BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006631
(637 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VZD4|DEG15_ARATH Glyoxysomal processing protease, glyoxysomal OS=Arabidopsis
thaliana GN=DEG15 PE=1 SV=2
Length = 709
Score = 606 bits (1562), Expect = e-172, Method: Compositional matrix adjust.
Identities = 338/644 (52%), Positives = 430/644 (66%), Gaps = 58/644 (9%)
Query: 1 MGLPEMAEFSRNFGVLVRVQGPDPKGLKMRRHAFHQYNSGKTTLSASGMLLPLS-FFDTK 59
M + ++ FSRNF VLV+V+GPDPKGLKMR+HAFHQY+SG TLSASG+LLP F +
Sbjct: 1 MDVSKVVSFSRNFAVLVKVEGPDPKGLKMRKHAFHQYHSGNATLSASGILLPRDIFLSGE 60
Query: 60 VAERNWGVNG----LIVTVASVVEPFLLPQYRDKDTSEGQP-ELITGSQIDFLVEGKLRS 114
VA + G L++TVASVVEPFL +R + P +LI G+ I+ +VEG+L+S
Sbjct: 61 VAAKVLFEAGQDMALVLTVASVVEPFLTLGHRTSSSISQDPVKLIPGAMIEIMVEGQLKS 120
Query: 115 EKEHEDVDKGSPEWVTAQLMMLVDIPVSSLALQSLMEASSGLPEHEWEVGWSLAPYNNSS 174
EKE +P WV AQL+ LVD+PVSS ALQSL+EASSG + W++GWSL N S
Sbjct: 121 EKE-------APFWVPAQLLSLVDVPVSSAALQSLIEASSGSKDSGWDIGWSLVSAANGS 173
Query: 175 QPLMGVVKTSIESNKISLMESHRPFAMEESSNLSLMSKSTSRVAILGVSSYLKDLPNIAL 234
QP +IE LM+ ++E N + M+KS +R+AILGV L P++
Sbjct: 174 QP-----SINIEHYSKPLMQ------LDEPHNANFMAKSATRMAILGVPLSLLGQPSMNF 222
Query: 235 TPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEG 294
+ +GD L+A+GSPFG+LSP++FFNSVS GS+AN YP S +SL++AD+RCLPGMEG
Sbjct: 223 ASSSSKGDTLVALGSPFGILSPVNFFNSVSTGSIANSYPSGSLKKSLMIADVRCLPGMEG 282
Query: 295 GPVFGEHAHFVGILIRPLRQK-SGAEIQLVIPWEAIATACSDLLLKEPQNAEKEIHINKG 353
PVF ++ H +GILIRPLRQK SG EIQLV+PW AI TACS LLL+EP
Sbjct: 283 APVFAKNGHLIGILIRPLRQKNSGVEIQLVVPWGAITTACSHLLLEEP------------ 330
Query: 354 NLNAVGNSLLFNSHILNGACCYKYEHVDSRCRSPLPIQKALASVCLITIDDGVWASGVLL 413
+ G + + S +L+ D+ + + I+KA+ SVCLIT++DGVWASG++L
Sbjct: 331 --SVEGKASQWGSEVLSVKS-------DASIPAQVAIEKAMESVCLITVNDGVWASGIIL 381
Query: 414 NDQGLILTNAHLLEPWRFGKTTVSGWRNGVSFQP-----EDSASSGHTGVDQYQKSQTLP 468
N+ GLILTNAHLLEPWR+GK G G F+P E+ +S+G +Q KSQTLP
Sbjct: 382 NEHGLILTNAHLLEPWRYGK----GGVYGEGFKPYVLGAEEFSSTGSKFWEQ--KSQTLP 435
Query: 469 PKMPKIVDSSVDEH-RAYKLSSFSRGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLL 527
K P+ SSV E+ R YK + GHR IRVRL HLD W WC A +VY+CK LD++LL
Sbjct: 436 RKAPRNHYSSVGENIREYKHNFLQTGHRDIRVRLCHLDSWTWCPANVVYICKEQLDIALL 495
Query: 528 QLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCGLSPSVSSGVVAKVVKANLPSYG 587
QL Y+P +L PI A+F P LG+ A+V+GHGLFGPRCGLSPS+ SGVVAKVV A
Sbjct: 496 QLEYVPGKLQPITANFSSPPLGTTAHVVGHGLFGPRCGLSPSICSGVVAKVVHAKRRLNT 555
Query: 588 QSTLQRNSAYPVMLETTAAVHPGGSGGAVVNLDGHMIGLVTRYA 631
QS Q + +P MLETTAAVHPGGSGGAV+N GHMIGLVT A
Sbjct: 556 QSISQEVAEFPAMLETTAAVHPGGSGGAVLNSSGHMIGLVTSNA 599
>sp|Q2T9J0|TYSD1_HUMAN Peroxisomal leader peptide-processing protease OS=Homo sapiens
GN=TYSND1 PE=1 SV=3
Length = 566
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 19/132 (14%)
Query: 202 EESSNLSLMSKSTSRVAILGVSSYLKDL-----PNIALTPLNK--RGDLLLAVGSPFGVL 254
EE+ L ++ A+LGV +++ P +A++PL +G LL GSPFG
Sbjct: 174 EEADQL----RALGWFALLGVRLGQEEVEEERGPAMAVSPLGAVPKGAPLLVCGSPFGAF 229
Query: 255 SPMHFFNSVSMGSVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEH--AHFVGILIRPL 312
P F N++S G ++N P LL+ D RCLPG EGG VF V +++ PL
Sbjct: 230 CPDIFLNTLSCGVLSNVAGP------LLLTDARCLPGTEGGGVFTARPAGALVALVVAPL 283
Query: 313 RQKSGAEIQLVI 324
K+G + +
Sbjct: 284 CWKAGEWVGFTL 295
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 21/124 (16%)
Query: 508 IWCDAKIVYVCK--GPLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCG 565
IW ++V+ + P D++++ L D + PI G A V+G G+FG CG
Sbjct: 393 IW--GRVVFATQETCPYDIAVVSLEEDLDDV-PIPVPAEHFHEGEAVSVVGFGVFGQSCG 449
Query: 566 LSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVV-NLDGHMI 624
PSV+SG+++ VV+ N PVML+TT AVH G SGG + N G+++
Sbjct: 450 --PSVTSGILSAVVQVN-------------GTPVMLQTTCAVHSGSSGGPLFSNHSGNLL 494
Query: 625 GLVT 628
G++T
Sbjct: 495 GIIT 498
>sp|Q9DBA6|TYSD1_MOUSE Peroxisomal leader peptide-processing protease OS=Mus musculus
GN=Tysnd1 PE=1 SV=1
Length = 568
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 221 GVSSYLKDLPNIALTPLNK--RGDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTT 278
G ++ + P + + PL +G LLA GSPFG P F N++S G ++N P
Sbjct: 195 GAAAEERRGPVVTVAPLGAVVKGAPLLACGSPFGAFCPDIFLNTLSRGVLSNAAGP---- 250
Query: 279 RSLLMADIRCLPGMEGGPVF 298
LL+ D RCLPG EGG VF
Sbjct: 251 --LLLTDARCLPGTEGGGVF 268
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 16/80 (20%)
Query: 549 GSAAYVIGHGLFGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVH 608
G V+G G+FG CG PSV+SG+++ VV+ + PVML+TT AVH
Sbjct: 435 GEPVSVVGFGVFGQACG--PSVTSGILSAVVRVD-------------GSPVMLQTTCAVH 479
Query: 609 PGGSGGAVVNL-DGHMIGLV 627
G SGG + + G ++G+V
Sbjct: 480 GGSSGGPLFSSGSGDLLGIV 499
>sp|P45129|HTOA_HAEIN Probable periplasmic serine protease do/HhoA-like OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=HI_1259 PE=3 SV=1
Length = 466
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 15/107 (14%)
Query: 523 DVSLLQLGYIPDQLCPID-ADFGQPSLGSAAYVIGHGLFGPRCGLSPSVSSGVVAKVVKA 581
D++L+QL P L I AD + +G IG+ GL +V+SG+V+
Sbjct: 150 DIALVQLEK-PSNLTEIKFADSDKLRVGDFTVAIGNPF-----GLGQTVTSGIVS----- 198
Query: 582 NLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNLDGHMIGLVT 628
+ G+ST + Y ++T AAV+ G SGGA+VNL+G +IG+ T
Sbjct: 199 ---ALGRSTGSDSGTYENYIQTDAAVNRGNSGGALVNLNGELIGINT 242
>sp|P0C0V0|DEGP_ECOLI Periplasmic serine endoprotease DegP OS=Escherichia coli (strain
K12) GN=degP PE=1 SV=1
Length = 474
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 511 DAKIVYVCKGPL-DVSLLQLGYIPDQLCPID-ADFGQPSLGSAAYVIGHGLFGPRCGLSP 568
DAK+V K P D++L+Q+ P L I AD +G IG+ GL
Sbjct: 150 DAKMV--GKDPRSDIALIQIQN-PKNLTAIKMADSDALRVGDYTVAIGNPF-----GLGE 201
Query: 569 SVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNLDGHMIGLVT 628
+V+SG+V+ + G+S L + Y ++T AA++ G SGGA+VNL+G +IG+ T
Sbjct: 202 TVTSGIVS--------ALGRSGLNAEN-YENFIQTDAAINRGNSGGALVNLNGELIGINT 252
>sp|P0C0V1|DEGP_ECO57 Periplasmic serine endoprotease DegP OS=Escherichia coli O157:H7
GN=degP PE=3 SV=1
Length = 474
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 511 DAKIVYVCKGPL-DVSLLQLGYIPDQLCPID-ADFGQPSLGSAAYVIGHGLFGPRCGLSP 568
DAK+V K P D++L+Q+ P L I AD +G IG+ GL
Sbjct: 150 DAKMV--GKDPRSDIALIQIQN-PKNLTAIKMADSDALRVGDYTVAIGNPF-----GLGE 201
Query: 569 SVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNLDGHMIGLVT 628
+V+SG+V+ + G+S L + Y ++T AA++ G SGGA+VNL+G +IG+ T
Sbjct: 202 TVTSGIVS--------ALGRSGLNAEN-YENFIQTDAAINRGNSGGALVNLNGELIGINT 252
>sp|P26982|DEGP_SALTY Periplasmic serine endoprotease DegP OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=degP PE=3 SV=1
Length = 475
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 19/120 (15%)
Query: 511 DAKIVYVCKGPL-DVSLLQLGYIPDQLCPID-ADFGQPSLGSAAYVIGHGLFGPRCGLSP 568
DAK+V K P D++L+Q+ P L I AD +G IG+ GL
Sbjct: 151 DAKVV--GKDPRSDIALIQIQN-PKNLTAIKLADSDALRVGDYTVAIGNPF-----GLGE 202
Query: 569 SVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNLDGHMIGLVT 628
+V+SG+V+ + G+S L + Y ++T AA++ G SGGA+VNL+G +IG+ T
Sbjct: 203 TVTSGIVS--------ALGRSGLNVEN-YENFIQTDAAINRGNSGGALVNLNGELIGINT 253
>sp|Q48EU9|DEGPL_PSE14 Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
GN=mucD PE=3 SV=1
Length = 479
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
+ S + VA+L + KDLP L N K G+ +LA+GSPFG F +SV+ G
Sbjct: 144 TDSRTDVAVLKIDG--KDLPTAKLGNSNTLKVGEWVLAIGSPFG------FDHSVTKGIV 195
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P T + D+ PG GGP+F VGI
Sbjct: 196 SAKGRSLPNDTYVPFIQTDVAINPGNSGGPLFNMAGEVVGI 236
Score = 34.3 bits (77), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 13/78 (16%)
Query: 560 FGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNL 619
G G SV+ G+V+ ++ LP N Y ++T A++PG SGG + N+
Sbjct: 180 IGSPFGFDHSVTKGIVSAKGRS-LP---------NDTYVPFIQTDVAINPGNSGGPLFNM 229
Query: 620 DGHMIGLVTRY---AGGF 634
G ++G+ ++ +GGF
Sbjct: 230 AGEVVGINSQIFTRSGGF 247
>sp|P57322|DEGP_BUCAI Probable serine protease do-like OS=Buchnera aphidicola subsp.
Acyrthosiphon pisum (strain APS) GN=degP PE=3 SV=1
Length = 478
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 16/107 (14%)
Query: 523 DVSLLQLGYIPDQLCPID-ADFGQPSLGSAAYVIGHGLFGPRCGLSPSVSSGVVAKVVKA 581
D++L+QL + L I AD +G IG+ GL +V+SG+++
Sbjct: 163 DIALIQLKN-ANNLSEIKIADSDNLRVGDYTVAIGNPY-----GLGETVTSGIIS----- 211
Query: 582 NLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNLDGHMIGLVT 628
+ G+S L Y ++T AA++ G SGGA+VNL G +IG+ T
Sbjct: 212 ---ALGRSGLNI-EHYENFIQTDAAINRGNSGGALVNLKGELIGINT 254
>sp|B1J4D7|DEGPL_PSEPW Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
putida (strain W619) GN=PputW619_1070 PE=3 SV=1
Length = 479
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V K+LP + L K G+ +LA+GSPFG F +SV+ G S
Sbjct: 148 VALLKVDG--KNLPTVKLGDSEKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRT 199
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F + VGI
Sbjct: 200 LPNDTYVPFIQTDVAINPGNSGGPLFNMNGEVVGI 234
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 13/78 (16%)
Query: 560 FGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNL 619
G G SV+ G+V+ + LP N Y ++T A++PG SGG + N+
Sbjct: 178 IGSPFGFDHSVTKGIVSAKGR-TLP---------NDTYVPFIQTDVAINPGNSGGPLFNM 227
Query: 620 DGHMIGLVTRY---AGGF 634
+G ++G+ ++ +GGF
Sbjct: 228 NGEVVGINSQIFTRSGGF 245
>sp|O85291|DEGPL_BUCAP Probable periplasmic serine endoprotease DegP-like OS=Buchnera
aphidicola subsp. Schizaphis graminum (strain Sg)
GN=htrA PE=3 SV=1
Length = 478
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 523 DVSLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCGLSPSVSSGVVAKVVKAN 582
D++L+QL + AD +G IG+ GL +V+SG+++
Sbjct: 163 DIALIQLKNAKNLSAIKIADSDTLRVGDYTVAIGN-----PYGLGETVTSGIIS------ 211
Query: 583 LPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNLDGHMIGLVT 628
+ G+S L Y ++T AA++ G SGGA+VNL G +IG+ T
Sbjct: 212 --ALGRSGLNI-EHYENFIQTDAAINRGNSGGALVNLKGELIGINT 254
>sp|A5W8F5|DEGPL_PSEP1 Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
putida (strain F1 / ATCC 700007) GN=Pput_4291 PE=3 SV=1
Length = 477
Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V K+LP + L K G+ +LA+GSPFG F +SV+ G S
Sbjct: 148 VALLKVDG--KNLPTVKLGDSEKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRT 199
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 200 LPNDTYVPFIQTDVAINPGNSGGPLFNMKGEVVGI 234
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 13/78 (16%)
Query: 560 FGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNL 619
G G SV+ G+V+ + LP N Y ++T A++PG SGG + N+
Sbjct: 178 IGSPFGFDHSVTKGIVSAKGR-TLP---------NDTYVPFIQTDVAINPGNSGGPLFNM 227
Query: 620 DGHMIGL---VTRYAGGF 634
G ++G+ + +GGF
Sbjct: 228 KGEVVGINSQIFTRSGGF 245
>sp|Q89AP5|DEGPL_BUCBP Probable periplasmic serine endoprotease DegP-like OS=Buchnera
aphidicola subsp. Baizongia pistaciae (strain Bp)
GN=htrA PE=3 SV=1
Length = 465
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 24/136 (17%)
Query: 496 KIRVRLDHLDPWIWCDAKIVYVCK-GPLDVSLLQLGYIPD--QLCPIDADFGQPSLGSAA 552
KI+V+L + C + V + K D+++++L + + ++ ++D L
Sbjct: 126 KIQVQLSN-----GCKHEAVVIGKDARFDIAIIKLKKVKNLHEIKMSNSDI----LKVGD 176
Query: 553 YVIGHGLFGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGS 612
YVI G GL +V+SG+++ + ++ L Y ++T AA++ G S
Sbjct: 177 YVIA---IGNPYGLGETVTSGIISALHRSGLNI---------ENYENFIQTDAAINRGNS 224
Query: 613 GGAVVNLDGHMIGLVT 628
GGA+VNL G +IG+ T
Sbjct: 225 GGALVNLKGELIGINT 240
>sp|P39099|DEGQ_ECOLI Periplasmic pH-dependent serine endoprotease DegQ OS=Escherichia
coli (strain K12) GN=degQ PE=1 SV=1
Length = 455
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 97/196 (49%), Gaps = 29/196 (14%)
Query: 443 VSFQPEDSASSGHTGVDQYQK--SQTLP--PKMP-KIVDSSV--DEHRAYKLSS--FSRG 493
VS + E +AS G ++++K LP P P + + S V + + Y L++
Sbjct: 54 VSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQ 113
Query: 494 HRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLLQLGYIPDQLCPID-ADFGQPSLGSAA 552
+KI ++L+ + DAK++ D++LLQ+ P +L I AD + +G A
Sbjct: 114 AQKISIQLNDGREF---DAKLIG-SDDQSDIALLQIQN-PSKLTQIAIADSDKLRVGDFA 168
Query: 553 YVIGHGLFGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGS 612
+G+ GL + +SG+V+ + ++ L G ++T A+++ G S
Sbjct: 169 VAVGNPF-----GLGQTATSGIVSALGRSGLNLEGLENF---------IQTDASINRGNS 214
Query: 613 GGAVVNLDGHMIGLVT 628
GGA++NL+G +IG+ T
Sbjct: 215 GGALLNLNGELIGINT 230
>sp|F6AA62|DEGPL_PSEF1 Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
fulva (strain 12-X) GN=Psefu_3239 PE=3 SV=1
Length = 479
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L V + DLP + L + K G+ +LA+GSPFG F +SV+ G S
Sbjct: 147 SDVALLKVEA--NDLPTVKLGNSDNLKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 198
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+F VGI
Sbjct: 199 RSLPNESYVPFIQTDVAINPGNSGGPLFNLDGEVVGI 235
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 13/78 (16%)
Query: 560 FGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNL 619
G G SV++G+V+ ++ LP N +Y ++T A++PG SGG + NL
Sbjct: 179 IGSPFGFDHSVTAGIVSAKGRS-LP---------NESYVPFIQTDVAINPGNSGGPLFNL 228
Query: 620 DGHMIGLVTRY---AGGF 634
DG ++G+ ++ +GGF
Sbjct: 229 DGEVVGINSQIFTRSGGF 246
>sp|Q4L530|HTRAL_STAHJ Serine protease HtrA-like OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=SH1936 PE=3 SV=1
Length = 639
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 523 DVSLLQLGYIPDQLCPIDADFGQP-SLGSAAYVIGHGLFGPRCGLSPSVSSGVVAKVVKA 581
D+++L+ + PI + LG + V+G+ L +V+ G+++ + +A
Sbjct: 404 DIAVLKATIKNKNMQPIKIGHSKHLKLGESILVVGNPLGN---DFKNTVTKGIISGLNRA 460
Query: 582 NLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNLDGHMIGLVT 628
+ + +N + + A+V+PG SGGAVVN G ++GLV+
Sbjct: 461 VPVDFDKDN--KNDEWVNTFQIDASVNPGNSGGAVVNRVGELVGLVS 505
>sp|E1V4H2|DEGPL_HALED Probable periplasmic serine endoprotease DegP-like OS=Halomonas
elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 /
NCIMB 2198 / 1H9) GN=mucD PE=3 SV=1
Length = 474
Score = 41.2 bits (95), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 13/78 (16%)
Query: 560 FGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNL 619
G GL SV+SG+++ + + TL R+ P ++T A++PG SGG + NL
Sbjct: 177 IGSPFGLDHSVTSGIISAINR---------TLPRDVYVP-FIQTDVAINPGNSGGPLFNL 226
Query: 620 DGHMIGL---VTRYAGGF 634
DG +IG+ + +GG+
Sbjct: 227 DGEVIGINSQIFTRSGGY 244
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
+ + + VA+L V + +LP + L K G + A+GSPFG +SV+ G
Sbjct: 141 ADTKTDVAVLKVDA--DNLPTLTLGDSEDLKVGQWVAAIGSPFG------LDHSVTSGII 192
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S N PR + D+ PG GGP+F +GI
Sbjct: 193 SAINRTLPRDVYVPFIQTDVAINPGNSGGPLFNLDGEVIGI 233
>sp|B0KV30|DEGPL_PSEPG Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
putida (strain GB-1) GN=PputGB1_4377 PE=3 SV=1
Length = 477
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 217 VAILGVSSYLKDLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMG--SVANCY 272
VA+L V K+LP + L K G+ +LA+GSPFG F +SV+ G S
Sbjct: 148 VALLKVEG--KNLPIVKLGDSEKLKVGEWVLAIGSPFG------FDHSVTKGIVSAKGRT 199
Query: 273 PPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P T + D+ PG GGP+F VGI
Sbjct: 200 LPNDTYVPFIQTDVAINPGNSGGPLFNMKGEVVGI 234
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 13/78 (16%)
Query: 560 FGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNL 619
G G SV+ G+V+ + LP N Y ++T A++PG SGG + N+
Sbjct: 178 IGSPFGFDHSVTKGIVSAKGR-TLP---------NDTYVPFIQTDVAINPGNSGGPLFNM 227
Query: 620 DGHMIGL---VTRYAGGF 634
G ++G+ + +GGF
Sbjct: 228 KGEVVGINSQIFTRSGGF 245
>sp|Q8CT52|HTRAL_STAES Serine protease HtrA-like OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=SE_0722/SE_0723 PE=3 SV=2
Length = 585
Score = 40.4 bits (93), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 523 DVSLLQLGYIPDQLCPID-ADFGQPSLGSAAYVIGHGLFGPRCGLSPSVSSGVVAKVVKA 581
D+++++ + + P+ D L VIG+ L SVS G+V+
Sbjct: 350 DLAVVKAKVADENIKPMTMGDSNNIKLAEPILVIGNPLG---TDFKGSVSQGIVS----- 401
Query: 582 NLPSYGQSTLQRNSAYPVML---ETTAAVHPGGSGGAVVNLDGHMIGLVT 628
L + + +N Y ++ + A V+PG SGGAVV+ DG +IG+V+
Sbjct: 402 GLNRHVPVDIDKNDNYDALMKAFQIDAPVNPGNSGGAVVDRDGRLIGIVS 451
>sp|Q5HQE2|HTRAL_STAEQ Serine protease HtrA-like OS=Staphylococcus epidermidis (strain
ATCC 35984 / RP62A) GN=SERP0611 PE=3 SV=1
Length = 585
Score = 40.4 bits (93), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 12/110 (10%)
Query: 523 DVSLLQLGYIPDQLCPID-ADFGQPSLGSAAYVIGHGLFGPRCGLSPSVSSGVVAKVVKA 581
D+++++ + + P+ D L VIG+ L SVS G+V+
Sbjct: 350 DLAVVKAKVADENIKPMTMGDSNNIKLAEPILVIGNPLG---TDFKGSVSQGIVS----- 401
Query: 582 NLPSYGQSTLQRNSAYPVML---ETTAAVHPGGSGGAVVNLDGHMIGLVT 628
L + + +N Y ++ + A V+PG SGGAVV+ DG +IG+V+
Sbjct: 402 GLNRHVPVDIDKNDNYDALMKAFQIDAPVNPGNSGGAVVDRDGRLIGIVS 451
>sp|A4XSC0|DEGPL_PSEMY Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
mendocina (strain ymp) GN=Pmen_1471 PE=3 SV=1
Length = 474
Score = 40.0 bits (92), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMG--SVAN 270
S VA+L V K LP + L + K G+ +LA+GSPFG F +SV+ G S
Sbjct: 142 SDVALLKVEG--KGLPTVRLGKSDELKVGEWVLAIGSPFG------FDHSVTAGIVSAKG 193
Query: 271 CYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + + D+ PG GGP+F VGI
Sbjct: 194 RNLPSDSYVPFIQTDVAINPGNSGGPLFNLKGEVVGI 230
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 13/78 (16%)
Query: 560 FGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNL 619
G G SV++G+V+ + NLPS +Y ++T A++PG SGG + NL
Sbjct: 174 IGSPFGFDHSVTAGIVSAKGR-NLPS---------DSYVPFIQTDVAINPGNSGGPLFNL 223
Query: 620 DGHMIGL---VTRYAGGF 634
G ++G+ + +GGF
Sbjct: 224 KGEVVGINSQIFTRSGGF 241
>sp|Q7A6C9|HTRAL_STAAN Serine protease HtrA-like OS=Staphylococcus aureus (strain N315)
GN=SA0879 PE=1 SV=1
Length = 769
Score = 39.7 bits (91), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 509 WCDAKIVYVCKGPLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCGLSP 568
W D +V V + +G D LG V+G+ L
Sbjct: 532 WSDLAVVKATSSDSSVKEIAIG-----------DSNNLVLGEPILVVGNPLG---VDFKG 577
Query: 569 SVSSGVVAKVVKANLPSYGQSTLQRNSAYPVML---ETTAAVHPGGSGGAVVNLDGHMIG 625
+V+ G+++ + + N+P +++ Y +++ + A+V+PG SGGAVVN +G +IG
Sbjct: 578 TVTEGIISGLNR-NVPI----DFDKDNKYDMLMKAFQIDASVNPGNSGGAVVNREGKLIG 632
Query: 626 LV 627
+V
Sbjct: 633 VV 634
>sp|Q99V70|HTRAL_STAAM Serine protease HtrA-like OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=SAV1023 PE=3 SV=1
Length = 769
Score = 39.7 bits (91), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 509 WCDAKIVYVCKGPLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCGLSP 568
W D +V V + +G D LG V+G+ L
Sbjct: 532 WSDLAVVKATSSDSSVKEIAIG-----------DSNNLVLGEPILVVGNPLG---VDFKG 577
Query: 569 SVSSGVVAKVVKANLPSYGQSTLQRNSAYPVML---ETTAAVHPGGSGGAVVNLDGHMIG 625
+V+ G+++ + + N+P +++ Y +++ + A+V+PG SGGAVVN +G +IG
Sbjct: 578 TVTEGIISGLNR-NVPI----DFDKDNKYDMLMKAFQIDASVNPGNSGGAVVNREGKLIG 632
Query: 626 LV 627
+V
Sbjct: 633 VV 634
>sp|Q2FZP2|HTRAL_STAA8 Serine protease HtrA-like OS=Staphylococcus aureus (strain NCTC
8325) GN=SAOUHSC_00958 PE=3 SV=2
Length = 769
Score = 39.7 bits (91), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 509 WCDAKIVYVCKGPLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCGLSP 568
W D +V V + +G D LG V+G+ L
Sbjct: 532 WSDLAVVKATSSDSSVKEIAIG-----------DSNNLVLGEPILVVGNPLG---VDFKG 577
Query: 569 SVSSGVVAKVVKANLPSYGQSTLQRNSAYPVML---ETTAAVHPGGSGGAVVNLDGHMIG 625
+V+ G+++ + + N+P +++ Y +++ + A+V+PG SGGAVVN +G +IG
Sbjct: 578 TVTEGIISGLNR-NVPI----DFDKDNKYDMLMKAFQIDASVNPGNSGGAVVNREGKLIG 632
Query: 626 LV 627
+V
Sbjct: 633 VV 634
>sp|Q8NXB8|HTRAL_STAAW Serine protease HtrA-like OS=Staphylococcus aureus (strain MW2)
GN=MW0903 PE=3 SV=1
Length = 769
Score = 39.7 bits (91), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 509 WCDAKIVYVCKGPLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCGLSP 568
W D +V V + +G D LG V+G+ L
Sbjct: 532 WSDLAVVKATSSDSSVKEIAIG-----------DSNNLVLGEPILVVGNPLG---VDFKG 577
Query: 569 SVSSGVVAKVVKANLPSYGQSTLQRNSAYPVML---ETTAAVHPGGSGGAVVNLDGHMIG 625
+V+ G+++ + + N+P +++ Y +++ + A+V+PG SGGAVVN +G +IG
Sbjct: 578 TVTEGIISGLNR-NVPI----DFDKDNKYDMLMKAFQIDASVNPGNSGGAVVNREGKLIG 632
Query: 626 LV 627
+V
Sbjct: 633 VV 634
>sp|Q6GAJ1|HTRAL_STAAS Serine protease HtrA-like OS=Staphylococcus aureus (strain MSSA476)
GN=SAS0955 PE=3 SV=1
Length = 769
Score = 39.7 bits (91), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 509 WCDAKIVYVCKGPLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCGLSP 568
W D +V V + +G D LG V+G+ L
Sbjct: 532 WSDLAVVKATSSDSSVKEIAIG-----------DSNNLVLGEPILVVGNPLG---VDFKG 577
Query: 569 SVSSGVVAKVVKANLPSYGQSTLQRNSAYPVML---ETTAAVHPGGSGGAVVNLDGHMIG 625
+V+ G+++ + + N+P +++ Y +++ + A+V+PG SGGAVVN +G +IG
Sbjct: 578 TVTEGIISGLNR-NVPI----DFDKDNKYDMLMKAFQIDASVNPGNSGGAVVNREGKLIG 632
Query: 626 LV 627
+V
Sbjct: 633 VV 634
>sp|Q6GI62|HTRAL_STAAR Serine protease HtrA-like OS=Staphylococcus aureus (strain MRSA252)
GN=SAR0992 PE=3 SV=1
Length = 769
Score = 39.7 bits (91), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 509 WCDAKIVYVCKGPLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCGLSP 568
W D +V V + +G D LG V+G+ L
Sbjct: 532 WSDLAVVKATSSDSSVKEIAIG-----------DSNNLVLGEPILVVGNPLG---VDFKG 577
Query: 569 SVSSGVVAKVVKANLPSYGQSTLQRNSAYPVML---ETTAAVHPGGSGGAVVNLDGHMIG 625
+V+ G+++ + + N+P +++ Y +++ + A+V+PG SGGAVVN +G +IG
Sbjct: 578 TVTEGIISGLNR-NVPI----DFDKDNKYDMLMKAFQIDASVNPGNSGGAVVNREGKLIG 632
Query: 626 LV 627
+V
Sbjct: 633 VV 634
>sp|Q5HH63|HTRAL_STAAC Serine protease HtrA-like OS=Staphylococcus aureus (strain COL)
GN=SACOL1028 PE=3 SV=1
Length = 769
Score = 39.7 bits (91), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 509 WCDAKIVYVCKGPLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCGLSP 568
W D +V V + +G D LG V+G+ L
Sbjct: 532 WSDLAVVKATSSDSSVKEIAIG-----------DSNNLVLGEPILVVGNPLG---VDFKG 577
Query: 569 SVSSGVVAKVVKANLPSYGQSTLQRNSAYPVML---ETTAAVHPGGSGGAVVNLDGHMIG 625
+V+ G+++ + + N+P +++ Y +++ + A+V+PG SGGAVVN +G +IG
Sbjct: 578 TVTEGIISGLNR-NVPI----DFDKDNKYDMLMKAFQIDASVNPGNSGGAVVNREGKLIG 632
Query: 626 LV 627
+V
Sbjct: 633 VV 634
>sp|Q2FI55|HTRAL_STAA3 Serine protease HtrA-like OS=Staphylococcus aureus (strain USA300)
GN=SAUSA300_0923 PE=3 SV=1
Length = 769
Score = 39.7 bits (91), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 509 WCDAKIVYVCKGPLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCGLSP 568
W D +V V + +G D LG V+G+ L
Sbjct: 532 WSDLAVVKATSSDSSVKEIAIG-----------DSNNLVLGEPILVVGNPLG---VDFKG 577
Query: 569 SVSSGVVAKVVKANLPSYGQSTLQRNSAYPVML---ETTAAVHPGGSGGAVVNLDGHMIG 625
+V+ G+++ + + N+P +++ Y +++ + A+V+PG SGGAVVN +G +IG
Sbjct: 578 TVTEGIISGLNR-NVPI----DFDKDNKYDMLMKAFQIDASVNPGNSGGAVVNREGKLIG 632
Query: 626 LV 627
+V
Sbjct: 633 VV 634
>sp|P39668|YYXA_BACSU Uncharacterized serine protease YyxA OS=Bacillus subtilis (strain
168) GN=yyxA PE=3 SV=2
Length = 400
Score = 39.3 bits (90), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 13/109 (11%)
Query: 522 LDVSLLQLGYIPDQLCPIDADFGQPSL---GSAAYVIGHGLFGPRCGLSPSVSSGVVAKV 578
+D+++L++ D++ + ADFG G IG+ L G SV+ GV++
Sbjct: 158 MDLAVLRVK--SDKIKAV-ADFGNSDKVKSGEPVIAIGNPLGLEFAG---SVTQGVISGT 211
Query: 579 VKAN-LPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNLDGHMIGL 626
+A + S G N+ +L+T AA++PG SGGA++N+DG +IG+
Sbjct: 212 ERAIPVDSNGDGQPDWNAE---VLQTDAAINPGNSGGALLNMDGKVIGI 257
>sp|Q2YX06|HTRAL_STAAB Serine protease HtrA-like OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=SAB0888 PE=3 SV=1
Length = 769
Score = 39.3 bits (90), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 22/122 (18%)
Query: 509 WCDAKIVYVCKGPLDVSLLQLGYIPDQLCPIDADFGQPSLGSAAYVIGHGLFGPRCGLSP 568
W D +V V + +G D LG V+G+ L
Sbjct: 532 WSDLAVVKATSSDSSVKEIAIG-----------DSNNLVLGEPILVVGNPLG---VDFKG 577
Query: 569 SVSSGVVAKVVKANLPSYGQSTLQRNSAYPVML---ETTAAVHPGGSGGAVVNLDGHMIG 625
+V+ G+++ + + L + +++ Y +++ + A+V+PG SGGAVVN +G +IG
Sbjct: 578 TVTEGIISGLNRNVLIDFD-----KDNKYDMLMKAFQIDASVNPGNSGGAVVNREGKLIG 632
Query: 626 LV 627
+V
Sbjct: 633 VV 634
>sp|O34358|HTRA_BACSU Serine protease Do-like HtrA OS=Bacillus subtilis (strain 168)
GN=htrA PE=2 SV=2
Length = 449
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 18/109 (16%)
Query: 523 DVSLLQLGYIPDQLCPIDADFGQPS---LGSAAYVIGHGLFGPRCGLSPSVSSGVVAKVV 579
D+++LQ+ D + + A+FG S G IG L LS +V+ G+V+ V
Sbjct: 209 DLAVLQIS--DDHVTKV-ANFGDSSDLRTGETVIAIGDPLGKD---LSRTVTQGIVSGVD 262
Query: 580 K--ANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNLDGHMIGL 626
+ + S G++++ +++T AA++PG SGG ++N DG ++G+
Sbjct: 263 RTVSMSTSAGETSIN-------VIQTDAAINPGNSGGPLLNTDGKIVGI 304
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 4/133 (3%)
Query: 211 SKSTSRVAILGVSS-YLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG--- 266
S S + +A+L +S ++ + N + + G+ ++A+G P G + G
Sbjct: 204 SDSLTDLAVLQISDDHVTKVANFGDSSDLRTGETVIAIGDPLGKDLSRTVTQGIVSGVDR 263
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGILIRPLRQKSGAEIQLVIPW 326
+V+ T+ +++ D PG GGP+ VGI + + I IP
Sbjct: 264 TVSMSTSAGETSINVIQTDAAINPGNSGGPLLNTDGKIVGINSMKISEDDVEGIGFAIPS 323
Query: 327 EAIATACSDLLLK 339
+ +LL K
Sbjct: 324 NDVKPIAEELLSK 336
>sp|Q2SL36|DEGPL_HAHCH Probable periplasmic serine endoprotease DegP-like OS=Hahella
chejuensis (strain KCTC 2396) GN=mucD PE=3 SV=1
Length = 469
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 12/101 (11%)
Query: 211 SKSTSRVAILGVSSYLKDLP--NIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG-- 266
S S +A+L V + DLP N+ + K G+ ++A+GSPFG F +V+ G
Sbjct: 133 SDEKSDLAVLKVEA--DDLPVLNLGKSSELKVGEWVVAIGSPFG------FEYTVTAGIV 184
Query: 267 SVANCYPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
S P + D+ PG GGP+F VGI
Sbjct: 185 SAKGRSLPNENYVPFIQTDVAINPGNSGGPLFNLEGEVVGI 225
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 13/78 (16%)
Query: 560 FGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNL 619
G G +V++G+V+ ++ LP N Y ++T A++PG SGG + NL
Sbjct: 169 IGSPFGFEYTVTAGIVSAKGRS-LP---------NENYVPFIQTDVAINPGNSGGPLFNL 218
Query: 620 DGHMIGL---VTRYAGGF 634
+G ++G+ + +GGF
Sbjct: 219 EGEVVGINSQIYTRSGGF 236
>sp|O22609|DEGP1_ARATH Protease Do-like 1, chloroplastic OS=Arabidopsis thaliana GN=DEGP1
PE=1 SV=2
Length = 439
Score = 38.1 bits (87), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 71/139 (51%), Gaps = 18/139 (12%)
Query: 492 RGHRKIRVRLDHLDPWIWCDAKIVYVCKGPLDVSLLQLGYIPDQLCPIDADFGQPSLGSA 551
RG +RV L + DAK+V + DV++L++ ++L PI P SA
Sbjct: 176 RGASDLRVTLADQTTF---DAKVVGFDQDK-DVAVLRIDAPKNKLRPI------PVGVSA 225
Query: 552 AYVIGHGLF--GPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHP 609
++G +F G GL ++++GV++ + + + +Q +++T AA++P
Sbjct: 226 DLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQD------VIQTDAAINP 279
Query: 610 GGSGGAVVNLDGHMIGLVT 628
G SGG +++ G +IG+ T
Sbjct: 280 GNSGGPLLDSSGTLIGINT 298
>sp|A6VUA4|DEGPL_MARMS Probable periplasmic serine endoprotease DegP-like OS=Marinomonas
sp. (strain MWYL1) GN=Mmwyl1_1102 PE=3 SV=1
Length = 469
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 13/78 (16%)
Query: 560 FGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNL 619
G G +V++G+V+ ++ LPS Y ++T A++PG SGG + NL
Sbjct: 175 IGSPFGFDYTVTAGIVSATGRS-LPS---------DNYVPFIQTDVAINPGNSGGPLFNL 224
Query: 620 DGHMIGL---VTRYAGGF 634
DG ++G+ + +GGF
Sbjct: 225 DGEVVGINSQIYTRSGGF 242
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 22/90 (24%)
Query: 228 DLPNIALTPLNKR--GDLLLAVGSPFGVLSPMHFFNSVSMGSVANCYPPRSTTRSL---- 281
DLP + + +K G +LA+GSPFG F +V+ G V+ +T RSL
Sbjct: 154 DLPIVKMGDSDKLKPGQWVLAIGSPFG------FDYTVTAGIVS------ATGRSLPSDN 201
Query: 282 ----LMADIRCLPGMEGGPVFGEHAHFVGI 307
+ D+ PG GGP+F VGI
Sbjct: 202 YVPFIQTDVAINPGNSGGPLFNLDGEVVGI 231
>sp|Q4KGQ4|DEGPL_PSEF5 Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=mucD PE=1
SV=1
Length = 476
Score = 37.7 bits (86), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 215 SRVAILGVSSYLKDLPNIALTPLN--KRGDLLLAVGSPFGVLSPMHFFNSVSMGSVANC- 271
S VA+L + KDLP + L K G ++A+GSPFG F ++V+ G V+
Sbjct: 145 SDVALLKIDG--KDLPVLKLGKSQDLKAGQWVVAIGSPFG------FDHTVTQGIVSAIG 196
Query: 272 -YPPRSTTRSLLMADIRCLPGMEGGPVFGEHAHFVGI 307
P + D+ PG GGP+F VGI
Sbjct: 197 RSLPNENYVPFIQTDVPINPGNSGGPLFNLAGEVVGI 233
Score = 33.9 bits (76), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 13/78 (16%)
Query: 560 FGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNL 619
G G +V+ G+V+ + ++ LP N Y ++T ++PG SGG + NL
Sbjct: 177 IGSPFGFDHTVTQGIVSAIGRS-LP---------NENYVPFIQTDVPINPGNSGGPLFNL 226
Query: 620 DGHMIGL---VTRYAGGF 634
G ++G+ + +GGF
Sbjct: 227 AGEVVGINSQIYTRSGGF 244
>sp|Q9LA06|HTRA_LACLA Serine protease Do-like HtrA OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=htrA PE=1 SV=1
Length = 408
Score = 37.7 bits (86), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 23/26 (88%)
Query: 601 LETTAAVHPGGSGGAVVNLDGHMIGL 626
++T AA++PG SGGA++N++G +IG+
Sbjct: 228 IQTDAAINPGNSGGALINIEGQVIGI 253
>sp|Q9R9I1|HTRB_BACSU Serine protease Do-like HtrB OS=Bacillus subtilis (strain 168)
GN=htrB PE=2 SV=1
Length = 458
Score = 37.4 bits (85), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 541 ADFGQPS---LGSAAYVIGHGLFGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAY 597
A FG S G IG+ L G +V+ G+++ + + Q T++ N
Sbjct: 232 ASFGDSSQLRTGEKVIAIGNPLGQQFSG---TVTQGIISGLNRTIDVDTTQGTVEMN--- 285
Query: 598 PVMLETTAAVHPGGSGGAVVNLDGHMIGL 626
+L+T AA++PG SGG ++N G +IG+
Sbjct: 286 --VLQTDAAINPGNSGGPLINASGQVIGI 312
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 23/108 (21%)
Query: 207 LSLMSKSTSRVAILGVSSYLKDLPNIALTPLNKRGDLLLAVGSPFGVLSPMHFFNSVSMG 266
L + K+ +VA G SS L+ G+ ++A+G+P G F +V+ G
Sbjct: 221 LEISGKNVKKVASFGDSSQLR------------TGEKVIAIGNPLG----QQFSGTVTQG 264
Query: 267 SVA--NCYPPRSTTR-----SLLMADIRCLPGMEGGPVFGEHAHFVGI 307
++ N TT+ ++L D PG GGP+ +GI
Sbjct: 265 IISGLNRTIDVDTTQGTVEMNVLQTDAAINPGNSGGPLINASGQVIGI 312
>sp|A2RNT9|HTRA_LACLM Serine protease Do-like HtrA OS=Lactococcus lactis subsp. cremoris
(strain MG1363) GN=htrA PE=3 SV=1
Length = 407
Score = 37.4 bits (85), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 23/26 (88%)
Query: 601 LETTAAVHPGGSGGAVVNLDGHMIGL 626
++T AA++PG SGGA++N++G +IG+
Sbjct: 227 IQTDAAINPGNSGGALINIEGQVIGI 252
>sp|Q9Z6T0|DEGPL_CHLPN Probable periplasmic serine endoprotease DegP-like OS=Chlamydia
pneumoniae GN=htrA PE=3 SV=1
Length = 488
Score = 37.4 bits (85), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 9/69 (13%)
Query: 560 FGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNL 619
G GL +V+ GV++ + G++ L + + ++T AA++PG SGG ++N+
Sbjct: 195 IGNPFGLQATVTVGVIS--------AKGRNQLHI-ADFEDFIQTDAAINPGNSGGPLLNI 245
Query: 620 DGHMIGLVT 628
DG +IG+ T
Sbjct: 246 DGQVIGVNT 254
>sp|Q9JIY5|HTRA2_MOUSE Serine protease HTRA2, mitochondrial OS=Mus musculus GN=Htra2 PE=1
SV=2
Length = 458
Score = 37.4 bits (85), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 560 FGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNL 619
G L +++SG+V+ A P+ Q N Y ++T AA+ G SGG +VNL
Sbjct: 260 MGSPFALQNTITSGIVSS---AQRPARDLGLPQNNVEY---IQTDAAIDFGNSGGPLVNL 313
Query: 620 DGHMIGLVT 628
DG +IG+ T
Sbjct: 314 DGEVIGVNT 322
>sp|O43464|HTRA2_HUMAN Serine protease HTRA2, mitochondrial OS=Homo sapiens GN=HTRA2 PE=1
SV=2
Length = 458
Score = 36.6 bits (83), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 560 FGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNL 619
G L +++SG+V+ A P+ Q N Y ++T AA+ G SGG +VNL
Sbjct: 260 MGSPFALQNTITSGIVSS---AQRPARDLGLPQTNVEY---IQTDAAIDFGNSGGPLVNL 313
Query: 620 DGHMIGLVT 628
DG +IG+ T
Sbjct: 314 DGEVIGVNT 322
>sp|B4JTT7|HTRA2_DROGR Serine protease HTRA2, mitochondrial OS=Drosophila grimshawi
GN=HtrA2 PE=3 SV=1
Length = 426
Score = 36.6 bits (83), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 547 SLGSAAYVIGHGLFGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAA 606
+L S +V+ G LS +V++GV++ +A S R+ Y L+T AA
Sbjct: 214 TLRSGEWVVA---LGSPLALSNTVTAGVISSTQRA---SQELGLRNRDINY---LQTDAA 264
Query: 607 VHPGGSGGAVVNLDGHMIGL 626
+ G SGG +VNLDG IG+
Sbjct: 265 ITFGNSGGPLVNLDGEAIGV 284
>sp|Q9PL97|DEGPL_CHLMU Probable periplasmic serine endoprotease DegP-like OS=Chlamydia
muridarum (strain MoPn / Nigg) GN=htrA PE=3 SV=1
Length = 497
Score = 36.6 bits (83), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 23/29 (79%)
Query: 600 MLETTAAVHPGGSGGAVVNLDGHMIGLVT 628
++T AA++PG SGG ++N+DG +IG+ T
Sbjct: 235 FIQTDAAINPGNSGGPLLNIDGQVIGVNT 263
>sp|B4N937|HTRA2_DROWI Serine protease HTRA2, mitochondrial OS=Drosophila willistoni
GN=HtrA2 PE=3 SV=1
Length = 434
Score = 36.2 bits (82), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 547 SLGSAAYVIGHGLFGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAA 606
+L S +V+ G LS +V++GV++ +A S R+ Y L+T AA
Sbjct: 222 TLRSGEWVVA---LGSPLALSNTVTAGVISSTQRA---SQELGLRNRDINY---LQTDAA 272
Query: 607 VHPGGSGGAVVNLDGHMIGL 626
+ G SGG +VNLDG IG+
Sbjct: 273 ITFGNSGGPLVNLDGEAIGV 292
>sp|B3LVG7|HTRA2_DROAN Serine protease HTRA2, mitochondrial OS=Drosophila ananassae
GN=HtrA2 PE=3 SV=1
Length = 426
Score = 36.2 bits (82), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 547 SLGSAAYVIGHGLFGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAA 606
+L S +V+ G LS +V++GV++ +A S R+ Y L+T AA
Sbjct: 214 TLRSGEWVVA---LGSPLALSNTVTAGVISSTQRA---SQELGLRNRDINY---LQTDAA 264
Query: 607 VHPGGSGGAVVNLDGHMIGL 626
+ G SGG +VNLDG IG+
Sbjct: 265 ITFGNSGGPLVNLDGEAIGV 284
>sp|A0JNK3|HTRA2_BOVIN Serine protease HTRA2, mitochondrial OS=Bos taurus GN=HTRA2 PE=2
SV=1
Length = 458
Score = 36.2 bits (82), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 566 LSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAAVHPGGSGGAVVNLDGHMIG 625
L +++SG+V+ A P+ Q N Y ++T AA+ G SGG +VNLDG +IG
Sbjct: 266 LQNTITSGIVSS---AQRPAKDLGLPQTNVEY---IQTDAAIDFGNSGGPLVNLDGEVIG 319
Query: 626 LVT 628
+ T
Sbjct: 320 VNT 322
>sp|Q9VFJ3|HTRA2_DROME Serine protease HTRA2, mitochondrial OS=Drosophila melanogaster
GN=HtrA2 PE=1 SV=1
Length = 422
Score = 36.2 bits (82), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 547 SLGSAAYVIGHGLFGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAA 606
+L S +V+ G LS +V++GV++ +A S R+ Y L+T AA
Sbjct: 210 TLRSGEWVVA---LGSPLALSNTVTAGVISSTQRA---SQELGLRNRDINY---LQTDAA 260
Query: 607 VHPGGSGGAVVNLDGHMIGL 626
+ G SGG +VNLDG IG+
Sbjct: 261 ITFGNSGGPLVNLDGEAIGV 280
>sp|B4K835|HTRA2_DROMO Serine protease HTRA2, mitochondrial OS=Drosophila mojavensis
GN=HtrA2 PE=3 SV=1
Length = 430
Score = 36.2 bits (82), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 547 SLGSAAYVIGHGLFGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAA 606
+L S +V+ G LS +V++GV++ +A S R+ Y L+T AA
Sbjct: 218 TLRSGEWVVA---LGSPLALSNTVTAGVISSTQRA---SQELGLRNRDINY---LQTDAA 268
Query: 607 VHPGGSGGAVVNLDGHMIGL 626
+ G SGG +VNLDG IG+
Sbjct: 269 ITFGNSGGPLVNLDGEAIGV 288
>sp|B4QZU6|HTRA2_DROSI Serine protease HTRA2, mitochondrial OS=Drosophila simulans
GN=HtrA2 PE=3 SV=1
Length = 422
Score = 36.2 bits (82), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 547 SLGSAAYVIGHGLFGPRCGLSPSVSSGVVAKVVKANLPSYGQSTLQRNSAYPVMLETTAA 606
+L S +V+ G LS +V++GV++ +A S R+ Y L+T AA
Sbjct: 210 TLRSGEWVVA---LGSPLALSNTVTAGVISSTQRA---SQELGLRNRDINY---LQTDAA 260
Query: 607 VHPGGSGGAVVNLDGHMIGL 626
+ G SGG +VNLDG IG+
Sbjct: 261 ITFGNSGGPLVNLDGEAIGV 280
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 244,015,112
Number of Sequences: 539616
Number of extensions: 10547606
Number of successful extensions: 22515
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 22288
Number of HSP's gapped (non-prelim): 236
length of query: 637
length of database: 191,569,459
effective HSP length: 124
effective length of query: 513
effective length of database: 124,657,075
effective search space: 63949079475
effective search space used: 63949079475
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)