BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006632
(637 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GZ63|PP397_ARATH Pentatricopeptide repeat-containing protein At5g25630
OS=Arabidopsis thaliana GN=At5g25630 PE=2 SV=2
Length = 574
Score = 696 bits (1795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/608 (57%), Positives = 435/608 (71%), Gaps = 51/608 (8%)
Query: 41 EKKQLYSNSKPTDSQP-------QTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQA 93
EKK++ S+P S P C C+ SCRTVRS TKLMN LIERG+P EAQ
Sbjct: 7 EKKKVPPMSEPERSTPIKTTGGQYRFCKSCVEGSSCRTVRSRTKLMNVLIERGRPHEAQT 66
Query: 94 IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
+F L E GH+PSL++YTTLLAA+T+QK++ SI SI+S+VE++G DSIFFNAVINAFS
Sbjct: 67 VFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFS 126
Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK--P 211
ESGNME+A+ KMKE GL PTTSTYNTLIKGYGIAGKPE S +LLDLM EGNV P
Sbjct: 127 ESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGP 186
Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
N+RT+NVLV+AWC +K + EAW V+ KM G++PD VTYNTIAT Y Q GE +AE +
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246
Query: 272 VE--MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
VE + +PNGRTCGI++ GYC+EG++++ LRF R MKE V NLV+FN LI GFV
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306
Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
E+MDRDG+DEVL LMKE V DVITYST+MNAWS+AG+M+K ++F +M KAG+KPDAH
Sbjct: 307 EVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAH 366
Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
AYSILAKGYVR +EP+KAEELL T+I PNVVIFTT+ISGWCS+GSMD A+ VF+KM
Sbjct: 367 AYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKM 425
Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
C+ GVSPN+KTFETLMWGY E +QPW+AEE+LQ+M+ GV P+ STFLLLAEA R GLT
Sbjct: 426 CKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLT 485
Query: 510 KEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVSSDQKGS 569
E+ + ++ +K K DI + LE+LY K+++ +S+ NLLQIP V + +
Sbjct: 486 DESNKAINALKCK----------DIEIAKLEKLYQKQSSGSSF-NLLQIP--VGKRELPT 532
Query: 570 AAALKKGRMLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQKQPLGQVGMYSQLAN 629
A A M LS +CK GAR+PIICQKQ Q G+ Q +
Sbjct: 533 AKA------------------------MNLS-ACKLGARVPIICQKQSQAQFGISGQFVH 567
Query: 630 SCTVVFLN 637
SCT VFL+
Sbjct: 568 SCT-VFLS 574
>sp|Q8S9D1|PP395_ARATH Pentatricopeptide repeat-containing protein At5g21222
OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1
Length = 831
Score = 568 bits (1463), Expect = e-161, Method: Compositional matrix adjust.
Identities = 272/478 (56%), Positives = 362/478 (75%), Gaps = 3/478 (0%)
Query: 35 KKNNPGEKKQLYSNSKPTDSQPQTH-CSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQA 93
K+ N + + ++ +S+ Q ++ C C +C VRS TKLMN LIERG+PQEA +
Sbjct: 281 KEANLADVEAVFKDSEEGRVQLRSFPCVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHS 340
Query: 94 IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
IFN LIE GHKPSL+TYTTL+ ALT QK F+S+ S++S+VE+NG+ PD+I FNA+INA S
Sbjct: 341 IFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASS 400
Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
ESGN+++AM F KMKESG PT ST+NTLIKGYG GK EES +LLD+M R+ ++PN
Sbjct: 401 ESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPND 460
Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV- 272
RT N+LV+AWCN++ I EAWN+++KM + G+KPDVVT+NT+A AYA+ G AE++I+
Sbjct: 461 RTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIP 520
Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
M HN V+PN RTCG I++GYC+EGK++EALRF MKE GVHPNL +FN LIKGF+ I
Sbjct: 521 RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIN 580
Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
D DGV EV+ LM+EF V PDV+T+ST+MNAWS+ G M +C+EI+ DM + GI PD HA+S
Sbjct: 581 DMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFS 640
Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE- 451
ILAKGY R EPEKAE++L M + G PNVVI+T IISGWCS G M +A++V+ KMC
Sbjct: 641 ILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGI 700
Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
G+SPNL T+ETL+WG+ EA+QPW+AEE+L+ M+ V P + T L+A+ ++ G++
Sbjct: 701 VGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVS 758
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 242/448 (54%), Gaps = 1/448 (0%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V S T ++N + G +A + ++ +++ G P +VTY +++AAL + + +++
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLN 255
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
+ +NG+ PD + +N++++ + SG +EA+ KM+ G+ P TY+ L+ G
Sbjct: 256 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG 315
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
+ E+ K+ D M++ G +KP + TY L++ + + + E ++ M +G+ PD +
Sbjct: 316 RCMEARKIFDSMTKRG-LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
+ + AYA+ G+ DQA V +M G+ PN T G +I CK G++++A+ + M +
Sbjct: 375 SILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 434
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
G+ P +++N LI G + +E++ M + + + I +++I+++ G + +
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494
Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
+++F+ M + G+KP+ Y+ L GY + ++A +LL M+ G PN V ++T+I+
Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554
Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
G+C M+ A+ +F +M GVSP++ T+ ++ G + R+ A+E+ + G
Sbjct: 555 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 614
Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKI 519
+ ST+ ++ LT +A ++ +
Sbjct: 615 ELSTYNIILHGLCKNKLTDDALQMFQNL 642
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 186/381 (48%), Gaps = 11/381 (2%)
Query: 89 QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI--HSIMSQVEENGMDPDSIFFN 146
++A+ +F+ L+ G S+ LA + ++ ++ M++ + + PD +
Sbjct: 32 EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91
Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
+I +G ++ + + G + L+KG + +++ ++ E
Sbjct: 92 ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151
Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA---ASGMKPDVVTYNTIATAYAQNGE 263
PN+ +YN+L++ C+E EA ++H MA G PDVV+Y T+ + + G+
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211
Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
+D+A EM G+ P+ T II+ CK + +A+ TM + GV P+ + +N
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 271
Query: 324 LIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
++ G+ E + +K+ R V PDV+TYS +M+ G + ++IFD M
Sbjct: 272 ILHGYCS---SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328
Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
K G+KP+ Y L +GY + + LL M+ +G HP+ +F+ +I + G +D
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388
Query: 441 RAIEVFDKMCEHGVSPNLKTF 461
+A+ VF KM + G++PN T+
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTY 409
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 156/336 (46%), Gaps = 6/336 (1%)
Query: 193 PEESVKLLDLMSREG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
P +V + M+R G V P+L TY +L+ C + + + + G + D +
Sbjct: 65 PAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIA 124
Query: 251 YNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
+ + + A ++++ M G PN + I++ G C E + +EAL M
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMM 184
Query: 310 KE---YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
+ G P++V + +I GF + D D M + + PDV+TY++I+ A A
Sbjct: 185 ADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKA 244
Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
MDK E+ + M K G+ PD Y+ + GY +P++A L M G P+VV +
Sbjct: 245 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTY 304
Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
+ ++ C +G A ++FD M + G+ P + T+ TL+ GY+ +L +M
Sbjct: 305 SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 364
Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
G+HP F +L A G +A + SK++ +
Sbjct: 365 NGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 400
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 169/354 (47%), Gaps = 4/354 (1%)
Query: 82 LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPD 141
L + G+ ++A F +I+ G P + Y +L+ L ++ ++ ++ + G+ +
Sbjct: 416 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 475
Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
+IFFN++I++ + G + E+ F M G+ P TYNTLI GY +AGK +E++KLL
Sbjct: 476 TIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535
Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
M G +KPN TY+ L+ +C + +A + +M +SG+ PD++TYN I Q
Sbjct: 536 GMVSVG-LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594
Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
A+E+ V + +G Q T II+ G CK +AL+ + + + F
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654
Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
N++I +++ D ++ + P+ TY + G +++ ++F M
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714
Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH---PNVVIFTTIISG 432
G D+ + + + ++ E +A L + E F +F ++SG
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 768
Score = 106 bits (265), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 134/267 (50%), Gaps = 1/267 (0%)
Query: 64 MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
+++ C +++S + G+ E++ +F ++ G KP+++TY TL+ + +
Sbjct: 468 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527
Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
+ ++S + G+ P+++ ++ +IN + + ME+A+ F +M+ SG++P TYN +
Sbjct: 528 DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNII 587
Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
++G + + K L + E + L TYN+++ C K +A + +
Sbjct: 588 LQGL-FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 646
Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
+K + T+N + A + G D+A+++ V NG+ PN T ++ +G ++E
Sbjct: 647 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 706
Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVE 330
+ +M++ G + + N +++ ++
Sbjct: 707 QLFLSMEDNGCTVDSGMLNFIVRELLQ 733
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 227/457 (49%), Gaps = 4/457 (0%)
Query: 76 TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
T L+ GK ++A I L G P ++TY +++ N+ S++ ++
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS- 199
Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
+ PD + +N ++ + +SG +++AM+ +M + P TY LI+
Sbjct: 200 --VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
++KLLD M R+ P++ TYNVLV C E + EA ++ M +SG +P+V+T+N I
Sbjct: 258 AMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
+ G AE+++ +M G P+ T I+I+ C++G + A+ M ++G
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
PN + +N L+ GF + D E L M PD++TY+T++ A G ++ EI
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
+ + G P Y+ + G + + KA +LL M P+ + +++++ G
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
+G +D AI+ F + G+ PN TF ++M G ++RQ RA + L M G P +++
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556
Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEE 532
+ +L E G+ KEA +L+++ NK + AE+
Sbjct: 557 YTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQ 593
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 161/319 (50%), Gaps = 1/319 (0%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
L+N + + G+ EA N++ G +P+++T+ +L ++ R+ +++ + G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
P + FN +IN G + A+D KM + G P + +YN L+ G+ K + ++
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
+ L+ M G P++ TYN ++ A C + + +A +++++++ G P ++TYNT+
Sbjct: 400 EYLERMVSRG-CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG 458
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
A+ G+ +A +++ EM ++P+ T ++ G +EGK+ EA++F + G+ PN
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
V FN ++ G + D + L M P+ +Y+ ++ + G + E+ +
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLN 578
Query: 378 DMGKAGIKPDAHAYSILAK 396
++ G+ + A + K
Sbjct: 579 ELCNKGLMKKSSAEQVAGK 597
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 180/397 (45%), Gaps = 56/397 (14%)
Query: 167 KMKESGLTPTTSTYNTLIKGY------GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
K++ SGL + TL GY G S L D+ S N +
Sbjct: 62 KVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVES------------NNHL 109
Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
R + E + + M G PD++ T+ + + G+ +A +++ +E +G
Sbjct: 110 RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV 169
Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF---------VEI 331
P+ T ++ISGYCK G+I AL M V P++V +N +++ +E+
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 332 MDR-----------------------DGVDEVLALMKEFR---VNPDVITYSTIMNAWST 365
+DR GV + L+ E R PDV+TY+ ++N
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
G +D+ + +DM +G +P+ ++I+ + AE+LL M+ GF P+VV
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
F +I+ C G + RAI++ +KM +HG PN ++ L+ G+ + ++ RA E L+ M
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
+ G +P T+ + A G ++A IL+++ +K
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 1/206 (0%)
Query: 74 SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
S L++ + K A ++ G P +VTY T+L AL + I++Q+
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440
Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
G P I +N VI+ +++G +A+ +M+ L P T TY++L+ G GK
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500
Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
+E++K R G ++PN T+N ++ C + A + + M G KP+ +Y
Sbjct: 501 DEAIKFFHEFERMG-IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 254 IATAYAQNGEADQAEEVIVEMEHNGV 279
+ A G A +A E++ E+ + G+
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGL 585
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 239/464 (51%), Gaps = 6/464 (1%)
Query: 61 SFCMNKE----SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAA 116
SFC + S R + +L + L++ K +A +F ++I P+++ ++ L +A
Sbjct: 39 SFCCERGFSAFSDRNLSYRERLRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSA 97
Query: 117 LTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPT 176
+ K+++ + ++ Q+E G+ + + +IN F + A K+ + G P
Sbjct: 98 IAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPN 157
Query: 177 TSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM 236
T T++TLI G + G+ E+++L+D M G+ KP+L T N LV C EA ++
Sbjct: 158 TITFSTLINGLCLEGRVSEALELVDRMVEMGH-KPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
KM G +P+ VTY + ++G+ A E++ +ME ++ + III G CK
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276
Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
G + A M+ G+ N++ +N+LI GF D ++L M + ++NP+V+T+
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336
Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
S +++++ G + + +E+ +M GI PD Y+ L G+ +E +KA +++ M+
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396
Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
G PN+ F +I+G+C +D +E+F KM GV + T+ TL+ G+ E +
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 456
Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
A+E+ Q M + V P T+ +L + G +++A I KI+
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 228/445 (51%), Gaps = 3/445 (0%)
Query: 74 SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
++ L+N L GK EA + + ++E G +P+ VTY +L + + ++ ++
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
EE + D++ ++ +I+ + G+++ A + F +M+ G+T TYN LI G+ AG+
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
++ KLL D++ R+ + PN+ T++VL+ ++ E + EA + +M G+ PD +TY
Sbjct: 315 DDGAKLLRDMIKRK--INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYT 372
Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
++ + + D+A +++ M G PN RT I+I+GYCK +I + L R M
Sbjct: 373 SLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR 432
Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
GV + V +N LI+GF E+ + E+ M +V P+++TY +++ G +K
Sbjct: 433 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 492
Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
EIF+ + K+ ++ D Y+I+ G + + A +L ++ G P V + +I G
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 552
Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
C G + A +F KM E G +P+ T+ L+ + ++ ++++ +K G
Sbjct: 553 LCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 612
Query: 493 KSTFLLLAEARRATGLTKEAKRILS 517
ST ++ + L K +LS
Sbjct: 613 ASTIKMVIDMLSDGRLKKSFLDMLS 637
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 221/447 (49%), Gaps = 1/447 (0%)
Query: 74 SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
+ + L+N L G+ EA + + ++E GHKP L+T TL+ L + + ++ ++
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219
Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
E G P+++ + V+N +SG AM+ KM+E + Y+ +I G G
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
+ + L + M +G + N+ TYN+L+ +CN + ++ M + P+VVT++
Sbjct: 280 DNAFNLFNEMEMKG-ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
+ ++ + G+ +AEE+ EM H G+ P+ T +I G+CKE + +A + M G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
PN+ FN+LI G+ + D E+ M V D +TY+T++ + G ++ K
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
E+F +M + P+ Y IL G E EKA E+ + +S ++ I+ II G
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
C+ +D A ++F + GV P +KT+ ++ G + AE + + M+ G P
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 494 STFLLLAEARRATGLTKEAKRILSKIK 520
T+ +L A G ++ +++ ++K
Sbjct: 579 WTYNILIRAHLGDGDATKSVKLIEELK 605
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 115/232 (49%), Gaps = 2/232 (0%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
+R+ L+N + + + +F + G VTY TL+ + N +
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
++ + P+ + + +++ ++G E+A++ F K+++S + YN +I G A
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
K +++ L + +G VKP ++TYN+++ C + ++EA + KM G PD TY
Sbjct: 523 KVDDAWDLFCSLPLKG-VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
N + A+ +G+A ++ ++I E++ G + T ++I +G++K++
Sbjct: 582 NILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID-MLSDGRLKKSF 632
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 213/385 (55%), Gaps = 5/385 (1%)
Query: 119 IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
I+K F+ ++ ++ E G P+ + + +I+ + G +E+A D F++M + GL
Sbjct: 179 IEKSFD----LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 234
Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
TY LI G G ++ ++ + M +G V PNL TYN ++ C + +A+ V +
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDG-VFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
M G+ ++VTYNT+ + + ++A +V+ +M+ +G+ PN T +I G+C GK
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
+ +AL R +K G+ P+LV +N+L+ GF D G +++ M+E + P +TY+
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
+++ ++ + M+K ++ M + G+ PD H YS+L G+ + + +A L +M+E
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473
Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
PN VI+ T+I G+C +GS RA+++ +M E ++PN+ ++ ++ + R+ AE
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Query: 479 EILQIMKAFGVHPQKSTFLLLAEAR 503
+++ M G+ P S L++ A+
Sbjct: 534 RLVEKMIDSGIDPSTSILSLISRAK 558
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 219/445 (49%), Gaps = 8/445 (1%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
++NS ++ + + FN +++ G P + LL + FN S ++ ++
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSK 158
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
+ D F +I E+G +E++ D ++ E G +P Y TLI G G+ E++
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
L M + G V N RTY VL+ + + + KM G+ P++ TYN +
Sbjct: 219 DLFFEMGKLGLV-ANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
++G A +V EM GV N T +I G C+E K+ EA + MK G++PN
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
L+ +N LI GF + + + L+L ++ + ++P ++TY+ +++ + G +
Sbjct: 338 LITYNTLIDGFCGV---GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
+ +M + GIKP Y+IL + R EKA +L ++M E G P+V ++ +I G+C
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
G M+ A +F M E PN + T++ GY + +RA ++L+ M+ + P +
Sbjct: 455 IKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVA 514
Query: 495 TFLLLAEARRATGLTKEAKRILSKI 519
++ + E +KEA+R++ K+
Sbjct: 515 SYRYMIEVLCKERKSKEAERLVEKM 539
Score = 149 bits (376), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 165/326 (50%), Gaps = 3/326 (0%)
Query: 73 RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
R+ T L+N L + G ++ ++ + E G P+L TY ++ L R + +
Sbjct: 234 RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
+ E G+ + + +N +I + EA +MK G+ P TYNTLI G+ GK
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 193 PEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
+++ L DL SR + P+L TYN+LV +C + + + A ++ +M G+KP VTY
Sbjct: 354 LGKALSLCRDLKSR--GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
+ +A++ ++A ++ + ME G+ P+ T ++I G+C +G++ EA R ++M E
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
PN VI+N +I G+ + ++L M+E + P+V +Y ++ +
Sbjct: 472 KNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531
Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKG 397
+ + + M +GI P S++++
Sbjct: 532 AERLVEKMIDSGIDPSTSILSLISRA 557
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 213 bits (542), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 120/458 (26%), Positives = 224/458 (48%), Gaps = 9/458 (1%)
Query: 69 CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
C V S +++ + + G+ +EA + + G+ P +++Y+T++ + +
Sbjct: 243 CWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWK 302
Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
++ ++ G+ P+S + ++I + EA + F +M G+ P T Y TLI G+
Sbjct: 303 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 362
Query: 189 IAGKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
G + K ++ SR+ + P++ TY ++ +C ++ EA + H+M G++PD
Sbjct: 363 KRGDIRAASKFFYEMHSRD--ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
VT+ + Y + G A V M G PN T +I G CKEG + A
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWS 364
M + G+ PN+ +N ++ G + ++E + L+ EF +N D +TY+T+M+A+
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCK---SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
+G MDK +EI +M G++P +++L G+ E E+LL M+ G PN
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
F +++ +C ++ A ++ MC GV P+ KT+E L+ G+ +AR A + Q M
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
K G ST+ +L + EA+ + +++ +
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 177/380 (46%), Gaps = 42/380 (11%)
Query: 76 TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
T L++ +RG + A F + P ++TYT +++ + ++
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414
Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
G++PDS+ F +IN + ++G+M++A M ++G +P TY TLI G G +
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474
Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
+ +LL M + G ++PN+ TYN +V C NI EA ++ + A+G+ D VTY T+
Sbjct: 475 ANELLHEMWKIG-LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533
Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
AY ++GE D+A+E++ EM G+QP T ++++G+C G +++ + M G+
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593
Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMN----------A 362
PN FN L+K + R+ + A+ K+ V PD TY ++ A
Sbjct: 594 PNATTFNSLVKQYCI---RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650
Query: 363 WS--------------------TAGFMDK-----CKEIFDDMGKAGIKPDAHAYSILAKG 397
W GF+ + +E+FD M + G+ D + +
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDT 710
Query: 398 YVREQEPEKAEELLMTMIES 417
+ + P+ + + +IE+
Sbjct: 711 KYKGKRPDTIVDPIDEIIEN 730
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 134/286 (46%)
Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
V + G+ +V +YN + Q G +A +++ ME G P+ + +++GYC
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
+ G++ + + MK G+ PN I+ +I I +E + M + PD +
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
Y+T+++ + G + + F +M I PD Y+ + G+ + + +A +L M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
G P+ V FT +I+G+C G M A V + M + G SPN+ T+ TL+ G +
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
A E+L M G+ P T+ + +G +EA +++ + +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 3/274 (1%)
Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG-KIKE 301
G P V ++ G +A V +M + G+ + +C + ++ K+ K
Sbjct: 172 GSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229
Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
A+ R E GV N+ +N++I ++ +L LM+ PDVI+YST++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
+ G +DK ++ + M + G+KP+++ Y + R + +AEE MI G P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349
Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
+ V++TT+I G+C G + A + F +M ++P++ T+ ++ G+ + A ++
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
M G+ P TF L G K+A R+
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 68/137 (49%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
T+ + LMN G ++ + + N ++ G P+ T+ +L+ I+ + +I
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 619
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
+ G+ PD + ++ ++ NM+EA F +MK G + + STY+ LIKG+
Sbjct: 620 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679
Query: 191 GKPEESVKLLDLMSREG 207
K E+ ++ D M REG
Sbjct: 680 KKFLEAREVFDQMRREG 696
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 212 bits (539), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 144/525 (27%), Positives = 257/525 (48%), Gaps = 31/525 (5%)
Query: 41 EKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIE 100
++K L S K + P C R + T L++ L + EA +F + +
Sbjct: 265 QRKDLDSAFKVFNEMPLKGCR--------RNEVAYTHLIHGLCVARRIDEAMDLFVKMKD 316
Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
P++ TYT L+ +L +R + +++ ++EE G+ P+ + +I++ E+
Sbjct: 317 DECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEK 376
Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
A + +M E GL P TYN LI GY G E++V +++LM + PN RTYN L+
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR-KLSPNTRTYNELI 435
Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
+ +C + N+ +A V++KM + PDVVTYN++ ++G D A ++ M G+
Sbjct: 436 KGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
P+ T +I CK +++EA ++++ GV+PN+V++ LI G+ + D +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
L M P+ +T++ +++ G + + + + M K G++P +IL ++
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
+ + + A M+ SG P+ +TT I +C +G + A ++ KM E+GVSP+L T
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 674
Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
+ +L+ GY + Q A ++L+ M+ G P + TFL L K +L
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL------------IKHLLEMKY 722
Query: 521 NKERTNEME-------AEEDIPVESLERLYHKEAT--TASYPNLL 556
K++ +E E E D VE LE++ T SY L+
Sbjct: 723 GKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 226/452 (50%), Gaps = 2/452 (0%)
Query: 69 CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
C + + K++N + G +EA + ++E G P TYT+L+ +K +S
Sbjct: 215 CPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFK 274
Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
+ +++ G + + + +I+ + ++EAMD F KMK+ PT TY LIK
Sbjct: 275 VFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
+ + E++ L+ M G +KPN+ TY VL+ + C++ +A ++ +M G+ P+V
Sbjct: 335 GSERKSEALNLVKEMEETG-IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
+TYN + Y + G + A +V+ ME + PN RT +I GYCK + +A+
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNK 452
Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
M E V P++V +N LI G + D +L+LM + + PD TY++++++ +
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
+++ ++FD + + G+ P+ Y+ L GY + + ++A +L M+ PN + F
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
+I G C+DG + A + +KM + G+ P + T L+ + A Q M + G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632
Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
P T+ + G +A+ +++K++
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR 664
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 150/545 (27%), Positives = 247/545 (45%), Gaps = 65/545 (11%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
TVR+ T L+ SL + EA + + E G KP++ TYT L+ +L Q +F ++
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
Q+ E G+ P+ I +NA+IN + + G +E+A+D M+ L+P T TYN LIKGY
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY-CK 440
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
+++ +L+ M E V P++ TYN L+ C N A+ ++ M G+ PD T
Sbjct: 441 SNVHKAMGVLNKM-LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
Y ++ + ++ ++A ++ +E GV PN +I GYCK GK+ EA M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV----NPDVITYSTIMNAWSTA 366
PN + FN LI G DG + L++E V P V T + +++
Sbjct: 560 SKNCLPNSLTFNALIHGLCA----DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615
Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
G D F M +G KPDAH Y+ + Y RE AE+++ M E+G P++ +
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675
Query: 427 TTIISGW--------------------------------------------------CSD 436
+++I G+ C+
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM 735
Query: 437 GSM---DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM-KAFGVHPQ 492
+M D +E+ +KM EH V+PN K++E L+ G E AE++ M + G+ P
Sbjct: 736 SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPS 795
Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASY 552
+ F L EA +++ + ++E+ + + + L + KE T+ +
Sbjct: 796 ELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCK-VLICGLYKKGEKERGTSVF 854
Query: 553 PNLLQ 557
NLLQ
Sbjct: 855 QNLLQ 859
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 212/422 (50%), Gaps = 2/422 (0%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
L+NSL G E + ++ ++E P++ TY ++ + +S++ E G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
+DPD + ++I + + +++ A F +M G Y LI G +A + +E++
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
L M ++ P +RTY VL+++ C + +EA N++ +M +G+KP++ TY + +
Sbjct: 309 DLFVKM-KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
+ ++A E++ +M G+ PN T +I+GYCK G I++A+ M+ + PN
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427
Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
+N LIKG+ + + VL M E +V PDV+TY+++++ +G D +
Sbjct: 428 TRTYNELIKGYCKSNVHKAMG-VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486
Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
M G+ PD Y+ + + + E+A +L ++ + G +PNVV++T +I G+C G
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
+D A + +KM PN TF L+ G + A + + M G+ P ST
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 498 LL 499
+L
Sbjct: 607 IL 608
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/490 (22%), Positives = 203/490 (41%), Gaps = 93/490 (18%)
Query: 70 RTVRSMTKLMNSLIE---RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
R + T+ N LI+ + +A + N ++E P +VTY +L+ F+S
Sbjct: 422 RKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
+ ++S + + G+ PD + ++I++ +S +EEA D F +++ G+ P Y LI G
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA-------------- 232
Y AGK +E+ +L+ M + N PN T+N L+ C + + EA
Sbjct: 542 YCKAGKVDEAHLMLEKMLSK-NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 233 ---------------------WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
++ +M +SG KPD TY T Y + G AE+++
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
+M NGV P+ T +I GY G+ A + M++ G P+ F LIK +E+
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM 720
Query: 332 ------------------MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM---- 369
M+ D V E+L M E V P+ +Y ++ G +
Sbjct: 721 KYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAE 780
Query: 370 --------------------------------DKCKEIFDDMGKAGIKPDAHAYSILAKG 397
++ ++ DDM G P + +L G
Sbjct: 781 KVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICG 840
Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
++ E E+ + +++ G++ + + + II G G ++ E+F+ M ++G +
Sbjct: 841 LYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFS 900
Query: 458 LKTFETLMWG 467
+T+ L+ G
Sbjct: 901 SQTYSLLIEG 910
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 168/378 (44%), Gaps = 37/378 (9%)
Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
YNTL+ G +E +K + + E V PN+ TYN +V +C N+ EA + K+
Sbjct: 186 YNTLLNSLARFGLVDE-MKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ------------------- 280
+G+ PD TY ++ Y Q + D A +V EM G +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 281 ----------------PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
P RT ++I C + EAL + M+E G+ PN+ + +L
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
I + E+L M E + P+VITY+ ++N + G ++ ++ + M +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
P+ Y+ L KGY + KA +L M+E P+VV + ++I G C G+ D A
Sbjct: 425 SPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
+ M + G+ P+ T+ +++ ++++ A ++ ++ GV+P + L +
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543
Query: 505 ATGLTKEAKRILSKIKNK 522
G EA +L K+ +K
Sbjct: 544 KAGKVDEAHLMLEKMLSK 561
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 61/134 (45%)
Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
Y+ L R ++ +++ M M+E PN+ + +++G+C G+++ A + K+
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
E G+ P+ T+ +L+ GY + + A ++ M G + + L
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 510 KEAKRILSKIKNKE 523
EA + K+K+ E
Sbjct: 305 DEAMDLFVKMKDDE 318
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 212 bits (539), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 120/441 (27%), Positives = 227/441 (51%), Gaps = 3/441 (0%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
L++ L K EA A+ + ++ G +P L TY T++ L + + S++ ++E+
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 250
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
++ D + + +I+A N+ +A++ F +M G+ P TYN+LI+ G+ ++
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 198 KLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
+LL D++ R+ N PN+ T++ L+ A+ E + EA + +M + PD+ TY+++
Sbjct: 311 RLLSDMIERKIN--PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
+ + D+A+ + M PN T +I G+CK +++E + R M + G+
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
N V +N LI+G + D D ++ M V PD+ITYS +++ G ++K +F
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
+ + K+ ++PD + Y+I+ +G + + E +L ++ G PNV+I+TT+ISG+C
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548
Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
G + A +F +M E G PN T+ TL+ + E+++ M++ G ST
Sbjct: 549 GLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 608
Query: 497 LLLAEARRATGLTKEAKRILS 517
++ L K +LS
Sbjct: 609 SMVINMLHDGRLEKSYLEMLS 629
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/437 (27%), Positives = 216/437 (49%), Gaps = 6/437 (1%)
Query: 77 KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
KL +++ K +A +F +++ PS+V + LL+A+ +F+ + S+ +++
Sbjct: 50 KLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNL 109
Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
+ D +N +IN F + A+ KM + G P T ++L+ GY + E+
Sbjct: 110 RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 169
Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
V L+D M +PN T+N L+ +EA ++ +M A G +PD+ TY T+
Sbjct: 170 VALVDQMFVM-EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 228
Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
+ G+ D A ++ +ME ++ + II C + +AL M G+ P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288
Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
N+V +N LI+ +L+ M E ++NP+V+T+S +++A+ G + + ++++
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
D+M K I PD YS L G+ ++A+ + MI PNVV + T+I G+C
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
++ +E+F +M + G+ N T+ TL+ G +A A++I + M + GV P T+
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 497 LLLAEARRATGLTKEAK 513
+L + GL K K
Sbjct: 469 SILLD-----GLCKYGK 480
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 160/323 (49%), Gaps = 1/323 (0%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V + L+ L G+ +A + +++IE P++VT++ L+ A + + +
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
++ + +DPD ++++IN F ++EA F M P TYNTLIKG+ A
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
+ EE ++L MS+ G V N TYN L++ + A + KM + G+ PD++TY
Sbjct: 410 RVEEGMELFREMSQRGLV-GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
+ + + G+ ++A V ++ + ++P+ T I+I G CK GK+++ ++
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
GV PN++I+ +I GF ++ D + MKE P+ TY+T++ A G
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAA 588
Query: 372 CKEIFDDMGKAGIKPDAHAYSIL 394
E+ +M G DA S++
Sbjct: 589 SAELIKEMRSCGFVGDASTISMV 611
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 148/290 (51%), Gaps = 1/290 (0%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V + + L+++ ++ GK EA+ +++ +I+ P + TY++L+ + R + +
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
+ P+ + +N +I F ++ +EE M+ F +M + GL T TYNTLI+G AG
Sbjct: 385 LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
+ + K+ M +G V P++ TY++L+ C + +A V + S M+PD+ TY
Sbjct: 445 DCDMAQKIFKKMVSDG-VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
N + + G+ + ++ + GV+PN +ISG+C++G +EA R MKE
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
G PN +N LI+ + D+ E++ M+ D T S ++N
Sbjct: 564 DGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Score = 95.9 bits (237), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 113/228 (49%), Gaps = 1/228 (0%)
Query: 64 MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
++K+ V + L+ + + +E +F + + G + VTY TL+ L
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
+ I ++ +G+ PD I ++ +++ + G +E+A+ F +++S + P TYN +
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506
Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
I+G AGK E+ L +S +G VKPN+ Y ++ +C + EA + +M G
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKG-VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
P+ TYNT+ A ++G+ + E+I EM G + T ++I+
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 209 bits (532), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 225/444 (50%), Gaps = 3/444 (0%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
++N L R + A AI +++ G+ PS+VT +LL R + +++ Q+ E G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
PD++ F +++ + EA+ +M G P TY +I G G+P+ ++
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
LL+ M + G ++ ++ Y+ ++ + C +++ +A N+ +M G++PDV TY+++ +
Sbjct: 226 NLLNKMEK-GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
G A ++ +M + PN T +I + KEGK+ EA + M + + PN
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 318 LVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
+V +N LI GF + DR D ++ LM PDV+TY+T++N + A + E+F
Sbjct: 345 IVTYNSLINGFC-MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
DM + G+ + Y+ L G+ + + + A+ + M+ G HPN++ + T++ G C +
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
G +++A+ VF+ + + + P++ T+ + G +A + ++ + GV P +
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
+ GL +EA + K+K
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMK 547
Score = 206 bits (524), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 234/445 (52%), Gaps = 3/445 (0%)
Query: 74 SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
+ T L++ L + K EA A+ ++ G +P LVTY ++ L + + ++++++
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
E+ ++ D + ++ VI++ + ++++A++ F +M G+ P TY++LI G+
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
++ +LL D++ R+ + PN+ T+N L+ A+ E + EA + +M + P++VTYN
Sbjct: 292 SDASRLLSDMLERK--INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
++ + + D+A+++ M P+ T +I+G+CK K+ + + R M
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
G+ N V + LI GF + D D V M V+P+++TY+T+++ G ++K
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
+F+ + K+ ++PD + Y+I+++G + + E +L ++ G P+V+ + T+ISG
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529
Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
+C G + A +F KM E G P+ T+ TL+ + + E+++ M++
Sbjct: 530 FCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 589
Query: 493 KSTFLLLAEARRATGLTKEAKRILS 517
ST+ L+ + L K +LS
Sbjct: 590 ASTYGLVTDMLHDGRLDKGFLEVLS 614
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/437 (25%), Positives = 216/437 (49%), Gaps = 6/437 (1%)
Query: 77 KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
KL + + K EA +F +++ PS+V ++ LL+A+ K+F+ + S ++E
Sbjct: 35 KLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEIL 94
Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
G+ + +N +IN + A+ KM + G P+ T N+L+ G+ + E+
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
V L+D M G +P+ T+ LV +EA ++ +M G +PD+VTY +
Sbjct: 155 VALVDQMVEMG-YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
+ GE D A ++ +ME ++ + +I CK + +AL M G+ P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273
Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
++ ++ LI +L+ M E ++NP+V+T++++++A++ G + + +++F
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333
Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
D+M + I P+ Y+ L G+ ++A+++ M+ P+VV + T+I+G+C
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
+ +E+F M G+ N T+ TL+ G+ +A A+ + + M + GVHP T+
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 497 LLLAEARRATGLTKEAK 513
L + GL K K
Sbjct: 454 NTLLD-----GLCKNGK 465
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 160/323 (49%), Gaps = 1/323 (0%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V + + L++ L G+ +A + ++++E P++VT+ +L+ A + + +
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
++ + +DP+ + +N++IN F ++EA F M P TYNTLI G+ A
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
K + ++L MSR G V N TY L+ + + A V +M + G+ P+++TY
Sbjct: 395 KVVDGMELFRDMSRRGLV-GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
NT+ +NG+ ++A V ++ + ++P+ T I+ G CK GK+++ ++
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
GV P+++ +N +I GF + ++ + MKE PD TY+T++ A G
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573
Query: 372 CKEIFDDMGKAGIKPDAHAYSIL 394
E+ +M DA Y ++
Sbjct: 574 SAELIKEMRSCRFAGDASTYGLV 596
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 27/278 (9%)
Query: 55 QPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL 114
+ Q + ++K+ V + L+N + K + +F ++ G + VTYTTL+
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 115 AALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT 174
++ + Q+ +G+ P+ + +N +++ ++G +E+AM F +++S +
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
P TYN + +G AGK E+ L +S +G VKP++ YN ++ +C + EA+
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG-VKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
+ KM G PD TYNT+ A+ ++G+ + E+I EM R+C
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM---------RSC-------- 584
Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
RFA YG+ +++ L KGF+E++
Sbjct: 585 ---------RFAGDASTYGLVTDMLHDGRLDKGFLEVL 613
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 209 bits (532), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 227/445 (51%), Gaps = 3/445 (0%)
Query: 74 SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
+ T L++ L K EA A+ + +++ G +P LVTY T++ L + + S++ ++
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249
Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
E+ ++ D + +N +I+ + +M++A++ F +M G+ P TY++LI G+
Sbjct: 250 EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 309
Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
++ +LL D++ R+ + PN+ T++ L+ A+ E + EA + +M + PD+ TY+
Sbjct: 310 SDASRLLSDMIERK--INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
++ + + D+A+ + M PN T +I G+CK +++E + R M +
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
G+ N V + LI GF + D D V M V+P+++TY+ +++ G + K
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
+F+ + ++ ++PD + Y+I+ +G + + E EL + G PNV+ + T+ISG
Sbjct: 488 MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG 547
Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
+C GS + A + KM E G PN T+ TL+ + E+++ M++ G
Sbjct: 548 FCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
Query: 493 KSTFLLLAEARRATGLTKEAKRILS 517
ST L+ L K +LS
Sbjct: 608 ASTIGLVTNMLHDGRLDKSFLDMLS 632
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 219/436 (50%), Gaps = 6/436 (1%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
L N L + K +A +F ++++ PS+V + LL+A+ +F + S+ Q++ G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
+ D ++ IN F + A+ KM + G P T ++L+ GY + + ++V
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
L+D M G KP+ T+ L+ +EA ++ +M G +PD+VTY T+
Sbjct: 174 ALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
+ G+ D A ++ +ME ++ + II G CK + +AL M G+ P+
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
+ ++ LI +L+ M E ++NP+V+T+S +++A+ G + + ++++D
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
+M K I PD YS L G+ ++A+ + MI PNVV ++T+I G+C
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
++ +E+F +M + G+ N T+ TL+ G+ +AR A+ + + M + GVHP T+
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 498 LLAEARRATGLTKEAK 513
+L + GL K K
Sbjct: 473 ILLD-----GLCKNGK 483
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/450 (24%), Positives = 224/450 (49%), Gaps = 1/450 (0%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
+ +++ L+N + +A A+ + ++E G+KP T+TTL+ L + + + +++
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVD 212
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
Q+ + G PD + + V+N + G+++ A+ KM++ + YNT+I G
Sbjct: 213 QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK 272
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
++++ L M +G ++P++ TY+ L+ CN ++A ++ M + P+VVT+
Sbjct: 273 HMDDALNLFTEMDNKG-IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF 331
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
+ + A+ + G+ +AE++ EM + P+ T +I+G+C ++ EA M
Sbjct: 332 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 391
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
PN+V ++ LIKGF + + E+ M + + + +TY+T+++ + A D
Sbjct: 392 KDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 451
Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
+ +F M G+ P+ Y+IL G + + KA + + S P++ + +I
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511
Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
G C G ++ E+F + GVSPN+ + T++ G+ A+ +L+ MK G P
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571
Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKN 521
T+ L AR G + + ++ ++++
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRS 601
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 219/444 (49%), Gaps = 3/444 (0%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
+N R + A A+ +++ G++P +VT ++LL KR + +++ Q+ E G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
PD+ F +I+ EA+ +M + G P TY T++ G G + ++
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
LL M + G ++ ++ YN ++ C K++ +A N+ +M G++PDV TY+++ +
Sbjct: 244 SLLKKMEK-GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
G A ++ +M + PN T +I + KEGK+ EA + M + + P+
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 318 LVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
+ ++ LI GF + DR D + LM P+V+TYST++ + A +++ E+F
Sbjct: 363 IFTYSSLINGFC-MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
+M + G+ + Y+ L G+ + ++ + A+ + M+ G HPN++ + ++ G C +
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
G + +A+ VF+ + + P++ T+ ++ G +A + E+ + GV P +
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
+ G +EA +L K+K
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMK 565
Score = 192 bits (488), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 217/437 (49%), Gaps = 1/437 (0%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
++ KL++++ + K + ++ + G L TY+ + + + + +++
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
+++ + G +PD + ++++N + S + +A+ +M E G P T T+ TLI G +
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
K E+V L+D M + G +P+L TY +V C +I A +++ KM ++ DVV
Sbjct: 202 NKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
YNTI + D A + EM++ G++P+ T +IS C G+ +A R M
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
E ++PN+V F+ LI FV+ +++ M + ++PD+ TYS+++N + +D
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
+ K +F+ M P+ YS L KG+ + + E+ EL M + G N V +TT+I
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
G+ D A VF +M GV PN+ T+ L+ G + + +A + + ++ +
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 491 PQKSTFLLLAEARRATG 507
P T+ ++ E G
Sbjct: 501 PDIYTYNIMIEGMCKAG 517
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 162/323 (50%), Gaps = 1/323 (0%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V + + L++ L G+ +A + +++IE P++VT++ L+ A + + +
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
++ + +DPD ++++IN F ++EA F M P TY+TLIKG+ A
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
+ EE ++L MS+ G V N TY L+ + ++ A V +M + G+ P+++TY
Sbjct: 413 RVEEGMELFREMSQRGLVG-NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
N + +NG+ +A V ++ + ++P+ T I+I G CK GK+++ +
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
GV PN++ +N +I GF ++ D +L MKE P+ TY+T++ A G +
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591
Query: 372 CKEIFDDMGKAGIKPDAHAYSIL 394
E+ +M G DA ++
Sbjct: 592 SAELIKEMRSCGFAGDASTIGLV 614
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 136/316 (43%), Gaps = 6/316 (1%)
Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
P++ +N L+ A ++ +M G+ D+ TY+ + + + A V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
+ +M G +P+ T +++GYC +I +A+ M E G P+ F LI G
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG--- 197
Query: 331 IMDRDGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
+ + E +AL M + PD++TY T++N G +D + M K I+ D
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 257
Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
Y+ + G + + + A L M G P+V ++++IS C+ G A +
Sbjct: 258 VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
M E ++PN+ TF L+ + + + AE++ M + P T+ L
Sbjct: 318 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 377
Query: 508 LTKEAKRILSKIKNKE 523
EAK + + +K+
Sbjct: 378 RLDEAKHMFELMISKD 393
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 118/226 (52%), Gaps = 1/226 (0%)
Query: 64 MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
++K+ V + + L+ + + +E +F + + G + VTYTTL+ +
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
++ + Q+ G+ P+ + +N +++ ++G + +AM F ++ S + P TYN +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
I+G AGK E+ +L +S +G V PN+ YN ++ +C + + EA +++ KM G
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKG-VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
P+ TYNT+ A ++G+ + + E+I EM G + T G++
Sbjct: 569 PLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 209 bits (531), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 243/490 (49%), Gaps = 2/490 (0%)
Query: 32 IPAKKNNPGEKKQLYS-NSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQE 90
I +K + + LYS NS + S + C FC ++ + +++ + I K +
Sbjct: 5 ISSKAKSFLHRNLLYSGNSGTSPSSSFSICGFCFSRRAYSNGSDYREMLRNGIRFMKLDD 64
Query: 91 AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
+ +F ++++ PS+ ++ LL+A++ K+++ + + Q++ G+ + N ++N
Sbjct: 65 SLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLN 124
Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
F + A+ KM + G P+ T+ +L+ G+ + +++ + D M G K
Sbjct: 125 CFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG-YK 183
Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
PN+ YN ++ C K + A +++++M G+ PDVVTYN++ + +G A +
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243
Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
+ M + P+ T +I KEG++ EA F M + P++V ++LLI G
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303
Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
D +E+ M PDV+TYS ++N + + ++ ++F +M + G+ +
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363
Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
Y+IL +GY R + AEE+ M+ G HPN++ + ++ G C +G +++A+ + M
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
++G+ ++ T+ ++ G +A + A +I + G+ P T+ + GL +
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRR 483
Query: 511 EAKRILSKIK 520
EA + K+K
Sbjct: 484 EADALFRKMK 493
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 191/380 (50%), Gaps = 1/380 (0%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
L+N + A + +I+ GH+PS+VT+ +LL R + Q+ G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
P+ + +N +I+ +S ++ A+D +M++ G+ P TYN+LI G +G+ ++
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
+++ M++ + P++ T+N L+ A E ++EA +M + PD+VTY+ +
Sbjct: 242 RMVSCMTKR-EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
D+AEE+ M G P+ T I+I+GYCK K++ ++ M + GV N
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
V + +LI+G+ + +E+ M V+P++ITY+ +++ G ++K I
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
DM K G+ D Y+I+ +G + E A ++ ++ G P++ +TT++ G G
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480
Query: 438 SMDRAIEVFDKMCEHGVSPN 457
A +F KM E G+ PN
Sbjct: 481 LRREADALFRKMKEDGILPN 500
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 97/200 (48%)
Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
+++ + M D ++ M + R P + +S +++A S D +++ M G
Sbjct: 52 MLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG 111
Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
I + +IL + R + A L MI+ G P++V F ++++G+C + A+
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171
Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
+FD+M G PN+ + T++ G +++Q A ++L M+ G+ P T+ L
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 504 RATGLTKEAKRILSKIKNKE 523
++G +A R++S + +E
Sbjct: 232 CSSGRWSDATRMVSCMTKRE 251
Score = 73.9 bits (180), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 2/167 (1%)
Query: 46 YSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKP 105
Y SK + + C + R + T L+ GK A+ IF ++ G P
Sbjct: 336 YCKSKKVEHGMKLFCEM-SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Query: 106 SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF 165
+++TY LL L + I++ +++NGMD D + +N +I ++G + +A D +
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY 454
Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
+ GL P TY T++ G G E+ L M +G + PN
Sbjct: 455 CSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDG-ILPN 500
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 230/480 (47%), Gaps = 36/480 (7%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V ++ ++N+L + GK ++ + + E G P +VTY TL++A + + +M+
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
+ G P +N VIN + G E A + F +M SGL+P ++TY +L+ G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 192 KPEESVK-------------------LLDLMSREGNVK---------------PNLRTYN 217
E+ K ++ L +R GN+ P+ Y
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
+L++ +C + I+ A N+ ++M G DVVTYNTI + +A+++ EM
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
+ P+ T I+I G+CK G ++ A+ + MKE + ++V +N L+ GF ++ D D
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
E+ A M + P I+YS ++NA + G + + ++D+M IKP + + KG
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594
Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH--GVS 455
Y R E L MI GF P+ + + T+I G+ + +M +A + KM E G+
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV 654
Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
P++ T+ +++ G+ Q AE +L+ M GV+P +ST+ + + EA RI
Sbjct: 655 PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 196/424 (46%), Gaps = 36/424 (8%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V + ++N L + GK + A+ +F ++ G P TY +LL + + S
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFS 364
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
+ + PD + F+++++ F+ SGN+++A+ F +KE+GL P Y LI+GY G
Sbjct: 365 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 424
Query: 192 KPEESVKLLDLMSREG----------------------------------NVKPNLRTYN 217
++ L + M ++G + P+ T
Sbjct: 425 MISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLT 484
Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
+L+ C N+ A + KM ++ DVVTYNT+ + + G+ D A+E+ +M
Sbjct: 485 ILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
+ P + I+++ C +G + EA R M + P ++I N +IKG+ +
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG--KAGIKPDAHAYSILA 395
+ L M PD I+Y+T++ + M K + M + G+ PD Y+ +
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL 664
Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
G+ R+ + ++AE +L MIE G +P+ +T +I+G+ S ++ A + D+M + G S
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724
Query: 456 PNLK 459
P+ K
Sbjct: 725 PDDK 728
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 217/453 (47%), Gaps = 19/453 (4%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
T S++ +++ L+ G+ +AQ+ +I + S V+ ++ NS+ S
Sbjct: 112 TSLSLSAMIHILVRSGRLSDAQSCLLRMI----RRSGVSRLEIV---------NSLDSTF 158
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
S N DS+F + +I + ++ + EA + F ++ G T + N LI
Sbjct: 159 SNCGSN----DSVF-DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRI 213
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
G E + + +SR G V N+ T N++V A C + + + + ++ G+ PD+VT
Sbjct: 214 GWVELAWGVYQEISRSG-VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVT 272
Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
YNT+ +AY+ G ++A E++ M G P T +I+G CK GK + A M
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
G+ P+ + L+ + D ++V + M+ V PD++ +S++M+ ++ +G +D
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
K F+ + +AG+ PD Y+IL +GY R+ A L M++ G +VV + TI+
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
G C + A ++F++M E + P+ T L+ G+ + A E+ Q MK +
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
T+ L + G AK I + + +KE
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 92/186 (49%), Gaps = 3/186 (1%)
Query: 64 MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
++KE T S + L+N+L +G EA +++ +I KP+++ +++
Sbjct: 542 VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNA 601
Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE--SGLTPTTSTYN 181
+ S + ++ G PD I +N +I F NM +A KM+E GL P TYN
Sbjct: 602 SDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYN 661
Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
+++ G+ + +E+ +L M G V P+ TY ++ + ++ N+TEA+ + +M
Sbjct: 662 SILHGFCRQNQMKEAEVVLRKMIERG-VNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720
Query: 242 SGMKPD 247
G PD
Sbjct: 721 RGFSPD 726
Score = 34.3 bits (77), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 31/73 (42%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V + +++ + + +EA+ + +IE G P TYT ++ Q I
Sbjct: 657 VFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHD 716
Query: 132 QVEENGMDPDSIF 144
++ + G PD F
Sbjct: 717 EMLQRGFSPDDKF 729
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 224/446 (50%), Gaps = 4/446 (0%)
Query: 58 THCSFCMNKESCRTVR-SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAA 116
+HCSF + S VR K+ + + K +A +F ++++ PS+V ++ LL+A
Sbjct: 33 SHCSFWVRDFS--GVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSA 90
Query: 117 LTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPT 176
+ +F+ + S+ Q++ G+ + ++ +IN F + A+ KM + G P
Sbjct: 91 IAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPD 150
Query: 177 TSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM 236
T N+L+ G+ + ++V L+ M G +P+ T+N L+ +EA ++
Sbjct: 151 IVTLNSLLNGFCHGNRISDAVSLVGQMVEMG-YQPDSFTFNTLIHGLFRHNRASEAVALV 209
Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
+M G +PD+VTY + + G+ D A ++ +ME ++P II C
Sbjct: 210 DRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY 269
Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
+ +AL M G+ PN+V +N LI+ +L+ M E ++NP+V+T+
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
S +++A+ G + + ++++D+M K I PD YS L G+ ++A+ + MI
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
PNVV + T+I G+C +D +E+F +M + G+ N T+ TL+ G+ +AR+
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449
Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEA 502
A+ + + M + GV P T+ +L +
Sbjct: 450 AQIVFKQMVSDGVLPDIMTYSILLDG 475
Score = 202 bits (515), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 221/444 (49%), Gaps = 3/444 (0%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
L+N R + A A+ +++ G++P +VT +LL R + S++ Q+ E G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
PDS FN +I+ EA+ +M G P TY ++ G G + ++
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
LL M +G ++P + YN ++ A CN KN+ +A N+ +M G++P+VVTYN++
Sbjct: 242 SLLKKME-QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
G A ++ +M + PN T +I + KEGK+ EA + M + + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 318 LVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
+ ++ LI GF + DR D + LM P+V+TY+T++ + A +D+ E+F
Sbjct: 361 IFTYSSLINGFC-MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
+M + G+ + Y+ L G+ + +E + A+ + M+ G P+++ ++ ++ G C++
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479
Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
G ++ A+ VF+ + + P++ T+ ++ G +A + ++ + GV P T+
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
+ GL +EA + ++K
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMK 563
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 225/445 (50%), Gaps = 3/445 (0%)
Query: 74 SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
+ L++ L + EA A+ + ++ G +P LVTY ++ L + + S++ ++
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247
Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
E+ ++P + +N +I+A N+ +A++ F +M G+ P TYN+LI+ G+
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
++ +LL D++ R+ + PN+ T++ L+ A+ E + EA + +M + PD+ TY+
Sbjct: 308 SDASRLLSDMIERK--INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 365
Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
++ + + D+A+ + M PN T +I G+CK ++ E + R M +
Sbjct: 366 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
G+ N V + LI GF + + D V M V PD++TYS +++ G ++
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
+F+ + ++ ++PD + Y+I+ +G + + E +L ++ G PNVV +TT++SG
Sbjct: 486 LVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
+C G + A +F +M E G P+ T+ TL+ + + E+++ M++
Sbjct: 546 FCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 605
Query: 493 KSTFLLLAEARRATGLTKEAKRILS 517
ST L+ L K ++LS
Sbjct: 606 ASTIGLVTNMLHDGRLDKSFLKMLS 630
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 208/436 (47%), Gaps = 1/436 (0%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
+ ++ L+N + +A ++ ++E G++P T+ TL+ L R + +++
Sbjct: 151 IVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVD 210
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
++ G PD + + V+N + G+++ A+ KM++ + P YNT+I
Sbjct: 211 RMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYK 270
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
+++ L M +G ++PN+ TYN L+R CN ++A ++ M + P+VVT+
Sbjct: 271 NVNDALNLFTEMDNKG-IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
+ + A+ + G+ +AE++ EM + P+ T +I+G+C ++ EA M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
PN+V +N LIKGF + D E+ M + + + +TY+T+++ + A D
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449
Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
+ +F M G+ PD YSIL G + E A + + S P++ + +I
Sbjct: 450 AQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIE 509
Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
G C G ++ ++F + GV PN+ T+ T+M G+ A+ + + MK G P
Sbjct: 510 GMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLP 569
Query: 492 QKSTFLLLAEARRATG 507
T+ L A G
Sbjct: 570 DSGTYNTLIRAHLRDG 585
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 132/316 (41%), Gaps = 6/316 (1%)
Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
P++ ++ L+ A ++ +M G+ ++ TY+ + + + + A V
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
+ +M G +P+ T +++G+C +I +A+ M E G P+ FN LI G
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 331 IMDRDGVDEVLALMKEFRV---NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
+ E +AL+ V PD++TY ++N G +D + M + I+P
Sbjct: 199 ---HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
Y+ + + A L M G PNVV + ++I C+ G A +
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
M E ++PN+ TF L+ + + + AE++ M + P T+ L
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 508 LTKEAKRILSKIKNKE 523
EAK + + +K+
Sbjct: 376 RLDEAKHMFELMISKD 391
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 1/226 (0%)
Query: 64 MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
++K+ V + L+ + + E +F + + G + VTYTTL+ +
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
++ + Q+ +G+ PD + ++ +++ +G +E A+ F ++ S + P TYN +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
I+G AGK E+ L +S +G VKPN+ TY ++ +C + EA + +M G
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKG-VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
PD TYNT+ A+ ++G+ + E+I EM + T G++
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 612
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 81/177 (45%)
Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
M + R P ++ +S +++A + D + + M GI + + YSIL + R +
Sbjct: 72 MVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQ 131
Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
A +L M++ G+ P++V ++++G+C + A+ + +M E G P+ TF T
Sbjct: 132 LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNT 191
Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
L+ G + A ++ M G P T+ ++ G A +L K++
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 96/225 (42%)
Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
K+ +A+ M + P++V F+ L+ ++ D V + M+ ++ ++ TYS
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
++N + + + M K G +PD + L G+ A L+ M+E
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
G+ P+ F T+I G A+ + D+M G P+L T+ ++ G + A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
+L+ M+ + P + + +A +A + +++ NK
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 127/506 (25%), Positives = 239/506 (47%), Gaps = 41/506 (8%)
Query: 87 KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
K +A A+F +I PSLV ++ +A+ K+FN + Q+E NG+ + N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
+IN F A K+ + G P T+T+NTLIKG + GK E+V L+D M
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
G +P++ TYN +V C + + A +++ KM +K DV TY+TI + ++G D
Sbjct: 188 G-CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 267 AEEVIVEMEHNGVQ-----------------------------------PNGRTCGIIIS 291
A + EME G++ PN T +++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
+ KEGK++EA + M G+ PN++ +N L+ G+ + +L LM + +P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
D++T+++++ + +D ++F ++ K G+ +A YSIL +G+ + + + AEEL
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
M+ G P+V+ + ++ G C +G +++A+E+F+ + + + + + T++ G +
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAE 531
+ A + + GV P T+ ++ G EA +L K++ + A
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME-----EDGNAP 541
Query: 532 EDIPVESLERLYHKEATTASYPNLLQ 557
D +L R + ++ + L++
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIE 567
Score = 199 bits (507), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/441 (26%), Positives = 224/441 (50%), Gaps = 3/441 (0%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
L+ L GK EA + + ++E G +P +VTY +++ + + ++ ++EE
Sbjct: 164 LIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 223
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
+ D ++ +I++ G ++ A+ F +M+ G+ + TYN+L++G AGK +
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283
Query: 198 KLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
LL D++SRE + PN+ T+NVL+ + E + EA + +M G+ P+++TYNT+
Sbjct: 284 LLLKDMVSRE--IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
Y +A ++ M N P+ T +I GYC ++ + ++ R + + G+
Sbjct: 342 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401
Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
N V +++L++GF + +E+ M V PDV+TY +++ G ++K EIF
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461
Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
+D+ K+ + Y+ + +G + + E A L ++ G PNV+ +T +ISG C
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521
Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
GS+ A + KM E G +PN T+ TL+ + + ++++ MK+ G S+
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 581
Query: 497 LLLAEARRATGLTKEAKRILS 517
++ + + L K +LS
Sbjct: 582 KMVIDMLLSGELDKSFLDMLS 602
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 70/129 (54%), Gaps = 3/129 (2%)
Query: 76 TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
T ++ + + GK ++A +F +L G KP+++TYT +++ L + + + ++ ++EE
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536
Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
+G P+ +N +I A G++ + +MK G + S+ +I ++G+ ++
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML-LSGELDK 595
Query: 196 SVKLLDLMS 204
S LD++S
Sbjct: 596 S--FLDMLS 602
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 220/434 (50%), Gaps = 1/434 (0%)
Query: 87 KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
K +A +F + +P L+ ++ L + + K+++ + + Q+E G+ + +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
+IN + A K+ + G P T T++TLI G + G+ E+++L+D M
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
G+ KP L T N LV C +++A ++ +M +G +P+ VTY + ++G+
Sbjct: 172 GH-KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
A E++ +ME ++ + III G CK+G + A M+ G +++I+ LI+
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
GF D ++L M + ++ PDV+ +S +++ + G + + +E+ +M + GI P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
D Y+ L G+ +E + +KA +L M+ G PN+ F +I+G+C +D +E+F
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
KM GV + T+ TL+ G+ E + A+E+ Q M + V P ++ +L +
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 507 GLTKEAKRILSKIK 520
G ++A I KI+
Sbjct: 471 GEPEKALEIFEKIE 484
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 226/448 (50%), Gaps = 3/448 (0%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
T+ ++ L+N L GK +A + + ++E G +P+ VTY +L + + ++
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
++EE + D++ ++ +I+ + G+++ A + F +M+ G Y TLI+G+ A
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 191 GKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
G+ ++ KLL D++ R+ + P++ ++ L+ + E + EA + +M G+ PD V
Sbjct: 296 GRWDDGAKLLRDMIKRK--ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
TY ++ + + + D+A ++ M G PN RT I+I+GYCK I + L R M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413
Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
GV + V +N LI+GF E+ + E+ M RV PD+++Y +++ G
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
+K EIF+ + K+ ++ D Y+I+ G + + A +L ++ G P+V + +
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533
Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
I G C GS+ A +F KM E G SPN T+ L+ + ++ ++++ +K G
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF 593
Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILS 517
ST ++ + L K +LS
Sbjct: 594 SVDASTVKMVVDMLSDGRLKKSFLDMLS 621
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 223/449 (49%), Gaps = 5/449 (1%)
Query: 74 SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
+ + L+N L G+ EA + + ++E GHKP+L+T L+ L + + + ++ ++
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
E G P+ + + V+ +SG AM+ KM+E + Y+ +I G G
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
+ + L + M +G K ++ Y L+R +C + ++ M + PDVV ++
Sbjct: 264 DNAFNLFNEMEIKG-FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
+ + + G+ +AEE+ EM G+ P+ T +I G+CKE ++ +A M G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 314 VHPNLVIFNLLIKGFVE--IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
PN+ FN+LI G+ + ++D DG+ E+ M V D +TY+T++ + G ++
Sbjct: 383 CGPNIRTFNILINGYCKANLID-DGL-ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440
Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
KE+F +M ++PD +Y IL G EPEKA E+ + +S ++ I+ II
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500
Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
G C+ +D A ++F + GV P++KT+ ++ G + A+ + + M+ G P
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560
Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIK 520
T+ +L A G ++ +++ +IK
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIK 589
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 206 bits (524), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 133/477 (27%), Positives = 232/477 (48%), Gaps = 47/477 (9%)
Query: 79 MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS------- 131
+++ + GKP A IF +I KP+L+T TLL L R+ S SI S
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV---RYPSSFSISSAREVFDD 194
Query: 132 -----------------------------------QVEENGMDPDSIFFNAVINAFSESG 156
V E ++PD++ +N ++ A S+ G
Sbjct: 195 MVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKG 254
Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
+ + + MK++GL P TYN L+ GY G +E+ ++++LM ++ NV P+L TY
Sbjct: 255 RLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM-KQTNVLPDLCTY 313
Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
N+L+ CN ++ E +M M + ++PDVVTYNT+ + G + +A +++ +ME+
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEN 373
Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE-YGVHPNLVIFNLLIKGFVEIMDRD 335
+GV+ N T I + CKE K + R + + + +G P++V ++ LIK ++++ D
Sbjct: 374 DGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLS 433
Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
G E++ M + + + IT +TI++A +D+ + + K G D Y L
Sbjct: 434 GALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLI 493
Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
G+ RE++ EKA E+ M + P V F ++I G C G + A+E FD++ E G+
Sbjct: 494 MGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLL 553
Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
P+ TF +++ GY + + +A E P T +L G+T++A
Sbjct: 554 PDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKA 610
Score = 177 bits (448), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 124/504 (24%), Positives = 237/504 (47%), Gaps = 45/504 (8%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
V++ L+N GK ++A + ++ E P VTY T+L A++ + R + + ++
Sbjct: 204 VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL 263
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
+++NG+ P+ + +N ++ + + G+++EA MK++ + P TYN LI G A
Sbjct: 264 LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNA 323
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT-EAWNVMHKMAASGMK---- 245
G E ++L+D M + ++P++ TYN L+ C E ++ EA +M +M G+K
Sbjct: 324 GSMREGLELMDAM-KSLKLQPDVVTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQV 381
Query: 246 --------------------------------PDVVTYNTIATAYAQNGEADQAEEVIVE 273
PD+VTY+T+ AY + G+ A E++ E
Sbjct: 382 THNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
M G++ N T I+ CKE K+ EA + + G + V + LI GF
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501
Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
+ E+ MK+ ++ P V T+++++ G + E FD++ ++G+ PD ++
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561
Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
+ GY +E EKA E I+ F P+ +++G C +G ++A+ F+ + E
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER 621
Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
+ T+ T++ + + ++ A ++L M+ G+ P + T+ G E
Sbjct: 622 EVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETD 680
Query: 514 RILSKIKNK----ERTNEMEAEED 533
+L K K +R ++E E++
Sbjct: 681 ELLKKFSGKFGSMKRDLQVETEKN 704
Score = 116 bits (290), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 128/254 (50%), Gaps = 4/254 (1%)
Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG---YCKEGKIKEA 302
P ++ +AY G+ A ++ +M ++PN TC ++ G Y I A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGF-VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
M + GV N+ FN+L+ G+ +E D + + ++ EF+VNPD +TY+TI+
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
A S G + KE+ DM K G+ P+ Y+ L GY + ++A +++ M ++ P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
++ + +I+G C+ GSM +E+ D M + P++ T+ TL+ G E A +++
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 482 QIMKAFGVHPQKST 495
+ M+ GV + T
Sbjct: 369 EQMENDGVKANQVT 382
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 139/296 (46%), Gaps = 9/296 (3%)
Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
H P+ I +S Y EGK AL+ + M + PNL+ N L+ G V
Sbjct: 124 HLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183
Query: 336 GVD---EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM-GKAGIKPDAHAY 391
+ EV M + V+ +V T++ ++N + G ++ + + M + + PD Y
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243
Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
+ + K ++ +ELL+ M ++G PN V + ++ G+C GS+ A ++ + M +
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
V P+L T+ L+ G A E++ MK+ + P T+ L + GL+ E
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Query: 512 AKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQI----PNVVS 563
A++++ +++N + + +I ++ L + +EA T L+ + P++V+
Sbjct: 364 ARKLMEQMEN-DGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVT 418
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 89/201 (44%), Gaps = 37/201 (18%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
TV + L+ L GK + A F+ L E
Sbjct: 520 TVSTFNSLIGGLCHHGKTELAMEKFDELAE------------------------------ 549
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
+G+ PD FN++I + + G +E+A + + + + P T N L+ G
Sbjct: 550 -----SGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
G E+++ + + E V + TYN ++ A+C +K + EA++++ +M G++PD T
Sbjct: 605 GMTEKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFT 662
Query: 251 YNTIATAYAQNGEADQAEEVI 271
YN+ + ++G+ + +E++
Sbjct: 663 YNSFISLLMEDGKLSETDELL 683
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 117/401 (29%), Positives = 203/401 (50%), Gaps = 7/401 (1%)
Query: 84 ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI 143
+ G ++A+A+F+ +I G P Y +L+ +K + ++ ++++ +
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418
Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
+ V+ SG+++ A + +M SG P Y TLIK + + +++++L M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
+G + P++ YN L+ K + EA + + +M +G+KP+ TY + Y + E
Sbjct: 479 KEQG-IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
A++ + EM GV PN C +I+ YCK+GK+ EA R+M + G+ + + +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 324 LIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
L+ G + D VD+ + +E R + PDV +Y ++N +S G M K IFD+M
Sbjct: 598 LMNG---LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
+ G+ P+ Y++L G+ R E EKA+ELL M G HPN V + TII G+C G +
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714
Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
A +FD+M G+ P+ + TL+ G RA I
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Score = 192 bits (487), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 122/488 (25%), Positives = 225/488 (46%), Gaps = 39/488 (7%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
++ + G A I +I G +P++V YTTL+ RF ++ +++E G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
+ PD +N++I S++ M+EA +M E+GL P TY I GY A + +
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
K + M RE V PN L+ +C + + EA + M G+ D TY +
Sbjct: 543 KYVKEM-RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
+N + D AEE+ EM G+ P+ + G++I+G+ K G +++A M E G+ PN
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
++I+N+L+ GF + + E+L M ++P+ +TY TI++ + +G + + +FD
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKA------------------------------ 407
+M G+ PD+ Y+ L G R + E+A
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGK 781
Query: 408 ----EELLMTMIESGFH----PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
E+L +++ F PN V + +I C +G+++ A E+F +M + P +
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841
Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
T+ +L+ GY + + + A G+ P + ++ A G+T +A ++ ++
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Query: 520 KNKERTNE 527
K ++
Sbjct: 902 FAKNAVDD 909
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 196/417 (47%), Gaps = 19/417 (4%)
Query: 59 HCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT 118
C NK C T L+N ++GK EA + + ++++ G TYT L+ L
Sbjct: 550 ECGVLPNKVLC------TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603
Query: 119 IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
+ + I ++ G+ PD + +IN FS+ GNM++A F +M E GLTP
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663
Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
YN L+ G+ +G+ E++ +LLD MS +G + PN TY ++ +C ++ EA+ + +
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKG-LHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722
Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
M G+ PD Y T+ + + ++A I G + +I+ K GK
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAI-TIFGTNKKGCASSTAPFNALINWVFKFGK 781
Query: 299 IK---EALR--FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
+ E L + +G PN V +N++I + + + E+ M+ + P V
Sbjct: 782 TELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
ITY++++N + G + +FD+ AGI+PD YS++ +++E KA L+
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900
Query: 414 M-----IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
M ++ G ++ ++SG+ G M+ A +V + M P+ T L+
Sbjct: 901 MFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/509 (22%), Positives = 193/509 (37%), Gaps = 127/509 (24%)
Query: 137 GMDPDSIFFNAVINAFSESGNMEEA-------------------------------MDTF 165
G D + F + + + G +EEA +D F
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205
Query: 166 WK----MKESGLTPTTSTYNTLIKGYGIAG----------KPEE-----------SVKLL 200
W M E + TY+ LI + AG K E+ ++KL
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
+ M +G V P TY+VL+ C K + +A +++ +M + G+ D TY+ + +
Sbjct: 266 ESMICKGLV-PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324
Query: 261 NGEADQAEEVIVEMEHNGVQ-----------------------------------PNGRT 285
AD A+ ++ EM +G+ P +
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384
Query: 286 CGIIISGYCKEGKIKEALRFARTMKEY--------------------------------- 312
+I GYC+E +++ MK+
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 313 --GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
G PN+VI+ LIK F++ VL MKE + PD+ Y++++ S A MD
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
+ + +M + G+KP+A Y GY+ E A++ + M E G PN V+ T +I
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
+ +C G + A + M + G+ + KT+ LM G + + AEEI + M+ G+
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624
Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
P ++ +L G ++A I ++
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 148/332 (44%), Gaps = 42/332 (12%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V S L+N + G Q+A +IF+ ++E G P+++ Y LL ++
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY---- 187
++ G+ P+++ + +I+ + +SG++ EA F +MK GL P + Y TL+ G
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Query: 188 --------------GIA----------------GKPEESVKLLDLM---SREGNVKPNLR 214
G A GK E ++L+ + S + KPN
Sbjct: 747 DVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV 806
Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
TYN+++ C E N+ A + H+M + + P V+TY ++ Y + G + V E
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866
Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEAL-----RFARTMKEYGVHPNLVIFNLLIKGFV 329
G++P+ +II+ + KEG +AL FA+ + G ++ L+ GF
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFA 926
Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
++ + + ++V+ M + PD T ++N
Sbjct: 927 KVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 103/267 (38%), Gaps = 56/267 (20%)
Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL----VIFNLLI----- 325
E G +G GI+ GY +G I+EA+ + + P L V+ + L+
Sbjct: 143 EFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRL 202
Query: 326 -------KGFVE---IMD-----------------RDGVDEVLALMKEFR---------- 348
KG VE + D + G D + KEFR
Sbjct: 203 DLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGAL 262
Query: 349 ----------VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
+ P TY +++ ++ K + +M G+ D H YS+L G
Sbjct: 263 KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322
Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
++ + + A+ L+ M+ G + ++ I +G M++A +FD M G+ P
Sbjct: 323 LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382
Query: 459 KTFETLMWGYSEARQPWRAEEILQIMK 485
+ + +L+ GY + + E+L MK
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMK 409
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 225/434 (51%), Gaps = 1/434 (0%)
Query: 87 KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
K +A +F ++I+ P+++ + L +A+ K++ + ++ Q+E G+ +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
+IN F + A T K+ + G P T +NTL+ G + + E+++L+D M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
G+ KP L T N LV C +++A ++ +M +G +P+ VTY + ++G+
Sbjct: 188 GH-KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
A E++ +ME ++ + III G CK+G + A M+ G +++ +N LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
GF D ++L M + +++P+V+T+S +++++ G + + ++ +M + GI P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
+ Y+ L G+ +E E+A +++ MI G P+++ F +I+G+C +D +E+F
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
+M GV N T+ TL+ G+ ++ + A+++ Q M + V P ++ +L +
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 507 GLTKEAKRILSKIK 520
G ++A I KI+
Sbjct: 487 GELEKALEIFGKIE 500
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 220/426 (51%), Gaps = 3/426 (0%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
T+ ++ L+N L GK +A + + ++E G +P+ VTY +L + + ++
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
++EE + D++ ++ +I+ + G+++ A + F +M+ G TYNTLI G+ A
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 191 GKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
G+ ++ KLL D++ R+ + PN+ T++VL+ ++ E + EA ++ +M G+ P+ +
Sbjct: 312 GRWDDGAKLLRDMIKRK--ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
TYN++ + + ++A +++ M G P+ T I+I+GYCK +I + L R M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
GV N V +N L++GF + + ++ M RV PD+++Y +++ G +
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489
Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
+K EIF + K+ ++ D Y I+ G + + A +L ++ G + + +
Sbjct: 490 EKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIM 549
Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
IS C S+ +A +F KM E G +P+ T+ L+ + A E+++ MK+ G
Sbjct: 550 ISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF 609
Query: 490 HPQKST 495
ST
Sbjct: 610 PADVST 615
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/514 (23%), Positives = 257/514 (50%), Gaps = 14/514 (2%)
Query: 44 QLYSNSKPTDSQPQTHCSFCMNKES---CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIE 100
+L+S T Q + + C ES ++ +++ ++N K A + +++
Sbjct: 93 RLFSAIAKT-KQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMK 151
Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
G++P V + TLL L ++ R + ++ ++ E G P I N ++N +G + +
Sbjct: 152 LGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSD 211
Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
A+ +M E+G P TY ++ +G+ +++LL M E N+K + Y++++
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYSIII 270
Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
C + ++ A+N+ ++M G K D++TYNT+ + G D +++ +M +
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
PN T ++I + KEGK++EA + + M + G+ PN + +N LI GF + + ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
+ LM +PD++T++ ++N + A +D E+F +M G+ + Y+ L +G+ +
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
+ E A++L M+ P++V + ++ G C +G +++A+E+F K+ + + ++
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF-LLLAEARRATGLTKEAKRILSKI 519
+ ++ G A + A ++ + GV + ++++E R L+K + I
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK------ADI 564
Query: 520 KNKERTNEMEAEEDIPVESLER--LYHKEATTAS 551
++ T E A +++ L R L +ATTA+
Sbjct: 565 LFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 216/427 (50%), Gaps = 6/427 (1%)
Query: 87 KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
K +A A+F +++ PS++ ++ LL+A+ +F+ + S+ Q++ G+ + ++
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
+IN F + A+ KM + G P T ++L+ GY + + E+V L+D M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
G +PN T+N L+ +EA ++ +M A G +PD+VTY + + G+ D
Sbjct: 181 G-YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
A ++ +ME ++P II G CK + +AL + M+ G+ PN+V ++ LI
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
+L+ M E ++NPDV T+S +++A+ G + + ++++D+M K I P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
YS L G+ ++A+++ M+ P+VV + T+I G+C ++ +EVF
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
+M + G+ N T+ L+ G +A A+EI + M + GV P T+ L +
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD----- 474
Query: 507 GLTKEAK 513
GL K K
Sbjct: 475 GLCKNGK 481
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 230/445 (51%), Gaps = 3/445 (0%)
Query: 74 SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
+ L++ L K EA A+ + ++ G +P LVTY ++ L + + ++++++
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
E+ ++P + +N +I+ + +M++A++ F +M+ G+ P TY++LI G+
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
++ +LL D++ R+ + P++ T++ L+ A+ E + EA + +M + P +VTY+
Sbjct: 308 SDASRLLSDMIERK--INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
++ + + D+A+++ M P+ T +I G+CK +++E + R M +
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
G+ N V +N+LI+G + D D E+ M V P+++TY+T+++ G ++K
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
+F+ + ++ ++P + Y+I+ +G + + E +L + G P+VV + T+ISG
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545
Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
+C GS + A +F +M E G PN + TL+ + E+++ M++ G
Sbjct: 546 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Query: 493 KSTFLLLAEARRATGLTKEAKRILS 517
ST L+ L K +LS
Sbjct: 606 ASTIGLVTNMLHDGRLDKSFLDMLS 630
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 221/444 (49%), Gaps = 3/444 (0%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
L+N R + A A+ +++ G++P++VT ++LL KR + +++ Q+ G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
P+++ FN +I+ EAM +M G P TY ++ G G + +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
LL+ M +G ++P + YN ++ C K++ +A N+ +M G++P+VVTY+++ +
Sbjct: 242 NLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
G A ++ +M + P+ T +I + KEGK+ EA + M + + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 318 LVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
+V ++ LI GF + DR D ++ M PDV+TY+T++ + +++ E+F
Sbjct: 361 IVTYSSLINGFC-MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
+M + G+ + Y+IL +G + + + A+E+ M+ G PN++ + T++ G C +
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
G +++A+ VF+ + + P + T+ ++ G +A + ++ + GV P +
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
+ G +EA + ++K
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMK 563
Score = 188 bits (478), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 218/450 (48%), Gaps = 1/450 (0%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
+ +++ L+N + EA A+ + + G++P+ VT+ TL+ L + + + +++
Sbjct: 151 IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALID 210
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
++ G PD + + V+N + G+ + A + KM++ L P YNT+I G
Sbjct: 211 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 270
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
++++ L M +G ++PN+ TY+ L+ CN ++A ++ M + PDV T+
Sbjct: 271 HMDDALNLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
+ + A+ + G+ +AE++ EM + P+ T +I+G+C ++ EA + M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
P++V +N LIKGF + + EV M + + + +TY+ ++ AG D
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 449
Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
+EIF +M G+ P+ Y+ L G + + EKA + + S P + + +I
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
G C G ++ ++F + GV P++ + T++ G+ A+ + + MK G P
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKN 521
+ L AR G + + ++ ++++
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEMRS 599
Score = 142 bits (358), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 149/300 (49%), Gaps = 2/300 (0%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V + + L+++ ++ GK EA+ +++ +++ PS+VTY++L+ + R + +
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
+ PD + +N +I F + +EE M+ F +M + GL T TYN LI+G AG
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
+ + ++ M +G V PN+ TYN L+ C + +A V + S M+P + TY
Sbjct: 446 DCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
N + + G+ + ++ + GV+P+ +ISG+C++G +EA + MKE
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
G PN +N LI+ + DR+ E++ M+ D T + N G +DK
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD-GRLDK 623
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 159/323 (49%), Gaps = 1/323 (0%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V + + L++ L G+ +A + +++IE P + T++ L+ A + + +
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
++ + +DP + ++++IN F ++EA F M P TYNTLIKG+
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
+ EE +++ MS+ G V N TYN+L++ + A + +M + G+ P+++TY
Sbjct: 411 RVEEGMEVFREMSQRGLVG-NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
NT+ +NG+ ++A V ++ + ++P T I+I G CK GK+++ +
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 529
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
GV P++V +N +I GF ++ D + MKE P+ Y+T++ A G +
Sbjct: 530 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREA 589
Query: 372 CKEIFDDMGKAGIKPDAHAYSIL 394
E+ +M G DA ++
Sbjct: 590 SAELIKEMRSCGFAGDASTIGLV 612
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 124/243 (51%), Gaps = 1/243 (0%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
++ + + L+N + EA+ +F ++ P +VTY TL+ KR +
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
++ + G+ +++ +N +I ++G+ + A + F +M G+ P TYNTL+ G
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
GK E+++ + + + R ++P + TYN+++ C + + W++ ++ G+KPDVV
Sbjct: 480 GKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
YNT+ + + + G ++A+ + EM+ +G PN +I ++G + + + M+
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598
Query: 311 EYG 313
G
Sbjct: 599 SCG 601
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 114/228 (50%), Gaps = 1/228 (0%)
Query: 62 FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
F ++K V + L+ + + +E +F + + G + VTY L+ L
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
+ I ++ +G+ P+ + +N +++ ++G +E+AM F ++ S + PT TYN
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505
Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
+I+G AGK E+ L +S +G VKP++ YN ++ +C + + EA + +M
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKG-VKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564
Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
G P+ YNT+ A ++G+ + + E+I EM G + T G++
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 204 bits (518), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/376 (29%), Positives = 198/376 (52%), Gaps = 2/376 (0%)
Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESG-NMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
SI+ + +G P + +NAV++A S N+ A + F +M ES ++P TYN LI+G
Sbjct: 155 SIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRG 214
Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
+ AG + ++ L D M +G + PN+ TYN L+ +C + I + + ++ MA G++P
Sbjct: 215 FCFAGNIDVALTLFDKMETKGCL-PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEP 273
Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
++++YN + + G + V+ EM G + T +I GYCKEG +AL
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333
Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
M +G+ P+++ + LI + + + E L M+ + P+ TY+T+++ +S
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393
Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
G+M++ + +M G P Y+ L G+ + E A +L M E G P+VV +
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
+T++SG+C +D A+ V +M E G+ P+ T+ +L+ G+ E R+ A ++ + M
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Query: 487 FGVHPQKSTFLLLAEA 502
G+ P + T+ L A
Sbjct: 514 VGLPPDEFTYTALINA 529
Score = 203 bits (517), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 128/448 (28%), Positives = 232/448 (51%), Gaps = 46/448 (10%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI-HSI 129
V+S ++L SLI++ A +I + G P +++Y +L A KR S ++
Sbjct: 140 VVKSYSRL--SLIDK-----ALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192
Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
++ E+ + P+ +N +I F +GN++ A+ F KM+ G P TYNTLI GY
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNV------------------------------- 218
K ++ KLL M+ +G ++PNL +YNV
Sbjct: 253 LRKIDDGFKLLRSMALKG-LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 219 ----LVRAWCNEKNITEAWNVMH-KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
L++ +C E N +A VMH +M G+ P V+TY ++ + + G ++A E + +
Sbjct: 312 TYNTLIKGYCKEGNFHQAL-VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
M G+ PN RT ++ G+ ++G + EA R R M + G P++V +N LI G
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
+ VL MKE ++PDV++YST+++ + + +D+ + +M + GIKPD YS
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
L +G+ ++ ++A +L M+ G P+ +T +I+ +C +G +++A+++ ++M E G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEIL 481
V P++ T+ L+ G ++ + A+ +L
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 190/380 (50%), Gaps = 1/380 (0%)
Query: 86 GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
G A +F+ + G P++VTY TL+ ++ + ++ + G++P+ I +
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278
Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
N VIN G M+E +M G + TYNTLIKGY G +++ + M R
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338
Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
G + P++ TY L+ + C N+ A + +M G+ P+ TY T+ ++Q G +
Sbjct: 339 HG-LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
+A V+ EM NG P+ T +I+G+C GK+++A+ MKE G+ P++V ++ ++
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
GF D D V M E + PD ITYS+++ + + +++++M + G+
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
PD Y+ L Y E + EKA +L M+E G P+VV ++ +I+G A +
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 446 FDKMCEHGVSPNLKTFETLM 465
K+ P+ T+ TL+
Sbjct: 578 LLKLFYEESVPSDVTYHTLI 597
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 190/378 (50%), Gaps = 16/378 (4%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
L+ + G +A + ++ G PS++TYT+L+ ++ N + Q+ G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
+ P+ + +++ FS+ G M EA +M ++G +P+ TYN LI G+ + GK E+++
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
+L+ M +G + P++ +Y+ ++ +C ++ EA V +M G+KPD +TY+++
Sbjct: 436 AVLEDMKEKG-LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
+ + +A ++ EM G+ P+ T +I+ YC EG +++AL+ M E GV P+
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554
Query: 318 LVIFNLLIKGF-VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN--------------A 362
+V +++LI G + R+ +L L E V DV ++ I N
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKG 614
Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
+ G M + ++F+ M KPD AY+I+ G+ R + KA L M++SGF +
Sbjct: 615 FCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLH 674
Query: 423 VVIFTTIISGWCSDGSMD 440
V ++ +G ++
Sbjct: 675 TVTVIALVKALHKEGKVN 692
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 216/489 (44%), Gaps = 56/489 (11%)
Query: 74 SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
S ++N L G+ +E + + G+ VTY TL+ + F+ + +++
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
+G+ P I + ++I++ ++GNM AM+ +M+ GL P TY TL+ G+ G
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
E+ ++L M+ G P++ TYN L+ C + +A V+ M G+ PDVV+Y+T
Sbjct: 397 NEAYRVLREMNDNG-FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
+ + + ++ + D+A V EM G++P+ T +I G+C++ + KEA M G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
+ P PD TY+ ++NA+ G ++K
Sbjct: 516 L-P----------------------------------PDEFTYTALINAYCMEGDLEKAL 540
Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT----- 428
++ ++M + G+ PD YS+L G ++ +A+ LL+ + P+ V + T
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
Query: 429 ----------IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
+I G+C G M A +VF+ M P+ + ++ G+ A +A
Sbjct: 601 SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 660
Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVES 538
+ + M G T + L +A G E ++ + R+ E+ E V
Sbjct: 661 TLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL---RSCELSEAEQAKV-- 715
Query: 539 LERLYHKEA 547
L + H+E
Sbjct: 716 LVEINHREG 724
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 180/373 (48%), Gaps = 37/373 (9%)
Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK-NITEAWN 234
T+S ++ ++K Y ++++ ++ L G P + +YN ++ A K NI+ A N
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHG-FMPGVLSYNAVLDATIRSKRNISFAEN 191
Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
V +M S + P+V TYN + + G D A + +ME G PN T +I GYC
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV------EI------MDRDG--VDEV 340
K KI + + R+M G+ PNL+ +N++I G E+ M+R G +DEV
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 341 L---------------------ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
A M + P VITY++++++ AG M++ E D M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
G+ P+ Y+ L G+ ++ +A +L M ++GF P+VV + +I+G C G M
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
+ AI V + M E G+SP++ ++ T++ G+ + A + + M G+ P T+ L
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 500 AEARRATGLTKEA 512
+ TKEA
Sbjct: 492 IQGFCEQRRTKEA 504
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 178/389 (45%), Gaps = 21/389 (5%)
Query: 69 CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
C R+ T L++ ++G EA + + + G PS+VTY L+ + + +
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
++ ++E G+ PD + ++ V++ F S +++EA+ +M E G+ P T TY++LI+G+
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
+ +E+ L + M R G + P+ TY L+ A+C E ++ +A + ++M G+ PDV
Sbjct: 497 EQRRTKEACDLYEEMLRVG-LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDV 555
Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
VTY+ + + +A+ +++++ + P+ T +I C + K +
Sbjct: 556 VTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVS---- 610
Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
LIKGF D+V M PD Y+ +++ AG
Sbjct: 611 ---------------LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGD 655
Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
+ K ++ +M K+G L K +E + + +++ ++ S
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKV 715
Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
++ +G+MD ++V +M + G PN
Sbjct: 716 LVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 215/438 (49%), Gaps = 4/438 (0%)
Query: 76 TKLMNSLIE-RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
TKL+ R P+ + + ++E +P + Y L+ R + ++ ++
Sbjct: 128 TKLIKGFFTLRNIPKAVRVM--EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMR 185
Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
PD++ +N +I + G ++ A+ ++ PT TY LI+ + G +
Sbjct: 186 SKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVD 245
Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
E++KL+D M G +KP++ TYN ++R C E + A+ ++ + G +PDV++YN +
Sbjct: 246 EALKLMDEMLSRG-LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
A G+ ++ E+++ +M PN T I+I+ C++GKI+EA+ + MKE G+
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
P+ ++ LI F D E L M PD++ Y+T++ G D+ E
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
IF +G+ G P++ +Y+ + + +A +++ M+ +G P+ + + ++IS C
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484
Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
+G +D A E+ M P++ T+ ++ G+ +A + A +L+ M G P ++
Sbjct: 485 REGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNET 544
Query: 495 TFLLLAEARRATGLTKEA 512
T+ +L E G EA
Sbjct: 545 TYTVLIEGIGFAGYRAEA 562
Score = 188 bits (478), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 206/399 (51%), Gaps = 3/399 (0%)
Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
S+H + + V + G +PD I +I F N+ +A+ +++ G P YN LI
Sbjct: 108 SLHLLETMVRK-GYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165
Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
G+ + +++ ++LD M R + P+ TYN+++ + C+ + A V++++ +
Sbjct: 166 NGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224
Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
+P V+TY + A G D+A +++ EM G++P+ T II G CKEG + A
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284
Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
R ++ G P+++ +N+L++ + + ++++ M + +P+V+TYS ++
Sbjct: 285 MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344
Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
G +++ + M + G+ PDA++Y L + RE + A E L TMI G P++V
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404
Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
+ T+++ C +G D+A+E+F K+ E G SPN ++ T+ + RA ++ M
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464
Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
+ G+ P + T+ + G+ EA +L +++ E
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 182/393 (46%), Gaps = 7/393 (1%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
++ SL RGK A + N L+ +P+++TYT L+ A ++ + +M ++ G
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
+ PD +N +I + G ++ A + ++ G P +YN L++ GK EE
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
KL+ M E PN+ TY++L+ C + I EA N++ M G+ PD +Y+ + A
Sbjct: 319 KLMTKMFSE-KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
+ + G D A E + M +G P+ +++ CK GK +AL + E G PN
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
+N + D+ ++ M ++PD ITY+++++ G +D+ E+
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497
Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
DM P Y+I+ G+ + E A +L +M+ +G PN +T +I G G
Sbjct: 498 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557
Query: 438 SMDRAIEV------FDKMCEHGVSPNLKTFETL 464
A+E+ D + E+ +TF L
Sbjct: 558 YRAEAMELANDLVRIDAISEYSFKRLHRTFPLL 590
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 161/336 (47%), Gaps = 10/336 (2%)
Query: 67 ESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
++C+ TV + T L+ + + G EA + + ++ G KP + TY T++ + + +
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
++ +E G +PD I +N ++ A G EE KM P TY+ LI
Sbjct: 282 AFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 341
Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
GK EE++ LL LM +G + P+ +Y+ L+ A+C E + A + M + G
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEKG-LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400
Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
PD+V YNT+ +NG+ADQA E+ ++ G PN + + S G AL
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMN 361
M G+ P+ + +N +I R+G VDE L+ + R +P V+TY+ ++
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLC----REGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
+ A ++ + + M G +P+ Y++L +G
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 112/226 (49%), Gaps = 1/226 (0%)
Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
C+ G E+L TM G +P++++ LIKGF + + V+ ++++F PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
Y+ ++N + +D + D M PD Y+I+ + + A ++L
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
++ P V+ +T +I +G +D A+++ D+M G+ P++ T+ T++ G +
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
RA E+++ ++ G P ++ +L A G +E +++++K+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 45/189 (23%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIMSQVEEN 136
++ +L + GK +A IF L E G P+ +Y T+ +AL + + ++H I+ ++ N
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL-EMMSN 467
Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE-------------------------- 170
G+DPD I +N++I+ G ++EA + M+
Sbjct: 468 GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 527
Query: 171 ---------SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR-----EGNVKPNLRTY 216
+G P +TY LI+G G AG E+++L + + R E + K RT+
Sbjct: 528 INVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTF 587
Query: 217 ---NVLVRA 222
NVL R+
Sbjct: 588 PLLNVLQRS 596
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 118/415 (28%), Positives = 211/415 (50%), Gaps = 1/415 (0%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
++ KL++++ + K ++ + G +L TY L+ + + + +++
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
++ + G +P + ++++N + + +A+ +M E G P T T+ TLI G +
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
K E+V L+D M + G +PNL TY V+V C +I A+N+++KM A+ ++ DVV
Sbjct: 129 NKASEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
+NTI + + D A + EME G++PN T +IS C G+ +A + M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
E ++PNLV FN LI FV+ +++ M + ++PD+ TY++++N + +D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
K K++F+ M PD Y+ L KG+ + + E EL M G + V +TT+I
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
G DG D A +VF +M GV P++ T+ L+ G + +A E+ M+
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 222/444 (50%), Gaps = 1/444 (0%)
Query: 74 SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
+ T L++ L K EA A+ + +++ G +P+LVTY ++ L + + ++++++
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
E ++ D + FN +I++ + ++++A++ F +M+ G+ P TY++LI G+
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
++ +LL M E + PNL T+N L+ A+ E EA + M + PD+ TYN+
Sbjct: 237 SDASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
+ + + D+A+++ M P+ T +I G+CK ++++ R M G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
+ + V + LI+G D D +V M V PD++TYS +++ G ++K
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
E+FD M K+ IK D + Y+ + +G + + + +L ++ G PNVV + T+ISG
Sbjct: 416 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
CS + A + KM E G P+ T+ TL+ + + E+++ M++
Sbjct: 476 CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 535
Query: 494 STFLLLAEARRATGLTKEAKRILS 517
ST L+A L K +LS
Sbjct: 536 STIGLVANMLHDGRLDKSFLDMLS 559
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 223/444 (50%), Gaps = 3/444 (0%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
L+N R + A A+ +++ G++PS+VT ++LL KR + +++ Q+ E G
Sbjct: 51 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 110
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
PD+I F +I+ EA+ +M + G P TY ++ G G + +
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 170
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
LL+ M ++ ++ +N ++ + C +++ +A N+ +M G++P+VVTY+++ +
Sbjct: 171 NLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
G A +++ +M + PN T +I + KEGK EA + M + + P+
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 318 LVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
+ +N LI GF + DR D ++ M PD+ TY+T++ + + ++ E+F
Sbjct: 290 IFTYNSLINGFC-MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
+M G+ D Y+ L +G + + + A+++ M+ G P+++ ++ ++ G C++
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408
Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
G +++A+EVFD M + + ++ + T++ G +A + ++ + GV P T+
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468
Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
+ + L +EA +L K+K
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMK 492
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 217/437 (49%), Gaps = 1/437 (0%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
++ +++ L+N + +A A+ + ++E G++P +T+TTL+ L + + + +++
Sbjct: 79 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 138
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
++ + G P+ + + V+N + G+++ A + KM+ + + +NT+I
Sbjct: 139 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 198
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
++++ L M +G ++PN+ TY+ L+ C+ ++A ++ M + P++VT
Sbjct: 199 RHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257
Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
+N + A+ + G+ +AE++ +M + P+ T +I+G+C ++ +A + M
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
P+L +N LIKGF + + E+ M + D +TY+T++ G D
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
+++F M G+ PD YSIL G + EKA E+ M +S ++ I+TT+I
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
G C G +D ++F + GV PN+ T+ T++ G R A +L+ MK G
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497
Query: 491 PQKSTFLLLAEARRATG 507
P T+ L A G
Sbjct: 498 PDSGTYNTLIRAHLRDG 514
Score = 175 bits (444), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 205/419 (48%), Gaps = 1/419 (0%)
Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
PS+ + LL+A+ K+F+ + S+ +++ G+ + +N +IN F + A+
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
KM + G P+ T ++L+ GY + ++V L+D M G +P+ T+ L+
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLF 126
Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
+EA ++ +M G +P++VTY + + G+ D A ++ +ME ++ +
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
II CK + +AL + M+ G+ PN+V ++ LI ++L+ M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
E ++NP+++T++ +++A+ G + +++ DDM K I PD Y+ L G+
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
+KA+++ M+ P++ + T+I G+C ++ E+F +M G+ + T+ TL
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
+ G A+++ + M + GV P T+ +L + G ++A + ++ E
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 118/228 (51%), Gaps = 1/228 (0%)
Query: 62 FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
F ++K+ + + L+ + + ++ +F + G VTYTTL+ L
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
++ + Q+ +G+ PD + ++ +++ +G +E+A++ F M++S + Y
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 434
Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
T+I+G AGK ++ L +S +G VKPN+ TYN ++ C+++ + EA+ ++ KM
Sbjct: 435 TMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
G PD TYNT+ A+ ++G+ + E+I EM + T G++
Sbjct: 494 DGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 541
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 84/177 (47%)
Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
M + R P + ++ +++A + D + + M + GI + + Y+IL + R +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
A LL M++ G+ P++V +++++G+C + A+ + D+M E G P+ TF T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
L+ G + A ++ M G P T+ ++ G A +L+K++
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 222/444 (50%), Gaps = 1/444 (0%)
Query: 74 SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
+ T L++ L K EA A+ + +++ G +P+LVTY ++ L + + ++++++
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251
Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
E ++ D + FN +I++ + ++++A++ F +M+ G+ P TY++LI G+
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311
Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
++ +LL M E + PNL T+N L+ A+ E EA + M + PD+ TYN+
Sbjct: 312 SDASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
+ + + D+A+++ M P+ T +I G+CK ++++ R M G
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430
Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
+ + V + LI+G D D +V M V PD++TYS +++ G ++K
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490
Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
E+FD M K+ IK D + Y+ + +G + + + +L ++ G PNVV + T+ISG
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
CS + A + KM E G PN T+ TL+ + + E+++ M++
Sbjct: 551 CSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 610
Query: 494 STFLLLAEARRATGLTKEAKRILS 517
ST L+A L K +LS
Sbjct: 611 STIGLVANMLHDGRLDKSFLDMLS 634
Score = 196 bits (497), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 225/444 (50%), Gaps = 3/444 (0%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
L+N R + A A+ +++ G++PS+VT ++LL KR + +++ Q+ E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
PD+I F +I+ EA+ +M + G P TY ++ G G + ++
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
LL+ M ++ ++ +N ++ + C +++ +A N+ +M G++P+VVTY+++ +
Sbjct: 246 NLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
G A +++ +M + PN T +I + KEGK EA + M + + P+
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 318 LVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
+ +N L+ GF + DR D ++ M PDV+TY+T++ + + ++ E+F
Sbjct: 365 IFTYNSLVNGFC-MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
+M G+ D Y+ L +G + + + A+++ M+ G P+++ ++ ++ G C++
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483
Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
G +++A+EVFD M + + ++ + T++ G +A + ++ + GV P T+
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
+ + L +EA +L K+K
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMK 567
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 218/437 (49%), Gaps = 1/437 (0%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
++ +++ L+N + +A A+ + ++E G++P +T+TTL+ L + + + +++
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
++ + G P+ + + V+N + G+ + A++ KM+ + + +NT+I
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKY 273
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
++++ L M +G ++PN+ TY+ L+ C+ ++A ++ M + P++VT
Sbjct: 274 RHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 332
Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
+N + A+ + G+ +AE++ +M + P+ T +++G+C ++ +A + M
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
P++V +N LIKGF + + E+ M + D +TY+T++ G D
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
+++F M G+ PD YSIL G + EKA E+ M +S ++ I+TT+I
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
G C G +D ++F + GV PN+ T+ T++ G R A +L+ MK G
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Query: 491 PQKSTFLLLAEARRATG 507
P T+ L A G
Sbjct: 573 PNSGTYNTLIRAHLRDG 589
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 214/437 (48%), Gaps = 1/437 (0%)
Query: 87 KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
K +A +F +++ PS+V + LL+A+ K+F+ + S+ +++ + +N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
+IN F + A+ KM + G P+ T ++L+ GY + ++V L+D M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
G +P+ T+ L+ +EA ++ +M G +P++VTY + + G+ D
Sbjct: 185 G-YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
A ++ +ME ++ + II CK + +AL + M+ G+ PN+V ++ LI
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
++L+ M E ++NP+++T++ +++A+ G + ++++DDM K I P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
D Y+ L G+ +KA+++ M+ P+VV + T+I G+C ++ E+F
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
+M G+ + T+ TL+ G A+++ + M + GV P T+ +L +
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483
Query: 507 GLTKEAKRILSKIKNKE 523
G ++A + ++ E
Sbjct: 484 GKLEKALEVFDYMQKSE 500
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 118/228 (51%), Gaps = 1/228 (0%)
Query: 62 FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
F ++K+ V + L+ + + ++ +F + G VTYTTL+ L
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
++ + Q+ +G+ PD + ++ +++ +G +E+A++ F M++S + Y
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509
Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
T+I+G AGK ++ L +S +G VKPN+ TYN ++ C+++ + EA+ ++ KM
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
G P+ TYNT+ A+ ++G+ + E+I EM + T G++
Sbjct: 569 DGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/437 (27%), Positives = 216/437 (49%), Gaps = 2/437 (0%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
+ + KL+ L ++G +E + + + +I+ G P+L TY + L + + ++
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
+ E G PD I +N +I ++ +EA KM GL P + TYNTLI GY G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
+ + +++ G V P+ TY L+ C+E A + ++ G+KP+V+ Y
Sbjct: 336 MVQLAERIVGDAVFNGFV-PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
NT+ + G +A ++ EM G+ P +T I+++G CK G + +A + M
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
G P++ FN+LI G+ + + E+L +M + V+PDV TY++++N +
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
E + M + G P+ ++IL + R ++ ++A LL M +P+ V F T+I
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 432 GWCSDGSMDRAIEVFDKMCE-HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
G+C +G +D A +F KM E + VS + T+ ++ ++E AE++ Q M +
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG 634
Query: 491 PQKSTFLLLAEARRATG 507
P T+ L+ + TG
Sbjct: 635 PDGYTYRLMVDGFCKTG 651
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 120/455 (26%), Positives = 222/455 (48%), Gaps = 7/455 (1%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
TV S +M+ L++ G +A ++ + + G P + ++T + + R ++ ++
Sbjct: 110 TVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLL 169
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
+ + G + + + + V+ F E E + F KM SG++ ST+N L++
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKK 229
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
G +E KLLD + + G V PNL TYN+ ++ C + A ++ + G KPDV+T
Sbjct: 230 GDVKECEKLLDKVIKRG-VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT 288
Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
YN + +N + +AE + +M + G++P+ T +I+GYCK G ++ A R
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV 348
Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAG 367
G P+ + LI G + LAL E + P+VI Y+T++ S G
Sbjct: 349 FNGFVPDQFTYRSLIDGLCH---EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
+ + ++ ++M + G+ P+ ++IL G + A+ L+ MI G+ P++ F
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465
Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
+I G+ + M+ A+E+ D M ++GV P++ T+ +L+ G + + E + M
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
G P TF +L E+ EA +L ++KNK
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 201/425 (47%), Gaps = 8/425 (1%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V + L+ L + K QEA+ ++ G +P TY TL+A I+
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
NG PD + ++I+ G A+ F + G+ P YNTLIKG G
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
E+ +L + MS +G + P ++T+N+LV C +++A ++ M + G PD+ T+
Sbjct: 406 MILEAAQLANEMSEKGLI-PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
N + Y+ + + A E++ M NGV P+ T +++G CK K ++ + +TM E
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
G PNL FN+L++ +DE L L++E + VNPD +T+ T+++ + G
Sbjct: 525 KGCAPNLFTFNILLESLCRYRK---LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 369 MDKCKEIFDDMGKA-GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
+D +F M +A + Y+I+ + + AE+L M++ P+ +
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
++ G+C G+++ + +M E+G P+L T ++ + + A I+ M
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Query: 488 GVHPQ 492
G+ P+
Sbjct: 702 GLVPE 706
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 110/478 (23%), Positives = 229/478 (47%), Gaps = 13/478 (2%)
Query: 88 PQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDP--DSIF 144
P +A +FN++ E G K +L TY +++ L +F ++ ++ + EN + + ++
Sbjct: 20 PMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVY 79
Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
A+ N + G ++EA++ F +M PT +YN ++ +G +++ K+ M
Sbjct: 80 VGAMKN-YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM- 137
Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
R+ + P++ ++ + ++++C A +++ M++ G + +VV Y T+ + +
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
+ E+ +M +GV T ++ CK+G +KE + + + GV PNL +NL
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
I+G + + DG ++ + E PDVITY+ ++ + + M G+
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
+PD++ Y+ L GY + + AE ++ + +GF P+ + ++I G C +G +RA+
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
+F++ G+ PN+ + TL+ G S A ++ M G+ P+ TF +L
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 505 ATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVV 562
G +A ++ + +K + + + L H +T N L+I +V+
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPD--------IFTFNILIHGYSTQLKMENALEILDVM 487
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 121/283 (42%), Gaps = 35/283 (12%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V++ L+N L + G +A + +I G+ P + T+ L+ + Q + + I+
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN---------- 181
+ +NG+DPD +N+++N ++ E+ M+T+ M E G P T+N
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYR 545
Query: 182 -------------------------TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
TLI G+ G + + L M V + TY
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY 605
Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
N+++ A+ + N+T A + +M + PD TY + + + G + + ++EM
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665
Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
NG P+ T G +I+ C E ++ EA M + G+ P V
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/179 (18%), Positives = 64/179 (35%), Gaps = 39/179 (21%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
L++ + G A +F + E S TY ++ A T + + ++ +
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
+ PD + +++ F ++GN+ +M E+G P+ +T +I
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVIN----------- 680
Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
C E + EA ++H+M G+ P+ V NTI
Sbjct: 681 -------------------------CLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTIC 712
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 210/419 (50%), Gaps = 1/419 (0%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
L+ + G Q++ IF + G PS+ T +L ++ S+ S + ++ +
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 188
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
+ PD FN +IN G+ E++ KM++SG PT TYNT++ Y G+ + ++
Sbjct: 189 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 248
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
+LLD M +G V ++ TYN+L+ C I + + ++ M + P+ VTYNT+
Sbjct: 249 ELLDHMKSKG-VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 307
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
++ G+ A +++ EM G+ PN T +I G+ EG KEAL+ M+ G+ P+
Sbjct: 308 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 367
Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
V + +L+ G + + D MK V ITY+ +++ GF+D+ + +
Sbjct: 368 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 427
Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
+M K GI PD YS L G+ + + A+E++ + G PN +I++T+I C G
Sbjct: 428 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487
Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
+ AI +++ M G + + TF L+ +A + AEE ++ M + G+ P +F
Sbjct: 488 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 546
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 203/423 (47%), Gaps = 1/423 (0%)
Query: 64 MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
+ ++ C V + L+N L G +++ + + + G+ P++VTY T+L + RF
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
+ ++ ++ G+D D +N +I+ S + + M++ + P TYNTL
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 304
Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
I G+ GK + +LL+ M G + PN T+N L+ +E N EA + + M A G
Sbjct: 305 INGFSNEGKVLIASQLLNEMLSFG-LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363
Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
+ P V+Y + +N E D A + M+ NGV T +I G CK G + EA+
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423
Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
M + G+ P++V ++ LI GF ++ E++ + ++P+ I YST++
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 483
Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
G + + I++ M G D +++L + + +AEE + M G PN
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543
Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
V F +I+G+ + G +A VFD+M + G P T+ +L+ G + AE+ L+
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603
Query: 484 MKA 486
+ A
Sbjct: 604 LHA 606
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 178/363 (49%), Gaps = 1/363 (0%)
Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
P+ VTY TL+ + + + +++++ G+ P+ + FNA+I+ GN +EA+
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
F+ M+ GLTP+ +Y L+ G + + + M R G + TY ++ C
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI-TYTGMIDGLC 414
Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
+ EA ++++M+ G+ PD+VTY+ + + + G A+E++ + G+ PNG
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474
Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
+I C+ G +KEA+R M G + FN+L+ + +E + M
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534
Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
+ P+ +++ ++N + +G K +FD+M K G P Y L KG +
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594
Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
+AE+ L ++ + V++ T+++ C G++ +A+ +F +M + + P+ T+ +L
Sbjct: 595 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 654
Query: 465 MWG 467
+ G
Sbjct: 655 ISG 657
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 103/456 (22%), Positives = 202/456 (44%), Gaps = 37/456 (8%)
Query: 76 TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
T +++ L + G EA + N + + G P +VTY+ L+ RF + I+ ++
Sbjct: 407 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 466
Query: 136 NGMDPDSIF-----------------------------------FNAVINAFSESGNMEE 160
G+ P+ I FN ++ + ++G + E
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 526
Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
A + M G+ P T +++ LI GYG +G+ ++ + D M++ G+ P TY L+
Sbjct: 527 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH-HPTFFTYGSLL 585
Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
+ C ++ EA + + A D V YNT+ TA ++G +A + EM +
Sbjct: 586 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 645
Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYG-VHPNLVIFNLLIKGFVEIMDRDGVDE 339
P+ T +ISG C++GK A+ FA+ + G V PN V++ + G +
Sbjct: 646 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 705
Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
M PD++T + +++ +S G ++K ++ +MG P+ Y+IL GY
Sbjct: 706 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 765
Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
+ ++ + L ++I +G P+ + +++ G C ++ +++ GV +
Sbjct: 766 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 825
Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
TF L+ + A +++++M + G+ K T
Sbjct: 826 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 861
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/500 (21%), Positives = 203/500 (40%), Gaps = 84/500 (16%)
Query: 74 SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-------IQKRFNSI 126
S L+N G+ +A ++F+ + + GH P+ TY +LL L +K S+
Sbjct: 545 SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 604
Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
H++ + V D++ +N ++ A +SGN+ +A+ F +M + + P + TY +LI G
Sbjct: 605 HAVPAAV-------DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657
Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
GK ++ GNV PN Y V +M G P
Sbjct: 658 LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 717
Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEH------------------------------ 276
D+VT N + Y++ G+ ++ +++ EM +
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777
Query: 277 -----NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK----- 326
NG+ P+ TC ++ G C+ ++ L+ + GV + FN+LI
Sbjct: 778 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 837
Query: 327 -------GFVEIM-------DRDGVDEVLALM------KEFR----------VNPDVITY 356
V++M D+D D +++++ +E R ++P+ Y
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897
Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
++N G + + ++M I P A S + + + + ++A LL M++
Sbjct: 898 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 957
Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
P + FTT++ C +G++ A+E+ M G+ +L ++ L+ G
Sbjct: 958 MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1017
Query: 477 AEEILQIMKAFGVHPQKSTF 496
A E+ + MK G +T+
Sbjct: 1018 AFELYEEMKGDGFLANATTY 1037
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/442 (20%), Positives = 190/442 (42%), Gaps = 41/442 (9%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM--SQVEE 135
L+ ++ + G +A ++F +++ P TYT+L++ L ++ ++ +I+ + E
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC--RKGKTVIAILFAKEAEA 676
Query: 136 NG-MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
G + P+ + + ++ ++G + + +M G TP T N +I GY GK E
Sbjct: 677 RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 736
Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT---- 250
++ LL M + N PNL TYN+L+ + K+++ ++ + + +G+ PD +T
Sbjct: 737 KTNDLLPEMGNQ-NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795
Query: 251 -------------------------------YNTIATAYAQNGEADQAEEVIVEMEHNGV 279
+N + + NGE + A +++ M G+
Sbjct: 796 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855
Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
+ TC ++S + + +E+ M + G+ P + LI G + D
Sbjct: 856 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 915
Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
V M ++ P + S ++ A + G D+ + M K + P +++ L
Sbjct: 916 VKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCC 975
Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
+ +A EL + M G ++V + +I+G C+ G M A E++++M G N
Sbjct: 976 KNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANAT 1035
Query: 460 TFETLMWGYSEARQPWRAEEIL 481
T++ L+ G + +I+
Sbjct: 1036 TYKALIRGLLARETAFSGADII 1057
Score = 113 bits (282), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 145/318 (45%)
Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
LM+ N Y++L+R + E I ++ + M G P V T N I + ++
Sbjct: 112 LMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS 171
Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
GE + EM + P+ T I+I+ C EG +++ + M++ G P +V +
Sbjct: 172 GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 231
Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
N ++ + + E+L MK V+ DV TY+ +++ + + K + DM K
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 291
Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
I P+ Y+ L G+ E + A +LL M+ G PN V F +I G S+G+
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351
Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
A+++F M G++P+ ++ L+ G + + A MK GV + T+ + +
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411
Query: 502 ARRATGLTKEAKRILSKI 519
G EA +L+++
Sbjct: 412 GLCKNGFLDEAVVLLNEM 429
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 111/238 (46%)
Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
I+I Y +EG I+++L R M YG +P++ N ++ V+ + V L M +
Sbjct: 128 ILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR 187
Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
++ PDV T++ ++N G +K + M K+G P Y+ + Y ++ + A
Sbjct: 188 KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 247
Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
ELL M G +V + +I C + + + M + + PN T+ TL+ G
Sbjct: 248 IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 307
Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
+S + A ++L M +FG+ P TF L + + G KEA ++ ++ K T
Sbjct: 308 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 6/173 (3%)
Query: 342 ALMKEFRV---NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
ALM +R+ NP V Y ++ + G + EIF MG G P + + +
Sbjct: 111 ALMTTYRLCNSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 168
Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
V+ E L M++ P+V F +I+ C++GS +++ + KM + G +P +
Sbjct: 169 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI 228
Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF-LLLAEARRATGLTK 510
T+ T++ Y + + A E+L MK+ GV T+ +L+ + R+ + K
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 281
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 97/210 (46%), Gaps = 7/210 (3%)
Query: 64 MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
++K++C +M ++N + QE++ + + + + G P Y L+ L
Sbjct: 857 LDKDTCD---AMVSVLN---RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDI 910
Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
+ + ++ + + P ++ +A++ A ++ G +EA M + L PT +++ TL
Sbjct: 911 KTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTL 970
Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
+ G E+++L +MS G +K +L +YNVL+ C + ++ A+ + +M G
Sbjct: 971 MHLCCKNGNVIEALELRVVMSNCG-LKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDG 1029
Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
+ TY + A ++I++
Sbjct: 1030 FLANATTYKALIRGLLARETAFSGADIILK 1059
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 199 bits (506), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 214/427 (50%), Gaps = 6/427 (1%)
Query: 87 KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
K +A +F +++ PS+ + LL+A+ K+F+ + S+ +++ G+ + +N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
+IN F + A+ KM + G P+ T ++L+ GY + ++V L+D M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
G +P+ T+ L+ +EA ++ +M G +P++VTY + + G+ D
Sbjct: 185 G-YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
A ++ +ME ++ N +I CK +AL M+ GV PN++ ++ LI
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
+L+ M E ++NP+V+T++ +++A+ G + + ++++D+M K I P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
D YS L G+ ++A+ + MI PNVV + T+I+G+C +D +E+F
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
+M + G+ N T+ TL+ G+ +AR A+ + + M + GVHP T+ L +
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD----- 478
Query: 507 GLTKEAK 513
GL K K
Sbjct: 479 GLCKNGK 485
Score = 192 bits (487), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 219/437 (50%), Gaps = 1/437 (0%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
++ KL++++ + K ++ + G +L TY L+ + + + +++
Sbjct: 84 SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
++ + G +P + ++++N + + +A+ +M E G P T T+ TLI G +
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
K E+V L+D M + G +PNL TY V+V C +I A+N+++KM A+ ++ +VV
Sbjct: 204 NKASEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
Y+T+ + + D A + EME+ GV+PN T +IS C + +A R M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
E ++PN+V FN LI FV+ +++ M + ++PD+ TYS+++N + +D
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
+ K +F+ M P+ Y+ L G+ + + ++ EL M + G N V +TT+I
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
G+ D A VF +M GV PN+ T+ TL+ G + + +A + + ++ +
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 491 PQKSTFLLLAEARRATG 507
P T+ ++ E G
Sbjct: 503 PTIYTYNIMIEGMCKAG 519
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 207/385 (53%), Gaps = 3/385 (0%)
Query: 74 SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
+ T L++ L K EA A+ + +++ G +P+LVTY ++ L + + ++++++
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251
Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
E ++ + + ++ VI++ + + ++A++ F +M+ G+ P TY++LI +
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311
Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
++ +LL D++ R+ + PN+ T+N L+ A+ E + EA + +M + PD+ TY+
Sbjct: 312 SDASRLLSDMIERK--INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
++ + + D+A+ + M PN T +I+G+CK +I E + R M +
Sbjct: 370 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
G+ N V + LI GF + D D V M V+P+++TY+T+++ G ++K
Sbjct: 430 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
+F+ + ++ ++P + Y+I+ +G + + E +L ++ G P+V+I+ T+ISG
Sbjct: 490 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISG 549
Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPN 457
+C G + A +F KM E G P+
Sbjct: 550 FCRKGLKEEADALFRKMREDGPLPD 574
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 209/425 (49%), Gaps = 1/425 (0%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
++ +++ L+N + +A A+ + ++E G++P +T+TTL+ L + + + +++
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
++ + G P+ + + V+N + G+++ A + KM+ + + Y+T+I
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKY 273
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
++++ L M +G V+PN+ TY+ L+ CN + ++A ++ M + P+VVT
Sbjct: 274 RHEDDALNLFTEMENKG-VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVT 332
Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
+N + A+ + G+ +AE++ EM + P+ T +I+G+C ++ EA M
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
PN+V +N LI GF + D E+ M + + + +TY+T+++ + A D
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
+ +F M G+ P+ Y+ L G + + EKA + + S P + + +I
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
G C G ++ ++F + GV P++ + T++ G+ A+ + + M+ G
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPL 572
Query: 491 PQKST 495
P T
Sbjct: 573 PDSGT 577
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 1/184 (0%)
Query: 64 MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
++K+ V + L+N + + E +F + + G + VTYTTL+ +
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
++ + Q+ +G+ P+ + +N +++ ++G +E+AM F ++ S + PT TYN +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511
Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
I+G AGK E+ L +S +G VKP++ YN ++ +C + EA + KM G
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKG-VKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Query: 244 MKPD 247
PD
Sbjct: 571 PLPD 574
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 3/187 (1%)
Query: 337 VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
+D+ + L M + R P + ++ +++A + D + + M + GI + + Y+I
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
L + R + A LL M++ G+ P++V +++++G+C + A+ + D+M E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
P+ TF TL+ G + A ++ M G P T+ ++ G A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 514 RILSKIK 520
+L+K++
Sbjct: 246 NLLNKME 252
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 224/480 (46%), Gaps = 38/480 (7%)
Query: 74 SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
+ + L+N G+ EA A+ + ++E +P LVT +TL+ L ++ R + ++ ++
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE----------------------- 170
E G PD + + V+N +SGN A+D F KM+E
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261
Query: 171 ------------SGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYN 217
G+ TY++LI G GK ++ K+L +++ R N+ P++ T++
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR--NIIPDVVTFS 319
Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
L+ + E + EA + ++M G+ PD +TYN++ + + +A ++ M
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
G +P+ T I+I+ YCK ++ + +R R + G+ PN + +N L+ GF + +
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
E+ M V P V+TY +++ G ++K EIF+ M K+ + Y+I+ G
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 499
Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
+ + A L ++ + G P+VV + +I G C GS+ A +F KM E G +P+
Sbjct: 500 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559
Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
T+ L+ + + E+++ MK G ST ++ + L K +LS
Sbjct: 560 DFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDMLS 619
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 226/449 (50%), Gaps = 2/449 (0%)
Query: 77 KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
+L N +++ K +A +F ++I+ P+ + + L +A+ K+++ + +E N
Sbjct: 41 RLRNGIVDI-KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN 99
Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
G++ D +IN + + A + + G P T T++TL+ G+ + G+ E+
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
V L+D M E +P+L T + L+ C + ++EA ++ +M G +PD VTY +
Sbjct: 160 VALVDRMV-EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218
Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
++G + A ++ +ME ++ + I+I CK+G +AL M+ G+
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278
Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
++V ++ LI G D ++L M + PDV+T+S +++ + G + + KE++
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338
Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
++M GI PD Y+ L G+ +E +A ++ M+ G P++V ++ +I+ +C
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398
Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
+D + +F ++ G+ PN T+ TL+ G+ ++ + A+E+ Q M + GV P T+
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 497 LLLAEARRATGLTKEAKRILSKIKNKERT 525
+L + G +A I K++ T
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMT 487
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 130/256 (50%), Gaps = 1/256 (0%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V + + L++ ++ GK EA+ ++N +I G P +TY +L+ + + + +
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
+ G +PD + ++ +IN++ ++ +++ M F ++ GL P T TYNTL+ G+ +G
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
K + +L M G V P++ TY +L+ C+ + +A + KM S M + Y
Sbjct: 435 KLNAAKELFQEMVSRG-VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
N I + D A + + GV+P+ T ++I G CK+G + EA R MKE
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553
Query: 312 YGVHPNLVIFNLLIKG 327
G P+ +N+LI+
Sbjct: 554 DGCTPDDFTYNILIRA 569
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 148/317 (46%), Gaps = 1/317 (0%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V + + L+ L GK + + +I P +VT++ L+ + + + +
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
++ G+ PD+I +N++I+ F + + EA F M G P TY+ LI Y A
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
+ ++ ++L +S +G + PN TYN LV +C + A + +M + G+ P VVTY
Sbjct: 400 RVDDGMRLFREISSKGLI-PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
+ NGE ++A E+ +M+ + + III G C K+ +A ++ +
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
GV P++V +N++I G + D + MKE PD TY+ ++ A +
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS 578
Query: 372 CKEIFDDMGKAGIKPDA 388
E+ ++M G D+
Sbjct: 579 SVELIEEMKVCGFSADS 595
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 136/304 (44%), Gaps = 6/304 (1%)
Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
+Y +R + + +A ++ M S P + +N + +A A+ + D M
Sbjct: 37 SYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGM 96
Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
E NG++ + T I+I+ YC++ K+ A + G P+ + F+ L+ GF
Sbjct: 97 ELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCL---E 153
Query: 335 DGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
V E +AL M E + PD++T ST++N G + + + D M + G +PD Y
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213
Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
+ + A +L M E +VV ++ +I C DGS D A+ +F++M
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 273
Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
G+ ++ T+ +L+ G + ++L+ M + P TF L + G E
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 512 AKRI 515
AK +
Sbjct: 334 AKEL 337
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/472 (26%), Positives = 228/472 (48%), Gaps = 15/472 (3%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
L++SL + + EA + + G P T+ ++ L R N +++++ G
Sbjct: 258 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 317
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
PD I + ++N + G ++ A D F+++ + P +NTLI G+ G+ +++
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAK 373
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
+L M + P++ TYN L+ + E + A V+H M G KP+V +Y +
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
+ + G+ D+A V+ EM +G++PN +IS +CKE +I EA+ R M G P+
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493
Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKE 374
+ FN LI G E+ D + L L+++ V + +TY+T++NA+ G + + ++
Sbjct: 494 VYTFNSLISGLCEV---DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 550
Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
+ ++M G D Y+ L KG R E +KA L M+ G P+ + +I+G C
Sbjct: 551 LVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC 610
Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
G ++ A+E +M G +P++ TF +L+ G A + + + ++A G+ P
Sbjct: 611 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 670
Query: 495 TFLLLAEARRATGLTKEAKRILSK-----IKNKERTNEMEAEEDIPVESLER 541
TF L G +A +L + RT + + IP E+L+R
Sbjct: 671 TFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 207/458 (45%), Gaps = 44/458 (9%)
Query: 100 EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM--------------------- 138
+ G++ S Y L+ L F +I ++ Q+++ G+
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG 163
Query: 139 ---------------DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
+P +N V+ + A + F+ M + PT T+ +
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223
Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
+K + + + ++ LL M++ G V PN Y L+ + + EA ++ +M G
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCV-PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282
Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
PD T+N + + ++A +++ M G P+ T G +++G CK G++ A
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342
Query: 304 R-FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA-LMKEFRVNPDVITYSTIMN 361
F R K P +VIFN LI GFV D VL+ ++ + + PDV TY++++
Sbjct: 343 DLFYRIPK-----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
+ G + E+ DM G KP+ ++Y+IL G+ + + ++A +L M G P
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
N V F +IS +C + + A+E+F +M G P++ TF +L+ G E + A +L
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517
Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
+ M + GV T+ L A G KEA+++++++
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/450 (24%), Positives = 213/450 (47%), Gaps = 7/450 (1%)
Query: 65 NKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
N SC T +S ++ L+ + A +F +++ P+L T+ ++ A
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEI 233
Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
+S S++ + ++G P+S+ + +I++ S+ + EA+ +M G P T+N +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293
Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
I G + E+ K+++ M G P+ TY L+ C + A ++ +++
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRG-FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP--- 349
Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN-GVQPNGRTCGIIISGYCKEGKIKEA 302
KP++V +NT+ + +G D A+ V+ +M + G+ P+ T +I GY KEG + A
Sbjct: 350 -KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
L M+ G PN+ + +L+ GF ++ D VL M + P+ + ++ +++A
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
+ + + EIF +M + G KPD + ++ L G E + A LL MI G N
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
V + T+I+ + G + A ++ ++M G + T+ +L+ G A + +A + +
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
M G P + +L +G+ +EA
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEA 618
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 2/228 (0%)
Query: 64 MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
M ++ C+ V + L++ L E + + A + ++I G + VTY TL+ A +
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
+++++ G D I +N++I +G +++A F KM G P+ + N
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
LI G +G EE+V+ M G+ P++ T+N L+ C I + + K+ A
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGST-PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663
Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
G+ PD VT+NT+ + + G A ++ E +G PN RT I++
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 101/253 (39%), Gaps = 9/253 (3%)
Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
NG + + ++I G+ K R MK+ G+ +F +++ + D+
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDY----DKA 159
Query: 336 GV-DEVLALMKEFR----VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
G + LM E R P +Y+ ++ + +F DM I P
Sbjct: 160 GFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFT 219
Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
+ ++ K + E + A LL M + G PN VI+ T+I ++ A+++ ++M
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279
Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
G P+ +TF ++ G + + A +++ M G P T+ L G
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339
Query: 511 EAKRILSKIKNKE 523
AK + +I E
Sbjct: 340 AAKDLFYRIPKPE 352
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 224/444 (50%), Gaps = 4/444 (0%)
Query: 74 SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
+ T L++ L K EA A+ + +++ G +P LVTY T++ L + + ++++++
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM 249
Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
E + + + FN +I++ + ++E A+D F +M+ G+ P TYN+LI G+
Sbjct: 250 EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRW 309
Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
++ +LL M E + PN+ T+N L+ A+ E + EA + +M + PD +TYN
Sbjct: 310 SDASRLLSNM-LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368
Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
+ + + D+A+++ M PN +T +I+G+CK ++++ + R M + G
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428
Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
+ N V + +I+GF + D D V M RV D++TYS +++ + G +D
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTAL 488
Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
IF + K+ ++ + Y+ + +G + + +A +L ++ P+VV + T+ISG
Sbjct: 489 VIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGL 545
Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
CS + A ++F KM E G PN T+ TL+ + E+++ M++ G
Sbjct: 546 CSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDA 605
Query: 494 STFLLLAEARRATGLTKEAKRILS 517
ST L+ L K +LS
Sbjct: 606 STISLVTNMLHDGRLDKSFLNMLS 629
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 214/432 (49%), Gaps = 6/432 (1%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
+ +++ L+N + +A A+ + ++E G+KP T+TTL+ L + + + +++
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVD 212
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
Q+ + G PD + + V+N + G+++ A++ KM+ + + +NT+I
Sbjct: 213 QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYR 272
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
E +V L M +G ++PN+ TYN L+ CN ++A ++ M + P+VVT+
Sbjct: 273 HVEVAVDLFTEMETKG-IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF 331
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
N + A+ + G+ +AE++ EM + P+ T ++I+G+C ++ EA + + M
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS 391
Query: 312 YGVHPNLVIFNLLIKGFVEIMD-RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
PN+ +N LI GF + DGV E+ M + + + +TY+TI+ + AG D
Sbjct: 392 KDCLPNIQTYNTLINGFCKCKRVEDGV-ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
+ +F M + D YSIL G + + A + + +S N+ I+ T+I
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
G C G + A ++F C + P++ T+ T++ G R A+++ + MK G
Sbjct: 511 EGMCKAGKVGEAWDLF---CSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Query: 491 PQKSTFLLLAEA 502
P T+ L A
Sbjct: 568 PNSGTYNTLIRA 579
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 201/397 (50%), Gaps = 1/397 (0%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
++ KL++++ + K + ++ + G L TY+ + + + + +++
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
+++ + G +PD + ++++N + S + +A+ +M E G P T T+ TLI G +
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
K E+V L+D M + G +P+L TY +V C +I A N+++KM A+ +K +VV
Sbjct: 202 NKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
+NTI + + + A ++ EME G++PN T +I+ C G+ +A R M
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
E ++PN+V FN LI F + +++ M + ++PD ITY+ ++N + +D
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
+ K++F M P+ Y+ L G+ + + E EL M + G N V +TTII
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
G+ G D A VF +M + V ++ T+ L+ G
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 218/446 (48%), Gaps = 1/446 (0%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
L N L + K +A +F ++++ PS+V + LL+A+ +F + S+ Q++ G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
+ D ++ IN F + A+ KM + G P T ++L+ GY + + ++V
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
L+D M G KP+ T+ L+ +EA ++ +M G +PD+VTY T+
Sbjct: 174 ALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
+ G+ D A ++ +ME ++ N II CK ++ A+ M+ G+ PN
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
+V +N LI +L+ M E ++NP+V+T++ +++A+ G + + +++ +
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
+M + I PD Y++L G+ ++A+++ M+ PN+ + T+I+G+C
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
++ +E+F +M + G+ N T+ T++ G+ +A A+ + + M + V T+
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYS 472
Query: 498 LLAEARRATGLTKEAKRILSKIKNKE 523
+L + G A I ++ E
Sbjct: 473 ILLHGLCSYGKLDTALVIFKYLQKSE 498
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 170/373 (45%), Gaps = 42/373 (11%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V + L+N L G+ +A + +N++E P++VT+ L+ A + + +
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
++ + +DPD+I +N +IN F ++EA F M P TYNTLI G+
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
+ E+ V+L MS+ G V + VTY
Sbjct: 413 RVEDGVELFREMSQRGLV------------------------------------GNTVTY 436
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
TI + Q G+ D A+ V +M N V + T I++ G C GK+ AL + +++
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
+ N+ I+N +I+G M + G V E L + PDV+TY+T+++ + +
Sbjct: 497 SEMELNIFIYNTMIEG----MCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQ 552
Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
+ ++F M + G P++ Y+ L + +R+ + + EL+ M SGF + +++
Sbjct: 553 EADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI-SLV 611
Query: 431 SGWCSDGSMDRAI 443
+ DG +D++
Sbjct: 612 TNMLHDGRLDKSF 624
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 113/228 (49%), Gaps = 4/228 (1%)
Query: 62 FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
F ++K+ +++ L+N + + ++ +F + + G + VTYTT++
Sbjct: 388 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
+S + Q+ N + D + ++ +++ G ++ A+ F +++S + YN
Sbjct: 448 DCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYN 507
Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
T+I+G AGK E+ L +S +KP++ TYN ++ C+++ + EA ++ KM
Sbjct: 508 TMIEGMCKAGKVGEAWDLFCSLS----IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563
Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
G P+ TYNT+ A ++ + + E+I EM +G + T ++
Sbjct: 564 DGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLV 611
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/448 (26%), Positives = 221/448 (49%), Gaps = 2/448 (0%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
++ ++ L+N + EA A+ + ++E G++P VT+TTL+ L + + +++
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
++ G PD + + AVIN + G + A++ KM++ + YNT+I G
Sbjct: 204 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKY 263
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
+++ L + M +G +KP++ TYN L+ CN ++A ++ M + PD+V
Sbjct: 264 KHMDDAFDLFNKMETKG-IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVF 322
Query: 251 YNTIATAYAQNGEADQAEEVIVEM-EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
+N + A+ + G+ +AE++ EM + P+ +I G+CK +++E + R M
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
+ G+ N V + LI GF + D D V M V+PD++TY+ +++ G +
Sbjct: 383 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNV 442
Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
+ +F+ M K +K D Y+ + + + + E +L ++ G PNVV +TT+
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502
Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
+SG+C G + A +F +M E G PN T+ TL+ + E+++ M++ G
Sbjct: 503 MSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGF 562
Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILS 517
STF L+ L K +LS
Sbjct: 563 AGDASTFGLVTNMLHDGRLDKSFLDMLS 590
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 204/431 (47%), Gaps = 2/431 (0%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
+N R + A AI +++ G+ PS+VT +LL R + +++ Q+ E G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
PD++ F +++ + EA+ +M G P TY +I G G+P+ ++
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
LL+ M + G ++ ++ YN ++ C K++ +A+++ +KM G+KPDV TYN + +
Sbjct: 236 NLLNKMEK-GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM-KEYGVHP 316
G A ++ +M + P+ +I + KEGK+ EA + M K P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
++V +N LIKGF + + EV M + + + +TY+T+++ + A D + +F
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414
Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
M G+ PD Y+IL G E A + M + ++V +TT+I C
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474
Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
G ++ ++F + GV PN+ T+ T+M G+ A+ + MK G P T+
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534
Query: 497 LLLAEARRATG 507
L AR G
Sbjct: 535 NTLIRARLRDG 545
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 122/525 (23%), Positives = 242/525 (46%), Gaps = 57/525 (10%)
Query: 42 KKQLYSNSKPTDSQPQTHCSFCMNK-------ESCRTVRSMTKLMNSLIERGKPQEAQAI 94
KK L+ ++ P+T + C + + CR L +++ K +A +
Sbjct: 10 KKCLHRHTVLLKGNPRT--TLCWERSFAGASSDDCRE-----NLSRKVLQDLKLDDAIGL 62
Query: 95 FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD--------------- 139
F ++++ PS+V ++ LL+A+ +F+ + S+ Q++ G+
Sbjct: 63 FGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCR 122
Query: 140 --------------------PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
P + N+++N F + EA+ +M E G P T T
Sbjct: 123 RSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVT 182
Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
+ TL+ G K E+V L++ M +G +P+L TY ++ C A N+++KM
Sbjct: 183 FTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241
Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
++ DVV YNTI + D A ++ +ME G++P+ T +IS C G+
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVE----IMDRDGVDEVLALMKEFRVNPDVIT 355
+A R M E ++P+LV FN LI FV+ + DE ++K PDV+
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE---MVKSKHCFPDVVA 358
Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
Y+T++ + +++ E+F +M + G+ + Y+ L G+ + ++ + A+ + M+
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
G HP+++ + ++ G C++G+++ A+ VF+ M + + ++ T+ T++ +A +
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
++ + GV P T+ + GL +EA + ++K
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 103/234 (44%)
Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
++S K K + M+ G+ NL +++ I F +L M +
Sbjct: 81 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLG 140
Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
P ++T ++++N + + + + D M + G +PD ++ L G + + +A
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200
Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
L+ M+ G P++V + +I+G C G D A+ + +KM + + ++ + T++ G
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260
Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
+ + A ++ M+ G+ P T+ L G +A R+LS + K
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK 314
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 337 VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
+D+ + L M + R P ++ +S +++A + D + + M GI + + YSI
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
+ R + A +L M++ G+ P++V ++++G+C + A+ + D+M E G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
P+ TF TL+ G + + A +++ M G P T+ GL K +
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY-----GAVINGLCKRGE 230
Query: 514 RILS-KIKNKERTNEMEAE 531
L+ + NK ++EA+
Sbjct: 231 PDLALNLLNKMEKGKIEAD 249
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 227/454 (50%), Gaps = 7/454 (1%)
Query: 61 SFCMNKE-SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
SFC + S +T +++ + + + +A +F + + PS++ ++ LL+A+
Sbjct: 31 SFCRRRAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAK 90
Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
+F+ + S ++E G+ + +N +IN F + A+ KM + G P T
Sbjct: 91 MNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVT 150
Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
N+L+ G+ + ++V L+D M G KP+ T+ L+ +EA ++ +M
Sbjct: 151 LNSLLNGFCHGNRISDAVALVDQMVEMG-YKPDTVTFTTLIHGLFLHNKASEAVALIDRM 209
Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
G +PD+VTY + + G+ D A ++ +ME ++ N +I CK
Sbjct: 210 VQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 269
Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
+AL M+ GV PN++ ++ LI +L+ M E ++NP+++T+S +
Sbjct: 270 DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSAL 329
Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
++A+ G + K ++++++M K I P+ YS L G+ +A+++L MI
Sbjct: 330 IDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDC 389
Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
PNVV + T+I+G+C +D+ +E+F +M + G+ N T+ TL+ G+ +AR A+
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 449
Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
+ + M + GVHP T+ +L + GL K K
Sbjct: 450 VFKQMVSVGVHPNILTYNILLD-----GLCKNGK 478
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 155/369 (42%), Gaps = 42/369 (11%)
Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
+++A+ F M +S P+ ++ L+ K + + + M G + NL TYN
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILG-ISHNLYTYN 117
Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
+L+ +C ++ A ++ KM G +PD+VT N++
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSL----------------------- 154
Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
++G+C +I +A+ M E G P+ V F LI G + +
Sbjct: 155 ------------LNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHG---LFLHNKA 199
Query: 338 DEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
E +AL M + PD++TY ++N G D + + M A I+ + YS +
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
+ + + A L M G PNV+ ++++IS C+ G A + M E +
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
+PNL TF L+ + + + +AE++ + M + P T+ L EAK+
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379
Query: 515 ILSKIKNKE 523
+L + K+
Sbjct: 380 MLELMIRKD 388
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 3/192 (1%)
Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
+E+ D G+ V+A + F P +I +S +++A + D + M GI +
Sbjct: 57 IELDDAIGLFGVMAQSRPF---PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNL 113
Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
+ Y+IL + R A LL M++ G+ P++V ++++G+C + A+ + D+
Sbjct: 114 YTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQ 173
Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
M E G P+ TF TL+ G + A ++ M G P T+ + G
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD 233
Query: 509 TKEAKRILSKIK 520
T A +L+K++
Sbjct: 234 TDLALNLLNKME 245
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 63/129 (48%)
Query: 64 MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
+ K+ V + L+N + + + +F + + G + VTYTTL+ +
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
++ + Q+ G+ P+ + +N +++ ++G + +AM F ++ S + P TYN +
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504
Query: 184 IKGYGIAGK 192
I+G AGK
Sbjct: 505 IEGMCKAGK 513
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 192 bits (489), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 216/428 (50%), Gaps = 12/428 (2%)
Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
G+K S ++ L+ AL + R + + ++ + P+ FN VINA ++G M +A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGY---GIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
D MK G +P +YNTLI GY G GK ++ +L M E +V PNL T+N+
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV-ENDVSPNLTTFNI 301
Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
L+ + + N+ + V +M +KP+V++YN++ G+ +A + +M G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361
Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
VQPN T +I+G+CK +KEAL ++K G P ++N+LI + ++ +D
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKL---GKID 418
Query: 339 EVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
+ AL +E + PDV TY+ ++ G ++ K++FD + G+ PD + IL
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILM 477
Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM-CEHGV 454
+GY R+ E KA LL M + G P + + ++ G+C +G++ A + +M E +
Sbjct: 478 EGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL 537
Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
N+ ++ L+ GYS+ + A +L M G+ P + T+ ++ E G + +
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEG 597
Query: 515 ILSKIKNK 522
L + K
Sbjct: 598 HLFNVSTK 605
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 181/362 (50%), Gaps = 6/362 (1%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL---AALTIQKRFNSIHS 128
V + ++N+L + GK +A+ + ++ G P++V+Y TL+ L + +
Sbjct: 223 VFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADA 282
Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
++ ++ EN + P+ FN +I+ F + N+ +M F +M + + P +YN+LI G
Sbjct: 283 VLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLC 342
Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
GK E++ + D M G V+PNL TYN L+ +C + EA ++ + G P
Sbjct: 343 NGGKISEAISMRDKMVSAG-VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTT 401
Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
YN + AY + G+ D + EME G+ P+ T +I+G C+ G I+ A +
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461
Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
+ G+ P+LV F++L++G+ + +L M + + P +TY+ +M + G
Sbjct: 462 LTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGN 520
Query: 369 MDKCKEIFDDMGKA-GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
+ + M K ++ + +Y++L +GY ++ + E A LL M+E G PN + +
Sbjct: 521 LKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYE 580
Query: 428 TI 429
+
Sbjct: 581 IV 582
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 207/435 (47%), Gaps = 28/435 (6%)
Query: 113 LLAALTIQKRFNSIHSIMSQVEENGMDP------------DSIFFNAVIN-----AFSES 155
LL +L KR++ I S + NG D D++ N++I A++ +
Sbjct: 107 LLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANN 166
Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
E + F + G + + L+ + + + M R ++PN+ T
Sbjct: 167 SRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRR-KIQPNVFT 225
Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ---NGEADQAEEVIV 272
+NV++ A C + +A +VM M G P+VV+YNT+ Y + NG+ +A+ V+
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
EM N V PN T I+I G+ K+ + +++ + M + V PN++ +N LI G +
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING---LC 342
Query: 333 DRDGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
+ + E +++ M V P++ITY+ ++N + + + ++F + G P
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 402
Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
Y++L Y + + + L M G P+V + +I+G C +G+++ A ++FD++
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
G+ P+L TF LM GY + +A +L+ M G+ P+ T+ ++ + G
Sbjct: 463 TSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNL 521
Query: 510 KEAKRILSKIKNKER 524
K A + ++++ + R
Sbjct: 522 KAATNMRTQMEKERR 536
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 150/277 (54%), Gaps = 3/277 (1%)
Query: 94 IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
+F +++ KP++++Y +L+ L + + S+ ++ G+ P+ I +NA+IN F
Sbjct: 318 VFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFC 377
Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
++ ++EA+D F +K G PTT YN LI Y GK ++ L + M REG + P++
Sbjct: 378 KNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG-IVPDV 436
Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
TYN L+ C NI A + ++ + G+ PD+VT++ + Y + GE+ +A ++ E
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKE 495
Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGFVEIM 332
M G++P T I++ GYCKEG +K A M KE + N+ +N+L++G+ +
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555
Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
+ + +L M E + P+ ITY + GF+
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFV 592
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 168/339 (49%), Gaps = 19/339 (5%)
Query: 86 GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
GK +A A+ ++E P+L T+ L+ + ++ + + P+ I +
Sbjct: 275 GKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISY 334
Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
N++IN G + EA+ KM +G+ P TYN LI G+ +E++ + +
Sbjct: 335 NSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKG 394
Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
+G V P R YN+L+ A+C I + + + +M G+ PDV TYN + +NG +
Sbjct: 395 QGAV-PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
A+++ ++ G+ P+ T I++ GYC++G+ ++A + M + G+ P + +N+++
Sbjct: 454 AAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVM 512
Query: 326 KGFVEIMDRDGVDEVLALM-KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
KG+ + + + M KE R+ +V +Y+ ++ +S G ++ + ++M + G+
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572
Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
P+ Y I V+E+ M++ GF P++
Sbjct: 573 VPNRITYEI-----VKEE-----------MVDQGFVPDI 595
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/440 (21%), Positives = 189/440 (42%), Gaps = 18/440 (4%)
Query: 88 PQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI--FF 145
P+ A+ +LIE H L + T + + + Q+ + +DPD ++
Sbjct: 39 PRYDVAVIADLIEKQHWSKLGVHVTDINP----------NELFRQLISSELDPDLCLRYY 88
Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
+ ++ S ++E TF + S + + G+ G + + +S
Sbjct: 89 SWLVKNSDISVSLEL---TFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISM 145
Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
NV N ++LV A+ N + + G K ++ + A + +
Sbjct: 146 CDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSA 205
Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
E V EM +QPN T ++I+ CK GK+ +A MK YG PN+V +N LI
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265
Query: 326 KGFVEIMDRDGV---DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
G+ ++ + D VL M E V+P++ T++ +++ + + ++F +M
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
+KP+ +Y+ L G + +A + M+ +G PN++ + +I+G+C + + A
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
+++F + G P + + L+ Y + + + + M+ G+ P T+ L
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 503 RRATGLTKEAKRILSKIKNK 522
G + AK++ ++ +K
Sbjct: 446 LCRNGNIEAAKKLFDQLTSK 465
>sp|Q0WMY5|PP365_ARATH Pentatricopeptide repeat-containing protein At5g04810,
chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1
Length = 952
Score = 192 bits (487), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 138/508 (27%), Positives = 233/508 (45%), Gaps = 73/508 (14%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT------------ 118
T R T L+++ EA + + E G + SLVTY+ ++ +
Sbjct: 343 TSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWF 402
Query: 119 -----IQKRFN-SIH-----------------SIMSQVEENGMDPDSIFFNAVINAFSES 155
I K N SI+ +++ ++EE G+D ++ +++ ++
Sbjct: 403 DEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMV 462
Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
+ ++ + F ++KE G TPT TY LI Y GK +++++ +M EG VK NL+T
Sbjct: 463 ADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG-VKHNLKT 521
Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
Y++++ + K+ A+ V M GMKPDV+ YN I +A+ G D+A + + EM+
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581
Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
+P RT II GY K G ++ +L M+ G P + FN LI G VE +
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQME 641
Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD-------- 387
E+L M V+ + TY+ IM +++ G K E F + G+ D
Sbjct: 642 KAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 701
Query: 388 ---------------------------AHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
+ Y+IL G+ R + +A +L+ M + G
Sbjct: 702 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVK 761
Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
P++ +T+ IS G M+RA + ++M GV PN+KT+ TL+ G++ A P +A
Sbjct: 762 PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSC 821
Query: 481 LQIMKAFGVHPQKSTF--LLLAEARRAT 506
+ MKA G+ P K+ + LL + RA+
Sbjct: 822 YEEMKAMGIKPDKAVYHCLLTSLLSRAS 849
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 200/396 (50%), Gaps = 7/396 (1%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
TV + L+N + GK +A + + E G K +L TY+ ++ K + + ++
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
+ + GM PD I +N +I+AF GNM+ A+ T +M++ PTT T+ +I GY +
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
G S+++ D+M R G V P + T+N L+ ++ + +A ++ +M +G+ + T
Sbjct: 603 GDMRRSLEVFDMMRRCGCV-PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHT 661
Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
Y I YA G+ +A E +++ G+ + T ++ CK G+++ AL + M
Sbjct: 662 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721
Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
+ N ++N+LI G+ D +++ MK+ V PD+ TY++ ++A S AG M+
Sbjct: 722 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 781
Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
+ + ++M G+KP+ Y+ L KG+ R PEKA M G P+ ++ ++
Sbjct: 782 RATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Query: 431 SGWCSDGSMDRA------IEVFDKMCEHGVSPNLKT 460
+ S S+ A + + +M E G+ ++ T
Sbjct: 842 TSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGT 877
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 190/409 (46%), Gaps = 1/409 (0%)
Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
KPS + ++ + + ++ G+ P S + ++I+A++ +M+EA+
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
KMKE G+ + TY+ ++ G+ AG E + D R N Y ++ A
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT-LNASIYGKIIYAH 424
Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
C N+ A ++ +M G+ + Y+T+ Y + + V ++ G P
Sbjct: 425 CQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 484
Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
T G +I+ Y K GKI +AL +R MKE GV NL ++++I GFV++ D V
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
M + + PDVI Y+ I++A+ G MD+ + +M K +P + + GY + +
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
++ E+ M G P V F +I+G M++A+E+ D+M GVS N T+
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
+M GY+ +A E ++ G+ T+ L +A +G + A
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 200/447 (44%), Gaps = 36/447 (8%)
Query: 85 RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF 144
RG A+ F + G P+ YT+L+ A + + + S + +++E G++ +
Sbjct: 322 RGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVT 381
Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
++ ++ FS++G+ E A F + K T S Y +I + E + L+ M
Sbjct: 382 YSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREME 441
Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
EG P + Y+ ++ + + + V ++ G P VVTY + Y + G+
Sbjct: 442 EEGIDAP-IAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKI 500
Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
+A EV M+ GV+ N +T ++I+G+ K A M + G+ P+++++N +
Sbjct: 501 SKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 560
Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
I F + + D + + M++ R P T+ I++ ++ +G M + E+FD M + G
Sbjct: 561 ISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 620
Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
P H ++ L G V +++ EKA E+L M +G N +T I+ G+ S G +A E
Sbjct: 621 VPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 680
Query: 445 VFDKMCEHGVSPNLKTFETLMW-----------------------------------GYS 469
F ++ G+ ++ T+E L+ G++
Sbjct: 681 YFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 740
Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTF 496
W A +++Q MK GV P T+
Sbjct: 741 RRGDVWEAADLIQQMKKEGVKPDIHTY 767
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
P+ F ++ + G M RA E F++M G++P + + +L+ Y+ R A
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 481 LQIMKAFGVHPQKSTFLLL-------AEARRATGLTKEAKRI 515
++ MK G+ T+ ++ A A EAKRI
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRI 408
>sp|P0C7Q9|PPR56_ARATH Pentatricopeptide repeat-containing protein At1g22960,
mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2
SV=1
Length = 718
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/430 (28%), Positives = 210/430 (48%), Gaps = 8/430 (1%)
Query: 95 FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
F +I G PS+ +L L + N ++ + E+G+ P I FN ++++ +
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG-NVKPNL 213
+G++E + +MK + + TYN LI G+ GK EE+ + M R G V P
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP-- 308
Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
++N L+ +C + +AW V +M +G+ P TYN A G D A E++
Sbjct: 309 YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSS 368
Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
M P+ + ++ GY K GK EA ++ +HP++V +N LI G E +
Sbjct: 369 M----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 424
Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
+G + M + PDVITY+T++ + G + E++D+M + GIKPD +AY+
Sbjct: 425 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484
Query: 394 LAKGYVREQEPEKAEELLMTMIESGFH-PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
A G +R + +KA L M+ + H P++ I+ I G C G++ +AIE K+
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544
Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
G+ P+ T+ T++ GY E Q A + M ++P T+ +L G ++A
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604
Query: 513 KRILSKIKNK 522
+ +++K +
Sbjct: 605 FQYSTEMKKR 614
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 216/465 (46%), Gaps = 41/465 (8%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
+VR+ ++ L + +A A++ +IE G P+++T+ T+L + + I
Sbjct: 202 SVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIW 261
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
+++ ++ + +N +IN FS++G MEEA M+ SG T ++N LI+GY
Sbjct: 262 LEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQ 321
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
G +++ + D M G + P TYN+ + A C+ I +A ++ MAA PDVV+
Sbjct: 322 GLFDDAWGVTDEMLNAG-IYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVS 376
Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
YNT+ Y + G+ +A + ++ + P+ T +I G C+ G ++ A R M
Sbjct: 377 YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMT 436
Query: 311 EYGVHPNLVIFNLLIKGFV---------EIMD---RDGV--------------------D 338
+ P+++ + L+KGFV E+ D R G+ D
Sbjct: 437 TQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSD 496
Query: 339 EVLALMKEFRVN----PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
+ L +E PD+ Y+ ++ G + K E + + G+ PD Y+ +
Sbjct: 497 KAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTV 556
Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
+GY+ + + A L M+ +P+V+ + +I G G +++A + +M + GV
Sbjct: 557 IRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV 616
Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
PN+ T L++G +A A L M+ G+ P K ++ +L
Sbjct: 617 RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 661
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 164/411 (39%), Gaps = 71/411 (17%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V S LM+ I+ GK EA +F++L G PS+VTY TL+ L +
Sbjct: 374 VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKE 433
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
++ + PD I + ++ F ++GN+ A + + +M G+ P Y T G G
Sbjct: 434 EMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLG 493
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
+++ +L + M + P+L YNV + C N+ +A K+ G+ PD VTY
Sbjct: 494 DSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTY 553
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
T+ I GY + G+ K
Sbjct: 554 TTV-----------------------------------IRGYLENGQFK----------- 567
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
M R+ DE+L R+ P VITY ++ + AG +++
Sbjct: 568 --------------------MARNLYDEML----RKRLYPSVITYFVLIYGHAKAGRLEQ 603
Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
+ +M K G++P+ ++ L G + ++A L M E G PN +T +IS
Sbjct: 604 AFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS 663
Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
C + ++++ +M + + P+ T L + + E R E L+
Sbjct: 664 KNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL-FKHLEKDHESREVEFLE 713
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 152/341 (44%), Gaps = 18/341 (5%)
Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK--P 246
I KPE + + + + R+ +VK + + + ++ ++EA+ V + GM
Sbjct: 95 IRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEID 154
Query: 247 DVVTYNTIAT------------AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
D++ + Y + A++ +M G P+ R C I++
Sbjct: 155 DLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLR 214
Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
+ +A TM E+G+ P ++ FN ++ + D + VD++ MK + +
Sbjct: 215 DSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEV 274
Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
TY+ ++N +S G M++ + DM ++G ++++ L +GY ++ + A + M
Sbjct: 275 TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM 334
Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
+ +G +P + I C G +D A E+ M +P++ ++ TLM GY + +
Sbjct: 335 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKF 390
Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
A + ++A +HP T+ L + +G + A+R+
Sbjct: 391 VEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 130/524 (24%), Positives = 231/524 (44%), Gaps = 79/524 (15%)
Query: 68 SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
+C TV +++ G +EA+ F L G++P VTY LL +
Sbjct: 283 TCSTV------LSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEAL 336
Query: 128 SIMSQVEEN-----------------------------------GMDPDSIFFNAVINAF 152
S++ ++EEN G+ P++I + VI+A+
Sbjct: 337 SVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAY 396
Query: 153 SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
++G +EA+ F+ MKE+G P T TYN ++ G + E +K+L M G PN
Sbjct: 397 GKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG-CSPN 455
Query: 213 LRTYNVLVRAWCNEKNITEAWN-VMHKMAASGMKPDVVTYNTIATAY------------- 258
T+N ++ A C K + + N V +M + G +PD T+NT+ +AY
Sbjct: 456 RATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMY 514
Query: 259 ----------------------AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
A+ G+ E VI +M+ G +P + +++ Y K
Sbjct: 515 GEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKG 574
Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
G R +KE + P+ ++ L+ + G + L K+ PD++ +
Sbjct: 575 GNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIF 634
Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
+++++ ++ D+ + I + + + G+ PD Y+ L YVR E KAEE+L T+ +
Sbjct: 635 NSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEK 694
Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
S P++V + T+I G+C G M A+ + +M E G+ P + T+ T + GY+
Sbjct: 695 SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAE 754
Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
E++++ M P + TF ++ + G EA +SKIK
Sbjct: 755 IEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/522 (23%), Positives = 236/522 (45%), Gaps = 72/522 (13%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTY--------------------- 110
VR+ T ++++ GK ++A +F + E G P+LVTY
Sbjct: 210 VRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVL 269
Query: 111 ---------------TTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSES 155
+T+L+A + ++++ G +P ++ +NA++ F ++
Sbjct: 270 DEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKA 329
Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
G EA+ +M+E+ + TYN L+ Y AG +E+ ++++M+++G V PN T
Sbjct: 330 GVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG-VMPNAIT 388
Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
Y ++ A+ EA + + M +G P+ TYN + + + +++ +++ +M+
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
NG PN T +++ +G K R R MK G P+ FN LI +
Sbjct: 449 SNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEV 508
Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
++ M N V TY+ ++NA + G + + DM G KP +YS++
Sbjct: 509 DASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML 568
Query: 396 KGYVR-------EQEPEKAEE--------LLMTMI--------------------ESGFH 420
+ Y + E+ + +E LL T++ + G+
Sbjct: 569 QCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYK 628
Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
P++VIF +++S + + D+A + + + E G+SP+L T+ +LM Y + W+AEEI
Sbjct: 629 PDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI 688
Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
L+ ++ + P ++ + + GL +EA R+LS++ +
Sbjct: 689 LKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER 730
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 215/462 (46%), Gaps = 18/462 (3%)
Query: 43 KQLYSNSKPTDSQP-----QTHCSFCMNKESCRTVRSMTK------------LMNSLIER 85
K++ NS P DS + +KE+ + MTK ++++ +
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKA 399
Query: 86 GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
GK EA +F ++ E G P+ TY +L+ L + R N + ++ ++ NG P+ +
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW 459
Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
N ++ G + F +MK G P T+NTLI YG G ++ K+ M+R
Sbjct: 460 NTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR 519
Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
G + TYN L+ A + + NV+ M + G KP +Y+ + YA+ G
Sbjct: 520 AG-FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYL 578
Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
E + ++ + P+ ++ K + + R K++G P++VIFN ++
Sbjct: 579 GIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSML 638
Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
F D + +L ++E ++PD++TY+++M+ + G K +EI + K+ +K
Sbjct: 639 SIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLK 698
Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
PD +Y+ + KG+ R ++A +L M E G P + + T +SG+ + G +V
Sbjct: 699 PDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDV 758
Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
+ M ++ PN TF+ ++ GY A + A + + +K F
Sbjct: 759 IECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTF 800
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/477 (23%), Positives = 198/477 (41%), Gaps = 40/477 (8%)
Query: 55 QPQTHCSFCMNKESCRTVRS-MTKLMNSLIERGKPQEAQAIFNNLI----EGGHKPSLVT 109
QP T S + +R+ + L+ L + G + A +F L+ G K
Sbjct: 118 QPLTGLSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQV 177
Query: 110 YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK 169
+ L + +++ ++ ++ D + +++A+S +G E+A+D F +MK
Sbjct: 178 IEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMK 237
Query: 170 ESGLTPTTSTYNTLIKGYGIAGKP-EESVKLLDLM-------------------SREGNV 209
E G +PT TYN ++ +G G+ + + +LD M +REG +
Sbjct: 238 EMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLL 297
Query: 210 K---------------PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
+ P TYN L++ + TEA +V+ +M + D VTYN +
Sbjct: 298 REAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNEL 357
Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
AY + G + +A VI M GV PN T +I Y K GK EAL+ +MKE G
Sbjct: 358 VAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 417
Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
PN +N ++ + + + ++L MK +P+ T++T++ G
Sbjct: 418 VPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNR 477
Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
+F +M G +PD ++ L Y R A ++ M +GF+ V + +++
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALA 537
Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
G V M G P ++ ++ Y++ E I +K + P
Sbjct: 538 RKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFP 594
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 189 bits (479), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 215/437 (49%), Gaps = 1/437 (0%)
Query: 87 KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
K +A +F ++ E PS+V ++ LL A+ ++ ++ S+ +E G+ D F
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
+I+ F + A+ KM + G P+ T+ +L+ G+ + E++ L+D +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
G +PN+ YN ++ + C + + A +V+ M G++PDVVTYN++ T +G
Sbjct: 179 G-YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGV 237
Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
+ ++ +M G+ P+ T +I Y KEG++ EA + M + V+PN+V +N LI
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297
Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
G D +VL ++ P+ +TY+T++N + A +D +I M + G+
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDG 357
Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
D Y+ L +GY + + AE++L M+ G HP++ F ++ G C G + +A+
Sbjct: 358 DTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRL 417
Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
+ + + + T+ ++ G +A + A + + GV P T++ + R
Sbjct: 418 EDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRK 477
Query: 507 GLTKEAKRILSKIKNKE 523
L +EA + K++ ++
Sbjct: 478 RLWREAHELYRKMQKED 494
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 150/340 (44%), Gaps = 37/340 (10%)
Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
Y +R+ + +A + MA S P +V ++ + A A+ + + + +E
Sbjct: 47 YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106
Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR- 334
G+ + + +I +C+ ++ AL M + G P++V F L+ GF + +R
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHV-NRF 165
Query: 335 ----DGVDEVLAL-------------------------------MKEFRVNPDVITYSTI 359
VD+++ L MK+ + PDV+TY+++
Sbjct: 166 YEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSL 225
Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
+ +G I DM + GI PD +S L Y +E + +A++ MI+
Sbjct: 226 ITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSV 285
Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
+PN+V + ++I+G C G +D A +V + + G PN T+ TL+ GY +A++ +
Sbjct: 286 NPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMK 345
Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
IL +M GV T+ L + G A+++L ++
Sbjct: 346 ILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 189 bits (479), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 225/448 (50%), Gaps = 7/448 (1%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
V + L+N L G+ EA A+ N ++ G +VTY T++ + S +++
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
S++EE + PD + ++A+I+ + G+ +A F +M E G+ P TYN +I G+
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344
Query: 191 GKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
G+ ++ +LL D++ RE + P++ T+N L+ A E + EA + +M + PD V
Sbjct: 345 GRWSDAQRLLRDMIERE--INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402
Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
TYN++ + ++ D A+ + M P+ T II YC+ ++ E ++ R +
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
G+ N +N LI GF E+ + + ++ M V PD IT + ++ + +
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
++ E+F+ + + I D AY+I+ G + + ++A +L ++ G P+V + +
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
ISG+C ++ A +F KM ++G P+ T+ TL+ G +A + ++ E++ M++ G
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILS 517
T ++A+ L K +LS
Sbjct: 639 SGDAFTIKMVADLITDGRLDKSFSDMLS 666
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 222/447 (49%), Gaps = 12/447 (2%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
L ++E G EA A+F+ ++E G P ++T+ TL+ L ++ R ++++++ G
Sbjct: 198 LFGYMVETG-FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
+ D + + ++N + G+ + A++ KM+E+ + P Y+ +I G ++
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
L M +G + PN+ TYN ++ +C+ ++A ++ M + PDV+T+N + +A
Sbjct: 317 YLFSEMLEKG-IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
+ G+ +AE++ EM H + P+ T +I G+CK + +A + M + P+
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPD 431
Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
+V FN +I + VDE + L++E + + TY+T+++ + ++ ++
Sbjct: 432 VVTFNTIIDVYCR---AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488
Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
+F +M G+ PD +IL G+ ++ E+A EL + S + V + II G C
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548
Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
+D A ++F + HGV P+++T+ ++ G+ A + MK G P S
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608
Query: 495 TFLLLAEARRATGLTKEAKRILSKIKN 521
T+ L G ++ ++S++++
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRS 635
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 199/430 (46%), Gaps = 20/430 (4%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
T K++ + +P A +++ + ++ ++ L+ + + S
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES---------------GLTP 175
++ + G PD + FN +++ + EA+ F M E+ GLTP
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTP 224
Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
T+NTLI G + G+ E+ L++ M +G + ++ TY +V C + A N+
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
+ KM + +KPDVV Y+ I ++G A+ + EM G+ PN T +I G+C
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
G+ +A R R M E ++P+++ FN LI V+ +++ M + PD +T
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
Y++++ + D K +FD M PD ++ + Y R + ++ +LL +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
G N + T+I G+C +++ A ++F +M HGV P+ T L++G+ E +
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 476 RAEEILQIMK 485
A E+ ++++
Sbjct: 520 EALELFEVIQ 529
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 175/371 (47%), Gaps = 19/371 (5%)
Query: 140 PDSIF-FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
P +I+ FN +I F + + ++ TF K+ + G P T+NTL+ G + + E++
Sbjct: 138 PLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALA 197
Query: 199 LLDLMSREG--------------NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
L M G + P + T+N L+ C E + EA +++KM G+
Sbjct: 198 LFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257
Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
DVVTY TI + G+ A ++ +ME ++P+ II CK+G +A
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317
Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
M E G+ PN+ +N +I GF +L M E +NPDV+T++ +++A
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
G + + +++ D+M I PD Y+ + G+ + + A+ + M P+VV
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVV 433
Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
F TII +C +D +++ ++ G+ N T+ TL+ G+ E A+++ Q M
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 485 KAFGVHPQKST 495
+ GV P T
Sbjct: 494 ISHGVCPDTIT 504
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 179/381 (46%), Gaps = 20/381 (5%)
Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
++++A+D F M S T N +I + +P+ ++ L M + N+ ++
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR-RIPLNIYSF 144
Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT----------IATAYAQNG---E 263
N+L++ +C+ ++ + + K+ G +PDVVT+NT I+ A A G E
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 264 ADQAEEVIV--EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
E V + +M G+ P T +I+G C EG++ EA M G+H ++V +
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
++ G ++ D +L+ M+E + PDV+ YS I++ G + +F +M +
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
GI P+ Y+ + G+ A+ LL MIE +P+V+ F +IS +G +
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
A ++ D+M + P+ T+ ++++G+ + + A+ + +M + P TF + +
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIID 440
Query: 502 ARRATGLTKEAKRILSKIKNK 522
E ++L +I +
Sbjct: 441 VYCRAKRVDEGMQLLREISRR 461
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 137/314 (43%), Gaps = 21/314 (6%)
Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
K++ +A + M S V N + + + D A + +ME + N +
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL--- 343
I+I +C K+ +L + + G P++V FN L+ G D + E LAL
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCL---EDRISEALALFGY 201
Query: 344 ---------------MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
M E + P VIT++T++N G + + + + M G+ D
Sbjct: 202 MVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261
Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
Y + G + + + A LL M E+ P+VVI++ II C DG A +F +
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321
Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
M E G++PN+ T+ ++ G+ + A+ +L+ M ++P TF L A G
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 509 TKEAKRILSKIKNK 522
EA+++ ++ ++
Sbjct: 382 LFEAEKLCDEMLHR 395
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 188 bits (478), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 133/526 (25%), Positives = 241/526 (45%), Gaps = 82/526 (15%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIM 130
V S T L+++ G+ +EA +F + E G KP+L+TY +L + +N I S++
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
+++ +G+ PD+ +N +I +EA F +MK +G + TYN L+ YG +
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
+P+E++K+L+ M G P++ TYN L+ A+ + + EA + ++MA G KPDV T
Sbjct: 328 HRPKEAMKVLNEMVLNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386
Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
Y T+ + + + G+ + A + EM + G +PN T I Y GK E ++ +
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVD-EVLALMKEFR--------------------- 348
G+ P++V +N L+ F ++G+D EV + KE +
Sbjct: 447 VCGLSPDIVTWNTLLAVF----GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502
Query: 349 -----------------VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
V PD+ TY+T++ A + G ++ +++ +M KP+ Y
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
Query: 392 SILAKGYVREQE------------------------------------PEKAEELLMTMI 415
L Y +E PE AE +
Sbjct: 563 CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE-AERAFSELK 621
Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
E GF P++ +++S + + +A V D M E G +P++ T+ +LM+ +S +
Sbjct: 622 ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFG 681
Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
++EEIL+ + A G+ P ++ + A ++A RI S+++N
Sbjct: 682 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRN 727
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 204/466 (43%), Gaps = 36/466 (7%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
++ + L+++ G EA + N + E G KP + TYTTLL+ + S SI
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
++ G P+ FNA I + G E M F ++ GL+P T+NTL+ +G
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
G E + M R G V P T+N L+ A+ + +A V +M +G+ PD+ T
Sbjct: 468 GMDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526
Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI----------- 299
YNT+ A A+ G +Q+E+V+ EME +PN T ++ Y +I
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586
Query: 300 ------------------------KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
EA R +KE G P++ N ++ +
Sbjct: 587 SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA 646
Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
+ VL MKE P + TY+++M S + K +EI ++ GIKPD +Y+ +
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706
Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
Y R A + M SG P+V+ + T I + +D + AI V M +HG
Sbjct: 707 YAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCR 766
Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
PN T+ +++ GY + + A+ ++ ++ H K L L E
Sbjct: 767 PNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKGEDLRLLE 812
Score = 186 bits (471), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 222/449 (49%), Gaps = 8/449 (1%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
+++ L + G+ A +FN L E G + +YT+L++A R+ ++ ++EE+G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
P I +N ++N F + G + + KMK G+ P TYNTLI +E+
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
++ + M G + TYN L+ + EA V+++M +G P +VTYN++ +
Sbjct: 299 AQVFEEMKAAGFSYDKV-TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
AYA++G D+A E+ +M G +P+ T ++SG+ + GK++ A+ M+ G P
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV---NPDVITYSTIMNAWSTAGFMDKCK 373
N+ FN IK + +R E++ + E V +PD++T++T++ + G +
Sbjct: 418 NICTFNAFIKMY---GNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
+F +M +AG P+ ++ L Y R E+A + M+++G P++ + T+++
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 534
Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
G +++ +V +M + PN T+ +L+ Y+ ++ + + + + + P+
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA 594
Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNK 522
L L EA+R S++K +
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKER 623
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 163/370 (44%), Gaps = 3/370 (0%)
Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
+SG ++ + ++ + T+S +KG G K + +++ D ++ + + L
Sbjct: 112 DSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSML 171
Query: 214 --RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
+++ E ++ A N+ + + G DV +Y ++ +A+A +G +A V
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231
Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKI-KEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
+ME +G +P T +I++ + K G + MK G+ P+ +N LI
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291
Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
+V MK + D +TY+ +++ + + + ++ ++M G P
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351
Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
Y+ L Y R+ ++A EL M E G P+V +TT++SG+ G ++ A+ +F++M
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
G PN+ TF + Y + +I + G+ P T+ L G+
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 511 EAKRILSKIK 520
E + ++K
Sbjct: 472 EVSGVFKEMK 481
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 189/381 (49%), Gaps = 3/381 (0%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
+M+ + +P A +++ G +P LVT+T+LL R ++ Q+ G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
P+ + + +I ++ ++ A++ F +M +G P TYN L+ G G+ ++
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 198 KLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
LL D+M R ++PN+ T+ L+ A+ + EA + + M + PDV TY ++
Sbjct: 244 WLLRDMMKRR--IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
G D+A ++ ME NG PN +I G+CK ++++ ++ M + GV
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
N + + +LI+G+ + D EV M R PD+ TY+ +++ G ++K IF
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
+ M K + + Y+I+ +G + + E A +L ++ G PNV+ +TT+ISG+C
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481
Query: 437 GSMDRAIEVFDKMCEHGVSPN 457
G + A +F KM E G PN
Sbjct: 482 GLIHEADSLFKKMKEDGFLPN 502
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 223/472 (47%), Gaps = 4/472 (0%)
Query: 49 SKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLV 108
S P + + C FC R S K++ + + + +A +F ++ PS++
Sbjct: 28 SNPRTAASLSLCGFCF---WIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSII 84
Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
+T LL+ + R++ + S+ Q++ G+ P N V++ S A KM
Sbjct: 85 DFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKM 144
Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
+ G P T+ +L+ GY + E+++ L D + G KPN+ TY L+R C ++
Sbjct: 145 MKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG-FKPNVVTYTTLIRCLCKNRH 203
Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
+ A + ++M +G +P+VVTYN + T + G A ++ +M ++PN T
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
+I + K GK+ EA M + V+P++ + LI G D ++ LM+
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
P+ + Y+T+++ + + ++ +IF +M + G+ + Y++L +GY P+ A+
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
E+ M P++ + ++ G C +G +++A+ +F+ M + + N+ T+ ++ G
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGM 443
Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
+ + A ++ + + G+ P T+ + GL EA + K+K
Sbjct: 444 CKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 196/429 (45%), Gaps = 8/429 (1%)
Query: 160 EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
+A+D F +M S P+ + L+ + + + L + M G + P L T N++
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILG-IPPLLCTCNIV 124
Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
+ C A + KM G +PD+VT+ ++ Y + A + ++ G
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
+PN T +I CK + A+ M G PN+V +N L+ G EI
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
+L M + R+ P+VIT++ +++A+ G + + KE+++ M + + PD Y L G
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304
Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
++A ++ M +G +PN VI+TT+I G+C ++ +++F +M + GV N
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364
Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
T+ L+ GY +P A+E+ M + P T+ +L + G ++A I +
Sbjct: 365 TYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Query: 520 KNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLL---QIPNVVSSDQKGSAAALKKG 576
+ +E + I ++ + +L E + +L PNV++ S ++G
Sbjct: 425 RKREMDINI-VTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC-RRG 482
Query: 577 RMLLRDADS 585
L+ +ADS
Sbjct: 483 --LIHEADS 489
Score = 40.4 bits (93), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 41/70 (58%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
+ + T ++ + + GK ++A +F +L G KP+++TYTT+++ + + S+
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFK 492
Query: 132 QVEENGMDPD 141
+++E+G P+
Sbjct: 493 KMKEDGFLPN 502
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 197/421 (46%)
Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
G KP + T+ L+ AL + ++ + G+ PD F V+ + E G+++ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
+ +M E G + + + N ++ G+ G+ E+++ + MS + P+ T+N LV
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
C ++ A +M M G PDV TYN++ + + GE +A EV+ +M P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
N T +IS CKE +++EA AR + G+ P++ FN LI+G + E+
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
M+ PD TY+ ++++ + G +D+ + M +G Y+ L G+ +
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
+ +AEE+ M G N V + T+I G C ++ A ++ D+M G P+ T+
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
+L+ + +A +I+Q M + G P T+ L G + A ++L I+
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 522 K 522
K
Sbjct: 604 K 604
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/496 (24%), Positives = 225/496 (45%), Gaps = 39/496 (7%)
Query: 73 RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF-NSIHSIMS 131
++ T +M IE G A I ++E G S V+ ++ + R ++++ I
Sbjct: 225 KTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
++G PD FN ++N ++G+++ A++ M + G P TYN++I G G
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
+ +E+V++LD M + PN TYN L+ C E + EA + + + G+ PDV T+
Sbjct: 345 EVKEAVEVLDQMITR-DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
N++ A E+ EM G +P+ T ++I C +GK+ EAL + M+
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
G +++ +N LI GF + +E+ M+ V+ + +TY+T+++ + ++
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
++ D M G KPD + Y+ L + R + +KA +++ M +G P++V + T+IS
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Query: 432 GWCSDGSMD-----------------------------------RAIEVFDKMCEHG-VS 455
G C G ++ AI +F +M E
Sbjct: 584 GLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
Query: 456 PNLKTFETLMWGYSEARQPWR-AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
P+ ++ + G P R A + L + G P+ S+ +LAE + + +
Sbjct: 644 PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVK 703
Query: 515 ILSKIKNKERTNEMEA 530
+++ + K R +E E
Sbjct: 704 LVNMVMQKARFSEEEV 719
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 192/425 (45%), Gaps = 36/425 (8%)
Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
++E G+ PD+ F+N ++N + +++ + KM G+ P ST+N LIK A +
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204
Query: 193 PEESVKLLDLMS-------------------REGNVKPNLR---------------TYNV 218
++ +L+ M EG++ LR + NV
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264
Query: 219 LVRAWCNEKNITEAWNVMHKMA-ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
+V +C E + +A N + +M+ G PD T+NT+ + G A E++ M
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
G P+ T +ISG CK G++KEA+ M PN V +N LI + +
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
E+ ++ + PDV T+++++ E+F++M G +PD Y++L
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
+ + ++A +L M SG +V+ + T+I G+C A E+FD+M HGVS N
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF-LLLAEARRATGLTKEAKRIL 516
T+ TL+ G ++R+ A +++ M G P K T+ LL R + K A +
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Query: 517 SKIKN 521
+ N
Sbjct: 565 AMTSN 569
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 188/386 (48%), Gaps = 9/386 (2%)
Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
P+ + ++ SG+ ++ MK S TST+ LI+ Y +E + +
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
+D M E +KP+ YN ++ + ++ KM+ G+KPDV T+N + A
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
+ + A ++ +M G+ P+ +T ++ GY +EG + ALR M E+G + V
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 320 IFNLLIKGFVEIMDRDG-VDEVLALMKEFR----VNPDVITYSTIMNAWSTAGFMDKCKE 374
N+++ GF ++G V++ L ++E PD T++T++N AG + E
Sbjct: 261 SVNVIVHGFC----KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316
Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
I D M + G PD + Y+ + G + E ++A E+L MI PN V + T+IS C
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 376
Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
+ ++ A E+ + G+ P++ TF +L+ G R A E+ + M++ G P +
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436
Query: 495 TFLLLAEARRATGLTKEAKRILSKIK 520
T+ +L ++ + G EA +L +++
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQME 462
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 177/365 (48%), Gaps = 38/365 (10%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR--------- 122
V + +++ L + G+ +EA + + +I P+ VTY TL++ L + +
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
Query: 123 -------------FNSI---------HSIMSQVEE----NGMDPDSIFFNAVINAFSESG 156
FNS+ H + ++ E G +PD +N +I++ G
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
++EA++ +M+ SG + TYNTLI G+ A K E+ ++ D M G V N TY
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG-VSRNSVTY 508
Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
N L+ C + + +A +M +M G KPD TYN++ T + + G+ +A +++ M
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG-FVEIMDRD 335
NG +P+ T G +ISG CK G+++ A + R+++ G++ +N +I+G F + +
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE 628
Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF-MDKCKEIFDDMGKAGIKPDAHAYSIL 394
++ ++++ PD ++Y + G + + + ++ + G P+ + +L
Sbjct: 629 AINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688
Query: 395 AKGYV 399
A+G +
Sbjct: 689 AEGLL 693
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 5/215 (2%)
Query: 70 RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
R+V + L++ + K +EA+ IF+ + G + VTY TL+ L +R +
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
M Q+ G PD +N+++ F G++++A D M +G P TY TLI G
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 190 AGKPEESVKLLDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-MKPD 247
AG+ E + KLL + +G N+ P+ YN +++ ++ TEA N+ +M PD
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPD 645
Query: 248 VVTYNTIATAYAQ-NGEADQAEEVIVEMEHNGVQP 281
V+Y + G +A + +VE+ G P
Sbjct: 646 AVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 149/353 (42%), Gaps = 23/353 (6%)
Query: 173 LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA 232
LTP +ST + A VKLLD + + + LR +N+ +
Sbjct: 29 LTPPSSTIS--FASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKK---------- 76
Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
P+ Y I ++G D ++++ +M+ + + T I+I
Sbjct: 77 ---------PNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIES 127
Query: 293 YCKEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
Y + E L M E+G+ P+ +N ++ V+ V+ A M + + P
Sbjct: 128 YAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKP 187
Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
DV T++ ++ A A + + +DM G+ PD ++ + +GY+ E + + A +
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC-EHGVSPNLKTFETLMWGYSE 470
M+E G + V I+ G+C +G ++ A+ +M + G P+ TF TL+ G +
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
A A EI+ +M G P T+ + G KEA +L ++ ++
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 120/476 (25%), Positives = 225/476 (47%), Gaps = 44/476 (9%)
Query: 86 GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
G+ EA ++E G +P+L+TY+ L+ LT KR + ++ ++ + G P+ I +
Sbjct: 322 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 381
Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMS 204
N +I++F E+G++ +A++ M GL+ T+STYNTLIKGY G+ + + +LL +++S
Sbjct: 382 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 441
Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
NV N ++ ++ C+ A + +M M P T+ + ++G+
Sbjct: 442 IGFNV--NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 499
Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
+A E+ + + G + RT ++ G C+ GK+ EA R + + G + V +N L
Sbjct: 500 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 559
Query: 325 IKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
I G + +DE + E + PD TYS ++ +++ + +DD +
Sbjct: 560 ISG---CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 616
Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
G+ PD + YS++ G + + E+ +E M+ PN V++ +I +C G +
Sbjct: 617 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 676
Query: 442 AIEVFDKMCEHGVSPNLKTFETLMW----------------------------------- 466
A+E+ + M G+SPN T+ +L+
Sbjct: 677 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 736
Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
GY + Q + E +L+ M + VHP K T+ ++ G EA R+L++++ K
Sbjct: 737 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 792
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 191/398 (47%), Gaps = 1/398 (0%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
T + L+ + G+ A+ + ++ G + ++T+++ L F+S +
Sbjct: 412 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 471
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
++ M P +I+ + G +A++ +++ G T T N L+ G A
Sbjct: 472 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 531
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
GK +E+ ++ + G V + +YN L+ C +K + EA+ + +M G+KPD T
Sbjct: 532 GKLDEAFRIQKEILGRGCVMDRV-SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 590
Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
Y+ + + ++A + + + NG+ P+ T ++I G CK + +E F M
Sbjct: 591 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 650
Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
V PN V++N LI+ + E+ MK ++P+ TY++++ S ++
Sbjct: 651 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 710
Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
+ K +F++M G++P+ Y+ L GY + + K E LL M HPN + +T +I
Sbjct: 711 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 770
Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
G+ DG++ A + ++M E G+ P+ T++ ++GY
Sbjct: 771 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 808
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/476 (24%), Positives = 208/476 (43%), Gaps = 3/476 (0%)
Query: 48 NSKPTDSQPQTHCSFCMNKESCRTVRSM-TKLMNSLIERGKPQEAQAIFNNLIEGGHKPS 106
+S+ + S C ++E R + + ++ + +R A +F L G PS
Sbjct: 179 DSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPS 238
Query: 107 LVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW 166
T LL +L F V + G+ PD F INAF + G +EEA+ F
Sbjct: 239 KTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFS 297
Query: 167 KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
KM+E+G+ P T+NT+I G G+ G+ +E+ + M G ++P L TY++LV+
Sbjct: 298 KMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG-MEPTLITYSILVKGLTRA 356
Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
K I +A+ V+ +M G P+V+ YN + ++ + G ++A E+ M G+ T
Sbjct: 357 KRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY 416
Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
+I GYCK G+ A R + M G + N F +I + D + M
Sbjct: 417 NTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL 476
Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
++P +T+++ G K E++ G D + L G + ++
Sbjct: 477 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 536
Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
A + ++ G + V + T+ISG C +D A D+M + G+ P+ T+ L+
Sbjct: 537 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 596
Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
G + A + K G+ P T+ ++ + T+E + ++ +K
Sbjct: 597 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 652
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 190/419 (45%), Gaps = 1/419 (0%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
L++S IE G +A I + ++ G + TY TL+ + ++ ++ ++ G
Sbjct: 384 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 443
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
+ + F +VI + A+ +M ++P TLI G GK +++
Sbjct: 444 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 503
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
+L +G V + RT N L+ C + EA+ + ++ G D V+YNT+ +
Sbjct: 504 ELWFQFLNKGFV-VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 562
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
+ D+A + EM G++P+ T I+I G K++EA++F K G+ P+
Sbjct: 563 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 622
Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
+ ++++I G + + E M V P+ + Y+ ++ A+ +G + E+ +
Sbjct: 623 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 682
Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
DM GI P++ Y+ L KG E+A+ L M G PNV +T +I G+ G
Sbjct: 683 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 742
Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
M + + +M V PN T+ ++ GY+ A +L M+ G+ P T+
Sbjct: 743 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 801
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 157/337 (46%), Gaps = 7/337 (2%)
Query: 111 TTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE 170
TTL++ L + + + Q G D+ NA+++ E+G ++EA ++
Sbjct: 487 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 546
Query: 171 SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT 230
G +YNTLI G K +E+ LD M + G +KP+ TY++L+ N +
Sbjct: 547 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG-LKPDNYTYSILICGLFNMNKVE 605
Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
EA +GM PDV TY+ + + ++ +E EM VQPN +I
Sbjct: 606 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 665
Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR-- 348
YC+ G++ AL MK G+ PN + LIKG + I+ R V+E L +E R
Sbjct: 666 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG-MSIISR--VEEAKLLFEEMRME 722
Query: 349 -VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
+ P+V Y+ +++ + G M K + + +M + P+ Y+++ GY R+ +A
Sbjct: 723 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 782
Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
LL M E G P+ + + I G+ G + A +
Sbjct: 783 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 1/181 (0%)
Query: 87 KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
+ +E Q F+ ++ +P+ V Y L+ A R + + ++ G+ P+S +
Sbjct: 638 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 697
Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
++I S +EEA F +M+ GL P Y LI GYG G+ + LL M +
Sbjct: 698 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 757
Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
NV PN TY V++ + + N+TEA ++++M G+ PD +TY Y + G +
Sbjct: 758 -NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE 816
Query: 267 A 267
A
Sbjct: 817 A 817
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
T S+ K M S+I R +EA+ +F + G +P++ YT L+ + + ++
Sbjct: 695 TYTSLIKGM-SIISR--VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 751
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
++ + P+ I + +I ++ GN+ EA +M+E G+ P + TY I GY
Sbjct: 752 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 811
Query: 191 GKPEESVK 198
G E+ K
Sbjct: 812 GGVLEAFK 819
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 200/398 (50%), Gaps = 4/398 (1%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V + ++N L + GK ++A+ + G KP++VTY TL+ +++ R I+S
Sbjct: 225 VYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIIS 284
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
+++ G PD +N +++ G E + +MKE GL P + +YN LI+G G
Sbjct: 285 EMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNG 341
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
E + D M ++G V P TYN L+ E I A ++ ++ G+ D VTY
Sbjct: 342 DLEMAFAYRDEMVKQGMV-PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTY 400
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
N + Y Q+G+A +A + EM +G+QP T +I C++ K +EA +
Sbjct: 401 NILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVG 460
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
G+ P+LV+ N L+ G I + D +L M +NPD +TY+ +M G ++
Sbjct: 461 KGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEE 520
Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
+E+ +M + GIKPD +Y+ L GY ++ + + A + M+ GF+P ++ + ++
Sbjct: 521 ARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLK 580
Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
G + + A E+ +M G+ PN +F +++ S
Sbjct: 581 GLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMS 618
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 201/436 (46%), Gaps = 10/436 (2%)
Query: 67 ESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
E+C + ++ +N + + A + ++ K ++ T+ ++ L + +
Sbjct: 191 ETCNHILTLLSRLNRI------ENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 244
Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
+ +E G+ P + +N ++ FS G +E A +MK G P TYN ++
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW 304
Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
G+ E ++ + +E + P+ +YN+L+R N ++ A+ +M GM P
Sbjct: 305 MCNEGRASEVLREM----KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVP 360
Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
TYNT+ + + AE +I E+ G+ + T I+I+GYC+ G K+A
Sbjct: 361 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALH 420
Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
M G+ P + LI DE+ + + PD++ +T+M+
Sbjct: 421 DEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAI 480
Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
G MD+ + +M I PD Y+ L +G E + E+A EL+ M G P+ + +
Sbjct: 481 GNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISY 540
Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
T+ISG+ G A V D+M G +P L T+ L+ G S+ ++ AEE+L+ MK+
Sbjct: 541 NTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKS 600
Query: 487 FGVHPQKSTFLLLAEA 502
G+ P S+F + EA
Sbjct: 601 EGIVPNDSSFCSVIEA 616
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 205/441 (46%), Gaps = 44/441 (9%)
Query: 111 TTLLAALTIQKRFNSIHSIMSQV---EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
T L + R NSI ++ ++ + +I F+ ++ + ++EA++ F+
Sbjct: 121 VTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYL 180
Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEES-VKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
MKE G P T T N ++ + E + V D+ E +K N+ T+N+++ C E
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRME--IKSNVYTFNIMINVLCKE 238
Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
+ +A + M G+KP +VTYNT+ ++ G + A +I EM+ G QP+ +T
Sbjct: 239 GKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTY 298
Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG------------FVEIMDR 334
I+S C EG+ E LR MKE G+ P+ V +N+LI+G + + M +
Sbjct: 299 NPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVK 355
Query: 335 DG--------------------VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDK 371
G ++ L++E R + D +TY+ ++N + G K
Sbjct: 356 QGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKK 415
Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
+ D+M GI+P Y+ L R+ + +A+EL ++ G P++V+ T++
Sbjct: 416 AFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMD 475
Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
G C+ G+MDRA + +M ++P+ T+ LM G + A E++ MK G+ P
Sbjct: 476 GHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKP 535
Query: 492 QKSTFLLLAEARRATGLTKEA 512
++ L G TK A
Sbjct: 536 DHISYNTLISGYSKKGDTKHA 556
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 211/452 (46%), Gaps = 19/452 (4%)
Query: 90 EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
EA F + E G P T +L L+ R + + + + + FN +I
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232
Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
N + G +++A M+ G+ PT TYNTL++G+ + G+ E + ++ M +G
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG-F 291
Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
+P+++TYN ++ CNE +E V+ +M G+ PD V+YN + + NG+ + A
Sbjct: 292 QPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA 348
Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
EM G+ P T +I G E KI+ A R ++E G+ + V +N+LI G+
Sbjct: 349 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYC 408
Query: 330 EIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
+ D + AL E + P TY++++ + E+F+ + G+KP
Sbjct: 409 QHGD---AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKP 465
Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
D + L G+ ++A LL M +P+ V + ++ G C +G + A E+
Sbjct: 466 DLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELM 525
Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
+M G+ P+ ++ TL+ GYS+ A + M + G +P T+ L +
Sbjct: 526 GEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLK----- 580
Query: 507 GLTKEAKRILSKIKNKERTNEMEAEEDIPVES 538
GL+K + L+ +E EM++E +P +S
Sbjct: 581 GLSKNQEGELA----EELLREMKSEGIVPNDS 608
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 146/336 (43%), Gaps = 32/336 (9%)
Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
+++LVR C + + EA + M G P T N I T ++ + A +M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF------- 328
++ N T I+I+ CKEGK+K+A F M+ +G+ P +V +N L++GF
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 329 -----VEIMDRDG--------------------VDEVLALMKEFRVNPDVITYSTIMNAW 363
+ M G EVL MKE + PD ++Y+ ++
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGC 337
Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
S G ++ D+M K G+ P + Y+ L G E + E AE L+ + E G +
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
V + +I+G+C G +A + D+M G+ P T+ +L++ + A+E+ +
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 484 MKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
+ G+ P L + A G A +L ++
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 185 bits (470), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 226/468 (48%), Gaps = 16/468 (3%)
Query: 24 VKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLI 83
+ + WG+ K+++ ++++ K S+P ++ +K+++ +
Sbjct: 33 ISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLP------------SIVDFSKVLSKIA 80
Query: 84 ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI 143
+ ++F+++ G L +Y ++ L RF S++ ++ + G +PD +
Sbjct: 81 KSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVV 140
Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
+++IN F + + +A+D KM+E G P YNT+I G G ++V+L D M
Sbjct: 141 TVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRM 200
Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
R+G V+ + TYN LV C ++A +M M + P+V+T+ + + + G+
Sbjct: 201 ERDG-VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259
Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
+A ++ EM V P+ T +I+G C G++ EA + M G P++V +N
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 319
Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
LI GF + D ++ M + + D ITY+TI+ + AG D +EIF M
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS-- 377
Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
+P+ YSIL G EKA L M +S ++ + +I G C G+++ A
Sbjct: 378 -RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 436
Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
++F + G+ P++ ++ T++ G+ RQ +++ + + M+ G+ P
Sbjct: 437 DLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 175/393 (44%), Gaps = 74/393 (18%)
Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
S F+ + S N+EE +D F KM +S P+ ++ ++ + + + L
Sbjct: 34 SRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFH 93
Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
M G + +L +YN+++ C A +V+ KM G +PDVVT +++
Sbjct: 94 HMEVCG-IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL------- 145
Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
I+G+C+ ++ +A+ M+E G P++VI+
Sbjct: 146 ----------------------------INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIY 177
Query: 322 NLLIKGFVEI------------MDRDGV--------------------DEVLALMKEF-- 347
N +I G +I M+RDGV + LM++
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237
Query: 348 -RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
+ P+VIT++ +++ + G + +++++M + + PD Y+ L G ++
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297
Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
A+++L M+ G P+VV + T+I+G+C +D ++F +M + G+ + T+ T++
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357
Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
GY +A +P A+EI M + P T+ +L
Sbjct: 358 GYFQAGRPDAAQEIFSRMDS---RPNIRTYSIL 387
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%)
Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
P++V F+ ++ + + D V + M+ + D+ +Y+ ++N +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
M K G +PD S L G+ + A +L+ M E GF P+VVI+ TII G C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
G ++ A+E+FD+M GV + T+ +L+ G + + A +++ M + P T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 496 FLLLAEARRATGLTKEAKRILSKIKNK 522
F + + G EA ++ ++ +
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRR 273
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 84/178 (47%)
Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
++ M + R P ++ +S +++ + + D +F M GI D ++Y+I+
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
R A ++ M++ G+ P+VV +++I+G+C + AI++ KM E G P++
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
+ T++ G + A E+ M+ GV T+ L +G +A R++
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 219/447 (48%), Gaps = 4/447 (0%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V + T + L GK EA I + + G P +VTYT L+ AL ++ + +
Sbjct: 258 VYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFE 317
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIA 190
+++ PD + + +++ FS++ +++ ++ FW +M++ G P T+ L+ A
Sbjct: 318 KMKTGRHKPDRVTYITLLDRFSDNRDLD-SVKQFWSEMEKDGHVPDVVTFTILVDALCKA 376
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
G E+ LD+M +G + PNL TYN L+ + +A + M + G+KP T
Sbjct: 377 GNFGEAFDTLDVMRDQG-ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYT 435
Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
Y Y ++G++ A E +M+ G+ PN C + K G+ +EA + +K
Sbjct: 436 YIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK 495
Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
+ G+ P+ V +N+++K + ++ + D ++L+ M E PDVI ++++N A +D
Sbjct: 496 DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVD 555
Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
+ ++F M + +KP Y+ L G + + ++A EL M++ G PN + F T+
Sbjct: 556 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615
Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
C + + A+++ KM + G P++ T+ T+++G + Q A MK V+
Sbjct: 616 DCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VY 674
Query: 491 PQKSTFLLLAEARRATGLTKEAKRILS 517
P T L L ++A +I++
Sbjct: 675 PDFVTLCTLLPGVVKASLIEDAYKIIT 701
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 167/326 (51%), Gaps = 9/326 (2%)
Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
G +P L TY L+ L + QV+ G PD +N +++A+ +SG ++E
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYNVLV 220
+ + +M T T+N +I G AG ++++ L DLMS + + P TY L+
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS-DRDFSPTACTYGPLI 898
Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
+ EA + M G +P+ YN + + + GEAD A + M GV+
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958
Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
P+ +T +++ C G++ E L + + +KE G++P++V +NL+I G + ++E
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK---SHRLEEA 1015
Query: 341 LALMKEFR----VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
L L E + + PD+ TY++++ AG +++ +I++++ +AG++P+ ++ L +
Sbjct: 1016 LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075
Query: 397 GYVREQEPEKAEELLMTMIESGFHPN 422
GY +PE A + TM+ GF PN
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 162 bits (409), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 126/515 (24%), Positives = 218/515 (42%), Gaps = 71/515 (13%)
Query: 52 TDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYT 111
TDS S N T + ++ +L GK +E +F+ + + K TY
Sbjct: 98 TDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYL 157
Query: 112 TLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES 171
T+ +L+++ + ++ E G ++ +N +I+ +S EAM+ + +M
Sbjct: 158 TIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILE 217
Query: 172 GLTPTTSTYNTLIKGYGI-----------------------------------AGKPEES 196
G P+ TY++L+ G G AGK E+
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
++L M EG P++ TY VL+ A C + + A V KM KPD VTY T+
Sbjct: 278 YEILKRMDDEG-CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD 336
Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
++ N + D ++ EME +G P+ T I++ CK G EA M++ G+ P
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW------------- 363
NL +N LI G + + D E+ M+ V P TY ++ +
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 364 ----------------------STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
+ AG + K+IF + G+ PD+ Y+++ K Y +
Sbjct: 457 EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 516
Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
E ++A +LL M+E+G P+V++ ++I+ +D A ++F +M E + P + T+
Sbjct: 517 GEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTY 576
Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
TL+ G + + A E+ + M G P TF
Sbjct: 577 NTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 203/429 (47%), Gaps = 8/429 (1%)
Query: 74 SMTKLMNSLIERGKPQEAQAIFNN-LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
++ L+ +++ ++A I N L +P+ + + L+ ++ + ++ S +
Sbjct: 679 TLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSER 738
Query: 133 VEENGM--DPDSIFFNAVINAFSESGNMEEAMDTFWKM-KESGLTPTTSTYNTLIKGYGI 189
+ NG+ D DSI +I + N+ A F K K+ G+ P TYN LI G
Sbjct: 739 LVANGICRDGDSILV-PIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE 797
Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
A E + + + G + P++ TYN L+ A+ I E + + +M+ + + +
Sbjct: 798 ADMIEIAQDVFLQVKSTGCI-PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTI 856
Query: 250 TYNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
T+N + + + G D A ++ + M P T G +I G K G++ EA +
Sbjct: 857 THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEG 916
Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
M +YG PN I+N+LI GF + + D + M + V PD+ TYS +++ G
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES-GFHPNVVIFT 427
+D+ F ++ ++G+ PD Y+++ G + E+A L M S G P++ +
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036
Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
++I G ++ A ++++++ G+ PN+ TF L+ GYS + +P A + Q M
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG 1096
Query: 488 GVHPQKSTF 496
G P T+
Sbjct: 1097 GFSPNTGTY 1105
Score = 152 bits (384), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 109/489 (22%), Positives = 217/489 (44%), Gaps = 40/489 (8%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
TV + L+ L + GK QEA +F +++ G P+ +T+ TL L ++
Sbjct: 572 TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG---- 186
++ + G PD +N +I ++G ++EAM F +MK+ + P T TL+ G
Sbjct: 632 FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKA 690
Query: 187 --------------YGIAGKP------------------EESVKLLDLMSREGNVKPNLR 214
Y A +P + +V + + G +
Sbjct: 691 SLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDS 750
Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
++R C N++ A + K G++P + TYN + + + A++V ++
Sbjct: 751 ILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ 810
Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
++ G P+ T ++ Y K GKI E + M + N + N++I G V+ +
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 334 -RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
D +D LM + +P TY +++ S +G + + K++F+ M G +P+ Y+
Sbjct: 871 VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 930
Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
IL G+ + E + A L M++ G P++ ++ ++ C G +D + F ++ E
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990
Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMK-AFGVHPQKSTFLLLAEARRATGLTKE 511
G++P++ + ++ G ++ + A + MK + G+ P T+ L G+ +E
Sbjct: 991 GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050
Query: 512 AKRILSKIK 520
A +I ++I+
Sbjct: 1051 AGKIYNEIQ 1059
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 174/380 (45%), Gaps = 9/380 (2%)
Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
N ++ A G +EE F M++ + T+TY T+ K + G +++ L M R
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM-R 180
Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
E N +YN L+ + TEA V +M G +P + TY+++ + + D
Sbjct: 181 EFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDID 240
Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
++ EME G++PN T I I + GKI EA + M + G P++V + +LI
Sbjct: 241 SVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLI 300
Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
D EV MK R PD +TY T+++ +S +D K+ + +M K G
Sbjct: 301 DALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV 360
Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
PD ++IL + +A + L M + G PN+ + T+I G +D A+E+
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ----KSTFLLLAE 501
F M GV P T+ + Y ++ A E + MK G+ P ++ LA+
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 480
Query: 502 ARRATGLTKEAKRILSKIKN 521
A R +EAK+I +K+
Sbjct: 481 AGR----DREAKQIFYGLKD 496
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 189/411 (45%), Gaps = 1/411 (0%)
Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
T +L AL + + + + +++ + D+ + + + S G +++A KM
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
+E G +YN LI + E++++ M EG +P+L+TY+ L+ ++
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG-FRPSLQTYSSLMVGLGKRRD 238
Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
I ++ +M G+KP+V T+ + G+ ++A E++ M+ G P+ T +
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 298
Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
+I C K+ A MK P+ V + L+ F + D D V + + M++
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
PDV+T++ +++A AG + + D M GI P+ H Y+ L G +R + A
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
EL M G P + I + G A+E F+KM G++PN+ ++
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 478
Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
++A + A++I +K G+ P T+ ++ + G EA ++LS++
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 162/333 (48%), Gaps = 9/333 (2%)
Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
G+ P +N +I E+ +E A D F ++K +G P +TYN L+ YG +GK +E
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK-MAASGMKPDVVTYNTIA 255
+L MS + N T+N+++ N+ +A ++ + M+ P TY +
Sbjct: 840 FELYKEMSTH-ECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
+++G +A+++ M G +PN I+I+G+ K G+ A + M + GV
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958
Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKC 372
P+L +++L+ + VDE L KE + +NPDV+ Y+ I+N + +++
Sbjct: 959 PDLKTYSVLVDCLCMV---GRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015
Query: 373 KEIFDDMGKA-GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
+F++M + GI PD + Y+ L E+A ++ + +G PNV F +I
Sbjct: 1016 LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075
Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
G+ G + A V+ M G SPN T+E L
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 147/354 (41%), Gaps = 43/354 (12%)
Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI------------- 254
N+ T N ++ A + + E V M +K D TY TI
Sbjct: 113 NLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQA 172
Query: 255 -------------ATAYAQNGE---------ADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
AY+ NG +A EV M G +P+ +T ++ G
Sbjct: 173 PYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVG 232
Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG----VDEVLALMKEFR 348
K I + + M+ G+ PN+ F + I+ ++ R G E+L M +
Sbjct: 233 LGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIR----VLGRAGKINEAYEILKRMDDEG 288
Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
PDV+TY+ +++A TA +D KE+F+ M KPD Y L + ++ + +
Sbjct: 289 CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVK 348
Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
+ M + G P+VV FT ++ C G+ A + D M + G+ PNL T+ TL+ G
Sbjct: 349 QFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408
Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
+ A E+ M++ GV P T+++ + +G + A K+K K
Sbjct: 409 LRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 462
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 78 LMNSLIERGKPQEAQAIFNNL-IEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
++N L + + +EA +FN + G P L TY +L+ L I I ++++
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
G++P+ FNA+I +S SG E A + M G +P T TY L
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 183 bits (465), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 193/367 (52%), Gaps = 1/367 (0%)
Query: 91 AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
A +I +++ G++P VT +L+ + R + S++ ++ E G PD + +NA+I+
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198
Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
+ ++ + +A D F +++ G+ P TY L+ G + + ++ +LL M ++ +
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KIT 257
Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
PN+ TY+ L+ A+ + EA + +M + PD+VTY+++ + D+A ++
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
M G + + +I+G+CK ++++ ++ R M + G+ N V +N LI+GF +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
D D E + M F ++PD+ TY+ ++ G ++K IF+DM K + D
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
Y+ + +G + + E+A L ++ G P++V +TT++SG C+ G + ++ KM
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Query: 451 EHGVSPN 457
+ G+ N
Sbjct: 498 QEGLMKN 504
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 227/472 (48%), Gaps = 3/472 (0%)
Query: 87 KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
K +A +F+++++ PS+V + LL+A+ K+++ + S+ ++E G+ D FN
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
VIN F + A+ KM + G P T +L+ G+ + ++V L+D M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
G KP++ YN ++ + C K + +A++ ++ G++P+VVTY + +
Sbjct: 185 G-YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
A ++ +M + PN T ++ + K GK+ EA M + P++V ++ LI
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 327 GFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
G + DR D +++ LM DV++Y+T++N + A ++ ++F +M + G+
Sbjct: 304 GLC-LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
+ Y+ L +G+ + + +KA+E M G P++ + ++ G C +G +++A+ +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
F+ M + + ++ T+ T++ G + + A + + G+ P T+ +
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Query: 506 TGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQ 557
GL E + + +K+K + D + L K + P+LL+
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLK 534
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 44/283 (15%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V + + L+++ ++ GK EA+ +F ++ P +VTY++L+ L + R + + +
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
+ G D + +N +IN F ++ +E+ M F +M + GL T TYNTLI+G+ AG
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVL-------------------------------- 219
+++ + M G + P++ TYN+L
Sbjct: 380 DVDKAQEFFSQMDFFG-ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 220 ---VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
+R C + EAW++ ++ G+KPD+VTY T+ + G + E + +M+
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
G+ N T +G I + + M G P+L+
Sbjct: 499 EGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPSLL 533
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 207/425 (48%), Gaps = 4/425 (0%)
Query: 86 GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
G + A +F L G P+L T+ T++ + F + ++S+V+E G+ F
Sbjct: 254 GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFL 313
Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
N +I+A G + ++ + + P +TYN LI GK E +V LD S+
Sbjct: 314 NNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASK 373
Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
+G + PN +Y L++A+C K A ++ +MA G KPD+VTY + +G D
Sbjct: 374 KGLI-PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
A + V++ GV P+ +++SG CK G+ A M + + P+ ++ LI
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
GF+ D D +V +L E V DV+ ++ ++ + +G +D+ + M + +
Sbjct: 493 DGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLV 552
Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
PD YS + GYV++Q+ A ++ M ++ PNVV +T++I+G+C G A E
Sbjct: 553 PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEET 612
Query: 446 FDKMCEHGVSPNLKTFETLMWGYS-EARQPWRAEEILQIMKAFGVHPQKSTF--LLLAEA 502
F +M + PN+ T+ TL+ + E+ +A ++M P + TF LL
Sbjct: 613 FKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFV 672
Query: 503 RRATG 507
++ +G
Sbjct: 673 KKTSG 677
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/487 (23%), Positives = 217/487 (44%), Gaps = 14/487 (2%)
Query: 67 ESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
+S V + L++ L++ + +A+ +++ + + G + L+ + + +
Sbjct: 165 DSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVG 224
Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
++ G P+ +F+N +I + + G++E A F ++K G PT T+ T+I G
Sbjct: 225 RKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMING 284
Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
+ G S +LL + G ++ ++ N ++ A + + + A+ KP
Sbjct: 285 FCKEGDFVASDRLLSEVKERG-LRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKP 343
Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
DV TYN + + G+ + A + E G+ PN + +I YCK + A +
Sbjct: 344 DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403
Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
M E G P++V + +LI G V D + + + V+PD Y+ +M+
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463
Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
G K +F +M I PDA+ Y+ L G++R + ++A ++ +E G +VV
Sbjct: 464 GRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHH 523
Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
+I G+C G +D A+ ++M E + P+ T+ T++ GY + + A +I + M+
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEK 583
Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIP----VESLERL 542
P T+ L G K A +E EM+ + +P +L R
Sbjct: 584 NKCKPNVVTYTSLINGFCCQGDFKMA---------EETFKEMQLRDLVPNVVTYTTLIRS 634
Query: 543 YHKEATT 549
KE++T
Sbjct: 635 LAKESST 641
Score = 146 bits (368), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 188/408 (46%), Gaps = 2/408 (0%)
Query: 111 TTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF-WKMK 169
++ L L + FN I ++ + + + V++A++ESG++ +A++ + + ++
Sbjct: 103 SSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVE 162
Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
P N+L+ + + ++ K+ D M G+ N T +LV+ CNE +
Sbjct: 163 LYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTC-ILVKGMCNEGKV 221
Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
++ G P++V YNTI Y + G+ + A V E++ G P T G +
Sbjct: 222 EVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTM 281
Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
I+G+CKEG + R +KE G+ ++ N +I + E + +
Sbjct: 282 INGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDC 341
Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
PDV TY+ ++N G + D+ K G+ P+ +Y+ L + Y + +E + A +
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
LL+ M E G P++V + +I G G MD A+ + K+ + GVSP+ + LM G
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461
Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
+ + A+ + M + P + L + +G EA+++ S
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 214/485 (44%), Gaps = 29/485 (5%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V + L+N L + GK + A + + G P+ ++Y L+ A K ++ ++
Sbjct: 345 VATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLL 404
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
Q+ E G PD + + +I+ SG+M++A++ K+ + G++P + YN L+ G G
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
+ + KLL + N+ P+ Y L+ + + EA V G+K DVV +
Sbjct: 465 RFLPA-KLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHH 523
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
N + + ++G D+A + M + P+ T II GY K+ + A++ R M++
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEK 583
Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST-AGFMD 370
PN+V + LI GF D +E M+ + P+V+TY+T++ + + + ++
Sbjct: 584 NKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLE 643
Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ------EPEKA--------EELLMTMIE 416
K ++ M P+ ++ L +G+V++ EP+ + E M
Sbjct: 644 KAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKS 703
Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA--RQP 474
G+ + + + + C G + A DKM + G SP+ +F ++ G+ +
Sbjct: 704 DGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQ 763
Query: 475 WRAEEILQI-MKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEED 533
WR + + K V + S L E + EA IL + K T E
Sbjct: 764 WRNMDFCNLGEKGLEVAVRYSQVL---EQHLPQPVICEASTILHAMVEKADTKE------ 814
Query: 534 IPVES 538
PVES
Sbjct: 815 -PVES 818
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 36/232 (15%)
Query: 64 MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL----- 117
M K C+ V + T L+N +G + A+ F + P++VTYTTL+ +L
Sbjct: 581 MEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESS 640
Query: 118 TIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAF--------------SESGNMEEAMD 163
T++K +M+ N P+ + FN ++ F S G +
Sbjct: 641 TLEKAVYYWELMMT----NKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSE 696
Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
F +MK G + + YN+ + + G + + D M ++G P+ ++ ++ +
Sbjct: 697 FFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKG-FSPDPVSFAAILHGF 755
Query: 224 CNEKNITEAWNVMH--KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
C N ++ W M + G++ +A Y+Q E + VI E
Sbjct: 756 CVVGN-SKQWRNMDFCNLGEKGLE--------VAVRYSQVLEQHLPQPVICE 798
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 182 bits (462), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 213/448 (47%), Gaps = 2/448 (0%)
Query: 73 RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
RS L++ + GK + + F ++I G +P++ TY ++ + + + + +
Sbjct: 228 RSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEE 287
Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
++ G+ PD++ +N++I+ F + G +++ + F +MK+ P TYN LI + GK
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
++ M G +KPN+ +Y+ LV A+C E + +A M G+ P+ TY
Sbjct: 348 LPIGLEFYREMKGNG-LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406
Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
++ A + G A + EM GV+ N T +I G C ++KEA M
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
GV PNL +N LI GFV+ + D E+L +K + PD++ Y T + + ++
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
K + ++M + GIK ++ Y+ L Y + P + LL M E VV F +I G
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586
Query: 433 WCSDGSMDRAIEVFDKMC-EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
C + + +A++ F+++ + G+ N F ++ G + Q A + + M G+ P
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 646
Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKI 519
++ + L + G EA + K+
Sbjct: 647 DRTAYTSLMDGNFKQGNVLEALALRDKM 674
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/485 (23%), Positives = 227/485 (46%), Gaps = 37/485 (7%)
Query: 71 TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
TV + +++ + + G + A+ +F + G P VTY +++ R +
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320
Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
++++ +PD I +NA+IN F + G + ++ + +MK +GL P +Y+TL+ +
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380
Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
G ++++K M R G V PN TY L+ A C N+++A+ + ++M G++ +VVT
Sbjct: 381 GMMQQAIKFYVDMRRVGLV-PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT 439
Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
Y + +AEE+ +M+ GV PN + +I G+ K + AL +K
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 499
Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG--- 367
G+ P+L+++ I G + + V+ MKE + + + Y+T+M+A+ +G
Sbjct: 500 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 559
Query: 368 ----FMDKCKEI------------FDDMGK-----------------AGIKPDAHAYSIL 394
+D+ KE+ D + K G++ +A ++ +
Sbjct: 560 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAM 619
Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
G ++ + E A L M++ G P+ +T+++ G G++ A+ + DKM E G+
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679
Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
+L + +L+WG S Q +A L+ M G+HP + + + + G EA
Sbjct: 680 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 739
Query: 515 ILSKI 519
+ S +
Sbjct: 740 LQSYL 744
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 136/538 (25%), Positives = 239/538 (44%), Gaps = 52/538 (9%)
Query: 78 LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
L + LI+ G +EA F+ + P + LL + + + + G
Sbjct: 198 LFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAG 257
Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
P +N +I+ + G++E A F +MK GL P T TYN++I G+G G+ +++V
Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 317
Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
+ M ++ +P++ TYN L+ +C + +M +G+KP+VV+Y+T+ A
Sbjct: 318 CFFEEM-KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376
Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
+ + G QA + V+M G+ PN T +I CK G + +A R M + GV N
Sbjct: 377 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 436
Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
V+TY+ +++ A M + +E+F
Sbjct: 437 -----------------------------------VVTYTALIDGLCDAERMKEAEELFG 461
Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
M AG+ P+ +Y+ L G+V+ + ++A ELL + G P+++++ T I G CS
Sbjct: 462 KMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLE 521
Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
++ A V ++M E G+ N + TLM Y ++ P +L MK + TF
Sbjct: 522 KIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFC 581
Query: 498 LLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQ 557
+L + L +A ++I N A ++ L + EA T + ++Q
Sbjct: 582 VLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQ 641
Query: 558 ---IPN--VVSSDQKGSAAALKKGRML----LRD--ADSSLECSWFATTSMY--LSHS 602
+P+ +S G+ K+G +L LRD A+ ++ A TS+ LSH
Sbjct: 642 KGLVPDRTAYTSLMDGN---FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHC 696
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 190/382 (49%), Gaps = 2/382 (0%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V S + L+++ + G Q+A + ++ G P+ TYT+L+ A + + +
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
++ + G++ + + + A+I+ ++ M+EA + F KM +G+ P ++YN LI G+ A
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
+ +++LL+ + G +KP+L Y + C+ + I A VM++M G+K + + Y
Sbjct: 487 NMDRALELLNELKGRG-IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 545
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL-RFARTMK 310
T+ AY ++G + ++ EM+ ++ T ++I G CK + +A+ F R
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605
Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
++G+ N IF +I G + + + M + + PD Y+++M+ G +
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 665
Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
+ + D M + G+K D AY+ L G + +KA L MI G HP+ V+ +++
Sbjct: 666 EALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVL 725
Query: 431 SGWCSDGSMDRAIEVFDKMCEH 452
G +D A+E+ + +H
Sbjct: 726 KKHYELGCIDEAVELQSYLMKH 747
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 142/312 (45%)
Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
P ++ L + + EA KM + P + N + +A+ G+ D +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
+M G +P T I+I CKEG ++ A MK G+ P+ V +N +I GF +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
+ D MK+ PDVITY+ ++N + G + E + +M G+KP+ +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
YS L + +E ++A + + M G PN +T++I C G++ A + ++M
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
+ GV N+ T+ L+ G +A + AEE+ M GV P +++ L
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 511 EAKRILSKIKNK 522
A +L+++K +
Sbjct: 490 RALELLNELKGR 501
>sp|Q9SFV9|PP218_ARATH Pentatricopeptide repeat-containing protein At3g07290,
mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2
SV=1
Length = 880
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 207/430 (48%), Gaps = 36/430 (8%)
Query: 74 SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
S + L++ L E G+ +EA + + + E G +PS TYT L+ AL + + ++ ++
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327
Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
G P+ + +I+ G +EEA KM + + P+ TYN LI GY G+
Sbjct: 328 IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRV 387
Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
+ +LL +M + KPN+RT+N L+ C +A +++ +M +G+ PD+V+YN
Sbjct: 388 VPAFELLTVMEKRA-CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446
Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
+ + G + A +++ M ++P+ T II+ +CK+GK A F M G
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 314 VHPNLVIFNLLIKGFVEI-MDRDG-------------------------------VDEVL 341
+ + V LI G ++ RD V E L
Sbjct: 507 ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEEL 566
Query: 342 ALM---KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
A++ + + P V+TY+T+++ +G + I + M +G P+ + Y+I+ G
Sbjct: 567 AMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGL 626
Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
+ E+AE+LL M +SG PN V +T ++ G+ ++G +DRA+E M E G N
Sbjct: 627 CQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELND 686
Query: 459 KTFETLMWGY 468
+ + +L+ G+
Sbjct: 687 RIYSSLLQGF 696
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/545 (22%), Positives = 239/545 (43%), Gaps = 91/545 (16%)
Query: 64 MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
M ++ C+ + R+ T L+ +L +RG +A +F+ +I G KP++ TYT L+ L +
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGK 351
Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
+ + ++ ++ + P I +NA+IN + + G + A + M++ P T+N
Sbjct: 352 IEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411
Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
L++G GKP ++V LL M G + P++ +YNVL+ C E ++ A+ ++ M
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNG-LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCF 470
Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
++PD +T+ I A+ + G+AD A + M G+ + T +I G CK GK ++A
Sbjct: 471 DIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDA 530
Query: 303 LRFARTM-----------------------------------KEYGVHPNLVIFNLLIKG 327
L T+ + G+ P++V + L+ G
Sbjct: 531 LFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDG 590
Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
+ D G +L LMK P+V Y+ I+N G +++ +++ M +G+ P+
Sbjct: 591 LIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPN 650
Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW-------------- 433
Y+++ KGYV + ++A E + M+E G+ N I+++++ G+
Sbjct: 651 HVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEEST 710
Query: 434 ---------------------------------------CSDGSMDRAIEVFDKMCEHGV 454
C +G D + ++ + E GV
Sbjct: 711 VSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGV 770
Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
K + +M Y ++ + E++ ++ G P +F L+ + + G + A+
Sbjct: 771 FLE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARE 829
Query: 515 ILSKI 519
++ ++
Sbjct: 830 LVMEL 834
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 211/456 (46%), Gaps = 37/456 (8%)
Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
G ++ Y T++ AL + MS++ + G DS +++ F N+ +A
Sbjct: 190 GFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDA 249
Query: 162 MDTFWKM-KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
+ F M KE P + +Y+ LI G G+ EE+ L D M +G +P+ RTY VL+
Sbjct: 250 LKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG-CQPSTRTYTVLI 308
Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
+A C+ I +A+N+ +M G KP+V TY + ++G+ ++A V +M + +
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368
Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
P+ T +I+GYCK+G++ A M++ PN+ FN L++G + +
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
L M + ++PD+++Y+ +++ G M+ ++ M I+PD ++ + + +
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488
Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG----------------------S 438
+ + + A L M+ G + V TT+I G C G S
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548
Query: 439 MDRAIEVFDKMC-------------EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
++ +++ K C + G+ P++ T+ TL+ G + + IL++MK
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608
Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
G P + ++ G +EA+++LS +++
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQD 644
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 207/463 (44%), Gaps = 62/463 (13%)
Query: 64 MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
M K +C+ VR+ +LM L GKP +A + +++ G P +V+Y L+ L +
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
N+ + ++S + ++PD + F A+INAF + G + A M G++ T T
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 183 LIKGYGIAGKPEESV-------------------KLLDLMSREGNVK------------- 210
LI G GK +++ +LD++S+ VK
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576
Query: 211 --PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
P++ TY LV +IT ++ ++ M SG P+V Y I Q G ++AE
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
+++ M+ +GV PN T +++ GY GK+ AL R M E G N I++ L++GF
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Query: 329 VEIMDRDGVD----EVLALMKEFRVNPDVITYST----------------IMNAWSTAGF 368
V + + G+D ++ + +P+ I ++ G
Sbjct: 697 V--LSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGR 754
Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
D+ ++ ++ + G+ + A I+ + Y +++ K EL+ +++SGF P+ F
Sbjct: 755 TDESNDLVQNVLERGVFLE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCL 813
Query: 429 IISGWCSDGSMDRAIE-VFDKMCEHGV---SPNLKTFETLMWG 467
+I G +G +RA E V + + +GV S L E LM G
Sbjct: 814 VIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEG 856
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 136/310 (43%), Gaps = 42/310 (13%)
Query: 232 AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
A+ +M A G ++ Y TI A +NG + AE + ++ G + ++
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238
Query: 292 GYCKEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---MKEF 347
G+C+ +++AL+ M KE PN V +++LI G E+ ++E L M E
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEV---GRLEEAFGLKDQMGEK 295
Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
P TY+ ++ A G +DK +FD+M G KP+ H Y++L G R+ + E+A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355
Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMD--------------------------- 440
+ M++ P+V+ + +I+G+C DG +
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
Query: 441 --------RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
+A+ + +M ++G+SP++ ++ L+ G A ++L M F + P
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPD 475
Query: 493 KSTFLLLAEA 502
TF + A
Sbjct: 476 CLTFTAIINA 485
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 212/457 (46%), Gaps = 1/457 (0%)
Query: 77 KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
KL + + ++A A+F ++ PS+V +T LL A +R+ ++ ++E
Sbjct: 41 KLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY 100
Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
G+ D F +I+ F + A+ KM + G P+ T+ +L+ G+ + + ++
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
L+ LM + G +PN+ YN L+ C + A ++++M G+ DVVTYNT+ T
Sbjct: 161 FSLVILMVKSG-YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
+G A ++ +M + P+ T +I + K+G + EA + M + V P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279
Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
N V +N +I G + LM P+V+TY+T+++ + +D+ ++F
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
M G D Y+ L GY + + A ++ M+ P+++ ++ G C +
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399
Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
G ++ A+ FD M E + + ++ G +A + +A E+ + GV P T+
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Query: 497 LLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEED 533
++ G +EA ++ ++K + +M AE+D
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDD 496
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 193/382 (50%), Gaps = 3/382 (0%)
Query: 74 SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
S T L++ + A ++ +++ G++PS+VT+ +LL + R S++ +
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
++G +P+ + +N +I+ ++G + A++ +M++ GL TYNTL+ G +G+
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
++ ++L D+M R ++ P++ T+ L+ + + N+ EA + +M S + P+ VTYN
Sbjct: 228 SDAARMLRDMMKR--SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
+I +G A++ M G PN T +ISG+CK + E ++ + M
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
G + ++ +N LI G+ ++ ++ M RV PD+IT+ +++ G ++
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
FDDM ++ AY+I+ G + + EKA EL + G P+ +T +I G
Sbjct: 406 LVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465
Query: 433 WCSDGSMDRAIEVFDKMCEHGV 454
C +G A E+ +M E G+
Sbjct: 466 LCKNGPRREADELIRRMKEEGI 487
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 1/243 (0%)
Query: 72 VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
V + T L++ +++G EAQ ++ +I+ P+ VTY +++ L + R
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305
Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
+ G P+ + +N +I+ F + ++E M F +M G TYNTLI GY G
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
K ++ + M V P++ T+ +L+ C I A M S +V Y
Sbjct: 366 KLRVALDIFCWMVSR-RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424
Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
N + + + ++A E+ + GV+P+ RT I+I G CK G +EA R MKE
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484
Query: 312 YGV 314
G+
Sbjct: 485 EGI 487
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 232,696,571
Number of Sequences: 539616
Number of extensions: 9803371
Number of successful extensions: 38915
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 90
Number of HSP's that attempted gapping in prelim test: 26514
Number of HSP's gapped (non-prelim): 3237
length of query: 637
length of database: 191,569,459
effective HSP length: 124
effective length of query: 513
effective length of database: 124,657,075
effective search space: 63949079475
effective search space used: 63949079475
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)