G+G + T L+ L+ +K A++V+
Sbjct: 641 HCKARNMKEAWFLFQEMKGKGF--SVSVSTYSVLIKGFLKRKKFLEAREVF 689
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 188/397 (47%), Gaps = 4/397 (1%)
Query: 176 VFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNS-SVKEAAKLFDE 234
VF + + ++++A V ++M YG L L K+ A +F E
Sbjct: 177 VFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 235 MRE-RFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGK 293
E ++ + +++ C+ G++ EA ++L+ M+ G+ PD++ Y+ +++GY + G+
Sbjct: 237 FPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGE 296
Query: 294 MTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTT 353
+ ++L++ M+RKG PN+ Y +I LCR+ K+ EA AF EM R G D V YTT
Sbjct: 297 LDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTT 356
Query: 354 LISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIG 413
LI GFCK I + M R I P+ LTY I+ + ++ E +L EM G
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 414 CVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEAC 473
PD + +I CK G +K+A V N M A SP ++ ++ G +G L A
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476
Query: 474 EYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIH 533
E EM GL P T +++N L ++ +E A + G + +T +
Sbjct: 477 ELLHEMWKIGL--QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
Query: 534 SLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGL 570
+ +G + +A +M+ + P TF LM G
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGF 571
Score = 139 bits (349), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 157/338 (46%), Gaps = 12/338 (3%)
Query: 128 ASKQPNYVHSYDV------YRALIKSLSKMRKFGAVWALMEEM--RKEKPQLITTEVFVI 179
ASK +HS D+ Y A+I ++ L EM + +P +T F
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT---FTE 426
Query: 180 LMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RER 238
L+ + A +K A V + M + GC P+ + L+D LCK + A +L EM +
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 239 FKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAF 298
+P++ + S++ G CK G + EA ++ + + AG D V Y L+ Y + G+M A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 299 ELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGF 358
E+LKEM KG P ++ VL+ C +E+ + M G + T+ +L+ +
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 359 CKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDV 418
C + I M RG+ P+ TY +++ H K ++E L EM+ G V
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 419 SNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSF 456
S Y+V+I+ K + EA V+++M L+ + F
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 179/369 (48%), Gaps = 8/369 (2%)
Query: 257 GKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQ-MGKMTDAFELLKEMRRKGCDPNANS 315
G L EA+ V +M + G + N L+ ++ K A + +E G N S
Sbjct: 189 GLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVAS 248
Query: 316 YTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMI 375
Y ++I +C++ +++EA+ + ME G DV++Y+T+++G+C+ ++D+ +++++ M
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308
Query: 376 QRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELK 435
++G+ PN Y I+ + +L E E EM + G +PD Y +I CK G+++
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 436 EAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKA 495
A + EM + ++P ++ ++ GF G ++EA + F EM +GL P T
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGL--EPDSVTFTE 426
Query: 496 LLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDAD 555
L+N +A ++ A V + ++ GC NV +T I L G + A +M
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 556 VMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRKMAAERQ-ITFKM----YKRRGERDLKE 610
+ P T+ ++ GL K N + A ++ + +T+ Y + GE D +
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 611 KAKKQVDGR 619
+ K++ G+
Sbjct: 547 EILKEMLGK 555
Score = 92.4 bits (228), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 7/261 (2%)
Query: 126 MW-ASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRF 184
MW QPN Y +++ L K L+ E T + LM +
Sbjct: 482 MWKIGLQPNIF----TYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN-ADTVTYTTLMDAY 536
Query: 185 ASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSL 243
+ + KA E+L EM G +P F L++ C + +++ KL + M + P+
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596
Query: 244 RHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKE 303
F SL+ +C L A + M G PD Y NL+ G+ + M +A+ L +E
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656
Query: 304 MRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRK 363
M+ KG + ++Y+VLI+ + +K EA F +M R G AD + K ++
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716
Query: 364 IDRCYEILDSMIQRGILPNQL 384
D + +D +I+ ++ QL
Sbjct: 717 PDTIVDPIDEIIENYLVDEQL 737
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 198/438 (45%), Gaps = 8/438 (1%)
Query: 136 HSYDVYRALIKSLSKMRKFGAVWALMEEMRK--EKPQLITTEVFVILMRRFASARMVKKA 193
H+ Y LI + + A++ +M K +P ++T L+ F + A
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNS---LLNGFCHGNRISDA 170
Query: 194 IEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYG 252
+ ++ +M + G +PD F F L+ L +++ EA L D M + +P L + ++ G
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 253 WCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPN 312
CK G + A +L +M+ EP +V+YN ++ + DA L EM KG PN
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 313 ANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILD 372
+Y LI+ LC + +A+R +M +VVT++ LI F K K+ ++ D
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 373 SMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLG 432
MI+R I P+ TY ++ + L+E + M C P+V YN +I+ CK
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 433 ELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGT 492
+ E + ++ EM L T ++ ++HGF A FK+MV G+L P T
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL--PDIMT 468
Query: 493 LKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMM 552
LL+ L KVE A V+ + E ++Y + I I + G V++ +
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 553 DADVMPQPDTFAKLMRGL 570
V P T+ +M G
Sbjct: 529 LKGVKPNVVTYTTMMSGF 546
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 199/392 (50%), Gaps = 16/392 (4%)
Query: 131 QPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEK--PQLITTEVFVILMRRFASAR 188
QP+ V Y ++ L K +L+++M + K P ++ ++ ++ + +
Sbjct: 218 QPDLV----TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVV---IYNTIIDALCNYK 270
Query: 189 MVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFT 247
V A+ + EM G P+ + L+ LC +A++L +M ER P++ F+
Sbjct: 271 NVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 330
Query: 248 SLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRK 307
+L+ + KEGKLVEA+ + +M +PDI Y++L++G+ ++ +A + + M K
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Query: 308 GCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRC 367
C PN +Y LI+ C+ ++++E F EM + G + VTYTTLI GF ++R+ D
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA 450
Query: 368 YEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRL 427
+ M+ G+LP+ +TY ++ ++E + + +++ PD+ YN++I
Sbjct: 451 QIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEG 510
Query: 428 ACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSA 487
CK G++++ +++ + + P ++ M+ GF +G EA F+EM G L
Sbjct: 511 MCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL-- 568
Query: 488 PQYGTLKALLNSLLR----AQKVEMAKDVWSC 515
P GT L+ + LR A E+ +++ SC
Sbjct: 569 PDSGTYNTLIRAHLRDGDKAASAELIREMRSC 600
Score = 159 bits (401), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 179/382 (46%), Gaps = 3/382 (0%)
Query: 190 VKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRE-RFKPSLRHFTS 248
+ A+ + +M K P F LL A+ K + L ++M+ +L ++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 249 LLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKG 308
L+ +C+ +L A VL +M G+EPDIV N+LL+G+ +++DA L+ +M G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 309 CDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCY 368
P++ ++ LI L R + EA M GC+ D+VTY +++G CK ID
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 369 EILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLA 428
+L M Q I P + Y I+ A + + + + L EM G P+V YN +IR
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 429 CKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAP 488
C G +A + ++M ++P +F ++ F+ +G L+EA + + EM+ R + P
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI--DP 359
Query: 489 QYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYC 548
T +L+N +++ AK ++ +++K C NV + I V E
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 549 LDMMDADVMPQPDTFAKLMRGL 570
+M ++ T+ L+ G
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGF 441
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 210/461 (45%), Gaps = 9/461 (1%)
Query: 138 YDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVL 197
YD + I L+ ++ AV L +M K +P E F L+ A I +
Sbjct: 47 YDYRKISINRLNDLKLDDAV-NLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVISLG 104
Query: 198 DEMPKYGCEPDEFVFGCLLDALCKNSSVKEA-AKLFDEMRERFKPSLRHFTSLLYGWCKE 256
++M G + + + L++ C+ S + A A L M+ ++P + SLL G+C
Sbjct: 105 EQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHG 164
Query: 257 GKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSY 316
++ +A ++ QM + G++PD +N L+ G + + ++A L+ M KGC P+ +Y
Sbjct: 165 NRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY 224
Query: 317 TVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQ 376
+++ LC+ ++ A +ME+ E VV Y T+I C + ++ + M
Sbjct: 225 GIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDN 284
Query: 377 RGILPNQLTYLHIMLAHEKKEELEECVELMGEM--RKIGCVPDVSNYNVVIRLACKLGEL 434
+GI PN +TY ++ + L+ +M RKI P+V ++ +I K G+L
Sbjct: 285 KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKIN--PNVVTFSALIDAFVKEGKL 342
Query: 435 KEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLK 494
EA +++EM S+ P ++ +++GF L EA F+ M+ + P T
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF--PNVVTYN 400
Query: 495 ALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDA 554
L+ +A++V+ +++ + +G N +T IH F A M+
Sbjct: 401 TLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD 460
Query: 555 DVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRKMAAERQI 595
V+P T++ L+ GL + A + E +++ E I
Sbjct: 461 GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 173/383 (45%), Gaps = 50/383 (13%)
Query: 86 SRLPKLELALQHSGVVLRPGLTERVIN--RCGDAGNLGYRYYMWASKQPNYVHSYDVYRA 143
S L K+E GVV+ + + + N DA NL + +PN V Y +
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNL-FTEMDNKGIRPNVV----TYNS 296
Query: 144 LIKSLSKMRKFGAVWALMEEM--RKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEMP 201
LI+ L ++ L+ +M RK P ++T F L+ F + +A ++ DEM
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVT---FSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 202 KYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM--RERFKPSLRHFTSLLYGWCKEGKL 259
K +PD F + L++ C + + EA +F+ M ++ F P++ + +L+ G+CK ++
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRV 412
Query: 260 VE-----------------------------------AKYVLVQMKDAGFEPDIVVYNNL 284
E A+ V QM G PDI+ Y+ L
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSIL 472
Query: 285 LSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGC 344
L G GK+ A + + ++R +P+ +Y ++I+ +C+ K+E+ F + G
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 345 EADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVE 404
+ +VVTYTT++SGFC+ + + M + G LP+ TY ++ AH + + E
Sbjct: 533 KPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAE 592
Query: 405 LMGEMRKIGCVPDVSNYNVVIRL 427
L+ EMR V D S +V +
Sbjct: 593 LIREMRSCRFVGDASTIGLVTNM 615
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/435 (28%), Positives = 212/435 (48%), Gaps = 8/435 (1%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASARMVKKAIEVLD 198
+ L+ +++KM KF V +L E+M+ L T +F+ F + A+ VL
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI---NCFCRRSQLSLALAVLA 142
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEG 257
+M K G EPD LL+ C + + +A L D+M E +KP FT+L++G
Sbjct: 143 KMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYT 317
K EA ++ QM G +PD+V Y +++G + G + A LLK+M + + + Y
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 318 VLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQR 377
+I LC+ + M++A F EM+ G DV TY++LIS C + +L MI+R
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 378 GILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEA 437
I PN +T+ ++ A K+ +L E +L EM K PD+ Y+ +I C L EA
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 438 VNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALL 497
+++ M + P ++ ++ GF + E E F+EM RGL+ T L+
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV--TYTTLI 440
Query: 498 NSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVM 557
+ +A+ + A+ V+ +V+ G N+ + I + L NG + +A + + +
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 558 PQPDTFAKLMRGLKK 572
P T+ ++ G+ K
Sbjct: 501 PDIYTYNIMIEGMCK 515
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 195/390 (50%), Gaps = 12/390 (3%)
Query: 131 QPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMV 190
QP+ V Y ++ L K +L+++M K K + ++ ++ + +
Sbjct: 220 QPDLV----TYGTVVNGLCKRGDIDLALSLLKKMEKGKIE-ADVVIYNTIIDGLCKYKHM 274
Query: 191 KKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSL 249
A+ + EM G PD F + L+ LC +A++L +M ER P++ F++L
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 334
Query: 250 LYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGC 309
+ + KEGKLVEA+ + +M +PDI Y++L++G+ ++ +A + + M K C
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394
Query: 310 DPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYE 369
PN +Y+ LI+ C+ +++EE F EM + G + VTYTTLI GF ++R D
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454
Query: 370 ILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLAC 429
+ M+ G+ PN LTY ++ K +L + + + +++ PD+ YN++I C
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 430 KLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQ 489
K G++++ ++ + +SP ++ M+ GF +G EA K+M G L P
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL--PN 572
Query: 490 YGTLKALLNSLL----RAQKVEMAKDVWSC 515
GT L+ + L R E+ K++ SC
Sbjct: 573 SGTYNTLIRARLRDGDREASAELIKEMRSC 602
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/459 (25%), Positives = 211/459 (45%), Gaps = 9/459 (1%)
Query: 141 YRALIKS-LSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDE 199
YR ++++ LS + K L +M K +P E F L+ A + I + ++
Sbjct: 50 YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVE-FNKLLSAVAKMNKFELVISLGEQ 108
Query: 200 MPKYGCEPDEFVFGCLLDALCKNSSVKEA-AKLFDEMRERFKPSLRHFTSLLYGWCKEGK 258
M G D + + ++ C+ S + A A L M+ ++P + +SLL G+C +
Sbjct: 109 MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 259 LVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTV 318
+ +A ++ QM + G++PD + L+ G K ++A L+ +M ++GC P+ +Y
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228
Query: 319 LIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRG 378
++ LC+ ++ A +ME+ EADVV Y T+I G CK + +D + M +G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288
Query: 379 ILPNQLTYLHIMLAHEKKEELEECVELMGEM--RKIGCVPDVSNYNVVIRLACKLGELKE 436
I P+ TY ++ + L+ +M RKI P+V ++ +I K G+L E
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN--PNVVTFSALIDAFVKEGKLVE 346
Query: 437 AVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKAL 496
A +++EM S+ P ++ +++GF L EA F+ M+ + P T L
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF--PNVVTYSTL 404
Query: 497 LNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADV 556
+ +A++VE +++ + +G N +T IH F A M+ V
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 557 MPQPDTFAKLMRGLKKLYNRQIAAEITEKVRKMAAERQI 595
P T+ L+ GL K A + E +++ E I
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 167/331 (50%), Gaps = 9/331 (2%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEM--RKEKPQLITTEVFVILMRRFASARMVKKAIEVLD 198
Y +LI L ++ L+ +M RK P ++T F L+ F + +A ++ D
Sbjct: 296 YSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT---FSALIDAFVKEGKLVEAEKLYD 352
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM--RERFKPSLRHFTSLLYGWCKE 256
EM K +PD F + L++ C + + EA +F+ M ++ F P++ +++L+ G+CK
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYSTLIKGFCKA 411
Query: 257 GKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSY 316
++ E + +M G + V Y L+ G+ Q +A + K+M G PN +Y
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 317 TVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQ 376
+L+ LC+ K+ +A F ++RS E D+ TY +I G CK+ K++ +E+ ++
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 377 RGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKE 436
+G+ PN + Y ++ +K EE L+ +M++ G +P+ YN +IR + G+ +
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591
Query: 437 AVNVWNEMEAASLSPGTDSFVVMVHGFLGQG 467
+ + EM + + G S + +V L G
Sbjct: 592 SAELIKEMRSCGFA-GDASTIGLVTNMLHDG 621
>sp|Q9LIL5|PP233_ARATH Putative pentatricopeptide repeat-containing protein At3g15200
OS=Arabidopsis thaliana GN=At3g15200 PE=3 SV=1
Length = 523
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 212/430 (49%), Gaps = 12/430 (2%)
Query: 68 NEFSHDVEK-----IFRILKKFHSRLP-KLELALQHSGVVLRPGLTERVINRCGDAGNLG 121
N F+ D +K + I+K P K++ L G+ L L V+NR
Sbjct: 67 NRFNDDKDKQSALDVHNIIKHHRGSSPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPA 126
Query: 122 YRYYMWASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILM 181
Y KQ ++ S +Y ++ L KMR+F + +EM K + + + + +L+
Sbjct: 127 YILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSK-RDGFVNEKTYEVLL 185
Query: 182 RRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERFKP 241
R+A+A V +A+ V + ++G + D F LL LC+ V+ A LF R F
Sbjct: 186 NRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC 245
Query: 242 SLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELL 301
++ +L GWC G + EAK + + PD+V Y +++ + GK+ A EL
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELY 305
Query: 302 KEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKS 361
+ M +P+ +I ALC +++ EA F E+ G + +VVTY +L+ CK
Sbjct: 306 RAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKI 365
Query: 362 RKIDRCYEILDSMIQRG--ILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVS 419
R+ ++ +E+++ M +G PN +T+ +++ ++ ++++ +E M K C
Sbjct: 366 RRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMA---KNKCEMTSD 422
Query: 420 NYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEM 479
YN++ RL + + ++ +W+EME + L P ++ + +HG +G + EA YF+EM
Sbjct: 423 LYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEM 482
Query: 480 VGRGLLSAPQ 489
+ +G++ P+
Sbjct: 483 MSKGMVPEPR 492
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 168/358 (46%), Gaps = 15/358 (4%)
Query: 211 VFGCLLDALCKNSSVKEAAKLFDEMRERFK-PSLRHFTSLLYGWCKEGKLVEAKYVLVQM 269
++ +LD L K +E ++FDEM +R + + + LL + K+ EA V +
Sbjct: 145 LYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERR 204
Query: 270 KDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRK-GCDPNANSYTVLIQALCRMEK 328
K+ G + D+V ++ LL + + A L RR+ GCD A +++ C +
Sbjct: 205 KEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKA--MNMILNGWCVLGN 262
Query: 329 MEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLH 388
+ EA R + ++ S C DVV+Y T+I+ K K+ + E+ +M P+ +
Sbjct: 263 VHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNN 322
Query: 389 IMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEME--A 446
++ A K+ + E +E+ E+ + G P+V YN +++ CK+ ++ + EME
Sbjct: 323 VIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Query: 447 ASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGL--LSAPQYGTLKALLNSLLRAQ 504
S SP +F + L + + E + + +++ Y + L ++
Sbjct: 383 GSCSPNDVTFSYL----LKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLY---VQWD 435
Query: 505 KVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDT 562
K E +++WS + G + +TI IH L + G + EA SY +MM ++P+P T
Sbjct: 436 KEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 97/232 (41%), Gaps = 13/232 (5%)
Query: 141 YRALIKSLSKMRKFGAVWAL---MEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVL 197
Y +I +L+K K G L M + R+ I V L + + +A+EV
Sbjct: 285 YGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDAL----CFKKRIPEALEVF 340
Query: 198 DEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERF---KPSLRHFTSLLYGWC 254
E+ + G +P+ + LL LCK ++ +L +EM + P+ F+ LL +
Sbjct: 341 REISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLL-KYS 399
Query: 255 KEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNAN 314
+ K V+ VL +M E +YN + Y Q K E+ EM R G P+
Sbjct: 400 QRSKDVDI--VLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQR 457
Query: 315 SYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDR 366
+YT+ I L K+ EA F EM G + T L K R D+
Sbjct: 458 TYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLLNQNKTKPRVEDK 509
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 73/199 (36%), Gaps = 56/199 (28%)
Query: 131 QPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMV 190
PN V Y +L+K L K+R+ VW L+EEM
Sbjct: 349 DPNVV----TYNSLLKHLCKIRRTEKVWELVEEM-------------------------- 378
Query: 191 KKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERFKPSLRHFTSLL 250
E+ C P++ F LL + +K D + ER + TS L
Sbjct: 379 --------ELKGGSCSPNDVTFSYLL-------KYSQRSKDVDIVLERMAKNKCEMTSDL 423
Query: 251 YG--------WCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLK 302
Y W KE K+ E + +M+ +G PD Y + G GK+ +A +
Sbjct: 424 YNLMFRLYVQWDKEEKVRE---IWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQ 480
Query: 303 EMRRKGCDPNANSYTVLIQ 321
EM KG P + +L Q
Sbjct: 481 EMMSKGMVPEPRTEMLLNQ 499
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 144/515 (27%), Positives = 230/515 (44%), Gaps = 68/515 (13%)
Query: 127 WASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFAS 186
W S+ P Y HS Y +L+ L G V F I + S
Sbjct: 112 WISQNPRYKHSVYSYASLLTLLINNGYVGVV-------------------FKIRLLMIKS 152
Query: 187 ARMVKKAIEVLDEMPKYGCEPDE-------FVFGC---LLDALCKNSSVKEAAKLFDEMR 236
V A+ VLD K DE + GC LL++L + V E +++ EM
Sbjct: 153 CDSVGDALYVLDLCRKMN--KDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEML 210
Query: 237 E-RFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMT 295
E + P++ + ++ G+CK G + EA + ++ +AG +PD Y +L+ GY Q +
Sbjct: 211 EDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLD 270
Query: 296 DAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLI 355
AF++ EM KGC N +YT LI LC +++EA FV+M+ C V TYT LI
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLI 330
Query: 356 SGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCV 415
C S + ++ M + GI PN TY ++ + + + E+ EL+G+M + G +
Sbjct: 331 KSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLM 390
Query: 416 PDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFL----------- 464
P+V YN +I CK G +++AV+V ME+ LSP T ++ ++ G+
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVL 450
Query: 465 --------------------GQ---GCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLL 501
GQ G A M RGL+ P T ++++SL
Sbjct: 451 NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV--PDQWTYTSMIDSLC 508
Query: 502 RAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPD 561
++++VE A D++ + KG NV +T I G V EA M+ + +P
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 562 TFAKLMRGLKKLYNRQIAAEITEKVRKMAAERQIT 596
TF L+ GL + A + EK+ K+ + ++
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVS 603
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/427 (23%), Positives = 193/427 (45%), Gaps = 31/427 (7%)
Query: 140 VYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDE 199
Y +LI + F + + L+ M ++ + + ++ ++ V++A ++ D
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMN-DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 200 MPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEGK 258
+ + G P+ ++ L+D CK V EA + ++M + P+ F +L++G C +GK
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 259 LVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTV 318
L EA + +M G +P + L+ + G A+ ++M G P+A++YT
Sbjct: 583 LKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTT 642
Query: 319 LIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRG 378
IQ CR ++ +A +M +G D+ TY++LI G+ + + +++L M G
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 379 ILPNQLTYLHIM-------LAHEKKEELEEC-----------VELMGEMRKIGCVPDVSN 420
P+Q T+L ++ +K E E C VEL+ +M + P+ +
Sbjct: 703 CEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKS 762
Query: 421 YNVVIRLACKLGELKEAVNVWNEME-AASLSPGTDSFVVMVHGFLGQGCLI----EACEY 475
Y +I C++G L+ A V++ M+ +SP F + L C + EA +
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVF----NALLSCCCKLKKHNEAAKV 818
Query: 476 FKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSL 535
+M+ G L PQ + K L+ L + + E V+ ++ G + AW I I +
Sbjct: 819 VDDMICVGHL--PQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGV 876
Query: 536 FSNGHVK 542
G V+
Sbjct: 877 GKQGLVE 883
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/461 (23%), Positives = 207/461 (44%), Gaps = 30/461 (6%)
Query: 131 QPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEK--PQLITTEVFVILMRRFASAR 188
+PN +H+Y V LI SL KF L+ +M ++ P +IT + L+ +
Sbjct: 355 KPN-IHTYTV---LIDSLCSQCKFEKARELLGQMLEKGLMPNVIT---YNALINGYCKRG 407
Query: 189 MVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFT 247
M++ A++V++ M P+ + L+ CK S+V +A + ++M ER P + +
Sbjct: 408 MIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYN 466
Query: 248 SLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRK 307
SL+ G C+ G A +L M D G PD Y +++ + ++ +A +L + +K
Sbjct: 467 SLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 308 GCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRC 367
G +PN YT LI C+ K++EA+ +M C + +T+ LI G C K+
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 368 YEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRL 427
+ + M++ G+ P T ++ K + + +M G PD Y I+
Sbjct: 587 TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQT 646
Query: 428 ACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSA 487
C+ G L +A ++ +M +SP ++ ++ G+ G A + K M G
Sbjct: 647 YCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG--CE 704
Query: 488 PQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSY 547
P T +L+ LL + + KG E + A + ++ V E
Sbjct: 705 PSQHTFLSLIKHLLEMKYGKQ----------KGSEPELCAMS----NMMEFDTVVELLE- 749
Query: 548 CLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRK 588
M++ V P ++ KL+ G+ ++ N ++A ++ + +++
Sbjct: 750 --KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR 788
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 167/415 (40%), Gaps = 95/415 (22%)
Query: 140 VYRALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASARMVKKAIEVL 197
Y ++I SL K ++ L + + ++ P ++ ++ L+ + A V +A +L
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVV---MYTALIDGYCKAGKVDEAHLML 555
Query: 198 DEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKL-------------------------- 231
++M C P+ F L+ LC + +KEA L
Sbjct: 556 EKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Query: 232 --FDEMRERF--------KPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVY 281
FD RF KP +T+ + +C+EG+L++A+ ++ +M++ G PD+ Y
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 282 NNLLSGYAQMGKMTDAFELLKEMRRKGCDP------------------------------ 311
++L+ GY +G+ AF++LK MR GC+P
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM 735
Query: 312 -----------------------NANSYTVLIQALCRMEKMEEANRAFVEMERS-GCEAD 347
NA SY LI +C + + A + F M+R+ G
Sbjct: 736 SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPS 795
Query: 348 VVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMG 407
+ + L+S CK +K + +++D MI G LP + ++ KK E E +
Sbjct: 796 ELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQ 855
Query: 408 EMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHG 462
+ + G D + ++I K G ++ ++N ME + ++ +++ G
Sbjct: 856 NLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 179 bits (454), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 176/322 (54%), Gaps = 3/322 (0%)
Query: 180 LMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RER 238
L+ F V A+ ++D+M + G +PD + ++D+LCK V +A F E+ R+
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG 220
Query: 239 FKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAF 298
+P++ +T+L+ G C + +A +L M P+++ Y+ LL + + GK+ +A
Sbjct: 221 IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 299 ELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGF 358
EL +EM R DP+ +Y+ LI LC ++++EAN+ F M GC ADVV+Y TLI+GF
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 359 CKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDV 418
CK+++++ ++ M QRG++ N +TY ++ + ++++ E +M G PD+
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 419 SNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKE 478
YN+++ C GEL++A+ ++ +M+ + ++ ++ G G + EA F
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 479 MVGRGLLSAPQYGTLKALLNSL 500
+ +GL P T +++ L
Sbjct: 461 LSLKGL--KPDIVTYTTMMSGL 480
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 203/428 (47%), Gaps = 8/428 (1%)
Query: 148 LSKMR----KFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKY 203
LSK R K L +M K +P + F L+ + I + +M
Sbjct: 56 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVD-FNRLLSAIVKLKKYDVVISLGKKMEVL 114
Query: 204 GCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RERFKPSLRHFTSLLYGWCKEGKLVEA 262
G D + F +++ C V A + +M + ++P SL+ G+C+ ++ +A
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 263 KYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQA 322
++ +M + G++PDIV YN ++ + ++ DAF+ KE+ RKG PN +YT L+
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 323 LCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPN 382
LC + +A R +M + +V+TY+ L+ F K+ K+ E+ + M++ I P+
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPD 294
Query: 383 QLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWN 442
+TY ++ + ++E ++ M GC+ DV +YN +I CK +++ + ++
Sbjct: 295 IVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFR 354
Query: 443 EMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLR 502
EM L T ++ ++ GF G + +A E+F +M G+ +P T LL L
Sbjct: 355 EMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI--SPDIWTYNILLGGLCD 412
Query: 503 AQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDT 562
++E A ++ + + +L++ +T I + G V+EA S + + P T
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 563 FAKLMRGL 570
+ +M GL
Sbjct: 473 YTTMMSGL 480
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 196/402 (48%), Gaps = 15/402 (3%)
Query: 180 LMRRFASARM----VKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM 235
L R + R+ + AI++ +M K P F LL A+ K L +M
Sbjct: 52 LRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM 111
Query: 236 RER-FKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKM 294
+ L F ++ +C ++ A +L +M G+EPD V +L++G+ + ++
Sbjct: 112 EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171
Query: 295 TDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTL 354
+DA L+ +M G P+ +Y +I +LC+ +++ +A F E+ER G +VVTYT L
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 355 ISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGC 414
++G C S + +L MI++ I PN +TY ++ A K ++ E EL EM ++
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Query: 415 VPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACE 474
PD+ Y+ +I C + EA +++ M + S+ +++GF + + +
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMK 351
Query: 475 YFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHS 534
F+EM RGL+S T L+ +A V+ A++ +S + G +++ + I +
Sbjct: 352 LFREMSQRGLVSNTV--TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 535 LFSNGHVKEACSYCLDM----MDADVMPQPDTFAKLMRGLKK 572
L NG +++A DM MD D++ T+ ++RG+ K
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIV----TYTTVIRGMCK 447
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 164/341 (48%), Gaps = 11/341 (3%)
Query: 112 NRCGDAGNLGYRYYMWASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKE--KP 169
NR DA +L + K P+ V Y A+I SL K ++ + +E+ ++ +P
Sbjct: 169 NRVSDAVSLVDKMVEIGYK-PDIV----AYNAIIDSLCKTKRVNDAFDFFKEIERKGIRP 223
Query: 170 QLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAA 229
++T + L+ ++ A +L +M K P+ + LLDA KN V EA
Sbjct: 224 NVVT---YTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 230 KLFDEM-RERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGY 288
+LF+EM R P + ++SL+ G C ++ EA + M G D+V YN L++G+
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 289 AQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADV 348
+ ++ D +L +EM ++G N +Y LIQ + +++A F +M+ G D+
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDI 400
Query: 349 VTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGE 408
TY L+ G C + ++++ I + M +R + + +TY ++ K ++EE L
Sbjct: 401 WTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 409 MRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASL 449
+ G PD+ Y ++ C G L E ++ +M+ L
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/390 (28%), Positives = 192/390 (49%), Gaps = 12/390 (3%)
Query: 131 QPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMV 190
QP+ V Y A+I L K + L+ +M K K + ++ ++ R V
Sbjct: 202 QPDLV----TYGAVINGLCKRGEPDLALNLLNKMEKGKIE-ADVVIYSTVIDSLCKYRHV 256
Query: 191 KKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSL 249
A+ + EM G PD F + L+ LC +A++L +M ER P++ F SL
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316
Query: 250 LYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGC 309
+ + KEGKL+EA+ + +M +P+IV YN+L++G+ ++ +A ++ M K C
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376
Query: 310 DPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYE 369
P+ +Y LI C+ +K+ + F +M R G + VTYTTLI GF ++ D
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436
Query: 370 ILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLAC 429
+ M+ G+ PN +TY ++ K +LE+ + + ++K PD+ YN++ C
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496
Query: 430 KLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQ 489
K G++++ +++ + + P ++ M+ GF +G EA F +M G L P
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL--PD 554
Query: 490 YGTLKALLNSLLR----AQKVEMAKDVWSC 515
GT L+ + LR A E+ K++ SC
Sbjct: 555 SGTYNTLIRAHLRDGDKAASAELIKEMRSC 584
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 202/429 (47%), Gaps = 12/429 (2%)
Query: 136 HSYDVYRALIKSLSKMRKFGAVWALMEEMRK--EKPQLITTEVFVILMRRFASARMVKKA 193
H+ Y +I L + + A++ +M K P ++T L+ F + +A
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNS---LLNGFCHGNRISEA 154
Query: 194 IEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERF-KPSLRHFTSLLYG 252
+ ++D+M + G +PD F L+ L +++ EA L + M + +P L + +++ G
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 253 WCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPN 312
CK G+ A +L +M+ E D+V+Y+ ++ + + DA L EM KG P+
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 313 ANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILD 372
+Y+ LI LC + +A+R +M +VVT+ +LI F K K+ ++ D
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 373 SMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLG 432
MIQR I PN +TY ++ + L+E ++ M C+PDV YN +I CK
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394
Query: 433 ELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGT 492
++ + + ++ +M L T ++ ++HGF A FK+MV G+ P T
Sbjct: 395 KVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV--HPNIMT 452
Query: 493 LKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEA----CSYC 548
LL+ L + K+E A V+ + E ++Y + I + G V++ CS
Sbjct: 453 YNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLS 512
Query: 549 LDMMDADVM 557
L + DV+
Sbjct: 513 LKGVKPDVI 521
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 211/461 (45%), Gaps = 5/461 (1%)
Query: 137 SYDVYRALIKSLSKMR-KFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIE 195
SYD YR + + + K L EM K +P E F L+ A + I
Sbjct: 28 SYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVE-FSKLLSAIAKMKKFDLVIS 86
Query: 196 VLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RERFKPSLRHFTSLLYGWC 254
++M G + + + +++ LC+ S + A + +M + + PS+ SLL G+C
Sbjct: 87 FGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFC 146
Query: 255 KEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNAN 314
++ EA ++ QM + G++PD V + L+ G Q K ++A L++ M KGC P+
Sbjct: 147 HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 206
Query: 315 SYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSM 374
+Y +I LC+ + + A +ME+ EADVV Y+T+I CK R +D + M
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 375 IQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGEL 434
+GI P+ TY ++ + L+ +M + P+V +N +I K G+L
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 435 KEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLK 494
EA +++EM S+ P ++ +++GF L EA + F MV + L P T
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL--PDVVTYN 384
Query: 495 ALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDA 554
L+N +A+KV +++ + +G N +T IH F A M+
Sbjct: 385 TLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD 444
Query: 555 DVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRKMAAERQI 595
V P T+ L+ GL K + A + E ++K E I
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 170/372 (45%), Gaps = 45/372 (12%)
Query: 140 VYRALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASARMVKKAIEVL 197
+Y +I SL K R L EM + +P + T + + + A +L
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW---SDASRLL 298
Query: 198 DEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKE 256
+M + P+ F L+DA K + EA KLFDEM +R P++ + SL+ G+C
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 257 GKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKG-------- 308
+L EA+ + M PD+V YN L++G+ + K+ D EL ++M R+G
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 309 ------------CD---------------PNANSYTVLIQALCRMEKMEEANRAFVEMER 341
CD PN +Y L+ LC+ K+E+A F +++
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 342 SGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEE 401
S E D+ TY + G CK+ K++ +++ S+ +G+ P+ + Y ++ KK EE
Sbjct: 479 SKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
Query: 402 CVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVV--- 458
L +M++ G +PD YN +IR + G+ + + EM + + ++ +
Sbjct: 539 AYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 598
Query: 459 MVH-GFLGQGCL 469
M+H G L +G L
Sbjct: 599 MLHDGRLDKGFL 610
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 213/421 (50%), Gaps = 6/421 (1%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKEK-PQLITTEVFVILMRRFASARMVKKAIEVLDE 199
+ L+ ++SKM+K+ V L E+M+ P + T IL+ F + A+ L +
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCT--CNILLNCFCRCSQLSLALSFLGK 141
Query: 200 MPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEGK 258
M K G EP FG LL+ C+ V +A +FD+M +KP++ + +++ G CK +
Sbjct: 142 MIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 259 LVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTV 318
+ A +L +M+ G PD+V YN+L+SG G+ +DA ++ M ++ P+ ++
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 319 LIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRG 378
LI A + ++ EA + EM R + D+VTY+ LI G C ++D E+ M+ +G
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 379 ILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAV 438
P+ +TY ++ + K +++E ++L EM + G V + Y ++I+ C+ G+L A
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 439 NVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLN 498
++ M + P ++ V++HG G + +A +M G+ T ++
Sbjct: 382 EIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM--DADIVTYNIIIR 439
Query: 499 SLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMP 558
+ +A +V A D++ + +G +++ +T + L+ G +EA + M + ++P
Sbjct: 440 GMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Query: 559 Q 559
Sbjct: 500 N 500
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 207/450 (46%), Gaps = 7/450 (1%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEM 200
YR ++++ + K L M + +P L + F L+ + + I + ++M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQM 107
Query: 201 PKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RERFKPSLRHFTSLLYGWCKEGKL 259
G + LL+ C+ S + A +M + +PS+ F SLL G+C+ ++
Sbjct: 108 QMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRV 167
Query: 260 VEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVL 319
+A Y+ QM G++P++V+YN ++ G + ++ +A +LL M + G P+ +Y L
Sbjct: 168 YDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 320 IQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGI 379
I LC + +A R M + DV T+ LI K ++ E + MI+R +
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 380 LPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVN 439
P+ +TY ++ L+E E+ G M GC PDV Y+++I CK +++ +
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMK 347
Query: 440 VWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNS 499
++ EM + T ++ +++ G+ G L A E F+ MV G+ P T LL+
Sbjct: 348 LFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGV--HPNIITYNVLLHG 405
Query: 500 LLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQ 559
L K+E A + + + G + ++ + I I + G V +A + +MP
Sbjct: 406 LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Query: 560 PDTFAKLMRGLKKLYNRQIAAEITEKVRKM 589
T+ +M G LY + + E RKM
Sbjct: 466 IWTYTTMMLG---LYKKGLRREADALFRKM 492
Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/426 (26%), Positives = 184/426 (43%), Gaps = 58/426 (13%)
Query: 80 ILKKFHSRLPKLELALQHSGVVLRPGLTERVI------------NRCGDAGNLGYRYYMW 127
IL R +L LAL G +++ G ++ +R DA + + +
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYM-FDQMVG 179
Query: 128 ASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEK--PQLITTEVFVILMRRFA 185
+PN V +Y +I L K ++ L+ M K+ P ++T + L+
Sbjct: 180 MGYKPNVV----IYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT---YNSLISGLC 232
Query: 186 SARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RERFKPSLR 244
S+ A ++ M K PD F F L+DA K V EA + ++EM R P +
Sbjct: 233 SSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIV 292
Query: 245 HFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEM 304
++ L+YG C +L EA+ + M G PD+V Y+ L++GY + K+ +L EM
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 305 RRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKI 364
++G N +YT+LIQ CR K+ A F M G +++TY L+ G C + KI
Sbjct: 353 SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412
Query: 365 DRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVV 424
++ IL +M+K G D+ YN++
Sbjct: 413 EKALVIL-----------------------------------ADMQKNGMDADIVTYNII 437
Query: 425 IRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGL 484
IR CK GE+ +A +++ + L P ++ M+ G +G EA F++M G+
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
Query: 485 LSAPQY 490
L Y
Sbjct: 498 LPNECY 503
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 119/271 (43%), Gaps = 5/271 (1%)
Query: 312 NANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEIL 371
N + Y +++ R K++++ F M + + ++ L+S K +K D +
Sbjct: 45 NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104
Query: 372 DSMIQRGILPNQLTYLHIML-AHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACK 430
+ M GI P+ L +I+L + +L + +G+M K+G P + + ++ C+
Sbjct: 105 EQMQMLGI-PHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCR 163
Query: 431 LGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQY 490
+ +A+ ++++M P + ++ G + A + M G+ P
Sbjct: 164 GDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI--GPDV 221
Query: 491 GTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLD 550
T +L++ L + + A + SC+ + +V+ + I + G V EA + +
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 551 MMDADVMPQPDTFAKLMRGLKKLYNRQIAAE 581
M+ + P T++ L+ GL +Y+R AE
Sbjct: 282 MIRRSLDPDIVTYSLLIYGL-CMYSRLDEAE 311
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 225/461 (48%), Gaps = 12/461 (2%)
Query: 131 QPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRK--EKPQLITTEVFVILMRRFASAR 188
+P+ V + LI L + L++ M + KP LIT V
Sbjct: 139 EPDTV----TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALV---NGLCLNG 191
Query: 189 MVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFT 247
V A+ ++D M + G +P+E +G +L +CK+ A +L +M ER K ++
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251
Query: 248 SLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRK 307
++ G CK+G L A + +M+ GF+ DI++Y L+ G+ G+ D +LL++M ++
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311
Query: 308 GCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRC 367
P+ +++ LI + K+ EA EM + G D VTYT+LI GFCK ++D+
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Query: 368 YEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRL 427
+LD M+ +G PN T+ ++ + K +++ +EL +M G V D YN +I+
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431
Query: 428 ACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSA 487
C+LG+L+ A ++ EM + + P S+ +++ G G +A E F+++ +
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM--E 489
Query: 488 PQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSY 547
G +++ + A KV+ A D++ + KG + +V + I I L G + EA
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Query: 548 CLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRK 588
M + P T+ L+R + +A++ E++++
Sbjct: 550 FRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 161/331 (48%), Gaps = 7/331 (2%)
Query: 140 VYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEV--FVILMRRFASARMVKKAIEVL 197
+Y LI+ ++ L+ +M K K IT +V F L+ F +++A E+
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRK---ITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 198 DEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKE 256
EM + G PD + L+D CK + + +A + D M + P++R F L+ G+CK
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 257 GKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSY 316
+ + + +M G D V YN L+ G+ ++GK+ A EL +EM + P+ SY
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 317 TVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQ 376
+L+ LC + E+A F ++E+S E D+ Y +I G C + K+D +++ S+
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 377 RGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKE 436
+G+ P+ TY ++ KK L E L +M + G P+ YN++IR G+ +
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580
Query: 437 AVNVWNEMEAASLSPGTDSFVVMVHGFLGQG 467
+ + E++ S S V MV L G
Sbjct: 581 SAKLIEEIKRCGFSVDA-STVKMVVDMLSDG 610
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/440 (22%), Positives = 197/440 (44%), Gaps = 10/440 (2%)
Query: 160 LMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLD---EMPKYGCEPDEFVFGCLL 216
L +EM + +P+ + R F+ K+ VLD +M G + + ++
Sbjct: 59 LFQEMTRSRPR----PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 217 DALCKNSSVKEAAKLFDEM-RERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFE 275
+ C+ + A ++ + ++P F++L+ G C EG++ EA ++ +M + G +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 276 PDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRA 335
P ++ N L++G GK++DA L+ M G PN +Y +++ +C+ + A
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 336 FVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEK 395
+ME + D V Y+ +I G CK +D + + + M +G + + Y ++
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 396 KEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDS 455
++ +L+ +M K PDV ++ +I K G+L+EA + EM +SP T +
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 456 FVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSC 515
+ ++ GF + L +A MV +G P T L+N +A ++ +++
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKG--CGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 516 IVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYN 575
+ +G + + I G ++ A +M+ V P ++ L+ GL
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 576 RQIAAEITEKVRKMAAERQI 595
+ A EI EK+ K E I
Sbjct: 473 PEKALEIFEKIEKSKMELDI 492
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 158/408 (38%), Gaps = 108/408 (26%)
Query: 284 LLSGYAQMGKMTDAFELLKEMRR-----------------------------------KG 308
L SG + K DA +L +EM R KG
Sbjct: 44 LRSGIVDI-KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKG 102
Query: 309 CDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRK----- 363
N + +++I CR K+ A A ++ + G E D VT++TLI+G C +
Sbjct: 103 IAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEAL 162
Query: 364 --IDRCYE----------------------------ILDSMIQRGILPNQLTYLHIMLAH 393
+DR E ++D M++ G PN++TY ++
Sbjct: 163 ELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVM 222
Query: 394 EKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAAS----- 448
K + +EL+ +M + D Y+++I CK G L A N++NEME
Sbjct: 223 CKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 282
Query: 449 ------------------------------LSPGTDSFVVMVHGFLGQGCLIEACEYFKE 478
++P +F ++ F+ +G L EA E KE
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 479 MVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSN 538
M+ RG+ +P T +L++ + +++ A + +V+KGC N+ + I I+
Sbjct: 343 MIQRGI--SPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKA 400
Query: 539 GHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKV 586
+ + M V+ T+ L++G +L ++A E+ +++
Sbjct: 401 NLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 204/412 (49%), Gaps = 5/412 (1%)
Query: 160 LMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDAL 219
+ + M KE + + IL+ +++A + D+M + GC+P + L+ AL
Sbjct: 252 VFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKAL 311
Query: 220 CKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDI 278
C + +A LFDEM R KP++ +T L+ G C++GK+ EA V +M P +
Sbjct: 312 CDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSV 371
Query: 279 VVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVE 338
+ YN L++GY + G++ AFELL M ++ C PN ++ L++ LCR+ K +A
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431
Query: 339 MERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEE 398
M +G D+V+Y LI G C+ ++ Y++L SM I P+ LT+ I+ A K+ +
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK 491
Query: 399 LEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVV 458
+ +G M + G D +I CK+G+ ++A+ + + + S V
Sbjct: 492 ADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNV 551
Query: 459 MVHGFLGQGCLI-EACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIV 517
++ L +GC + E ++ GL+ P T L++ L+R+ + + + +
Sbjct: 552 ILD-MLSKGCKVKEELAMLGKINKLGLV--PSVVTYTTLVDGLIRSGDITGSFRILELMK 608
Query: 518 TKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRG 569
GC NVY +TI I+ L G V+EA M D+ V P T+ +++G
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 211/440 (47%), Gaps = 8/440 (1%)
Query: 132 PNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVK 191
PN V Y LI L ++ + + L ++M ++ Q +T + +L++ ++
Sbjct: 264 PNSVS----YSILIHGLCEVGRLEEAFGLKDQMGEKGCQ-PSTRTYTVLIKALCDRGLID 318
Query: 192 KAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RERFKPSLRHFTSLL 250
KA + DEM GC+P+ + L+D LC++ ++EA + +M ++R PS+ + +L+
Sbjct: 319 KAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALI 378
Query: 251 YGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCD 310
G+CK+G++V A +L M+ +P++ +N L+ G ++GK A LLK M G
Sbjct: 379 NGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438
Query: 311 PNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEI 370
P+ SY VLI LCR M A + M E D +T+T +I+ FCK K D
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498
Query: 371 LDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACK 430
L M+++GI +++T ++ K + + + ++ + K+ + + NV++ + K
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSK 558
Query: 431 LGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQY 490
++KE + + ++ L P ++ +V G + G + + + M G L P
Sbjct: 559 GCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCL--PNV 616
Query: 491 GTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLD 550
++N L + +VE A+ + S + G N +T+ + +NG + A
Sbjct: 617 YPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRA 676
Query: 551 MMDADVMPQPDTFAKLMRGL 570
M++ ++ L++G
Sbjct: 677 MVERGYELNDRIYSSLLQGF 696
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/502 (26%), Positives = 229/502 (45%), Gaps = 41/502 (8%)
Query: 102 LRPGLTERVINRCGDAGNLGYRYYMWASKQPNY-------------VHSYDVYR------ 142
+ P + +VI+ ++ R++MW K +Y + S +YR
Sbjct: 67 MNPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVI 126
Query: 143 -ALIKSLSKMRKFGAVWALM---EEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLD 198
ALIK S+ K + LM +E+R+ + + L+ A + A
Sbjct: 127 VALIKECSRCEK--EMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYR 184
Query: 199 EMPKYGCEPDEFVFG-----CLLDALCKNSSVKEAAKLFDE--MRERFKPSLRHFTSLLY 251
M E D FV G +++ALCKN EAA++F ++ F TSLL
Sbjct: 185 RM-----EADGFVVGMIDYRTIVNALCKNGYT-EAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 252 GWCKEGKLVEAKYVL-VQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCD 310
G+C+ L +A V V K+ P+ V Y+ L+ G ++G++ +AF L +M KGC
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ 298
Query: 311 PNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEI 370
P+ +YTVLI+ALC +++A F EM GC+ +V TYT LI G C+ KI+ +
Sbjct: 299 PSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 371 LDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACK 430
M++ I P+ +TY ++ + K + EL+ M K C P+V +N ++ C+
Sbjct: 359 CRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR 418
Query: 431 LGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQY 490
+G+ +AV++ M LSP S+ V++ G +G + A + M + P
Sbjct: 419 VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI--EPDC 476
Query: 491 GTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLD 550
T A++N+ + K ++A ++ KG L+ T I + G ++A
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET 536
Query: 551 MMDADVMPQPDTFAKLMRGLKK 572
++ ++ P + ++ L K
Sbjct: 537 LVKMRILTTPHSLNVILDMLSK 558
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 6/226 (2%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKEKPQL--ITTEVFVILMRRFASARMVKKAIEVLD 198
+ A+I + K K A + M ++ L +T + + + R A+ +L+
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR---DALFILE 535
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEG 257
+ K +LD L K VKE + ++ + PS+ +T+L+ G + G
Sbjct: 536 TLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYT 317
+ + +L MK +G P++ Y +++G Q G++ +A +LL M+ G PN +YT
Sbjct: 596 DITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYT 655
Query: 318 VLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRK 363
V+++ K++ A M G E + Y++L+ GF S+K
Sbjct: 656 VMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQK 701
>sp|Q9M8W9|PP211_ARATH Pentatricopeptide repeat-containing protein At3g04130,
mitochondrial OS=Arabidopsis thaliana GN=At3g04130 PE=2
SV=2
Length = 508
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 203/422 (48%), Gaps = 19/422 (4%)
Query: 100 VVLRPGLTERVINRCGDAGNLGYRYYMWASKQPNYVHSYDVYRALIKSLSKMRKFGAVWA 159
V L GL ++++R D WA + HS D Y + L K +K+ +
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 160 LMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDAL 219
+E MR +K L+T +MRRFA A ++A+ + D + ++G E + LLD L
Sbjct: 143 FVERMRGDK--LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTL 200
Query: 220 CKNSSVKEAAKLFDEMRERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIV 279
CK V++A + +++ P+ F ++GWCK ++ EA + + +MK GF P ++
Sbjct: 201 CKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVI 260
Query: 280 VYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEM 339
Y ++ Y Q + +E+L EM G PN+ +YT ++ +L ++ EEA R M
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 320
Query: 340 ERSGCEADVVTYTTLISGFCKSRKIDRCYEILD-SMIQRGILPNQLTYLHIMLAHEKKEE 398
+RSGC+ D + Y LI ++ +++ + M + G+ N TY ++ + +E
Sbjct: 321 KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 380
Query: 399 LEECVELMGEMRKIG-CVPDVSNYNVVIRLACKLGELKEAVNVWNEM---EAASLSPGTD 454
++ +EL+ EM C PDV Y ++R K G++ E + EM SL T
Sbjct: 381 EDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTY 440
Query: 455 SFVVMVHGFLGQGCLIEACEY----FKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAK 510
+F++ + C CE+ F+EM+ + + P++ T LL + + E A+
Sbjct: 441 TFLIQ------RLCRANMCEWAYCLFEEMISQDI--TPRHRTCLLLLEEVKKKNMHESAE 492
Query: 511 DV 512
+
Sbjct: 493 RI 494
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 132/286 (46%), Gaps = 14/286 (4%)
Query: 132 PNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASARM 189
PN H+++++ I K + ++EM+ +P +I+ + ++R +
Sbjct: 222 PN-AHTFNIF---IHGWCKANRVEEALWTIQEMKGHGFRPCVIS---YTTIIRCYCQQFE 274
Query: 190 VKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RERFKPSLRHFTS 248
K E+L EM G P+ + ++ +L +EA ++ M R KP +
Sbjct: 275 FIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNC 334
Query: 249 LLYGWCKEGKLVEAKYVL-VQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRK 307
L++ + G+L EA+ V V+M + G + YN++++ Y + A ELLKEM
Sbjct: 335 LIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESS 394
Query: 308 G-CDPNANSYTVLIQALCRMEKMEEANRAFVEM-ERSGCEADVVTYTTLISGFCKSRKID 365
C+P+ ++Y L+++ + + E + EM + D TYT LI C++ +
Sbjct: 395 NLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCE 454
Query: 366 RCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRK 411
Y + + MI + I P T L ++L KK+ + E E + + K
Sbjct: 455 WAYCLFEEMISQDITPRHRTCL-LLLEEVKKKNMHESAERIEHIMK 499
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 8/240 (3%)
Query: 307 KGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDR 366
KG ++++Y + + L + +K + + FVE R + T ++ F + + +
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRM-KEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEE 173
Query: 367 CYEILDSMIQRGILPN--QLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVV 424
I D + + G+ N + L L EK+ E V L K P+ +N+
Sbjct: 174 AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ---LKSHITPNAHTFNIF 230
Query: 425 IRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGL 484
I CK ++EA+ EM+ P S+ ++ + Q I+ E EM G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG- 289
Query: 485 LSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEA 544
S P T +++SL ++ E A V + + GC+ + + IH+L G ++EA
Sbjct: 290 -SPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEA 348
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 220/481 (45%), Gaps = 10/481 (2%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASARMVKKAIEVLD 198
+ L+ +++KM KF V +L E+M+ L T +F+ F + A+ +L
Sbjct: 78 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI---NYFCRRSQLSLALAILG 134
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEG 257
+M K G P LL+ C + + EA L D+M E ++P FT+L++G +
Sbjct: 135 KMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHN 194
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYT 317
K EA ++ +M G +PD+V Y +++G + G+ A LL +M + + + Y
Sbjct: 195 KASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYN 254
Query: 318 VLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQR 377
+I LC+ + M++A F +ME G + DV TY LIS C + +L M+++
Sbjct: 255 TIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK 314
Query: 378 GILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIG-CVPDVSNYNVVIRLACKLGELKE 436
I P+ + + ++ A K+ +L E +L EM K C PDV YN +I+ CK ++E
Sbjct: 315 NINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEE 374
Query: 437 AVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKAL 496
+ V+ EM L T ++ ++HGF A FK+MV G+ P T L
Sbjct: 375 GMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV--HPDIMTYNIL 432
Query: 497 LNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADV 556
L+ L VE A V+ + + +L++ +T I +L G V++ + V
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 557 MPQPDTFAKLMRGL-KKLYNRQIAAEITEKVRKMAAERQITFKMYKRRGERDLKEKAKKQ 615
P T+ +M G +K + A E T+ R RD E A +
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552
Query: 616 V 616
+
Sbjct: 553 L 553
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 185/410 (45%), Gaps = 2/410 (0%)
Query: 180 LMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRE-R 238
L R+ + AI + +M K P F LL A+ K + L ++M+
Sbjct: 46 LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 105
Query: 239 FKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAF 298
+L ++ + +C+ +L A +L +M G+ P IV N+LL+G+ ++++A
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 165
Query: 299 ELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGF 358
L+ +M G P+ ++T L+ L + K EA M GC+ D+VTY +I+G
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225
Query: 359 CKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDV 418
CK + D +L+ M + I + + Y I+ K + +++ +L +M G PDV
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 285
Query: 419 SNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKE 478
YN +I C G +A + ++M +++P F ++ F+ +G L+EA + + E
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE 345
Query: 479 MVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSN 538
MV + P L+ + ++VE +V+ + +G N +T IH F
Sbjct: 346 MV-KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 539 GHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRK 588
A M+ V P T+ L+ GL N + A + E ++K
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQK 454
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 169/363 (46%), Gaps = 42/363 (11%)
Query: 131 QPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMV 190
QP+ V Y A+I L K + L+ +M K K + ++ ++ + +
Sbjct: 212 QPDLV----TYGAVINGLCKRGEPDLALNLLNKMEKGKIE-ADVVIYNTIIDGLCKYKHM 266
Query: 191 KKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSL 249
A ++ ++M G +PD F + L+ LC +A++L +M E+ P L F +L
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326
Query: 250 LYGWCKEGKLVEAKYVLVQM-KDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKG 308
+ + KEGKLVEA+ + +M K PD+V YN L+ G+ + ++ + E+ +EM ++G
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386
Query: 309 --------------------CD---------------PNANSYTVLIQALCRMEKMEEAN 333
CD P+ +Y +L+ LC +E A
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETAL 446
Query: 334 RAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAH 393
F M++ + D+VTYTT+I CK+ K++ +++ S+ +G+ PN +TY +M
Sbjct: 447 VVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGF 506
Query: 394 EKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGT 453
+K EE L EM++ G +P+ YN +IR + G+ + + EM + +
Sbjct: 507 CRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDA 566
Query: 454 DSF 456
+F
Sbjct: 567 STF 569
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 140/291 (48%), Gaps = 7/291 (2%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEM--RKEKPQLITTEVFVILMRRFASARMVKKAIEVLD 198
Y LI L ++ L+ +M + P L+ F L+ F + +A ++ D
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLV---FFNALIDAFVKEGKLVEAEKLYD 344
Query: 199 EMPKYG-CEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKE 256
EM K C PD + L+ CK V+E ++F EM +R + +T+L++G+ +
Sbjct: 345 EMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQA 404
Query: 257 GKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSY 316
A+ V QM G PDI+ YN LL G G + A + + M+++ + +Y
Sbjct: 405 RDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTY 464
Query: 317 TVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQ 376
T +I+ALC+ K+E+ F + G + +VVTYTT++SGFC+ + + M +
Sbjct: 465 TTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Query: 377 RGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRL 427
G LPN TY ++ A + + EL+ EMR G D S + +V +
Sbjct: 525 DGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNM 575
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 84/200 (42%), Gaps = 2/200 (1%)
Query: 398 ELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFV 457
+L++ + L G+M K P + ++ ++ K+ + +++ +M+ +S ++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 458 VMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIV 517
+ ++ F + L A +M+ G P TL +LLN ++ A + +V
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGY--GPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 518 TKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQ 577
G + + +T +H LF + EA + M+ P T+ ++ GL K
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 232
Query: 578 IAAEITEKVRKMAAERQITF 597
+A + K+ K E +
Sbjct: 233 LALNLLNKMEKGKIEADVVI 252
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 176 bits (446), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 205/467 (43%), Gaps = 41/467 (8%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKEK-PQLITTEVFVILMRRFASARMVKKAIEVLDE 199
+ L+ +++KM KF V +L E+M+ P + IL+ F + A+ VL +
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPH--NHYTYSILINCFCRRSQLPLALAVLGK 141
Query: 200 MPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RERFKPSLRHFTSLLY------- 251
M K G EP+ LL+ C + + EA L D+M ++P+ F +L++
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 252 ----------------------------GWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNN 283
G CK G A +L +M+ EP +++YN
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 284 LLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSG 343
++ G + M DA L KEM KG PN +Y+ LI LC + +A+R +M
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 344 CEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECV 403
DV T++ LI F K K+ ++ D M++R I P+ +TY ++ + L+E
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 404 ELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGF 463
++ M C PDV YN +I+ CK ++E + V+ EM L T ++ +++ G
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGL 441
Query: 464 LGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCEL 523
G A E FKEMV G+ P T LL+ L + K+E A V+ + E
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGV--PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 524 NVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGL 570
+Y + I I + G V++ ++ V P + ++ G
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGF 546
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 191/392 (48%), Gaps = 16/392 (4%)
Query: 131 QPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEK--PQLITTEVFVILMRRFASAR 188
QP+ V Y ++ L K + L+ +M + K P ++ ++ ++ +
Sbjct: 218 QPDLV----TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL---IYNTIIDGLCKYK 270
Query: 189 MVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFT 247
+ A+ + EM G P+ + L+ LC +A++L +M ER P + F+
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFS 330
Query: 248 SLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRK 307
+L+ + KEGKLVEA+ + +M +P IV Y++L++G+ ++ +A ++ + M K
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Query: 308 GCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRC 367
C P+ +Y LI+ C+ +++EE F EM + G + VTY LI G ++ D
Sbjct: 391 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 368 YEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRL 427
EI M+ G+ PN +TY ++ K +LE+ + + +++ P + YN++I
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 510
Query: 428 ACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSA 487
CK G++++ +++ + + P ++ M+ GF +G EA FKEM G L
Sbjct: 511 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL-- 568
Query: 488 PQYGTLKALLNSLL----RAQKVEMAKDVWSC 515
P G L+ + L R E+ K++ SC
Sbjct: 569 PNSGCYNTLIRARLRDGDREASAELIKEMRSC 600
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 189/404 (46%), Gaps = 3/404 (0%)
Query: 180 LMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERF 239
L R S + A+ + EM K P F LL A+ K + L ++M+
Sbjct: 52 LSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 111
Query: 240 KPSLRHFTSLLYG-WCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAF 298
P + S+L +C+ +L A VL +M G+EP+IV ++LL+GY ++++A
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171
Query: 299 ELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGF 358
L+ +M G PN ++ LI L K EA M GC+ D+VTY +++G
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231
Query: 359 CKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDV 418
CK D + +L+ M Q + P L Y I+ K + +++ + L EM G P+V
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291
Query: 419 SNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKE 478
Y+ +I C G +A + ++M ++P +F ++ F+ +G L+EA + + E
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 479 MVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSN 538
MV R + P T +L+N +++ AK ++ +V+K C +V + I
Sbjct: 352 MVKRSI--DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 409
Query: 539 GHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEI 582
V+E +M ++ T+ L++GL + + +A EI
Sbjct: 410 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 169/366 (46%), Gaps = 42/366 (11%)
Query: 140 VYRALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASARMVKKAIEVL 197
+Y +I L K + L +EM + +P ++T + + + A +L
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW---SDASRLL 314
Query: 198 DEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKE 256
+M + PD F F L+DA K + EA KL+DEM +R PS+ ++SL+ G+C
Sbjct: 315 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 374
Query: 257 GKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKG-------- 308
+L EAK + M PD+V YN L+ G+ + ++ + E+ +EM ++G
Sbjct: 375 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 309 ------------CD---------------PNANSYTVLIQALCRMEKMEEANRAFVEMER 341
CD PN +Y L+ LC+ K+E+A F ++R
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 342 SGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEE 401
S E + TY +I G CK+ K++ +++ ++ +G+ P+ + Y ++ +K EE
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 402 CVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVH 461
L EM++ G +P+ YN +IR + G+ + + + EM + + G S + +V
Sbjct: 555 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFA-GDASTIGLVT 613
Query: 462 GFLGQG 467
L G
Sbjct: 614 NMLHDG 619
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/191 (19%), Positives = 83/191 (43%), Gaps = 2/191 (1%)
Query: 398 ELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFV 457
+L++ V L GEM K P + ++ ++ K+ + +++ +M+ + ++
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 458 VMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIV 517
++++ F + L A +M+ G P TL +LLN ++++ A + +
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGY--EPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 518 TKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQ 577
G + N + IH LF + EA + M+ P T+ ++ GL K +
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 578 IAAEITEKVRK 588
+A + K+ +
Sbjct: 239 LAFNLLNKMEQ 249
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 176 bits (446), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 129/506 (25%), Positives = 227/506 (44%), Gaps = 18/506 (3%)
Query: 135 VHSYDVYRALIKSLSKMRKFGAVWALMEEMRK--EKPQLITTEVFVILMRRFASARMVKK 192
VH Y LI + + AL+ +M K +P ++T L+ + + +
Sbjct: 117 VHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS---LLNGYCHGKRISD 173
Query: 193 AIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERF-KPSLRHFTSLLY 251
A+ ++D+M + G PD F L+ L ++ EA L D M +R +P+L + ++
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 252 GWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDP 311
G CK G A +L +M+ A E D+V++N ++ + + DA L KEM KG P
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 293
Query: 312 NANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEIL 371
N +Y+ LI LC + +A++ +M ++VT+ LI F K K ++
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 372 DSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKL 431
D MI+R I P+ TY ++ + L++ ++ M C PDV YN +I+ CK
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 432 GELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYG 491
+++ ++ EM L T ++ ++ G G A + FK+MV G+ P
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV--PPDIM 471
Query: 492 TLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDM 551
T LL+ L K+E A +V+ + +L++Y +T I + G V + +
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 552 MDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRKMAAERQI----TFKMYKRRGERD 607
V P T+ ++ G L ++++ E ++KM + + T+ R RD
Sbjct: 532 SLKGVKPNVVTYNTMISG---LCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRD 588
Query: 608 LKEKAKKQVDGRKRRARQRRWGGGRS 633
+ A ++ R R R+ G S
Sbjct: 589 GDKAASAEL---IREMRSCRFVGDAS 611
Score = 159 bits (403), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 180/390 (46%), Gaps = 12/390 (3%)
Query: 131 QPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMV 190
QPN V Y ++ L K L+ +M K + +F ++ R V
Sbjct: 222 QPNLV----TYGVVVNGLCKRGDTDLALNLLNKMEAAKIE-ADVVIFNTIIDSLCKYRHV 276
Query: 191 KKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSL 249
A+ + EM G P+ + L+ LC +A++L +M E+ P+L F +L
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 250 LYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGC 309
+ + KEGK VEA+ + M +PDI YN+L++G+ ++ A ++ + M K C
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 310 DPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYE 369
P+ +Y LI+ C+ +++E+ F EM G D VTYTTLI G D +
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 370 ILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLAC 429
+ M+ G+ P+ +TY ++ +LE+ +E+ M+K D+ Y +I C
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516
Query: 430 KLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQ 489
K G++ + +++ + + P ++ M+ G + L EA K+M G L P
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL--PN 574
Query: 490 YGTLKALLNSLLR----AQKVEMAKDVWSC 515
GT L+ + LR A E+ +++ SC
Sbjct: 575 SGTYNTLIRAHLRDGDKAASAELIREMRSC 604
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 208/449 (46%), Gaps = 4/449 (0%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEM 200
YR ++++ K L M K +P E F L+ A + I + ++M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVE-FNKLLSAIAKMKKFDVVISLGEKM 111
Query: 201 PKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RERFKPSLRHFTSLLYGWCKEGKL 259
+ + + L++ C+ S + A L +M + ++PS+ +SLL G+C ++
Sbjct: 112 QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 260 VEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVL 319
+A ++ QM + G+ PD + + L+ G K ++A L+ M ++GC PN +Y V+
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 320 IQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGI 379
+ LC+ + A +ME + EADVV + T+I CK R +D + M +GI
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI 291
Query: 380 LPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVN 439
PN +TY ++ + +L+ +M + P++ +N +I K G+ EA
Sbjct: 292 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 351
Query: 440 VWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNS 499
++++M S+ P ++ +V+GF L +A + F+ MV + P T L+
Sbjct: 352 LYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF--PDVVTYNTLIKG 409
Query: 500 LLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQ 559
++++VE +++ + +G + +T I LF +G A M+ V P
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 560 PDTFAKLMRGLKKLYNRQIAAEITEKVRK 588
T++ L+ GL + A E+ + ++K
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 138/297 (46%), Gaps = 10/297 (3%)
Query: 131 QPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEM--RKEKPQLITTEVFVILMRRFASAR 188
PN V + ALI + K KF L ++M R P + T + L+ F
Sbjct: 327 NPNLV----TFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT---YNSLVNGFCMHD 379
Query: 189 MVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFT 247
+ KA ++ + M C PD + L+ CK+ V++ +LF EM R +T
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 248 SLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRK 307
+L+ G +G A+ V QM G PDI+ Y+ LL G GK+ A E+ M++
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 308 GCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRC 367
+ YT +I+ +C+ K+++ F + G + +VVTY T+ISG C R +
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Query: 368 YEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVV 424
Y +L M + G LPN TY ++ AH + + EL+ EMR V D S +V
Sbjct: 560 YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 85/200 (42%), Gaps = 2/200 (1%)
Query: 398 ELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFV 457
+L++ + L G M K +P + +N ++ K+ + +++ +M+ + G ++
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 458 VMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIV 517
++++ F + + A +M+ G P TL +LLN +++ A + +V
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGY--EPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 518 TKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQ 577
G + +T IH LF + EA + M+ P T+ ++ GL K +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 578 IAAEITEKVRKMAAERQITF 597
+A + K+ E +
Sbjct: 243 LALNLLNKMEAAKIEADVVI 262
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 196/416 (47%), Gaps = 38/416 (9%)
Query: 193 AIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRE-RFKPSLRHFTSLLY 251
A VL K G EPD F L++ C V EA L D M E + +P L ++L+
Sbjct: 124 AFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLIN 183
Query: 252 GWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDP 311
G C +G++ EA ++ +M + GF+PD V Y +L+ + G A +L ++M +
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 312 NANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEIL 371
+ Y+++I +LC+ ++A F EME G +ADVVTY++LI G C K D ++L
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 372 DSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEM--RKI----------------- 412
MI R I+P+ +T+ ++ K+ +L E EL EM R I
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Query: 413 ----------------GCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSF 456
GC PD+ Y+++I CK + + + ++ E+ + L P T ++
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 457 VVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCI 516
+V GF G L A E F+EMV RG+ P T LL+ L ++ A +++ +
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGV--PPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Query: 517 VTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKK 572
L + + I IH + + V +A S + D V P T+ ++ GL K
Sbjct: 482 QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK 537
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 211/458 (46%), Gaps = 55/458 (12%)
Query: 115 GDAGNLGYRYYMWASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEM--RKEKPQLI 172
G A LGY +P+ + + L+ + AL++ M K++P L+
Sbjct: 129 GRAWKLGY--------EPDTI----TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 176
Query: 173 TTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLL---------------- 216
T L+ V +A+ ++D M +YG +PDE +G +L
Sbjct: 177 TVST---LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 217 -------------------DALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKE 256
D+LCK+ S +A LF+EM + K + ++SL+ G C +
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 257 GKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSY 316
GK + +L +M PD+V ++ L+ + + GK+ +A EL EM +G P+ +Y
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 317 TVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQ 376
LI C+ + EAN+ F M GCE D+VTY+ LI+ +CK++++D + +
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 377 RGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKE 436
+G++PN +TY ++L + +L EL EM G P V Y +++ C GEL +
Sbjct: 414 KGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNK 473
Query: 437 AVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKAL 496
A+ ++ +M+ + ++ G + +++HG + +A F + +G+ P T +
Sbjct: 474 ALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV--KPDVVTYNVM 531
Query: 497 LNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHS 534
+ L + + A ++ + GC + + + I I +
Sbjct: 532 IGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 178/370 (48%), Gaps = 38/370 (10%)
Query: 148 LSKMRKFGAVWALMEEMRKEKPQLITTEV--FVILMRRFASARMVKKAIEVLDEMPKYGC 205
L+++ K G ++ RK + + I V + I++ A+ + +EM G
Sbjct: 217 LNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI 276
Query: 206 EPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEGKLVEAKY 264
+ D + L+ LC + + AK+ EM R P + F++L+ + KEGKL+EAK
Sbjct: 277 KADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE 336
Query: 265 VLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALC 324
+ +M G PD + YN+L+ G+ + + +A ++ M KGC+P+ +Y++LI + C
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 325 RMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQL 384
+ +++++ R F E+ G + +TY TL+ GFC+S K++ E+ M+ RG+ P+ +
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 456
Query: 385 TYLHIMLAHEKKEELEECVELMGEMRKI-------------------------------- 412
TY ++ EL + +E+ +M+K
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL 516
Query: 413 ---GCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCL 469
G PDV YNV+I CK G L EA ++ +M+ +P ++ +++ LG L
Sbjct: 517 SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGL 576
Query: 470 IEACEYFKEM 479
I + E +EM
Sbjct: 577 ISSVELIEEM 586
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 160/323 (49%), Gaps = 6/323 (1%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEM--RKEKPQLITTEVFVILMRRFASARMVKKAIEVLD 198
Y +LI L K+ ++ EM R P ++T F L+ F + +A E+ +
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVT---FSALIDVFVKEGKLLEAKELYN 339
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEG 257
EM G PD + L+D CK + + EA ++FD M + +P + ++ L+ +CK
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYT 317
++ + + ++ G P+ + YN L+ G+ Q GK+ A EL +EM +G P+ +Y
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 318 VLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQR 377
+L+ LC ++ +A F +M++S + Y +I G C + K+D + + S+ +
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 378 GILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEA 437
G+ P+ +TY ++ KK L E L +M++ GC PD YN++IR L +
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISS 579
Query: 438 VNVWNEMEAASLSPGTDSFVVMV 460
V + EM+ S + + +++
Sbjct: 580 VELIEEMKVCGFSADSSTIKMVI 602
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 170/377 (45%), Gaps = 37/377 (9%)
Query: 247 TSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRR 306
T ++ +C++ KL+ A VL + G+EPD + ++ L++G+ G++++A L+ M
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 307 KGCDPNANSYTVLIQALCRMEKMEEA-----------------------NR--------- 334
P+ + + LI LC ++ EA NR
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 335 ---AFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIML 391
F +ME +A VV Y+ +I CK D + + M +GI + +TY ++
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIG 288
Query: 392 AHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSP 451
+ ++ +++ EM +PDV ++ +I + K G+L EA ++NEM ++P
Sbjct: 289 GLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAP 348
Query: 452 GTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKD 511
T ++ ++ GF + CL EA + F MV +G P T L+NS +A++V+
Sbjct: 349 DTITYNSLIDGFCKENCLHEANQMFDLMVSKG--CEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 512 VWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLK 571
++ I +KG N + + +G + A +M+ V P T+ L+ GL
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 572 KLYNRQIAAEITEKVRK 588
A EI EK++K
Sbjct: 467 DNGELNKALEIFEKMQK 483
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 167/394 (42%), Gaps = 62/394 (15%)
Query: 225 VKEAAKLFDEM-RERFKPSLRHFT------------SLLYGWCKEGKLVEAKYVLVQMKD 271
V +A LF+ M + R P+ F L+ G+CK M+
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCK------------GMEL 98
Query: 272 AGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEE 331
G E D+ +++ Y + K+ AF +L + G +P+ +++ L+ C ++ E
Sbjct: 99 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE 158
Query: 332 ANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIML 391
A M D+VT +TLI+G C ++ ++D M++ G P+++TY ++
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 392 AHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEME------ 445
K ++L +M + V Y++VI CK G +A++++NEME
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 446 -----------------------------AASLSPGTDSFVVMVHGFLGQGCLIEACEYF 476
++ P +F ++ F+ +G L+EA E +
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 477 KEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLF 536
EM+ RG+ AP T +L++ + + A ++ +V+KGCE ++ ++I I+S
Sbjct: 339 NEMITRGI--APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 537 SNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGL 570
V + ++ ++P T+ L+ G
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGF 430
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 132 PNYVHSYDVYRALIKSLSKMRKFGAVWALMEEM--RKEKPQLITTEVFVILMRRFASARM 189
PN + Y L+ + K A L +EM R P ++T + IL+
Sbjct: 418 PNTI----TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT---YGILLDGLCDNGE 470
Query: 190 VKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTS 248
+ KA+E+ ++M K ++ ++ +C S V +A LF + ++ KP + +
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 249 LLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKG 308
++ G CK+G L EA + +MK+ G PD YN L+ + + + EL++EM K
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM--KV 588
Query: 309 CDPNANSYTVLIQALCRMEKMEEANRAFVEM 339
C +A+S T I+ + M +++F++M
Sbjct: 589 CGFSADSST--IKMVIDMLSDRRLDKSFLDM 617
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 111/278 (39%), Gaps = 37/278 (13%)
Query: 293 KMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYT 352
K+ DA +L + M + P + L A+ R ++ + ME +G E D+ T T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 353 TLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKI 412
+I+ +C+ +K+ + +L G K+
Sbjct: 110 IMINCYCRKKKLLFAFSVL-----------------------------------GRAWKL 134
Query: 413 GCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEA 472
G PD ++ ++ C G + EAV + + M P + +++G +G + EA
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 473 CEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWI 532
MV G P T +LN L ++ +A D++ + + + +V ++I I
Sbjct: 195 LVLIDRMVEYGF--QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVI 252
Query: 533 HSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGL 570
SL +G +A S +M + T++ L+ GL
Sbjct: 253 DSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 229/474 (48%), Gaps = 10/474 (2%)
Query: 89 PKLELALQHSGVVLRPGLTERVINRCGDAGNLGYRYYMWASKQPNYVHSYDVYRALIKSL 148
P E L +P V+ R D N Y+ W ++ H + Y +L+ +
Sbjct: 50 PSAENTLSALSFKPQPEFVIGVLRRLKDV-NRAIEYFRWYERRTELPHCPESYNSLLLVM 108
Query: 149 SKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCE 206
++ R F A+ ++ EM P + T + ++ A +++ +V+ M K+
Sbjct: 109 ARCRNFDALDQILGEMSVAGFGPSVNTC---IEMVLGCVKANKLREGYDVVQMMRKFKFR 165
Query: 207 PDEFVFGCLLDALCKNSSVKEAAKLFDEMRE-RFKPSLRHFTSLLYGWCKEGKLVEAKYV 265
P + L+ A + LF +M+E ++P++ FT+L+ G+ KEG++ A +
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSL 225
Query: 266 LVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCR 325
L +MK + + DIV+YN + + ++GK+ A++ E+ G P+ +YT +I LC+
Sbjct: 226 LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCK 285
Query: 326 MEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLT 385
+++EA F +E++ Y T+I G+ + K D Y +L+ +G +P+ +
Sbjct: 286 ANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIA 345
Query: 386 YLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEME 445
Y I+ K +++E +++ EM+K P++S YN++I + C+ G+L A + + M+
Sbjct: 346 YNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQ 404
Query: 446 AASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQK 505
A L P + +MV L EAC F+EM + + P T +L++ L + +
Sbjct: 405 KAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYK--VCTPDEITFCSLIDGLGKVGR 462
Query: 506 VEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQ 559
V+ A V+ ++ C N +T I + F++G ++ DM++ + P
Sbjct: 463 VDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPD 516
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 195/403 (48%), Gaps = 4/403 (0%)
Query: 143 ALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEMPK 202
+LI L K+ + + + E+M + + V+ L++ F + + ++ +M
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSDCR-TNSIVYTSLIKNFFNHGRKEDGHKIYKDMIN 510
Query: 203 YGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMR-ERFKPSLRHFTSLLYGWCKEGKLVE 261
C PD + +D + K ++ +F+E++ RF P R ++ L++G K G E
Sbjct: 511 QNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANE 570
Query: 262 AKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQ 321
+ MK+ G D YN ++ G+ + GK+ A++LL+EM+ KG +P +Y +I
Sbjct: 571 TYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVID 630
Query: 322 ALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILP 381
L ++++++EA F E + E +VV Y++LI GF K +ID Y IL+ ++Q+G+ P
Sbjct: 631 GLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690
Query: 382 NQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVW 441
N T+ ++ A K EE+ E + M+++ C P+ Y ++I CK+ + +A W
Sbjct: 691 NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750
Query: 442 NEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLL 501
EM+ + P T S+ M+ G G + EA F G P A++ L
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG--GVPDSACYNAMIEGLS 808
Query: 502 RAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEA 544
+ A ++ +G ++ + + +L N +++A
Sbjct: 809 NGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/530 (21%), Positives = 224/530 (42%), Gaps = 85/530 (16%)
Query: 130 KQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARM 189
++ Y + ++ LI+ +K + + +L++EM+ ++ + + F
Sbjct: 195 QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV-LYNVCIDSFGKVGK 253
Query: 190 VKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RERFKPSLRHFTS 248
V A + E+ G +PDE + ++ LCK + + EA ++F+ + + R P + +
Sbjct: 254 VDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNT 313
Query: 249 LLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDA----------- 297
++ G+ GK EA +L + + G P ++ YN +L+ +MGK+ +A
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA 373
Query: 298 -----------------------FELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANR 334
FEL M++ G PN + +++ LC+ +K++EA
Sbjct: 374 APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACA 433
Query: 335 AFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIM---L 391
F EM+ C D +T+ +LI G K ++D Y++ + M+ N + Y ++
Sbjct: 434 MFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFF 493
Query: 392 AHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSP 451
H +KE+ ++ +M C PD+ N + K GE ++ ++ E++A P
Sbjct: 494 NHGRKEDGH---KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550
Query: 452 GTDSFVVMVHGFLG----------------QGCLIE-------------------ACEYF 476
S+ +++HG + QGC+++ A +
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 477 KEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLF 536
+EM +G P T ++++ L + +++ A ++ +K ELNV ++ I
Sbjct: 611 EEMKTKGF--EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 537 SNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKV 586
G + EA ++M + P T+ L+ L K A EI E +
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVK------AEEINEAL 712
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/500 (23%), Positives = 216/500 (43%), Gaps = 41/500 (8%)
Query: 111 INRCGDAGNLGYRYYMWASKQPNYVHSYDV-YRALIKSLSKMRKFGAVWALMEEMRKEKP 169
I+ G G + + + + N + +V Y ++I L K + + E + K +
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR- 303
Query: 170 QLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAA 229
++ T + ++ + SA +A +L+ G P + C+L L K V EA
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 230 KLFDEMRERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYA 289
K+F+EM++ P+L + L+ C+ GKL A + M+ AG P++ N ++
Sbjct: 364 KVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLC 423
Query: 290 QMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVV 349
+ K+ +A + +EM K C P+ ++ LI L ++ ++++A + + +M S C + +
Sbjct: 424 KSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSI 483
Query: 350 TYTTLISGFCKSRKIDRCYEILDSMIQRGILPN-QL--TYLHIMLAHEKKEE-------- 398
YT+LI F + + ++I MI + P+ QL TY+ M + E+
Sbjct: 484 VYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543
Query: 399 ------------------------LEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGEL 434
E EL M++ GCV D YN+VI CK G++
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603
Query: 435 KEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGL-LSAPQYGTL 493
+A + EM+ P ++ ++ G L EA F+E + + L+ Y +
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS- 662
Query: 494 KALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMD 553
L++ + +++ A + ++ KG N+Y W + +L + EA M +
Sbjct: 663 --LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 554 ADVMPQPDTFAKLMRGLKKL 573
P T+ L+ GL K+
Sbjct: 721 LKCTPNQVTYGILINGLCKV 740
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 174/433 (40%), Gaps = 73/433 (16%)
Query: 49 KTKEDDCKCNNTTDTHGSHNEFSH----DVEKIFRILKKFHSRLPKLELALQHSGVVLRP 104
K + DC+ N+ T N F+H D KI++ + + P L+L + + +
Sbjct: 472 KMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCS-PDLQLLNTYMDCMFKA 530
Query: 105 GLTERVINRCGDAGNLGYRYYMWASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEM 164
G E+ R K +V Y LI L K + L M
Sbjct: 531 GEPEKG------------RAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578
Query: 165 RKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSS 224
KE+ ++ T + I++ F V KA ++L+EM G EP +G ++D L K
Sbjct: 579 -KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDR 637
Query: 225 VKEAAKLFDEMR-ERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNN 283
+ EA LF+E + +R + ++ ++SL+ G+ K G++ EA +L ++ G P++ +N+
Sbjct: 638 LDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNS 697
Query: 284 LL-----------------------------------SGYAQMGKMTDAFELLKEMRRKG 308
LL +G ++ K AF +EM+++G
Sbjct: 698 LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757
Query: 309 CDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCY 368
P+ SYT +I L + + EA F + +G D Y +I G + +
Sbjct: 758 MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAF 817
Query: 369 EILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLA 428
+ + +RG LP H K CV L+ + K C+ + V+R
Sbjct: 818 SLFEETRRRG-LP----------IHNKT-----CVVLLDTLHKNDCLEQAAIVGAVLR-- 859
Query: 429 CKLGELKEAVNVW 441
+ G+ + A W
Sbjct: 860 -ETGKARHAARSW 871
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 230/499 (46%), Gaps = 57/499 (11%)
Query: 90 KLELALQHSGVVLRPGLTERVINRCGDAGNLGYRYY----MWASK-QPNYVHSYDVYRAL 144
+L + ++ +V+ P V+ +G+L Y M AS +PN V +Y L
Sbjct: 403 ELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV----IYTTL 458
Query: 145 IKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVI--LMRRFASARMVKKAIEVLDEMPK 202
IK+ + +FG +++EM K Q I ++F L+ + A+ + +A L EM +
Sbjct: 459 IKTFLQNSRFGDAMRVLKEM---KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 203 YGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRE-RFKPSLRHFTSLLYGWCKEGKLVE 261
G +P+ F +G + + S A K EMRE P+ T L+ +CK+GK++E
Sbjct: 516 NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIE 575
Query: 262 AKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQ 321
A M D G D Y L++G + K+ DA E+ +EMR KG P+ SY VLI
Sbjct: 576 ACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Query: 322 ALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILP 381
++ M++A+ F EM G +V+ Y L+ GFC+S +I++ E+LD M +G+ P
Sbjct: 636 GFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHP 695
Query: 382 NQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVW 441
N +TY I+ + K +L E L EM+ G VPD Y ++ C+L +++ A+ ++
Sbjct: 696 NAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 442 NEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLL 501
GT+ +GC A AL+N +
Sbjct: 756 ----------GTNK----------KGC------------------ASSTAPFNALINWVF 777
Query: 502 RAQKVEMAKDVWSCIVTKGCE----LNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVM 557
+ K E+ +V + ++ + N + I I L G+++ A M +A++M
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM 837
Query: 558 PQPDTFAKLMRGLKKLYNR 576
P T+ L+ G K+ R
Sbjct: 838 PTVITYTSLLNGYDKMGRR 856
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/435 (24%), Positives = 200/435 (45%), Gaps = 7/435 (1%)
Query: 136 HSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIE 195
++YDV LI L K+++ +L+ EM L + +L+ R A
Sbjct: 278 YTYDV---LIDGLCKIKRLEDAKSLLVEMDSLGVSL-DNHTYSLLIDGLLKGRNADAAKG 333
Query: 196 VLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RERFKPSLRHFTSLLYGWC 254
++ EM +G +++ C + + K +++A LFD M P + + SL+ G+C
Sbjct: 334 LVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYC 393
Query: 255 KEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNAN 314
+E + + +LV+MK Y ++ G G + A+ ++KEM GC PN
Sbjct: 394 REKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453
Query: 315 SYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSM 374
YT LI+ + + +A R EM+ G D+ Y +LI G K++++D L M
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 375 IQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGEL 434
++ G+ PN TY + + + E + + EMR+ G +P+ +I CK G++
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573
Query: 435 KEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLK 494
EA + + M + ++ V+++G + +A E F+EM G+G+ AP +
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI--APDVFSYG 631
Query: 495 ALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDA 554
L+N + ++ A ++ +V +G NV + + + +G +++A +M
Sbjct: 632 VLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 555 DVMPQPDTFAKLMRG 569
+ P T+ ++ G
Sbjct: 692 GLHPNAVTYCTIIDG 706
Score = 137 bits (344), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 194/443 (43%), Gaps = 12/443 (2%)
Query: 182 RRFASARM-VKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERFK 240
+ F +A + V A+++ + M G P ++ + L+D LCK +++A L EM
Sbjct: 249 KEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGV 308
Query: 241 PSLRHFTSLLYGWCKEGKLVEAKYVLV-QMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFE 299
H SLL +G+ +A LV +M G +Y+ + ++ G M A
Sbjct: 309 SLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKA 368
Query: 300 LLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFC 359
L M G P A +Y LI+ CR + + + VEM++ TY T++ G C
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428
Query: 360 KSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVS 419
S +D Y I+ MI G PN + Y ++ + + + ++ EM++ G PD+
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIF 488
Query: 420 NYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEM 479
YN +I K + EA + EM L P ++ + G++ A +Y KEM
Sbjct: 489 CYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM 548
Query: 480 VGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNG 539
G+L P L+N + KV A + +V +G + +T+ ++ LF N
Sbjct: 549 RECGVL--PNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606
Query: 540 HVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEI-TEKVRKMAAERQITFK 598
V +A +M + P ++ L+ G KL N Q A+ I E V + I +
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666
Query: 599 M----YKRRGERDLKEKAKKQVD 617
M + R GE EKAK+ +D
Sbjct: 667 MLLGGFCRSGE---IEKAKELLD 686
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 158/368 (42%), Gaps = 51/368 (13%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFV--ILMRRFASARMVKKAIEVLD 198
Y L+ L K K + EMR + I +VF +L+ F+ ++KA + D
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKG---IAPDVFSYGVLINGFSKLGNMQKASSIFD 651
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEG 257
EM + G P+ ++ LL C++ +++A +L DEM + P+ + +++ G+CK G
Sbjct: 652 EMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGC-------- 309
L EA + +MK G PD VY L+ G ++ + A + +KGC
Sbjct: 712 DLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPFN 770
Query: 310 -------------------------------DPNANSYTVLIQALCRMEKMEEANRAFVE 338
PN +Y ++I LC+ +E A F +
Sbjct: 771 ALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQ 830
Query: 339 MERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEE 398
M+ + V+TYT+L++G+ K + + + D I GI P+ + Y I+ A K+
Sbjct: 831 MQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGM 890
Query: 399 LEECVELMGEM-----RKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGT 453
+ + L+ +M GC +S ++ K+GE++ A V M P +
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDS 950
Query: 454 DSFVVMVH 461
+ + +++
Sbjct: 951 ATVIELIN 958
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 161/413 (38%), Gaps = 59/413 (14%)
Query: 204 GCEPDEFVFGCLLDALCKNSSVKEAAKLFDE-MRERFKPSLRHFTSLLYGWCKEGKLVEA 262
G D +FG L D ++EA +F M P L LL + +L
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205
Query: 263 KYVLVQMKDAGFEPDIVVYNNLL-----SGYAQMGK----------------MTDAFELL 301
V M + D+ Y+ L+ +G Q+GK + A +L
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 302 KEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKS 361
+ M KG P +Y VLI LC+++++E+A VEM+ G D TY+ LI G K
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 362 RKID-----------------------------------RCYEILDSMIQRGILPNQLTY 386
R D + + D MI G++P Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 387 LHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEA 446
++ + +++ + + EL+ EM+K V Y V++ C G+L A N+ EM A
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 447 ASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKV 506
+ P + ++ FL +A KEM +G+ AP +L+ L +A+++
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI--APDIFCYNSLIIGLSKAKRM 503
Query: 507 EMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQ 559
+ A+ +V G + N + + +I A Y +M + V+P
Sbjct: 504 DEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/505 (25%), Positives = 228/505 (45%), Gaps = 18/505 (3%)
Query: 136 HSYDVYRALIKSLSKMRKFGAVWALMEEMRK--EKPQLITTEVFVILMRRFASARMVKKA 193
H+ Y LI + + AL+ +M K +P ++T L+ + + + A
Sbjct: 43 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSS---LLNGYCHGKRISDA 99
Query: 194 IEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYG 252
+ ++D+M + G PD F L+ L ++ EA L D M +R +P+L + ++ G
Sbjct: 100 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 159
Query: 253 WCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPN 312
CK G + A +L +M+ A E D+V++N ++ + + DA L KEM KG PN
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 313 ANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILD 372
+Y+ LI LC + +A++ +M ++VT+ LI F K K ++ D
Sbjct: 220 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHD 279
Query: 373 SMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLG 432
MI+R I P+ TY ++ + L++ ++ M C PD+ YN +I+ CK
Sbjct: 280 DMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSK 339
Query: 433 ELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGT 492
+++ ++ EM L T ++ ++ G G A + FK+MV G+ P T
Sbjct: 340 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV--PPDIMT 397
Query: 493 LKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMM 552
LL+ L K+E A +V+ + +L++Y +T I + G V + +
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 553 DADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRKMAAERQI----TFKMYKRRGERDL 608
V P T+ ++ G L ++++ E ++KM + + T+ R RD
Sbjct: 458 LKGVKPNVVTYNTMISG---LCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514
Query: 609 KEKAKKQVDGRKRRARQRRWGGGRS 633
+ A ++ R R R+ G S
Sbjct: 515 DKAASAEL---IREMRSCRFVGDAS 536
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 203/407 (49%), Gaps = 8/407 (1%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFV--ILMRRFASARMVKKAIEVLD 198
+ L+ +++KM+KF V +L E+M++ I+ ++ IL+ F + A+ +L
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLG---ISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEG 257
+M K G EP LL+ C + +A L D+M E ++P FT+L++G
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYT 317
K EA ++ +M G +P++V Y +++G + G + AF LL +M + + +
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 318 VLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQR 377
+I +LC+ +++A F EME G +VVTY++LIS C + ++L MI++
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 378 GILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEA 437
I PN +T+ ++ A K+ + E +L +M K PD+ YN +I C L +A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 438 VNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALL 497
++ M + P D++ ++ GF + + E F+EM RGL+ T L+
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV--TYTTLI 367
Query: 498 NSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEA 544
L + A+ V+ +V+ G ++ ++I + L +NG +++A
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 414
Score = 162 bits (410), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 182/390 (46%), Gaps = 12/390 (3%)
Query: 131 QPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMV 190
QPN V Y ++ L K + L+ +M K + +F ++ R V
Sbjct: 147 QPNLV----TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE-ADVVIFNTIIDSLCKYRHV 201
Query: 191 KKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSL 249
A+ + EM G P+ + L+ LC +A++L +M E+ P+L F +L
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261
Query: 250 LYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGC 309
+ + KEGK VEA+ + M +PDI YN+L++G+ ++ A ++ + M K C
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 310 DPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYE 369
P+ ++Y LI+ C+ +++E+ F EM G D VTYTTLI G D +
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 370 ILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLAC 429
+ M+ G+ P+ +TY ++ +LE+ +E+ M+K D+ Y +I C
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 430 KLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQ 489
K G++ + +++ + + P ++ M+ G + L EA K+M G L P
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL--PD 499
Query: 490 YGTLKALLNSLLR----AQKVEMAKDVWSC 515
GT L+ + LR A E+ +++ SC
Sbjct: 500 SGTYNTLIRAHLRDGDKAASAELIREMRSC 529
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 218/458 (47%), Gaps = 10/458 (2%)
Query: 134 YVHSYDVYRALIKSLSKMRKFGAVWALMEEMRK--EKPQLITTEVFVILMRRFASARMVK 191
Y S +L+ ++ AL+++M + +P IT F L+
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTIT---FTTLIHGLFLHNKAS 132
Query: 192 KAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMR-ERFKPSLRHFTSLL 250
+A+ ++D M + GC+P+ +G +++ LCK + A L ++M + + + F +++
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 251 YGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCD 310
CK + +A + +M+ G P++V Y++L+S G+ +DA +LL +M K +
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 311 PNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEI 370
PN ++ LI A + K EA + +M + + D+ TY +LI+GFC ++D+ ++
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 371 LDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACK 430
+ M+ + P+ TY ++ K + +E+ EL EM G V D Y +I+
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 431 LGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGL-LSAPQ 489
G+ A V+ +M + + P ++ +++ G G L +A E F M + L
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 490 YGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCL 549
Y T ++ + +A KV+ D++ + KG + NV + I L S ++EA +
Sbjct: 433 YTT---MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 489
Query: 550 DMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVR 587
M + +P T+ L+R + ++ +AE+ ++R
Sbjct: 490 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 203/426 (47%), Gaps = 4/426 (0%)
Query: 164 MRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNS 223
M K +P L + F L+ A + I + ++M + G + + + L++ C+ S
Sbjct: 1 MVKSRP-LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 59
Query: 224 SVKEAAKLFDEM-RERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYN 282
+ A L +M + ++PS+ +SLL G+C ++ +A ++ QM + G+ PD + +
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 283 NLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERS 342
L+ G K ++A L+ M ++GC PN +Y V++ LC+ ++ A +ME +
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 343 GCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEEC 402
EADVV + T+I CK R +D + M +GI PN +TY ++ +
Sbjct: 180 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 239
Query: 403 VELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHG 462
+L+ +M + P++ +N +I K G+ EA + ++M S+ P ++ +++G
Sbjct: 240 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLING 299
Query: 463 FLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCE 522
F L +A + F+ MV + P T L+ ++++VE +++ + +G
Sbjct: 300 FCMHDRLDKAKQMFEFMVSKDCF--PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 523 LNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEI 582
+ +T I LF +G A M+ V P T++ L+ GL + A E+
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 583 TEKVRK 588
+ ++K
Sbjct: 418 FDYMQK 423
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 138/297 (46%), Gaps = 10/297 (3%)
Query: 131 QPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEM--RKEKPQLITTEVFVILMRRFASAR 188
PN V + ALI + K KF L ++M R P + T + L+ F
Sbjct: 252 NPNLV----TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFT---YNSLINGFCMHD 304
Query: 189 MVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFT 247
+ KA ++ + M C PD + L+ CK+ V++ +LF EM R +T
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 364
Query: 248 SLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRK 307
+L+ G +G A+ V QM G PDI+ Y+ LL G GK+ A E+ M++
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 308 GCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRC 367
+ YT +I+ +C+ K+++ F + G + +VVTY T+ISG C R +
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484
Query: 368 YEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVV 424
Y +L M + G LP+ TY ++ AH + + EL+ EMR V D S +V
Sbjct: 485 YALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 541
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/183 (18%), Positives = 76/183 (41%), Gaps = 2/183 (1%)
Query: 415 VPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACE 474
+P + +N ++ K+ + +++ +M+ +S ++ ++++ F + + A
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 475 YFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHS 534
+M+ G P TL +LLN +++ A + +V G + +T IH
Sbjct: 67 LLGKMMKLGY--EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Query: 535 LFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRKMAAERQ 594
LF + EA + M+ P T+ ++ GL K + +A + K+ E
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 595 ITF 597
+
Sbjct: 185 VVI 187
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/444 (27%), Positives = 217/444 (48%), Gaps = 12/444 (2%)
Query: 102 LRPGLTERVINRCGDAGNLGYRYYMWASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALM 161
LR GL + + DA +L +R + + P + + L +++K +++ V AL
Sbjct: 60 LRSGLVDI---KADDAIDL-FRDMIHSRPLPTVID----FSRLFSAIAKTKQYDLVLALC 111
Query: 162 EEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCK 221
++M + K I++ F R + A + ++ K G EP+ F L++ LC
Sbjct: 112 KQM-ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCL 170
Query: 222 NSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVV 280
V EA +L D M E KP L +L+ G C GK EA ++ +M + G +P+ V
Sbjct: 171 EGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVT 230
Query: 281 YNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEME 340
Y +L+ + G+ A ELL++M + +A Y+++I LC+ ++ A F EME
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEME 290
Query: 341 RSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELE 400
G +++TY LI GFC + + D ++L MI+R I PN +T+ ++ + K+ +L
Sbjct: 291 MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLR 350
Query: 401 ECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMV 460
E EL EM G PD Y +I CK L +A + + M + P +F +++
Sbjct: 351 EAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILI 410
Query: 461 HGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKG 520
+G+ + + E F++M RG+++ T L+ K+ +AK+++ +V++
Sbjct: 411 NGYCKANRIDDGLELFRKMSLRGVVADTV--TYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 521 CELNVYAWTIWIHSLFSNGHVKEA 544
N+ + I + L NG ++A
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKA 492
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 202/428 (47%), Gaps = 22/428 (5%)
Query: 131 QPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEV--FVILMRRFASAR 188
QPN V V + KS G ME +RK + + I + + I++
Sbjct: 225 QPNAVTYGPVLNVMCKS-------GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 277
Query: 189 MVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLF-DEMRERFKPSLRHFT 247
+ A + +EM G + + L+ C + AKL D ++ + P++ F+
Sbjct: 278 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFS 337
Query: 248 SLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRK 307
L+ + KEGKL EA+ + +M G PD + Y +L+ G+ + + A +++ M K
Sbjct: 338 VLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 308 GCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRC 367
GCDPN ++ +LI C+ ++++ F +M G AD VTY TLI GFC+ K++
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 368 YEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRL 427
E+ M+ R + PN +TY ++ E E+ +E+ ++ K D+ YN++I
Sbjct: 458 KELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHG 517
Query: 428 ACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSA 487
C ++ +A +++ + + PG ++ +M+ G +G L EA F++M G A
Sbjct: 518 MCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG--HA 575
Query: 488 PQYGTLKALLNSLLRAQ--KVEMAKDVWSCIVTKGCELNVYAWTI-WIHSLFSNGHVKEA 544
P T N L+RA + K V K C +V A TI + + S+G +K++
Sbjct: 576 PDGWT----YNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKS 631
Query: 545 CSYCLDMM 552
LDM+
Sbjct: 632 ---FLDML 636
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 191/442 (43%), Gaps = 40/442 (9%)
Query: 160 LMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDAL 219
L +M +P L T F L A + + + +M G + + +++
Sbjct: 75 LFRDMIHSRP-LPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCF 133
Query: 220 CKNSSVKEAAKLFDEM-RERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDI 278
C+ + A ++ + ++P+ F++L+ G C EG++ EA ++ +M + G +PD+
Sbjct: 134 CRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDL 193
Query: 279 VVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVE 338
+ N L++G GK +A L+ +M GC PNA +Y ++ +C+ + A +
Sbjct: 194 ITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 339 MERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEE 398
ME + D V Y+ +I G CK +D + + + M +GI N
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN---------------- 297
Query: 399 LEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVV 458
+ YN++I C G + + +M ++P +F V
Sbjct: 298 -------------------IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 459 MVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVT 518
++ F+ +G L EA E KEM+ RG+ AP T +L++ + ++ A + +V+
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGI--APDTITYTSLIDGFCKENHLDKANQMVDLMVS 396
Query: 519 KGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQI 578
KGC+ N+ + I I+ + + M V+ T+ L++G +L +
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 456
Query: 579 AAEI-TEKVRKMAAERQITFKM 599
A E+ E V + +T+K+
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKI 478
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 142/316 (44%), Gaps = 6/316 (1%)
Query: 284 LLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSG 343
L SG + K DA +L ++M P ++ L A+ + ++ + +ME G
Sbjct: 60 LRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKG 118
Query: 344 CEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECV 403
++ T + +I+ FC+ RK+ + + +I+ G PN +T+ ++ + + E +
Sbjct: 119 IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL 178
Query: 404 ELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGF 463
EL+ M ++G PD+ N ++ C G+ EA+ + ++M P ++ +++
Sbjct: 179 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 238
Query: 464 LGQGCLIEACEYFKEMVGRGL-LSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCE 522
G A E ++M R + L A +Y +++ L + ++ A ++++ + KG
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSI---IIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 523 LNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEI 582
N+ + I I + G + DM+ + P TF+ L+ K + A E+
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355
Query: 583 -TEKVRKMAAERQITF 597
E + + A IT+
Sbjct: 356 HKEMIHRGIAPDTITY 371
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/474 (27%), Positives = 206/474 (43%), Gaps = 44/474 (9%)
Query: 137 SYDVYRALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASARMVKKAI 194
S Y +L+ L K R +V L++EM KP + T F I +R A + +A
Sbjct: 222 SLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYT---FTICIRVLGRAGKINEAY 278
Query: 195 EVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRE-RFKPSLRHFTSLLYGW 253
E+L M GC PD + L+DALC + A ++F++M+ R KP + +LL +
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338
Query: 254 CKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNA 313
L K +M+ G PD+V + L+ + G +AF+ L MR +G PN
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398
Query: 314 NSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDS 373
++Y LI L R+ ++++A F ME G + TY I + KS E +
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458
Query: 374 MIQRGILPN-----------------------------------QLTYLHIMLAHEKKEE 398
M +GI PN +TY +M + K E
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 399 LEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVV 458
++E ++L+ EM + GC PDV N +I K + EA ++ M+ L P ++
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 459 MVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVT 518
++ G G + EA E F+ MV +G P T L + L + +V +A + ++
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKG--CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD 636
Query: 519 KGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKK 572
GC +V+ + I L NG VKEA + M V P T L+ G+ K
Sbjct: 637 MGCVPDVFTYNTIIFGLVKNGQVKEAMCF-FHQMKKLVYPDFVTLCTLLPGVVK 689
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/516 (24%), Positives = 232/516 (44%), Gaps = 46/516 (8%)
Query: 122 YRYYMWASKQPNYVHSYDVYRALIKSL---SKMRKFGAVWALMEEMRKEKPQLITTEVFV 178
+ Y+ + N VH+ + ++++L K+ + V+ LM++ ++ T ++
Sbjct: 102 FSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKR----DTNTYL 157
Query: 179 ILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RE 237
+ + + +K+A L +M ++G + + + L+ L K+ EA +++ M E
Sbjct: 158 TIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILE 217
Query: 238 RFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDA 297
F+PSL+ ++SL+ G K + +L +M+ G +P++ + + + GK+ +A
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 298 FELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAF--------------------- 336
+E+LK M +GC P+ +YTVLI ALC K++ A F
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 337 --------------VEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPN 382
EME+ G DVVT+T L+ CK+ ++ LD M +GILPN
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Query: 383 QLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWN 442
TY ++ + L++ +EL G M +G P Y V I K G+ A+ +
Sbjct: 398 LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE 457
Query: 443 EMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLR 502
+M+ ++P + ++ G EA + F + GL+ P T ++ +
Sbjct: 458 KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV--PDSVTYNMMMKCYSK 515
Query: 503 AQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDT 562
+++ A + S ++ GCE +V I++L+ V EA + M + + P T
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 575
Query: 563 FAKLMRGLKKLYNRQIAAEITEK-VRKMAAERQITF 597
+ L+ GL K Q A E+ E V+K ITF
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611
Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 176/340 (51%), Gaps = 7/340 (2%)
Query: 110 VINRCGDAGNLGYRYYMWASKQPN-YVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEK 168
+++R D +L W+ + + +V + L+ +L K FG + ++ MR +
Sbjct: 334 LLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Query: 169 --PQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVK 226
P L T + + R + A+E+ M G +P + + +D K+
Sbjct: 394 ILPNLHTYNTLICGLLR---VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSV 450
Query: 227 EAAKLFDEMRER-FKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLL 285
A + F++M+ + P++ + LY K G+ EAK + +KD G PD V YN ++
Sbjct: 451 SALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMM 510
Query: 286 SGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCE 345
Y+++G++ +A +LL EM GC+P+ LI L + ++++EA + F+ M+ +
Sbjct: 511 KCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLK 570
Query: 346 ADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVEL 405
VVTY TL++G K+ KI E+ + M+Q+G PN +T+ + K +E+ +++
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKM 630
Query: 406 MGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEME 445
+ +M +GCVPDV YN +I K G++KEA+ +++M+
Sbjct: 631 LFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK 670
Score = 139 bits (350), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 175/382 (45%), Gaps = 20/382 (5%)
Query: 95 LQHSGVVLRPGLTERVINR--CGDAGNLGYRYYMWASKQPNYVHSYDVYRALIKSLSKMR 152
L +G+ +ER++ C D ++ ++ K N + ++ K L
Sbjct: 724 LAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQP 783
Query: 153 KFGAVWALMEEMRKEKPQLITTEVFV---------------ILMRRFASARMVKKAIEVL 197
K L+ + + I +VF+ L+ + + + + E+
Sbjct: 784 KLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELY 843
Query: 198 DEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLF-DEMRER-FKPSLRHFTSLLYGWCK 255
EM + CE + ++ L K +V +A L+ D M +R F P+ + L+ G K
Sbjct: 844 KEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSK 903
Query: 256 EGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANS 315
G+L EAK + M D G P+ +YN L++G+ + G+ A L K M ++G P+ +
Sbjct: 904 SGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKT 963
Query: 316 YTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSM- 374
Y+VL+ LC + +++E F E++ SG DVV Y +I+G KS +++ + + M
Sbjct: 964 YSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMK 1023
Query: 375 IQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGEL 434
RGI P+ TY ++L +EE ++ E+++ G P+V +N +IR G+
Sbjct: 1024 TSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKP 1083
Query: 435 KEAVNVWNEMEAASLSPGTDSF 456
+ A V+ M SP T ++
Sbjct: 1084 EHAYAVYQTMVTGGFSPNTGTY 1105
Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 167/352 (47%), Gaps = 8/352 (2%)
Query: 220 CKNSSVKEAAKLFDEMRERF--KPSLRHFTSLLYGWCKEGKLVE-AKYVLVQMKDAGFEP 276
CK+++V A LF++ + +P L + +LL G E ++E A+ V +Q+K G P
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTY-NLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 277 DIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAF 336
D+ YN LL Y + GK+ + FEL KEM C+ N ++ ++I L + +++A +
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 337 VE-MERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEK 395
+ M TY LI G KS ++ ++ + M+ G PN Y ++ K
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 396 KEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDS 455
E + L M K G PD+ Y+V++ C +G + E ++ + E++ + L+P
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 456 FVVMVHGFLGQGCLIEACEYFKEM-VGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWS 514
+ ++++G L EA F EM RG+ P T +L+ +L A VE A +++
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTSRGI--TPDLYTYNSLILNLGIAGMVEEAGKIYN 1056
Query: 515 CIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKL 566
I G E NV+ + I +G + A + M+ P T+ +L
Sbjct: 1057 EIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 117 bits (294), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 203/467 (43%), Gaps = 16/467 (3%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASARMVKKAIEVLD 198
Y L+ L K K L E M ++ P IT F L V A+++L
Sbjct: 576 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT---FNTLFDCLCKNDEVTLALKMLF 632
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERFKPSLRHFTSLLYGWCKEGK 258
+M GC PD F + ++ L KN VKEA F +M++ P +LL G K
Sbjct: 633 KMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVK-AS 691
Query: 259 LVEAKYVLVQ--MKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSY 316
L+E Y ++ + + +P + + +L+ + +A + + G + +S
Sbjct: 692 LIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSI 751
Query: 317 TV-LIQALCRMEKMEEANRAFVEMERS-GCEADVVTYTTLISGFCKSRKIDRCYEILDSM 374
V +I+ C+ + A F + + G + + TY LI G ++ I+ ++ +
Sbjct: 752 LVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQV 811
Query: 375 IQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGEL 434
G +P+ TY ++ A+ K +++E EL EM C + +N+VI K G +
Sbjct: 812 KSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNV 871
Query: 435 KEAVNVWNE-MEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTL 493
+A++++ + M SP ++ ++ G G L EA + F+ M+ G P
Sbjct: 872 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYG--CRPNCAIY 929
Query: 494 KALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMD 553
L+N +A + + A ++ +V +G ++ +++ + L G V E Y ++ +
Sbjct: 930 NILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE 989
Query: 554 ADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRKMAAERQITFKMY 600
+ + P + ++ GL K + + A + +M R IT +Y
Sbjct: 990 SGLNPDVVCYNLIINGLGKSHRLEEALVL---FNEMKTSRGITPDLY 1033
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 172 bits (436), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 212/435 (48%), Gaps = 8/435 (1%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFV--ILMRRFASARMVKKAIEVLD 198
+ L+ +++KM KF V +L E M+ + I+ +++ IL+ F + A+ VL
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLR---ISYDLYSYNILINCFCRRSQLPLALAVLG 139
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RERFKPSLRHFTSLLYGWCKEG 257
+M K G EPD LL+ C + EA L D+M ++P+ F +L++G
Sbjct: 140 KMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 199
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYT 317
K EA ++ +M G +PD+ Y +++G + G + A LLK+M + + + YT
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 318 VLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQR 377
+I ALC + + +A F EM+ G +VVTY +LI C + +L MI+R
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 378 GILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEA 437
I PN +T+ ++ A K+ +L E +L EM K PD+ Y+ +I C L EA
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 438 VNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALL 497
+++ M + P ++ ++ GF + E E F+EM RGL+ T L+
Sbjct: 380 KHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV--TYNTLI 437
Query: 498 NSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVM 557
L +A +MA+ ++ +V+ G ++ ++I + L G +++A + + +
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 497
Query: 558 PQPDTFAKLMRGLKK 572
P T+ ++ G+ K
Sbjct: 498 PDIYTYNIMIEGMCK 512
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 190/380 (50%), Gaps = 8/380 (2%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEM 200
Y ++ L K +L+++M K K + ++ ++ + + V A+ + EM
Sbjct: 223 YGTVVNGLCKRGDIDLALSLLKKMEKGKIE-ADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 201 PKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEGKL 259
G P+ + L+ LC +A++L +M ER P++ F++L+ + KEGKL
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 260 VEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVL 319
VEA+ + +M +PDI Y++L++G+ ++ +A + + M K C PN +Y L
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 320 IQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGI 379
I+ C+ +++EE F EM + G + VTY TLI G ++ D +I M+ G+
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461
Query: 380 LPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVN 439
P+ +TY ++ K +LE+ + + ++K PD+ YN++I CK G++++ +
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521
Query: 440 VWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNS 499
++ + + P + M+ GF +G EA F+EM G L P GT L+ +
Sbjct: 522 LFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL--PNSGTYNTLIRA 579
Query: 500 LLR----AQKVEMAKDVWSC 515
LR A E+ K++ SC
Sbjct: 580 RLRDGDKAASAELIKEMRSC 599
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/439 (25%), Positives = 199/439 (45%), Gaps = 10/439 (2%)
Query: 137 SYDVY--RALIKSLSKMRKFGAVWALMEEMRK--EKPQLITTEVFVILMRRFASARMVKK 192
SYD+Y LI + + A++ +M K +P ++T L+ + + + +
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSS---LLNGYCHGKRISE 168
Query: 193 AIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLY 251
A+ ++D+M +P+ F L+ L ++ EA L D M R +P L + +++
Sbjct: 169 AVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 228
Query: 252 GWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDP 311
G CK G + A +L +M+ E D+V+Y ++ + DA L EM KG P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 312 NANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEIL 371
N +Y LI+ LC + +A+R +M +VVT++ LI F K K+ ++
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 372 DSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKL 431
D MI+R I P+ TY ++ + L+E + M C P+V YN +I+ CK
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 432 GELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYG 491
++E + ++ EM L T ++ ++ G G A + FK+MV G+ P
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV--PPDII 466
Query: 492 TLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDM 551
T LL+ L + K+E A V+ + E ++Y + I I + G V++ +
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 552 MDADVMPQPDTFAKLMRGL 570
V P + ++ G
Sbjct: 527 SLKGVKPNVIIYTTMISGF 545
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 186/395 (47%), Gaps = 3/395 (0%)
Query: 193 AIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRE-RFKPSLRHFTSLLY 251
A+++ EM + P F LL A+ K + L + M+ R L + L+
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 252 GWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDP 311
+C+ +L A VL +M G+EPDIV ++LL+GY ++++A L+ +M P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 312 NANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEIL 371
N ++ LI L K EA M GC+ D+ TY T+++G CK ID +L
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 372 DSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKL 431
M + I + + Y I+ A + + + + L EM G P+V YN +IR C
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 432 GELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYG 491
G +A + ++M ++P +F ++ F+ +G L+EA + + EM+ R + P
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI--DPDIF 361
Query: 492 TLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDM 551
T +L+N +++ AK ++ +++K C NV + I V+E +M
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 552 MDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKV 586
++ T+ L++GL + + +A +I +K+
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 141/316 (44%), Gaps = 8/316 (2%)
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYT 317
KL +A + +M + P IV +N LLS A+M K L + M+ + SY
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 318 VLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQR 377
+LI CR ++ A +M + G E D+VT ++L++G+C ++I ++D M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 378 GILPNQLTY---LHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGEL 434
PN +T+ +H + H K E V L+ M GC PD+ Y V+ CK G++
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKA---SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 435 KEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLK 494
A+++ +ME + + ++ + +A F EM +G+ P T
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI--RPNVVTYN 294
Query: 495 ALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDA 554
+L+ L + A + S ++ + NV ++ I + G + EA +M+
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 555 DVMPQPDTFAKLMRGL 570
+ P T++ L+ G
Sbjct: 355 SIDPDIFTYSSLINGF 370
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 86/200 (43%), Gaps = 2/200 (1%)
Query: 398 ELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFV 457
+L++ V+L GEM + +P + +N ++ K+ + +++ M+ +S S+
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 458 VMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIV 517
++++ F + L A +M+ G P TL +LLN +++ A + +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGY--EPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 518 TKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQ 577
+ N + IH LF + EA + M+ P T+ ++ GL K +
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 578 IAAEITEKVRKMAAERQITF 597
+A + +K+ K E +
Sbjct: 238 LALSLLKKMEKGKIEADVVI 257
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 221/507 (43%), Gaps = 39/507 (7%)
Query: 130 KQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARM 189
K+ + H+ YR++I+ L KF A+ ++ +MR+ + V+V M+ +
Sbjct: 32 KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGK 91
Query: 190 VKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTS 248
V++A+ V + M Y CEP F + ++ L + +A K++ MR+R P + FT
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 249 LLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMR--- 305
+ +CK + A +L M G E ++V Y ++ G+ + + +EL +M
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 306 --------------------------------RKGCDPNANSYTVLIQALCRMEKMEEAN 333
++G PN +Y + IQ LC+ +++ A
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 334 RAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAH 393
R + G + DV+TY LI G CK+ K L M+ G+ P+ TY ++ +
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 394 EKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGT 453
K ++ ++G+ G VPD Y +I C GE A+ ++NE + P
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 454 DSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVW 513
+ ++ G QG ++EA + EM +GL+ P+ T L+N L + V A +
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLI--PEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 514 SCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKL 573
+++KG +++ + I IH + ++ A M+D V P T+ L+ GL K
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 574 YNRQIAAEITEK-VRKMAAERQITFKM 599
+ E + V K A TF +
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNI 536
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 202/437 (46%), Gaps = 6/437 (1%)
Query: 139 DVYRALI--KSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEV 196
DVY I KS K + A L+ M + ++ + ++ F + E+
Sbjct: 145 DVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM-NVVAYCTVVGGFYEENFKAEGYEL 203
Query: 197 LDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCK 255
+M G F LL LCK VKE KL D++ +R P+L + + G C+
Sbjct: 204 FGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQ 263
Query: 256 EGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANS 315
G+L A ++ + + G +PD++ YNNL+ G + K +A L +M +G +P++ +
Sbjct: 264 RGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYT 323
Query: 316 YTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMI 375
Y LI C+ ++ A R + +G D TY +LI G C + +R + + +
Sbjct: 324 YNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEAL 383
Query: 376 QRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELK 435
+GI PN + Y ++ + + E +L EM + G +P+V +N+++ CK+G +
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVS 443
Query: 436 EAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKA 495
+A + M + P +F +++HG+ Q + A E M+ G+ P T +
Sbjct: 444 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV--DPDVYTYNS 501
Query: 496 LLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDAD 555
LLN L + K E + + +V KGC N++ + I + SL + EA +M +
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561
Query: 556 VMPQPDTFAKLMRGLKK 572
V P TF L+ G K
Sbjct: 562 VNPDAVTFGTLIDGFCK 578
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 198/417 (47%), Gaps = 11/417 (2%)
Query: 157 VWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLL 216
V L+E+ KP +IT + L+ ++A L +M G EPD + + L+
Sbjct: 274 VGCLIEQ--GPKPDVIT---YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Query: 217 DALCKNSSVKEAAKLF-DEMRERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFE 275
CK V+ A ++ D + F P + SL+ G C EG+ A + + G +
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 276 PDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRA 335
P++++YN L+ G + G + +A +L EM KG P ++ +L+ LC+M + +A+
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGL 448
Query: 336 FVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEK 395
M G D+ T+ LI G+ K++ EILD M+ G+ P+ TY ++ K
Sbjct: 449 VKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCK 508
Query: 396 KEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDS 455
+ E+ +E M + GC P++ +N+++ C+ +L EA+ + EM+ S++P +
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568
Query: 456 FVVMVHGFLGQGCLIEACEYFKEM--VGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVW 513
F ++ GF G L A F++M + S P Y ++++ V MA+ ++
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY---NIIIHAFTEKLNVTMAEKLF 625
Query: 514 SCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGL 570
+V + + Y + + + G+V + L+MM+ +P T +++ L
Sbjct: 626 QEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 136/284 (47%), Gaps = 7/284 (2%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKEK--PQLITTEVFVILMRRFASARMVKKAIEVLD 198
+ L+ L KM L++ M + P + T F IL+ +++ ++ A+E+LD
Sbjct: 429 FNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT---FNILIHGYSTQLKMENALEILD 485
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERF-KPSLRHFTSLLYGWCKEG 257
M G +PD + + LL+ LCK S ++ + + M E+ P+L F LL C+
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYR 545
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRK-GCDPNANSY 316
KL EA +L +MK+ PD V + L+ G+ + G + A+ L ++M + +Y
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY 605
Query: 317 TVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQ 376
++I A + A + F EM D TY ++ GFCK+ ++ Y+ L M++
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665
Query: 377 RGILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSN 420
G +P+ T ++ ++ + E ++ M + G VP+ N
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN 709
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/531 (25%), Positives = 244/531 (45%), Gaps = 30/531 (5%)
Query: 63 THGSHNEFSHDVEKIFRILKKFHSRL---PKLELALQHSGVVLRPGLTERVINRCGDAGN 119
T + +S D ++ + I K H+ L P LE + L P RV+ +
Sbjct: 68 TKSGTSTYSEDFDRDW-IRKVVHNDLWDDPGLEKLFD---LTLAPIWVPRVLVELKEDPK 123
Query: 120 LGYRYYMWASKQPNYVHSYDVYRALIKSLSKMRKFGAVWALMEEMRKEKPQ------LIT 173
L ++++ W+ + + HS + Y + L R + ++++EM K L +
Sbjct: 124 LAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWS 183
Query: 174 TE--------VFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSV 225
T VF L M+++AI+ +M ++ P LL K
Sbjct: 184 TRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKT 243
Query: 226 KEAAKLFDEM-RERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNL 284
+ + F +M +P++ + ++ CKEG + A+ + +MK G PD V YN++
Sbjct: 244 DDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303
Query: 285 LSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGC 344
+ G+ ++G++ D +EM+ C+P+ +Y LI C+ K+ + EM+ +G
Sbjct: 304 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 345 EADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVE 404
+ +VV+Y+TL+ FCK + + + M + G++PN+ TY ++ A+ K L +
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 405 LMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFL 464
L EM ++G +V Y +I C +KEA ++ +M+ A + P S+ ++HGF+
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 465 GQGCLIEACEYFKEMVGRGLLSAPQ---YGTLKALLNSLLRAQKVEMAKDVWSCIVTKGC 521
+ A E E+ GRG+ P YGT L SL +K+E AK V + + G
Sbjct: 484 KAKNMDRALELLNELKGRGI--KPDLLLYGTFIWGLCSL---EKIEAAKVVMNEMKECGI 538
Query: 522 ELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKK 572
+ N +T + + F +G+ E +M + D+ TF L+ GL K
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 195/405 (48%), Gaps = 3/405 (0%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEM 200
Y +I + K A L EEM K + + T + ++ F + + +EM
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEM-KFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 201 PKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEGKL 259
CEPD + L++ CK + + + EM+ KP++ +++L+ +CKEG +
Sbjct: 324 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 383
Query: 260 VEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVL 319
+A V M+ G P+ Y +L+ ++G ++DAF L EM + G + N +YT L
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 320 IQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGI 379
I LC E+M+EA F +M+ +G ++ +Y LI GF K++ +DR E+L+ + RGI
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 380 LPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVN 439
P+ L Y + E++E +M EM++ G + Y ++ K G E ++
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563
Query: 440 VWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNS 499
+ +EM+ + +F V++ G + +A +YF + L A A+++
Sbjct: 564 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQA-NAAIFTAMIDG 622
Query: 500 LLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEA 544
L + +VE A ++ +V KG + A+T + F G+V EA
Sbjct: 623 LCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 191/423 (45%), Gaps = 9/423 (2%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASARMVKKAIEVLD 198
Y ++I K+ + EEM+ +P +IT + +F + +E
Sbjct: 300 YNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPI---GLEFYR 356
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRE-RFKPSLRHFTSLLYGWCKEG 257
EM G +P+ + L+DA CK +++A K + +MR P+ +TSL+ CK G
Sbjct: 357 EMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIG 416
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYT 317
L +A + +M G E ++V Y L+ G +M +A EL +M G PN SY
Sbjct: 417 NLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYN 476
Query: 318 VLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQR 377
LI + + M+ A E++ G + D++ Y T I G C KI+ +++ M +
Sbjct: 477 ALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKEC 536
Query: 378 GILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEA 437
GI N L Y +M A+ K E + L+ EM+++ V + V+I CK + +A
Sbjct: 537 GIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKA 596
Query: 438 VNVWNEMEAA-SLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKAL 496
V+ +N + L F M+ G + A F++MV +GL+ P +L
Sbjct: 597 VDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLV--PDRTAYTSL 654
Query: 497 LNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADV 556
++ + V A + + G +L++ A+T + L +++A S+ +M+ +
Sbjct: 655 MDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 714
Query: 557 MPQ 559
P
Sbjct: 715 HPD 717
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 166/355 (46%), Gaps = 3/355 (0%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLDEM 200
Y +LI + K+ + L EM + + + L+ A +K+A E+ +M
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEW-NVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 201 PKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRER-FKPSLRHFTSLLYGWCKEGKL 259
G P+ + L+ K ++ A +L +E++ R KP L + + ++G C K+
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 523
Query: 260 VEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVL 319
AK V+ +MK+ G + + ++Y L+ Y + G T+ LL EM+ + ++ VL
Sbjct: 524 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 583
Query: 320 IQALCRMEKMEEANRAFVEMERS-GCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRG 378
I LC+ + + +A F + G +A+ +T +I G CK +++ + + M+Q+G
Sbjct: 584 IDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 643
Query: 379 ILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAV 438
++P++ Y +M + K+ + E + L +M +IG D+ Y ++ +L++A
Sbjct: 644 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKAR 703
Query: 439 NVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTL 493
+ EM + P + ++ GC+ EA E ++ LL++ L
Sbjct: 704 SFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTSDNDNAL 758
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 145/312 (46%), Gaps = 2/312 (0%)
Query: 276 PDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRA 335
P V++ L S +G + +A + +M+R P S L+ ++ K ++ R
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 336 FVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEK 395
F +M +G V TY +I CK ++ + + M RG++P+ +TY ++ K
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 396 KEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDS 455
L++ V EM+ + C PDV YN +I CK G+L + + EM+ L P S
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 456 FVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSC 515
+ +V F +G + +A +++ +M GL+ P T +L+++ + + A + +
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLV--PNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 516 IVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYN 575
++ G E NV +T I L +KEA M A V+P ++ L+ G K N
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 576 RQIAAEITEKVR 587
A E+ +++
Sbjct: 488 MDRALELLNELK 499
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/476 (27%), Positives = 218/476 (45%), Gaps = 20/476 (4%)
Query: 131 QPNYVHSYDVYRALIKSLSKMR-------KFGAVWALMEEMRKEKPQLITTEVFVILMRR 183
PN + RA K+R +F +AL EM +P L + F L+
Sbjct: 22 NPNLLGGGAAARAFSDYREKLRTGFLHSIRFEDAFALFFEMVHSQP-LPSIVDFTRLLTA 80
Query: 184 FASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEM-RERFKPS 242
A+ R + I +M YG D + F L+ C+ S + A + +M + ++PS
Sbjct: 81 TANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPS 140
Query: 243 LRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLK 302
+ F SLL+G+C ++ +A +++ M +G+EP++VVYN L+ G + G++ A ELL
Sbjct: 141 IVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLN 200
Query: 303 EMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSR 362
EM +KG + +Y L+ LC + +A R +M + DVVT+T LI F K
Sbjct: 201 EMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQG 260
Query: 363 KIDRCYEILDSMIQRGILPNQLTYLHI---MLAHEKKEELEECVELMGEMRKIGCVPDVS 419
+D E+ MIQ + PN +TY I + H + + ++ +LM GC P+V
Sbjct: 261 NLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASK---GCFPNVV 317
Query: 420 NYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEM 479
YN +I CK + E + ++ M + ++ ++HG+ G L A + F M
Sbjct: 318 TYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWM 377
Query: 480 VGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNG 539
V R + P T LL+ L ++E A + + + + A+ I IH L
Sbjct: 378 VSRRV--TPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKAD 435
Query: 540 HVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQIAAEITEKVRKMAAERQI 595
V++A + V P T+ ++ GL K R+ E E +R+M E I
Sbjct: 436 KVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR---EADELIRRMKEEGII 488
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 203/460 (44%), Gaps = 43/460 (9%)
Query: 141 YRALIKSLSKMRKFGAVWALMEEM--RKEKPQLITTEVFVILMRRFASARMVKKAIEVLD 198
Y +LI K A M EM +K +P ++T + LM + S + KA+ +
Sbjct: 440 YNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVT---YTSLMGGYCSKGKINKALRLYH 496
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRE-RFKPSLRHFTSLLYGWCKEG 257
EM G P + F LL L + +++A KLF+EM E KP+ + ++ G+C+EG
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEG 556
Query: 258 KLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSYT 317
+ +A L +M + G PD Y L+ G G+ ++A + + + C+ N YT
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 318 VLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQR 377
L+ CR K+EEA EM + G + D+V Y LI G K + + +L M R
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676
Query: 378 GILPNQLTYLHIMLAHEKKEELEECVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEA 437
G+ P+ + Y ++ A K + +E + M GCVP+ Y VI CK G + EA
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 438 VNVWNEMEAASLSPG-----------------------------------TDSFVVMVHG 462
+ ++M+ S P T ++ +++ G
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRG 796
Query: 463 FLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCE 522
F QG + EA E M+G G+ +P T ++N L R V+ A ++W+ + KG
Sbjct: 797 FCRQGRIEEASELITRMIGDGV--SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 523 LNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDT 562
+ A+ IH G + +A +M+ ++P T
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 213/474 (44%), Gaps = 43/474 (9%)
Query: 143 ALIKSLSKMRKFGAVWALMEEMRKE--KPQLITTEVFVILMRRFASARMVKKAIEVLDEM 200
AL+ L K R FG L +M +P + ++ ++R + + +A E++ M
Sbjct: 197 ALLHGLVKFRHFGLAMELFNDMVSVGIRPDVY---IYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 201 PKYGCEPDEFVFGCLLDALCKNSSVKEAA------------------------------- 229
GC+ + + L+D LCK V EA
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313
Query: 230 ----KLFDEMR-ERFKPSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNL 284
++ DEM RF PS +SL+ G K GK+ EA ++ ++ D G P++ VYN L
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL 373
Query: 285 LSGYAQMGKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGC 344
+ + K +A L M + G PN +Y++LI CR K++ A EM +G
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Query: 345 EADVVTYTTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVE 404
+ V Y +LI+G CK I + MI + + P +TY +M + K ++ + +
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493
Query: 405 LMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFL 464
L EM G P + + ++ + G +++AV ++NEM ++ P ++ VM+ G+
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYC 553
Query: 465 GQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELN 524
+G + +A E+ KEM +G++ P + + L++ L + AK + CELN
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIV--PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELN 611
Query: 525 VYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGLKKLYNRQI 578
+T +H G ++EA S C +M+ V + L+ G K +R++
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 197/460 (42%), Gaps = 29/460 (6%)
Query: 116 DAGNLGYRYYMWASKQPNYVHSYDVYRALIKSLSKMRKF--GAVWALMEEMRKEKPQLIT 173
D LG R++ + + HS + LI +L K F + +R KP
Sbjct: 82 DDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKP---- 137
Query: 174 TEVFVILMRRFASARMVKKAIEVLDEMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFD 233
++VF +L + ++ + F L+ ++ V + +F
Sbjct: 138 SDVFNVLFSCYEKCKLSSSS-----------------SFDLLIQHYVRSRRVLDGVLVFK 180
Query: 234 EMRERFK--PSLRHFTSLLYGWCKEGKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQM 291
M + P +R ++LL+G K A + M G PD+ +Y ++ ++
Sbjct: 181 MMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCEL 240
Query: 292 GKMTDAFELLKEMRRKGCDPNANSYTVLIQALCRMEKMEEANRAFVEMERSGCEADVVTY 351
++ A E++ M GCD N Y VLI LC+ +K+ EA ++ + DVVTY
Sbjct: 241 KDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTY 300
Query: 352 TTLISGFCKSRKIDRCYEILDSMIQRGILPNQLTYLHIMLAHEKKEELEECVELMGEMRK 411
TL+ G CK ++ + E++D M+ P++ ++ K+ ++EE + L+ +
Sbjct: 301 CTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD 360
Query: 412 IGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVHGFLGQGCLIE 471
G P++ YN +I CK + EA +++ M L P ++ +++ F +G L
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420
Query: 472 ACEYFKEMVGRGL-LSAPQYGTLKALLNSLLRAQKVEMAKDVWSCIVTKGCELNVYAWTI 530
A + EMV GL LS Y +L+N + + A+ + ++ K E V +T
Sbjct: 421 ALSFLGEMVDTGLKLSVYPY---NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTS 477
Query: 531 WIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKLMRGL 570
+ S G + +A +M + P TF L+ GL
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 171/384 (44%), Gaps = 49/384 (12%)
Query: 140 VYRA-LIKSLSKMRKFGAVWALMEEMRKEKPQLITTEVFVILMRRFASARMVKKAIEVLD 198
++RA LI+ K+ A W + KP +T + +++ + + KA E L
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNV-------KPNRVT---YNVMIEGYCEEGDMSKAFEFLK 566
Query: 199 EMPKYGCEPDEFVFGCLLDALCKNSSVKEAAKLFDEMRERFKPSLRH--FTSLLYGWCKE 256
EM + G PD + + L+ LC EA K+F + + L +T LL+G+C+E
Sbjct: 567 EMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 257 GKLVEAKYVLVQMKDAGFEPDIVVYNNLLSGYAQMGKMTDAFELLKEMRRKGCDPNANSY 316
GKL EA V +M G + D+V Y L+ G + F LLKEM +G P+ Y
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685
Query: 317 TVLIQALCRMEKMEEANRAFVEMERSGCEADVVTYTTLISGFCKSRKIDRCYEILDSMIQ 376
T +I A + +EA + M GC + VTYT +I+G CK+ ++ + M
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQP 745
Query: 377 RGILPNQLTY---LHIMLAHE--------------------------------KKEELEE 401
+PNQ+TY L I+ E ++ +EE
Sbjct: 746 VSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEE 805
Query: 402 CVELMGEMRKIGCVPDVSNYNVVIRLACKLGELKEAVNVWNEMEAASLSPGTDSFVVMVH 461
EL+ M G PD Y +I C+ ++K+A+ +WN M + P ++ ++H
Sbjct: 806 ASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIH 865
Query: 462 GFLGQGCLIEACEYFKEMVGRGLL 485
G G + +A E EM+ +GL+
Sbjct: 866 GCCVAGEMGKATELRNEMLRQGLI 889
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 2/140 (1%)
Query: 447 ASLSPGTDSFVVMVHGFLGQGCLIEACEYFKEMVGRGLLSAPQYGTLKALLNSLLRAQKV 506
SL P + ++HG + A E F +MV G+ P ++ SL + +
Sbjct: 186 VSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGI--RPDVYIYTGVIRSLCELKDL 243
Query: 507 EMAKDVWSCIVTKGCELNVYAWTIWIHSLFSNGHVKEACSYCLDMMDADVMPQPDTFAKL 566
AK++ + + GC++N+ + + I L V EA D+ D+ P T+ L
Sbjct: 244 SRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTL 303
Query: 567 MRGLKKLYNRQIAAEITEKV 586
+ GL K+ +I E+ +++
Sbjct: 304 VYGLCKVQEFEIGLEMMDEM 323
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 226,109,653
Number of Sequences: 539616
Number of extensions: 9178778
Number of successful extensions: 37569
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 27937
Number of HSP's gapped (non-prelim): 2738
length of query: 638
length of database: 191,569,459
effective HSP length: 124
effective length of query: 514
effective length of database: 124,657,075
effective search space: 64073736550
effective search space used: 64073736550
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)