Query 006633
Match_columns 637
No_of_seqs 596 out of 3272
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 04:49:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006633.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006633hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h2b_A SAM-dependent methyltra 99.6 1.6E-14 5.4E-19 139.9 12.9 137 219-360 42-178 (203)
2 4hg2_A Methyltransferase type 99.5 1.1E-14 3.8E-19 148.9 11.0 110 202-322 27-136 (257)
3 1pjz_A Thiopurine S-methyltran 99.5 2.4E-14 8.2E-19 140.3 9.4 99 219-320 23-139 (203)
4 3dh0_A SAM dependent methyltra 99.5 2.1E-13 7.1E-18 133.4 15.4 154 207-372 28-194 (219)
5 3l8d_A Methyltransferase; stru 99.5 1.5E-13 5.1E-18 136.3 14.3 149 204-361 43-197 (242)
6 3dli_A Methyltransferase; PSI- 99.5 3.5E-14 1.2E-18 141.6 9.7 152 201-359 25-179 (240)
7 1vl5_A Unknown conserved prote 99.5 8.3E-14 2.8E-18 140.4 12.6 110 206-322 27-141 (260)
8 1xtp_A LMAJ004091AAA; SGPP, st 99.5 2.7E-14 9.2E-19 142.7 8.6 148 204-360 81-234 (254)
9 3ujc_A Phosphoethanolamine N-m 99.5 1.1E-13 3.6E-18 138.9 12.5 118 200-322 39-160 (266)
10 3jwg_A HEN1, methyltransferase 99.5 3.1E-13 1.1E-17 132.5 15.2 115 201-320 14-140 (219)
11 2o57_A Putative sarcosine dime 99.5 1.3E-13 4.5E-18 141.6 12.8 116 200-322 62-188 (297)
12 4gek_A TRNA (CMO5U34)-methyltr 99.5 1.1E-13 3.9E-18 141.5 12.2 116 202-322 54-179 (261)
13 1nkv_A Hypothetical protein YJ 99.5 1.6E-13 5.5E-18 137.4 13.0 114 201-322 21-141 (256)
14 3hnr_A Probable methyltransfer 99.5 1.8E-13 6E-18 134.0 12.6 107 208-322 37-146 (220)
15 2p7i_A Hypothetical protein; p 99.5 3E-13 1E-17 133.7 13.8 101 219-325 43-145 (250)
16 3g5l_A Putative S-adenosylmeth 99.5 4.5E-13 1.5E-17 134.3 14.2 109 207-322 35-146 (253)
17 3lcc_A Putative methyl chlorid 99.5 5.6E-13 1.9E-17 132.3 14.8 130 220-360 68-203 (235)
18 2gb4_A Thiopurine S-methyltran 99.4 3.3E-13 1.1E-17 137.4 12.6 100 219-321 69-191 (252)
19 3bus_A REBM, methyltransferase 99.4 4.5E-13 1.5E-17 135.6 13.5 116 200-322 45-167 (273)
20 3e23_A Uncharacterized protein 99.4 2.5E-13 8.4E-18 132.5 10.7 134 219-360 44-178 (211)
21 3dlc_A Putative S-adenosyl-L-m 99.4 5E-13 1.7E-17 129.6 12.5 112 201-322 29-149 (219)
22 3i9f_A Putative type 11 methyl 99.4 4.4E-13 1.5E-17 126.0 11.7 103 210-322 11-113 (170)
23 2xvm_A Tellurite resistance pr 99.4 1E-12 3.5E-17 125.9 14.2 109 208-322 24-137 (199)
24 1xxl_A YCGJ protein; structura 99.4 6.8E-13 2.3E-17 132.5 13.2 110 206-322 11-125 (239)
25 3jwh_A HEN1; methyltransferase 99.4 6.5E-13 2.2E-17 130.2 12.2 115 202-321 15-141 (217)
26 2yqz_A Hypothetical protein TT 99.4 9E-13 3.1E-17 132.0 13.5 97 219-320 40-140 (263)
27 3ccf_A Cyclopropane-fatty-acyl 99.4 1.2E-12 4.3E-17 133.4 14.3 108 207-322 48-155 (279)
28 3ege_A Putative methyltransfer 99.4 4.5E-13 1.5E-17 135.7 10.9 112 202-322 20-131 (261)
29 1y8c_A S-adenosylmethionine-de 99.4 1.7E-12 6E-17 128.2 14.6 118 201-322 20-143 (246)
30 3thr_A Glycine N-methyltransfe 99.4 4.4E-13 1.5E-17 137.3 10.4 116 202-322 43-176 (293)
31 3cgg_A SAM-dependent methyltra 99.4 2.6E-12 8.9E-17 122.0 14.8 124 219-360 47-171 (195)
32 2p35_A Trans-aconitate 2-methy 99.4 7.4E-13 2.5E-17 132.6 11.2 110 205-322 22-133 (259)
33 3ou2_A SAM-dependent methyltra 99.4 8.9E-13 3.1E-17 128.2 11.3 111 206-322 35-147 (218)
34 3bkw_A MLL3908 protein, S-aden 99.4 1.6E-12 5.5E-17 128.7 13.3 109 207-322 34-145 (243)
35 3pfg_A N-methyltransferase; N, 99.4 1.3E-12 4.3E-17 131.9 12.5 113 205-321 37-151 (263)
36 4htf_A S-adenosylmethionine-de 99.4 1.1E-12 3.6E-17 134.2 12.0 99 219-322 69-174 (285)
37 4e2x_A TCAB9; kijanose, tetron 99.4 7.8E-14 2.7E-18 150.8 3.5 153 201-360 92-249 (416)
38 3dtn_A Putative methyltransfer 99.4 1.4E-12 4.8E-17 128.9 12.3 116 202-322 29-149 (234)
39 2gs9_A Hypothetical protein TT 99.4 1.8E-12 6E-17 126.2 12.6 98 218-323 36-134 (211)
40 2ex4_A Adrenal gland protein A 99.4 1E-12 3.5E-17 131.0 11.0 136 219-360 80-221 (241)
41 3ofk_A Nodulation protein S; N 99.4 1.6E-12 5.6E-17 126.9 12.0 113 206-324 41-157 (216)
42 3cc8_A Putative methyltransfer 99.4 3.5E-12 1.2E-16 124.5 14.0 107 207-323 24-132 (230)
43 2avn_A Ubiquinone/menaquinone 99.4 1.6E-12 5.4E-17 131.4 11.9 99 219-322 55-153 (260)
44 3vc1_A Geranyl diphosphate 2-C 99.4 4.2E-12 1.4E-16 132.0 15.3 109 206-322 106-222 (312)
45 1kpg_A CFA synthase;, cyclopro 99.4 2.3E-12 7.9E-17 131.7 13.1 113 202-322 50-169 (287)
46 3mgg_A Methyltransferase; NYSG 99.4 3E-12 1E-16 129.9 13.7 99 219-322 38-143 (276)
47 1ve3_A Hypothetical protein PH 99.4 3.1E-12 1E-16 125.3 12.7 101 219-322 39-143 (227)
48 3kkz_A Uncharacterized protein 99.4 3E-12 1E-16 129.6 12.6 113 202-322 31-151 (267)
49 3f4k_A Putative methyltransfer 99.4 2.7E-12 9.2E-17 128.5 12.1 111 202-322 31-151 (257)
50 1dus_A MJ0882; hypothetical pr 99.3 1.3E-11 4.5E-16 117.1 15.5 132 184-322 19-158 (194)
51 3e8s_A Putative SAM dependent 99.3 5.6E-12 1.9E-16 122.8 13.0 107 207-322 43-153 (227)
52 3sm3_A SAM-dependent methyltra 99.3 4.8E-12 1.6E-16 124.2 12.1 101 219-324 31-144 (235)
53 2kw5_A SLR1183 protein; struct 99.3 6.9E-12 2.4E-16 121.1 12.7 99 221-324 32-134 (202)
54 2p8j_A S-adenosylmethionine-de 99.3 4.2E-12 1.4E-16 123.0 11.0 101 219-322 24-129 (209)
55 3g5t_A Trans-aconitate 3-methy 99.3 6.2E-12 2.1E-16 129.7 12.6 111 202-321 23-149 (299)
56 3hem_A Cyclopropane-fatty-acyl 99.3 7.2E-12 2.5E-16 129.3 13.0 113 202-322 58-184 (302)
57 3ocj_A Putative exported prote 99.3 1.9E-11 6.4E-16 126.7 15.8 98 219-322 119-228 (305)
58 1vlm_A SAM-dependent methyltra 99.3 1.3E-11 4.3E-16 121.5 13.7 94 219-323 48-141 (219)
59 2fk8_A Methoxy mycolic acid sy 99.3 6.6E-12 2.2E-16 130.5 11.9 113 202-322 76-195 (318)
60 3m70_A Tellurite resistance pr 99.3 1E-11 3.4E-16 127.0 13.1 100 219-322 121-224 (286)
61 3gu3_A Methyltransferase; alph 99.3 1.1E-11 3.6E-16 127.3 13.2 113 203-323 8-128 (284)
62 3bxo_A N,N-dimethyltransferase 99.3 8.1E-12 2.8E-16 123.3 11.5 100 219-322 41-142 (239)
63 3htx_A HEN1; HEN1, small RNA m 99.3 2.4E-11 8.3E-16 140.2 17.0 124 195-324 700-837 (950)
64 4fsd_A Arsenic methyltransfera 99.3 1.4E-11 4.7E-16 132.4 13.9 99 219-322 84-204 (383)
65 3mti_A RRNA methylase; SAM-dep 99.3 1.4E-11 4.8E-16 117.5 12.4 101 219-322 23-136 (185)
66 2pxx_A Uncharacterized protein 99.3 6.2E-12 2.1E-16 121.7 9.7 101 219-322 43-160 (215)
67 2aot_A HMT, histamine N-methyl 99.3 5.4E-12 1.8E-16 130.0 9.3 100 218-322 52-173 (292)
68 3grz_A L11 mtase, ribosomal pr 99.3 2.2E-11 7.4E-16 118.3 12.4 148 197-373 39-198 (205)
69 3p9n_A Possible methyltransfer 99.3 2E-11 6.9E-16 117.2 11.9 121 200-322 25-154 (189)
70 2zfu_A Nucleomethylin, cerebra 99.3 2.9E-11 1E-15 118.0 13.1 120 219-372 68-192 (215)
71 3iv6_A Putative Zn-dependent a 99.3 1.1E-11 3.6E-16 127.2 10.1 112 204-322 33-149 (261)
72 1zx0_A Guanidinoacetate N-meth 99.3 8.8E-12 3E-16 124.1 8.9 115 201-321 46-170 (236)
73 2vdw_A Vaccinia virus capping 99.2 1.8E-11 6.2E-16 127.8 10.3 99 219-322 49-170 (302)
74 1wzn_A SAM-dependent methyltra 99.2 3.9E-11 1.3E-15 119.9 12.4 100 219-322 42-146 (252)
75 2g72_A Phenylethanolamine N-me 99.2 1.1E-11 3.8E-16 127.1 8.6 152 203-360 56-252 (289)
76 3g2m_A PCZA361.24; SAM-depende 99.2 1.6E-11 5.4E-16 126.6 9.7 114 203-323 70-192 (299)
77 3orh_A Guanidinoacetate N-meth 99.2 1.1E-11 3.7E-16 124.4 7.7 109 202-320 47-169 (236)
78 3g07_A 7SK snRNA methylphospha 99.2 1.1E-11 3.7E-16 128.2 7.9 102 218-322 46-221 (292)
79 3dmg_A Probable ribosomal RNA 99.2 3.2E-11 1.1E-15 130.0 11.8 118 202-322 217-341 (381)
80 1ri5_A MRNA capping enzyme; me 99.2 3E-11 1E-15 123.2 10.3 101 219-322 65-175 (298)
81 2i62_A Nicotinamide N-methyltr 99.2 1.7E-11 6E-16 122.8 8.1 148 207-360 45-235 (265)
82 3e05_A Precorrin-6Y C5,15-meth 99.2 4.4E-10 1.5E-14 109.0 17.8 108 203-322 27-143 (204)
83 3ggd_A SAM-dependent methyltra 99.2 2.1E-11 7.1E-16 121.5 8.5 101 219-322 57-164 (245)
84 3d2l_A SAM-dependent methyltra 99.2 6.8E-11 2.3E-15 116.9 12.0 112 202-322 21-138 (243)
85 2a14_A Indolethylamine N-methy 99.2 9.7E-12 3.3E-16 126.4 5.7 117 206-322 43-198 (263)
86 3bgv_A MRNA CAP guanine-N7 met 99.2 5.8E-11 2E-15 123.3 11.1 113 205-322 21-156 (313)
87 3njr_A Precorrin-6Y methylase; 99.2 4.4E-10 1.5E-14 110.2 16.4 106 205-322 44-155 (204)
88 3m33_A Uncharacterized protein 99.2 3.5E-11 1.2E-15 119.1 8.3 90 219-319 49-140 (226)
89 3bkx_A SAM-dependent methyltra 99.2 5.4E-11 1.9E-15 120.3 9.3 114 204-322 31-160 (275)
90 2r3s_A Uncharacterized protein 99.2 2.3E-10 7.8E-15 119.4 14.2 115 204-323 151-273 (335)
91 3hp7_A Hemolysin, putative; st 99.2 3.3E-10 1.1E-14 117.8 14.9 131 219-359 86-227 (291)
92 3mq2_A 16S rRNA methyltransfer 99.1 1.3E-10 4.4E-15 113.8 11.2 138 219-360 28-180 (218)
93 1p91_A Ribosomal RNA large sub 99.1 1.3E-10 4.6E-15 117.4 11.4 93 219-323 86-180 (269)
94 1yzh_A TRNA (guanine-N(7)-)-me 99.1 3.3E-10 1.1E-14 111.0 13.8 102 219-322 42-157 (214)
95 3hm2_A Precorrin-6Y C5,15-meth 99.1 5.1E-10 1.7E-14 105.2 14.2 109 202-322 11-128 (178)
96 3lbf_A Protein-L-isoaspartate 99.1 1.8E-10 6.3E-15 111.9 11.4 108 203-323 64-176 (210)
97 3v97_A Ribosomal RNA large sub 99.1 2.4E-10 8.4E-15 132.2 13.6 123 478-602 540-679 (703)
98 2fca_A TRNA (guanine-N(7)-)-me 99.1 2.1E-10 7E-15 113.1 11.1 100 219-322 39-154 (213)
99 1vbf_A 231AA long hypothetical 99.1 2.8E-10 9.6E-15 112.2 12.1 108 203-323 57-167 (231)
100 3q87_B N6 adenine specific DNA 99.1 2.9E-10 1E-14 108.0 11.7 115 219-360 24-145 (170)
101 2yxd_A Probable cobalt-precorr 99.1 7.9E-10 2.7E-14 103.9 14.5 136 202-368 21-161 (183)
102 2nxc_A L11 mtase, ribosomal pr 99.1 2.7E-10 9.2E-15 115.5 11.6 118 219-360 121-240 (254)
103 3evz_A Methyltransferase; NYSG 99.1 1.1E-09 3.8E-14 107.8 15.8 122 219-359 56-201 (230)
104 3lpm_A Putative methyltransfer 99.1 7.8E-10 2.7E-14 111.9 15.0 119 197-322 31-177 (259)
105 3gwz_A MMCR; methyltransferase 99.1 7.1E-10 2.4E-14 118.4 15.2 109 206-322 192-308 (369)
106 2ift_A Putative methylase HI07 99.1 2.3E-10 7.7E-15 111.7 10.3 116 201-324 37-166 (201)
107 3mcz_A O-methyltransferase; ad 99.1 3.6E-10 1.2E-14 119.1 12.2 162 207-372 169-350 (352)
108 1af7_A Chemotaxis receptor met 99.1 3E-10 1E-14 117.2 11.2 99 219-320 106-251 (274)
109 1xdz_A Methyltransferase GIDB; 99.1 7.9E-10 2.7E-14 110.5 13.6 92 219-321 71-174 (240)
110 2qe6_A Uncharacterized protein 99.1 5E-10 1.7E-14 115.1 12.5 116 203-322 63-197 (274)
111 3dxy_A TRNA (guanine-N(7)-)-me 99.1 1.4E-10 4.8E-15 115.2 7.9 102 219-322 35-151 (218)
112 3dp7_A SAM-dependent methyltra 99.1 3E-10 1E-14 121.0 10.9 99 219-322 180-288 (363)
113 3i53_A O-methyltransferase; CO 99.1 2.8E-10 9.5E-15 119.2 10.3 98 219-322 170-275 (332)
114 3eey_A Putative rRNA methylase 99.1 4.1E-10 1.4E-14 108.4 10.7 99 219-322 23-140 (197)
115 3q7e_A Protein arginine N-meth 99.1 7.3E-10 2.5E-14 117.7 13.5 98 220-320 68-172 (349)
116 1ws6_A Methyltransferase; stru 99.1 1.5E-10 5.1E-15 108.0 7.2 118 200-324 23-150 (171)
117 3uwp_A Histone-lysine N-methyl 99.1 1.1E-10 3.7E-15 126.5 7.0 122 196-322 153-289 (438)
118 1l3i_A Precorrin-6Y methyltran 99.1 1.9E-09 6.5E-14 101.8 14.8 110 202-322 19-135 (192)
119 2fhp_A Methylase, putative; al 99.1 4.4E-10 1.5E-14 106.5 10.1 121 198-323 25-156 (187)
120 2fyt_A Protein arginine N-meth 99.1 7.8E-10 2.7E-14 117.1 13.0 112 202-319 50-169 (340)
121 3g89_A Ribosomal RNA small sub 99.1 1.2E-09 4.1E-14 110.7 13.9 121 218-360 80-208 (249)
122 1x19_A CRTF-related protein; m 99.1 8.2E-10 2.8E-14 117.0 12.9 112 205-322 179-296 (359)
123 2pwy_A TRNA (adenine-N(1)-)-me 99.0 1.5E-09 5.3E-14 108.4 14.1 105 206-322 86-199 (258)
124 2ld4_A Anamorsin; methyltransf 99.0 4E-10 1.4E-14 106.8 9.1 113 218-356 12-128 (176)
125 2b3t_A Protein methyltransfera 99.0 3.1E-09 1.1E-13 108.5 16.4 115 201-322 95-239 (276)
126 3fpf_A Mtnas, putative unchara 99.0 9.6E-10 3.3E-14 114.5 12.6 101 210-322 116-223 (298)
127 2fpo_A Methylase YHHF; structu 99.0 8.2E-10 2.8E-14 107.8 11.3 114 201-322 38-161 (202)
128 4dcm_A Ribosomal RNA large sub 99.0 3E-10 1E-14 122.1 8.8 121 196-322 202-335 (375)
129 1ej0_A FTSJ; methyltransferase 99.0 6.9E-10 2.4E-14 103.0 10.0 91 219-322 23-137 (180)
130 2esr_A Methyltransferase; stru 99.0 2.9E-10 9.8E-15 107.5 6.8 114 202-323 16-140 (177)
131 3lst_A CALO1 methyltransferase 99.0 1.3E-09 4.3E-14 115.3 12.4 107 207-322 175-287 (348)
132 1nt2_A Fibrillarin-like PRE-rR 99.0 1.5E-09 5.1E-14 107.1 12.1 96 219-321 58-161 (210)
133 1qzz_A RDMB, aclacinomycin-10- 99.0 8.9E-10 3E-14 116.9 11.1 108 207-322 173-288 (374)
134 2yxe_A Protein-L-isoaspartate 99.0 1.8E-09 6.2E-14 105.2 12.2 105 204-322 65-178 (215)
135 2y1w_A Histone-arginine methyl 99.0 2.3E-09 7.7E-14 113.8 13.9 115 202-321 36-155 (348)
136 1i9g_A Hypothetical protein RV 99.0 2.8E-09 9.7E-14 108.2 14.1 106 205-322 88-204 (280)
137 2ip2_A Probable phenazine-spec 99.0 1.7E-09 5.9E-14 113.1 12.7 112 205-322 157-273 (334)
138 3ckk_A TRNA (guanine-N(7)-)-me 99.0 9.2E-10 3.1E-14 110.6 10.2 103 219-322 47-169 (235)
139 3reo_A (ISO)eugenol O-methyltr 99.0 7.6E-10 2.6E-14 118.3 10.0 96 219-322 204-301 (368)
140 1dl5_A Protein-L-isoaspartate 99.0 1.5E-09 5E-14 113.5 11.9 105 203-322 62-176 (317)
141 2frn_A Hypothetical protein PH 99.0 2.2E-09 7.4E-14 110.4 12.9 143 195-360 106-253 (278)
142 1fp1_D Isoliquiritigenin 2'-O- 99.0 8.7E-10 3E-14 117.6 10.3 95 219-321 210-306 (372)
143 4dzr_A Protein-(glutamine-N5) 99.0 2.5E-10 8.5E-15 110.2 5.4 114 201-321 14-165 (215)
144 3p9c_A Caffeic acid O-methyltr 99.0 9.9E-10 3.4E-14 117.2 10.6 96 219-322 202-299 (364)
145 3r0q_C Probable protein argini 99.0 2.3E-09 8E-14 115.0 13.6 115 202-321 49-169 (376)
146 3sso_A Methyltransferase; macr 99.0 4.4E-10 1.5E-14 121.3 7.9 92 219-322 217-325 (419)
147 3mb5_A SAM-dependent methyltra 99.0 3.5E-09 1.2E-13 106.1 14.0 105 205-322 82-195 (255)
148 1yb2_A Hypothetical protein TA 99.0 1.7E-09 5.9E-14 110.4 11.9 103 207-322 101-212 (275)
149 2pjd_A Ribosomal RNA small sub 99.0 6.1E-10 2.1E-14 117.8 8.4 119 199-322 179-304 (343)
150 1fbn_A MJ fibrillarin homologu 99.0 5E-09 1.7E-13 104.0 14.2 93 219-320 75-177 (230)
151 3p2e_A 16S rRNA methylase; met 99.0 9.4E-10 3.2E-14 109.8 8.9 97 219-320 25-138 (225)
152 1g6q_1 HnRNP arginine N-methyl 99.0 4.1E-09 1.4E-13 110.9 14.3 114 202-319 24-143 (328)
153 1tw3_A COMT, carminomycin 4-O- 99.0 1.9E-09 6.6E-14 113.9 11.7 112 207-323 174-290 (360)
154 1jsx_A Glucose-inhibited divis 99.0 1.8E-09 6E-14 104.5 10.4 107 204-322 50-166 (207)
155 1jg1_A PIMT;, protein-L-isoasp 98.9 4.2E-09 1.4E-13 104.8 12.4 109 202-322 77-190 (235)
156 3bzb_A Uncharacterized protein 98.9 6.3E-09 2.2E-13 106.9 13.9 117 201-321 64-205 (281)
157 3tfw_A Putative O-methyltransf 98.9 1.6E-08 5.6E-13 101.8 16.3 95 220-322 65-171 (248)
158 3e8s_A Putative SAM dependent 98.9 2.7E-09 9.1E-14 103.8 10.1 136 478-620 53-227 (227)
159 1i1n_A Protein-L-isoaspartate 98.9 5.1E-09 1.8E-13 102.9 12.2 108 207-323 66-184 (226)
160 3gdh_A Trimethylguanosine synt 98.9 1E-10 3.6E-15 116.3 -0.1 96 219-320 79-180 (241)
161 3opn_A Putative hemolysin; str 98.9 2.9E-09 9.8E-14 107.0 10.1 131 219-360 38-180 (232)
162 2ozv_A Hypothetical protein AT 98.9 3.9E-09 1.3E-13 107.3 11.2 110 208-322 28-171 (260)
163 4df3_A Fibrillarin-like rRNA/T 98.9 6.8E-10 2.3E-14 111.9 5.4 101 213-321 74-182 (233)
164 3fzg_A 16S rRNA methylase; met 98.9 9.4E-10 3.2E-14 107.6 6.0 110 201-320 36-151 (200)
165 3ntv_A MW1564 protein; rossman 98.9 8.4E-09 2.9E-13 102.7 13.1 104 206-321 61-176 (232)
166 2pbf_A Protein-L-isoaspartate 98.9 4.9E-09 1.7E-13 103.2 10.7 91 219-322 81-194 (227)
167 1o9g_A RRNA methyltransferase; 98.9 2.9E-09 9.9E-14 106.9 8.9 99 219-322 52-215 (250)
168 1r18_A Protein-L-isoaspartate( 98.9 8.1E-09 2.8E-13 102.0 11.6 109 205-322 71-195 (227)
169 1u2z_A Histone-lysine N-methyl 98.9 5.5E-09 1.9E-13 114.3 11.2 116 202-322 228-360 (433)
170 1o54_A SAM-dependent O-methylt 98.9 1.4E-08 4.8E-13 103.5 13.6 104 206-322 102-214 (277)
171 2ipx_A RRNA 2'-O-methyltransfe 98.9 5.5E-09 1.9E-13 103.6 10.1 98 219-322 78-183 (233)
172 2bm8_A Cephalosporin hydroxyla 98.9 2.1E-09 7.2E-14 107.9 7.0 92 220-321 83-187 (236)
173 3u81_A Catechol O-methyltransf 98.9 4E-09 1.4E-13 103.9 8.9 106 207-322 49-171 (221)
174 3dr5_A Putative O-methyltransf 98.9 2.4E-08 8.4E-13 99.2 14.6 94 220-321 58-163 (221)
175 2yvl_A TRMI protein, hypotheti 98.9 9.5E-09 3.2E-13 102.0 11.6 105 206-322 81-191 (248)
176 2plw_A Ribosomal RNA methyltra 98.9 4.4E-09 1.5E-13 101.2 8.8 92 219-322 23-155 (201)
177 1fp2_A Isoflavone O-methyltran 98.9 3.7E-09 1.3E-13 111.8 8.8 96 219-322 189-289 (352)
178 3bwc_A Spermidine synthase; SA 98.8 1.1E-08 3.8E-13 106.6 12.0 99 219-322 96-211 (304)
179 4a6d_A Hydroxyindole O-methylt 98.8 5.1E-08 1.7E-12 103.6 17.2 108 207-322 170-284 (353)
180 3tr6_A O-methyltransferase; ce 98.8 1.8E-08 6.2E-13 98.8 12.5 95 220-322 66-175 (225)
181 3dmg_A Probable ribosomal RNA 98.8 3.7E-08 1.3E-12 106.1 15.7 112 477-593 233-355 (381)
182 3b3j_A Histone-arginine methyl 98.8 8.1E-09 2.8E-13 114.5 10.8 111 203-320 145-262 (480)
183 1ne2_A Hypothetical protein TA 98.8 2.6E-08 8.8E-13 96.2 13.1 93 219-320 52-145 (200)
184 3id6_C Fibrillarin-like rRNA/T 98.8 1.4E-08 4.7E-13 102.3 11.5 108 206-322 63-182 (232)
185 2gpy_A O-methyltransferase; st 98.8 1.1E-08 3.6E-13 101.4 10.3 107 205-321 43-160 (233)
186 3duw_A OMT, O-methyltransferas 98.8 3.2E-08 1.1E-12 97.0 13.6 95 220-322 60-168 (223)
187 3tma_A Methyltransferase; thum 98.8 2.4E-08 8.1E-13 105.8 13.1 116 204-322 191-318 (354)
188 4dcm_A Ribosomal RNA large sub 98.8 2.3E-07 7.8E-12 99.7 20.8 114 478-593 223-349 (375)
189 2vdv_E TRNA (guanine-N(7)-)-me 98.8 1.7E-08 5.7E-13 101.3 10.9 103 219-322 50-174 (246)
190 2b25_A Hypothetical protein; s 98.8 1.5E-08 5.2E-13 106.4 10.6 104 205-322 94-220 (336)
191 1ixk_A Methyltransferase; open 98.8 3.2E-08 1.1E-12 103.6 13.0 108 208-322 110-247 (315)
192 2xvm_A Tellurite resistance pr 98.8 5.8E-09 2E-13 99.6 6.7 118 478-603 33-171 (199)
193 3hnr_A Probable methyltransfer 98.8 7.2E-09 2.5E-13 101.0 7.4 133 477-620 45-212 (220)
194 3h2b_A SAM-dependent methyltra 98.8 1.2E-08 4.1E-13 98.4 8.6 136 478-620 42-195 (203)
195 1kpg_A CFA synthase;, cyclopro 98.8 1.2E-08 4E-13 104.1 8.9 101 476-580 63-168 (287)
196 3r3h_A O-methyltransferase, SA 98.8 2.8E-08 9.6E-13 100.0 11.5 97 220-322 62-171 (242)
197 3pfg_A N-methyltransferase; N, 98.8 1.8E-08 6.2E-13 101.3 10.1 135 478-620 51-249 (263)
198 3c3p_A Methyltransferase; NP_9 98.8 1.7E-08 5.9E-13 98.3 9.6 91 220-321 58-160 (210)
199 2h00_A Methyltransferase 10 do 98.8 3.2E-09 1.1E-13 106.6 4.2 101 219-320 66-191 (254)
200 3jwg_A HEN1, methyltransferase 98.8 2.6E-08 8.8E-13 97.3 10.6 140 478-620 30-210 (219)
201 1g8a_A Fibrillarin-like PRE-rR 98.8 2.4E-08 8E-13 98.4 10.2 94 219-321 74-178 (227)
202 2hnk_A SAM-dependent O-methylt 98.8 1.3E-07 4.5E-12 94.1 15.7 105 207-321 51-181 (239)
203 3hem_A Cyclopropane-fatty-acyl 98.7 1.2E-08 4.2E-13 105.1 8.2 102 476-580 71-183 (302)
204 1zg3_A Isoflavanone 4'-O-methy 98.7 1.4E-08 4.8E-13 107.6 8.8 95 220-322 195-294 (358)
205 3a27_A TYW2, uncharacterized p 98.7 7.3E-08 2.5E-12 98.6 13.9 96 219-322 120-220 (272)
206 4azs_A Methyltransferase WBDD; 98.7 2.5E-09 8.6E-14 120.8 3.2 101 218-321 66-173 (569)
207 3ofk_A Nodulation protein S; N 98.7 1.8E-08 6E-13 98.1 8.7 99 476-580 50-154 (216)
208 3mti_A RRNA methylase; SAM-dep 98.7 1.6E-08 5.6E-13 96.0 8.1 139 478-619 23-183 (185)
209 2zfu_A Nucleomethylin, cerebra 98.7 8.8E-08 3E-12 93.2 13.3 149 449-620 27-191 (215)
210 3i9f_A Putative type 11 methyl 98.7 2.6E-08 9E-13 93.2 9.1 132 476-621 16-161 (170)
211 3dli_A Methyltransferase; PSI- 98.7 8.2E-09 2.8E-13 102.6 5.9 97 478-580 42-140 (240)
212 1y8c_A S-adenosylmethionine-de 98.7 5.6E-08 1.9E-12 95.7 11.8 98 477-579 37-141 (246)
213 3adn_A Spermidine synthase; am 98.7 3.2E-08 1.1E-12 102.9 10.5 103 218-321 83-198 (294)
214 3giw_A Protein of unknown func 98.7 1.7E-08 5.9E-13 104.0 8.1 117 202-322 63-201 (277)
215 3tm4_A TRNA (guanine N2-)-meth 98.7 1E-07 3.4E-12 102.1 14.2 132 203-360 205-348 (373)
216 3ocj_A Putative exported prote 98.7 1.8E-08 6.1E-13 104.2 8.1 137 478-620 119-304 (305)
217 2nyu_A Putative ribosomal RNA 98.7 5.2E-08 1.8E-12 93.1 10.5 92 219-322 23-146 (196)
218 1nv8_A HEMK protein; class I a 98.7 1.3E-07 4.3E-12 97.7 14.1 116 200-322 107-250 (284)
219 1xtp_A LMAJ004091AAA; SGPP, st 98.7 8.7E-09 3E-13 102.5 5.1 129 468-602 85-235 (254)
220 1xj5_A Spermidine synthase 1; 98.7 1.2E-07 4.3E-12 100.2 14.2 97 219-321 121-235 (334)
221 2p7i_A Hypothetical protein; p 98.7 1E-08 3.4E-13 101.0 5.5 95 479-580 44-141 (250)
222 2wa2_A Non-structural protein 98.7 9.8E-09 3.4E-13 105.9 5.2 95 219-322 83-194 (276)
223 3cbg_A O-methyltransferase; cy 98.7 1E-07 3.5E-12 94.9 12.4 93 220-322 74-183 (232)
224 2igt_A SAM dependent methyltra 98.7 4.5E-08 1.5E-12 103.5 10.1 113 205-322 141-273 (332)
225 2oxt_A Nucleoside-2'-O-methylt 98.7 1.3E-08 4.6E-13 104.2 5.9 95 219-322 75-186 (265)
226 3dlc_A Putative S-adenosyl-L-m 98.7 3.4E-08 1.2E-12 95.4 8.3 94 480-580 46-148 (219)
227 1xdz_A Methyltransferase GIDB; 98.7 1.4E-07 4.8E-12 94.0 12.8 161 453-624 47-223 (240)
228 4e2x_A TCAB9; kijanose, tetron 98.7 1.4E-08 4.8E-13 109.5 6.0 144 451-602 81-250 (416)
229 2fk8_A Methoxy mycolic acid sy 98.7 3.3E-08 1.1E-12 102.4 8.6 101 476-580 89-194 (318)
230 4hg2_A Methyltransferase type 98.7 1.2E-08 4.2E-13 104.0 5.1 94 478-579 40-134 (257)
231 4hc4_A Protein arginine N-meth 98.7 1.3E-07 4.5E-12 101.7 13.2 114 202-320 69-188 (376)
232 3ou2_A SAM-dependent methyltra 98.7 1.7E-08 5.9E-13 97.7 5.6 100 478-581 47-147 (218)
233 2avd_A Catechol-O-methyltransf 98.7 1.2E-07 4.1E-12 93.2 11.6 97 220-322 71-180 (229)
234 1vl5_A Unknown conserved prote 98.6 2.3E-08 7.9E-13 100.4 6.6 97 476-580 36-140 (260)
235 3ajd_A Putative methyltransfer 98.6 5.9E-08 2E-12 99.3 9.6 110 209-322 76-212 (274)
236 3gjy_A Spermidine synthase; AP 98.6 6.1E-08 2.1E-12 101.9 9.8 98 220-321 91-200 (317)
237 1wy7_A Hypothetical protein PH 98.6 9.1E-07 3.1E-11 85.4 17.4 94 219-320 50-148 (207)
238 3dou_A Ribosomal RNA large sub 98.6 7E-08 2.4E-12 93.7 9.3 93 219-322 26-140 (191)
239 3kkz_A Uncharacterized protein 98.6 4.1E-08 1.4E-12 99.1 7.8 97 476-580 45-150 (267)
240 3orh_A Guanidinoacetate N-meth 98.6 1.7E-08 5.9E-13 101.0 4.7 101 477-579 60-169 (236)
241 3e23_A Uncharacterized protein 98.6 4.4E-08 1.5E-12 95.0 7.3 119 478-602 44-179 (211)
242 3eey_A Putative rRNA methylase 98.6 6.5E-08 2.2E-12 92.8 8.3 142 478-621 23-189 (197)
243 2qm3_A Predicted methyltransfe 98.6 3.6E-07 1.2E-11 97.7 14.9 96 219-321 173-278 (373)
244 3e05_A Precorrin-6Y C5,15-meth 98.6 9.8E-08 3.4E-12 92.3 9.6 147 444-601 10-164 (204)
245 1dus_A MJ0882; hypothetical pr 98.6 3.7E-08 1.3E-12 93.1 6.4 132 477-619 52-193 (194)
246 3thr_A Glycine N-methyltransfe 98.6 2.2E-08 7.6E-13 102.1 5.2 100 478-581 58-176 (293)
247 3ujc_A Phosphoethanolamine N-m 98.6 1.4E-08 4.8E-13 101.4 3.4 99 476-580 54-159 (266)
248 1uir_A Polyamine aminopropyltr 98.6 8.8E-08 3E-12 100.3 9.6 97 219-321 78-195 (314)
249 1nkv_A Hypothetical protein YJ 98.6 3.3E-08 1.1E-12 98.6 6.1 96 477-580 36-140 (256)
250 2p41_A Type II methyltransfera 98.6 3.6E-08 1.2E-12 103.0 6.6 98 219-322 83-192 (305)
251 2yxd_A Probable cobalt-precorr 98.6 5.3E-08 1.8E-12 91.2 7.1 110 478-602 36-154 (183)
252 1iy9_A Spermidine synthase; ro 98.6 1.4E-07 4.6E-12 97.0 10.7 97 219-321 76-189 (275)
253 3l8d_A Methyltransferase; stru 98.6 3.6E-08 1.2E-12 97.3 6.1 118 478-601 54-196 (242)
254 1zq9_A Probable dimethyladenos 98.6 8.2E-08 2.8E-12 99.1 9.0 109 202-318 14-144 (285)
255 1vlm_A SAM-dependent methyltra 98.6 1E-07 3.5E-12 93.4 9.2 90 478-580 48-139 (219)
256 1xxl_A YCGJ protein; structura 98.6 5E-08 1.7E-12 97.0 7.1 98 476-580 20-124 (239)
257 2pt6_A Spermidine synthase; tr 98.6 1.7E-07 5.7E-12 98.6 11.4 99 219-321 117-230 (321)
258 3g5l_A Putative S-adenosylmeth 98.6 5.8E-08 2E-12 96.9 7.5 106 467-580 35-145 (253)
259 2b2c_A Spermidine synthase; be 98.6 1.9E-07 6.5E-12 98.0 11.7 99 219-321 109-222 (314)
260 3bxo_A N,N-dimethyltransferase 98.6 7.1E-08 2.4E-12 94.8 7.9 117 457-580 22-141 (239)
261 2i62_A Nicotinamide N-methyltr 98.6 1.6E-07 5.3E-12 93.8 10.5 142 476-620 55-261 (265)
262 2o07_A Spermidine synthase; st 98.6 9.7E-08 3.3E-12 99.6 9.3 97 219-321 96-209 (304)
263 3f4k_A Putative methyltransfer 98.6 4.8E-08 1.6E-12 97.5 6.7 95 478-580 47-150 (257)
264 2o57_A Putative sarcosine dime 98.6 5.5E-08 1.9E-12 99.5 7.4 96 477-580 82-187 (297)
265 3hp7_A Hemolysin, putative; st 98.6 1.4E-07 4.7E-12 98.1 10.3 134 477-620 85-250 (291)
266 1sui_A Caffeoyl-COA O-methyltr 98.6 7.5E-08 2.6E-12 97.2 8.1 96 220-321 81-190 (247)
267 3dh0_A SAM dependent methyltra 98.6 6.9E-08 2.4E-12 93.9 7.6 134 477-620 37-193 (219)
268 4htf_A S-adenosylmethionine-de 98.6 6.3E-08 2.2E-12 98.6 7.6 107 467-581 60-174 (285)
269 1inl_A Spermidine synthase; be 98.6 2.9E-07 9.8E-12 95.6 12.5 97 219-321 91-205 (296)
270 2ex4_A Adrenal gland protein A 98.6 3.3E-08 1.1E-12 98.2 5.1 123 477-603 79-223 (241)
271 3ccf_A Cyclopropane-fatty-acyl 98.6 7.4E-08 2.5E-12 97.9 7.7 97 476-580 56-154 (279)
272 3grz_A L11 mtase, ribosomal pr 98.6 7E-08 2.4E-12 93.3 7.2 117 478-603 61-183 (205)
273 3hm2_A Precorrin-6Y C5,15-meth 98.6 1.8E-07 6.2E-12 87.6 9.8 116 476-600 24-148 (178)
274 2i7c_A Spermidine synthase; tr 98.6 1.4E-07 4.9E-12 97.2 9.8 99 218-322 78-193 (283)
275 4gek_A TRNA (CMO5U34)-methyltr 98.6 3.2E-08 1.1E-12 101.0 4.6 103 478-581 71-179 (261)
276 2yqz_A Hypothetical protein TT 98.6 1.3E-07 4.5E-12 94.3 8.8 95 477-579 39-140 (263)
277 3njr_A Precorrin-6Y methylase; 98.6 1.5E-07 5E-12 92.1 9.0 113 476-600 54-175 (204)
278 3bus_A REBM, methyltransferase 98.5 4.5E-08 1.5E-12 98.7 5.4 98 476-580 60-166 (273)
279 3m70_A Tellurite resistance pr 98.5 5.3E-08 1.8E-12 99.2 5.9 118 478-603 121-258 (286)
280 3gu3_A Methyltransferase; alph 98.5 1.1E-07 3.7E-12 97.3 8.2 99 476-582 21-128 (284)
281 2yxl_A PH0851 protein, 450AA l 98.5 3.3E-07 1.1E-11 100.6 12.5 110 208-322 251-390 (450)
282 3mgg_A Methyltransferase; NYSG 98.5 5.2E-08 1.8E-12 98.5 5.6 98 476-580 36-142 (276)
283 3lcc_A Putative methyl chlorid 98.5 3.1E-07 1.1E-11 90.6 11.1 121 479-603 68-205 (235)
284 3evz_A Methyltransferase; NYSG 98.5 1.8E-07 6.2E-12 91.9 9.2 138 478-619 56-219 (230)
285 3sm3_A SAM-dependent methyltra 98.5 1.3E-07 4.5E-12 92.3 8.1 100 478-580 31-141 (235)
286 3g5t_A Trans-aconitate 3-methy 98.5 9.7E-08 3.3E-12 98.1 7.3 95 476-578 35-147 (299)
287 1mjf_A Spermidine synthase; sp 98.5 1.8E-07 6.1E-12 96.3 9.0 96 219-321 76-193 (281)
288 1wzn_A SAM-dependent methyltra 98.5 1.2E-07 4E-12 94.4 7.3 114 460-580 25-145 (252)
289 1zx0_A Guanidinoacetate N-meth 98.5 5.1E-08 1.7E-12 96.8 4.6 103 477-581 60-171 (236)
290 3ege_A Putative methyltransfer 98.5 9.4E-08 3.2E-12 96.4 6.6 97 476-580 33-130 (261)
291 2aot_A HMT, histamine N-methyl 98.5 5.9E-08 2E-12 99.7 5.2 101 476-580 51-172 (292)
292 2b78_A Hypothetical protein SM 98.5 4.3E-07 1.5E-11 97.8 12.0 104 219-323 213-333 (385)
293 3bkw_A MLL3908 protein, S-aden 98.5 8.5E-08 2.9E-12 94.5 6.1 99 476-581 42-145 (243)
294 3dtn_A Putative methyltransfer 98.5 1.3E-07 4.3E-12 93.2 7.2 101 476-580 43-148 (234)
295 3c3y_A Pfomt, O-methyltransfer 98.5 2.2E-07 7.6E-12 92.9 9.1 92 220-321 72-181 (237)
296 1jsx_A Glucose-inhibited divis 98.5 2.1E-07 7.1E-12 89.8 8.6 129 478-620 66-205 (207)
297 3fpf_A Mtnas, putative unchara 98.5 1.2E-07 4E-12 98.8 7.2 132 476-619 121-263 (298)
298 3jwh_A HEN1; methyltransferase 98.5 2.6E-07 9.1E-12 90.0 9.3 104 478-583 30-144 (217)
299 3d2l_A SAM-dependent methyltra 98.5 3.2E-07 1.1E-11 90.4 9.9 95 479-579 35-136 (243)
300 2pxx_A Uncharacterized protein 98.5 5.5E-08 1.9E-12 93.7 4.3 135 478-619 43-197 (215)
301 3lec_A NADB-rossmann superfami 98.5 4.8E-07 1.6E-11 90.9 11.2 130 204-361 11-146 (230)
302 1pjz_A Thiopurine S-methyltran 98.5 1.5E-07 5.1E-12 91.8 7.4 121 478-603 23-174 (203)
303 2cmg_A Spermidine synthase; tr 98.5 3E-07 1E-11 94.0 9.8 90 219-321 73-171 (262)
304 3vc1_A Geranyl diphosphate 2-C 98.5 1.3E-07 4.4E-12 98.0 7.2 107 467-580 107-221 (312)
305 3cgg_A SAM-dependent methyltra 98.5 2.6E-07 9E-12 87.2 8.7 137 478-620 47-195 (195)
306 3g89_A Ribosomal RNA small sub 98.5 3.3E-07 1.1E-11 92.7 10.0 163 452-624 56-233 (249)
307 2gs9_A Hypothetical protein TT 98.5 2.2E-07 7.6E-12 89.9 8.1 96 477-581 36-133 (211)
308 4dmg_A Putative uncharacterize 98.5 8.9E-07 3.1E-11 95.7 13.7 101 219-322 215-327 (393)
309 3lpm_A Putative methyltransfer 98.5 4E-07 1.4E-11 91.9 10.1 122 477-600 49-196 (259)
310 2h1r_A Dimethyladenosine trans 98.5 2.5E-07 8.7E-12 96.1 8.7 87 202-296 28-119 (299)
311 3gnl_A Uncharacterized protein 98.5 6.1E-07 2.1E-11 90.9 11.2 129 205-361 12-146 (244)
312 3cc8_A Putative methyltransfer 98.5 1.3E-07 4.4E-12 91.9 6.1 97 477-580 32-130 (230)
313 1l3i_A Precorrin-6Y methyltran 98.5 1.8E-07 6.1E-12 88.1 6.9 115 477-601 33-156 (192)
314 2p35_A Trans-aconitate 2-methy 98.5 1.8E-07 6.2E-12 93.2 7.2 98 476-580 32-132 (259)
315 2kw5_A SLR1183 protein; struct 98.5 2.3E-07 8E-12 89.1 7.7 112 480-601 32-167 (202)
316 2avn_A Ubiquinone/menaquinone 98.5 2.1E-07 7.1E-12 93.7 7.5 96 478-581 55-153 (260)
317 1sqg_A SUN protein, FMU protei 98.5 8.2E-07 2.8E-11 96.7 12.7 113 207-322 237-375 (429)
318 2f8l_A Hypothetical protein LM 98.5 3.7E-07 1.3E-11 96.4 9.5 103 218-322 130-257 (344)
319 3opn_A Putative hemolysin; str 98.4 6.5E-07 2.2E-11 89.8 10.8 134 477-620 37-202 (232)
320 2a14_A Indolethylamine N-methy 98.4 2.8E-07 9.5E-12 93.4 7.5 103 476-580 54-197 (263)
321 3m6w_A RRNA methylase; rRNA me 98.4 3.1E-07 1E-11 101.3 8.2 108 208-322 93-230 (464)
322 1uwv_A 23S rRNA (uracil-5-)-me 98.4 1.2E-06 4.3E-11 95.5 12.9 128 185-322 253-390 (433)
323 4dzr_A Protein-(glutamine-N5) 98.4 1.7E-07 5.9E-12 90.0 5.4 141 477-620 30-205 (215)
324 3k6r_A Putative transferase PH 98.4 1.8E-06 6.2E-11 89.1 13.1 143 193-358 104-251 (278)
325 1wxx_A TT1595, hypothetical pr 98.4 7.1E-07 2.4E-11 95.7 10.4 103 219-322 210-326 (382)
326 2nxc_A L11 mtase, ribosomal pr 98.4 4E-07 1.4E-11 92.0 8.0 126 478-619 121-254 (254)
327 3kr9_A SAM-dependent methyltra 98.4 1.6E-06 5.3E-11 86.9 12.1 128 205-361 6-140 (225)
328 3c0k_A UPF0064 protein YCCW; P 98.4 1.8E-06 6.1E-11 92.9 13.3 103 219-323 221-341 (396)
329 3frh_A 16S rRNA methylase; met 98.4 7.3E-07 2.5E-11 90.1 9.5 101 217-320 104-205 (253)
330 2frx_A Hypothetical protein YE 98.4 7.7E-07 2.6E-11 98.6 10.4 112 208-322 107-247 (479)
331 1ve3_A Hypothetical protein PH 98.4 3.9E-07 1.3E-11 88.7 7.1 99 478-582 39-144 (227)
332 2g72_A Phenylethanolamine N-me 98.4 3E-07 1E-11 94.0 6.6 122 477-600 71-251 (289)
333 3lcv_B Sisomicin-gentamicin re 98.4 1.4E-06 4.7E-11 89.1 11.0 124 219-356 133-264 (281)
334 2p8j_A S-adenosylmethionine-de 98.4 3.2E-07 1.1E-11 88.3 6.1 97 478-580 24-128 (209)
335 2okc_A Type I restriction enzy 98.4 1E-06 3.5E-11 96.4 10.9 117 202-322 157-308 (445)
336 2gb4_A Thiopurine S-methyltran 98.4 2.6E-07 8.7E-12 93.8 5.6 121 478-603 69-225 (252)
337 3g2m_A PCZA361.24; SAM-depende 98.4 1.9E-07 6.4E-12 96.0 4.6 95 480-580 85-190 (299)
338 2as0_A Hypothetical protein PH 98.4 1.1E-06 3.7E-11 94.6 10.6 103 219-322 218-336 (396)
339 3r0q_C Probable protein argini 98.4 4.4E-07 1.5E-11 97.3 7.4 100 476-579 62-168 (376)
340 2vdw_A Vaccinia virus capping 98.3 1.9E-07 6.6E-12 97.2 4.1 103 478-582 49-171 (302)
341 1qam_A ERMC' methyltransferase 98.3 8.3E-07 2.9E-11 89.4 8.7 84 202-291 16-103 (244)
342 3m4x_A NOL1/NOP2/SUN family pr 98.3 1.4E-06 4.9E-11 95.8 11.2 112 208-322 97-235 (456)
343 2b3t_A Protein methyltransfera 98.3 6.5E-07 2.2E-11 91.2 7.9 136 478-619 110-275 (276)
344 3iv6_A Putative Zn-dependent a 98.3 4.1E-07 1.4E-11 93.1 6.3 121 476-601 44-173 (261)
345 3ggd_A SAM-dependent methyltra 98.3 2.4E-07 8.2E-12 91.9 4.2 99 478-580 57-163 (245)
346 2jjq_A Uncharacterized RNA met 98.3 3.8E-06 1.3E-10 91.7 13.7 96 219-322 291-388 (425)
347 4fsd_A Arsenic methyltransfera 98.3 2.4E-07 8.3E-12 99.3 4.2 99 477-580 83-203 (383)
348 2ih2_A Modification methylase 98.3 7.6E-07 2.6E-11 95.7 8.1 109 202-322 25-165 (421)
349 2yx1_A Hypothetical protein MJ 98.3 2.9E-06 9.9E-11 89.5 12.4 93 219-322 196-292 (336)
350 1nt2_A Fibrillarin-like PRE-rR 98.3 1.3E-06 4.5E-11 85.9 9.1 97 477-579 57-160 (210)
351 2fca_A TRNA (guanine-N(7)-)-me 98.3 8.9E-07 3.1E-11 87.0 7.7 118 478-600 39-174 (213)
352 3q87_B N6 adenine specific DNA 98.3 2E-06 6.8E-11 81.4 9.6 128 479-618 25-160 (170)
353 3g07_A 7SK snRNA methylphospha 98.3 9.6E-08 3.3E-12 98.5 0.4 102 477-580 46-220 (292)
354 3tfw_A Putative O-methyltransf 98.3 2.1E-06 7.3E-11 86.2 10.3 133 478-620 64-225 (248)
355 3v97_A Ribosomal RNA large sub 98.3 1.5E-06 5.2E-11 100.5 10.4 103 219-323 540-659 (703)
356 1yub_A Ermam, rRNA methyltrans 98.3 3.7E-08 1.3E-12 99.0 -2.8 111 204-321 17-145 (245)
357 3bkx_A SAM-dependent methyltra 98.3 1.2E-06 4.2E-11 88.1 8.3 110 464-580 31-159 (275)
358 2fyt_A Protein arginine N-meth 98.3 5.9E-07 2E-11 94.9 6.1 97 477-577 64-168 (340)
359 2frn_A Hypothetical protein PH 98.3 1.2E-06 4.2E-11 89.7 8.2 115 478-601 126-253 (278)
360 1ri5_A MRNA capping enzyme; me 98.3 3.5E-07 1.2E-11 92.9 3.9 101 478-582 65-176 (298)
361 1yzh_A TRNA (guanine-N(7)-)-me 98.3 1.9E-06 6.6E-11 84.0 8.9 122 478-601 42-178 (214)
362 3q7e_A Protein arginine N-meth 98.3 4.8E-07 1.6E-11 95.9 4.8 98 478-579 67-172 (349)
363 3duw_A OMT, O-methyltransferas 98.2 1.3E-06 4.3E-11 85.6 7.1 133 478-620 59-222 (223)
364 3dp7_A SAM-dependent methyltra 98.2 1.9E-06 6.6E-11 91.5 9.0 99 477-580 179-287 (363)
365 3m33_A Uncharacterized protein 98.2 3.9E-07 1.3E-11 89.8 3.2 110 478-599 49-161 (226)
366 3ntv_A MW1564 protein; rossman 98.2 2.9E-06 1E-10 84.2 9.5 130 478-620 72-231 (232)
367 2bm8_A Cephalosporin hydroxyla 98.2 9.6E-07 3.3E-11 88.4 5.9 112 479-600 83-214 (236)
368 3dxy_A TRNA (guanine-N(7)-)-me 98.2 8.5E-07 2.9E-11 87.8 5.4 116 477-594 34-165 (218)
369 3gru_A Dimethyladenosine trans 98.2 6E-06 2.1E-10 85.9 11.9 87 202-292 36-124 (295)
370 3b5i_A S-adenosyl-L-methionine 98.2 4.7E-06 1.6E-10 89.4 11.4 103 219-322 53-226 (374)
371 3tr6_A O-methyltransferase; ce 98.2 1.5E-06 5E-11 85.1 6.7 129 478-620 65-224 (225)
372 2esr_A Methyltransferase; stru 98.2 5.7E-07 2E-11 84.7 3.4 99 478-582 32-140 (177)
373 3ckk_A TRNA (guanine-N(7)-)-me 98.2 1.5E-06 5.2E-11 87.1 6.7 116 477-596 46-185 (235)
374 2ld4_A Anamorsin; methyltransf 98.2 1.7E-06 6E-11 81.5 6.7 131 476-626 11-174 (176)
375 2xyq_A Putative 2'-O-methyl tr 98.2 4.1E-06 1.4E-10 87.0 9.4 87 219-322 64-172 (290)
376 3bgv_A MRNA CAP guanine-N7 met 98.2 7.6E-07 2.6E-11 92.1 3.8 103 478-582 35-157 (313)
377 1g6q_1 HnRNP arginine N-methyl 98.2 3E-06 1E-10 88.9 8.4 97 478-578 39-143 (328)
378 3p9n_A Possible methyltransfer 98.2 1.2E-06 4.1E-11 83.7 4.7 123 451-581 22-154 (189)
379 3u81_A Catechol O-methyltransf 98.2 8.6E-07 3E-11 87.1 3.7 133 478-620 59-213 (221)
380 1qzz_A RDMB, aclacinomycin-10- 98.1 4.5E-06 1.5E-10 88.3 9.1 141 476-621 181-357 (374)
381 1ej0_A FTSJ; methyltransferase 98.1 5.3E-06 1.8E-10 76.5 8.1 130 478-619 23-177 (180)
382 2ift_A Putative methylase HI07 98.1 1.4E-06 4.7E-11 84.8 3.7 99 479-583 55-166 (201)
383 1yb2_A Hypothetical protein TA 98.1 4.5E-06 1.5E-10 85.0 7.7 111 476-599 109-231 (275)
384 1g8a_A Fibrillarin-like PRE-rR 98.1 1.1E-05 3.8E-10 79.1 10.3 132 477-620 73-227 (227)
385 3p2e_A 16S rRNA methylase; met 98.1 1.9E-06 6.6E-11 85.7 4.7 99 477-578 24-137 (225)
386 1ws6_A Methyltransferase; stru 98.1 7.6E-07 2.6E-11 82.6 1.5 97 478-582 42-149 (171)
387 2pwy_A TRNA (adenine-N(1)-)-me 98.1 1.1E-05 3.7E-10 80.3 9.9 110 477-599 96-218 (258)
388 3i53_A O-methyltransferase; CO 98.1 4.6E-06 1.6E-10 87.1 7.5 139 471-619 164-331 (332)
389 3c3p_A Methyltransferase; NP_9 98.1 6E-06 2E-10 80.1 7.8 94 478-580 57-160 (210)
390 2ip2_A Probable phenazine-spec 98.1 5.1E-06 1.7E-10 86.6 7.8 104 468-580 160-272 (334)
391 3mcz_A O-methyltransferase; ad 98.1 8.5E-06 2.9E-10 85.5 9.4 143 467-620 169-349 (352)
392 3lbf_A Protein-L-isoaspartate 98.1 1.9E-06 6.7E-11 83.3 3.9 94 476-582 76-176 (210)
393 2r3s_A Uncharacterized protein 98.1 5.6E-06 1.9E-10 86.0 7.7 137 477-620 165-335 (335)
394 2ozv_A Hypothetical protein AT 98.0 1.6E-05 5.6E-10 80.5 10.6 122 477-600 36-189 (260)
395 2vdv_E TRNA (guanine-N(7)-)-me 98.0 2.7E-06 9.1E-11 85.1 4.7 117 478-597 50-191 (246)
396 2fhp_A Methylase, putative; al 98.0 2.3E-06 7.7E-11 80.7 3.8 99 478-582 45-156 (187)
397 3bt7_A TRNA (uracil-5-)-methyl 98.0 1.7E-05 5.7E-10 84.7 10.9 107 203-321 201-326 (369)
398 3id6_C Fibrillarin-like rRNA/T 98.0 9.6E-06 3.3E-10 81.5 8.5 95 476-579 75-180 (232)
399 1o9g_A RRNA methyltransferase; 98.0 3.8E-06 1.3E-10 84.0 5.5 106 477-582 51-216 (250)
400 1vbf_A 231AA long hypothetical 98.0 2.3E-06 7.8E-11 84.0 3.8 93 477-582 70-167 (231)
401 2oxt_A Nucleoside-2'-O-methylt 98.0 2E-06 7E-11 88.0 3.6 134 478-619 75-227 (265)
402 2plw_A Ribosomal RNA methyltra 98.0 1.1E-05 3.7E-10 77.3 8.4 132 478-619 23-195 (201)
403 1fbn_A MJ fibrillarin homologu 98.0 5.6E-06 1.9E-10 81.8 6.6 96 477-579 74-177 (230)
404 3mb5_A SAM-dependent methyltra 98.0 5.6E-06 1.9E-10 82.6 6.6 107 476-596 92-211 (255)
405 2ipx_A RRNA 2'-O-methyltransfe 98.0 1.2E-05 4.1E-10 79.4 8.8 134 477-619 77-231 (233)
406 3gwz_A MMCR; methyltransferase 98.0 1.9E-05 6.4E-10 84.0 10.9 140 472-619 198-368 (369)
407 2y1w_A Histone-arginine methyl 98.0 6.7E-06 2.3E-10 87.0 7.3 96 477-579 50-154 (348)
408 2gpy_A O-methyltransferase; st 98.0 2.4E-06 8.1E-11 84.4 3.6 95 478-580 55-160 (233)
409 3evf_A RNA-directed RNA polyme 98.0 2.5E-05 8.5E-10 80.1 11.1 115 203-322 61-185 (277)
410 3dou_A Ribosomal RNA large sub 98.0 5.5E-06 1.9E-10 80.3 5.6 134 478-620 26-181 (191)
411 1p91_A Ribosomal RNA large sub 98.0 2.5E-06 8.5E-11 85.9 3.2 90 477-581 85-179 (269)
412 2avd_A Catechol-O-methyltransf 98.0 9.5E-06 3.2E-10 79.5 7.2 129 478-620 70-229 (229)
413 3tqs_A Ribosomal RNA small sub 98.0 1.4E-05 4.7E-10 81.4 8.4 83 202-290 15-104 (255)
414 3k0b_A Predicted N6-adenine-sp 98.0 3.2E-05 1.1E-09 83.5 11.7 116 203-322 188-351 (393)
415 2ar0_A M.ecoki, type I restric 98.0 1E-05 3.6E-10 90.8 8.0 118 202-322 155-313 (541)
416 1mjf_A Spermidine synthase; sp 97.9 1E-05 3.6E-10 83.0 7.2 139 478-620 76-239 (281)
417 1tw3_A COMT, carminomycin 4-O- 97.9 7.6E-06 2.6E-10 86.2 6.4 138 476-620 182-356 (360)
418 2pjd_A Ribosomal RNA small sub 97.9 6.9E-06 2.4E-10 86.6 6.0 132 478-620 197-337 (343)
419 3htx_A HEN1; HEN1, small RNA m 97.9 1.7E-05 6E-10 92.1 9.6 101 478-580 722-834 (950)
420 3lst_A CALO1 methyltransferase 97.9 8.5E-06 2.9E-10 85.8 6.6 105 469-580 177-286 (348)
421 2efj_A 3,7-dimethylxanthine me 97.9 2.1E-05 7.1E-10 84.7 9.6 103 219-322 53-226 (384)
422 3ldu_A Putative methylase; str 97.9 2.7E-05 9.2E-10 83.8 10.4 116 203-322 182-345 (385)
423 3r3h_A O-methyltransferase, SA 97.9 1.7E-05 5.9E-10 79.5 8.2 130 478-620 61-220 (242)
424 2yvl_A TRMI protein, hypotheti 97.9 1.3E-05 4.4E-10 79.2 7.2 106 478-598 92-208 (248)
425 3mq2_A 16S rRNA methyltransfer 97.9 7.3E-06 2.5E-10 79.8 5.3 119 477-601 27-180 (218)
426 2qe6_A Uncharacterized protein 97.9 1.6E-05 5.6E-10 81.3 8.1 102 477-581 77-197 (274)
427 3sso_A Methyltransferase; macr 97.9 1E-06 3.4E-11 95.3 -1.0 126 462-599 203-361 (419)
428 3ldg_A Putative uncharacterize 97.9 6.6E-05 2.3E-09 80.8 13.1 116 203-322 181-344 (384)
429 2p41_A Type II methyltransfera 97.9 8.4E-06 2.9E-10 85.0 5.5 96 478-579 83-190 (305)
430 1nv8_A HEMK protein; class I a 97.9 8.2E-06 2.8E-10 84.0 5.3 131 478-620 124-282 (284)
431 2qfm_A Spermine synthase; sper 97.9 2.5E-05 8.6E-10 83.3 9.2 99 218-321 188-314 (364)
432 3cbg_A O-methyltransferase; cy 97.9 1.3E-05 4.4E-10 79.6 6.4 130 478-620 73-232 (232)
433 1x19_A CRTF-related protein; m 97.9 1.3E-05 4.6E-10 84.5 6.9 102 472-580 186-295 (359)
434 3fut_A Dimethyladenosine trans 97.9 2.4E-05 8.2E-10 80.4 8.4 85 202-292 33-120 (271)
435 2hnk_A SAM-dependent O-methylt 97.9 1.3E-05 4.5E-10 79.5 6.3 130 478-621 61-232 (239)
436 2fpo_A Methylase YHHF; structu 97.9 6.8E-06 2.3E-10 79.9 4.0 99 478-582 55-162 (202)
437 3gdh_A Trimethylguanosine synt 97.9 4.7E-07 1.6E-11 89.7 -4.5 95 478-580 79-181 (241)
438 2wa2_A Non-structural protein 97.9 5.9E-06 2E-10 85.0 3.6 95 478-579 83-192 (276)
439 1iy9_A Spermidine synthase; ro 97.9 3.5E-05 1.2E-09 78.9 9.4 143 477-621 75-237 (275)
440 3dr5_A Putative O-methyltransf 97.9 3.5E-05 1.2E-09 76.3 9.0 129 478-621 57-214 (221)
441 2b25_A Hypothetical protein; s 97.8 1.5E-05 5.1E-10 83.5 6.2 112 478-598 106-240 (336)
442 1o54_A SAM-dependent O-methylt 97.8 2.7E-05 9.3E-10 79.1 7.9 109 478-599 113-233 (277)
443 2dul_A N(2),N(2)-dimethylguano 97.8 3.8E-05 1.3E-09 82.5 9.4 97 219-321 48-164 (378)
444 3bwc_A Spermidine synthase; SA 97.8 2.4E-05 8.4E-10 81.2 7.7 142 477-620 95-258 (304)
445 2igt_A SAM dependent methyltra 97.8 1.2E-05 4E-10 84.9 5.2 120 478-600 154-299 (332)
446 1inl_A Spermidine synthase; be 97.8 2.6E-05 9.1E-10 80.7 7.6 142 478-621 91-253 (296)
447 1i1n_A Protein-L-isoaspartate 97.8 4.7E-06 1.6E-10 81.6 1.6 93 478-581 78-183 (226)
448 2pt6_A Spermidine synthase; tr 97.8 3.2E-05 1.1E-09 81.1 8.1 143 478-622 117-279 (321)
449 1sui_A Caffeoyl-COA O-methyltr 97.8 2.3E-05 7.7E-10 78.9 6.6 95 478-580 80-190 (247)
450 1xj5_A Spermidine synthase 1; 97.8 2.5E-05 8.6E-10 82.5 7.0 101 477-579 120-234 (334)
451 2b9e_A NOL1/NOP2/SUN domain fa 97.8 0.00011 3.9E-09 76.7 11.8 110 209-322 95-235 (309)
452 3adn_A Spermidine synthase; am 97.8 6E-05 2.1E-09 78.1 9.6 143 477-621 83-246 (294)
453 2b2c_A Spermidine synthase; be 97.8 3.2E-05 1.1E-09 81.0 7.4 140 478-620 109-269 (314)
454 3fzg_A 16S rRNA methylase; met 97.8 1.1E-05 3.9E-10 78.8 3.6 142 465-619 40-197 (200)
455 1ixk_A Methyltransferase; open 97.7 1.9E-05 6.6E-10 82.4 5.3 119 478-598 119-268 (315)
456 4df3_A Fibrillarin-like rRNA/T 97.7 3.6E-05 1.2E-09 77.4 7.0 94 476-580 76-182 (233)
457 2yxe_A Protein-L-isoaspartate 97.7 1.5E-05 5E-10 77.3 4.0 95 477-582 77-179 (215)
458 2nyu_A Putative ribosomal RNA 97.7 6.5E-05 2.2E-09 71.4 8.2 98 478-580 23-145 (196)
459 1dl5_A Protein-L-isoaspartate 97.7 1.1E-05 3.7E-10 84.1 2.6 95 477-581 75-176 (317)
460 1wy7_A Hypothetical protein PH 97.7 0.0002 6.8E-09 68.8 11.4 117 477-601 49-171 (207)
461 1i9g_A Hypothetical protein RV 97.7 4.7E-05 1.6E-09 76.9 7.1 108 478-597 100-222 (280)
462 1fp1_D Isoliquiritigenin 2'-O- 97.7 1.6E-05 5.5E-10 84.5 3.6 97 476-580 208-306 (372)
463 3reo_A (ISO)eugenol O-methyltr 97.7 4E-05 1.4E-09 81.6 6.5 97 476-580 202-300 (368)
464 3c3y_A Pfomt, O-methyltransfer 97.7 4.1E-05 1.4E-09 76.3 6.1 95 478-580 71-181 (237)
465 2i7c_A Spermidine synthase; tr 97.7 0.00011 3.6E-09 75.6 9.4 142 477-620 78-239 (283)
466 1m6e_X S-adenosyl-L-methionnin 97.7 3.8E-05 1.3E-09 81.9 6.2 103 219-322 52-210 (359)
467 3ftd_A Dimethyladenosine trans 97.7 0.00019 6.3E-09 72.6 10.9 84 202-290 17-103 (249)
468 3uzu_A Ribosomal RNA small sub 97.7 5E-05 1.7E-09 78.3 6.6 82 202-290 28-122 (279)
469 1jg1_A PIMT;, protein-L-isoasp 97.6 1.3E-05 4.5E-10 79.3 2.1 92 477-581 91-190 (235)
470 3uwp_A Histone-lysine N-methyl 97.6 2.8E-05 9.5E-10 84.4 4.7 97 476-581 172-289 (438)
471 3b3j_A Histone-arginine methyl 97.6 2E-05 6.7E-10 87.3 3.4 96 477-578 158-261 (480)
472 3bzb_A Uncharacterized protein 97.6 4.2E-05 1.5E-09 78.3 5.7 96 478-578 80-203 (281)
473 3c0k_A UPF0064 protein YCCW; P 97.6 5.6E-05 1.9E-09 81.2 6.5 121 478-600 221-365 (396)
474 1ne2_A Hypothetical protein TA 97.6 0.00012 4.1E-09 70.2 8.2 111 477-596 51-162 (200)
475 3a27_A TYW2, uncharacterized p 97.6 3.9E-05 1.4E-09 78.3 4.9 113 478-600 120-246 (272)
476 4gqb_A Protein arginine N-meth 97.6 0.00021 7.3E-09 81.4 11.1 97 219-318 358-464 (637)
477 3tma_A Methyltransferase; thum 97.6 0.00012 4.1E-09 77.3 8.3 140 476-619 202-353 (354)
478 4hc4_A Protein arginine N-meth 97.6 6E-05 2.1E-09 80.9 6.1 99 478-579 84-188 (376)
479 1fp2_A Isoflavone O-methyltran 97.6 2.2E-05 7.5E-10 82.7 2.6 95 477-580 188-288 (352)
480 3khk_A Type I restriction-modi 97.6 0.00019 6.7E-09 80.6 10.2 115 202-322 231-396 (544)
481 2o07_A Spermidine synthase; st 97.6 9.1E-05 3.1E-09 77.1 6.9 142 477-620 95-256 (304)
482 1uir_A Polyamine aminopropyltr 97.5 7.5E-05 2.6E-09 77.9 6.2 141 478-621 78-243 (314)
483 1u2z_A Histone-lysine N-methyl 97.5 4.5E-05 1.6E-09 83.3 4.7 100 476-581 241-360 (433)
484 1af7_A Chemotaxis receptor met 97.5 4E-05 1.4E-09 78.8 3.9 120 451-581 86-253 (274)
485 4auk_A Ribosomal RNA large sub 97.5 0.0029 1E-07 67.5 18.1 119 218-356 211-332 (375)
486 3axs_A Probable N(2),N(2)-dime 97.5 0.00016 5.5E-09 78.0 8.4 96 219-321 53-158 (392)
487 3gjy_A Spermidine synthase; AP 97.5 0.00014 4.7E-09 76.4 7.6 142 478-622 90-249 (317)
488 2pbf_A Protein-L-isoaspartate 97.5 4.9E-05 1.7E-09 74.3 3.8 93 478-581 81-194 (227)
489 1wxx_A TT1595, hypothetical pr 97.5 7E-05 2.4E-09 80.2 5.4 122 478-602 210-353 (382)
490 3p9c_A Caffeic acid O-methyltr 97.5 7.8E-05 2.7E-09 79.3 5.7 97 476-580 200-298 (364)
491 3lkd_A Type I restriction-modi 97.5 0.00038 1.3E-08 78.2 11.3 120 202-322 203-359 (542)
492 2cmg_A Spermidine synthase; tr 97.5 0.0005 1.7E-08 70.0 11.2 130 477-621 72-217 (262)
493 2r6z_A UPF0341 protein in RSP 97.5 5.2E-05 1.8E-09 77.1 3.9 85 208-294 75-173 (258)
494 3ajd_A Putative methyltransfer 97.5 5.7E-05 1.9E-09 77.0 3.7 99 478-579 84-210 (274)
495 1r18_A Protein-L-isoaspartate( 97.5 4.6E-05 1.6E-09 74.8 3.0 92 478-581 85-195 (227)
496 4dmg_A Putative uncharacterize 97.4 0.0001 3.5E-09 79.6 5.6 121 478-601 215-353 (393)
497 2h00_A Methyltransferase 10 do 97.4 2.7E-05 9.1E-10 77.8 0.3 102 477-579 65-191 (254)
498 1qyr_A KSGA, high level kasuga 97.3 0.00039 1.3E-08 70.5 8.4 82 203-292 8-100 (252)
499 2f8l_A Hypothetical protein LM 97.3 0.00015 5.3E-09 76.2 5.6 143 476-620 129-305 (344)
500 2oyr_A UPF0341 protein YHIQ; a 97.3 9.5E-05 3.2E-09 75.4 3.9 106 207-315 77-194 (258)
No 1
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.56 E-value=1.6e-14 Score=139.90 Aligned_cols=137 Identities=12% Similarity=0.012 Sum_probs=105.9
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccCCcC
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQY 298 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~~ 298 (637)
+.+|||+|||+|.++..|++++..++.+ |+++.+++.++++...+.+...+...+++++++||+|++..+++|+..+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 118 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGL---EPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPG 118 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEE---CCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTT
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEE---eCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHH
Confidence 3489999999999999999986655565 6677888888888778899999999999999999999999999998755
Q ss_pred CHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHhceeeec
Q 006633 299 ADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 360 (637)
Q Consensus 299 d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w~~v~ 360 (637)
+...+++++.++|||||.+++..+............. .......+.+..+++..+|+.+.
T Consensus 119 ~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~Gf~~~~ 178 (203)
T 3h2b_A 119 ELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVA--TAYRWPLPELAQALETAGFQVTS 178 (203)
T ss_dssp THHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSS--CEEECCHHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhh--hhccCCHHHHHHHHHHCCCcEEE
Confidence 8999999999999999999999754332221111000 00111234577888888997765
No 2
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.55 E-value=1.1e-14 Score=148.85 Aligned_cols=110 Identities=23% Similarity=0.274 Sum_probs=91.1
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSR 281 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~ 281 (637)
.+.++.|.+..+ ...+|||||||+|.++..|++++..++++ |+++.|++.|++ ..++.+.+++++.+|++++
T Consensus 27 ~~l~~~l~~~~~----~~~~vLDvGcGtG~~~~~l~~~~~~v~gv---D~s~~ml~~a~~-~~~v~~~~~~~e~~~~~~~ 98 (257)
T 4hg2_A 27 RALFRWLGEVAP----ARGDALDCGCGSGQASLGLAEFFERVHAV---DPGEAQIRQALR-HPRVTYAVAPAEDTGLPPA 98 (257)
T ss_dssp HHHHHHHHHHSS----CSSEEEEESCTTTTTHHHHHTTCSEEEEE---ESCHHHHHTCCC-CTTEEEEECCTTCCCCCSS
T ss_pred HHHHHHHHHhcC----CCCCEEEEcCCCCHHHHHHHHhCCEEEEE---eCcHHhhhhhhh-cCCceeehhhhhhhcccCC
Confidence 445566665543 23489999999999999999987666666 667788877754 4578999999999999999
Q ss_pred CeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 282 AFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 282 sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+||+|+|..++ ||. +...++.|+.|+|||||.|++...
T Consensus 99 sfD~v~~~~~~-h~~--~~~~~~~e~~rvLkpgG~l~~~~~ 136 (257)
T 4hg2_A 99 SVDVAIAAQAM-HWF--DLDRFWAELRRVARPGAVFAAVTY 136 (257)
T ss_dssp CEEEEEECSCC-TTC--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccEEEEeeeh-hHh--hHHHHHHHHHHHcCCCCEEEEEEC
Confidence 99999999999 777 688999999999999999999864
No 3
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.51 E-value=2.4e-14 Score=140.30 Aligned_cols=99 Identities=12% Similarity=0.021 Sum_probs=81.3
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc-----------------CCCeEEEEeccccCCCCC-
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER-----------------GVPALIGVMASIRLPYPS- 280 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er-----------------g~~~~~~~~d~~~Lpfpd- 280 (637)
+.+|||+|||+|..+..|++++..++++ |+++.+++.|+++ ..++.+.++|...+++++
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~g~~V~gv---D~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQGYHVVGA---ELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHHCCEEEEE---EECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCEEEEeCCCCcHhHHHHHHCCCeEEEE---eCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 3499999999999999999987666666 6777777777654 246789999999998875
Q ss_pred CCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEE
Q 006633 281 RAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILS 320 (637)
Q Consensus 281 ~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls 320 (637)
++||+|++..+++|++.++...+++++.|+|||||++++.
T Consensus 100 ~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~ 139 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI 139 (203)
T ss_dssp HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 8999999999998887535667999999999999985444
No 4
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.50 E-value=2.1e-13 Score=133.36 Aligned_cols=154 Identities=17% Similarity=0.138 Sum_probs=104.7
Q ss_pred HHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHc----C-CCeEEEEeccccCCC
Q 006633 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALER----G-VPALIGVMASIRLPY 278 (637)
Q Consensus 207 ~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~er----g-~~~~~~~~d~~~Lpf 278 (637)
.+.+.+...++ .+|||+|||+|.++..+++.. ..++.+ |+++.+++.++++ + .++.+...+...+++
T Consensus 28 ~~~~~~~~~~~--~~vLDiG~G~G~~~~~l~~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~ 102 (219)
T 3dh0_A 28 KVLKEFGLKEG--MTVLDVGTGAGFYLPYLSKMVGEKGKVYAI---DVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPL 102 (219)
T ss_dssp HHHHHHTCCTT--CEEEESSCTTCTTHHHHHHHHTTTCEEEEE---ESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSS
T ss_pred HHHHHhCCCCC--CEEEEEecCCCHHHHHHHHHhCCCcEEEEE---ECCHHHHHHHHHHHHHcCCCcEEEEecccccCCC
Confidence 44455554444 499999999999999998763 333333 3344444444332 3 358899999999999
Q ss_pred CCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHhceee
Q 006633 279 PSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKK 358 (637)
Q Consensus 279 pd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w~~ 358 (637)
++++||+|+++.+++|+. +...+++++.|+|||||.+++..+....... ..........+.+..+.++.+|+.
T Consensus 103 ~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~Gf~~ 175 (219)
T 3dh0_A 103 PDNTVDFIFMAFTFHELS--EPLKFLEELKRVAKPFAYLAIIDWKKEERDK-----GPPPEEVYSEWEVGLILEDAGIRV 175 (219)
T ss_dssp CSSCEEEEEEESCGGGCS--SHHHHHHHHHHHEEEEEEEEEEEECSSCCSS-----SCCGGGSCCHHHHHHHHHHTTCEE
T ss_pred CCCCeeEEEeehhhhhcC--CHHHHHHHHHHHhCCCeEEEEEEeccccccc-----CCchhcccCHHHHHHHHHHCCCEE
Confidence 999999999999998886 7999999999999999999998642221110 011111122356778888889986
Q ss_pred ecccC-----cEEEEeccC
Q 006633 359 LIQKK-----DLAIWQKPT 372 (637)
Q Consensus 359 v~~~~-----~~aIWqKP~ 372 (637)
+.... ...+.+|+.
T Consensus 176 ~~~~~~~~~~~~~~~~k~~ 194 (219)
T 3dh0_A 176 GRVVEVGKYCFGVYAMIVK 194 (219)
T ss_dssp EEEEEETTTEEEEEEECC-
T ss_pred EEEEeeCCceEEEEEEecc
Confidence 65311 245666664
No 5
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.50 E-value=1.5e-13 Score=136.25 Aligned_cols=149 Identities=19% Similarity=0.133 Sum_probs=108.0
Q ss_pred HHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc--CCCeEEEEeccccCCCCCC
Q 006633 204 YIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER--GVPALIGVMASIRLPYPSR 281 (637)
Q Consensus 204 ~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er--g~~~~~~~~d~~~Lpfpd~ 281 (637)
.++.+.+.++ + +.+|||||||+|.++..|++++..++.+ |+++.+++.++++ ..++.+...+...++++++
T Consensus 43 ~~~~l~~~~~--~--~~~vLDiG~G~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~ 115 (242)
T 3l8d_A 43 IIPFFEQYVK--K--EAEVLDVGCGDGYGTYKLSRTGYKAVGV---DISEVMIQKGKERGEGPDLSFIKGDLSSLPFENE 115 (242)
T ss_dssp HHHHHHHHSC--T--TCEEEEETCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTT
T ss_pred HHHHHHHHcC--C--CCeEEEEcCCCCHHHHHHHHcCCeEEEE---ECCHHHHHHHHhhcccCCceEEEcchhcCCCCCC
Confidence 3444555443 3 3499999999999999999997666666 6677888888776 3568899999999999999
Q ss_pred CeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCC----chhhhHHhHhhHHHHHHHhcee
Q 006633 282 AFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNR----TTEDLKSEQNGIETIARSLCWK 357 (637)
Q Consensus 282 sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~----t~e~l~~~~~~ie~la~~l~w~ 357 (637)
+||+|++..+++|+. +...++.++.++|||||++++..+..........|.. ...........++.+++..+|+
T Consensus 116 ~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~ 193 (242)
T 3l8d_A 116 QFEAIMAINSLEWTE--EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFK 193 (242)
T ss_dssp CEEEEEEESCTTSSS--CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEE
T ss_pred CccEEEEcChHhhcc--CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCE
Confidence 999999999998886 8999999999999999999998743221111110000 0000001124577888899998
Q ss_pred eecc
Q 006633 358 KLIQ 361 (637)
Q Consensus 358 ~v~~ 361 (637)
.+..
T Consensus 194 ~~~~ 197 (242)
T 3l8d_A 194 VVDG 197 (242)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7753
No 6
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.50 E-value=3.5e-14 Score=141.62 Aligned_cols=152 Identities=13% Similarity=0.152 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccC--CC
Q 006633 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRL--PY 278 (637)
Q Consensus 201 ~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~L--pf 278 (637)
.+...+.+...++... .+.+|||||||+|.++..|++++..++++ |+++.+++.+.++ +.+...+...+ ++
T Consensus 25 ~~~~~~~~~~~l~~~~-~~~~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~---~~~~~~d~~~~~~~~ 97 (240)
T 3dli_A 25 RELVKARLRRYIPYFK-GCRRVLDIGCGRGEFLELCKEEGIESIGV---DINEDMIKFCEGK---FNVVKSDAIEYLKSL 97 (240)
T ss_dssp HHHHHHHHGGGGGGTT-TCSCEEEETCTTTHHHHHHHHHTCCEEEE---CSCHHHHHHHHTT---SEEECSCHHHHHHTS
T ss_pred HHHHHHHHHHHHhhhc-CCCeEEEEeCCCCHHHHHHHhCCCcEEEE---ECCHHHHHHHHhh---cceeeccHHHHhhhc
Confidence 4445555555554222 23589999999999999999887666666 6778888888776 66777777665 88
Q ss_pred CCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccC-CCCchhhhHHhHhhHHHHHHHhcee
Q 006633 279 PSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKG-WNRTTEDLKSEQNGIETIARSLCWK 357 (637)
Q Consensus 279 pd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~-w~~t~e~l~~~~~~ie~la~~l~w~ 357 (637)
++++||+|++..+++|+..++...+++++.|+|||||++++..+.......... |...........+.+..+.++.+|+
T Consensus 98 ~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~ 177 (240)
T 3dli_A 98 PDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFR 177 (240)
T ss_dssp CTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCE
T ss_pred CCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCe
Confidence 899999999999999988545689999999999999999999874332111000 0000111111124567777788887
Q ss_pred ee
Q 006633 358 KL 359 (637)
Q Consensus 358 ~v 359 (637)
.+
T Consensus 178 ~~ 179 (240)
T 3dli_A 178 DV 179 (240)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 7
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.50 E-value=8.3e-14 Score=140.37 Aligned_cols=110 Identities=18% Similarity=0.258 Sum_probs=86.2
Q ss_pred HHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc----C-CCeEEEEeccccCCCCC
Q 006633 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----G-VPALIGVMASIRLPYPS 280 (637)
Q Consensus 206 ~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er----g-~~~~~~~~d~~~Lpfpd 280 (637)
+.+.+.+...++ .+|||||||+|.++..|++++..++.+ |+++.+++.|+++ + .++.+..+|...+|+++
T Consensus 27 ~~l~~~l~~~~~--~~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~ 101 (260)
T 1vl5_A 27 AKLMQIAALKGN--EEVLDVATGGGHVANAFAPFVKKVVAF---DLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTD 101 (260)
T ss_dssp HHHHHHHTCCSC--CEEEEETCTTCHHHHHHGGGSSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCT
T ss_pred HHHHHHhCCCCC--CEEEEEeCCCCHHHHHHHHhCCEEEEE---eCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCC
Confidence 445556555443 499999999999999999885444444 4455555555433 3 35888999999999999
Q ss_pred CCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 281 RAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 281 ~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++||+|+++.+++|+. +...+|.++.|+|||||+|++..+
T Consensus 102 ~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~~~~~ 141 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFP--NPASFVSEAYRVLKKGGQLLLVDN 141 (260)
T ss_dssp TCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCEEEEEEhhhhHhcC--CHHHHHHHHHHHcCCCCEEEEEEc
Confidence 9999999999998887 899999999999999999999753
No 8
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.50 E-value=2.7e-14 Score=142.69 Aligned_cols=148 Identities=9% Similarity=0.060 Sum_probs=101.5
Q ss_pred HHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHcC---CCeEEEEeccccCC
Q 006633 204 YIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALERG---VPALIGVMASIRLP 277 (637)
Q Consensus 204 ~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~erg---~~~~~~~~d~~~Lp 277 (637)
++..+.+.+...+ ..+|||||||+|.++..|++++ ++++ |+++.+++.++++. ..+.+...+...++
T Consensus 81 ~~~~~l~~l~~~~--~~~vLDiG~G~G~~~~~l~~~~~~~v~~v-----D~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~ 153 (254)
T 1xtp_A 81 GSRNFIASLPGHG--TSRALDCGAGIGRITKNLLTKLYATTDLL-----EPVKHMLEEAKRELAGMPVGKFILASMETAT 153 (254)
T ss_dssp HHHHHHHTSTTCC--CSEEEEETCTTTHHHHHTHHHHCSEEEEE-----ESCHHHHHHHHHHTTTSSEEEEEESCGGGCC
T ss_pred HHHHHHHhhcccC--CCEEEEECCCcCHHHHHHHHhhcCEEEEE-----eCCHHHHHHHHHHhccCCceEEEEccHHHCC
Confidence 3444444443333 4599999999999999988773 4455 44566677776654 35788888998999
Q ss_pred CCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHhcee
Q 006633 278 YPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWK 357 (637)
Q Consensus 278 fpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w~ 357 (637)
+++++||+|++..+++|+..++...++.++.|+|||||++++..+.......... ..........+.+..++++.+|+
T Consensus 154 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~aGf~ 231 (254)
T 1xtp_A 154 LPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVD--KEDSSLTRSDIHYKRLFNESGVR 231 (254)
T ss_dssp CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEE--TTTTEEEBCHHHHHHHHHHHTCC
T ss_pred CCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceec--ccCCcccCCHHHHHHHHHHCCCE
Confidence 9999999999999998886436889999999999999999998752211111000 00011111234577788888887
Q ss_pred eec
Q 006633 358 KLI 360 (637)
Q Consensus 358 ~v~ 360 (637)
.+.
T Consensus 232 ~~~ 234 (254)
T 1xtp_A 232 VVK 234 (254)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 9
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.49 E-value=1.1e-13 Score=138.87 Aligned_cols=118 Identities=16% Similarity=0.243 Sum_probs=96.5
Q ss_pred cHHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc-CCEEEEcCccccHHHHHHHHHHcC---CCeEEEEecccc
Q 006633 200 GADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALERG---VPALIGVMASIR 275 (637)
Q Consensus 200 g~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-~v~~vdisp~Dls~a~i~~A~erg---~~~~~~~~d~~~ 275 (637)
+.....+.+.+.++..++ .+|||||||+|.++..|+++ +..++.+ |+++.+++.++++. ..+.+...|...
T Consensus 39 ~~~~~~~~~~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~d~~~ 113 (266)
T 3ujc_A 39 GGLEATKKILSDIELNEN--SKVLDIGSGLGGGCMYINEKYGAHTHGI---DICSNIVNMANERVSGNNKIIFEANDILT 113 (266)
T ss_dssp THHHHHHHHTTTCCCCTT--CEEEEETCTTSHHHHHHHHHHCCEEEEE---ESCHHHHHHHHHTCCSCTTEEEEECCTTT
T ss_pred chHHHHHHHHHhcCCCCC--CEEEEECCCCCHHHHHHHHHcCCEEEEE---eCCHHHHHHHHHHhhcCCCeEEEECcccc
Confidence 344455566666654444 49999999999999999987 6666666 66778888888775 468899999999
Q ss_pred CCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 276 LPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 276 Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+|+++++||+|++..+++|+...+...++.++.|+|||||.+++..+
T Consensus 114 ~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 114 KEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp CCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 99999999999999999888433899999999999999999999875
No 10
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.49 E-value=3.1e-13 Score=132.46 Aligned_cols=115 Identities=11% Similarity=0.102 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC--CEEEEcCccccHHHHHHHHHHcC----C------CeEE
Q 006633 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALERG----V------PALI 268 (637)
Q Consensus 201 ~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~--v~~vdisp~Dls~a~i~~A~erg----~------~~~~ 268 (637)
.....+.+.+.+...++ .+|||||||+|.++..|++++ ..++.+ |+++.+++.|+++. . .+.+
T Consensus 14 ~~~~~~~l~~~l~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~~~~v~~ 88 (219)
T 3jwg_A 14 NQQRLGTVVAVLKSVNA--KKVIDLGCGEGNLLSLLLKDKSFEQITGV---DVSYSVLERAKDRLKIDRLPEMQRKRISL 88 (219)
T ss_dssp HHHHHHHHHHHHHHTTC--CEEEEETCTTCHHHHHHHTSTTCCEEEEE---ESCHHHHHHHHHHHTGGGSCHHHHTTEEE
T ss_pred hHHHHHHHHHHHhhcCC--CEEEEecCCCCHHHHHHHhcCCCCEEEEE---ECCHHHHHHHHHHHHhhccccccCcceEE
Confidence 34445566666654443 499999999999999999874 344444 55556666665442 1 6788
Q ss_pred EEeccccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEE
Q 006633 269 GVMASIRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILS 320 (637)
Q Consensus 269 ~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls 320 (637)
...|...+++++++||+|+|..+++|+.+++...+++++.++|||||.++.+
T Consensus 89 ~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~ 140 (219)
T 3jwg_A 89 FQSSLVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST 140 (219)
T ss_dssp EECCSSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred EeCcccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence 8888888888889999999999998887423378999999999999966555
No 11
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.48 E-value=1.3e-13 Score=141.61 Aligned_cols=116 Identities=15% Similarity=0.212 Sum_probs=91.0
Q ss_pred cHHHHHHHHHHHh----cccCCCCCEEEEECCCCchHHHHHhhc-CCEEEEcCccccHHHHHHHHHHc----C--CCeEE
Q 006633 200 GADAYIDDIGKLI----NLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALER----G--VPALI 268 (637)
Q Consensus 200 g~~~~i~~L~~lL----~~~~g~~r~VLDIGCGtG~~a~~La~~-~v~~vdisp~Dls~a~i~~A~er----g--~~~~~ 268 (637)
.....++.+.+.+ ...+ +.+|||||||+|.++..|+++ +..++.+ |+++.+++.|+++ + ..+.+
T Consensus 62 ~~~~~~~~l~~~l~~~~~~~~--~~~vLDiGcG~G~~~~~l~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~~~ 136 (297)
T 2o57_A 62 ASLRTDEWLASELAMTGVLQR--QAKGLDLGAGYGGAARFLVRKFGVSIDCL---NIAPVQNKRNEEYNNQAGLADNITV 136 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCCCT--TCEEEEETCTTSHHHHHHHHHHCCEEEEE---ESCHHHHHHHHHHHHHHTCTTTEEE
T ss_pred HHHHHHHHHHHHhhhccCCCC--CCEEEEeCCCCCHHHHHHHHHhCCEEEEE---eCCHHHHHHHHHHHHhcCCCcceEE
Confidence 3445556666666 4444 349999999999999999987 5544444 4455555555432 3 35889
Q ss_pred EEeccccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 269 GVMASIRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 269 ~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
..+|...+|+++++||+|++..+++|+. +...++.++.|+|||||.+++..+
T Consensus 137 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 137 KYGSFLEIPCEDNSYDFIWSQDAFLHSP--DKLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp EECCTTSCSSCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcCcccCCCCCCCEeEEEecchhhhcC--CHHHHHHHHHHHcCCCeEEEEEEe
Confidence 9999999999999999999999998887 799999999999999999999875
No 12
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.48 E-value=1.1e-13 Score=141.55 Aligned_cols=116 Identities=17% Similarity=0.119 Sum_probs=84.9
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc----CCEEEEcCccccHHHHHHHHHHc----C--CCeEEEEe
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFALER----G--VPALIGVM 271 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~----~v~~vdisp~Dls~a~i~~A~er----g--~~~~~~~~ 271 (637)
+..++.+..++......+.+|||||||+|.++..|+++ ++.++++ |+++.|++.|+++ + .++.+..+
T Consensus 54 ~~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gv---D~s~~ml~~A~~~~~~~~~~~~v~~~~~ 130 (261)
T 4gek_A 54 SNIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAI---DNSPAMIERCRRHIDAYKAPTPVDVIEG 130 (261)
T ss_dssp HHHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEE---ESCHHHHHHHHHHHHTSCCSSCEEEEES
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEE---ECCHHHHHHHHHHHHhhccCceEEEeec
Confidence 33344444444322223449999999999999999875 4455555 5566677666653 2 35788999
Q ss_pred ccccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 272 ASIRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 272 d~~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
|...+|++ .||+|+++.+++|+.+++...+|+++.|+|||||.|+++.+
T Consensus 131 D~~~~~~~--~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 131 DIRDIAIE--NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp CTTTCCCC--SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccccccc--ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 98888875 59999999999777753556799999999999999999864
No 13
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.48 E-value=1.6e-13 Score=137.35 Aligned_cols=114 Identities=18% Similarity=0.216 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc-CCEEEEcCccccHHHHHHHHHH----cCC--CeEEEEecc
Q 006633 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALE----RGV--PALIGVMAS 273 (637)
Q Consensus 201 ~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-~v~~vdisp~Dls~a~i~~A~e----rg~--~~~~~~~d~ 273 (637)
....++.+.+.+...++. +|||||||+|.++..|++. +..++.+ |+++.+++.|++ .+. ++.+..+|.
T Consensus 21 ~~~~~~~l~~~~~~~~~~--~VLDiGcG~G~~~~~la~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~~~v~~~~~d~ 95 (256)
T 1nkv_A 21 TEEKYATLGRVLRMKPGT--RILDLGSGSGEMLCTWARDHGITGTGI---DMSSLFTAQAKRRAEELGVSERVHFIHNDA 95 (256)
T ss_dssp CHHHHHHHHHHTCCCTTC--EEEEETCTTCHHHHHHHHHTCCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEESCC
T ss_pred CHHHHHHHHHhcCCCCCC--EEEEECCCCCHHHHHHHHhcCCeEEEE---eCCHHHHHHHHHHHHhcCCCcceEEEECCh
Confidence 355667777777655544 9999999999999999876 4444443 444445444433 343 488999999
Q ss_pred ccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 274 IRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 274 ~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
..+++ +++||+|+|..+++|+. +...+|+++.|+|||||.+++..+
T Consensus 96 ~~~~~-~~~fD~V~~~~~~~~~~--~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 96 AGYVA-NEKCDVAACVGATWIAG--GFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp TTCCC-SSCEEEEEEESCGGGTS--SSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred HhCCc-CCCCCEEEECCChHhcC--CHHHHHHHHHHHcCCCeEEEEecC
Confidence 98888 88999999999997777 789999999999999999999865
No 14
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.48 E-value=1.8e-13 Score=133.99 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=88.3
Q ss_pred HHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCC-CeEEEEeccccCCCCCCCeeEE
Q 006633 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGV-PALIGVMASIRLPYPSRAFDMA 286 (637)
Q Consensus 208 L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~-~~~~~~~d~~~Lpfpd~sFDlV 286 (637)
+.+.+...+ +.+|||+|||+|.++..|++++..++.+ |+++.+++.++++.. .+.+..+|...++++ ++||+|
T Consensus 37 ~l~~~~~~~--~~~vLDiGcG~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~-~~fD~v 110 (220)
T 3hnr_A 37 ILEDVVNKS--FGNVLEFGVGTGNLTNKLLLAGRTVYGI---EPSREMRMIAKEKLPKEFSITEGDFLSFEVP-TSIDTI 110 (220)
T ss_dssp HHHHHHHTC--CSEEEEECCTTSHHHHHHHHTTCEEEEE---CSCHHHHHHHHHHSCTTCCEESCCSSSCCCC-SCCSEE
T ss_pred HHHHhhccC--CCeEEEeCCCCCHHHHHHHhCCCeEEEE---eCCHHHHHHHHHhCCCceEEEeCChhhcCCC-CCeEEE
Confidence 334443344 3499999999999999999987766666 777788888877755 678888899999988 999999
Q ss_pred EeccccccCCcCCHHH--HHHHHHhcccCCeEEEEEeC
Q 006633 287 HCSRCLIPWGQYADGL--YLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 287 ~~s~~L~h~~~~d~~~--~L~ei~RvLKPGG~Lvls~p 322 (637)
++..+++|+. +... ++.++.|+|||||.+++..+
T Consensus 111 ~~~~~l~~~~--~~~~~~~l~~~~~~LkpgG~l~i~~~ 146 (220)
T 3hnr_A 111 VSTYAFHHLT--DDEKNVAIAKYSQLLNKGGKIVFADT 146 (220)
T ss_dssp EEESCGGGSC--HHHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EECcchhcCC--hHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 9999998887 4555 99999999999999999975
No 15
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.47 E-value=3e-13 Score=133.69 Aligned_cols=101 Identities=15% Similarity=0.049 Sum_probs=84.3
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCC-CeEEEEeccccCCCCCCCeeEEEeccccccCCc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGV-PALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQ 297 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~-~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~ 297 (637)
+.+|||||||+|.++..|++++..++++ |+++.+++.|+++.. ++.+...+...+ +++++||+|++..+++|+.
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~- 117 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEHFNDITCV---EASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHID- 117 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTTCSCEEEE---ESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGCS-
T ss_pred CCcEEEECCCCCHHHHHHHHhCCcEEEE---eCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhhc-
Confidence 3489999999999999999885444444 556778878877654 688888888777 5788999999999998887
Q ss_pred CCHHHHHHHHH-hcccCCeEEEEEeCCCC
Q 006633 298 YADGLYLIEVD-RVLRPGGYWILSGPPVN 325 (637)
Q Consensus 298 ~d~~~~L~ei~-RvLKPGG~Lvls~pp~~ 325 (637)
++..+|+++. |+|||||++++..|...
T Consensus 118 -~~~~~l~~~~~~~LkpgG~l~i~~~~~~ 145 (250)
T 2p7i_A 118 -DPVALLKRINDDWLAEGGRLFLVCPNAN 145 (250)
T ss_dssp -SHHHHHHHHHHTTEEEEEEEEEEEECTT
T ss_pred -CHHHHHHHHHHHhcCCCCEEEEEcCChH
Confidence 7899999999 99999999999987543
No 16
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.46 E-value=4.5e-13 Score=134.25 Aligned_cols=109 Identities=17% Similarity=0.156 Sum_probs=89.8
Q ss_pred HHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCC-EEEEcCccccHHHHHHHHHHcC--CCeEEEEeccccCCCCCCCe
Q 006633 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERG--VPALIGVMASIRLPYPSRAF 283 (637)
Q Consensus 207 ~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v-~~vdisp~Dls~a~i~~A~erg--~~~~~~~~d~~~Lpfpd~sF 283 (637)
.+.+.++.. .+.+|||||||+|.++..|++++. .++.+ |+++.+++.|+++. ..+.+...|...+++++++|
T Consensus 35 ~l~~~~~~~--~~~~vLD~GcG~G~~~~~l~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~f 109 (253)
T 3g5l_A 35 ELKKMLPDF--NQKTVLDLGCGFGWHCIYAAEHGAKKVLGI---DLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAY 109 (253)
T ss_dssp HHHTTCCCC--TTCEEEEETCTTCHHHHHHHHTTCSEEEEE---ESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCE
T ss_pred HHHHhhhcc--CCCEEEEECCCCCHHHHHHHHcCCCEEEEE---ECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCe
Confidence 344444433 345999999999999999999865 55555 66777887777664 46889999999999999999
Q ss_pred eEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 284 DMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 284 DlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
|+|++..+++|+. +...+++++.|+|||||.++++.+
T Consensus 110 D~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 110 NVVLSSLALHYIA--SFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp EEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEchhhhhhh--hHHHHHHHHHHHcCCCcEEEEEeC
Confidence 9999999998885 899999999999999999999854
No 17
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.46 E-value=5.6e-13 Score=132.27 Aligned_cols=130 Identities=15% Similarity=0.110 Sum_probs=97.3
Q ss_pred CEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCC------CeEEEEeccccCCCCCCCeeEEEeccccc
Q 006633 220 RTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGV------PALIGVMASIRLPYPSRAFDMAHCSRCLI 293 (637)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~------~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~ 293 (637)
.+|||||||+|.++..|++.+..++.+ |+++.+++.|+++.. .+.+..+|...++ ++++||+|+++.+++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~ 143 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVGL---DISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFC 143 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEEE---CSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTT
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEEE---ECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhh
Confidence 489999999999999999887655555 666677777765532 3788888888877 556999999999998
Q ss_pred cCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHhceeeec
Q 006633 294 PWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 360 (637)
Q Consensus 294 h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w~~v~ 360 (637)
|+..++...+++++.++|||||+|++...+.........|.. ..+.++.+.+..+|+.+.
T Consensus 144 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~Gf~~~~ 203 (235)
T 3lcc_A 144 AIEPEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKV-------DVSTFEEVLVPIGFKAVS 203 (235)
T ss_dssp TSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCC-------CHHHHHHHHGGGTEEEEE
T ss_pred cCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccC-------CHHHHHHHHHHcCCeEEE
Confidence 887667889999999999999999998754432211111222 234567778888887654
No 18
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.45 E-value=3.3e-13 Score=137.42 Aligned_cols=100 Identities=14% Similarity=0.079 Sum_probs=83.9
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcC----------------------CCeEEEEeccccC
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERG----------------------VPALIGVMASIRL 276 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg----------------------~~~~~~~~d~~~L 276 (637)
+.+|||+|||+|..+..|+++|..++++ |+++.+++.|+++. .++.+.++|...+
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~G~~V~gv---D~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADRGHTVVGV---EISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHTTCEEEEE---CSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCeEEEeCCCCcHHHHHHHHCCCeEEEE---ECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 4499999999999999999998777777 77778887775432 4688999999999
Q ss_pred CCCC-CCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 277 PYPS-RAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 277 pfpd-~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
++++ ++||+|++..++++++.++...+++++.|+|||||.|++.+
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~ 191 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV 191 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 8764 89999999999988876467789999999999999997653
No 19
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.45 E-value=4.5e-13 Score=135.62 Aligned_cols=116 Identities=25% Similarity=0.435 Sum_probs=90.2
Q ss_pred cHHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc-CCEEEEcCccccHHHHHHHHHHc----CC--CeEEEEec
Q 006633 200 GADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMA 272 (637)
Q Consensus 200 g~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-~v~~vdisp~Dls~a~i~~A~er----g~--~~~~~~~d 272 (637)
......+.+.+.++..++ .+|||||||+|.++..++++ +..++.+ |+++.+++.++++ +. .+.+...|
T Consensus 45 ~~~~~~~~l~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~~~~~~d 119 (273)
T 3bus_A 45 ATDRLTDEMIALLDVRSG--DRVLDVGCGIGKPAVRLATARDVRVTGI---SISRPQVNQANARATAAGLANRVTFSYAD 119 (273)
T ss_dssp HHHHHHHHHHHHSCCCTT--CEEEEESCTTSHHHHHHHHHSCCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred HHHHHHHHHHHhcCCCCC--CEEEEeCCCCCHHHHHHHHhcCCEEEEE---eCCHHHHHHHHHHHHhcCCCcceEEEECc
Confidence 344555666666655544 49999999999999999875 5444444 4455555555433 33 48888999
Q ss_pred cccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 273 SIRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 273 ~~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
...+|+++++||+|++..+++|+. +...+++++.|+|||||.+++..+
T Consensus 120 ~~~~~~~~~~fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~ 167 (273)
T 3bus_A 120 AMDLPFEDASFDAVWALESLHHMP--DRGRALREMARVLRPGGTVAIADF 167 (273)
T ss_dssp TTSCCSCTTCEEEEEEESCTTTSS--CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cccCCCCCCCccEEEEechhhhCC--CHHHHHHHHHHHcCCCeEEEEEEe
Confidence 999999999999999999998886 789999999999999999999865
No 20
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.44 E-value=2.5e-13 Score=132.46 Aligned_cols=134 Identities=17% Similarity=0.142 Sum_probs=97.8
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccCCcC
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQY 298 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~~ 298 (637)
+.+|||||||+|.++..|++++..++.+ |+++.+++.++++. .+.+...+...++ ++++||+|+++.+++|+..+
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~-~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~ 118 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAGFDVDAT---DGSPELAAEASRRL-GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRD 118 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHH-TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHH
T ss_pred CCcEEEECCCCCHHHHHHHHcCCeEEEE---CCCHHHHHHHHHhc-CCceEEeeeccCC-CCCcEEEEEecCchhhcCHH
Confidence 3499999999999999999987666665 66677777777663 4455667788888 78999999999999998854
Q ss_pred CHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHhc-eeeec
Q 006633 299 ADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLC-WKKLI 360 (637)
Q Consensus 299 d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~-w~~v~ 360 (637)
+...+++++.|+|||||++++..+......... +... ......+.+..++++.+ |+.+.
T Consensus 119 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~l~~aG~f~~~~ 178 (211)
T 3e23_A 119 ELADVLKLIWRALKPGGLFYASYKSGEGEGRDK-LARY--YNYPSEEWLRARYAEAGTWASVA 178 (211)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEECCSSCEECT-TSCE--ECCCCHHHHHHHHHHHCCCSEEE
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEcCCCcccccc-cchh--ccCCCHHHHHHHHHhCCCcEEEE
Confidence 678999999999999999999976443221110 0000 00112345777888888 87664
No 21
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.44 E-value=5e-13 Score=129.60 Aligned_cols=112 Identities=20% Similarity=0.256 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc-C--CEEEEcCccccHHHHHHHHHHc----C--CCeEEEEe
Q 006633 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-N--ILAVSFAPRDTHEAQVQFALER----G--VPALIGVM 271 (637)
Q Consensus 201 ~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-~--v~~vdisp~Dls~a~i~~A~er----g--~~~~~~~~ 271 (637)
.....+.+.+.++..+ .+|||+|||+|.++..|+++ + ++++|+ ++.+++.|+++ + ..+.+...
T Consensus 29 ~~~~~~~~~~~~~~~~---~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~-----s~~~~~~a~~~~~~~~~~~~~~~~~~ 100 (219)
T 3dlc_A 29 YPIIAENIINRFGITA---GTCIDIGSGPGALSIALAKQSDFSIRALDF-----SKHMNEIALKNIADANLNDRIQIVQG 100 (219)
T ss_dssp HHHHHHHHHHHHCCCE---EEEEEETCTTSHHHHHHHHHSEEEEEEEES-----CHHHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred cHHHHHHHHHhcCCCC---CEEEEECCCCCHHHHHHHHcCCCeEEEEEC-----CHHHHHHHHHHHHhccccCceEEEEc
Confidence 3445556666655332 28999999999999999986 3 455555 44555544433 3 35889999
Q ss_pred ccccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 272 ASIRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 272 d~~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+...+++++++||+|+++.+++|+. +...+++++.|+|||||.+++..+
T Consensus 101 d~~~~~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 101 DVHNIPIEDNYADLIVSRGSVFFWE--DVATAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp BTTBCSSCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CHHHCCCCcccccEEEECchHhhcc--CHHHHHHHHHHhCCCCCEEEEEec
Confidence 9999999999999999999998885 899999999999999999999864
No 22
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.44 E-value=4.4e-13 Score=126.02 Aligned_cols=103 Identities=17% Similarity=0.159 Sum_probs=84.3
Q ss_pred HHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEec
Q 006633 210 KLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCS 289 (637)
Q Consensus 210 ~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s 289 (637)
+.++..++ .+|||+|||+|.++..+++.+..++.+ |+++.+++.++++...+.+...+ +++++++||+|+++
T Consensus 11 ~~~~~~~~--~~vLDiG~G~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~v~~~~~d---~~~~~~~~D~v~~~ 82 (170)
T 3i9f_A 11 PNIFEGKK--GVIVDYGCGNGFYCKYLLEFATKLYCI---DINVIALKEVKEKFDSVITLSDP---KEIPDNSVDFILFA 82 (170)
T ss_dssp HHHHSSCC--EEEEEETCTTCTTHHHHHTTEEEEEEE---CSCHHHHHHHHHHCTTSEEESSG---GGSCTTCEEEEEEE
T ss_pred HhcCcCCC--CeEEEECCCCCHHHHHHHhhcCeEEEE---eCCHHHHHHHHHhCCCcEEEeCC---CCCCCCceEEEEEc
Confidence 34444443 489999999999999999885344444 66677888887776678888776 78889999999999
Q ss_pred cccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 290 RCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 290 ~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.+++|+. +...+++++.|+|||||++++..+
T Consensus 83 ~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 113 (170)
T 3i9f_A 83 NSFHDMD--DKQHVISEVKRILKDDGRVIIIDW 113 (170)
T ss_dssp SCSTTCS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cchhccc--CHHHHHHHHHHhcCCCCEEEEEEc
Confidence 9998886 799999999999999999999865
No 23
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.43 E-value=1e-12 Score=125.91 Aligned_cols=109 Identities=16% Similarity=0.277 Sum_probs=83.3
Q ss_pred HHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHH----cCC-CeEEEEeccccCCCCCCC
Q 006633 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALE----RGV-PALIGVMASIRLPYPSRA 282 (637)
Q Consensus 208 L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~e----rg~-~~~~~~~d~~~Lpfpd~s 282 (637)
+.+.++..++ .+|||+|||+|.++..|++++..++.+ |+++.+++.+++ .+. ++.+...|...+++ +++
T Consensus 24 l~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~ 97 (199)
T 2xvm_A 24 VLEAVKVVKP--GKTLDLGCGNGRNSLYLAANGYDVDAW---DKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQ 97 (199)
T ss_dssp HHHHTTTSCS--CEEEEETCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCC
T ss_pred HHHHhhccCC--CeEEEEcCCCCHHHHHHHHCCCeEEEE---ECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCC
Confidence 4445544443 499999999999999999886544444 444444444433 233 68888899888888 889
Q ss_pred eeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 283 FDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 283 FDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
||+|+++.+++|+..++...++.++.++|||||.+++..+
T Consensus 98 ~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 98 YDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp EEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 9999999999888755788999999999999999888653
No 24
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.43 E-value=6.8e-13 Score=132.47 Aligned_cols=110 Identities=19% Similarity=0.273 Sum_probs=86.0
Q ss_pred HHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHH----cC-CCeEEEEeccccCCCCC
Q 006633 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALE----RG-VPALIGVMASIRLPYPS 280 (637)
Q Consensus 206 ~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~e----rg-~~~~~~~~d~~~Lpfpd 280 (637)
..+.+.+...++. +|||||||+|.++..+++.+..++.+ |+++.+++.+++ .+ .++.+...+...+|+++
T Consensus 11 ~~~~~~~~~~~~~--~vLDiGcG~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 11 GLMIKTAECRAEH--RVLDIGAGAGHTALAFSPYVQECIGV---DATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHHHHHTCCTTC--EEEEESCTTSHHHHHHGGGSSEEEEE---ESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCT
T ss_pred chHHHHhCcCCCC--EEEEEccCcCHHHHHHHHhCCEEEEE---ECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCC
Confidence 3455565555544 99999999999999999885444333 444444444433 23 35888899999999999
Q ss_pred CCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 281 RAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 281 ~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++||+|++..+++|+. +...++.++.|+|||||++++..+
T Consensus 86 ~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 125 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFS--DVRKAVREVARVLKQDGRFLLVDH 125 (239)
T ss_dssp TCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcEEEEEECCchhhcc--CHHHHHHHHHHHcCCCcEEEEEEc
Confidence 9999999999998887 799999999999999999999864
No 25
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.42 E-value=6.5e-13 Score=130.18 Aligned_cols=115 Identities=14% Similarity=0.105 Sum_probs=86.4
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC--CEEEEcCccccHHHHHHHHHHcC----C------CeEEE
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALERG----V------PALIG 269 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~--v~~vdisp~Dls~a~i~~A~erg----~------~~~~~ 269 (637)
....+.+.+.+...++ .+|||||||+|.++..|++++ ..++.+ |+++.+++.|+++. . .+.+.
T Consensus 15 ~~~~~~l~~~l~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~~~~v~~~ 89 (217)
T 3jwh_A 15 QQRMNGVVAALKQSNA--RRVIDLGCGQGNLLKILLKDSFFEQITGV---DVSYRSLEIAQERLDRLRLPRNQWERLQLI 89 (217)
T ss_dssp HHHHHHHHHHHHHTTC--CEEEEETCTTCHHHHHHHHCTTCSEEEEE---ESCHHHHHHHHHHHTTCCCCHHHHTTEEEE
T ss_pred HHHHHHHHHHHHhcCC--CEEEEeCCCCCHHHHHHHhhCCCCEEEEE---ECCHHHHHHHHHHHHHhcCCcccCcceEEE
Confidence 3445566666665544 499999999999999999873 344444 45556666665441 1 58888
Q ss_pred EeccccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 270 VMASIRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 270 ~~d~~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
..|...+++++++||+|+++.+++|+..++...+++++.++|||||.++++.
T Consensus 90 ~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 90 QGALTYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp ECCTTSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred eCCcccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 8888777777789999999999988874334899999999999999777664
No 26
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.42 E-value=9e-13 Score=132.04 Aligned_cols=97 Identities=16% Similarity=0.179 Sum_probs=83.5
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc----CCCeEEEEeccccCCCCCCCeeEEEecccccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLPYPSRAFDMAHCSRCLIP 294 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er----g~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h 294 (637)
+.+|||+|||+|.++..|++++..++.+ |+++.+++.++++ ..++.+...+...+++++++||+|++..+++|
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 116 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIARGYRYIAL---DADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHL 116 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTTTCEEEEE---ESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCEEEEeCCcCCHHHHHHHHCCCEEEEE---ECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhh
Confidence 4599999999999999999886655555 6667777777665 35688999999999999999999999999976
Q ss_pred CCcCCHHHHHHHHHhcccCCeEEEEE
Q 006633 295 WGQYADGLYLIEVDRVLRPGGYWILS 320 (637)
Q Consensus 295 ~~~~d~~~~L~ei~RvLKPGG~Lvls 320 (637)
+. +...++.++.|+|||||.+++.
T Consensus 117 ~~--~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 117 VP--DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp CT--THHHHHHHHHHHEEEEEEEEEE
T ss_pred cC--CHHHHHHHHHHHCCCCcEEEEE
Confidence 66 7999999999999999999997
No 27
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.42 E-value=1.2e-12 Score=133.41 Aligned_cols=108 Identities=14% Similarity=0.173 Sum_probs=89.3
Q ss_pred HHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEE
Q 006633 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMA 286 (637)
Q Consensus 207 ~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV 286 (637)
.+.+.+...+ +.+|||||||+|.++..|++.+..++.+ |+++.+++.++++..++.+..+|...+|+ +++||+|
T Consensus 48 ~l~~~l~~~~--~~~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD~v 121 (279)
T 3ccf_A 48 DLLQLLNPQP--GEFILDLGCGTGQLTEKIAQSGAEVLGT---DNAATMIEKARQNYPHLHFDVADARNFRV-DKPLDAV 121 (279)
T ss_dssp HHHHHHCCCT--TCEEEEETCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHCTTSCEEECCTTTCCC-SSCEEEE
T ss_pred HHHHHhCCCC--CCEEEEecCCCCHHHHHHHhCCCeEEEE---ECCHHHHHHHHhhCCCCEEEECChhhCCc-CCCcCEE
Confidence 3445554444 3499999999999999999886666666 66778888887776677888889988887 5899999
Q ss_pred EeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 287 HCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 287 ~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++..+++|+. +...++.++.|+|||||++++..+
T Consensus 122 ~~~~~l~~~~--d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 122 FSNAMLHWVK--EPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEcchhhhCc--CHHHHHHHHHHhcCCCcEEEEEec
Confidence 9999997766 899999999999999999999875
No 28
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.42 E-value=4.5e-13 Score=135.70 Aligned_cols=112 Identities=17% Similarity=0.191 Sum_probs=94.0
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSR 281 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~ 281 (637)
....+.+.+.++..++ .+|||||||+|.++..|++.+..++++ |+++.+++.++++. ++.+.+.|...+|++++
T Consensus 20 ~~~~~~l~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~-~~~~~~~d~~~~~~~~~ 93 (261)
T 3ege_A 20 IRIVNAIINLLNLPKG--SVIADIGAGTGGYSVALANQGLFVYAV---EPSIVMRQQAVVHP-QVEWFTGYAENLALPDK 93 (261)
T ss_dssp HHHHHHHHHHHCCCTT--CEEEEETCTTSHHHHHHHTTTCEEEEE---CSCHHHHHSSCCCT-TEEEECCCTTSCCSCTT
T ss_pred HHHHHHHHHHhCCCCC--CEEEEEcCcccHHHHHHHhCCCEEEEE---eCCHHHHHHHHhcc-CCEEEECchhhCCCCCC
Confidence 3456677777765443 499999999999999999987766776 67778887775554 88999999999999999
Q ss_pred CeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 282 AFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 282 sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+||+|++..+++|+. +...+++++.|+|| ||++++..+
T Consensus 94 ~fD~v~~~~~l~~~~--~~~~~l~~~~~~Lk-gG~~~~~~~ 131 (261)
T 3ege_A 94 SVDGVISILAIHHFS--HLEKSFQEMQRIIR-DGTIVLLTF 131 (261)
T ss_dssp CBSEEEEESCGGGCS--SHHHHHHHHHHHBC-SSCEEEEEE
T ss_pred CEeEEEEcchHhhcc--CHHHHHHHHHHHhC-CcEEEEEEc
Confidence 999999999998886 89999999999999 998888764
No 29
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.41 E-value=1.7e-12 Score=128.24 Aligned_cols=118 Identities=17% Similarity=0.165 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc----CCCeEEEEeccccC
Q 006633 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRL 276 (637)
Q Consensus 201 ~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er----g~~~~~~~~d~~~L 276 (637)
.+...+.+.+++........+|||+|||+|.++..|++.+..++.+ |+++.+++.++++ +..+.+...+...+
T Consensus 20 ~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~---D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 96 (246)
T 1y8c_A 20 YKKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAV---DLSQEMLSEAENKFRSQGLKPRLACQDISNL 96 (246)
T ss_dssp HHHHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGSSEEEEE---CSCHHHHHHHHHHHHHTTCCCEEECCCGGGC
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCCCcEEEE---ECCHHHHHHHHHHHhhcCCCeEEEecccccC
Confidence 3555666667665442245599999999999999999987555555 5555565555543 34678888898888
Q ss_pred CCCCCCeeEEEecc-ccccCCc-CCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 277 PYPSRAFDMAHCSR-CLIPWGQ-YADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 277 pfpd~sFDlV~~s~-~L~h~~~-~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+++ ++||+|++.. +++|+.. ++...++.++.++|||||.+++..+
T Consensus 97 ~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 97 NIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp CCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred Ccc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 877 8899999998 9988842 2688999999999999999999765
No 30
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.41 E-value=4.4e-13 Score=137.26 Aligned_cols=116 Identities=18% Similarity=0.292 Sum_probs=91.0
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcC---------CCeEEEEec
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERG---------VPALIGVMA 272 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg---------~~~~~~~~d 272 (637)
+.+.+.+.+.++..++ .+|||||||+|.++..|++++..++++ |+++.+++.|+++. ..+.+...+
T Consensus 43 ~~~~~~l~~~l~~~~~--~~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d 117 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGC--HRVLDVACGTGVDSIMLVEEGFSVTSV---DASDKMLKYALKERWNRRKEPAFDKWVIEEAN 117 (293)
T ss_dssp HHHHHHHHHHHHHTTC--CEEEETTCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHTTTSHHHHTCEEEECC
T ss_pred HHHHHHHHHHhcccCC--CEEEEecCCCCHHHHHHHHCCCeEEEE---ECCHHHHHHHHHhhhhcccccccceeeEeecC
Confidence 5556667777765544 499999999999999999997655555 55666666665421 346778888
Q ss_pred cccCC---CCCCCeeEEEec-cccccCCc-----CCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 273 SIRLP---YPSRAFDMAHCS-RCLIPWGQ-----YADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 273 ~~~Lp---fpd~sFDlV~~s-~~L~h~~~-----~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
...++ +++++||+|+|. .+++|+.+ ++...+++++.|+|||||+|++..+
T Consensus 118 ~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 118 WLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp GGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 88887 889999999998 89988872 1289999999999999999999876
No 31
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.41 E-value=2.6e-12 Score=122.03 Aligned_cols=124 Identities=15% Similarity=0.072 Sum_probs=96.4
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEec-cccccCCc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCS-RCLIPWGQ 297 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s-~~L~h~~~ 297 (637)
..+|||+|||+|.++..+++.+..++.+ |+++.+++.++++..++.+...+...+++++++||+|+++ .+++|+..
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~~v~~~---D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~ 123 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQGHDVLGT---DLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAE 123 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCH
T ss_pred CCeEEEECCCCCHHHHHHHHCCCcEEEE---cCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcCh
Confidence 3499999999999999999987666666 6677888888877767888888988888888999999998 67766653
Q ss_pred CCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHhceeeec
Q 006633 298 YADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 360 (637)
Q Consensus 298 ~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w~~v~ 360 (637)
++...++.++.++|||||.+++..+.... .....+..+.+..+|+.+.
T Consensus 124 ~~~~~~l~~~~~~l~~~G~l~~~~~~~~~---------------~~~~~~~~~l~~~Gf~~~~ 171 (195)
T 3cgg_A 124 DGREPALANIHRALGADGRAVIGFGAGRG---------------WVFGDFLEVAERVGLELEN 171 (195)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEETTSS---------------CCHHHHHHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEeCCCCC---------------cCHHHHHHHHHHcCCEEee
Confidence 35688999999999999999998653210 1123456667777886553
No 32
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.40 E-value=7.4e-13 Score=132.59 Aligned_cols=110 Identities=17% Similarity=0.197 Sum_probs=88.4
Q ss_pred HHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCC
Q 006633 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRA 282 (637)
Q Consensus 205 i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~s 282 (637)
...+.+.+...+ +.+|||||||+|.++..++++ +..++.+ |+++.+++.++++..++.+...|...++ ++++
T Consensus 22 ~~~l~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~---D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~ 95 (259)
T 2p35_A 22 ARDLLAQVPLER--VLNGYDLGCGPGNSTELLTDRYGVNVITGI---DSDDDMLEKAADRLPNTNFGKADLATWK-PAQK 95 (259)
T ss_dssp HHHHHTTCCCSC--CSSEEEETCTTTHHHHHHHHHHCTTSEEEE---ESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSC
T ss_pred HHHHHHhcCCCC--CCEEEEecCcCCHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHhCCCcEEEECChhhcC-ccCC
Confidence 334555554433 348999999999999999887 4444444 5566777778777667889999998888 7889
Q ss_pred eeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 283 FDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 283 FDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
||+|+++.+++|+. +...++.++.++|||||.+++..+
T Consensus 96 fD~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 133 (259)
T 2p35_A 96 ADLLYANAVFQWVP--DHLAVLSQLMDQLESGGVLAVQMP 133 (259)
T ss_dssp EEEEEEESCGGGST--THHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cCEEEEeCchhhCC--CHHHHHHHHHHhcCCCeEEEEEeC
Confidence 99999999997765 899999999999999999999875
No 33
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.40 E-value=8.9e-13 Score=128.16 Aligned_cols=111 Identities=13% Similarity=0.079 Sum_probs=89.6
Q ss_pred HHHHHHhc-ccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcC-CCeEEEEeccccCCCCCCCe
Q 006633 206 DDIGKLIN-LKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERG-VPALIGVMASIRLPYPSRAF 283 (637)
Q Consensus 206 ~~L~~lL~-~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg-~~~~~~~~d~~~Lpfpd~sF 283 (637)
..+.+.+. ..+ +.+|||||||+|.++..|++++..++.+ |+++.+++.+++.+ .++.+...|...+ +++++|
T Consensus 35 ~~~~~~l~~~~~--~~~vLdiG~G~G~~~~~l~~~~~~v~~~---D~s~~~~~~a~~~~~~~~~~~~~d~~~~-~~~~~~ 108 (218)
T 3ou2_A 35 PAALERLRAGNI--RGDVLELASGTGYWTRHLSGLADRVTAL---DGSAEMIAEAGRHGLDNVEFRQQDLFDW-TPDRQW 108 (218)
T ss_dssp HHHHHHHTTTTS--CSEEEEESCTTSHHHHHHHHHSSEEEEE---ESCHHHHHHHGGGCCTTEEEEECCTTSC-CCSSCE
T ss_pred HHHHHHHhcCCC--CCeEEEECCCCCHHHHHHHhcCCeEEEE---eCCHHHHHHHHhcCCCCeEEEecccccC-CCCCce
Confidence 34445544 333 3499999999999999999987666666 66778888887766 5688888898887 788999
Q ss_pred eEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 284 DMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 284 DlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
|+|+++.+++|+..++...+++++.++|||||.+++..+
T Consensus 109 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 109 DAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 999999999888742248999999999999999999865
No 34
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.40 E-value=1.6e-12 Score=128.66 Aligned_cols=109 Identities=19% Similarity=0.247 Sum_probs=90.4
Q ss_pred HHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCC-EEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccCCCCCCCe
Q 006633 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRLPYPSRAF 283 (637)
Q Consensus 207 ~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v-~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~Lpfpd~sF 283 (637)
.+.++++..+ +.+|||||||+|.++..+++++. .++.+ |+++.+++.++++.. .+.+...+...+++++++|
T Consensus 34 ~l~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~f 108 (243)
T 3bkw_A 34 ALRAMLPEVG--GLRIVDLGCGFGWFCRWAHEHGASYVLGL---DLSEKMLARARAAGPDTGITYERADLDKLHLPQDSF 108 (243)
T ss_dssp HHHHHSCCCT--TCEEEEETCTTCHHHHHHHHTTCSEEEEE---ESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCE
T ss_pred HHHHhccccC--CCEEEEEcCcCCHHHHHHHHCCCCeEEEE---cCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCc
Confidence 4555555444 34999999999999999998866 56666 667788888877653 4788888998899889999
Q ss_pred eEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 284 DMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 284 DlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
|+|++..+++|+. +...+++++.++|||||.+++..+
T Consensus 109 D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 109 DLAYSSLALHYVE--DVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp EEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEeccccccc--hHHHHHHHHHHhcCcCcEEEEEeC
Confidence 9999999998876 799999999999999999999864
No 35
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.40 E-value=1.3e-12 Score=131.90 Aligned_cols=113 Identities=13% Similarity=0.131 Sum_probs=89.5
Q ss_pred HHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCee
Q 006633 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFD 284 (637)
Q Consensus 205 i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFD 284 (637)
.+.+.+++........+|||||||+|.++..|++++..++.+ |+++.+++.|+++...+.+..+|...+++ +++||
T Consensus 37 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~fD 112 (263)
T 3pfg_A 37 AADLAALVRRHSPKAASLLDVACGTGMHLRHLADSFGTVEGL---ELSADMLAIARRRNPDAVLHHGDMRDFSL-GRRFS 112 (263)
T ss_dssp HHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTSSEEEEE---ESCHHHHHHHHHHCTTSEEEECCTTTCCC-SCCEE
T ss_pred HHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCCeEEEE---ECCHHHHHHHHhhCCCCEEEECChHHCCc-cCCcC
Confidence 334444443222234599999999999999999987666666 66778888888877788899999988887 78999
Q ss_pred EEEecc-ccccCCc-CCHHHHHHHHHhcccCCeEEEEEe
Q 006633 285 MAHCSR-CLIPWGQ-YADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 285 lV~~s~-~L~h~~~-~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+|+|.. +++|+.. ++...+++++.++|||||.|++..
T Consensus 113 ~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 151 (263)
T 3pfg_A 113 AVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEP 151 (263)
T ss_dssp EEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred EEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999998 8988752 166789999999999999999973
No 36
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.39 E-value=1.1e-12 Score=134.20 Aligned_cols=99 Identities=18% Similarity=0.081 Sum_probs=82.6
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc----C--CCeEEEEeccccCC-CCCCCeeEEEeccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----G--VPALIGVMASIRLP-YPSRAFDMAHCSRC 291 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er----g--~~~~~~~~d~~~Lp-fpd~sFDlV~~s~~ 291 (637)
+.+|||||||+|.++..|++.+..++.+ |+++.+++.|+++ + ..+.+..++...++ +++++||+|++..+
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 145 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGHQVILC---DLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAV 145 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESC
T ss_pred CCEEEEeCCcchHHHHHHHHCCCEEEEE---ECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECch
Confidence 4599999999999999999986655555 5556666666543 3 34788889988887 78899999999999
Q ss_pred cccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 292 LIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 292 L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++|+. +...+++++.++|||||.+++..+
T Consensus 146 l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 146 LEWVA--DPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp GGGCS--CHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhccc--CHHHHHHHHHHHcCCCeEEEEEEe
Confidence 98886 789999999999999999999865
No 37
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.39 E-value=7.8e-14 Score=150.84 Aligned_cols=153 Identities=10% Similarity=0.072 Sum_probs=107.7
Q ss_pred HHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEE---EEeccccCC
Q 006633 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALI---GVMASIRLP 277 (637)
Q Consensus 201 ~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~---~~~d~~~Lp 277 (637)
...+.+.+.+.+...+ +.+|||||||+|.++..|++++..++++ |+++.+++.|++++.+... ...+...++
T Consensus 92 ~~~~~~~l~~~~~~~~--~~~VLDiGcG~G~~~~~l~~~g~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~ 166 (416)
T 4e2x_A 92 FAMLARDFLATELTGP--DPFIVEIGCNDGIMLRTIQEAGVRHLGF---EPSSGVAAKAREKGIRVRTDFFEKATADDVR 166 (416)
T ss_dssp HHHHHHHHHHTTTCSS--SCEEEEETCTTTTTHHHHHHTTCEEEEE---CCCHHHHHHHHTTTCCEECSCCSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCC--CCEEEEecCCCCHHHHHHHHcCCcEEEE---CCCHHHHHHHHHcCCCcceeeechhhHhhcc
Confidence 3445555666655444 3499999999999999999998777777 7788899999888665432 223445567
Q ss_pred CCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCC--chhhhHHhHhhHHHHHHHhc
Q 006633 278 YPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNR--TTEDLKSEQNGIETIARSLC 355 (637)
Q Consensus 278 fpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~--t~e~l~~~~~~ie~la~~l~ 355 (637)
+++++||+|++..+++|+. ++..+++++.|+|||||+|++..|..........|.. ..+......+.++.++++.+
T Consensus 167 ~~~~~fD~I~~~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aG 244 (416)
T 4e2x_A 167 RTEGPANVIYAANTLCHIP--YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCG 244 (416)
T ss_dssp HHHCCEEEEEEESCGGGCT--THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTT
T ss_pred cCCCCEEEEEECChHHhcC--CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcC
Confidence 7789999999999999887 8999999999999999999998764211100000000 00011112345778888888
Q ss_pred eeeec
Q 006633 356 WKKLI 360 (637)
Q Consensus 356 w~~v~ 360 (637)
|+.+.
T Consensus 245 f~~~~ 249 (416)
T 4e2x_A 245 FELVD 249 (416)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 87654
No 38
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.39 E-value=1.4e-12 Score=128.92 Aligned_cols=116 Identities=15% Similarity=0.160 Sum_probs=89.9
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHcCC---CeEEEEeccccC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGV---PALIGVMASIRL 276 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~erg~---~~~~~~~d~~~L 276 (637)
+...+.+.+++.. ...+.+|||||||+|.++..+++. +..++.+ |+++.+++.|+++.. .+.+...|...+
T Consensus 29 ~~~~~~~~~~~~~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~d~~~~ 104 (234)
T 3dtn_A 29 DDFYGVSVSIASV-DTENPDILDLGAGTGLLSAFLMEKYPEATFTLV---DMSEKMLEIAKNRFRGNLKVKYIEADYSKY 104 (234)
T ss_dssp HHHHHHHHHTCCC-SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEE---ESCHHHHHHHHHHTCSCTTEEEEESCTTTC
T ss_pred HHHHHHHHHHhhc-CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEE---ECCHHHHHHHHHhhccCCCEEEEeCchhcc
Confidence 4444556666552 233469999999999999999987 5555555 666777777776532 688899999999
Q ss_pred CCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 277 PYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 277 pfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+++ ++||+|++..+++|+.+.+...+++++.|+|||||.+++..+
T Consensus 105 ~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 149 (234)
T 3dtn_A 105 DFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADL 149 (234)
T ss_dssp CCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 887 899999999999888642223699999999999999999864
No 39
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.39 E-value=1.8e-12 Score=126.19 Aligned_cols=98 Identities=24% Similarity=0.299 Sum_probs=82.8
Q ss_pred CCCEEEEECCCCchHHHHHhhcCC-EEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccCC
Q 006633 218 SIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWG 296 (637)
Q Consensus 218 ~~r~VLDIGCGtG~~a~~La~~~v-~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~ 296 (637)
.+.+|||+|||+|.++..+ +. .++.+ |+++.+++.++++...+.+...+...+|+++++||+|++..+++|+.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 109 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGV---EPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVE 109 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEE---CCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCS
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEE---eCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcC
Confidence 3459999999999999888 44 44444 56677777887776667888889999999999999999999998876
Q ss_pred cCCHHHHHHHHHhcccCCeEEEEEeCC
Q 006633 297 QYADGLYLIEVDRVLRPGGYWILSGPP 323 (637)
Q Consensus 297 ~~d~~~~L~ei~RvLKPGG~Lvls~pp 323 (637)
+...++.++.|+|||||.++++.+.
T Consensus 110 --~~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 110 --DVERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --CHHHHHHHHHHHcCCCCEEEEEecC
Confidence 7999999999999999999999763
No 40
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.39 E-value=1e-12 Score=130.99 Aligned_cols=136 Identities=13% Similarity=0.023 Sum_probs=94.6
Q ss_pred CCEEEEECCCCchHHHHHhhcC-CEEEEcCccccHHHHHHHHHHcC-----CCeEEEEeccccCCCCCCCeeEEEecccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRN-ILAVSFAPRDTHEAQVQFALERG-----VPALIGVMASIRLPYPSRAFDMAHCSRCL 292 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~-v~~vdisp~Dls~a~i~~A~erg-----~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L 292 (637)
..+|||||||+|.++..|++++ ..++.+ |+++.+++.|+++. ..+.+...+...+++++++||+|++..++
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 156 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLFREVDMV---DITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVI 156 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTCSEEEEE---ESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCG
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCEEEEE---eCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchh
Confidence 5599999999999999998873 234444 55556666666543 23678888888899888899999999999
Q ss_pred ccCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHhceeeec
Q 006633 293 IPWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 360 (637)
Q Consensus 293 ~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w~~v~ 360 (637)
+|+.+++...++.++.++|||||++++..+...... .|...........+++.+++++.+|+.+.
T Consensus 157 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 221 (241)
T 2ex4_A 157 GHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGV---ILDDVDSSVCRDLDVVRRIICSAGLSLLA 221 (241)
T ss_dssp GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSSE---EEETTTTEEEEBHHHHHHHHHHTTCCEEE
T ss_pred hhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCcc---eecccCCcccCCHHHHHHHHHHcCCeEEE
Confidence 888732345899999999999999999865222100 01111111111345577788888886654
No 41
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.38 E-value=1.6e-12 Score=126.90 Aligned_cols=113 Identities=12% Similarity=0.168 Sum_probs=85.7
Q ss_pred HHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcC---CCeEEEEeccccCCCCCCC
Q 006633 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERG---VPALIGVMASIRLPYPSRA 282 (637)
Q Consensus 206 ~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg---~~~~~~~~d~~~Lpfpd~s 282 (637)
..+...+...+ ..+|||+|||+|.++..|++++..++.+ |+++.+++.++++. .++.+...|...++ ++++
T Consensus 41 ~~l~~~~~~~~--~~~vLDiGcG~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~ 114 (216)
T 3ofk_A 41 QLLRLSLSSGA--VSNGLEIGCAAGAFTEKLAPHCKRLTVI---DVMPRAIGRACQRTKRWSHISWAATDILQFS-TAEL 114 (216)
T ss_dssp HHHHHHTTTSS--EEEEEEECCTTSHHHHHHGGGEEEEEEE---ESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCC
T ss_pred HHHHHHcccCC--CCcEEEEcCCCCHHHHHHHHcCCEEEEE---ECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCC
Confidence 33444444333 4589999999999999999985444444 55667777776653 35788899988888 6889
Q ss_pred eeEEEeccccccCCc-CCHHHHHHHHHhcccCCeEEEEEeCCC
Q 006633 283 FDMAHCSRCLIPWGQ-YADGLYLIEVDRVLRPGGYWILSGPPV 324 (637)
Q Consensus 283 FDlV~~s~~L~h~~~-~d~~~~L~ei~RvLKPGG~Lvls~pp~ 324 (637)
||+|+++.+++|+.+ ++...++.++.++|||||.++++.+..
T Consensus 115 fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 115 FDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp EEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred ccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 999999999988873 122577999999999999999987633
No 42
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.38 E-value=3.5e-12 Score=124.54 Aligned_cols=107 Identities=17% Similarity=0.197 Sum_probs=86.0
Q ss_pred HHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEecccc--CCCCCCCee
Q 006633 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIR--LPYPSRAFD 284 (637)
Q Consensus 207 ~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~--Lpfpd~sFD 284 (637)
.+.+.++ ....+|||+|||+|.++..+++.+..++.+ |+++.+++.+.++.. .+...+... +++++++||
T Consensus 24 ~l~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~---D~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~fD 95 (230)
T 3cc8_A 24 NLLKHIK---KEWKEVLDIGCSSGALGAAIKENGTRVSGI---EAFPEAAEQAKEKLD--HVVLGDIETMDMPYEEEQFD 95 (230)
T ss_dssp HHHTTCC---TTCSEEEEETCTTSHHHHHHHTTTCEEEEE---ESSHHHHHHHHTTSS--EEEESCTTTCCCCSCTTCEE
T ss_pred HHHHHhc---cCCCcEEEeCCCCCHHHHHHHhcCCeEEEE---eCCHHHHHHHHHhCC--cEEEcchhhcCCCCCCCccC
Confidence 3444444 234599999999999999999887666666 667788888876653 566677665 678889999
Q ss_pred EEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCC
Q 006633 285 MAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPP 323 (637)
Q Consensus 285 lV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp 323 (637)
+|+++.+++|+. +...++.++.++|||||.+++..|.
T Consensus 96 ~v~~~~~l~~~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 96 CVIFGDVLEHLF--DPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp EEEEESCGGGSS--CHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred EEEECChhhhcC--CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 999999998887 7899999999999999999999764
No 43
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.38 E-value=1.6e-12 Score=131.43 Aligned_cols=99 Identities=25% Similarity=0.412 Sum_probs=84.6
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccCCcC
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQY 298 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~~ 298 (637)
..+|||||||+|.++..|++++..++.+ |+++.+++.++++.... +...+...+++++++||+|++..+++|+..
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~~~~v~gv---D~s~~~l~~a~~~~~~~-~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~- 129 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQERGFEVVLV---DPSKEMLEVAREKGVKN-VVEAKAEDLPFPSGAFEAVLALGDVLSYVE- 129 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTTTCEEEEE---ESCHHHHHHHHHHTCSC-EEECCTTSCCSCTTCEEEEEECSSHHHHCS-
T ss_pred CCeEEEeCCCcCHHHHHHHHcCCeEEEE---eCCHHHHHHHHhhcCCC-EEECcHHHCCCCCCCEEEEEEcchhhhccc-
Confidence 4599999999999999999987666666 66778888887775432 777888889999999999999988888876
Q ss_pred CHHHHHHHHHhcccCCeEEEEEeC
Q 006633 299 ADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 299 d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+...+++++.++|||||.+++..+
T Consensus 130 ~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 130 NKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cHHHHHHHHHHHcCCCeEEEEEeC
Confidence 799999999999999999999876
No 44
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.38 E-value=4.2e-12 Score=132.00 Aligned_cols=109 Identities=16% Similarity=0.138 Sum_probs=85.3
Q ss_pred HHHHHHhc-ccCCCCCEEEEECCCCchHHHHHhhc-CCEEEEcCccccHHHHHHHHHH----cCC--CeEEEEeccccCC
Q 006633 206 DDIGKLIN-LKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALE----RGV--PALIGVMASIRLP 277 (637)
Q Consensus 206 ~~L~~lL~-~~~g~~r~VLDIGCGtG~~a~~La~~-~v~~vdisp~Dls~a~i~~A~e----rg~--~~~~~~~d~~~Lp 277 (637)
+.+.+.+. ..+ +.+|||||||+|.++..|+++ +..++.+ |+++.+++.|++ .+. .+.+..+|...+|
T Consensus 106 ~~l~~~l~~~~~--~~~vLDiGcG~G~~~~~la~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 180 (312)
T 3vc1_A 106 EFLMDHLGQAGP--DDTLVDAGCGRGGSMVMAHRRFGSRVEGV---TLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP 180 (312)
T ss_dssp HHHHTTSCCCCT--TCEEEEESCTTSHHHHHHHHHHCCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC
T ss_pred HHHHHHhccCCC--CCEEEEecCCCCHHHHHHHHHcCCEEEEE---eCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC
Confidence 44555554 333 459999999999999999987 6555444 445555555543 343 4889999999999
Q ss_pred CCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 278 YPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 278 fpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+++++||+|++..+++|+ +...++.++.|+|||||++++..+
T Consensus 181 ~~~~~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~~~~~ 222 (312)
T 3vc1_A 181 FDKGAVTASWNNESTMYV---DLHDLFSEHSRFLKVGGRYVTITG 222 (312)
T ss_dssp CCTTCEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCEeEEEECCchhhC---CHHHHHHHHHHHcCCCcEEEEEEc
Confidence 999999999999999776 389999999999999999999864
No 45
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.38 E-value=2.3e-12 Score=131.66 Aligned_cols=113 Identities=16% Similarity=0.163 Sum_probs=85.7
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc-CCEEEEcCccccHHHHHHHHHHc----C--CCeEEEEeccc
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALER----G--VPALIGVMASI 274 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-~v~~vdisp~Dls~a~i~~A~er----g--~~~~~~~~d~~ 274 (637)
...++.+.+.++..++ .+|||||||+|.++..+++. +..++.+ |+++.+++.++++ + ..+.+...|..
T Consensus 50 ~~~~~~~~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~v~gv---d~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 124 (287)
T 1kpg_A 50 IAKIDLALGKLGLQPG--MTLLDVGCGWGATMMRAVEKYDVNVVGL---TLSKNQANHVQQLVANSENLRSKRVLLAGWE 124 (287)
T ss_dssp HHHHHHHHTTTTCCTT--CEEEEETCTTSHHHHHHHHHHCCEEEEE---ESCHHHHHHHHHHHHTCCCCSCEEEEESCGG
T ss_pred HHHHHHHHHHcCCCCc--CEEEEECCcccHHHHHHHHHcCCEEEEE---ECCHHHHHHHHHHHHhcCCCCCeEEEECChh
Confidence 3344555555554444 49999999999999999854 5555555 5556666666544 3 25778888887
Q ss_pred cCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 275 RLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 275 ~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.+| ++||+|++..+++|+..++...+++++.|+|||||.+++..+
T Consensus 125 ~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 125 QFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp GCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred hCC---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 765 789999999999999644889999999999999999999865
No 46
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.37 E-value=3e-12 Score=129.89 Aligned_cols=99 Identities=20% Similarity=0.279 Sum_probs=80.7
Q ss_pred CCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHc----C-CCeEEEEeccccCCCCCCCeeEEEeccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----G-VPALIGVMASIRLPYPSRAFDMAHCSRC 291 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~er----g-~~~~~~~~d~~~Lpfpd~sFDlV~~s~~ 291 (637)
+.+|||||||+|.++..++++ +..++.+ |+++.+++.++++ + .++.+...|...+++++++||+|+++.+
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 114 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNNPDAEITSI---DISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFV 114 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESC
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEech
Confidence 459999999999999999987 4444444 4444555444432 3 3588889999999999999999999999
Q ss_pred cccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 292 LIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 292 L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++|+. +...++.++.++|||||++++..+
T Consensus 115 l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 115 LEHLQ--SPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp GGGCS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhcC--CHHHHHHHHHHHcCCCcEEEEEEc
Confidence 98887 789999999999999999999865
No 47
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.37 E-value=3.1e-12 Score=125.34 Aligned_cols=101 Identities=22% Similarity=0.300 Sum_probs=78.5
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc----CCCeEEEEeccccCCCCCCCeeEEEecccccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLPYPSRAFDMAHCSRCLIP 294 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er----g~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h 294 (637)
..+|||+|||+|.++..+++++..++.+ |+++.+++.|+++ +..+.+...|...+++++++||+|+++.++++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~ 115 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGFEVVGV---DISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVH 115 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCeEEEEeccCCHHHHHHHHcCCEEEEE---ECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHh
Confidence 4599999999999999999885444333 4444555544433 46788889998888888899999999998533
Q ss_pred CCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 295 WGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 295 ~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+...+...++.++.++|||||.+++..+
T Consensus 116 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 116 FEPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp CCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 3322678999999999999999999875
No 48
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.36 E-value=3e-12 Score=129.64 Aligned_cols=113 Identities=18% Similarity=0.173 Sum_probs=86.2
Q ss_pred HHHHHHHHHHhc-ccCCCCCEEEEECCCCchHHHHHhhc-CCEEEEcCccccHHHHHHHHHH----cCC--CeEEEEecc
Q 006633 202 DAYIDDIGKLIN-LKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALE----RGV--PALIGVMAS 273 (637)
Q Consensus 202 ~~~i~~L~~lL~-~~~g~~r~VLDIGCGtG~~a~~La~~-~v~~vdisp~Dls~a~i~~A~e----rg~--~~~~~~~d~ 273 (637)
......+.+.+. ..+ +.+|||||||+|.++..+++. +..++.+ |+++.+++.|++ .+. .+.+...|.
T Consensus 31 ~~~~~~~l~~l~~~~~--~~~vLDiGcG~G~~~~~la~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 105 (267)
T 3kkz_A 31 PEVTLKALSFIDNLTE--KSLIADIGCGTGGQTMVLAGHVTGQVTGL---DFLSGFIDIFNRNARQSGLQNRVTGIVGSM 105 (267)
T ss_dssp HHHHHHHHTTCCCCCT--TCEEEEETCTTCHHHHHHHTTCSSEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEECCT
T ss_pred HHHHHHHHHhcccCCC--CCEEEEeCCCCCHHHHHHHhccCCEEEEE---eCCHHHHHHHHHHHHHcCCCcCcEEEEcCh
Confidence 444555666655 333 459999999999999999987 3244444 444455544443 343 388999999
Q ss_pred ccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 274 IRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 274 ~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
..+|+++++||+|++..+++|+ +...+++++.++|||||++++..+
T Consensus 106 ~~~~~~~~~fD~i~~~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 106 DDLPFRNEELDLIWSEGAIYNI---GFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp TSCCCCTTCEEEEEESSCGGGT---CHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred hhCCCCCCCEEEEEEcCCceec---CHHHHHHHHHHHcCCCCEEEEEEe
Confidence 9999999999999999999777 478999999999999999999875
No 49
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.36 E-value=2.7e-12 Score=128.52 Aligned_cols=111 Identities=17% Similarity=0.208 Sum_probs=85.1
Q ss_pred HHHHHHHHHHhc-ccCCCCCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHH----cCCC--eEEEEe
Q 006633 202 DAYIDDIGKLIN-LKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALE----RGVP--ALIGVM 271 (637)
Q Consensus 202 ~~~i~~L~~lL~-~~~g~~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~e----rg~~--~~~~~~ 271 (637)
......+.+.+. ..+ +.+|||||||+|.++..++++. ++++|+ ++.+++.+++ .+.. +.+...
T Consensus 31 ~~~~~~~l~~l~~~~~--~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~-----s~~~~~~a~~~~~~~~~~~~~~~~~~ 103 (257)
T 3f4k_A 31 PEATRKAVSFINELTD--DAKIADIGCGTGGQTLFLADYVKGQITGIDL-----FPDFIEIFNENAVKANCADRVKGITG 103 (257)
T ss_dssp HHHHHHHHTTSCCCCT--TCEEEEETCTTSHHHHHHHHHCCSEEEEEES-----CHHHHHHHHHHHHHTTCTTTEEEEEC
T ss_pred HHHHHHHHHHHhcCCC--CCeEEEeCCCCCHHHHHHHHhCCCeEEEEEC-----CHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 444555555553 333 3499999999999999999873 455555 4444444433 3433 889999
Q ss_pred ccccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 272 ASIRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 272 d~~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
|...+|+++++||+|++..+++|+ +...+++++.++|||||++++..+
T Consensus 104 d~~~~~~~~~~fD~v~~~~~l~~~---~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 104 SMDNLPFQNEELDLIWSEGAIYNI---GFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp CTTSCSSCTTCEEEEEEESCSCCC---CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred ChhhCCCCCCCEEEEEecChHhhc---CHHHHHHHHHHHcCCCcEEEEEEe
Confidence 999999999999999999999766 478999999999999999999975
No 50
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.35 E-value=1.3e-11 Score=117.07 Aligned_cols=132 Identities=13% Similarity=0.114 Sum_probs=89.4
Q ss_pred cCCeeec-CCCCCCCcccHHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc
Q 006633 184 QGDRFSF-PGGGTMFPRGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER 262 (637)
Q Consensus 184 ~g~~~~F-pg~g~~f~~g~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er 262 (637)
.+..+.| .+.+.+.+...+...+.+.+.+...+ +.+|||+|||+|.++..+++.+..++.+ |+++.+++.++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~vLdiG~G~G~~~~~~~~~~~~v~~~---D~~~~~~~~a~~~ 93 (194)
T 1dus_A 19 RGKKLKFKTDSGVFSYGKVDKGTKILVENVVVDK--DDDILDLGCGYGVIGIALADEVKSTTMA---DINRRAIKLAKEN 93 (194)
T ss_dssp TTEEEEEEEETTSTTTTSCCHHHHHHHHHCCCCT--TCEEEEETCTTSHHHHHHGGGSSEEEEE---ESCHHHHHHHHHH
T ss_pred CCCceEEEeCCCcCCccccchHHHHHHHHcccCC--CCeEEEeCCCCCHHHHHHHHcCCeEEEE---ECCHHHHHHHHHH
Confidence 3444444 22333333333345566777776554 4499999999999999999875444444 4444444444432
Q ss_pred ----CCC---eEEEEeccccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 263 ----GVP---ALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 263 ----g~~---~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+.. +.+...+... ++++++||+|+++..+++... +...+++++.++|||||.+++..+
T Consensus 94 ~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~~~~~~-~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 94 IKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNPPIRAGKE-VLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp HHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECCCSTTCHH-HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHcCCCccceEEEECchhc-ccccCCceEEEECCCcccchh-HHHHHHHHHHHHcCCCCEEEEEEC
Confidence 333 7888877765 455788999999988744233 678999999999999999999975
No 51
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.34 E-value=5.6e-12 Score=122.83 Aligned_cols=107 Identities=22% Similarity=0.241 Sum_probs=84.1
Q ss_pred HHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccC---CCCC-CC
Q 006633 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRL---PYPS-RA 282 (637)
Q Consensus 207 ~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~L---pfpd-~s 282 (637)
.+.+.+....+ .+|||||||+|.++..|++++..++.+ |+++.+++.++++ ....+...+...+ ++.. .+
T Consensus 43 ~~~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~-~~~~~~~~~~~~~~~~~~~~~~~ 116 (227)
T 3e8s_A 43 AILLAILGRQP--ERVLDLGCGEGWLLRALADRGIEAVGV---DGDRTLVDAARAA-GAGEVHLASYAQLAEAKVPVGKD 116 (227)
T ss_dssp HHHHHHHHTCC--SEEEEETCTTCHHHHHHHTTTCEEEEE---ESCHHHHHHHHHT-CSSCEEECCHHHHHTTCSCCCCC
T ss_pred HHHHHhhcCCC--CEEEEeCCCCCHHHHHHHHCCCEEEEE---cCCHHHHHHHHHh-cccccchhhHHhhcccccccCCC
Confidence 34455444443 499999999999999999987666666 7778888888877 4556666666655 5554 45
Q ss_pred eeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 283 FDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 283 FDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
||+|+++.+++ .. +...+++++.++|||||++++..+
T Consensus 117 fD~v~~~~~l~--~~-~~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 117 YDLICANFALL--HQ-DIIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp EEEEEEESCCC--SS-CCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ccEEEECchhh--hh-hHHHHHHHHHHHhCCCeEEEEEec
Confidence 99999999995 33 899999999999999999999976
No 52
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.34 E-value=4.8e-12 Score=124.20 Aligned_cols=101 Identities=24% Similarity=0.301 Sum_probs=84.1
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcC----C------CeEEEEeccccCCCCCCCeeEEEe
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERG----V------PALIGVMASIRLPYPSRAFDMAHC 288 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg----~------~~~~~~~d~~~Lpfpd~sFDlV~~ 288 (637)
+.+|||+|||+|.++..+++++..++.+ |+++.+++.++++. . .+.+...+...+++++++||+|++
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASKGYSVTGI---DINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhCCCeEEEE---ECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 3489999999999999999987666666 66677777776642 2 367888899999999999999999
Q ss_pred ccccccCCcCCHH---HHHHHHHhcccCCeEEEEEeCCC
Q 006633 289 SRCLIPWGQYADG---LYLIEVDRVLRPGGYWILSGPPV 324 (637)
Q Consensus 289 s~~L~h~~~~d~~---~~L~ei~RvLKPGG~Lvls~pp~ 324 (637)
+.+++|+. +.. .+++++.++|||||.+++..+..
T Consensus 108 ~~~l~~~~--~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 108 QAFLTSVP--DPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp ESCGGGCC--CHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred cchhhcCC--CHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 99998887 566 89999999999999999987643
No 53
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.33 E-value=6.9e-12 Score=121.14 Aligned_cols=99 Identities=16% Similarity=0.092 Sum_probs=79.8
Q ss_pred EEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc----CCCeEEEEeccccCCCCCCCeeEEEeccccccCC
Q 006633 221 TAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWG 296 (637)
Q Consensus 221 ~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er----g~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~ 296 (637)
+|||||||+|.++..|++.+..++.+ |+++.+++.++++ +..+.+...|...+++++++||+|+++. .|+.
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~~~~ 106 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAV---DQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIF--CHLP 106 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEE---CSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEEC--CCCC
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEE---ECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEh--hcCC
Confidence 89999999999999999887655555 5556666655543 4578888889888898889999999964 3554
Q ss_pred cCCHHHHHHHHHhcccCCeEEEEEeCCC
Q 006633 297 QYADGLYLIEVDRVLRPGGYWILSGPPV 324 (637)
Q Consensus 297 ~~d~~~~L~ei~RvLKPGG~Lvls~pp~ 324 (637)
.++...++.++.++|||||.+++..+..
T Consensus 107 ~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 107 SSLRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 3378899999999999999999997643
No 54
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.33 E-value=4.2e-12 Score=122.99 Aligned_cols=101 Identities=16% Similarity=0.169 Sum_probs=77.6
Q ss_pred CCEEEEECCCCchH-HHHHhhcCCEEEEcCccccHHHHHHHHHH----cCCCeEEEEeccccCCCCCCCeeEEEeccccc
Q 006633 219 IRTAIDTGCGVASW-GAYLMSRNILAVSFAPRDTHEAQVQFALE----RGVPALIGVMASIRLPYPSRAFDMAHCSRCLI 293 (637)
Q Consensus 219 ~r~VLDIGCGtG~~-a~~La~~~v~~vdisp~Dls~a~i~~A~e----rg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~ 293 (637)
..+|||+|||+|.+ ...++..+..++.+ |+++.+++.+++ .+..+.+...|...+++++++||+|++..+++
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 100 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGYKTYGI---EISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIF 100 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTCEEEEE---ECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGG
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCEEEEE---ECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHH
Confidence 34999999999987 45555555444444 444444444433 34567788889989999899999999999998
Q ss_pred cCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 294 PWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 294 h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
|+..++...++.++.++|||||.+++..+
T Consensus 101 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 129 (209)
T 2p8j_A 101 HMRKNDVKEAIDEIKRVLKPGGLACINFL 129 (209)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 88533788999999999999999999864
No 55
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.32 E-value=6.2e-12 Score=129.68 Aligned_cols=111 Identities=14% Similarity=0.150 Sum_probs=85.4
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhh---cCCEEEEcCccccHHHHHHHHHHc-------CCCeEEEEe
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMS---RNILAVSFAPRDTHEAQVQFALER-------GVPALIGVM 271 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~---~~v~~vdisp~Dls~a~i~~A~er-------g~~~~~~~~ 271 (637)
..+.+.|..+.. ..+.+|||||||+|.++..|++ .+..++++ |+++.+++.|+++ ..++.+.+.
T Consensus 23 ~~~~~~l~~~~~---~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~v~~~~~ 96 (299)
T 3g5t_A 23 SDFYKMIDEYHD---GERKLLVDVGCGPGTATLQMAQELKPFEQIIGS---DLSATMIKTAEVIKEGSPDTYKNVSFKIS 96 (299)
T ss_dssp HHHHHHHHHHCC---SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEE---ESCHHHHHHHHHHHHHCC-CCTTEEEEEC
T ss_pred HHHHHHHHHHhc---CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEE---eCCHHHHHHHHHHHHhccCCCCceEEEEc
Confidence 445555555543 2345999999999999999994 44444444 4555666555543 457899999
Q ss_pred ccccCCCCC------CCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 272 ASIRLPYPS------RAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 272 d~~~Lpfpd------~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+...+++++ ++||+|+++.+++|+ +...++.++.|+|||||.|++..
T Consensus 97 d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 97 SSDDFKFLGADSVDKQKIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp CTTCCGGGCTTTTTSSCEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHHhCCccccccccCCCeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEEEe
Confidence 999988877 899999999999666 68999999999999999999953
No 56
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.32 E-value=7.2e-12 Score=129.34 Aligned_cols=113 Identities=13% Similarity=0.100 Sum_probs=85.3
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc-CCEEEEcCccccHHHHHHHHHHc----CC--CeEEEEeccc
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASI 274 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-~v~~vdisp~Dls~a~i~~A~er----g~--~~~~~~~d~~ 274 (637)
...++.+.+.+...++ .+|||||||+|.++..++++ +..++.+ |+++.+++.|+++ +. .+.+...|..
T Consensus 58 ~~~~~~~~~~~~~~~~--~~vLDiGcG~G~~~~~la~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 132 (302)
T 3hem_A 58 YAKRKLALDKLNLEPG--MTLLDIGCGWGSTMRHAVAEYDVNVIGL---TLSENQYAHDKAMFDEVDSPRRKEVRIQGWE 132 (302)
T ss_dssp HHHHHHHHHTTCCCTT--CEEEEETCTTSHHHHHHHHHHCCEEEEE---ECCHHHHHHHHHHHHHSCCSSCEEEEECCGG
T ss_pred HHHHHHHHHHcCCCCc--CEEEEeeccCcHHHHHHHHhCCCEEEEE---ECCHHHHHHHHHHHHhcCCCCceEEEECCHH
Confidence 3445556666555554 49999999999999999987 6555555 5555666655543 33 4778888877
Q ss_pred cCCCCCCCeeEEEeccccccCCc-------CCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 275 RLPYPSRAFDMAHCSRCLIPWGQ-------YADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 275 ~Lpfpd~sFDlV~~s~~L~h~~~-------~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.+ +++||+|++..+++|+++ ++...+++++.|+|||||.+++..+
T Consensus 133 ~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 184 (302)
T 3hem_A 133 EF---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTI 184 (302)
T ss_dssp GC---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEE
T ss_pred Hc---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 65 789999999999988852 2347999999999999999999864
No 57
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.32 E-value=1.9e-11 Score=126.70 Aligned_cols=98 Identities=16% Similarity=0.070 Sum_probs=76.5
Q ss_pred CCEEEEECCCCchHHHHHhh--c-CCEEEEcCccccHHHHHHHHHHc----CCC--eEEEEeccccCCCCCCCeeEEEec
Q 006633 219 IRTAIDTGCGVASWGAYLMS--R-NILAVSFAPRDTHEAQVQFALER----GVP--ALIGVMASIRLPYPSRAFDMAHCS 289 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~--~-~v~~vdisp~Dls~a~i~~A~er----g~~--~~~~~~d~~~Lpfpd~sFDlV~~s 289 (637)
+.+|||||||+|.++..|+. . +..++.+ |+++.+++.|+++ +.. +.+..+|...++++ ++||+|+++
T Consensus 119 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~ 194 (305)
T 3ocj_A 119 GCVVASVPCGWMSELLALDYSACPGVQLVGI---DYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSN 194 (305)
T ss_dssp TCEEEETTCTTCHHHHTSCCTTCTTCEEEEE---ESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECC
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCCeEEEE---ECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEEC
Confidence 45999999999999999852 2 3344444 4555666666544 222 88999999999988 999999999
Q ss_pred cccccCCcCCHHH---HHHHHHhcccCCeEEEEEeC
Q 006633 290 RCLIPWGQYADGL---YLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 290 ~~L~h~~~~d~~~---~L~ei~RvLKPGG~Lvls~p 322 (637)
.+++|+. +... +++++.++|||||++++...
T Consensus 195 ~~~~~~~--~~~~~~~~l~~~~~~LkpgG~l~i~~~ 228 (305)
T 3ocj_A 195 GLNIYEP--DDARVTELYRRFWQALKPGGALVTSFL 228 (305)
T ss_dssp SSGGGCC--CHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred ChhhhcC--CHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 9998887 4544 79999999999999999863
No 58
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.31 E-value=1.3e-11 Score=121.48 Aligned_cols=94 Identities=21% Similarity=0.273 Sum_probs=80.2
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccCCcC
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQY 298 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~~ 298 (637)
+.+|||||||+|.++..++++ +++|+ ++.+++.++++ .+.+...+...+++++++||+|++..+++|+.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~--~~vD~-----s~~~~~~a~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~-- 116 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK--IGVEP-----SERMAEIARKR--GVFVLKGTAENLPLKDESFDFALMVTTICFVD-- 116 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC--EEEES-----CHHHHHHHHHT--TCEEEECBTTBCCSCTTCEEEEEEESCGGGSS--
T ss_pred CCcEEEeCCCCCHHHHHHHHH--hccCC-----CHHHHHHHHhc--CCEEEEcccccCCCCCCCeeEEEEcchHhhcc--
Confidence 448999999999999999887 55544 56677777776 56777888888999889999999999998876
Q ss_pred CHHHHHHHHHhcccCCeEEEEEeCC
Q 006633 299 ADGLYLIEVDRVLRPGGYWILSGPP 323 (637)
Q Consensus 299 d~~~~L~ei~RvLKPGG~Lvls~pp 323 (637)
+...++.++.++|||||.+++..+.
T Consensus 117 ~~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 117 DPERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHcCCCcEEEEEEeC
Confidence 7999999999999999999998764
No 59
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.31 E-value=6.6e-12 Score=130.46 Aligned_cols=113 Identities=13% Similarity=0.138 Sum_probs=86.5
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc-CCEEEEcCccccHHHHHHHHHHc----CC--CeEEEEeccc
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASI 274 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-~v~~vdisp~Dls~a~i~~A~er----g~--~~~~~~~d~~ 274 (637)
...++.+.+.+...++ .+|||||||+|.++..+++. +..++.+ |+++.+++.|+++ +. .+.+...|..
T Consensus 76 ~~~~~~~~~~~~~~~~--~~vLDiGcG~G~~~~~la~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 150 (318)
T 2fk8_A 76 YAKVDLNLDKLDLKPG--MTLLDIGCGWGTTMRRAVERFDVNVIGL---TLSKNQHARCEQVLASIDTNRSRQVLLQGWE 150 (318)
T ss_dssp HHHHHHHHTTSCCCTT--CEEEEESCTTSHHHHHHHHHHCCEEEEE---ESCHHHHHHHHHHHHTSCCSSCEEEEESCGG
T ss_pred HHHHHHHHHhcCCCCc--CEEEEEcccchHHHHHHHHHCCCEEEEE---ECCHHHHHHHHHHHHhcCCCCceEEEECChH
Confidence 3344555555544443 49999999999999999987 6555555 5566666666544 32 3788888887
Q ss_pred cCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 275 RLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 275 ~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.+| ++||+|++..+++|+..++...++.++.++|||||.+++..+
T Consensus 151 ~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 151 DFA---EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp GCC---CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred HCC---CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 765 789999999999888643789999999999999999999875
No 60
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.31 E-value=1e-11 Score=126.98 Aligned_cols=100 Identities=14% Similarity=0.196 Sum_probs=80.0
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHH----HcCCCeEEEEeccccCCCCCCCeeEEEecccccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFAL----ERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIP 294 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~----erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h 294 (637)
+.+|||+|||+|.++..|++++..++.+ |+++.+++.++ ..+.++.+...|...+++ +++||+|+++.+++|
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~ 196 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGYDVTSW---DHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMF 196 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGG
T ss_pred CCcEEEECCCCCHHHHHHHHCCCeEEEE---ECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhh
Confidence 3489999999999999999986544444 44445554443 335578899999988887 789999999999988
Q ss_pred CCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 295 WGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 295 ~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+..++...++.++.++|||||.+++...
T Consensus 197 ~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 197 LNRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp SCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 8754677999999999999999888653
No 61
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.31 E-value=1.1e-11 Score=127.28 Aligned_cols=113 Identities=19% Similarity=0.232 Sum_probs=86.4
Q ss_pred HHHHHHHHHh-cccCCCCCEEEEECCCCchHHHHHhhc---CCEEEEcCccccHHHHHHHHHHc----CCCeEEEEeccc
Q 006633 203 AYIDDIGKLI-NLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GVPALIGVMASI 274 (637)
Q Consensus 203 ~~i~~L~~lL-~~~~g~~r~VLDIGCGtG~~a~~La~~---~v~~vdisp~Dls~a~i~~A~er----g~~~~~~~~d~~ 274 (637)
.+++.+.+.+ ...+ ..+|||||||+|.++..|++. +..++.+ |+++.+++.|+++ +.++.+.+.|..
T Consensus 8 ~~~~~~~~~~~~~~~--~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~v~~~~~d~~ 82 (284)
T 3gu3_A 8 DYVSFLVNTVWKITK--PVHIVDYGCGYGYLGLVLMPLLPEGSKYTGI---DSGETLLAEARELFRLLPYDSEFLEGDAT 82 (284)
T ss_dssp HHHHHHHHTTSCCCS--CCEEEEETCTTTHHHHHHTTTSCTTCEEEEE---ESCHHHHHHHHHHHHSSSSEEEEEESCTT
T ss_pred HHHHHHHHHHhccCC--CCeEEEecCCCCHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHhcCCceEEEEcchh
Confidence 3444555544 2333 459999999999999999986 3444444 4455555555443 346888999999
Q ss_pred cCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCC
Q 006633 275 RLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPP 323 (637)
Q Consensus 275 ~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp 323 (637)
.++++ ++||+|++..+++|+. +...+++++.|+|||||++++..+.
T Consensus 83 ~~~~~-~~fD~v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 83 EIELN-DKYDIAICHAFLLHMT--TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp TCCCS-SCEEEEEEESCGGGCS--SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred hcCcC-CCeeEEEECChhhcCC--CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 88884 6999999999998886 7999999999999999999999874
No 62
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.30 E-value=8.1e-12 Score=123.29 Aligned_cols=100 Identities=14% Similarity=0.087 Sum_probs=80.9
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEecc-ccccCCc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSR-CLIPWGQ 297 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~-~L~h~~~ 297 (637)
..+|||+|||+|.++..|++++..++.+ |+++.+++.++++...+.+...|...+++ +++||+|+|.. +++|+..
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~~~v~~~---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~ 116 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEFGDTAGL---ELSEDMLTHARKRLPDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKT 116 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHHSEEEEE---ESCHHHHHHHHHHCTTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCS
T ss_pred CCeEEEecccCCHHHHHHHHhCCcEEEE---eCCHHHHHHHHHhCCCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCC
Confidence 4599999999999999999885444444 56677888888776678888889888887 68899999755 7777642
Q ss_pred -CCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 298 -YADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 298 -~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++...+++++.++|||||.+++..+
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (239)
T 3bxo_A 117 TEELGAAVASFAEHLEPGGVVVVEPW 142 (239)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 2567899999999999999999854
No 63
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.30 E-value=2.4e-11 Score=140.24 Aligned_cols=124 Identities=16% Similarity=0.141 Sum_probs=94.8
Q ss_pred CCCcccHHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHc---------
Q 006633 195 TMFPRGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALER--------- 262 (637)
Q Consensus 195 ~~f~~g~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~er--------- 262 (637)
.+.+.-....++.+.+.+...++ .+|||||||+|.++..|++++ ..++++ |+++.+++.|+++
T Consensus 700 tFsPPL~eqRle~LLelL~~~~g--~rVLDVGCGTG~lai~LAr~g~p~a~VtGV---DIS~emLe~AReRLa~~lnAkr 774 (950)
T 3htx_A 700 FFKPPLSKQRVEYALKHIRESSA--STLVDFGCGSGSLLDSLLDYPTSLQTIIGV---DISPKGLARAAKMLHVKLNKEA 774 (950)
T ss_dssp CSSSCHHHHHHHHHHHHHHHSCC--SEEEEETCSSSHHHHHHTSSCCCCCEEEEE---ESCHHHHHHHHHHHHHHTTTTC
T ss_pred cCCchHHHHHHHHHHHHhcccCC--CEEEEECCCCCHHHHHHHHhCCCCCeEEEE---ECCHHHHHHHHHHhhhccchhh
Confidence 33444455566677777765544 499999999999999999885 455555 5566666666541
Q ss_pred -C-CCeEEEEeccccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCCC
Q 006633 263 -G-VPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPPV 324 (637)
Q Consensus 263 -g-~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~ 324 (637)
+ .++.+.++|...+++++++||+|++..+++|+.+.....++.++.|+|||| .++++.|..
T Consensus 775 ~gl~nVefiqGDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 775 CNVKSATLYDGSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp SSCSEEEEEESCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred cCCCceEEEECchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 2 358899999999999999999999999999888423446999999999999 888887654
No 64
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.30 E-value=1.4e-11 Score=132.35 Aligned_cols=99 Identities=20% Similarity=0.144 Sum_probs=81.0
Q ss_pred CCEEEEECCCCchHHHHHhhc---CCEEEEcCccccHHHHHHHHHHc---------C----CCeEEEEeccccC------
Q 006633 219 IRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER---------G----VPALIGVMASIRL------ 276 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~---~v~~vdisp~Dls~a~i~~A~er---------g----~~~~~~~~d~~~L------ 276 (637)
+.+|||||||+|.++..|++. +..++.+ |+++.+++.|+++ + .++.+...+...+
T Consensus 84 ~~~VLDlGcG~G~~~~~la~~~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 84 GATVLDLGCGTGRDVYLASKLVGEHGKVIGV---DMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHTTTCEEEEE---ECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCEEEEecCccCHHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 459999999999999998875 3344444 4555666666554 3 5788999998887
Q ss_pred CCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 277 PYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 277 pfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++++++||+|+++.+++|+. +...+|+++.|+|||||+|++..+
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLST--NKLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcCC--CHHHHHHHHHHHcCCCCEEEEEEe
Confidence 89999999999999997776 799999999999999999999864
No 65
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.29 E-value=1.4e-11 Score=117.48 Aligned_cols=101 Identities=16% Similarity=0.096 Sum_probs=69.9
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc----C-CCeEEEEeccccCC-CCCCCeeEEEecccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----G-VPALIGVMASIRLP-YPSRAFDMAHCSRCL 292 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er----g-~~~~~~~~d~~~Lp-fpd~sFDlV~~s~~L 292 (637)
+.+|||+|||+|.++..|++++..++.+ |+++.+++.|+++ + .++.+...+...++ +.+++||+|+++...
T Consensus 23 ~~~vLDiGcG~G~~~~~la~~~~~v~~v---D~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 23 ESIVVDATMGNGNDTAFLAGLSKKVYAF---DVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp TCEEEESCCTTSHHHHHHHTTSSEEEEE---ESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCEEEEE---ECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 4599999999999999999885444444 4444555544432 3 35777776666643 557889999987433
Q ss_pred ccC-------CcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 293 IPW-------GQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 293 ~h~-------~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.+. ..++...++.++.|+|||||.+++...
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 232 111456789999999999999999864
No 66
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.29 E-value=6.2e-12 Score=121.69 Aligned_cols=101 Identities=24% Similarity=0.204 Sum_probs=79.5
Q ss_pred CCEEEEECCCCchHHHHHhhcCC-EEEEcCccccHHHHHHHHHHcC---CCeEEEEeccccCCCCCCCeeEEEecccccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERG---VPALIGVMASIRLPYPSRAFDMAHCSRCLIP 294 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v-~~vdisp~Dls~a~i~~A~erg---~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h 294 (637)
..+|||+|||+|.++..+++.+. .++.+ |+++.+++.++++. ..+.+...|...+++++++||+|++..++++
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~~---D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFPNVTSV---DYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCCCEEEE---ESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred CCeEEEECCCCcHHHHHHHHcCCCcEEEE---eCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 34899999999999999998753 33333 45566666666553 3578888898888998999999999888755
Q ss_pred CC-------------cCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 295 WG-------------QYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 295 ~~-------------~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+. .++...++.++.|+|||||.+++..+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 43 11567899999999999999999976
No 67
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.28 E-value=5.4e-12 Score=129.98 Aligned_cols=100 Identities=11% Similarity=0.010 Sum_probs=69.8
Q ss_pred CCCEEEEECCCCchHHHH----Hhhc--CCE--EEEcCccccHHHHHHHHHHc-----CC-Ce--EEEEeccccCC----
Q 006633 218 SIRTAIDTGCGVASWGAY----LMSR--NIL--AVSFAPRDTHEAQVQFALER-----GV-PA--LIGVMASIRLP---- 277 (637)
Q Consensus 218 ~~r~VLDIGCGtG~~a~~----La~~--~v~--~vdisp~Dls~a~i~~A~er-----g~-~~--~~~~~d~~~Lp---- 277 (637)
.+.+|||||||+|.++.. ++.+ ++. ++.+ |.++.|++.|+++ ++ ++ .+...+...++
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~v---D~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVV---EPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEE---CSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEE---eCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhc
Confidence 345899999999976543 3332 442 1333 4455555555443 22 23 33444444443
Q ss_pred --CCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 278 --YPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 278 --fpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+++++||+|+++.+++|+. |+..+|+++.|+|||||+|++..+
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~ 173 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVK--DIPATLKFFHSLLGTNAKMLIIVV 173 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccCCCceeEEEEeeeeeecC--CHHHHHHHHHHHcCCCcEEEEEEe
Confidence 6789999999999997777 899999999999999999999854
No 68
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.27 E-value=2.2e-11 Score=118.26 Aligned_cols=148 Identities=15% Similarity=0.049 Sum_probs=94.0
Q ss_pred CcccHHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHH----cCCC-eEE
Q 006633 197 FPRGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALE----RGVP-ALI 268 (637)
Q Consensus 197 f~~g~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~e----rg~~-~~~ 268 (637)
|..+.......+.+.+......+.+|||+|||+|.++..+++.+ ++++|+ ++.+++.|++ .+.. +.+
T Consensus 39 f~~~~~~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~-----s~~~~~~a~~~~~~~~~~~v~~ 113 (205)
T 3grz_A 39 FGTGNHQTTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLGAKSVLATDI-----SDESMTAAEENAALNGIYDIAL 113 (205)
T ss_dssp ---CCHHHHHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEES-----CHHHHHHHHHHHHHTTCCCCEE
T ss_pred cCCCCCccHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEEC-----CHHHHHHHHHHHHHcCCCceEE
Confidence 44444444555555554222234599999999999999998873 445555 4445544443 2443 777
Q ss_pred EEeccccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHH
Q 006633 269 GVMASIRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIE 348 (637)
Q Consensus 269 ~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie 348 (637)
...|... +.+++||+|+++..++ ....+++++.++|||||++++++.... ..+.+.
T Consensus 114 ~~~d~~~--~~~~~fD~i~~~~~~~-----~~~~~l~~~~~~L~~gG~l~~~~~~~~-----------------~~~~~~ 169 (205)
T 3grz_A 114 QKTSLLA--DVDGKFDLIVANILAE-----ILLDLIPQLDSHLNEDGQVIFSGIDYL-----------------QLPKIE 169 (205)
T ss_dssp EESSTTT--TCCSCEEEEEEESCHH-----HHHHHGGGSGGGEEEEEEEEEEEEEGG-----------------GHHHHH
T ss_pred Eeccccc--cCCCCceEEEECCcHH-----HHHHHHHHHHHhcCCCCEEEEEecCcc-----------------cHHHHH
Confidence 7777654 4568999999987663 346789999999999999999754110 133466
Q ss_pred HHHHHhceeeecc--cCc--EEEEeccCC
Q 006633 349 TIARSLCWKKLIQ--KKD--LAIWQKPTN 373 (637)
Q Consensus 349 ~la~~l~w~~v~~--~~~--~aIWqKP~~ 373 (637)
.+.+..+|+.+.. .++ ..+.++|.+
T Consensus 170 ~~~~~~Gf~~~~~~~~~~w~~~~~~~~~~ 198 (205)
T 3grz_A 170 QALAENSFQIDLKMRAGRWIGLAISRKHE 198 (205)
T ss_dssp HHHHHTTEEEEEEEEETTEEEEEEEECC-
T ss_pred HHHHHcCCceEEeeccCCEEEEEEecccc
Confidence 6777788876642 222 345555554
No 69
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.27 E-value=2e-11 Score=117.25 Aligned_cols=121 Identities=14% Similarity=0.081 Sum_probs=84.0
Q ss_pred cHHHHHHHHHHHhccc-CCCCCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHcC-CCeEEEEeccc
Q 006633 200 GADAYIDDIGKLINLK-DGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALERG-VPALIGVMASI 274 (637)
Q Consensus 200 g~~~~i~~L~~lL~~~-~g~~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~erg-~~~~~~~~d~~ 274 (637)
..+...+.+.+.+... ...+.+|||+|||+|.++..+++++ ++++|+++..+..+..+.. ..+ .++.+..+|..
T Consensus 25 ~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v~~~~~d~~ 103 (189)
T 3p9n_A 25 TTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIE-ALGLSGATLRRGAVA 103 (189)
T ss_dssp -CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHH-HHTCSCEEEEESCHH
T ss_pred CcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHH-HcCCCceEEEEccHH
Confidence 3455556666665431 1234599999999999999888763 5666665544433333222 223 36888888877
Q ss_pred cCC--CCCCCeeEEEeccccccCCcCCHHHHHHHHHh--cccCCeEEEEEeC
Q 006633 275 RLP--YPSRAFDMAHCSRCLIPWGQYADGLYLIEVDR--VLRPGGYWILSGP 322 (637)
Q Consensus 275 ~Lp--fpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~R--vLKPGG~Lvls~p 322 (637)
.++ +++++||+|+++..+++..+ +...++.++.+ +|||||.+++..+
T Consensus 104 ~~~~~~~~~~fD~i~~~~p~~~~~~-~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 104 AVVAAGTTSPVDLVLADPPYNVDSA-DVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp HHHHHCCSSCCSEEEECCCTTSCHH-HHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred HHHhhccCCCccEEEECCCCCcchh-hHHHHHHHHHhcCccCCCeEEEEEec
Confidence 654 45789999999987744433 78899999999 9999999999865
No 70
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.27 E-value=2.9e-11 Score=118.02 Aligned_cols=120 Identities=19% Similarity=0.231 Sum_probs=91.1
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccCCcC
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQY 298 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~~ 298 (637)
..+|||||||+|.++..++ ..++++|+++. .+.+...+...+|+++++||+|++..++ |+.
T Consensus 68 ~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l-~~~-- 128 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIR-NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCLSL-MGT-- 128 (215)
T ss_dssp TSCEEEETCTTCHHHHHCC-SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEESCC-CSS--
T ss_pred CCeEEEECCcCCHHHHHhh-ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEehhc-ccc--
Confidence 3489999999999998884 57888888764 3456677888889999999999999999 553
Q ss_pred CHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHhceeeecccC-----cEEEEeccC
Q 006633 299 ADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLIQKK-----DLAIWQKPT 372 (637)
Q Consensus 299 d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w~~v~~~~-----~~aIWqKP~ 372 (637)
+...++.++.++|||||.+++..+... . . ..+.+..+.+..+|+.+.... .+.+++|..
T Consensus 129 ~~~~~l~~~~~~L~~gG~l~i~~~~~~----~----~-------~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~k~~ 192 (215)
T 2zfu_A 129 NIRDFLEEANRVLKPGGLLKVAEVSSR----F----E-------DVRTFLRAVTKLGFKIVSKDLTNSHFFLFDFQKTG 192 (215)
T ss_dssp CHHHHHHHHHHHEEEEEEEEEEECGGG----C----S-------CHHHHHHHHHHTTEEEEEEECCSTTCEEEEEEECS
T ss_pred CHHHHHHHHHHhCCCCeEEEEEEcCCC----C----C-------CHHHHHHHHHHCCCEEEEEecCCCeEEEEEEEecC
Confidence 899999999999999999999865211 0 0 234566778888887765322 246666654
No 71
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.26 E-value=1.1e-11 Score=127.24 Aligned_cols=112 Identities=13% Similarity=0.006 Sum_probs=83.6
Q ss_pred HHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCC-----
Q 006633 204 YIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPY----- 278 (637)
Q Consensus 204 ~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpf----- 278 (637)
.++.+.+.++..++. +|||||||+|.++..|++++..++.+ |+++.+++.|+++.... +...+...++.
T Consensus 33 ~~~~il~~l~l~~g~--~VLDlGcGtG~~a~~La~~g~~V~gv---D~S~~ml~~Ar~~~~~~-~v~~~~~~~~~~~~~~ 106 (261)
T 3iv6_A 33 DRENDIFLENIVPGS--TVAVIGASTRFLIEKALERGASVTVF---DFSQRMCDDLAEALADR-CVTIDLLDITAEIPKE 106 (261)
T ss_dssp HHHHHHHTTTCCTTC--EEEEECTTCHHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHTSSS-CCEEEECCTTSCCCGG
T ss_pred HHHHHHHhcCCCCcC--EEEEEeCcchHHHHHHHhcCCEEEEE---ECCHHHHHHHHHHHHhc-cceeeeeecccccccc
Confidence 345566666655544 99999999999999999997666666 67778888887764322 22233333332
Q ss_pred CCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 279 PSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 279 pd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.+++||+|+++.+++|+..++...++.++.++| |||.++++.+
T Consensus 107 ~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 107 LAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp GTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred cCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 257899999999998887546778999999999 9999999865
No 72
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.25 E-value=8.8e-12 Score=124.13 Aligned_cols=115 Identities=14% Similarity=0.128 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCC-EEEEcCccccHHHHHHHHHHc----CCCeEEEEecccc
Q 006633 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALER----GVPALIGVMASIR 275 (637)
Q Consensus 201 ~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v-~~vdisp~Dls~a~i~~A~er----g~~~~~~~~d~~~ 275 (637)
...+++.+...+. . .+.+|||||||+|.++..|++.+. .++.+ |+++.+++.|+++ +.++.+..++...
T Consensus 46 ~~~~~~~l~~~~~-~--~~~~vLDiGcGtG~~~~~l~~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~v~~~~~d~~~ 119 (236)
T 1zx0_A 46 ETPYMHALAAAAS-S--KGGRVLEVGFGMAIAASKVQEAPIDEHWII---ECNDGVFQRLRDWAPRQTHKVIPLKGLWED 119 (236)
T ss_dssp GHHHHHHHHHHHT-T--TCEEEEEECCTTSHHHHHHHTSCEEEEEEE---ECCHHHHHHHHHHGGGCSSEEEEEESCHHH
T ss_pred HHHHHHHHHhhcC-C--CCCeEEEEeccCCHHHHHHHhcCCCeEEEE---cCCHHHHHHHHHHHHhcCCCeEEEecCHHH
Confidence 3445555655542 2 244899999999999999987643 33333 5566666666654 3557888888888
Q ss_pred C--CCCCCCeeEEEe-cccc--ccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 276 L--PYPSRAFDMAHC-SRCL--IPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 276 L--pfpd~sFDlV~~-s~~L--~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+ ++++++||+|++ ...+ ..+...+...++.++.|+|||||+|++..
T Consensus 120 ~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 170 (236)
T 1zx0_A 120 VAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp HGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred hhcccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 8 899999999999 5543 11111144578999999999999999874
No 73
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.23 E-value=1.8e-11 Score=127.76 Aligned_cols=99 Identities=8% Similarity=-0.019 Sum_probs=69.5
Q ss_pred CCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHc----CCC-------eEEEEecc------ccC--
Q 006633 219 IRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALER----GVP-------ALIGVMAS------IRL-- 276 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~er----g~~-------~~~~~~d~------~~L-- 276 (637)
+.+|||||||+|..+..++..+ ++++|+ ++.+++.|+++ +.. +.+.+.+. ..+
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~-----S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~ 123 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIALLVATDP-----DADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVRE 123 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCSEEEEEES-----CHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHT
T ss_pred CCeEEEEecCCcHhHHHHHhcCCCeEEEEEC-----CHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhc
Confidence 4589999999997666555543 455555 44555554433 221 44556555 323
Q ss_pred CCCCCCeeEEEeccccccC-CcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 277 PYPSRAFDMAHCSRCLIPW-GQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 277 pfpd~sFDlV~~s~~L~h~-~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++++++||+|+|..++++. ..++...+++++.|+|||||+|+++.+
T Consensus 124 ~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 124 VFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp TCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 4677899999999998553 322678999999999999999999876
No 74
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.23 E-value=3.9e-11 Score=119.86 Aligned_cols=100 Identities=21% Similarity=0.316 Sum_probs=76.6
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHH----cCCCeEEEEeccccCCCCCCCeeEEEeccc-cc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALE----RGVPALIGVMASIRLPYPSRAFDMAHCSRC-LI 293 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~e----rg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~-L~ 293 (637)
+.+|||+|||+|.++..|++++..++.+ |+++.+++.|++ .+..+.+...|...++++ ++||+|+|... ++
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~ 117 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAERGYEVVGL---DLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIM 117 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGG
T ss_pred CCEEEEeCCCCCHHHHHHHHCCCeEEEE---ECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchh
Confidence 4599999999999999999986555554 555555555543 355788888998888865 68999998744 33
Q ss_pred cCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 294 PWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 294 h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++..++...++.++.++|||||.+++..+
T Consensus 118 ~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 118 YFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp GSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 44332677899999999999999999765
No 75
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.23 E-value=1.1e-11 Score=127.14 Aligned_cols=152 Identities=16% Similarity=0.053 Sum_probs=89.8
Q ss_pred HHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc-CCEEEEcCccccHHHHHHHHHHcCC-----------------
Q 006633 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALERGV----------------- 264 (637)
Q Consensus 203 ~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-~v~~vdisp~Dls~a~i~~A~erg~----------------- 264 (637)
..++.+.+.+......+.+|||||||+|.+...++.. +..++++ |+++.+++.|+++..
T Consensus 56 ~~~~~l~~~l~~~~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~ 132 (289)
T 2g72_A 56 WKLRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMT---DFLEVNRQELGRWLQEEPGAFNWSMYSQHACL 132 (289)
T ss_dssp HHHHHHHHHHHTSCSCCSEEEEETCTTCCGGGTTGGGGCSEEEEE---CSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCeEEEECCCcChHHHHhhccCCCeEEEe---CCCHHHHHHHHHHHhhCcccccchhhhhHHHH
Confidence 3345566665433224569999999999955444432 3344444 445555555443100
Q ss_pred ------------------CeEEEEecccc-CCC-----CCCCeeEEEeccccccCCcC--CHHHHHHHHHhcccCCeEEE
Q 006633 265 ------------------PALIGVMASIR-LPY-----PSRAFDMAHCSRCLIPWGQY--ADGLYLIEVDRVLRPGGYWI 318 (637)
Q Consensus 265 ------------------~~~~~~~d~~~-Lpf-----pd~sFDlV~~s~~L~h~~~~--d~~~~L~ei~RvLKPGG~Lv 318 (637)
...+..+|... +|+ ++++||+|+|+.+++|+..+ +...+|.++.|+|||||+|+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~ 212 (289)
T 2g72_A 133 IEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLL 212 (289)
T ss_dssp HHCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred hcCcccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 03455567766 664 45679999999999774432 68899999999999999999
Q ss_pred EEeCC-CCccccccCCCCchhhhHHhHhhHHHHHHHhceeeec
Q 006633 319 LSGPP-VNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 360 (637)
Q Consensus 319 ls~pp-~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w~~v~ 360 (637)
+.... ..|..... ..........+.+..+.+..+|+.+.
T Consensus 213 ~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~aGf~~~~ 252 (289)
T 2g72_A 213 LIGALEESWYLAGE---ARLTVVPVSEEEVREALVRSGYKVRD 252 (289)
T ss_dssp EEEEESCCEEEETT---EEEECCCCCHHHHHHHHHHTTEEEEE
T ss_pred EEEecCcceEEcCC---eeeeeccCCHHHHHHHHHHcCCeEEE
Confidence 98521 11111000 00000011234566777788886654
No 76
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.23 E-value=1.6e-11 Score=126.64 Aligned_cols=114 Identities=11% Similarity=0.039 Sum_probs=82.9
Q ss_pred HHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc----C----CCeEEEEeccc
Q 006633 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----G----VPALIGVMASI 274 (637)
Q Consensus 203 ~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er----g----~~~~~~~~d~~ 274 (637)
.....+.+.+...+ .+|||||||+|.++..|++++..++.+ |+++.+++.|+++ + .++.+..+|..
T Consensus 70 ~~~~~~~~~~~~~~---~~vLDlGcG~G~~~~~l~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 70 SEAREFATRTGPVS---GPVLELAAGMGRLTFPFLDLGWEVTAL---ELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS 143 (299)
T ss_dssp HHHHHHHHHHCCCC---SCEEEETCTTTTTHHHHHTTTCCEEEE---ESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT
T ss_pred HHHHHHHHhhCCCC---CcEEEEeccCCHHHHHHHHcCCeEEEE---ECCHHHHHHHHHHHhhcccccccceEEEeCchh
Confidence 34455555554332 379999999999999999985444444 4455555555543 2 45889999999
Q ss_pred cCCCCCCCeeEEEeccccccCCc-CCHHHHHHHHHhcccCCeEEEEEeCC
Q 006633 275 RLPYPSRAFDMAHCSRCLIPWGQ-YADGLYLIEVDRVLRPGGYWILSGPP 323 (637)
Q Consensus 275 ~Lpfpd~sFDlV~~s~~L~h~~~-~d~~~~L~ei~RvLKPGG~Lvls~pp 323 (637)
.+++ +++||+|+|+..+.|+.+ ++...+|+++.++|||||.|++..+.
T Consensus 144 ~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 144 AFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAM 192 (299)
T ss_dssp BCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeec
Confidence 9887 689999997644445442 24689999999999999999999763
No 77
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.22 E-value=1.1e-11 Score=124.41 Aligned_cols=109 Identities=13% Similarity=0.071 Sum_probs=78.6
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHc----CCCeEEEEeccc
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALER----GVPALIGVMASI 274 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~er----g~~~~~~~~d~~ 274 (637)
..+.+.+.+.+.. .+.+|||||||+|..+.+++++. ++++++ ++.+++.|+++ +....+...+..
T Consensus 47 ~~~m~~~a~~~~~---~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~-----~~~~~~~a~~~~~~~~~~~~~~~~~a~ 118 (236)
T 3orh_A 47 TPYMHALAAAASS---KGGRVLEVGFGMAIAASKVQEAPIDEHWIIEC-----NDGVFQRLRDWAPRQTHKVIPLKGLWE 118 (236)
T ss_dssp HHHHHHHHHHHTT---TCEEEEEECCTTSHHHHHHTTSCEEEEEEEEC-----CHHHHHHHHHHGGGCSSEEEEEESCHH
T ss_pred HHHHHHHHHhhcc---CCCeEEEECCCccHHHHHHHHhCCcEEEEEeC-----CHHHHHHHHHHHhhCCCceEEEeehHH
Confidence 4455666666542 24589999999999999998873 455555 55566666543 445666666654
Q ss_pred cC--CCCCCCeeEEEe-----ccccccCCcCCHHHHHHHHHhcccCCeEEEEE
Q 006633 275 RL--PYPSRAFDMAHC-----SRCLIPWGQYADGLYLIEVDRVLRPGGYWILS 320 (637)
Q Consensus 275 ~L--pfpd~sFDlV~~-----s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls 320 (637)
.+ ++++++||.|++ ...+.|+. +...++.++.|+|||||.|++.
T Consensus 119 ~~~~~~~~~~FD~i~~D~~~~~~~~~~~~--~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 119 DVAPTLPDGHFDGILYDTYPLSEETWHTH--QFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp HHGGGSCTTCEEEEEECCCCCBGGGTTTH--HHHHHHHTHHHHEEEEEEEEEC
T ss_pred hhcccccccCCceEEEeeeecccchhhhc--chhhhhhhhhheeCCCCEEEEE
Confidence 43 578999999985 34444555 7889999999999999999885
No 78
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.22 E-value=1.1e-11 Score=128.20 Aligned_cols=102 Identities=18% Similarity=0.185 Sum_probs=76.9
Q ss_pred CCCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHcC--------------------------------
Q 006633 218 SIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERG-------------------------------- 263 (637)
Q Consensus 218 ~~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~erg-------------------------------- 263 (637)
.+.+|||||||+|.++..|+++ +..++++ |+++.+++.|+++.
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gv---Dis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGL---DIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRK 122 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEE---ESCHHHHHHHHHTC--------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEE---CCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccc
Confidence 3559999999999999999987 4444444 55566666665541
Q ss_pred -------------------------------CCeEEEEeccccCC-----CCCCCeeEEEeccccccC----CcCCHHHH
Q 006633 264 -------------------------------VPALIGVMASIRLP-----YPSRAFDMAHCSRCLIPW----GQYADGLY 303 (637)
Q Consensus 264 -------------------------------~~~~~~~~d~~~Lp-----fpd~sFDlV~~s~~L~h~----~~~d~~~~ 303 (637)
.++.+..+|....+ +.+++||+|+|..+++|+ ..++...+
T Consensus 123 ~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~ 202 (292)
T 3g07_A 123 RSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRM 202 (292)
T ss_dssp -------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHH
Confidence 24777777765443 678899999999998555 22257789
Q ss_pred HHHHHhcccCCeEEEEEeC
Q 006633 304 LIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 304 L~ei~RvLKPGG~Lvls~p 322 (637)
++++.++|||||+|++...
T Consensus 203 l~~~~~~LkpGG~lil~~~ 221 (292)
T 3g07_A 203 FRRIYRHLRPGGILVLEPQ 221 (292)
T ss_dssp HHHHHHHEEEEEEEEEECC
T ss_pred HHHHHHHhCCCcEEEEecC
Confidence 9999999999999999854
No 79
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.22 E-value=3.2e-11 Score=130.04 Aligned_cols=118 Identities=14% Similarity=0.072 Sum_probs=85.0
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHH----cCCCeEEEEeccccCC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALE----RGVPALIGVMASIRLP 277 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~e----rg~~~~~~~~d~~~Lp 277 (637)
+..++.+.+.+......+.+|||+|||+|.++..+++++..++.+ |+++.+++.|++ .+..+.+...|....+
T Consensus 217 ~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~~V~gv---Dis~~al~~A~~n~~~~~~~v~~~~~D~~~~~ 293 (381)
T 3dmg_A 217 LLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGAEVVGV---EDDLASVLSLQKGLEANALKAQALHSDVDEAL 293 (381)
T ss_dssp HHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTCEEEEE---ESBHHHHHHHHHHHHHTTCCCEEEECSTTTTS
T ss_pred HHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCCEEEEE---ECCHHHHHHHHHHHHHcCCCeEEEEcchhhcc
Confidence 334444444432122234599999999999999999986544444 445555554443 4556888889988887
Q ss_pred CCCCCeeEEEeccccccC---CcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 278 YPSRAFDMAHCSRCLIPW---GQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 278 fpd~sFDlV~~s~~L~h~---~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.++++||+|+++..+++. ..++...++.++.++|||||.++++.+
T Consensus 294 ~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n 341 (381)
T 3dmg_A 294 TEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSN 341 (381)
T ss_dssp CTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEc
Confidence 777899999999888551 111677899999999999999999875
No 80
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.21 E-value=3e-11 Score=123.17 Aligned_cols=101 Identities=21% Similarity=0.224 Sum_probs=77.6
Q ss_pred CCEEEEECCCCchHHHHHhhcCC-EEEEcCccccHHHHHHHHHHc----CC--CeEEEEeccccCCC-CCCCeeEEEecc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRLPY-PSRAFDMAHCSR 290 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v-~~vdisp~Dls~a~i~~A~er----g~--~~~~~~~d~~~Lpf-pd~sFDlV~~s~ 290 (637)
+.+|||||||+|.++..+++.+. .++.+ |+++.+++.|+++ +. .+.+..+|...+++ ++++||+|++..
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERAGIGEYYGV---DIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHHTCSEEEEE---ESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCeEEEECCCCCHHHHHHHHCCCCEEEEE---ECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 44999999999999998887643 44444 4455555555543 22 46888889888888 688999999999
Q ss_pred ccccC--CcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 291 CLIPW--GQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 291 ~L~h~--~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+++|. ..++...++.++.++|||||.+++..+
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 98662 222678999999999999999999976
No 81
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.20 E-value=1.7e-11 Score=122.77 Aligned_cols=148 Identities=12% Similarity=0.065 Sum_probs=93.3
Q ss_pred HHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCC-EEEEcCccccHHHHHHHHHHcC--CC------------------
Q 006633 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERG--VP------------------ 265 (637)
Q Consensus 207 ~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v-~~vdisp~Dls~a~i~~A~erg--~~------------------ 265 (637)
.+..++......+.+|||||||+|.++..+++.+. .++.+ |+++.+++.++++. .+
T Consensus 45 ~l~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (265)
T 2i62_A 45 NLFKIFCLGAVKGELLIDIGSGPTIYQLLSACESFTEIIVS---DYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGN 121 (265)
T ss_dssp HHHHHHHSSSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEE---ESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTT
T ss_pred HHHHHhcccccCCCEEEEECCCccHHHHHHhhcccCeEEEe---cCCHHHHHHHHHHHhcCCccccchhhhhhhhccccc
Confidence 33344443223456899999999999999888754 34444 55555665554431 11
Q ss_pred --------------e-EEEEeccccCC-CCC---CCeeEEEeccccccCCcC--CHHHHHHHHHhcccCCeEEEEEeCCC
Q 006633 266 --------------A-LIGVMASIRLP-YPS---RAFDMAHCSRCLIPWGQY--ADGLYLIEVDRVLRPGGYWILSGPPV 324 (637)
Q Consensus 266 --------------~-~~~~~d~~~Lp-fpd---~sFDlV~~s~~L~h~~~~--d~~~~L~ei~RvLKPGG~Lvls~pp~ 324 (637)
+ .+..+|...++ +++ ++||+|+++.++++.... +...++.++.|+|||||+|++.....
T Consensus 122 ~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 201 (265)
T 2i62_A 122 RMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALK 201 (265)
T ss_dssp CSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESS
T ss_pred ccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCC
Confidence 5 77888877654 355 899999999999744332 67899999999999999999987422
Q ss_pred C-ccccccCCCCchhhhHHhHhhHHHHHHHhceeeec
Q 006633 325 N-WESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 360 (637)
Q Consensus 325 ~-w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w~~v~ 360 (637)
. +.... ...........+.+..+.+..+|+.+.
T Consensus 202 ~~~~~~~---~~~~~~~~~~~~~~~~~l~~aGf~~~~ 235 (265)
T 2i62_A 202 SSYYMIG---EQKFSSLPLGWETVRDAVEEAGYTIEQ 235 (265)
T ss_dssp CCEEEET---TEEEECCCCCHHHHHHHHHHTTCEEEE
T ss_pred CceEEcC---CccccccccCHHHHHHHHHHCCCEEEE
Confidence 1 10000 000000011123566777788886654
No 82
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.20 E-value=4.4e-10 Score=109.00 Aligned_cols=108 Identities=16% Similarity=-0.010 Sum_probs=78.1
Q ss_pred HHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC----CEEEEcCccccHHHHHHHHHHc----C-CCeEEEEecc
Q 006633 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN----ILAVSFAPRDTHEAQVQFALER----G-VPALIGVMAS 273 (637)
Q Consensus 203 ~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~----v~~vdisp~Dls~a~i~~A~er----g-~~~~~~~~d~ 273 (637)
.....+.+.+...++. +|||+|||+|.++..+++.+ ++++|++ +.+++.|+++ + ..+.+...+.
T Consensus 27 ~i~~~~l~~l~~~~~~--~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s-----~~~~~~a~~~~~~~~~~~v~~~~~d~ 99 (204)
T 3e05_A 27 EVRAVTLSKLRLQDDL--VMWDIGAGSASVSIEASNLMPNGRIFALERN-----PQYLGFIRDNLKKFVARNVTLVEAFA 99 (204)
T ss_dssp HHHHHHHHHTTCCTTC--EEEEETCTTCHHHHHHHHHCTTSEEEEEECC-----HHHHHHHHHHHHHHTCTTEEEEECCT
T ss_pred HHHHHHHHHcCCCCCC--EEEEECCCCCHHHHHHHHHCCCCEEEEEeCC-----HHHHHHHHHHHHHhCCCcEEEEeCCh
Confidence 3334555666555544 99999999999999999874 4555554 4444444332 3 3577888887
Q ss_pred ccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 274 IRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 274 ~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.......++||+|++...+. +...+++++.++|||||.+++..+
T Consensus 100 ~~~~~~~~~~D~i~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 100 PEGLDDLPDPDRVFIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp TTTCTTSCCCSEEEESCCTT-----CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred hhhhhcCCCCCEEEECCCCc-----CHHHHHHHHHHhcCCCeEEEEEec
Confidence 55444447899999987662 678899999999999999999865
No 83
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.20 E-value=2.1e-11 Score=121.51 Aligned_cols=101 Identities=11% Similarity=0.018 Sum_probs=79.2
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcC--CCeEEEEeccccCCCCC-----CCeeEEEeccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERG--VPALIGVMASIRLPYPS-----RAFDMAHCSRC 291 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg--~~~~~~~~d~~~Lpfpd-----~sFDlV~~s~~ 291 (637)
+.+|||||||+|.++..|++.+..++.+ |+++.+++.++++. .++.+...|...+++.. ..||+|+++.+
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~~v~gv---D~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~ 133 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFPRVIGL---DVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTG 133 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSSCEEEE---ESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESS
T ss_pred CCeEEEEcCCCCHHHHHHHHhCCCEEEE---ECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcch
Confidence 4589999999999999999885434444 55666777776654 36788888877765432 34999999999
Q ss_pred cccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 292 LIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 292 L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++|+..++...++.++.++|||||++++..+
T Consensus 134 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 164 (245)
T 3ggd_A 134 FHHIPVEKRELLGQSLRILLGKQGAMYLIEL 164 (245)
T ss_dssp STTSCGGGHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 9888765788999999999999999988864
No 84
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.20 E-value=6.8e-11 Score=116.92 Aligned_cols=112 Identities=17% Similarity=0.166 Sum_probs=83.0
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHH----cCCCeEEEEeccccCC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALE----RGVPALIGVMASIRLP 277 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~e----rg~~~~~~~~d~~~Lp 277 (637)
..+.+.+.+.++ ++ .+|||+|||+|.++..+++. ..++.+ |+++.+++.|++ .+..+.+...+...++
T Consensus 21 ~~~~~~~~~~~~--~~--~~vLdiG~G~G~~~~~l~~~-~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~ 92 (243)
T 3d2l_A 21 PEWVAWVLEQVE--PG--KRIADIGCGTGTATLLLADH-YEVTGV---DLSEEMLEIAQEKAMETNRHVDFWVQDMRELE 92 (243)
T ss_dssp HHHHHHHHHHSC--TT--CEEEEESCTTCHHHHHHTTT-SEEEEE---ESCHHHHHHHHHHHHHTTCCCEEEECCGGGCC
T ss_pred HHHHHHHHHHcC--CC--CeEEEecCCCCHHHHHHhhC-CeEEEE---ECCHHHHHHHHHhhhhcCCceEEEEcChhhcC
Confidence 445555665553 22 48999999999999999887 444433 444455554443 3456888888988888
Q ss_pred CCCCCeeEEEecc-ccccCCc-CCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 278 YPSRAFDMAHCSR-CLIPWGQ-YADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 278 fpd~sFDlV~~s~-~L~h~~~-~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++ ++||+|++.. +++|+.. ++...+++++.++|||||.+++..+
T Consensus 93 ~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 93 LP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp CS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 76 8899999986 8877732 1677899999999999999999865
No 85
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.19 E-value=9.7e-12 Score=126.39 Aligned_cols=117 Identities=16% Similarity=0.079 Sum_probs=76.4
Q ss_pred HHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHc-C------------------
Q 006633 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALER-G------------------ 263 (637)
Q Consensus 206 ~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~er-g------------------ 263 (637)
+.+.+++......+.+|||||||+|.++..++..+ |+++|+++.++..+......+. .
T Consensus 43 ~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~ 122 (263)
T 2a14_A 43 ECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSG 122 (263)
T ss_dssp HHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGG
T ss_pred HHHHHHhcCCCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCc
Confidence 34445543233345589999999998877776664 5666665544443322111000 0
Q ss_pred ----------CCeE-EEEecccc-CCC---CCCCeeEEEeccccccCCc--CCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 264 ----------VPAL-IGVMASIR-LPY---PSRAFDMAHCSRCLIPWGQ--YADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 264 ----------~~~~-~~~~d~~~-Lpf---pd~sFDlV~~s~~L~h~~~--~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
..+. +..+|... .|+ ..++||+|+++.+++|... ++...++.++.|+|||||+|++++.
T Consensus 123 ~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 123 RWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp GHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred chhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 0122 66777666 344 3679999999999977542 1557899999999999999999964
No 86
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.18 E-value=5.8e-11 Score=123.28 Aligned_cols=113 Identities=20% Similarity=0.229 Sum_probs=78.8
Q ss_pred HHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc---CCEEEEcCccccHHHHHHHHHHc------------CCCeEEE
Q 006633 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER------------GVPALIG 269 (637)
Q Consensus 205 i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~---~v~~vdisp~Dls~a~i~~A~er------------g~~~~~~ 269 (637)
++.+.+.+........+|||+|||+|.++..+++. .++++|+++ .+++.|+++ ...+.+.
T Consensus 21 ~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~-----~~l~~a~~~~~~~~~~~~~~~~~~~~~~ 95 (313)
T 3bgv_A 21 IGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIAD-----VSVKQCQQRYEDMKNRRDSEYIFSAEFI 95 (313)
T ss_dssp HHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCH-----HHHHHHHHHHHHHHSSSCC-CCCEEEEE
T ss_pred HHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCH-----HHHHHHHHHHHHhhhcccccccceEEEE
Confidence 34444444333223459999999999999999875 345555544 444444432 1257888
Q ss_pred EeccccCC----CC--CCCeeEEEeccccccCCc--CCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 270 VMASIRLP----YP--SRAFDMAHCSRCLIPWGQ--YADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 270 ~~d~~~Lp----fp--d~sFDlV~~s~~L~h~~~--~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.+|...++ ++ +++||+|+|+.++++... ++...++.++.++|||||.|+++.+
T Consensus 96 ~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 96 TADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp ECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 88888876 54 459999999999854412 1457899999999999999999876
No 87
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.18 E-value=4.4e-10 Score=110.17 Aligned_cols=106 Identities=9% Similarity=-0.034 Sum_probs=76.7
Q ss_pred HHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc----CC--CeEEEEeccccCCC
Q 006633 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRLPY 278 (637)
Q Consensus 205 i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er----g~--~~~~~~~d~~~Lpf 278 (637)
...+.+.+...++ .+|||+|||+|.++..+++++..++.+ |+++.+++.|+++ +. ++.+...|......
T Consensus 44 ~~~~l~~l~~~~~--~~vLDlGcG~G~~~~~la~~~~~v~~v---D~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~ 118 (204)
T 3njr_A 44 RALTLAALAPRRG--ELLWDIGGGSGSVSVEWCLAGGRAITI---EPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA 118 (204)
T ss_dssp HHHHHHHHCCCTT--CEEEEETCTTCHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT
T ss_pred HHHHHHhcCCCCC--CEEEEecCCCCHHHHHHHHcCCEEEEE---eCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc
Confidence 3345555555554 499999999999999999886544444 4455555555433 44 48888888776333
Q ss_pred CCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 279 PSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 279 pd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
....||+|++...+ +.. ++.++.++|||||.+++...
T Consensus 119 ~~~~~D~v~~~~~~------~~~-~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 119 DLPLPEAVFIGGGG------SQA-LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp TSCCCSEEEECSCC------CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred cCCCCCEEEECCcc------cHH-HHHHHHHhcCCCcEEEEEec
Confidence 34579999987644 566 99999999999999999865
No 88
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.17 E-value=3.5e-11 Score=119.12 Aligned_cols=90 Identities=13% Similarity=0.196 Sum_probs=77.1
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEecc-ccCCCC-CCCeeEEEeccccccCC
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMAS-IRLPYP-SRAFDMAHCSRCLIPWG 296 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~-~~Lpfp-d~sFDlV~~s~~L~h~~ 296 (637)
+.+|||||||+|.++..|++.+..++.+ |+++.+++.++++..++.+...|. ..+|++ +++||+|+++.
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~------ 119 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQAARWAAY---DFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRR------ 119 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSSEEEEE---ESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEES------
T ss_pred CCeEEEeCCCCCHHHHHHHHcCCEEEEE---ECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCC------
Confidence 3499999999999999999987666666 777788888888877789999998 678888 89999999972
Q ss_pred cCCHHHHHHHHHhcccCCeEEEE
Q 006633 297 QYADGLYLIEVDRVLRPGGYWIL 319 (637)
Q Consensus 297 ~~d~~~~L~ei~RvLKPGG~Lvl 319 (637)
+...++.++.++|||||.++.
T Consensus 120 --~~~~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 120 --GPTSVILRLPELAAPDAHFLY 140 (226)
T ss_dssp --CCSGGGGGHHHHEEEEEEEEE
T ss_pred --CHHHHHHHHHHHcCCCcEEEE
Confidence 566789999999999999993
No 89
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.16 E-value=5.4e-11 Score=120.34 Aligned_cols=114 Identities=13% Similarity=0.110 Sum_probs=81.0
Q ss_pred HHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc-----CCEEEEcCcc------ccHHHHHHHHHHcC--CCeEEEE
Q 006633 204 YIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-----NILAVSFAPR------DTHEAQVQFALERG--VPALIGV 270 (637)
Q Consensus 204 ~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-----~v~~vdisp~------Dls~a~i~~A~erg--~~~~~~~ 270 (637)
....+.+.+...++ .+|||||||+|.++..++++ .++++|+++. .+..++.+ ....+ ..+.+..
T Consensus 31 ~~~~l~~~~~~~~~--~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~-~~~~~~~~~v~~~~ 107 (275)
T 3bkx_A 31 HRLAIAEAWQVKPG--EKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNH-LLAGPLGDRLTVHF 107 (275)
T ss_dssp HHHHHHHHHTCCTT--CEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHH-HHTSTTGGGEEEEC
T ss_pred HHHHHHHHcCCCCC--CEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHH-HHhcCCCCceEEEE
Confidence 34455555555554 49999999999999999876 2455566553 33333222 22233 2477887
Q ss_pred ec---cccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 271 MA---SIRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 271 ~d---~~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.| ...+|+++++||+|++..+++|+. +...+++.+.++++|||++++...
T Consensus 108 ~d~~~~~~~~~~~~~fD~v~~~~~l~~~~--~~~~~~~~~~~l~~~gG~l~~~~~ 160 (275)
T 3bkx_A 108 NTNLSDDLGPIADQHFDRVVLAHSLWYFA--SANALALLFKNMAAVCDHVDVAEW 160 (275)
T ss_dssp SCCTTTCCGGGTTCCCSEEEEESCGGGSS--CHHHHHHHHHHHTTTCSEEEEEEE
T ss_pred CChhhhccCCCCCCCEEEEEEccchhhCC--CHHHHHHHHHHHhCCCCEEEEEEe
Confidence 77 556778889999999999998887 677777777777788999999864
No 90
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.16 E-value=2.3e-10 Score=119.38 Aligned_cols=115 Identities=16% Similarity=0.117 Sum_probs=84.9
Q ss_pred HHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHc----CC--CeEEEEecccc
Q 006633 204 YIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIR 275 (637)
Q Consensus 204 ~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~er----g~--~~~~~~~d~~~ 275 (637)
....+.+.++.......+|||||||+|.++..++++ +..++.+ |++ .+++.|+++ +. .+.+...|...
T Consensus 151 ~~~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 226 (335)
T 2r3s_A 151 PAQLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGV---DWA-SVLEVAKENARIQGVASRYHTIAGSAFE 226 (335)
T ss_dssp HHHHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEE---ECH-HHHHHHHHHHHHHTCGGGEEEEESCTTT
T ss_pred hHHHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEE---ecH-HHHHHHHHHHHhcCCCcceEEEeccccc
Confidence 344555555440022459999999999999999887 5555555 556 666655543 32 37888888877
Q ss_pred CCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCC
Q 006633 276 LPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPP 323 (637)
Q Consensus 276 Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp 323 (637)
.+++++ ||+|++..+++||.+++...+++++.++|||||++++..+.
T Consensus 227 ~~~~~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 273 (335)
T 2r3s_A 227 VDYGND-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFI 273 (335)
T ss_dssp SCCCSC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCCCCC-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeec
Confidence 777755 99999999999887435679999999999999999998653
No 91
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.15 E-value=3.3e-10 Score=117.82 Aligned_cols=131 Identities=13% Similarity=0.122 Sum_probs=86.1
Q ss_pred CCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHcCCCeEE-EEeccccCC---CCCCCeeEEEeccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALERGVPALI-GVMASIRLP---YPSRAFDMAHCSRC 291 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~erg~~~~~-~~~d~~~Lp---fpd~sFDlV~~s~~ 291 (637)
+.+|||||||||.++..|++++ |+++|+++.++. .+.+....+.. ...+...++ ++..+||+|++..+
T Consensus 86 g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~-----~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~s 160 (291)
T 3hp7_A 86 DMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLV-----WKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVS 160 (291)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSC-----HHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCS
T ss_pred ccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHH-----HHHHhCcccceecccCceecchhhCCCCCCCEEEEEee
Confidence 4599999999999999998874 667777665554 33333333322 222333333 34456999999887
Q ss_pred cccCCcCCHHHHHHHHHhcccCCeEEEEEeCCC-Cccccc---cCCCCchhhhHHhHhhHHHHHHHhceeee
Q 006633 292 LIPWGQYADGLYLIEVDRVLRPGGYWILSGPPV-NWESHW---KGWNRTTEDLKSEQNGIETIARSLCWKKL 359 (637)
Q Consensus 292 L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~-~w~~~~---~~w~~t~e~l~~~~~~ie~la~~l~w~~v 359 (637)
++++ ..+|.++.|+|||||.|++...|. +..... .+.-+.........+++..++...+|...
T Consensus 161 f~sl-----~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~ 227 (291)
T 3hp7_A 161 FISL-----NLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVK 227 (291)
T ss_dssp SSCG-----GGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEE
T ss_pred HhhH-----HHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEE
Confidence 7543 569999999999999999974322 111111 12333445555667778888888999654
No 92
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.15 E-value=1.3e-10 Score=113.80 Aligned_cols=138 Identities=16% Similarity=0.135 Sum_probs=88.3
Q ss_pred CCEEEEECCCCchHHHHHhhc----CCEEEEcCccccHHHHHHHHH----HcCC-CeEEEEeccccCCCCCCCeeEEEec
Q 006633 219 IRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFAL----ERGV-PALIGVMASIRLPYPSRAFDMAHCS 289 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~----~v~~vdisp~Dls~a~i~~A~----erg~-~~~~~~~d~~~Lpfpd~sFDlV~~s 289 (637)
+.+|||||||+|.++..|+++ .++++|+++.++.... +.|+ ..+. ++.+..+|...+|+++++ |.|+..
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~-~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~ 105 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKIS-AKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVL 105 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHH-HHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHH-HHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEE
Confidence 348999999999999999987 3677777766555322 1222 2233 688999999999998777 877743
Q ss_pred ccc---c--cCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCch-hhhHHhHhhHHHHHHHhceeeec
Q 006633 290 RCL---I--PWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTT-EDLKSEQNGIETIARSLCWKKLI 360 (637)
Q Consensus 290 ~~L---~--h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~-e~l~~~~~~ie~la~~l~w~~v~ 360 (637)
... + |.. +...+++++.|+|||||.++++.....|........... .......+.+..+....+|+...
T Consensus 106 ~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 106 MPWGSLLRGVLG--SSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp SCCHHHHHHHHT--SSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEE
T ss_pred ccchhhhhhhhc--cHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCcee
Confidence 322 1 333 568899999999999999999754333322111100000 01111223477778888886543
No 93
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.15 E-value=1.3e-10 Score=117.41 Aligned_cols=93 Identities=24% Similarity=0.381 Sum_probs=78.6
Q ss_pred CCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccCC
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWG 296 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~ 296 (637)
+.+|||||||+|.++..+++. +..++.+ |+++.+++.|.++...+.+...+...+|+++++||+|++..+.
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~---- 158 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEITTFGL---DVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP---- 158 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTSEEEEE---ESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC----
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCeEEEE---eCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh----
Confidence 458999999999999999987 5566666 6677888888888877889999998999999999999986542
Q ss_pred cCCHHHHHHHHHhcccCCeEEEEEeCC
Q 006633 297 QYADGLYLIEVDRVLRPGGYWILSGPP 323 (637)
Q Consensus 297 ~~d~~~~L~ei~RvLKPGG~Lvls~pp 323 (637)
..+.++.|+|||||.+++..+.
T Consensus 159 -----~~l~~~~~~L~pgG~l~~~~~~ 180 (269)
T 1p91_A 159 -----CKAEELARVVKPGGWVITATPG 180 (269)
T ss_dssp -----CCHHHHHHHEEEEEEEEEEEEC
T ss_pred -----hhHHHHHHhcCCCcEEEEEEcC
Confidence 1579999999999999999763
No 94
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.14 E-value=3.3e-10 Score=111.01 Aligned_cols=102 Identities=13% Similarity=0.151 Sum_probs=73.2
Q ss_pred CCEEEEECCCCchHHHHHhhc--C--CEEEEcCccccHHHHHHHHHHcC-CCeEEEEeccccCC--CCCCCeeEEEeccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--N--ILAVSFAPRDTHEAQVQFALERG-VPALIGVMASIRLP--YPSRAFDMAHCSRC 291 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~--v~~vdisp~Dls~a~i~~A~erg-~~~~~~~~d~~~Lp--fpd~sFDlV~~s~~ 291 (637)
..+|||||||+|.++..+++. + ++++|+++..+..+..+.. ..+ .++.+..+|...++ +++++||+|+++..
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVL-EVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHH-HHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHH-HcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 348999999999999999876 3 5555554433333322222 223 36888888888877 77889999999865
Q ss_pred cccCCcC-------CHHHHHHHHHhcccCCeEEEEEeC
Q 006633 292 LIPWGQY-------ADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 292 L~h~~~~-------d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
. +|... ....++.++.++|||||.+++...
T Consensus 121 ~-~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 157 (214)
T 1yzh_A 121 D-PWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTD 157 (214)
T ss_dssp C-CCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEES
T ss_pred C-CccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeC
Confidence 4 44320 125799999999999999999853
No 95
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.14 E-value=5.1e-10 Score=105.25 Aligned_cols=109 Identities=17% Similarity=0.068 Sum_probs=75.0
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHc----CC--CeEEEEecc
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMAS 273 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~er----g~--~~~~~~~d~ 273 (637)
+.....+.+.+...++ .+|||+|||+|.++..+++. +..++.+ |+++.+++.|+++ +. .+ +...+.
T Consensus 11 ~~~~~~~~~~~~~~~~--~~vldiG~G~G~~~~~l~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~~-~~~~d~ 84 (178)
T 3hm2_A 11 QHVRALAISALAPKPH--ETLWDIGGGSGSIAIEWLRSTPQTTAVCF---EISEERRERILSNAINLGVSDRI-AVQQGA 84 (178)
T ss_dssp HHHHHHHHHHHCCCTT--EEEEEESTTTTHHHHHHHTTSSSEEEEEE---CSCHHHHHHHHHHHHTTTCTTSE-EEECCT
T ss_pred HHHHHHHHHHhcccCC--CeEEEeCCCCCHHHHHHHHHCCCCeEEEE---eCCHHHHHHHHHHHHHhCCCCCE-EEecch
Confidence 3344555666655444 49999999999999999887 4444444 4555566555543 33 35 555554
Q ss_pred -ccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 274 -IRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 274 -~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
..++..+++||+|++...+++ ..+++++.++|||||.+++...
T Consensus 85 ~~~~~~~~~~~D~i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 85 PRAFDDVPDNPDVIFIGGGLTA------PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp TGGGGGCCSCCSEEEECC-TTC------TTHHHHHHHTCCTTCEEEEEEC
T ss_pred HhhhhccCCCCCEEEECCcccH------HHHHHHHHHhcCCCCEEEEEee
Confidence 333433388999999988854 3489999999999999999864
No 96
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.13 E-value=1.8e-10 Score=111.90 Aligned_cols=108 Identities=14% Similarity=0.045 Sum_probs=80.0
Q ss_pred HHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc----C-CCeEEEEeccccCC
Q 006633 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----G-VPALIGVMASIRLP 277 (637)
Q Consensus 203 ~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er----g-~~~~~~~~d~~~Lp 277 (637)
.....+.+.+...++ .+|||+|||+|.++..|++.+..++.+ |+++.+++.|+++ + .++.+...|....+
T Consensus 64 ~~~~~~~~~l~~~~~--~~vLdiG~G~G~~~~~la~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~ 138 (210)
T 3lbf_A 64 YMVARMTELLELTPQ--SRVLEIGTGSGYQTAILAHLVQHVCSV---ERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGW 138 (210)
T ss_dssp HHHHHHHHHTTCCTT--CEEEEECCTTSHHHHHHHHHSSEEEEE---ESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC
T ss_pred HHHHHHHHhcCCCCC--CEEEEEcCCCCHHHHHHHHhCCEEEEE---ecCHHHHHHHHHHHHHcCCCceEEEECCcccCC
Confidence 445566666665554 499999999999999999885444444 4444555554432 3 35788888887776
Q ss_pred CCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCC
Q 006633 278 YPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPP 323 (637)
Q Consensus 278 fpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp 323 (637)
.++++||+|++..+++|+. + ++.++|||||++++..++
T Consensus 139 ~~~~~~D~i~~~~~~~~~~--~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 139 QARAPFDAIIVTAAPPEIP--T------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GGGCCEEEEEESSBCSSCC--T------HHHHTEEEEEEEEEEECS
T ss_pred ccCCCccEEEEccchhhhh--H------HHHHhcccCcEEEEEEcC
Confidence 6778999999999886666 2 689999999999999763
No 97
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.12 E-value=2.4e-10 Score=132.19 Aligned_cols=123 Identities=15% Similarity=0.162 Sum_probs=75.3
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----ccc----chhh-ccccccCCCCCccceeeecc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GLI----GTYQ-NWCEAMSTYPRTYDLIHADS 548 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl~----~~~~-~wce~~~~yp~t~Dl~H~~~ 548 (637)
...|||+|||+|+|+-+++..+- -.|+.+|.++..+..+.+. |+- -+++ |..+.+.....+||+|-++-
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga--~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DP 617 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGA--RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDP 617 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECC
T ss_pred CCcEEEeeechhHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECC
Confidence 46899999999999998876653 2456667777788777664 332 1221 22121222347899998865
Q ss_pred c-cccC-------CCCcCHHHHHHHHhhcccCCcEEEEEeCHHHHHHHHHHHhcCCceeEEe
Q 006633 549 I-FSLY-------KDRCEMEDVLLEMDRILRPEGSVIIRDDVDILVKIKSITDGMEWEGRIA 602 (637)
Q Consensus 549 l-fs~~-------~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~~~~~~~~~~~~~~W~~~~~ 602 (637)
- |+.. ...-+...++.++-|+|+|||.++++-.......-.+.+....++....
T Consensus 618 P~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~~~~~~l~~~g~~~~~i 679 (703)
T 3v97_A 618 PTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEI 679 (703)
T ss_dssp CSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCCCCHHHHHHTTEEEEEC
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccccCHHHHHHcCCceeee
Confidence 3 3211 1123456789999999999999999854421111233444455554443
No 98
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.12 E-value=2.1e-10 Score=113.14 Aligned_cols=100 Identities=12% Similarity=0.180 Sum_probs=73.9
Q ss_pred CCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHH----cCC-CeEEEEeccccCC--CCCCCeeEEEec
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALE----RGV-PALIGVMASIRLP--YPSRAFDMAHCS 289 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~e----rg~-~~~~~~~d~~~Lp--fpd~sFDlV~~s 289 (637)
..+|||||||+|.++..|++. +..++++ |+++.+++.|.+ .+. ++.+..+|+..++ +++++||.|++.
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gi---D~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGI---ELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLN 115 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEE---CSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEE
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEE---EechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEE
Confidence 348999999999999999886 4444444 445555555443 343 5888888888776 788999999986
Q ss_pred cccccCCcC-------CHHHHHHHHHhcccCCeEEEEEeC
Q 006633 290 RCLIPWGQY-------ADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 290 ~~L~h~~~~-------d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
... +|... ....++.++.++|||||.|++...
T Consensus 116 ~~~-p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td 154 (213)
T 2fca_A 116 FSD-PWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTD 154 (213)
T ss_dssp SCC-CCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEES
T ss_pred CCC-CCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeC
Confidence 543 44420 136799999999999999999863
No 99
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.12 E-value=2.8e-10 Score=112.24 Aligned_cols=108 Identities=14% Similarity=0.047 Sum_probs=79.8
Q ss_pred HHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCC---CeEEEEeccccCCCC
Q 006633 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGV---PALIGVMASIRLPYP 279 (637)
Q Consensus 203 ~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~---~~~~~~~d~~~Lpfp 279 (637)
...+.+.+.+...++. +|||||||+|.++..|++.+..++.+ |+++.+++.++++.. ++.+...|......+
T Consensus 57 ~~~~~~~~~~~~~~~~--~vLdiG~G~G~~~~~l~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~ 131 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQ--KVLEIGTGIGYYTALIAEIVDKVVSV---EINEKMYNYASKLLSYYNNIKLILGDGTLGYEE 131 (231)
T ss_dssp HHHHHHHHHTTCCTTC--EEEEECCTTSHHHHHHHHHSSEEEEE---ESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGG
T ss_pred HHHHHHHHhcCCCCCC--EEEEEcCCCCHHHHHHHHHcCEEEEE---eCCHHHHHHHHHHHhhcCCeEEEECCccccccc
Confidence 4455666666555444 99999999999999999875444444 555666666665422 678888887663334
Q ss_pred CCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCC
Q 006633 280 SRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPP 323 (637)
Q Consensus 280 d~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp 323 (637)
+++||+|++..+++|+. .++.++|||||.+++..++
T Consensus 132 ~~~fD~v~~~~~~~~~~--------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 132 EKPYDRVVVWATAPTLL--------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp GCCEEEEEESSBBSSCC--------HHHHHTEEEEEEEEEEECS
T ss_pred CCCccEEEECCcHHHHH--------HHHHHHcCCCcEEEEEEcC
Confidence 67899999999987665 4689999999999999763
No 100
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.12 E-value=2.9e-10 Score=108.03 Aligned_cols=115 Identities=11% Similarity=0.025 Sum_probs=84.2
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccCCcC
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQY 298 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~~ 298 (637)
+.+|||+|||+|.++..|++++ .++++ |+++.+++. ..++.+..+|... ++++++||+|+++..+++..+.
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~-~v~gv---D~s~~~~~~----~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN-TVVST---DLNIRALES----HRGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS-EEEEE---ESCHHHHHT----CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCC
T ss_pred CCeEEEeccCccHHHHHHHhcC-cEEEE---ECCHHHHhc----ccCCeEEECChhh-hcccCCCCEEEECCCCccCCcc
Confidence 3499999999999999999987 55555 667677665 3456777888766 6677899999999888544321
Q ss_pred -------CHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHhceeeec
Q 006633 299 -------ADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 360 (637)
Q Consensus 299 -------d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w~~v~ 360 (637)
+...++.++.+.| |||.+++..+.. ...+.+.++.+..+|+...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~-----------------~~~~~l~~~l~~~gf~~~~ 145 (170)
T 3q87_B 95 PIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA-----------------NRPKEVLARLEERGYGTRI 145 (170)
T ss_dssp TTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG-----------------GCHHHHHHHHHHTTCEEEE
T ss_pred ccccCCcchHHHHHHHHhhC-CCCEEEEEEecC-----------------CCHHHHHHHHHHCCCcEEE
Confidence 2357889999999 999999986411 0123466677777886543
No 101
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.12 E-value=7.9e-10 Score=103.87 Aligned_cols=136 Identities=11% Similarity=0.027 Sum_probs=92.5
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc----C-CCeEEEEeccccC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----G-VPALIGVMASIRL 276 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er----g-~~~~~~~~d~~~L 276 (637)
+...+.+.+.+...++ .+|||+|||+|.++..+++.+..++.+ |+++.+++.++++ + .++.+...|...
T Consensus 21 ~~~~~~~~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~- 94 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNKD--DVVVDVGCGSGGMTVEIAKRCKFVYAI---DYLDGAIEVTKQNLAKFNIKNCQIIKGRAED- 94 (183)
T ss_dssp HHHHHHHHHHHCCCTT--CEEEEESCCCSHHHHHHHTTSSEEEEE---ECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-
T ss_pred HHHHHHHHHHcCCCCC--CEEEEeCCCCCHHHHHHHhcCCeEEEE---eCCHHHHHHHHHHHHHcCCCcEEEEECCccc-
Confidence 4555666777665444 499999999999999999865444444 4444455444433 3 357888888766
Q ss_pred CCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHhce
Q 006633 277 PYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCW 356 (637)
Q Consensus 277 pfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w 356 (637)
++++++||+|+++.+ . +...++.++.++ |||.+++..+. ... ..++.+..+..+|
T Consensus 95 ~~~~~~~D~i~~~~~-----~-~~~~~l~~~~~~--~gG~l~~~~~~-------------~~~----~~~~~~~l~~~g~ 149 (183)
T 2yxd_A 95 VLDKLEFNKAFIGGT-----K-NIEKIIEILDKK--KINHIVANTIV-------------LEN----AAKIINEFESRGY 149 (183)
T ss_dssp HGGGCCCSEEEECSC-----S-CHHHHHHHHHHT--TCCEEEEEESC-------------HHH----HHHHHHHHHHTTC
T ss_pred cccCCCCcEEEECCc-----c-cHHHHHHHHhhC--CCCEEEEEecc-------------ccc----HHHHHHHHHHcCC
Confidence 667789999999876 3 788999999999 99999998751 111 2335556667777
Q ss_pred eeecccCcEEEE
Q 006633 357 KKLIQKKDLAIW 368 (637)
Q Consensus 357 ~~v~~~~~~aIW 368 (637)
..........-+
T Consensus 150 ~~~~~~~~~~~~ 161 (183)
T 2yxd_A 150 NVDAVNVFISYA 161 (183)
T ss_dssp EEEEEEEEEEEE
T ss_pred eEEEEEeeeehh
Confidence 555443333333
No 102
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.11 E-value=2.7e-10 Score=115.51 Aligned_cols=118 Identities=17% Similarity=0.130 Sum_probs=82.7
Q ss_pred CCEEEEECCCCchHHHHHhhcC--CEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccCC
Q 006633 219 IRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWG 296 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~--v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~ 296 (637)
+.+|||+|||+|.++..+++.+ ++++|+++..+..+..+ +..++..+.+...+.... +++++||+|+++...+
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n-~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~~~--- 195 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEAN-AKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLYAE--- 195 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHH-HHHTTCCCEEEESCHHHH-GGGCCEEEEEEECCHH---
T ss_pred CCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHH-HHHcCCcEEEEECChhhc-CcCCCCCEEEECCcHH---
Confidence 4599999999999999998875 56677766555544433 233454467776665442 4567899999976442
Q ss_pred cCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHhceeeec
Q 006633 297 QYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 360 (637)
Q Consensus 297 ~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w~~v~ 360 (637)
....++.++.++|||||++++++... ...+.+...+++.+|+.+.
T Consensus 196 --~~~~~l~~~~~~LkpgG~lils~~~~-----------------~~~~~v~~~l~~~Gf~~~~ 240 (254)
T 2nxc_A 196 --LHAALAPRYREALVPGGRALLTGILK-----------------DRAPLVREAMAGAGFRPLE 240 (254)
T ss_dssp --HHHHHHHHHHHHEEEEEEEEEEEEEG-----------------GGHHHHHHHHHHTTCEEEE
T ss_pred --HHHHHHHHHHHHcCCCCEEEEEeecc-----------------CCHHHHHHHHHHCCCEEEE
Confidence 34679999999999999999986411 1134466677777887654
No 103
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.11 E-value=1.1e-09 Score=107.84 Aligned_cols=122 Identities=16% Similarity=0.048 Sum_probs=81.7
Q ss_pred CCEEEEECCC-CchHHHHHhhc-CCEEEEcCccccHHHHHHHHH----HcCCCeEEEEeccccC-CCCCCCeeEEEeccc
Q 006633 219 IRTAIDTGCG-VASWGAYLMSR-NILAVSFAPRDTHEAQVQFAL----ERGVPALIGVMASIRL-PYPSRAFDMAHCSRC 291 (637)
Q Consensus 219 ~r~VLDIGCG-tG~~a~~La~~-~v~~vdisp~Dls~a~i~~A~----erg~~~~~~~~d~~~L-pfpd~sFDlV~~s~~ 291 (637)
+.+|||+||| +|.++..+++. +..++.+ |+++.+++.|+ ..+.++.+..+|...+ ++++++||+|+++..
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFFNCKVTAT---EVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHHCCEEEEE---ECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred CCEEEEcCCCHHHHHHHHHHHhcCCEEEEE---ECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCC
Confidence 4599999999 99999999887 5444333 44444444443 3355788888886433 566789999999876
Q ss_pred cccCCcC-----------------CHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHh
Q 006633 292 LIPWGQY-----------------ADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSL 354 (637)
Q Consensus 292 L~h~~~~-----------------d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l 354 (637)
+++.... ....+++++.++|||||.+++..+. .. .....+....++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~------------~~----~~~~~~~~~l~~~ 196 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD------------KE----KLLNVIKERGIKL 196 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES------------CH----HHHHHHHHHHHHT
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc------------cH----hHHHHHHHHHHHc
Confidence 6443210 1378999999999999999997641 11 1233456667777
Q ss_pred ceeee
Q 006633 355 CWKKL 359 (637)
Q Consensus 355 ~w~~v 359 (637)
+|...
T Consensus 197 g~~~~ 201 (230)
T 3evz_A 197 GYSVK 201 (230)
T ss_dssp TCEEE
T ss_pred CCceE
Confidence 77543
No 104
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.11 E-value=7.8e-10 Score=111.89 Aligned_cols=119 Identities=17% Similarity=0.124 Sum_probs=80.5
Q ss_pred CcccHHHHHHHHHHHhccc-CCCCCEEEEECCCCchHHHHHhhcCC-EEEEcCccccHHHHHHHHHHc----CC--CeEE
Q 006633 197 FPRGADAYIDDIGKLINLK-DGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALER----GV--PALI 268 (637)
Q Consensus 197 f~~g~~~~i~~L~~lL~~~-~g~~r~VLDIGCGtG~~a~~La~~~v-~~vdisp~Dls~a~i~~A~er----g~--~~~~ 268 (637)
|..+.+.. .+..+++.. ++ .+|||+|||+|.++..+++++. .++.+ |+++.+++.|+++ +. .+.+
T Consensus 31 ~~~~~d~~--ll~~~~~~~~~~--~~vLDlG~G~G~~~~~la~~~~~~v~gv---Di~~~~~~~a~~n~~~~~~~~~v~~ 103 (259)
T 3lpm_A 31 FSFSIDAV--LLAKFSYLPIRK--GKIIDLCSGNGIIPLLLSTRTKAKIVGV---EIQERLADMAKRSVAYNQLEDQIEI 103 (259)
T ss_dssp BCCCHHHH--HHHHHCCCCSSC--CEEEETTCTTTHHHHHHHTTCCCEEEEE---CCSHHHHHHHHHHHHHTTCTTTEEE
T ss_pred ccCcHHHH--HHHHHhcCCCCC--CEEEEcCCchhHHHHHHHHhcCCcEEEE---ECCHHHHHHHHHHHHHCCCcccEEE
Confidence 34455544 355555544 43 4999999999999999998732 33344 4445555544432 33 3788
Q ss_pred EEeccccCC--CCCCCeeEEEeccccccC-----Cc-------------CCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 269 GVMASIRLP--YPSRAFDMAHCSRCLIPW-----GQ-------------YADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 269 ~~~d~~~Lp--fpd~sFDlV~~s~~L~h~-----~~-------------~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
...|...++ +++++||+|+++..+.+. .. .+...++.++.++|||||.|++..+
T Consensus 104 ~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 177 (259)
T 3lpm_A 104 IEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR 177 (259)
T ss_dssp ECSCGGGGGGTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EECcHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc
Confidence 888887765 567899999998655332 00 0245799999999999999999865
No 105
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.10 E-value=7.1e-10 Score=118.35 Aligned_cols=109 Identities=17% Similarity=0.178 Sum_probs=79.9
Q ss_pred HHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHH----cC--CCeEEEEeccccCC
Q 006633 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALE----RG--VPALIGVMASIRLP 277 (637)
Q Consensus 206 ~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~e----rg--~~~~~~~~d~~~Lp 277 (637)
..+.+.++... ..+|||||||+|.++..++++ +..++.+ |+ +.+++.|++ .+ ..+.+...|.. .+
T Consensus 192 ~~l~~~~~~~~--~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~ 264 (369)
T 3gwz_A 192 GQVAAAYDFSG--AATAVDIGGGRGSLMAAVLDAFPGLRGTLL---ER-PPVAEEARELLTGRGLADRCEILPGDFF-ET 264 (369)
T ss_dssp HHHHHHSCCTT--CSEEEEETCTTSHHHHHHHHHCTTCEEEEE---EC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TC
T ss_pred HHHHHhCCCcc--CcEEEEeCCCccHHHHHHHHHCCCCeEEEE---cC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CC
Confidence 33444444333 459999999999999999887 4455544 44 445554443 23 35888888876 56
Q ss_pred CCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 278 YPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 278 fpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++. .||+|++..++++|.+++...+|+++.++|||||+|++..+
T Consensus 265 ~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 265 IPD-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp CCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred CCC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 666 89999999999888842334899999999999999999864
No 106
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.10 E-value=2.3e-10 Score=111.73 Aligned_cols=116 Identities=11% Similarity=0.078 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHhccc-CCCCCEEEEECCCCchHHHHHhhcCC-EEEEcCccccHHHHHHHHHH----cCC---CeEEEEe
Q 006633 201 ADAYIDDIGKLINLK-DGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALE----RGV---PALIGVM 271 (637)
Q Consensus 201 ~~~~i~~L~~lL~~~-~g~~r~VLDIGCGtG~~a~~La~~~v-~~vdisp~Dls~a~i~~A~e----rg~---~~~~~~~ 271 (637)
.+.+.+.+.+.+... .+ .+|||+|||+|.++..++.++. .++.+ |+++.+++.|++ .+. .+.+..+
T Consensus 37 ~~~~~~~l~~~l~~~~~~--~~vLDlGcGtG~~~~~~~~~~~~~v~gv---D~s~~~l~~a~~~~~~~~~~~~~v~~~~~ 111 (201)
T 2ift_A 37 GDRVKETLFNWLMPYIHQ--SECLDGFAGSGSLGFEALSRQAKKVTFL---ELDKTVANQLKKNLQTLKCSSEQAEVINQ 111 (201)
T ss_dssp -CHHHHHHHHHHHHHHTT--CEEEETTCTTCHHHHHHHHTTCSEEEEE---CSCHHHHHHHHHHHHHTTCCTTTEEEECS
T ss_pred HHHHHHHHHHHHHHhcCC--CeEEEcCCccCHHHHHHHHccCCEEEEE---ECCHHHHHHHHHHHHHhCCCccceEEEEC
Confidence 344455555555432 33 4899999999999998777642 33333 444455544443 343 6788888
Q ss_pred ccccCCC--CCCC-eeEEEeccccccCCcCCHHHHHHHH--HhcccCCeEEEEEeCCC
Q 006633 272 ASIRLPY--PSRA-FDMAHCSRCLIPWGQYADGLYLIEV--DRVLRPGGYWILSGPPV 324 (637)
Q Consensus 272 d~~~Lpf--pd~s-FDlV~~s~~L~h~~~~d~~~~L~ei--~RvLKPGG~Lvls~pp~ 324 (637)
|...+.. ++++ ||+|++...+ +.. +...++.++ .|+|||||.++++..+.
T Consensus 112 d~~~~~~~~~~~~~fD~I~~~~~~-~~~--~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 112 SSLDFLKQPQNQPHFDVVFLDPPF-HFN--LAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CHHHHTTSCCSSCCEEEEEECCCS-SSC--HHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CHHHHHHhhccCCCCCEEEECCCC-CCc--cHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 8766432 4678 9999998875 433 677889999 77899999999987543
No 107
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.09 E-value=3.6e-10 Score=119.11 Aligned_cols=162 Identities=14% Similarity=0.083 Sum_probs=99.4
Q ss_pred HHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--C--CEEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccCC-CC
Q 006633 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--N--ILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRLP-YP 279 (637)
Q Consensus 207 ~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~--v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~Lp-fp 279 (637)
.+.+.++... ...+|||||||+|.++..++++ + ++++|+ +..+..+.. ...+.+. .+.+...|....+ +.
T Consensus 169 ~~l~~~~~~~-~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~-~~~~~~~~~~v~~~~~d~~~~~~~~ 245 (352)
T 3mcz_A 169 DVVSELGVFA-RARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARK-TIHAHDLGGRVEFFEKNLLDARNFE 245 (352)
T ss_dssp HHHHTCGGGT-TCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHH-HHHHTTCGGGEEEEECCTTCGGGGT
T ss_pred HHHHhCCCcC-CCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHH-HHHhcCCCCceEEEeCCcccCcccC
Confidence 3444444333 1459999999999999999886 3 445555 433332222 2223333 4788888877765 23
Q ss_pred CCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchh----------hhHHhHhhHHH
Q 006633 280 SRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTE----------DLKSEQNGIET 349 (637)
Q Consensus 280 d~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e----------~l~~~~~~ie~ 349 (637)
.+.||+|++..+++||.+++...+++++.++|||||++++..+...-.... .+..... ......+++++
T Consensus 246 ~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~e~~~ 324 (352)
T 3mcz_A 246 GGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVT-PALSADFSLHMMVNTNHGELHPTPWIAG 324 (352)
T ss_dssp TCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSS-SHHHHHHHHHHHHHSTTCCCCCHHHHHH
T ss_pred CCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCC-CchHHHhhHHHHhhCCCCCcCCHHHHHH
Confidence 456999999999999985345899999999999999999986422110000 0000000 00112345778
Q ss_pred HHHHhceeeeccc---CcEEEEeccC
Q 006633 350 IARSLCWKKLIQK---KDLAIWQKPT 372 (637)
Q Consensus 350 la~~l~w~~v~~~---~~~aIWqKP~ 372 (637)
+.++.+|+.+... ..+.+-+||.
T Consensus 325 ll~~aGf~~~~~~~g~~~l~~a~kp~ 350 (352)
T 3mcz_A 325 VVRDAGLAVGERSIGRYTLLIGQRSS 350 (352)
T ss_dssp HHHHTTCEEEEEEETTEEEEEEECCC
T ss_pred HHHHCCCceeeeccCceEEEEEecCC
Confidence 8888899877521 1245556663
No 108
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.09 E-value=3e-10 Score=117.21 Aligned_cols=99 Identities=12% Similarity=0.114 Sum_probs=74.0
Q ss_pred CCEEEEECCCCch----HHHHHhhc------CCEEEEcCccccHHHHHHHHHHcC-------------------------
Q 006633 219 IRTAIDTGCGVAS----WGAYLMSR------NILAVSFAPRDTHEAQVQFALERG------------------------- 263 (637)
Q Consensus 219 ~r~VLDIGCGtG~----~a~~La~~------~v~~vdisp~Dls~a~i~~A~erg------------------------- 263 (637)
..+|||+|||+|. ++..|++. +..++.+ |+++.+++.|+++.
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~at---Dis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~ 182 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFAS---DIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPH 182 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEE---ESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTS
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEE---ECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCC
Confidence 3589999999997 56666654 2333333 55666666666531
Q ss_pred -----------CCeEEEEeccccCCCC-CCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEE
Q 006633 264 -----------VPALIGVMASIRLPYP-SRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILS 320 (637)
Q Consensus 264 -----------~~~~~~~~d~~~Lpfp-d~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls 320 (637)
..+.|...|....|++ .+.||+|+|..+++|+.++...+++.++.++|||||+|++.
T Consensus 183 ~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 183 EGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp CSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred CCceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 1367788887776665 67899999999998887544589999999999999999985
No 109
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.08 E-value=7.9e-10 Score=110.50 Aligned_cols=92 Identities=9% Similarity=0.069 Sum_probs=69.8
Q ss_pred CCEEEEECCCCchHHHHHhhc--C--CEEEEcCccccHHHHHHHHHH----cCC-CeEEEEeccccCCCC---CCCeeEE
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--N--ILAVSFAPRDTHEAQVQFALE----RGV-PALIGVMASIRLPYP---SRAFDMA 286 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~--v~~vdisp~Dls~a~i~~A~e----rg~-~~~~~~~d~~~Lpfp---d~sFDlV 286 (637)
+.+|||||||+|.++..|+.. + ++++|+++ .+++.|++ .+. ++.+..++...++++ +++||+|
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~-----~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLN-----KRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCH-----HHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCH-----HHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEE
Confidence 459999999999999998843 3 45555544 44444432 343 588888888887764 6899999
Q ss_pred EeccccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 287 HCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 287 ~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
++..+ . +...++.++.++|||||.|++..
T Consensus 146 ~~~~~----~--~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 146 TARAV----A--RLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp EEECC----S--CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEecc----C--CHHHHHHHHHHhcCCCCEEEEEe
Confidence 99652 2 78899999999999999999873
No 110
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.08 E-value=5e-10 Score=115.09 Aligned_cols=116 Identities=10% Similarity=-0.012 Sum_probs=79.9
Q ss_pred HHHHHHHHHhcccCCCCCEEEEECCCC---chHHHHHhhc--CCEEEEcCccccHHHHHHHHHHc---CCCeEEEEeccc
Q 006633 203 AYIDDIGKLINLKDGSIRTAIDTGCGV---ASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER---GVPALIGVMASI 274 (637)
Q Consensus 203 ~~i~~L~~lL~~~~g~~r~VLDIGCGt---G~~a~~La~~--~v~~vdisp~Dls~a~i~~A~er---g~~~~~~~~d~~ 274 (637)
.+++.+.+.+.... ..++|||||||+ |.++..+.+. +..++.+ |+++.+++.|+++ ...+.+..+|..
T Consensus 63 ~~~~~~~~~l~~~~-~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~v---D~sp~~l~~Ar~~~~~~~~v~~~~~D~~ 138 (274)
T 2qe6_A 63 KVLVRGVRFLAGEA-GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYV---DIDPMVLTHGRALLAKDPNTAVFTADVR 138 (274)
T ss_dssp HHHHHHHHHHHTTT-CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEE---ESSHHHHHHHHHHHTTCTTEEEEECCTT
T ss_pred HHHHHHHHHHhhcc-CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEE---ECChHHHHHHHHhcCCCCCeEEEEeeCC
Confidence 34444545543221 235999999999 9887666553 3334333 4445566555543 245788888875
Q ss_pred cCC-----------CCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 275 RLP-----------YPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 275 ~Lp-----------fpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
..+ ++..+||+|+++.+++|+.+++...+|+++.++|||||+|+++..
T Consensus 139 ~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 139 DPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp CHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 421 333589999999999888754589999999999999999999865
No 111
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.08 E-value=1.4e-10 Score=115.20 Aligned_cols=102 Identities=14% Similarity=0.208 Sum_probs=72.5
Q ss_pred CCEEEEECCCCchHHHHHhhc--C--CEEEEcCccccHHHHHHHHHHcC-CCeEEEEeccccC-C--CCCCCeeEEEecc
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--N--ILAVSFAPRDTHEAQVQFALERG-VPALIGVMASIRL-P--YPSRAFDMAHCSR 290 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~--v~~vdisp~Dls~a~i~~A~erg-~~~~~~~~d~~~L-p--fpd~sFDlV~~s~ 290 (637)
..+|||||||+|.++..|++. + ++++|+++..+..+..+ +.+.+ .++.+..+|+..+ + +++++||.|++.+
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~-~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLAS-AHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHH-HHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHH-HHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 448999999999999999976 3 55555544333332222 22334 3688888887764 3 7889999999976
Q ss_pred ccccCCcC-CH------HHHHHHHHhcccCCeEEEEEeC
Q 006633 291 CLIPWGQY-AD------GLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 291 ~L~h~~~~-d~------~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.. +|+.. .. ..++.++.|+|||||.|++.+.
T Consensus 114 ~~-p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td 151 (218)
T 3dxy_A 114 PD-PWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATD 151 (218)
T ss_dssp CC-CCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEES
T ss_pred CC-CccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeC
Confidence 54 55531 11 2599999999999999999864
No 112
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.08 E-value=3e-10 Score=121.02 Aligned_cols=99 Identities=13% Similarity=0.143 Sum_probs=77.9
Q ss_pred CCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHc----CC--CeEEEEeccccC--CCCCCCeeEEEe
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRL--PYPSRAFDMAHC 288 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~er----g~--~~~~~~~d~~~L--pfpd~sFDlV~~ 288 (637)
..+|||||||+|.++..++++ +..++.+ |+ +.+++.|+++ +. .+.+...|.... |++ ++||+|++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~ 254 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQYNKEVEVTIV---DL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWM 254 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHHSTTCEEEEE---EC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEE---eC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEE
Confidence 459999999999999999885 5555555 55 4555555543 32 478888888775 566 78999999
Q ss_pred ccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 289 SRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 289 s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
..++++|.+++...+|+++.++|||||.+++..+
T Consensus 255 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (363)
T 3dp7_A 255 SQFLDCFSEEEVISILTRVAQSIGKDSKVYIMET 288 (363)
T ss_dssp ESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred echhhhCCHHHHHHHHHHHHHhcCCCcEEEEEee
Confidence 9999999854456899999999999999999864
No 113
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.07 E-value=2.8e-10 Score=119.25 Aligned_cols=98 Identities=18% Similarity=0.222 Sum_probs=76.0
Q ss_pred CCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHc----C--CCeEEEEeccccCCCCCCCeeEEEecc
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----G--VPALIGVMASIRLPYPSRAFDMAHCSR 290 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~er----g--~~~~~~~~d~~~Lpfpd~sFDlV~~s~ 290 (637)
..+|||||||+|.++..++++ +..++.+ |+ +.+++.|+++ + ..+.+...|.. .+++. +||+|++..
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~ 243 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVL---DL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSA 243 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEE---EC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEES
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEe---cC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEeh
Confidence 459999999999999999875 4444444 44 4555544432 3 35888888876 56665 899999999
Q ss_pred ccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 291 CLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 291 ~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+++||.+++...+++++.++|||||++++..+
T Consensus 244 vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 244 VLHDWDDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred hhccCCHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 99999853358999999999999999999865
No 114
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.07 E-value=4.1e-10 Score=108.35 Aligned_cols=99 Identities=14% Similarity=0.157 Sum_probs=72.1
Q ss_pred CCEEEEECCCCchHHHHHhhc-----CCEEEEcCccccHHHHHHHHHHc----CC--CeEEEEeccccCC-CCCCCeeEE
Q 006633 219 IRTAIDTGCGVASWGAYLMSR-----NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRLP-YPSRAFDMA 286 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~-----~v~~vdisp~Dls~a~i~~A~er----g~--~~~~~~~d~~~Lp-fpd~sFDlV 286 (637)
+.+|||+|||+|.++..++++ .++++|+ ++.+++.|+++ +. ++.+...|...++ +.+++||+|
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~-----s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v 97 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDI-----QDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAV 97 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECS-----CHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEE
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEEC-----CHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEE
Confidence 349999999999999999886 3455555 44454444433 33 5788888887776 667899999
Q ss_pred EeccccccCCc-------CCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 287 HCSRCLIPWGQ-------YADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 287 ~~s~~L~h~~~-------~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+++..+.+... ++...++.++.++|||||++++...
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 98 MFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 99875522110 0345799999999999999999864
No 115
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.07 E-value=7.3e-10 Score=117.69 Aligned_cols=98 Identities=12% Similarity=0.120 Sum_probs=74.4
Q ss_pred CEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHcCCC--eEEEEeccccCCCCCCCeeEEEecccccc
Q 006633 220 RTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALERGVP--ALIGVMASIRLPYPSRAFDMAHCSRCLIP 294 (637)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~erg~~--~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h 294 (637)
.+|||||||+|.++..+++++ ++++|+++ .+.. ..+.+...+.. +.+..++...+++++++||+|++..+.++
T Consensus 68 ~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~-a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~ 145 (349)
T 3q7e_A 68 KVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDY-AVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYC 145 (349)
T ss_dssp CEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHH-HHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBT
T ss_pred CEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHH-HHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccccc
Confidence 489999999999999999883 56666652 3322 22333344543 88999999999999999999999765433
Q ss_pred C--CcCCHHHHHHHHHhcccCCeEEEEE
Q 006633 295 W--GQYADGLYLIEVDRVLRPGGYWILS 320 (637)
Q Consensus 295 ~--~~~d~~~~L~ei~RvLKPGG~Lvls 320 (637)
+ .. +...++.++.|+|||||.++..
T Consensus 146 l~~~~-~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 146 LFYES-MLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BTBTC-CHHHHHHHHHHHEEEEEEEESC
T ss_pred ccCch-hHHHHHHHHHHhCCCCCEEccc
Confidence 2 23 7889999999999999999754
No 116
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.07 E-value=1.5e-10 Score=108.03 Aligned_cols=118 Identities=17% Similarity=0.154 Sum_probs=80.0
Q ss_pred cHHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc----CCCeEEEEecccc
Q 006633 200 GADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GVPALIGVMASIR 275 (637)
Q Consensus 200 g~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er----g~~~~~~~~d~~~ 275 (637)
..+...+.+.+.+......+.+|||+|||+|.++..+++++..++.+ |+++.+++.|+++ +.++.+...|...
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~ 99 (171)
T 1ws6_A 23 SPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEGWEAVLV---EKDPEAVRLLKENVRRTGLGARVVALPVEV 99 (171)
T ss_dssp CCHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTTCEEEEE---CCCHHHHHHHHHHHHHHTCCCEEECSCHHH
T ss_pred CHHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCCCeEEEE---eCCHHHHHHHHHHHHHcCCceEEEeccHHH
Confidence 34556666666665321123489999999999999999886544444 4455555555432 3367788777655
Q ss_pred -CC-C--CCCCeeEEEeccccccCCcCCHHHHHHHHH--hcccCCeEEEEEeCCC
Q 006633 276 -LP-Y--PSRAFDMAHCSRCLIPWGQYADGLYLIEVD--RVLRPGGYWILSGPPV 324 (637)
Q Consensus 276 -Lp-f--pd~sFDlV~~s~~L~h~~~~d~~~~L~ei~--RvLKPGG~Lvls~pp~ 324 (637)
++ + ..++||+|+++..++ . +...+++.+. ++|||||.+++..++.
T Consensus 100 ~~~~~~~~~~~~D~i~~~~~~~--~--~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 100 FLPEAKAQGERFTVAFMAPPYA--M--DLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp HHHHHHHTTCCEEEEEECCCTT--S--CTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred HHHhhhccCCceEEEEECCCCc--h--hHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 22 1 134799999988763 2 5566777777 9999999999987643
No 117
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.07 E-value=1.1e-10 Score=126.46 Aligned_cols=122 Identities=14% Similarity=0.048 Sum_probs=88.1
Q ss_pred CCcccHHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc-C---CEEEEcCccccHHHHHH--H----HHHcC--
Q 006633 196 MFPRGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-N---ILAVSFAPRDTHEAQVQ--F----ALERG-- 263 (637)
Q Consensus 196 ~f~~g~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-~---v~~vdisp~Dls~a~i~--~----A~erg-- 263 (637)
.+++.....+..+.+.+.+.++. +|||||||+|.++..++.. + ++++|+++..+..+... . +...+
T Consensus 153 vYGEt~~~~i~~il~~l~l~~gd--~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~ 230 (438)
T 3uwp_A 153 VYGETSFDLVAQMIDEIKMTDDD--LFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK 230 (438)
T ss_dssp GGGGTHHHHHHHHHHHHCCCTTC--EEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC
T ss_pred ccCCCCHHHHHHHHHhcCCCCCC--EEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 35555666777788877766655 9999999999999988864 2 66676655333322221 1 11223
Q ss_pred -CCeEEEEeccccCCCCC--CCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 264 -VPALIGVMASIRLPYPS--RAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 264 -~~~~~~~~d~~~Lpfpd--~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.++.+..+|+..+|+++ ..||+|+++..+ ++. +....|.++.|+|||||.|++..+
T Consensus 231 ~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~-F~p--dl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 231 HAEYTLERGDFLSEEWRERIANTSVIFVNNFA-FGP--EVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp CCEEEEEECCTTSHHHHHHHHTCSEEEECCTT-CCH--HHHHHHHHHHTTSCTTCEEEESSC
T ss_pred CCCeEEEECcccCCccccccCCccEEEEcccc-cCc--hHHHHHHHHHHcCCCCcEEEEeec
Confidence 35889999998888754 479999998765 444 788899999999999999998743
No 118
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.07 E-value=1.9e-09 Score=101.83 Aligned_cols=110 Identities=17% Similarity=0.105 Sum_probs=77.0
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHH----cCC--CeEEEEecccc
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALE----RGV--PALIGVMASIR 275 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~e----rg~--~~~~~~~d~~~ 275 (637)
......+.+.+...++ .+|||+|||+|.++..+++....++.+ |+++.+++.+++ .+. .+.+...+...
T Consensus 19 ~~~~~~~~~~~~~~~~--~~vldiG~G~G~~~~~l~~~~~~v~~~---D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 19 MEVRCLIMCLAEPGKN--DVAVDVGCGTGGVTLELAGRVRRVYAI---DRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE 93 (192)
T ss_dssp HHHHHHHHHHHCCCTT--CEEEEESCTTSHHHHHHHTTSSEEEEE---ESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH
T ss_pred HHHHHHHHHhcCCCCC--CEEEEECCCCCHHHHHHHHhcCEEEEE---ECCHHHHHHHHHHHHHcCCCcceEEEecCHHH
Confidence 4445556666655544 499999999999999999875333333 344444444443 233 57777777655
Q ss_pred CCCCC-CCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 276 LPYPS-RAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 276 Lpfpd-~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++++ ++||+|++...++ +...++.++.++|+|||.+++..+
T Consensus 94 -~~~~~~~~D~v~~~~~~~-----~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 94 -ALCKIPDIDIAVVGGSGG-----ELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp -HHTTSCCEEEEEESCCTT-----CHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred -hcccCCCCCEEEECCchH-----HHHHHHHHHHHhcCCCcEEEEEec
Confidence 3333 5899999987653 567899999999999999999865
No 119
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.06 E-value=4.4e-10 Score=106.52 Aligned_cols=121 Identities=12% Similarity=-0.024 Sum_probs=80.4
Q ss_pred cccHHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHcCC--CeEEEEec
Q 006633 198 PRGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALERGV--PALIGVMA 272 (637)
Q Consensus 198 ~~g~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d 272 (637)
....+.+.+.+.+.+... ..+.+|||+|||+|.++..+++++ ++++|+++..+..+..+.. ..+. .+.+...|
T Consensus 25 rp~~~~~~~~~~~~l~~~-~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~~~~~~~~d 102 (187)
T 2fhp_A 25 RPTTDKVKESIFNMIGPY-FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIA-ITKEPEKFEVRKMD 102 (187)
T ss_dssp CCCCHHHHHHHHHHHCSC-CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH-HHTCGGGEEEEESC
T ss_pred CcCHHHHHHHHHHHHHhh-cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHH-HhCCCcceEEEECc
Confidence 334566677777776421 124499999999999999888764 4555554433332222221 2232 47788887
Q ss_pred cccC----CCCCCCeeEEEeccccccCCcCCHHHHHHHH--HhcccCCeEEEEEeCC
Q 006633 273 SIRL----PYPSRAFDMAHCSRCLIPWGQYADGLYLIEV--DRVLRPGGYWILSGPP 323 (637)
Q Consensus 273 ~~~L----pfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei--~RvLKPGG~Lvls~pp 323 (637)
.... ++++++||+|++...+ +.. +....+..+ .++|||||.+++..+.
T Consensus 103 ~~~~~~~~~~~~~~fD~i~~~~~~-~~~--~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 103 ANRALEQFYEEKLQFDLVLLDPPY-AKQ--EIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCG-GGC--CHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred HHHHHHHHHhcCCCCCEEEECCCC-Cch--hHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 6552 2336789999998775 333 567778888 9999999999998753
No 120
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.06 E-value=7.8e-10 Score=117.10 Aligned_cols=112 Identities=15% Similarity=0.140 Sum_probs=80.3
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHcC--CCeEEEEeccccC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALERG--VPALIGVMASIRL 276 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~erg--~~~~~~~~d~~~L 276 (637)
..+.+.+.+.+...++ .+|||||||+|.++..+++.+ ++++|+++ ++..+ .+.....+ ..+.+..++...+
T Consensus 50 ~~~~~~i~~~~~~~~~--~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a-~~~~~~~~~~~~i~~~~~d~~~~ 125 (340)
T 2fyt_A 50 ESYRDFIYQNPHIFKD--KVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQA-MDIIRLNKLEDTITLIKGKIEEV 125 (340)
T ss_dssp HHHHHHHHHCGGGTTT--CEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHH-HHHHHHTTCTTTEEEEESCTTTS
T ss_pred HHHHHHHHhhhhhcCC--CEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHH-HHHHHHcCCCCcEEEEEeeHHHh
Confidence 3344556655554444 499999999999999999874 56666653 33322 22233334 3588888999999
Q ss_pred CCCCCCeeEEEeccc---cccCCcCCHHHHHHHHHhcccCCeEEEE
Q 006633 277 PYPSRAFDMAHCSRC---LIPWGQYADGLYLIEVDRVLRPGGYWIL 319 (637)
Q Consensus 277 pfpd~sFDlV~~s~~---L~h~~~~d~~~~L~ei~RvLKPGG~Lvl 319 (637)
++++++||+|++..+ +.+ .. +...++.++.|+|||||.++.
T Consensus 126 ~~~~~~~D~Ivs~~~~~~l~~-~~-~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 126 HLPVEKVDVIISEWMGYFLLF-ES-MLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp CCSCSCEEEEEECCCBTTBTT-TC-HHHHHHHHHHHHEEEEEEEES
T ss_pred cCCCCcEEEEEEcCchhhccC-HH-HHHHHHHHHHhhcCCCcEEEc
Confidence 998899999999763 322 22 677899999999999999983
No 121
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.06 E-value=1.2e-09 Score=110.74 Aligned_cols=121 Identities=15% Similarity=0.017 Sum_probs=81.8
Q ss_pred CCCEEEEECCCCchHHHHHhhc--C--CEEEEcCccccHHHHHHHHHHcCC-CeEEEEeccccCCCC---CCCeeEEEec
Q 006633 218 SIRTAIDTGCGVASWGAYLMSR--N--ILAVSFAPRDTHEAQVQFALERGV-PALIGVMASIRLPYP---SRAFDMAHCS 289 (637)
Q Consensus 218 ~~r~VLDIGCGtG~~a~~La~~--~--v~~vdisp~Dls~a~i~~A~erg~-~~~~~~~d~~~Lpfp---d~sFDlV~~s 289 (637)
.+.+|||||||+|..+..|+.. + ++++|+++..+..+.... .+.+. ++.+..++...++.. +++||+|++.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~-~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAI-EVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHH-HHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 3559999999999999988865 3 555555443333222221 22344 588888888877653 4899999996
Q ss_pred cccccCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHhceeeec
Q 006633 290 RCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKKLI 360 (637)
Q Consensus 290 ~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w~~v~ 360 (637)
.+ . +...+++++.++|||||+|++.... .. .++...+....+.++++...
T Consensus 159 a~----~--~~~~ll~~~~~~LkpgG~l~~~~g~-----------~~----~~e~~~~~~~l~~~G~~~~~ 208 (249)
T 3g89_A 159 AV----A--PLCVLSELLLPFLEVGGAAVAMKGP-----------RV----EEELAPLPPALERLGGRLGE 208 (249)
T ss_dssp SS----C--CHHHHHHHHGGGEEEEEEEEEEECS-----------CC----HHHHTTHHHHHHHHTEEEEE
T ss_pred Cc----C--CHHHHHHHHHHHcCCCeEEEEEeCC-----------Cc----HHHHHHHHHHHHHcCCeEEE
Confidence 43 2 6788999999999999999886421 11 12344566667777876543
No 122
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.05 E-value=8.2e-10 Score=117.04 Aligned_cols=112 Identities=18% Similarity=0.234 Sum_probs=82.6
Q ss_pred HHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--C--CEEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccCCC
Q 006633 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--N--ILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRLPY 278 (637)
Q Consensus 205 i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~--v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~Lpf 278 (637)
.+.+.+.++..+ ..+|||||||+|.++..++++ + ++++|+ +..+..+..+.. +.+. .+.+...|....++
T Consensus 179 ~~~l~~~~~~~~--~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~-~~~~~~~v~~~~~d~~~~~~ 254 (359)
T 1x19_A 179 IQLLLEEAKLDG--VKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAA-EKGVADRMRGIAVDIYKESY 254 (359)
T ss_dssp HHHHHHHCCCTT--CCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHH-HTTCTTTEEEEECCTTTSCC
T ss_pred HHHHHHhcCCCC--CCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHH-hcCCCCCEEEEeCccccCCC
Confidence 344555554433 459999999999999999886 3 466666 544444433332 2233 38888889888777
Q ss_pred CCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 279 PSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 279 pd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++. |+|++..++++|.+++...+++++.++|||||.+++..+
T Consensus 255 ~~~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 255 PEA--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp CCC--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred CCC--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 654 999999999999853478899999999999999988763
No 123
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.05 E-value=1.5e-09 Score=108.41 Aligned_cols=105 Identities=14% Similarity=0.159 Sum_probs=78.2
Q ss_pred HHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc---CCEEEEcCccccHHHHHHHHHHc-----C-CCeEEEEeccccC
Q 006633 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER-----G-VPALIGVMASIRL 276 (637)
Q Consensus 206 ~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~---~v~~vdisp~Dls~a~i~~A~er-----g-~~~~~~~~d~~~L 276 (637)
..+.+.+...++. +|||+|||+|.++..+++. +..++.+ |+++.+++.|+++ + ..+.+...|....
T Consensus 86 ~~~~~~~~~~~~~--~vLdiG~G~G~~~~~l~~~~~~~~~v~~~---D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~ 160 (258)
T 2pwy_A 86 SAMVTLLDLAPGM--RVLEAGTGSGGLTLFLARAVGEKGLVESY---EARPHHLAQAERNVRAFWQVENVRFHLGKLEEA 160 (258)
T ss_dssp HHHHHHTTCCTTC--EEEEECCTTSHHHHHHHHHHCTTSEEEEE---ESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC
T ss_pred HHHHHHcCCCCCC--EEEEECCCcCHHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc
Confidence 4555666555544 9999999999999999876 3344444 4444454444433 3 4578888888888
Q ss_pred CCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 277 PYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 277 pfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++++++||+|++. +. +...++.++.++|||||.+++..+
T Consensus 161 ~~~~~~~D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 161 ELEEAAYDGVALD-----LM--EPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp CCCTTCEEEEEEE-----SS--CGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCCCcCEEEEC-----Cc--CHHHHHHHHHHhCCCCCEEEEEeC
Confidence 8888899999983 33 566899999999999999999876
No 124
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.04 E-value=4e-10 Score=106.76 Aligned_cols=113 Identities=14% Similarity=0.033 Sum_probs=83.6
Q ss_pred CCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCC-CeEEEEeccccCCC---CCCCeeEEEeccccc
Q 006633 218 SIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGV-PALIGVMASIRLPY---PSRAFDMAHCSRCLI 293 (637)
Q Consensus 218 ~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~-~~~~~~~d~~~Lpf---pd~sFDlV~~s~~L~ 293 (637)
.+.+|||||||. + . .|+++.+++.|+++.. .+.+..++...+++ ++++||+|+|+.+++
T Consensus 12 ~g~~vL~~~~g~-----------v---~---vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~ 74 (176)
T 2ld4_A 12 AGQFVAVVWDKS-----------S---P---VEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPG 74 (176)
T ss_dssp TTSEEEEEECTT-----------S---C---HHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTT
T ss_pred CCCEEEEecCCc-----------e---e---eeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhh
Confidence 355999999996 1 1 3889999998887742 47888889888887 889999999999997
Q ss_pred cCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHhce
Q 006633 294 PWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCW 356 (637)
Q Consensus 294 h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w 356 (637)
|+.. +...+++++.|+|||||+|++..|....... ..|..+ .+++....+..+|
T Consensus 75 ~~~~-~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~-~~~~~~-------~~~~~~~l~~aGf 128 (176)
T 2ld4_A 75 STTL-HSAEILAEIARILRPGGCLFLKEPVETAVDN-NSKVKT-------ASKLCSALTLSGL 128 (176)
T ss_dssp CCCC-CCHHHHHHHHHHEEEEEEEEEEEEEESSSCS-SSSSCC-------HHHHHHHHHHTTC
T ss_pred hccc-CHHHHHHHHHHHCCCCEEEEEEccccccccc-ccccCC-------HHHHHHHHHHCCC
Confidence 7734 7899999999999999999997652221110 112222 2345666777777
No 125
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.04 E-value=3.1e-09 Score=108.50 Aligned_cols=115 Identities=14% Similarity=0.126 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHc----CC-CeEEEEecc
Q 006633 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV-PALIGVMAS 273 (637)
Q Consensus 201 ~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~er----g~-~~~~~~~d~ 273 (637)
.+..++.+.+.++ . ...+|||+|||+|.++..+++. +..++.+ |+++.+++.|+++ +. ++.+...|.
T Consensus 95 te~l~~~~l~~~~-~--~~~~vLDlG~GsG~~~~~la~~~~~~~v~~v---D~s~~~l~~a~~n~~~~~~~~v~~~~~d~ 168 (276)
T 2b3t_A 95 TECLVEQALARLP-E--QPCRILDLGTGTGAIALALASERPDCEIIAV---DRMPDAVSLAQRNAQHLAIKNIHILQSDW 168 (276)
T ss_dssp HHHHHHHHHHHSC-S--SCCEEEEETCTTSHHHHHHHHHCTTSEEEEE---CSSHHHHHHHHHHHHHHTCCSEEEECCST
T ss_pred HHHHHHHHHHhcc-c--CCCEEEEecCCccHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCceEEEEcch
Confidence 4556666666654 2 2348999999999999999865 3334444 4444555544432 43 478887776
Q ss_pred ccCCCCCCCeeEEEeccccccC-------------Cc----------CCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 274 IRLPYPSRAFDMAHCSRCLIPW-------------GQ----------YADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 274 ~~Lpfpd~sFDlV~~s~~L~h~-------------~~----------~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.. ++++++||+|+++..++.. +. +....++.++.++|||||++++..+
T Consensus 169 ~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~ 239 (276)
T 2b3t_A 169 FS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG 239 (276)
T ss_dssp TG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred hh-hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 55 3446789999998544222 10 1346789999999999999999853
No 126
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.04 E-value=9.6e-10 Score=114.52 Aligned_cols=101 Identities=11% Similarity=0.071 Sum_probs=72.2
Q ss_pred HHhcccCCCCCEEEEECCCCchHHHH-Hhhc-CCEEEEcCccccHHHHHHHHHHc----C-CCeEEEEeccccCCCCCCC
Q 006633 210 KLINLKDGSIRTAIDTGCGVASWGAY-LMSR-NILAVSFAPRDTHEAQVQFALER----G-VPALIGVMASIRLPYPSRA 282 (637)
Q Consensus 210 ~lL~~~~g~~r~VLDIGCGtG~~a~~-La~~-~v~~vdisp~Dls~a~i~~A~er----g-~~~~~~~~d~~~Lpfpd~s 282 (637)
.++.+.++. +|||||||+|.+++. +++. +..++.+ |+++.+++.|+++ + .++.+..+|+..+| +++
T Consensus 116 ~la~l~~g~--rVLDIGcG~G~~ta~~lA~~~ga~V~gI---Dis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~ 188 (298)
T 3fpf_A 116 ALGRFRRGE--RAVFIGGGPLPLTGILLSHVYGMRVNVV---EIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLE 188 (298)
T ss_dssp HHTTCCTTC--EEEEECCCSSCHHHHHHHHTTCCEEEEE---ESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCC
T ss_pred HHcCCCCcC--EEEEECCCccHHHHHHHHHccCCEEEEE---ECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCC
Confidence 344555544 999999999987654 4442 4444444 4445555555433 4 36888888888875 789
Q ss_pred eeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 283 FDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 283 FDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
||+|++... .+ +...+++++.|+|||||.|++...
T Consensus 189 FDvV~~~a~----~~-d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 189 FDVLMVAAL----AE-PKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp CSEEEECTT----CS-CHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred cCEEEECCC----cc-CHHHHHHHHHHHcCCCcEEEEEcC
Confidence 999998653 23 889999999999999999999863
No 127
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.04 E-value=8.2e-10 Score=107.82 Aligned_cols=114 Identities=11% Similarity=0.039 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHhccc-CCCCCEEEEECCCCchHHHHHhhcCC-EEEEcCccccHHHHHHHHHH----cCC-CeEEEEecc
Q 006633 201 ADAYIDDIGKLINLK-DGSIRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALE----RGV-PALIGVMAS 273 (637)
Q Consensus 201 ~~~~i~~L~~lL~~~-~g~~r~VLDIGCGtG~~a~~La~~~v-~~vdisp~Dls~a~i~~A~e----rg~-~~~~~~~d~ 273 (637)
.+...+.+.+.+... .+ .+|||+|||+|.++..++.++. .++.+ |+++.+++.|++ .+. ++.+...|.
T Consensus 38 ~~~~~~~l~~~l~~~~~~--~~vLDlgcG~G~~~~~l~~~~~~~V~~v---D~s~~~l~~a~~~~~~~~~~~v~~~~~D~ 112 (202)
T 2fpo_A 38 TDRVRETLFNWLAPVIVD--AQCLDCFAGSGALGLEALSRYAAGATLI---EMDRAVSQQLIKNLATLKAGNARVVNSNA 112 (202)
T ss_dssp CHHHHHHHHHHHHHHHTT--CEEEETTCTTCHHHHHHHHTTCSEEEEE---CSCHHHHHHHHHHHHHTTCCSEEEECSCH
T ss_pred HHHHHHHHHHHHHhhcCC--CeEEEeCCCcCHHHHHHHhcCCCEEEEE---ECCHHHHHHHHHHHHHcCCCcEEEEECCH
Confidence 455556666666532 33 4899999999999998777642 33444 444455554443 333 678888887
Q ss_pred cc-CCCCCCCeeEEEeccccccCCcCCHHHHHHHHHh--cccCCeEEEEEeC
Q 006633 274 IR-LPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDR--VLRPGGYWILSGP 322 (637)
Q Consensus 274 ~~-Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~R--vLKPGG~Lvls~p 322 (637)
.. ++..+++||+|++...+ +.. +...++.++.+ +|||||.++++..
T Consensus 113 ~~~~~~~~~~fD~V~~~~p~-~~~--~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 113 MSFLAQKGTPHNIVFVDPPF-RRG--LLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp HHHHSSCCCCEEEEEECCSS-STT--THHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHHHhhcCCCCCEEEECCCC-CCC--cHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 66 56667899999998765 433 67788888865 6999999999865
No 128
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.03 E-value=3e-10 Score=122.11 Aligned_cols=121 Identities=13% Similarity=0.083 Sum_probs=81.3
Q ss_pred CCcccHHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHH----cCC----C
Q 006633 196 MFPRGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALE----RGV----P 265 (637)
Q Consensus 196 ~f~~g~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~e----rg~----~ 265 (637)
+...+.+.-.+.+.+.++...+ .+|||+|||+|.++..++++ +..++.+ |+++.+++.+++ .+. .
T Consensus 202 Fs~~~~d~~~~~ll~~l~~~~~--~~VLDlGcG~G~~s~~la~~~p~~~V~gv---D~s~~al~~Ar~n~~~ngl~~~~~ 276 (375)
T 4dcm_A 202 FSRTGLDIGARFFMQHLPENLE--GEIVDLGCGNGVIGLTLLDKNPQAKVVFV---DESPMAVASSRLNVETNMPEALDR 276 (375)
T ss_dssp TTCSSCCHHHHHHHHTCCCSCC--SEEEEETCTTCHHHHHHHHHCTTCEEEEE---ESCHHHHHHHHHHHHHHCGGGGGG
T ss_pred ccCCcccHHHHHHHHhCcccCC--CeEEEEeCcchHHHHHHHHHCCCCEEEEE---ECcHHHHHHHHHHHHHcCCCcCce
Confidence 3333445545556666655443 59999999999999999987 3333333 334444444432 232 3
Q ss_pred eEEEEeccccCCCCCCCeeEEEeccccccC---CcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 266 ALIGVMASIRLPYPSRAFDMAHCSRCLIPW---GQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 266 ~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~---~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+.+...|... ++++++||+|+++..+++. .......++.++.++|||||.++++.+
T Consensus 277 v~~~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 277 CEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp EEEEECSTTT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEechhhc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 6777777765 5678899999999888542 121234689999999999999999864
No 129
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.03 E-value=6.9e-10 Score=102.99 Aligned_cols=91 Identities=19% Similarity=0.175 Sum_probs=70.7
Q ss_pred CCEEEEECCCCchHHHHHhhc-----CCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCC--------CCCCCeeE
Q 006633 219 IRTAIDTGCGVASWGAYLMSR-----NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLP--------YPSRAFDM 285 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~-----~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lp--------fpd~sFDl 285 (637)
+.+|||+|||+|.++..+++. .++++|+++ ... ...+.+...|...++ +++++||+
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~ 91 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP----------IVGVDFLQGDFRDELVMKALLERVGDSKVQV 91 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC----------CTTEEEEESCTTSHHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc----------cCcEEEEEcccccchhhhhhhccCCCCceeE
Confidence 349999999999999998876 355666655 321 145777888887776 77889999
Q ss_pred EEeccccccCCcCCH-----------HHHHHHHHhcccCCeEEEEEeC
Q 006633 286 AHCSRCLIPWGQYAD-----------GLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 286 V~~s~~L~h~~~~d~-----------~~~L~ei~RvLKPGG~Lvls~p 322 (637)
|+++..+++.. +. ..++.++.++|||||.+++..+
T Consensus 92 i~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 92 VMSDMAPNMSG--TPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp EEECCCCCCCS--CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEECCCccccC--CCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 99988874433 33 6899999999999999999865
No 130
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.02 E-value=2.9e-10 Score=107.55 Aligned_cols=114 Identities=12% Similarity=0.032 Sum_probs=77.1
Q ss_pred HHHHHHHHHHhc-ccCCCCCEEEEECCCCchHHHHHhhcC-CEEEEcCccccHHHHHHHHHHc----CC--CeEEEEecc
Q 006633 202 DAYIDDIGKLIN-LKDGSIRTAIDTGCGVASWGAYLMSRN-ILAVSFAPRDTHEAQVQFALER----GV--PALIGVMAS 273 (637)
Q Consensus 202 ~~~i~~L~~lL~-~~~g~~r~VLDIGCGtG~~a~~La~~~-v~~vdisp~Dls~a~i~~A~er----g~--~~~~~~~d~ 273 (637)
+...+.+.+.+. ... +.+|||+|||+|.++..+++++ ..++.+ |+++.+++.|+++ +. .+.+...|.
T Consensus 16 ~~~~~~~~~~l~~~~~--~~~vLDlGcG~G~~~~~l~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~ 90 (177)
T 2esr_A 16 DKVRGAIFNMIGPYFN--GGRVLDLFAGSGGLAIEAVSRGMSAAVLV---EKNRKAQAIIQDNIIMTKAENRFTLLKMEA 90 (177)
T ss_dssp --CHHHHHHHHCSCCC--SCEEEEETCTTCHHHHHHHHTTCCEEEEE---CCCHHHHHHHHHHHHTTTCGGGEEEECSCH
T ss_pred HHHHHHHHHHHHhhcC--CCeEEEeCCCCCHHHHHHHHcCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCceEEEECcH
Confidence 344555656654 233 3499999999999999999874 244444 4555555555432 33 377877776
Q ss_pred cc-CCCCCCCeeEEEeccccccCCcCCHHHHHHHHH--hcccCCeEEEEEeCC
Q 006633 274 IR-LPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVD--RVLRPGGYWILSGPP 323 (637)
Q Consensus 274 ~~-Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~--RvLKPGG~Lvls~pp 323 (637)
.. ++..++.||+|+++..+ +.. .....+..+. ++|||||.+++..+.
T Consensus 91 ~~~~~~~~~~fD~i~~~~~~-~~~--~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 91 ERAIDCLTGRFDLVFLDPPY-AKE--TIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp HHHHHHBCSCEEEEEECCSS-HHH--HHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred HHhHHhhcCCCCEEEECCCC-Ccc--hHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 65 34445679999998765 222 4566777777 999999999998753
No 131
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.01 E-value=1.3e-09 Score=115.32 Aligned_cols=107 Identities=16% Similarity=0.137 Sum_probs=76.4
Q ss_pred HHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHH--Hc--CCCeEEEEeccccCCCCC
Q 006633 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFAL--ER--GVPALIGVMASIRLPYPS 280 (637)
Q Consensus 207 ~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~--er--g~~~~~~~~d~~~Lpfpd 280 (637)
.+.+.++..+ ..+|||||||+|.++..++++ ++.++.+ |+..... .+. +. ...+.+...|.. .++|
T Consensus 175 ~~~~~~~~~~--~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~---D~~~~~~-~~~~~~~~~~~~v~~~~~d~~-~~~p- 246 (348)
T 3lst_A 175 ILARAGDFPA--TGTVADVGGGRGGFLLTVLREHPGLQGVLL---DRAEVVA-RHRLDAPDVAGRWKVVEGDFL-REVP- 246 (348)
T ss_dssp HHHHHSCCCS--SEEEEEETCTTSHHHHHHHHHCTTEEEEEE---ECHHHHT-TCCCCCGGGTTSEEEEECCTT-TCCC-
T ss_pred HHHHhCCccC--CceEEEECCccCHHHHHHHHHCCCCEEEEe---cCHHHhh-cccccccCCCCCeEEEecCCC-CCCC-
Confidence 3444444433 459999999999999999885 4555555 5443222 111 01 124788888875 4555
Q ss_pred CCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 281 RAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 281 ~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+||+|++..+++||.+++...+|+++.++|||||+|++...
T Consensus 247 -~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~ 287 (348)
T 3lst_A 247 -HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDA 287 (348)
T ss_dssp -CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEEC
T ss_pred -CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 89999999999999852337999999999999999999864
No 132
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.01 E-value=1.5e-09 Score=107.09 Aligned_cols=96 Identities=10% Similarity=0.041 Sum_probs=67.4
Q ss_pred CCEEEEECCCCchHHHHHhhc----CCEEEEcCccccHHHHHHHHHHcCCCeEEEEecccc----CCCCCCCeeEEEecc
Q 006633 219 IRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIR----LPYPSRAFDMAHCSR 290 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~----~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~----Lpfpd~sFDlV~~s~ 290 (637)
+.+|||+|||+|.++..|++. .++++|+++.++. .+.+.|.++ .++.+...|... .+++ ++||+|+++.
T Consensus 58 g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~-~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~ 134 (210)
T 1nt2_A 58 DERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFE-KLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQDI 134 (210)
T ss_dssp SCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHH-HHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEECC
T ss_pred CCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHH-HHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEEec
Confidence 449999999999999998875 2566666543322 234455444 356677777655 3454 7899999973
Q ss_pred ccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 291 CLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 291 ~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
. .+. +...++.++.|+|||||.|+++.
T Consensus 135 -~--~~~-~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 135 -A--QKN-QIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp -C--STT-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -c--Chh-HHHHHHHHHHHHhCCCCEEEEEE
Confidence 2 122 35566999999999999999985
No 133
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.01 E-value=8.9e-10 Score=116.94 Aligned_cols=108 Identities=19% Similarity=0.252 Sum_probs=78.9
Q ss_pred HHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHH----cCC--CeEEEEeccccCCC
Q 006633 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALE----RGV--PALIGVMASIRLPY 278 (637)
Q Consensus 207 ~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~e----rg~--~~~~~~~d~~~Lpf 278 (637)
.+.+.++... ..+|||||||+|.++..++++ ++.++.+ |+ +.+++.|++ .+. .+.+...|... ++
T Consensus 173 ~~~~~~~~~~--~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~---D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~ 245 (374)
T 1qzz_A 173 APADAYDWSA--VRHVLDVGGGNGGMLAAIALRAPHLRGTLV---EL-AGPAERARRRFADAGLADRVTVAEGDFFK-PL 245 (374)
T ss_dssp HHHHTSCCTT--CCEEEEETCTTSHHHHHHHHHCTTCEEEEE---EC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CC
T ss_pred HHHHhCCCCC--CCEEEEECCCcCHHHHHHHHHCCCCEEEEE---eC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cC
Confidence 3444444333 459999999999999999887 4555555 55 555555543 233 47888888754 44
Q ss_pred CCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 279 PSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 279 pd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+. .||+|++..+++||.+++...+++++.++|||||++++..+
T Consensus 246 ~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 246 PV-TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp SC-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CC-CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 44 39999999999888842335899999999999999999765
No 134
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.00 E-value=1.8e-09 Score=105.24 Aligned_cols=105 Identities=18% Similarity=0.164 Sum_probs=74.0
Q ss_pred HHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHc----C-CCeEEEEecccc
Q 006633 204 YIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALER----G-VPALIGVMASIR 275 (637)
Q Consensus 204 ~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~er----g-~~~~~~~~d~~~ 275 (637)
....+.+.+...++ .+|||||||+|.++..+++.. ..++.+ |+++.+++.++++ + .++.+...+...
T Consensus 65 ~~~~~~~~~~~~~~--~~vLdiG~G~G~~~~~l~~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 139 (215)
T 2yxe_A 65 MVGMMCELLDLKPG--MKVLEIGTGCGYHAAVTAEIVGEDGLVVSI---ERIPELAEKAERTLRKLGYDNVIVIVGDGTL 139 (215)
T ss_dssp HHHHHHHHTTCCTT--CEEEEECCTTSHHHHHHHHHHCTTSEEEEE---ESCHHHHHHHHHHHHHHTCTTEEEEESCGGG
T ss_pred HHHHHHHhhCCCCC--CEEEEECCCccHHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHcCCCCeEEEECCccc
Confidence 44556666655544 499999999999999998763 344444 4444455444432 3 347777777643
Q ss_pred CCCC-CCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 276 LPYP-SRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 276 Lpfp-d~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+++ +++||+|++..+++|+. .++.++|||||.+++..+
T Consensus 140 -~~~~~~~fD~v~~~~~~~~~~--------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 140 -GYEPLAPYDRIYTTAAGPKIP--------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp -CCGGGCCEEEEEESSBBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred -CCCCCCCeeEEEECCchHHHH--------HHHHHHcCCCcEEEEEEC
Confidence 333 67899999999986655 488999999999999876
No 135
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.00 E-value=2.3e-09 Score=113.78 Aligned_cols=115 Identities=12% Similarity=0.086 Sum_probs=83.9
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRL 276 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~L 276 (637)
..+.+.+.+.+...++ .+|||||||+|.++..+++++ ++++|+++ +.. ...+.....+. .+.+...+...+
T Consensus 36 ~~y~~~i~~~l~~~~~--~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~-~a~~~~~~~~l~~~v~~~~~d~~~~ 111 (348)
T 2y1w_A 36 GTYQRAILQNHTDFKD--KIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQ-HAEVLVKSNNLTDRIVVIPGKVEEV 111 (348)
T ss_dssp HHHHHHHHHTGGGTTT--CEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHH-HHHHHHHHTTCTTTEEEEESCTTTC
T ss_pred HHHHHHHHhccccCCc--CEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHH-HHHHHHHHcCCCCcEEEEEcchhhC
Confidence 4455666666655444 499999999999999998874 56666653 322 22223333443 588888888888
Q ss_pred CCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 277 PYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 277 pfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+++ ++||+|++..+++|+..++....+.++.++|||||.+++..
T Consensus 112 ~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 112 SLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp CCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred CCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 766 67999999988888875467788899999999999998653
No 136
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.00 E-value=2.8e-09 Score=108.24 Aligned_cols=106 Identities=18% Similarity=0.159 Sum_probs=78.5
Q ss_pred HHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc---CCEEEEcCccccHHHHHHHHHHc-----C---CCeEEEEecc
Q 006633 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER-----G---VPALIGVMAS 273 (637)
Q Consensus 205 i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~---~v~~vdisp~Dls~a~i~~A~er-----g---~~~~~~~~d~ 273 (637)
+..+.+.+...++. +|||+|||+|.++..|++. +..++.+ |+++.+++.|+++ + .++.+...|.
T Consensus 88 ~~~i~~~~~~~~~~--~vLdiG~G~G~~~~~l~~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~ 162 (280)
T 1i9g_A 88 AAQIVHEGDIFPGA--RVLEAGAGSGALTLSLLRAVGPAGQVISY---EQRADHAEHARRNVSGCYGQPPDNWRLVVSDL 162 (280)
T ss_dssp HHHHHHHTTCCTTC--EEEEECCTTSHHHHHHHHHHCTTSEEEEE---CSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG
T ss_pred HHHHHHHcCCCCCC--EEEEEcccccHHHHHHHHHhCCCCEEEEE---eCCHHHHHHHHHHHHHhcCCCCCcEEEEECch
Confidence 34555666555544 9999999999999999875 4444444 4444454444432 2 3688888898
Q ss_pred ccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 274 IRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 274 ~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
...++++++||+|++. .. ++..++.++.++|||||.+++..+
T Consensus 163 ~~~~~~~~~~D~v~~~-----~~--~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 163 ADSELPDGSVDRAVLD-----ML--APWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp GGCCCCTTCEEEEEEE-----SS--CGGGGHHHHHHHEEEEEEEEEEES
T ss_pred HhcCCCCCceeEEEEC-----Cc--CHHHHHHHHHHhCCCCCEEEEEeC
Confidence 8888888899999983 23 566799999999999999999876
No 137
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.00 E-value=1.7e-09 Score=113.07 Aligned_cols=112 Identities=13% Similarity=0.112 Sum_probs=82.2
Q ss_pred HHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc----CCEEEEcCccccHHHHHHHHHHc-CCCeEEEEeccccCCCC
Q 006633 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFALER-GVPALIGVMASIRLPYP 279 (637)
Q Consensus 205 i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~----~v~~vdisp~Dls~a~i~~A~er-g~~~~~~~~d~~~Lpfp 279 (637)
...+.+.++..+ .+|||||||+|.++..++++ .++++|+ +..+..+........ ...+.+...|... +++
T Consensus 157 ~~~~~~~~~~~~---~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~ 231 (334)
T 2ip2_A 157 FHEIPRLLDFRG---RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP 231 (334)
T ss_dssp HHHHHHHSCCTT---CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC
T ss_pred HHHHHHhCCCCC---CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC
Confidence 344444444333 59999999999999999876 3667777 666655444332221 2357888888766 565
Q ss_pred CCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 280 SRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 280 d~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++||+|++..+++||.+++...+++++.++|||||++++..+
T Consensus 232 -~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 232 -SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp -SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred -CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 679999999999989853445999999999999999999864
No 138
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.00 E-value=9.2e-10 Score=110.62 Aligned_cols=103 Identities=18% Similarity=0.131 Sum_probs=69.9
Q ss_pred CCEEEEECCCCchHHHHHhhc--C--CEEEEcCccccHHHHHHHHH-----HcC-CCeEEEEecccc-CC--CCCCCeeE
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--N--ILAVSFAPRDTHEAQVQFAL-----ERG-VPALIGVMASIR-LP--YPSRAFDM 285 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~--v~~vdisp~Dls~a~i~~A~-----erg-~~~~~~~~d~~~-Lp--fpd~sFDl 285 (637)
..+|||||||+|.++..|++. + ++++|+++.++..+..+... ..+ .++.+..+|+.. ++ +++++||.
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~ 126 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTK 126 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEE
T ss_pred CCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeE
Confidence 348999999999999999986 3 45555544333332222111 022 368888888876 66 78899999
Q ss_pred EEeccccccCCcC-------CHHHHHHHHHhcccCCeEEEEEeC
Q 006633 286 AHCSRCLIPWGQY-------ADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 286 V~~s~~L~h~~~~-------d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
|++...- +|... ....+++++.++|||||.|++...
T Consensus 127 v~~~~~d-p~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td 169 (235)
T 3ckk_A 127 MFFLFPD-PHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITD 169 (235)
T ss_dssp EEEESCC------------CCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEeCCC-chhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC
Confidence 9876533 44310 014799999999999999999854
No 139
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.00 E-value=7.6e-10 Score=118.26 Aligned_cols=96 Identities=18% Similarity=0.117 Sum_probs=76.9
Q ss_pred CCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccCC
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWG 296 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~ 296 (637)
..+|||||||+|.++..|+++ ++.++.+ |+ +.+++.+.+. ..+.+..+|... |++.+ |+|++..++|||.
T Consensus 204 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~ 275 (368)
T 3reo_A 204 LTTIVDVGGGTGAVASMIVAKYPSINAINF---DL-PHVIQDAPAF-SGVEHLGGDMFD-GVPKG--DAIFIKWICHDWS 275 (368)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEE---EC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGBC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEE---eh-HHHHHhhhhc-CCCEEEecCCCC-CCCCC--CEEEEechhhcCC
Confidence 469999999999999999886 5666666 55 4566555433 468888888776 77754 9999999999998
Q ss_pred cCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 297 QYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 297 ~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+++...+|+++.++|||||++++...
T Consensus 276 ~~~~~~~l~~~~~~L~pgG~l~i~e~ 301 (368)
T 3reo_A 276 DEHCLKLLKNCYAALPDHGKVIVAEY 301 (368)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 64456899999999999999999864
No 140
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.99 E-value=1.5e-09 Score=113.52 Aligned_cols=105 Identities=12% Similarity=0.111 Sum_probs=78.1
Q ss_pred HHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--C---CEEEEcCccccHHHHHHHHHH----cCC-CeEEEEec
Q 006633 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--N---ILAVSFAPRDTHEAQVQFALE----RGV-PALIGVMA 272 (637)
Q Consensus 203 ~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~---v~~vdisp~Dls~a~i~~A~e----rg~-~~~~~~~d 272 (637)
...+.+.+.+...++. +|||||||+|.++..+++. . ++++|+++ .+++.|++ .+. ++.+...|
T Consensus 62 ~~~~~l~~~l~~~~~~--~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~-----~~~~~a~~~~~~~g~~~v~~~~~d 134 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGM--RVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSR-----KICEIAKRNVERLGIENVIFVCGD 134 (317)
T ss_dssp HHHHHHHHHTTCCTTC--EEEEECCTTSHHHHHHHHHHCTTCEEEEEESCH-----HHHHHHHHHHHHTTCCSEEEEESC
T ss_pred HHHHHHHHhcCCCCcC--EEEEecCCchHHHHHHHHhcCCCCEEEEEECCH-----HHHHHHHHHHHHcCCCCeEEEECC
Confidence 4455666676655544 9999999999999999876 2 66666654 44444433 243 47888888
Q ss_pred cccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 273 SIRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 273 ~~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
....+.++++||+|++..+++|+. .++.++|||||.+++...
T Consensus 135 ~~~~~~~~~~fD~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 135 GYYGVPEFSPYDVIFVTVGVDEVP--------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp GGGCCGGGCCEEEEEECSBBSCCC--------HHHHHHEEEEEEEEEEBC
T ss_pred hhhccccCCCeEEEEEcCCHHHHH--------HHHHHhcCCCcEEEEEEC
Confidence 877655678899999999987665 578899999999999854
No 141
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.99 E-value=2.2e-09 Score=110.35 Aligned_cols=143 Identities=10% Similarity=0.017 Sum_probs=90.6
Q ss_pred CCCcccHHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHcCCC--eEEE
Q 006633 195 TMFPRGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALERGVP--ALIG 269 (637)
Q Consensus 195 ~~f~~g~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~erg~~--~~~~ 269 (637)
.+|..........+.+.+ .+ +.+|||+|||+|.++..+++.+ ++++|+++..+..+..+ +..++.. +.+.
T Consensus 106 ~~f~~~~~~~~~~l~~~~--~~--~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n-~~~n~~~~~v~~~ 180 (278)
T 2frn_A 106 IMFSPANVKERVRMAKVA--KP--DELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVEN-IHLNKVEDRMSAY 180 (278)
T ss_dssp SCCCGGGHHHHHHHHHHC--CT--TCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHH-HHHTTCTTTEEEE
T ss_pred eeEcCCcHHHHHHHHHhC--CC--CCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHH-HHHcCCCceEEEE
Confidence 334344334444555543 23 3499999999999999999874 45555544333322222 2223443 7788
Q ss_pred EeccccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHH
Q 006633 270 VMASIRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIET 349 (637)
Q Consensus 270 ~~d~~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~ 349 (637)
.+|...++. +++||+|++.... ....++.++.++|||||.+++...... ........+.+..
T Consensus 181 ~~D~~~~~~-~~~fD~Vi~~~p~------~~~~~l~~~~~~LkpgG~l~~~~~~~~-----------~~~~~~~~~~i~~ 242 (278)
T 2frn_A 181 NMDNRDFPG-ENIADRILMGYVV------RTHEFIPKALSIAKDGAIIHYHNTVPE-----------KLMPREPFETFKR 242 (278)
T ss_dssp CSCTTTCCC-CSCEEEEEECCCS------SGGGGHHHHHHHEEEEEEEEEEEEEEG-----------GGTTTTTHHHHHH
T ss_pred ECCHHHhcc-cCCccEEEECCch------hHHHHHHHHHHHCCCCeEEEEEEeecc-----------ccccccHHHHHHH
Confidence 888888776 7889999986432 456789999999999999999754110 0000122345677
Q ss_pred HHHHhceeeec
Q 006633 350 IARSLCWKKLI 360 (637)
Q Consensus 350 la~~l~w~~v~ 360 (637)
.++..+|+...
T Consensus 243 ~~~~~G~~~~~ 253 (278)
T 2frn_A 243 ITKEYGYDVEK 253 (278)
T ss_dssp HHHHTTCEEEE
T ss_pred HHHHcCCeeEE
Confidence 78888886543
No 142
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.99 E-value=8.7e-10 Score=117.61 Aligned_cols=95 Identities=19% Similarity=0.160 Sum_probs=75.7
Q ss_pred CCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccCC
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWG 296 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~ 296 (637)
..+|||||||+|.++..|+++ ++.++.+ |+ +.+++.|++. ..+.+...|... +++. ||+|++..+++||.
T Consensus 210 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~---D~-~~~~~~a~~~-~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~ 281 (372)
T 1fp1_D 210 ISTLVDVGGGSGRNLELIISKYPLIKGINF---DL-PQVIENAPPL-SGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWS 281 (372)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEE---EC-HHHHTTCCCC-TTEEEEECCTTT-CCCC--EEEEEEESSGGGSC
T ss_pred CCEEEEeCCCCcHHHHHHHHHCCCCeEEEe---Ch-HHHHHhhhhc-CCCEEEeCCccc-CCCC--CCEEEEecccccCC
Confidence 459999999999999999987 5666666 66 5666655442 458888888766 6665 99999999999898
Q ss_pred cCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 297 QYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 297 ~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+++...+|+++.++|||||.|++..
T Consensus 282 d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 282 DEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 4222399999999999999999985
No 143
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.99 E-value=2.5e-10 Score=110.17 Aligned_cols=114 Identities=16% Similarity=0.120 Sum_probs=67.4
Q ss_pred HHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--C--CEEEEcCccccHHHHHHHHHHc----CCCeEEEEec
Q 006633 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--N--ILAVSFAPRDTHEAQVQFALER----GVPALIGVMA 272 (637)
Q Consensus 201 ~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~--v~~vdisp~Dls~a~i~~A~er----g~~~~~~~~d 272 (637)
.+..++.+.+.+... ..+.+|||+|||+|.++..++++ + ++++|+++. +++.|+++ +.++.+...|
T Consensus 14 ~~~~~~~~~~~l~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~-----~~~~a~~~~~~~~~~~~~~~~d 87 (215)
T 4dzr_A 14 TEVLVEEAIRFLKRM-PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMD-----ALAVARRNAERFGAVVDWAAAD 87 (215)
T ss_dssp HHHHHHHHHHHHTTC-CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC------------------------CCHHH
T ss_pred HHHHHHHHHHHhhhc-CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHH-----HHHHHHHHHHHhCCceEEEEcc
Confidence 344556666666431 23459999999999999999987 3 555655544 44444332 2245666666
Q ss_pred cccCCCCC-----CCeeEEEeccccccCC------cCC------------------HHHHHHHHHhcccCCeE-EEEEe
Q 006633 273 SIRLPYPS-----RAFDMAHCSRCLIPWG------QYA------------------DGLYLIEVDRVLRPGGY-WILSG 321 (637)
Q Consensus 273 ~~~Lpfpd-----~sFDlV~~s~~L~h~~------~~d------------------~~~~L~ei~RvLKPGG~-Lvls~ 321 (637)
... ++++ ++||+|+++..+++.. .+. ...+++++.++|||||+ +++..
T Consensus 88 ~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 88 GIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp HHH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred hHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 655 5555 8999999976553222 100 16788999999999999 55553
No 144
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.99 E-value=9.9e-10 Score=117.23 Aligned_cols=96 Identities=21% Similarity=0.152 Sum_probs=77.1
Q ss_pred CCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccCC
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWG 296 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~ 296 (637)
..+|||||||+|.++..++++ +..++.+ |+ +.+++.|++. ..+.+...|... |++.+ |+|++..++|+|.
T Consensus 202 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~-~~~~~~a~~~-~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~ 273 (364)
T 3p9c_A 202 LGTLVDVGGGVGATVAAIAAHYPTIKGVNF---DL-PHVISEAPQF-PGVTHVGGDMFK-EVPSG--DTILMKWILHDWS 273 (364)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEE---EC-HHHHTTCCCC-TTEEEEECCTTT-CCCCC--SEEEEESCGGGSC
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCCeEEEe---cC-HHHHHhhhhc-CCeEEEeCCcCC-CCCCC--CEEEehHHhccCC
Confidence 459999999999999999886 5555555 55 4555555433 468888888876 77754 9999999999998
Q ss_pred cCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 297 QYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 297 ~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+++...+|+++.++|||||+|++...
T Consensus 274 d~~~~~~L~~~~~~L~pgG~l~i~e~ 299 (364)
T 3p9c_A 274 DQHCATLLKNCYDALPAHGKVVLVQC 299 (364)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 64567899999999999999999864
No 145
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.99 E-value=2.3e-09 Score=114.96 Aligned_cols=115 Identities=16% Similarity=0.114 Sum_probs=81.2
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHcCCC--eEEEEeccccC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALERGVP--ALIGVMASIRL 276 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~erg~~--~~~~~~d~~~L 276 (637)
+.+.+.+.+.+.... +.+|||||||+|.++..+++++ ++++|++ .++..+ .+.+...+.. +.+..++...+
T Consensus 49 ~~~~~~i~~~~~~~~--~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a-~~~~~~~~~~~~v~~~~~d~~~~ 124 (376)
T 3r0q_C 49 DAYFNAVFQNKHHFE--GKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHA-RALVKANNLDHIVEVIEGSVEDI 124 (376)
T ss_dssp HHHHHHHHTTTTTTT--TCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHH-HHHHHHTTCTTTEEEEESCGGGC
T ss_pred HHHHHHHHhccccCC--CCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHH-HHHHHHcCCCCeEEEEECchhhc
Confidence 334444544433333 4599999999999999999884 5666665 344333 2333344543 78999999998
Q ss_pred CCCCCCeeEEEeccccccCCc-CCHHHHHHHHHhcccCCeEEEEEe
Q 006633 277 PYPSRAFDMAHCSRCLIPWGQ-YADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 277 pfpd~sFDlV~~s~~L~h~~~-~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+++ ++||+|++..+.+.... .+...++.++.++|||||.+++..
T Consensus 125 ~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 125 SLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp CCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred CcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 887 88999999765433321 168889999999999999998863
No 146
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.99 E-value=4.4e-10 Score=121.29 Aligned_cols=92 Identities=10% Similarity=0.071 Sum_probs=72.1
Q ss_pred CCEEEEECCC------CchHHHHHhhc-----CCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCC------CC
Q 006633 219 IRTAIDTGCG------VASWGAYLMSR-----NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYP------SR 281 (637)
Q Consensus 219 ~r~VLDIGCG------tG~~a~~La~~-----~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfp------d~ 281 (637)
..+||||||| +|..+..++++ .++++|+++.+. ....++.+.++|...+||. ++
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d~ 287 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRYG 287 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhcccC
Confidence 4599999999 66666666543 477788877541 2345789999999998887 78
Q ss_pred CeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 282 AFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 282 sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+||+|+|.. .+++. +...+|+++.|+|||||+|++.+.
T Consensus 288 sFDlVisdg-sH~~~--d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 288 PFDIVIDDG-SHINA--HVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp CEEEEEECS-CCCHH--HHHHHHHHHGGGEEEEEEEEEECG
T ss_pred CccEEEECC-cccch--hHHHHHHHHHHhcCCCeEEEEEec
Confidence 999999975 33443 788999999999999999999864
No 147
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.99 E-value=3.5e-09 Score=106.09 Aligned_cols=105 Identities=17% Similarity=0.268 Sum_probs=77.6
Q ss_pred HHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc---CCEEEEcCccccHHHHHHHHHHc----CC-C-eEEEEecccc
Q 006633 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV-P-ALIGVMASIR 275 (637)
Q Consensus 205 i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~---~v~~vdisp~Dls~a~i~~A~er----g~-~-~~~~~~d~~~ 275 (637)
...+...+...++. +|||+|||+|.++..+++. +..++.+ |+++.+++.|+++ +. + +.+...|...
T Consensus 82 ~~~i~~~~~~~~~~--~vldiG~G~G~~~~~l~~~~~~~~~v~~~---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 156 (255)
T 3mb5_A 82 AALIVAYAGISPGD--FIVEAGVGSGALTLFLANIVGPEGRVVSY---EIREDFAKLAWENIKWAGFDDRVTIKLKDIYE 156 (255)
T ss_dssp HHHHHHHTTCCTTC--EEEEECCTTSHHHHHHHHHHCTTSEEEEE---CSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG
T ss_pred HHHHHHhhCCCCCC--EEEEecCCchHHHHHHHHHhCCCeEEEEE---ecCHHHHHHHHHHHHHcCCCCceEEEECchhh
Confidence 34566666555544 9999999999999999887 4555555 4455555555443 43 3 7888888764
Q ss_pred CCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 276 LPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 276 Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++++++||+|++. .+ +...++.++.++|||||.+++..+
T Consensus 157 -~~~~~~~D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 157 -GIEEENVDHVILD-----LP--QPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp -CCCCCSEEEEEEC-----SS--CGGGGHHHHHHHEEEEEEEEEEES
T ss_pred -ccCCCCcCEEEEC-----CC--CHHHHHHHHHHHcCCCCEEEEEEC
Confidence 3778899999983 33 567799999999999999999875
No 148
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.99 E-value=1.7e-09 Score=110.43 Aligned_cols=103 Identities=12% Similarity=0.137 Sum_probs=74.1
Q ss_pred HHHHHhcccCCCCCEEEEECCCCchHHHHHhhc---CCEEEEcCccccHHHHHHHHHHc-----C-CCeEEEEeccccCC
Q 006633 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER-----G-VPALIGVMASIRLP 277 (637)
Q Consensus 207 ~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~---~v~~vdisp~Dls~a~i~~A~er-----g-~~~~~~~~d~~~Lp 277 (637)
.+.+.+...++ .+|||+|||+|.++..+++. +..++.+ |+++.+++.|+++ + .++.+...|... +
T Consensus 101 ~~~~~~~~~~~--~~VLD~G~G~G~~~~~la~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~ 174 (275)
T 1yb2_A 101 YIIMRCGLRPG--MDILEVGVGSGNMSSYILYALNGKGTLTVV---ERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-F 174 (275)
T ss_dssp -----CCCCTT--CEEEEECCTTSHHHHHHHHHHTTSSEEEEE---CSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-C
T ss_pred HHHHHcCCCCc--CEEEEecCCCCHHHHHHHHHcCCCCEEEEE---ECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-c
Confidence 34445544444 49999999999999999876 4455555 4555555555443 3 357888888766 6
Q ss_pred CCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 278 YPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 278 fpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+++++||+|++ +.+ +...+++++.++|||||.+++..+
T Consensus 175 ~~~~~fD~Vi~-----~~~--~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 175 ISDQMYDAVIA-----DIP--DPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp CCSCCEEEEEE-----CCS--CGGGSHHHHHHTEEEEEEEEEEES
T ss_pred CcCCCccEEEE-----cCc--CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 77789999998 344 677899999999999999999976
No 149
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.98 E-value=6.1e-10 Score=117.75 Aligned_cols=119 Identities=13% Similarity=0.128 Sum_probs=81.7
Q ss_pred ccHHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc----CCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccc
Q 006633 199 RGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFALERGVPALIGVMASI 274 (637)
Q Consensus 199 ~g~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~----~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~ 274 (637)
...+...+.+.+.+.... ..+|||+|||+|.++..++++ .++++|+++..+..+..+. ...+....+...|..
T Consensus 179 ~~~d~~~~~ll~~l~~~~--~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~-~~~~~~~~~~~~d~~ 255 (343)
T 2pjd_A 179 DGLDVGSQLLLSTLTPHT--KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATL-AANGVEGEVFASNVF 255 (343)
T ss_dssp SSCCHHHHHHHHHSCTTC--CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHH-HHTTCCCEEEECSTT
T ss_pred CCCcHHHHHHHHhcCcCC--CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HHhCCCCEEEEcccc
Confidence 333444555666664333 348999999999999999876 3667766554333333222 234556667666654
Q ss_pred cCCCCCCCeeEEEeccccccC---CcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 275 RLPYPSRAFDMAHCSRCLIPW---GQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 275 ~Lpfpd~sFDlV~~s~~L~h~---~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
. +.+++||+|+++..+++. ..++...++.++.|+|||||.+++..+
T Consensus 256 ~--~~~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 256 S--EVKGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp T--TCCSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred c--cccCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 4 347899999999988531 221567899999999999999999865
No 150
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.97 E-value=5e-09 Score=103.95 Aligned_cols=93 Identities=9% Similarity=0.051 Sum_probs=67.6
Q ss_pred CCEEEEECCCCchHHHHHhhc-C-CEEEEcCccccHHHHHHHHHHc---CCCeEEEEecccc----CCCCCCCeeEEEec
Q 006633 219 IRTAIDTGCGVASWGAYLMSR-N-ILAVSFAPRDTHEAQVQFALER---GVPALIGVMASIR----LPYPSRAFDMAHCS 289 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~-~-v~~vdisp~Dls~a~i~~A~er---g~~~~~~~~d~~~----Lpfpd~sFDlV~~s 289 (637)
+.+|||+|||+|.++..|++. + ..++++ |+++.+++.+.++ ..++.+...|... ++++ ++||+|++
T Consensus 75 ~~~VLDlGcG~G~~~~~la~~~~~~~v~gv---D~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~- 149 (230)
T 1fbn_A 75 DSKILYLGASAGTTPSHVADIADKGIVYAI---EYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIYE- 149 (230)
T ss_dssp TCEEEEESCCSSHHHHHHHHHTTTSEEEEE---ESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEEE-
T ss_pred CCEEEEEcccCCHHHHHHHHHcCCcEEEEE---ECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEEE-
Confidence 449999999999999999886 2 344444 4455555555433 2467888888777 7776 78999993
Q ss_pred cccccCCcC-CHHHHHHHHHhcccCCeEEEEE
Q 006633 290 RCLIPWGQY-ADGLYLIEVDRVLRPGGYWILS 320 (637)
Q Consensus 290 ~~L~h~~~~-d~~~~L~ei~RvLKPGG~Lvls 320 (637)
++... ....++.++.++|||||.+++.
T Consensus 150 ----~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 150 ----DVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ----CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----ecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 33310 2277899999999999999997
No 151
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.97 E-value=9.4e-10 Score=109.76 Aligned_cols=97 Identities=14% Similarity=0.087 Sum_probs=65.2
Q ss_pred CCEEEEECCCCchHHHHHhhc--C--CEEEEcCccccHHHHHHHH---H----HcCC-CeEEEEeccccCCCC-CCCeeE
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--N--ILAVSFAPRDTHEAQVQFA---L----ERGV-PALIGVMASIRLPYP-SRAFDM 285 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~--v~~vdisp~Dls~a~i~~A---~----erg~-~~~~~~~d~~~Lpfp-d~sFDl 285 (637)
+.+|||||||+|.++..|+++ + ++++|+++. .+++.| + +.+. ++.+..++...+|.. .+.+|.
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~----~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~ 100 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKE----NLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADS 100 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCG----GGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEE
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHH----HHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEE
Confidence 448999999999999999854 3 556666532 232222 2 2343 588888998888632 256676
Q ss_pred EEeccccc----cCCcCCHHHHHHHHHhcccCCeEEEEE
Q 006633 286 AHCSRCLI----PWGQYADGLYLIEVDRVLRPGGYWILS 320 (637)
Q Consensus 286 V~~s~~L~----h~~~~d~~~~L~ei~RvLKPGG~Lvls 320 (637)
|+++.... ++.. +...++.++.|+|||||.|++.
T Consensus 101 i~~~~~~~~~~~~~~~-~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 101 ISILFPWGTLLEYVIK-PNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp EEEESCCHHHHHHHHT-TCHHHHHHHHTTEEEEEEEEEE
T ss_pred EEEeCCCcHHhhhhhc-chHHHHHHHHHhcCCCcEEEEE
Confidence 66654221 1111 3456899999999999999994
No 152
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.97 E-value=4.1e-09 Score=110.86 Aligned_cols=114 Identities=14% Similarity=0.108 Sum_probs=80.4
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRL 276 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~L 276 (637)
..+.+.+.+.+...++. +|||||||+|.++..+++++ ++++|+++ .+.. ..+.+.+.+. .+.+...+...+
T Consensus 24 ~~y~~ai~~~~~~~~~~--~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~-~~~~-a~~~~~~~~~~~~i~~~~~d~~~~ 99 (328)
T 1g6q_1 24 LSYRNAIIQNKDLFKDK--IVLDVGCGTGILSMFAAKHGAKHVIGVDMSS-IIEM-AKELVELNGFSDKITLLRGKLEDV 99 (328)
T ss_dssp HHHHHHHHHHHHHHTTC--EEEEETCTTSHHHHHHHHTCCSEEEEEESST-HHHH-HHHHHHHTTCTTTEEEEESCTTTS
T ss_pred HHHHHHHHhhHhhcCCC--EEEEecCccHHHHHHHHHCCCCEEEEEChHH-HHHH-HHHHHHHcCCCCCEEEEECchhhc
Confidence 44555555555444444 99999999999999999874 56666652 3222 2223333443 478888899888
Q ss_pred CCCCCCeeEEEeccccccCC-cCCHHHHHHHHHhcccCCeEEEE
Q 006633 277 PYPSRAFDMAHCSRCLIPWG-QYADGLYLIEVDRVLRPGGYWIL 319 (637)
Q Consensus 277 pfpd~sFDlV~~s~~L~h~~-~~d~~~~L~ei~RvLKPGG~Lvl 319 (637)
++++++||+|++....+++. ......++.++.++|||||.++.
T Consensus 100 ~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 100 HLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred cCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 88888999999985443322 11678899999999999999984
No 153
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.97 E-value=1.9e-09 Score=113.86 Aligned_cols=112 Identities=18% Similarity=0.272 Sum_probs=77.8
Q ss_pred HHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--CCEEEEcC-ccccHHHHHHHHHHcCC--CeEEEEeccccCCCCCC
Q 006633 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFA-PRDTHEAQVQFALERGV--PALIGVMASIRLPYPSR 281 (637)
Q Consensus 207 ~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~v~~vdis-p~Dls~a~i~~A~erg~--~~~~~~~d~~~Lpfpd~ 281 (637)
.+.+.++... ..+|||||||+|.++..++++ ++.+++++ +..+..+..+. ...+. .+.+...|... +++.
T Consensus 174 ~l~~~~~~~~--~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~-~~~~- 248 (360)
T 1tw3_A 174 APAAAYDWTN--VRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYL-KDEGLSDRVDVVEGDFFE-PLPR- 248 (360)
T ss_dssp HHHHHSCCTT--CSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHH-HHTTCTTTEEEEECCTTS-CCSS-
T ss_pred HHHHhCCCcc--CcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHH-HhcCCCCceEEEeCCCCC-CCCC-
Confidence 3444444433 459999999999999999886 45555552 43333322222 22333 57888888654 4444
Q ss_pred CeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCC
Q 006633 282 AFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPP 323 (637)
Q Consensus 282 sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp 323 (637)
.||+|++..+++||.+++...+++++.++|||||++++..+.
T Consensus 249 ~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 249 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 499999999998888423358999999999999999998753
No 154
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.97 E-value=1.8e-09 Score=104.53 Aligned_cols=107 Identities=13% Similarity=0.003 Sum_probs=74.1
Q ss_pred HHHHHHHHhcccC-CCCCEEEEECCCCchHHHHHhhc--C--CEEEEcCccccHHHHHHHHHH----cCC-CeEEEEecc
Q 006633 204 YIDDIGKLINLKD-GSIRTAIDTGCGVASWGAYLMSR--N--ILAVSFAPRDTHEAQVQFALE----RGV-PALIGVMAS 273 (637)
Q Consensus 204 ~i~~L~~lL~~~~-g~~r~VLDIGCGtG~~a~~La~~--~--v~~vdisp~Dls~a~i~~A~e----rg~-~~~~~~~d~ 273 (637)
+.+.+.+.+.... ..+.+|||+|||+|.++..++.. + ++++|++ +.+++.+++ .+. ++.+...+.
T Consensus 50 ~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s-----~~~~~~a~~~~~~~~~~~v~~~~~d~ 124 (207)
T 1jsx_A 50 LVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSL-----GKRVRFLRQVQHELKLENIEPVQSRV 124 (207)
T ss_dssp HHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESC-----HHHHHHHHHHHHHTTCSSEEEEECCT
T ss_pred HHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCC-----HHHHHHHHHHHHHcCCCCeEEEecch
Confidence 3444444443221 12348999999999999999875 3 4555554 444444433 343 478888887
Q ss_pred ccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 274 IRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 274 ~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
..++ +.++||+|++... . +...++.++.++|+|||.+++...
T Consensus 125 ~~~~-~~~~~D~i~~~~~----~--~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 125 EEFP-SEPPFDGVISRAF----A--SLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp TTSC-CCSCEEEEECSCS----S--SHHHHHHHHTTSEEEEEEEEEEES
T ss_pred hhCC-ccCCcCEEEEecc----C--CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 7765 5678999998542 2 678899999999999999999843
No 155
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.94 E-value=4.2e-09 Score=104.76 Aligned_cols=109 Identities=15% Similarity=0.180 Sum_probs=74.9
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc---CCEEEEcCccccHHHHHHHHHHcC-CCeEEEEeccccCC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALERG-VPALIGVMASIRLP 277 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~---~v~~vdisp~Dls~a~i~~A~erg-~~~~~~~~d~~~Lp 277 (637)
......+.+.+...++. +|||||||+|.++..|++. .++++|+++..+..+..... ..+ .++.+...|. ..+
T Consensus 77 ~~~~~~~~~~l~~~~~~--~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~-~~~~~~v~~~~~d~-~~~ 152 (235)
T 1jg1_A 77 PHMVAIMLEIANLKPGM--NILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLE-RAGVKNVHVILGDG-SKG 152 (235)
T ss_dssp HHHHHHHHHHHTCCTTC--CEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHH-HTTCCSEEEEESCG-GGC
T ss_pred HHHHHHHHHhcCCCCCC--EEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHH-HcCCCCcEEEECCc-ccC
Confidence 33455666666555544 8999999999999999886 46666665433332222222 223 2577777776 455
Q ss_pred CCCC-CeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 278 YPSR-AFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 278 fpd~-sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++++ .||+|++..++.++. .++.++|||||.+++..+
T Consensus 153 ~~~~~~fD~Ii~~~~~~~~~--------~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 153 FPPKAPYDVIIVTAGAPKIP--------EPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp CGGGCCEEEEEECSBBSSCC--------HHHHHTEEEEEEEEEEEC
T ss_pred CCCCCCccEEEECCcHHHHH--------HHHHHhcCCCcEEEEEEe
Confidence 6554 499999998886555 478999999999999876
No 156
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.94 E-value=6.3e-09 Score=106.95 Aligned_cols=117 Identities=14% Similarity=0.063 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC---CEEEEc-CccccHHHHHHHH----HHcCC------Ce
Q 006633 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSF-APRDTHEAQVQFA----LERGV------PA 266 (637)
Q Consensus 201 ~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~---v~~vdi-sp~Dls~a~i~~A----~erg~------~~ 266 (637)
.....+.+.+...... +.+|||+|||+|.++..+++.+ ++++|+ ++..+..+..+.. ...+. .+
T Consensus 64 ~~~l~~~l~~~~~~~~--~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v 141 (281)
T 3bzb_A 64 ARALADTLCWQPELIA--GKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASP 141 (281)
T ss_dssp HHHHHHHHHHCGGGTT--TCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCC
T ss_pred HHHHHHHHHhcchhcC--CCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCe
Confidence 4445555555443333 3499999999999999998874 445555 3433332222210 11111 34
Q ss_pred EEEEeccccCC--C----CCCCeeEEEeccccccCCcCCHHHHHHHHHhccc---C--CeEEEEEe
Q 006633 267 LIGVMASIRLP--Y----PSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLR---P--GGYWILSG 321 (637)
Q Consensus 267 ~~~~~d~~~Lp--f----pd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLK---P--GG~Lvls~ 321 (637)
.+...+..... + ++++||+|+++.+++|.. +...++.++.++|+ | ||.+++..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~--~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 142 KVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQ--AHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp EEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGG--GHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred EEEEecCCCccHHHHhhccCCCCCEEEEeCcccChH--HHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 44433322210 1 357899999999986655 78999999999999 9 99887764
No 157
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.93 E-value=1.6e-08 Score=101.79 Aligned_cols=95 Identities=18% Similarity=0.180 Sum_probs=67.8
Q ss_pred CEEEEECCCCchHHHHHhhc---CCEEEEcCccccHHHHHHHHHHc----CC--CeEEEEecccc-CCCC--CCCeeEEE
Q 006633 220 RTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIR-LPYP--SRAFDMAH 287 (637)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~---~v~~vdisp~Dls~a~i~~A~er----g~--~~~~~~~d~~~-Lpfp--d~sFDlV~ 287 (637)
.+|||||||+|..+..|++. +..++.+ |+++.+++.|+++ +. .+.+..+|+.. ++.. .++||+|+
T Consensus 65 ~~VLdiG~G~G~~~~~la~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~ 141 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIWMARELPADGQLLTL---EADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIF 141 (248)
T ss_dssp SEEEEECCTTSHHHHHHHTTSCTTCEEEEE---ECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEE
T ss_pred CEEEEecCCchHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEE
Confidence 49999999999999999986 4344433 4444444444432 43 47888888755 3432 34899999
Q ss_pred eccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 288 CSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 288 ~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+... .. +...+++++.++|||||++++...
T Consensus 142 ~d~~----~~-~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 142 IDAD----KP-NNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp ECSC----GG-GHHHHHHHHHHTCCTTCEEEEECC
T ss_pred ECCc----hH-HHHHHHHHHHHhcCCCeEEEEeCC
Confidence 8542 22 667899999999999999999754
No 158
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.93 E-value=2.7e-09 Score=103.77 Aligned_cols=136 Identities=18% Similarity=0.204 Sum_probs=98.3
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcccchhhcccccc---CCCC-CccceeeeccccccC
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAM---STYP-RTYDLIHADSIFSLY 553 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~~wce~~---~~yp-~t~Dl~H~~~lfs~~ 553 (637)
..+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.+++.+.....-.+.+ ...+ .+||+|.+..++.
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-- 127 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADRGI---EAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-- 127 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC--
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC---EEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh--
Confidence 48999999999999999998865 6677788888999999996654443111222 2234 5699999987777
Q ss_pred CCCcCHHHHHHHHhhcccCCcEEEEEeCH--------------------------------HHHHHHHHHHhcCCceeEE
Q 006633 554 KDRCEMEDVLLEMDRILRPEGSVIIRDDV--------------------------------DILVKIKSITDGMEWEGRI 601 (637)
Q Consensus 554 ~~~c~~~~~l~e~dRiLrPgG~~i~~d~~--------------------------------~~~~~~~~~~~~~~W~~~~ 601 (637)
..+...+|-++-|+|||||++++.+.. -....+.++++.-.+++..
T Consensus 128 --~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~ 205 (227)
T 3e8s_A 128 --HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVS 205 (227)
T ss_dssp --SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEE
T ss_pred --hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEE
Confidence 346689999999999999999997531 0457788888888888875
Q ss_pred eccCCCCC---CcceEEEEEec
Q 006633 602 ADHENGPR---QREKILFANKK 620 (637)
Q Consensus 602 ~~~e~~~~---~~~~~l~~~K~ 620 (637)
+.....+. ...-+++++|+
T Consensus 206 ~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 206 LQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp EECCCCTTCSSCSCEEEEEEEC
T ss_pred EecCCCCCCCCceeEEEEeecC
Confidence 43221111 13567777774
No 159
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.93 E-value=5.1e-09 Score=102.94 Aligned_cols=108 Identities=15% Similarity=0.084 Sum_probs=72.7
Q ss_pred HHHHHhcccCCCCCEEEEECCCCchHHHHHhhc-----CCEEEEcCccccHHHHHHHHHHcC------CCeEEEEecccc
Q 006633 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-----NILAVSFAPRDTHEAQVQFALERG------VPALIGVMASIR 275 (637)
Q Consensus 207 ~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-----~v~~vdisp~Dls~a~i~~A~erg------~~~~~~~~d~~~ 275 (637)
.+.+.+......+.+|||+|||+|.++..|++. .++++|+++..+..+..... ..+ .++.+...|...
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~-~~~~~~~~~~~v~~~~~d~~~ 144 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVR-KDDPTLLSSGRVQLVVGDGRM 144 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHH-HHCTHHHHTSSEEEEESCGGG
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH-hhcccccCCCcEEEEECCccc
Confidence 444555412223459999999999999998875 35555554433332222211 212 257888888776
Q ss_pred CCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCC
Q 006633 276 LPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPP 323 (637)
Q Consensus 276 Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp 323 (637)
.+.++++||+|++...+.++. .++.++|||||.++++.++
T Consensus 145 ~~~~~~~fD~i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 145 GYAEEAPYDAIHVGAAAPVVP--------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CCGGGCCEEEEEECSBBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred CcccCCCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEec
Confidence 666678899999988775444 6889999999999998753
No 160
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.92 E-value=1e-10 Score=116.26 Aligned_cols=96 Identities=14% Similarity=0.137 Sum_probs=73.3
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHH----cCC--CeEEEEeccccCCCCCCCeeEEEecccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALE----RGV--PALIGVMASIRLPYPSRAFDMAHCSRCL 292 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~e----rg~--~~~~~~~d~~~Lpfpd~sFDlV~~s~~L 292 (637)
+.+|||+|||+|.++..|++.+..++.+ |+++.+++.|++ .++ ++.+..+|...++ ++++||+|+++..+
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~ 154 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALTGMRVIAI---DIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPW 154 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCC
T ss_pred CCEEEECccccCHHHHHHHHcCCEEEEE---ECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCc
Confidence 3499999999999999999986544444 445555554443 343 6888888887776 66899999999988
Q ss_pred ccCCcCCHHHHHHHHHhcccCCeEEEEE
Q 006633 293 IPWGQYADGLYLIEVDRVLRPGGYWILS 320 (637)
Q Consensus 293 ~h~~~~d~~~~L~ei~RvLKPGG~Lvls 320 (637)
++.. +....+.++.++|+|||.+++.
T Consensus 155 ~~~~--~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 155 GGPD--YATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp SSGG--GGGSSSBCTTTSCSSCHHHHHH
T ss_pred CCcc--hhhhHHHHHHhhcCCcceeHHH
Confidence 6655 4555788999999999997765
No 161
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.92 E-value=2.9e-09 Score=106.98 Aligned_cols=131 Identities=11% Similarity=0.129 Sum_probs=75.6
Q ss_pred CCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHcCCCeEEEE-eccccC---CCCCCCeeEEEeccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALERGVPALIGV-MASIRL---PYPSRAFDMAHCSRC 291 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~erg~~~~~~~-~d~~~L---pfpd~sFDlV~~s~~ 291 (637)
+.+|||||||+|.++..|++++ ++++|+++.++. .|+++........ .+...+ .++...||.+.+..+
T Consensus 38 g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~-----~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v 112 (232)
T 3opn_A 38 GKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLA-----WKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVS 112 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCC-----HHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCS
T ss_pred CCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHH-----HHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEE
Confidence 4599999999999999999885 455666555444 4544433322211 111111 112222455555444
Q ss_pred cccCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccc-----cCCCCchhhhHHhHhhHHHHHHHhceeeec
Q 006633 292 LIPWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHW-----KGWNRTTEDLKSEQNGIETIARSLCWKKLI 360 (637)
Q Consensus 292 L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~-----~~w~~t~e~l~~~~~~ie~la~~l~w~~v~ 360 (637)
+.++ ..++.++.|+|||||.|++...|. +...+ .+..+.........+++.++++..+|+...
T Consensus 113 ~~~l-----~~~l~~i~rvLkpgG~lv~~~~p~-~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~ 180 (232)
T 3opn_A 113 FISL-----DLILPPLYEILEKNGEVAALIKPQ-FEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKG 180 (232)
T ss_dssp SSCG-----GGTHHHHHHHSCTTCEEEEEECHH-HHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred hhhH-----HHHHHHHHHhccCCCEEEEEECcc-cccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEE
Confidence 4333 459999999999999999974211 11100 111112233334556788888888997543
No 162
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.91 E-value=3.9e-09 Score=107.27 Aligned_cols=110 Identities=12% Similarity=0.079 Sum_probs=76.7
Q ss_pred HHHHhcccCCCCCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHcC-------C--CeEEEEeccccC
Q 006633 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERG-------V--PALIGVMASIRL 276 (637)
Q Consensus 208 L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~erg-------~--~~~~~~~d~~~L 276 (637)
|..+++... +.+|||+|||+|.++..|+++ +..++.+ |+++.+++.|+++. . .+.+...|...+
T Consensus 28 L~~~~~~~~--~~~VLDlG~G~G~~~l~la~~~~~~~v~gv---Di~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~ 102 (260)
T 2ozv_A 28 LASLVADDR--ACRIADLGAGAGAAGMAVAARLEKAEVTLY---ERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLR 102 (260)
T ss_dssp HHHTCCCCS--CEEEEECCSSSSHHHHHHHHHCTTEEEEEE---ESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCC
T ss_pred HHHHhcccC--CCEEEEeCChHhHHHHHHHHhCCCCeEEEE---ECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHH
Confidence 444544433 348999999999999999887 2334444 55566666666542 2 277888887766
Q ss_pred -------CCCCCCeeEEEeccccccC----------------CcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 277 -------PYPSRAFDMAHCSRCLIPW----------------GQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 277 -------pfpd~sFDlV~~s~~L~h~----------------~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++++++||+|+++..+... .......+++++.++|||||.|++..+
T Consensus 103 ~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 103 AKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp HHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 3677899999998544221 111467899999999999999999865
No 163
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.91 E-value=6.8e-10 Score=111.95 Aligned_cols=101 Identities=15% Similarity=0.164 Sum_probs=70.7
Q ss_pred cccCCCCCEEEEECCCCchHHHHHhhc-----CCEEEEcCccccHHHHHHHHHHcCCCeEEEEecc---ccCCCCCCCee
Q 006633 213 NLKDGSIRTAIDTGCGVASWGAYLMSR-----NILAVSFAPRDTHEAQVQFALERGVPALIGVMAS---IRLPYPSRAFD 284 (637)
Q Consensus 213 ~~~~g~~r~VLDIGCGtG~~a~~La~~-----~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~---~~Lpfpd~sFD 284 (637)
.+++|+ +|||+|||+|.++..|++. .|.++|+++.++..+. +.+.+ ..++.....+. ...++..+++|
T Consensus 74 ~ikpG~--~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~-~~a~~-~~ni~~V~~d~~~p~~~~~~~~~vD 149 (233)
T 4df3_A 74 PVKEGD--RILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLL-TVVRD-RRNIFPILGDARFPEKYRHLVEGVD 149 (233)
T ss_dssp CCCTTC--EEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHH-HHSTT-CTTEEEEESCTTCGGGGTTTCCCEE
T ss_pred CCCCCC--EEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-HhhHh-hcCeeEEEEeccCccccccccceEE
Confidence 355555 9999999999999999986 2667777554433221 12212 23556655554 33467778999
Q ss_pred EEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 285 MAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 285 lV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+|++.. +.+. +...++.++.|+|||||.++++.
T Consensus 150 vVf~d~---~~~~-~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 150 GLYADV---AQPE-QAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEEECC---CCTT-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEec---cCCh-hHHHHHHHHHHhccCCCEEEEEE
Confidence 999753 3333 67889999999999999999974
No 164
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.91 E-value=9.4e-10 Score=107.59 Aligned_cols=110 Identities=12% Similarity=0.212 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHH----cCCCeEEEEeccc
Q 006633 201 ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALE----RGVPALIGVMASI 274 (637)
Q Consensus 201 ~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~e----rg~~~~~~~~d~~ 274 (637)
.+.+.+.+...++. ..+|||+|||+|.++..++.. ++.++.+ |+++.+++++++ .|+...+...+..
T Consensus 36 ld~fY~~~~~~l~~----~~~VLDlGCG~GplAl~l~~~~p~a~~~A~---Di~~~~leiar~~~~~~g~~~~v~~~d~~ 108 (200)
T 3fzg_A 36 LNDFYTYVFGNIKH----VSSILDFGCGFNPLALYQWNENEKIIYHAY---DIDRAEIAFLSSIIGKLKTTIKYRFLNKE 108 (200)
T ss_dssp HHHHHHHHHHHSCC----CSEEEEETCTTHHHHHHHHCSSCCCEEEEE---CSCHHHHHHHHHHHHHSCCSSEEEEECCH
T ss_pred HHHHHHHHHhhcCC----CCeEEEecCCCCHHHHHHHhcCCCCEEEEE---eCCHHHHHHHHHHHHhcCCCccEEEeccc
Confidence 45555666666532 348999999999999999766 4444444 556666666553 3555344445554
Q ss_pred cCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEE
Q 006633 275 RLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILS 320 (637)
Q Consensus 275 ~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls 320 (637)
.. .+.++||+|+...++|++ + +.+..+.++.+.|||||.|+-.
T Consensus 109 ~~-~~~~~~DvVLa~k~LHlL-~-~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 109 SD-VYKGTYDVVFLLKMLPVL-K-QQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp HH-HTTSEEEEEEEETCHHHH-H-HTTCCHHHHHHTCEEEEEEEEE
T ss_pred cc-CCCCCcChhhHhhHHHhh-h-hhHHHHHHHHHHhCCCCEEEEe
Confidence 43 466889999999999777 5 7777778999999999988765
No 165
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.91 E-value=8.4e-09 Score=102.67 Aligned_cols=104 Identities=13% Similarity=0.186 Sum_probs=73.1
Q ss_pred HHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--C--CEEEEcCccccHHHHHHHHHH----cCC--CeEEEEecccc
Q 006633 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--N--ILAVSFAPRDTHEAQVQFALE----RGV--PALIGVMASIR 275 (637)
Q Consensus 206 ~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~--v~~vdisp~Dls~a~i~~A~e----rg~--~~~~~~~d~~~ 275 (637)
..+..++...++ .+|||||||+|.++..|++. + ++++|+++ .+++.|++ .+. .+.+...|...
T Consensus 61 ~~l~~~~~~~~~--~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~-----~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (232)
T 3ntv_A 61 DLIKQLIRMNNV--KNILEIGTAIGYSSMQFASISDDIHVTTIERNE-----TMIQYAKQNLATYHFENQVRIIEGNALE 133 (232)
T ss_dssp HHHHHHHHHHTC--CEEEEECCSSSHHHHHHHTTCTTCEEEEEECCH-----HHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred HHHHHHHhhcCC--CEEEEEeCchhHHHHHHHHhCCCCEEEEEECCH-----HHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 344444444443 49999999999999999983 3 45555544 44444433 343 58888888755
Q ss_pred C-C-CCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 276 L-P-YPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 276 L-p-fpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
. + ..+++||+|++... .. +...+++++.++|||||.|++..
T Consensus 134 ~~~~~~~~~fD~V~~~~~----~~-~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 134 QFENVNDKVYDMIFIDAA----KA-QSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp CHHHHTTSCEEEEEEETT----SS-SHHHHHHHHGGGEEEEEEEEEEC
T ss_pred HHHhhccCCccEEEEcCc----HH-HHHHHHHHHHHhcCCCeEEEEee
Confidence 3 3 34689999997642 22 67789999999999999999864
No 166
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.89 E-value=4.9e-09 Score=103.16 Aligned_cols=91 Identities=18% Similarity=0.121 Sum_probs=67.8
Q ss_pred CCEEEEECCCCchHHHHHhhcC---------CEEEEcCccccHHHHHHHHHHc----C------CCeEEEEeccccCC--
Q 006633 219 IRTAIDTGCGVASWGAYLMSRN---------ILAVSFAPRDTHEAQVQFALER----G------VPALIGVMASIRLP-- 277 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~---------v~~vdisp~Dls~a~i~~A~er----g------~~~~~~~~d~~~Lp-- 277 (637)
+.+|||||||+|.++..|++.. ++++|+ ++.+++.|+++ + .++.+...|.....
T Consensus 81 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~-----~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 155 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLER-----VKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE 155 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEES-----CHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH
T ss_pred CCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeC-----CHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc
Confidence 3499999999999999998752 445555 44444444432 2 36788888877765
Q ss_pred --CCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 278 --YPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 278 --fpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
...++||+|++...++++. .++.++|||||.+++..+
T Consensus 156 ~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 156 EKKELGLFDAIHVGASASELP--------EILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHHCCEEEEEECSBBSSCC--------HHHHHHEEEEEEEEEEEE
T ss_pred cCccCCCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEc
Confidence 5567899999998775443 788999999999999865
No 167
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.89 E-value=2.9e-09 Score=106.89 Aligned_cols=99 Identities=15% Similarity=0.066 Sum_probs=67.4
Q ss_pred CCEEEEECCCCchHHHHHhhc------CCEEEEcCccccHHHHHHHHHHc-------CC--C------------------
Q 006633 219 IRTAIDTGCGVASWGAYLMSR------NILAVSFAPRDTHEAQVQFALER-------GV--P------------------ 265 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~------~v~~vdisp~Dls~a~i~~A~er-------g~--~------------------ 265 (637)
..+|||+|||+|.++..++++ .++++|+++ .+++.|+++ +. .
T Consensus 52 ~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~-----~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (250)
T 1o9g_A 52 PVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDP-----APLELAAKNLALLSPAGLTARELERREQSERFGKPSYLE 126 (250)
T ss_dssp CEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCH-----HHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred CCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCH-----HHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchh
Confidence 458999999999999998875 355665554 444444321 11 0
Q ss_pred -------eE-------------EEEeccccCCC-----CCCCeeEEEeccccccCCc-------CCHHHHHHHHHhcccC
Q 006633 266 -------AL-------------IGVMASIRLPY-----PSRAFDMAHCSRCLIPWGQ-------YADGLYLIEVDRVLRP 313 (637)
Q Consensus 266 -------~~-------------~~~~d~~~Lpf-----pd~sFDlV~~s~~L~h~~~-------~d~~~~L~ei~RvLKP 313 (637)
+. +...|...... ..++||+|+|+..+++... +....++.++.++|||
T Consensus 127 ~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp 206 (250)
T 1o9g_A 127 AAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPA 206 (250)
T ss_dssp HHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCT
T ss_pred hhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCC
Confidence 23 77777655321 3458999999876654432 1345899999999999
Q ss_pred CeEEEEEeC
Q 006633 314 GGYWILSGP 322 (637)
Q Consensus 314 GG~Lvls~p 322 (637)
||+++++..
T Consensus 207 gG~l~~~~~ 215 (250)
T 1o9g_A 207 HAVIAVTDR 215 (250)
T ss_dssp TCEEEEEES
T ss_pred CcEEEEeCc
Confidence 999999654
No 168
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.88 E-value=8.1e-09 Score=101.97 Aligned_cols=109 Identities=14% Similarity=0.116 Sum_probs=72.7
Q ss_pred HHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc----------CCEEEEcCccccHHHHHHHHHHc-----CCCeEEE
Q 006633 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR----------NILAVSFAPRDTHEAQVQFALER-----GVPALIG 269 (637)
Q Consensus 205 i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~----------~v~~vdisp~Dls~a~i~~A~er-----g~~~~~~ 269 (637)
...+.+.+......+.+|||||||+|.++..|++. .++++|+++..+..+........ ..++.+.
T Consensus 71 ~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 150 (227)
T 1r18_A 71 HAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIV 150 (227)
T ss_dssp HHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEE
Confidence 34455555311222449999999999999988874 35566665433333322222111 2357788
Q ss_pred EeccccCCCCC-CCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 270 VMASIRLPYPS-RAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 270 ~~d~~~Lpfpd-~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
..|... ++++ ++||+|++...++++. .++.++|||||.+++...
T Consensus 151 ~~d~~~-~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 151 EGDGRK-GYPPNAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVG 195 (227)
T ss_dssp ESCGGG-CCGGGCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEES
T ss_pred ECCccc-CCCcCCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEe
Confidence 777765 5554 7899999998885544 689999999999999865
No 169
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.87 E-value=5.5e-09 Score=114.28 Aligned_cols=116 Identities=14% Similarity=0.050 Sum_probs=78.3
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc----CCEEEEcCccccHHH--HHHHHHH----cC---CCeEE
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEA--QVQFALE----RG---VPALI 268 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~----~v~~vdisp~Dls~a--~i~~A~e----rg---~~~~~ 268 (637)
...+..+.+.+...++. +|||||||+|.++..|++. .++++|+++..+..+ |++.+++ .+ .++.+
T Consensus 228 p~~v~~ml~~l~l~~g~--~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~ 305 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGD--TFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEF 305 (433)
T ss_dssp HHHHHHHHHHTTCCTTC--EEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEE
T ss_pred HHHHHHHHHhcCCCCCC--EEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEE
Confidence 34455566666555544 9999999999999999885 266677665443333 3222232 34 35677
Q ss_pred EEeccccC--CC--CCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 269 GVMASIRL--PY--PSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 269 ~~~d~~~L--pf--pd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
..++.... ++ ..++||+|+++..+ +. + +...+|.++.++|||||.+++..+
T Consensus 306 i~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~-~-d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 306 SLKKSFVDNNRVAELIPQCDVILVNNFL-FD-E-DLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp EESSCSTTCHHHHHHGGGCSEEEECCTT-CC-H-HHHHHHHHHHTTCCTTCEEEESSC
T ss_pred EEcCccccccccccccCCCCEEEEeCcc-cc-c-cHHHHHHHHHHhCCCCeEEEEeec
Confidence 66554322 12 24789999997666 33 3 788899999999999999999753
No 170
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.87 E-value=1.4e-08 Score=103.51 Aligned_cols=104 Identities=20% Similarity=0.261 Sum_probs=75.9
Q ss_pred HHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc---CCEEEEcCccccHHHHHHHHHHc----CC--CeEEEEeccccC
Q 006633 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRL 276 (637)
Q Consensus 206 ~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~---~v~~vdisp~Dls~a~i~~A~er----g~--~~~~~~~d~~~L 276 (637)
..+...+...++. +|||+|||+|.++..++++ +..++.+ |+++.+++.|+++ +. .+.+...|....
T Consensus 102 ~~i~~~~~~~~~~--~VLDiG~G~G~~~~~la~~~~~~~~v~~v---D~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 176 (277)
T 1o54_A 102 SFIAMMLDVKEGD--RIIDTGVGSGAMCAVLARAVGSSGKVFAY---EKREEFAKLAESNLTKWGLIERVTIKVRDISEG 176 (277)
T ss_dssp HHHHHHTTCCTTC--EEEEECCTTSHHHHHHHHHTTTTCEEEEE---CCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC
T ss_pred HHHHHHhCCCCCC--EEEEECCcCCHHHHHHHHHhCCCcEEEEE---ECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc
Confidence 4555566555544 9999999999999999876 3444444 4455555555433 43 577777777665
Q ss_pred CCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 277 PYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 277 pfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+++++||+|++. .+ ++..++.++.++|||||.+++..+
T Consensus 177 -~~~~~~D~V~~~-----~~--~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 177 -FDEKDVDALFLD-----VP--DPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp -CSCCSEEEEEEC-----CS--CGGGTHHHHHHHEEEEEEEEEEES
T ss_pred -ccCCccCEEEEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 677889999984 23 566799999999999999999875
No 171
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.87 E-value=5.5e-09 Score=103.59 Aligned_cols=98 Identities=13% Similarity=0.138 Sum_probs=70.1
Q ss_pred CCEEEEECCCCchHHHHHhhc-----CCEEEEcCccccHHHHHHHHHHcCCCeEEEEecccc---CCCCCCCeeEEEecc
Q 006633 219 IRTAIDTGCGVASWGAYLMSR-----NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIR---LPYPSRAFDMAHCSR 290 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~-----~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~---Lpfpd~sFDlV~~s~ 290 (637)
+.+|||+|||+|.++..|+++ .++++|+++..+ +.+++.|..+ .++.+..+|... +++.+++||+|++..
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i-~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSG-RDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIFADV 155 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHH-HHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEEECC
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHH-HHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEEEcC
Confidence 449999999999999999876 245555544222 2344555554 568888888766 455678999999965
Q ss_pred ccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 291 CLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 291 ~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
. ... ....++.++.++|||||.++++.+
T Consensus 156 ~---~~~-~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 156 A---QPD-QTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp C---CTT-HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C---Ccc-HHHHHHHHHHHHcCCCeEEEEEEc
Confidence 3 221 345568899999999999999754
No 172
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.87 E-value=2.1e-09 Score=107.90 Aligned_cols=92 Identities=11% Similarity=0.062 Sum_probs=68.8
Q ss_pred CEEEEECCCCchHHHHHhhc------C--CEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccC---CCCC-CCeeEEE
Q 006633 220 RTAIDTGCGVASWGAYLMSR------N--ILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRL---PYPS-RAFDMAH 287 (637)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~------~--v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~L---pfpd-~sFDlV~ 287 (637)
.+|||||||+|..+..|++. + |+++|+++..+. .|+....++.+..+|.... ++.+ .+||+|+
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~-----~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~ 157 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQ-----IPASDMENITLHQGDCSDLTTFEHLREMAHPLIF 157 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCC-----CCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHH-----HHhccCCceEEEECcchhHHHHHhhccCCCCEEE
Confidence 48999999999999998874 3 566777665443 3323335688888888764 5433 4799999
Q ss_pred eccccccCCcCCHHHHHHHHHh-cccCCeEEEEEe
Q 006633 288 CSRCLIPWGQYADGLYLIEVDR-VLRPGGYWILSG 321 (637)
Q Consensus 288 ~s~~L~h~~~~d~~~~L~ei~R-vLKPGG~Lvls~ 321 (637)
+... | . +...++.++.| +|||||+|++..
T Consensus 158 ~d~~--~--~-~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 158 IDNA--H--A-NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp EESS--C--S-SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred ECCc--h--H-hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 8654 3 2 67889999998 999999999974
No 173
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.86 E-value=4e-09 Score=103.88 Aligned_cols=106 Identities=16% Similarity=0.157 Sum_probs=71.2
Q ss_pred HHHHHhcccCCCCCEEEEECCCCchHHHHHhhc---C--CEEEEcCccccHHHHHHHHHH----cCC--CeEEEEecccc
Q 006633 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---N--ILAVSFAPRDTHEAQVQFALE----RGV--PALIGVMASIR 275 (637)
Q Consensus 207 ~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~---~--v~~vdisp~Dls~a~i~~A~e----rg~--~~~~~~~d~~~ 275 (637)
.+..++....+ .+|||||||+|..+..|++. + ++++|+++ .+++.|++ .+. .+.+..+|...
T Consensus 49 ~l~~l~~~~~~--~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~-----~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 121 (221)
T 3u81_A 49 IMDAVIREYSP--SLVLELGAYCGYSAVRMARLLQPGARLLTMEINP-----DCAAITQQMLNFAGLQDKVTILNGASQD 121 (221)
T ss_dssp HHHHHHHHHCC--SEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCH-----HHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred HHHHHHHhcCC--CEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCh-----HHHHHHHHHHHHcCCCCceEEEECCHHH
Confidence 34444443343 48999999999999999984 3 45555544 44444443 233 37888887643
Q ss_pred -CCCC-----CCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 276 -LPYP-----SRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 276 -Lpfp-----d~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++.. .++||+|++....+++. +...++.++ ++|||||.+++...
T Consensus 122 ~l~~~~~~~~~~~fD~V~~d~~~~~~~--~~~~~~~~~-~~LkpgG~lv~~~~ 171 (221)
T 3u81_A 122 LIPQLKKKYDVDTLDMVFLDHWKDRYL--PDTLLLEKC-GLLRKGTVLLADNV 171 (221)
T ss_dssp HGGGTTTTSCCCCCSEEEECSCGGGHH--HHHHHHHHT-TCCCTTCEEEESCC
T ss_pred HHHHHHHhcCCCceEEEEEcCCcccch--HHHHHHHhc-cccCCCeEEEEeCC
Confidence 3322 27899999987665554 455677777 99999999998743
No 174
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.86 E-value=2.4e-08 Score=99.19 Aligned_cols=94 Identities=14% Similarity=0.153 Sum_probs=66.4
Q ss_pred CEEEEECCCCchHHHHHhhc---CCEEEEcCccccHHHHHHHHHH----cCC---CeEEEEeccccC-C-CCCCCeeEEE
Q 006633 220 RTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALE----RGV---PALIGVMASIRL-P-YPSRAFDMAH 287 (637)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~---~v~~vdisp~Dls~a~i~~A~e----rg~---~~~~~~~d~~~L-p-fpd~sFDlV~ 287 (637)
.+|||||||+|..+..|++. +..++.+ |+++.+++.|++ .+. .+.+..+++... + +++++||+|+
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~ 134 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCI---DPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVF 134 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEE---CSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEE
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEE
Confidence 38999999999999999874 3333344 334444444432 343 377887776543 2 4468999999
Q ss_pred eccccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 288 CSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 288 ~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+... .. +...+++++.++|||||.+++..
T Consensus 135 ~d~~----~~-~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 135 GQVS----PM-DLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp ECCC----TT-THHHHHHHHHHHEEEEEEEEETT
T ss_pred EcCc----HH-HHHHHHHHHHHHcCCCcEEEEeC
Confidence 8642 22 56779999999999999999964
No 175
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.86 E-value=9.5e-09 Score=102.03 Aligned_cols=105 Identities=18% Similarity=0.080 Sum_probs=75.9
Q ss_pred HHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc----C--CCeEEEEeccccCCCC
Q 006633 206 DDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----G--VPALIGVMASIRLPYP 279 (637)
Q Consensus 206 ~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er----g--~~~~~~~~d~~~Lpfp 279 (637)
..+.+.+...++. +|||+|||+|.++..+++.+..++.+ |+++.+++.|+++ + ..+.+...|.....++
T Consensus 81 ~~~~~~~~~~~~~--~vldiG~G~G~~~~~l~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 155 (248)
T 2yvl_A 81 FYIALKLNLNKEK--RVLEFGTGSGALLAVLSEVAGEVWTF---EAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVP 155 (248)
T ss_dssp HHHHHHTTCCTTC--EEEEECCTTSHHHHHHHHHSSEEEEE---CSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCC
T ss_pred HHHHHhcCCCCCC--EEEEeCCCccHHHHHHHHhCCEEEEE---ecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccC
Confidence 3555565555544 99999999999999998875444444 4455555555443 3 3577777777665436
Q ss_pred CCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 280 SRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 280 d~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++.||+|++. .. ++..++.++.++|||||.+++..+
T Consensus 156 ~~~~D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 156 EGIFHAAFVD-----VR--EPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp TTCBSEEEEC-----SS--CGGGGHHHHHHHBCTTCEEEEEES
T ss_pred CCcccEEEEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 7789999983 22 566789999999999999999976
No 176
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.86 E-value=4.4e-09 Score=101.22 Aligned_cols=92 Identities=14% Similarity=0.149 Sum_probs=67.5
Q ss_pred CCEEEEECCCCchHHHHHhhc------CCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCC---------------
Q 006633 219 IRTAIDTGCGVASWGAYLMSR------NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLP--------------- 277 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~------~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lp--------------- 277 (637)
+.+|||+|||+|.++..++++ .++++|+++.. ....+.+...|...++
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~ 91 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNN 91 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC-----------
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhccccccccccc
Confidence 348999999999999999875 25667776521 1234677788877766
Q ss_pred ----------CCCCCeeEEEeccccccCCcC---CH-------HHHHHHHHhcccCCeEEEEEeC
Q 006633 278 ----------YPSRAFDMAHCSRCLIPWGQY---AD-------GLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 278 ----------fpd~sFDlV~~s~~L~h~~~~---d~-------~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+++++||+|++..++ |+... +. ..++.++.++|||||.|++...
T Consensus 92 ~~~~~~~~~~~~~~~fD~v~~~~~~-~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (201)
T 2plw_A 92 NSVDYKLKEILQDKKIDIILSDAAV-PCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMY 155 (201)
T ss_dssp CHHHHHHHHHHTTCCEEEEEECCCC-CCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhhHHHHHhhcCCCcccEEEeCCCc-CCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEe
Confidence 567899999998776 44210 22 2378999999999999999753
No 177
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.85 E-value=3.7e-09 Score=111.76 Aligned_cols=96 Identities=13% Similarity=0.093 Sum_probs=74.9
Q ss_pred CCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccCC
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWG 296 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~ 296 (637)
..+|||||||+|.++..++++ +..++.+ |+ +.+++.|++. ..+.+...|... ++++ ||+|++..+++||.
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~-~~~~~~a~~~-~~v~~~~~d~~~-~~p~--~D~v~~~~~lh~~~ 260 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKLKCIVF---DR-PQVVENLSGS-NNLTYVGGDMFT-SIPN--ADAVLLKYILHNWT 260 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEE---EC-HHHHTTCCCB-TTEEEEECCTTT-CCCC--CSEEEEESCGGGSC
T ss_pred CceEEEeCCCccHHHHHHHHHCCCCeEEEe---eC-HHHHhhcccC-CCcEEEeccccC-CCCC--ccEEEeehhhccCC
Confidence 359999999999999999976 4555555 66 5666666443 347888888755 6663 99999999999998
Q ss_pred cCCHHHHHHHHHhcccC---CeEEEEEeC
Q 006633 297 QYADGLYLIEVDRVLRP---GGYWILSGP 322 (637)
Q Consensus 297 ~~d~~~~L~ei~RvLKP---GG~Lvls~p 322 (637)
+++...+|+++.++||| ||++++..+
T Consensus 261 d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 261 DKDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp HHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 42223999999999999 999999864
No 178
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.85 E-value=1.1e-08 Score=106.56 Aligned_cols=99 Identities=13% Similarity=0.106 Sum_probs=69.5
Q ss_pred CCEEEEECCCCchHHHHHhhc----CCEEEEcCccccHHHHHHHHHHcC---------CCeEEEEeccccCCC--CCCCe
Q 006633 219 IRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFALERG---------VPALIGVMASIRLPY--PSRAF 283 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~----~v~~vdisp~Dls~a~i~~A~erg---------~~~~~~~~d~~~Lpf--pd~sF 283 (637)
..+|||||||+|.++..+++. .++++|+ ++.+++.|+++. ..+.+...|...++. ++++|
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDi-----d~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~f 170 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLVDI-----DGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTY 170 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEEES-----CHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEEEC-----CHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCce
Confidence 459999999999999999976 2455555 445555554432 457888888766553 47899
Q ss_pred eEEEeccccccCCcCC--HHHHHHHHHhcccCCeEEEEEeC
Q 006633 284 DMAHCSRCLIPWGQYA--DGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 284 DlV~~s~~L~h~~~~d--~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
|+|++.......+... ...+++++.|+|||||.|++...
T Consensus 171 DvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 171 DVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp EEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred eEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 9999976552222111 16899999999999999999854
No 179
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.84 E-value=5.1e-08 Score=103.56 Aligned_cols=108 Identities=19% Similarity=0.167 Sum_probs=80.1
Q ss_pred HHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHc-----CCCeEEEEeccccCCCC
Q 006633 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER-----GVPALIGVMASIRLPYP 279 (637)
Q Consensus 207 ~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~er-----g~~~~~~~~d~~~Lpfp 279 (637)
.+.+.++... .++|||||||+|.++..++++ ++.++.+ |+ +..++.|+++ ...+.+..+|....|++
T Consensus 170 ~~~~~~~~~~--~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~---dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~ 243 (353)
T 4a6d_A 170 SVLTAFDLSV--FPLMCDLGGGAGALAKECMSLYPGCKITVF---DI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP 243 (353)
T ss_dssp HHHHSSCGGG--CSEEEEETCTTSHHHHHHHHHCSSCEEEEE---EC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC
T ss_pred HHHHhcCccc--CCeEEeeCCCCCHHHHHHHHhCCCceeEec---cC-HHHHHHHHHhhhhcccCceeeecCccccCCCC
Confidence 3444444333 349999999999999999987 5555544 43 3455555543 13478888887666655
Q ss_pred CCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 280 SRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 280 d~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.+|+|++..+||+|.+++...+|+++.+.|+|||.+++...
T Consensus 244 --~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~ 284 (353)
T 4a6d_A 244 --EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIES 284 (353)
T ss_dssp --CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred --CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEe
Confidence 47999999999999964556889999999999999999864
No 180
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.84 E-value=1.8e-08 Score=98.76 Aligned_cols=95 Identities=17% Similarity=0.167 Sum_probs=66.4
Q ss_pred CEEEEECCCCchHHHHHhhc---CCEEEEcCccccHHHHHHHHHH----cCC--CeEEEEeccccC-C-CC----CCCee
Q 006633 220 RTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALE----RGV--PALIGVMASIRL-P-YP----SRAFD 284 (637)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~---~v~~vdisp~Dls~a~i~~A~e----rg~--~~~~~~~d~~~L-p-fp----d~sFD 284 (637)
.+|||||||+|.++..|++. +..++.+ |+++.+++.|++ .+. .+.+..++.... + +. .++||
T Consensus 66 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 66 KKVIDIGTFTGYSAIAMGLALPKDGTLITC---DVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCTTCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred CEEEEeCCcchHHHHHHHHhCCCCCEEEEE---eCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 38999999999999999986 4333333 334444444433 233 378888776432 2 11 17899
Q ss_pred EEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 285 MAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 285 lV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+|++.. ... +...+++++.++|||||++++...
T Consensus 143 ~v~~~~----~~~-~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 143 LIYIDA----DKA-NTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp EEEECS----CGG-GHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEEECC----CHH-HHHHHHHHHHHhcCCCcEEEEeCC
Confidence 999654 233 678899999999999999999754
No 181
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.83 E-value=3.7e-08 Score=106.09 Aligned_cols=112 Identities=16% Similarity=0.182 Sum_probs=76.8
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc-cchhhccccccCC-CC-Cccceeeeccc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQNWCEAMST-YP-RTYDLIHADSI 549 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-~~~~~~wce~~~~-yp-~t~Dl~H~~~l 549 (637)
...+|||+|||+|.++.+|++.+. .|+.+|.++.++..+.++ |+ +-+++ +..+.. .+ .+||+|-++..
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~---~V~gvDis~~al~~A~~n~~~~~~~v~~~~--~D~~~~~~~~~~fD~Ii~npp 307 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGA---EVVGVEDDLASVLSLQKGLEANALKAQALH--SDVDEALTEEARFDIIVTNPP 307 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTC---EEEEEESBHHHHHHHHHHHHHTTCCCEEEE--CSTTTTSCTTCCEEEEEECCC
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCeEEEE--cchhhccccCCCeEEEEECCc
Confidence 356899999999999999998864 667777777777776654 22 22222 111221 23 79999999888
Q ss_pred cccCCC--CcCHHHHHHHHhhcccCCcEEEEEeCH--HHHHHHHHHHh
Q 006633 550 FSLYKD--RCEMEDVLLEMDRILRPEGSVIIRDDV--DILVKIKSITD 593 (637)
Q Consensus 550 fs~~~~--~c~~~~~l~e~dRiLrPgG~~i~~d~~--~~~~~~~~~~~ 593 (637)
|..... .-....++-++-|+|||||.++|..+. .....+++...
T Consensus 308 ~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~~~~l~~~f~ 355 (381)
T 3dmg_A 308 FHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPFLKYEPLLEEKFG 355 (381)
T ss_dssp CCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTTSCHHHHHHHHHS
T ss_pred hhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCCCChHHHHHHhhc
Confidence 764322 234568999999999999999997543 23444555444
No 182
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.83 E-value=8.1e-09 Score=114.49 Aligned_cols=111 Identities=12% Similarity=0.078 Sum_probs=78.5
Q ss_pred HHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC-CEEEEcCccccHHHHHHHHH----HcCC--CeEEEEecccc
Q 006633 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN-ILAVSFAPRDTHEAQVQFAL----ERGV--PALIGVMASIR 275 (637)
Q Consensus 203 ~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~-v~~vdisp~Dls~a~i~~A~----erg~--~~~~~~~d~~~ 275 (637)
.+.+.+.+.+.... +.+|||||||+|.++..+++.+ ..++.+ |+++ +++.|+ +.+. .+.+..++...
T Consensus 145 ~~~~~il~~l~~~~--~~~VLDiGcGtG~la~~la~~~~~~V~gv---D~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~ 218 (480)
T 3b3j_A 145 TYQRAILQNHTDFK--DKIVLDVGCGSGILSFFAAQAGARKIYAV---EAST-MAQHAEVLVKSNNLTDRIVVIPGKVEE 218 (480)
T ss_dssp HHHHHHHHTGGGTT--TCEEEEESCSTTHHHHHHHHTTCSEEEEE---ECHH-HHHHHHHHHHHTTCTTTEEEEESCTTT
T ss_pred HHHHHHHHhhhhcC--CCEEEEecCcccHHHHHHHHcCCCEEEEE---EcHH-HHHHHHHHHHHcCCCCcEEEEECchhh
Confidence 34444555544333 3499999999999999998874 244444 4444 444443 3343 48888888888
Q ss_pred CCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEE
Q 006633 276 LPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILS 320 (637)
Q Consensus 276 Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls 320 (637)
++++ ++||+|+++..++|+..++....+.++.++|||||.+++.
T Consensus 219 ~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 219 VSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp CCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred CccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 7765 5899999988877776435567788999999999999864
No 183
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.83 E-value=2.6e-08 Score=96.16 Aligned_cols=93 Identities=12% Similarity=-0.026 Sum_probs=66.7
Q ss_pred CCEEEEECCCCchHHHHHhhcCC-EEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccCCc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQ 297 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v-~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~ 297 (637)
+.+|||+|||+|.++..+++.+. .++.+ |+++.+++.|+++..++.+...|...++ ++||+|+++..++++..
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLLGAESVTAF---DIDPDAIETAKRNCGGVNFMVADVSEIS---GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHTTBSEEEEE---ESCHHHHHHHHHHCTTSEEEECCGGGCC---CCEEEEEECCCC-----
T ss_pred CCEEEEEeCCccHHHHHHHHcCCCEEEEE---ECCHHHHHHHHHhcCCCEEEECcHHHCC---CCeeEEEECCCchhccC
Confidence 45999999999999999998743 34444 5566777777766546788888888765 68999999999877764
Q ss_pred CCHHHHHHHHHhcccCCeEEEEE
Q 006633 298 YADGLYLIEVDRVLRPGGYWILS 320 (637)
Q Consensus 298 ~d~~~~L~ei~RvLKPGG~Lvls 320 (637)
.....++.++.++| |+ +++.
T Consensus 126 ~~~~~~l~~~~~~~--g~-~~~~ 145 (200)
T 1ne2_A 126 HSDRAFIDKAFETS--MW-IYSI 145 (200)
T ss_dssp --CHHHHHHHHHHE--EE-EEEE
T ss_pred chhHHHHHHHHHhc--Cc-EEEE
Confidence 23457899999998 55 4444
No 184
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.83 E-value=1.4e-08 Score=102.30 Aligned_cols=108 Identities=12% Similarity=0.029 Sum_probs=73.1
Q ss_pred HHHHHHhc---ccCCCCCEEEEECCCCchHHHHHhhc-----CCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCC
Q 006633 206 DDIGKLIN---LKDGSIRTAIDTGCGVASWGAYLMSR-----NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLP 277 (637)
Q Consensus 206 ~~L~~lL~---~~~g~~r~VLDIGCGtG~~a~~La~~-----~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lp 277 (637)
..+.+.+. +.+ +.+|||+|||+|.++..+++. .|+++|+++.++. ..++.+.++ .++.+...|+....
T Consensus 63 ~~ll~~l~~~~l~~--g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~-~l~~~a~~r-~nv~~i~~Da~~~~ 138 (232)
T 3id6_C 63 GAILKGLKTNPIRK--GTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVR-ELLLVAQRR-PNIFPLLADARFPQ 138 (232)
T ss_dssp HHHHTTCSCCSCCT--TCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHH-HHHHHHHHC-TTEEEEECCTTCGG
T ss_pred HHHHhhhhhcCCCC--CCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHH-HHHHHhhhc-CCeEEEEcccccch
Confidence 34444443 344 449999999999999998875 3677777664432 234455554 47788888876532
Q ss_pred ---CCCCCeeEEEeccccccCCcCCHHH-HHHHHHhcccCCeEEEEEeC
Q 006633 278 ---YPSRAFDMAHCSRCLIPWGQYADGL-YLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 278 ---fpd~sFDlV~~s~~L~h~~~~d~~~-~L~ei~RvLKPGG~Lvls~p 322 (637)
...++||+|++.... + +... ++..+.++|||||.|+++..
T Consensus 139 ~~~~~~~~~D~I~~d~a~---~--~~~~il~~~~~~~LkpGG~lvisik 182 (232)
T 3id6_C 139 SYKSVVENVDVLYVDIAQ---P--DQTDIAIYNAKFFLKVNGDMLLVIK 182 (232)
T ss_dssp GTTTTCCCEEEEEECCCC---T--THHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhhccccceEEEEecCCC---h--hHHHHHHHHHHHhCCCCeEEEEEEc
Confidence 124689999997543 3 4444 44566669999999999853
No 185
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.82 E-value=1.1e-08 Score=101.44 Aligned_cols=107 Identities=13% Similarity=0.198 Sum_probs=75.4
Q ss_pred HHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHc----CC--CeEEEEeccccC
Q 006633 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRL 276 (637)
Q Consensus 205 i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~er----g~--~~~~~~~d~~~L 276 (637)
...+..++...++. +|||+|||+|.++..|++. +..++.+ |+++.+++.|+++ +. .+.+...+....
T Consensus 43 ~~~l~~~~~~~~~~--~vLdiG~G~G~~~~~la~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 117 (233)
T 2gpy_A 43 MESLLHLLKMAAPA--RILEIGTAIGYSAIRMAQALPEATIVSI---ERDERRYEEAHKHVKALGLESRIELLFGDALQL 117 (233)
T ss_dssp HHHHHHHHHHHCCS--EEEEECCTTSHHHHHHHHHCTTCEEEEE---CCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGS
T ss_pred HHHHHHHHhccCCC--EEEEecCCCcHHHHHHHHHCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH
Confidence 33444555444443 9999999999999999887 4444444 4455555555443 43 477887776653
Q ss_pred -CCC--CCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 277 -PYP--SRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 277 -pfp--d~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+.. +++||+|++.... . +...++.++.++|||||.+++..
T Consensus 118 ~~~~~~~~~fD~I~~~~~~----~-~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 118 GEKLELYPLFDVLFIDAAK----G-QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp HHHHTTSCCEEEEEEEGGG----S-CHHHHHHHHGGGEEEEEEEEEET
T ss_pred HHhcccCCCccEEEECCCH----H-HHHHHHHHHHHHcCCCeEEEEEc
Confidence 432 5789999987643 2 67889999999999999999974
No 186
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.82 E-value=3.2e-08 Score=97.00 Aligned_cols=95 Identities=15% Similarity=0.128 Sum_probs=66.3
Q ss_pred CEEEEECCCCchHHHHHhhc---CCEEEEcCccccHHHHHHHHHH----cCC--CeEEEEeccccC-C-CC---CCCeeE
Q 006633 220 RTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALE----RGV--PALIGVMASIRL-P-YP---SRAFDM 285 (637)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~---~v~~vdisp~Dls~a~i~~A~e----rg~--~~~~~~~d~~~L-p-fp---d~sFDl 285 (637)
.+|||||||+|.++..|++. +..++.+ |+++.+++.|++ .+. .+.+..+|.... + ++ .++||+
T Consensus 60 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~ 136 (223)
T 3duw_A 60 RNILEIGTLGGYSTIWLARGLSSGGRVVTL---EASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDF 136 (223)
T ss_dssp SEEEEECCTTSHHHHHHHTTCCSSCEEEEE---ESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSE
T ss_pred CEEEEecCCccHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCE
Confidence 48999999999999999987 4344433 334444444432 233 378888776442 1 11 267999
Q ss_pred EEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 286 AHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 286 V~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
|++... .. ....++.++.++|||||.+++...
T Consensus 137 v~~d~~----~~-~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 137 IFIDAD----KQ-NNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp EEECSC----GG-GHHHHHHHHHHTCCTTCEEEEESC
T ss_pred EEEcCC----cH-HHHHHHHHHHHhcCCCcEEEEeCC
Confidence 998653 22 567899999999999999998754
No 187
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.81 E-value=2.4e-08 Score=105.83 Aligned_cols=116 Identities=16% Similarity=0.027 Sum_probs=81.4
Q ss_pred HHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc-----CCEEEEcCccccHHHHHHHHHHcCC-CeEEEEeccccCC
Q 006633 204 YIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-----NILAVSFAPRDTHEAQVQFALERGV-PALIGVMASIRLP 277 (637)
Q Consensus 204 ~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-----~v~~vdisp~Dls~a~i~~A~erg~-~~~~~~~d~~~Lp 277 (637)
....+..++...++ .+|||+|||+|.++..++.. .++++|+++..+..+..+ +...++ .+.+...|...++
T Consensus 191 la~~l~~~~~~~~~--~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n-~~~~g~~~i~~~~~D~~~~~ 267 (354)
T 3tma_A 191 LAQALLRLADARPG--MRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREA-ALASGLSWIRFLRADARHLP 267 (354)
T ss_dssp HHHHHHHHTTCCTT--CCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHH-HHHTTCTTCEEEECCGGGGG
T ss_pred HHHHHHHHhCCCCC--CEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHH-HHHcCCCceEEEeCChhhCc
Confidence 44455555554444 48999999999999988874 466676665444433332 223344 5889999999988
Q ss_pred CCCCCeeEEEeccccccCCcC------CHHHHHHHHHhcccCCeEEEEEeC
Q 006633 278 YPSRAFDMAHCSRCLIPWGQY------ADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 278 fpd~sFDlV~~s~~L~h~~~~------d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.+.+.||+|+++..+.....+ ....++.++.++|||||.+++..+
T Consensus 268 ~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 268 RFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp GTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred cccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 877889999997654221110 126789999999999999999875
No 188
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.81 E-value=2.3e-07 Score=99.66 Aligned_cols=114 Identities=15% Similarity=0.099 Sum_probs=73.7
Q ss_pred ceeEeeecccchhhhhhhcCCC-eEEEEeccCCCCcchhHHHHhh----cccc---hhhccccccCCCC-Cccceeeecc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDP-LWVMNTVPVEAKINTLGVIYER----GLIG---TYQNWCEAMSTYP-RTYDLIHADS 548 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~-v~~mnv~~~~~~~~~l~~~~eR----gl~~---~~~~wce~~~~yp-~t~Dl~H~~~ 548 (637)
..+|||+|||+|.++.+|++.. - ..|+.+|.++.++..+.++ |+-. +--.+...+..+| .+||+|-++.
T Consensus 223 ~~~VLDlGcG~G~~s~~la~~~p~--~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~np 300 (375)
T 4dcm_A 223 EGEIVDLGCGNGVIGLTLLDKNPQ--AKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNP 300 (375)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTT--CEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEECC
T ss_pred CCeEEEEeCcchHHHHHHHHHCCC--CEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEECC
Confidence 3789999999999999998762 1 2455666666677666543 4321 1002233444555 7999999988
Q ss_pred ccccC--CCCcCHHHHHHHHhhcccCCcEEEEEeCH--HHHHHHHHHHh
Q 006633 549 IFSLY--KDRCEMEDVLLEMDRILRPEGSVIIRDDV--DILVKIKSITD 593 (637)
Q Consensus 549 lfs~~--~~~c~~~~~l~e~dRiLrPgG~~i~~d~~--~~~~~~~~~~~ 593 (637)
.|... ..+-....+|-++-|+|||||.++|..+. .....++++..
T Consensus 301 pfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~~~~~~l~~~fg 349 (375)
T 4dcm_A 301 PFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFG 349 (375)
T ss_dssp CC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS
T ss_pred CcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCcCHHHHHHHhcC
Confidence 87532 22333457899999999999999996432 34455555554
No 189
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.80 E-value=1.7e-08 Score=101.31 Aligned_cols=103 Identities=19% Similarity=0.156 Sum_probs=69.1
Q ss_pred CCEEEEECCCCchHHHHHhhcC----CEEEEcCccccHHHHHHHHHHc-------C-CCeEEEEecccc-CC--CCCCCe
Q 006633 219 IRTAIDTGCGVASWGAYLMSRN----ILAVSFAPRDTHEAQVQFALER-------G-VPALIGVMASIR-LP--YPSRAF 283 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~----v~~vdisp~Dls~a~i~~A~er-------g-~~~~~~~~d~~~-Lp--fpd~sF 283 (637)
+.+|||||||+|.++..|++.+ ++++|+++..+..+..+....+ + .++.+..+|+.. ++ +++++|
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~ 129 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQL 129 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCE
T ss_pred CCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccccc
Confidence 3489999999999999998862 5566655443333222222110 3 368888888775 66 778999
Q ss_pred eEEEeccccccCCcC-------CHHHHHHHHHhcccCCeEEEEEeC
Q 006633 284 DMAHCSRCLIPWGQY-------ADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 284 DlV~~s~~L~h~~~~-------d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
|.|+....- +|... -...++.++.++|||||.|++...
T Consensus 130 d~v~~~~p~-p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 130 SKMFFCFPD-PHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp EEEEEESCC-CC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred CEEEEECCC-cccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 999864321 22210 014799999999999999999753
No 190
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.79 E-value=1.5e-08 Score=106.39 Aligned_cols=104 Identities=14% Similarity=0.144 Sum_probs=69.8
Q ss_pred HHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc-C----CEEEEcCccccHHHHHHHHHHc----------------C
Q 006633 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-N----ILAVSFAPRDTHEAQVQFALER----------------G 263 (637)
Q Consensus 205 i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-~----v~~vdisp~Dls~a~i~~A~er----------------g 263 (637)
...+.+.+...++. +|||+|||+|.++..|++. + ++++|++ +.+++.|+++ .
T Consensus 94 ~~~~l~~l~~~~g~--~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~-----~~~~~~a~~~~~~~~~~~~ln~~~~~~ 166 (336)
T 2b25_A 94 INMILSMMDINPGD--TVLEAGSGSGGMSLFLSKAVGSQGRVISFEVR-----KDHHDLAKKNYKHWRDSWKLSHVEEWP 166 (336)
T ss_dssp HHHHHHHHTCCTTC--EEEEECCTTSHHHHHHHHHHCTTCEEEEEESS-----HHHHHHHHHHHHHHHHHHTTTCSSCCC
T ss_pred HHHHHHhcCCCCCC--EEEEeCCCcCHHHHHHHHHhCCCceEEEEeCC-----HHHHHHHHHHHHHhhcccccccccccC
Confidence 34455565555544 9999999999999999876 3 4555554 4444444332 1
Q ss_pred CCeEEEEeccccC--CCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 264 VPALIGVMASIRL--PYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 264 ~~~~~~~~d~~~L--pfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.++.+...|...+ ++++++||+|++... ++..++.++.++|||||.|++..+
T Consensus 167 ~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~-------~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 167 DNVDFIHKDISGATEDIKSLTFDAVALDML-------NPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp CCEEEEESCTTCCC-------EEEEEECSS-------STTTTHHHHGGGEEEEEEEEEEES
T ss_pred CceEEEECChHHcccccCCCCeeEEEECCC-------CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 3578888888776 567788999998532 233488999999999999999865
No 191
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.78 E-value=3.2e-08 Score=103.59 Aligned_cols=108 Identities=19% Similarity=0.144 Sum_probs=72.9
Q ss_pred HHHHhcccCCCCCEEEEECCCCchHHHHHhhc---C--CEEEEcCccccHHHHHHHHHH----cCC-CeEEEEeccccCC
Q 006633 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---N--ILAVSFAPRDTHEAQVQFALE----RGV-PALIGVMASIRLP 277 (637)
Q Consensus 208 L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~---~--v~~vdisp~Dls~a~i~~A~e----rg~-~~~~~~~d~~~Lp 277 (637)
+..++...++. +|||+|||+|..+..|++. + ++++|+ ++.+++.+++ .+. ++.+...|...++
T Consensus 110 ~~~~l~~~~g~--~VLDlg~G~G~~t~~la~~~~~~~~v~avD~-----s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~ 182 (315)
T 1ixk_A 110 PPVALDPKPGE--IVADMAAAPGGKTSYLAQLMRNDGVIYAFDV-----DENRLRETRLNLSRLGVLNVILFHSSSLHIG 182 (315)
T ss_dssp HHHHHCCCTTC--EEEECCSSCSHHHHHHHHHTTTCSEEEEECS-----CHHHHHHHHHHHHHHTCCSEEEESSCGGGGG
T ss_pred HHHHhCCCCCC--EEEEeCCCCCHHHHHHHHHhCCCCEEEEEcC-----CHHHHHHHHHHHHHhCCCeEEEEECChhhcc
Confidence 44555555544 9999999999999999874 2 455555 4444444433 244 6788888887776
Q ss_pred CCCCCeeEEEecc------ccccCC-------cC-------CHHHHHHHHHhcccCCeEEEEEeC
Q 006633 278 YPSRAFDMAHCSR------CLIPWG-------QY-------ADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 278 fpd~sFDlV~~s~------~L~h~~-------~~-------d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
..+++||+|++.. ++.+.+ .+ ....+|.++.++|||||.+++++.
T Consensus 183 ~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 183 ELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp GGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred cccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 5567899999832 221111 10 115889999999999999999864
No 192
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.78 E-value=5.8e-09 Score=99.57 Aligned_cols=118 Identities=15% Similarity=0.225 Sum_probs=83.2
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc--cchhh-ccccccCCCCCccceeeecccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTYPRTYDLIHADSIF 550 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~-~wce~~~~yp~t~Dl~H~~~lf 550 (637)
..+|||+|||.|.++..|++.+. +|+.+|.++.++..+.++ |+ +-.++ |.. .+.. +.+||+|.+.++|
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~-~~~~-~~~~D~v~~~~~l 107 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANGY---DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLN-NLTF-DRQYDFILSTVVL 107 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGG-GCCC-CCCEEEEEEESCG
T ss_pred CCeEEEEcCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchh-hCCC-CCCceEEEEcchh
Confidence 45999999999999999988754 667777776777777654 33 22222 222 2222 7899999998887
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH--------------HHHHHHHHHHhcCCceeEEec
Q 006633 551 SLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV--------------DILVKIKSITDGMEWEGRIAD 603 (637)
Q Consensus 551 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~--------------~~~~~~~~~~~~~~W~~~~~~ 603 (637)
.... .-+...+|-++.|+|+|||.+++.+.. -....++++++. |++....
T Consensus 108 ~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~ 171 (199)
T 2xvm_A 108 MFLE-AKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYN 171 (199)
T ss_dssp GGSC-GGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred hhCC-HHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEec
Confidence 7543 235689999999999999998875311 033566777776 8776543
No 193
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.78 E-value=7.2e-09 Score=101.01 Aligned_cols=133 Identities=14% Similarity=0.205 Sum_probs=93.3
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc--cchhhccccccCC--CCCccceeeecccccc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL--IGTYQNWCEAMST--YPRTYDLIHADSIFSL 552 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl--~~~~~~wce~~~~--yp~t~Dl~H~~~lfs~ 552 (637)
...+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++-- +..+. ..+.. ++.+||+|.+.++|..
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~---~d~~~~~~~~~fD~v~~~~~l~~ 118 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGR---TVYGIEPSREMRMIAKEKLPKEFSITE---GDFLSFEVPTSIDTIVSTYAFHH 118 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTC---EEEEECSCHHHHHHHHHHSCTTCCEES---CCSSSCCCCSCCSEEEEESCGGG
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCC---eEEEEeCCHHHHHHHHHhCCCceEEEe---CChhhcCCCCCeEEEEECcchhc
Confidence 467899999999999999988854 67777887788888888732 22222 22222 3389999999888875
Q ss_pred CCCCcCHHHHHHHHhhcccCCcEEEEEeCH----H---------------------------HHHHHHHHHhcCCceeEE
Q 006633 553 YKDRCEMEDVLLEMDRILRPEGSVIIRDDV----D---------------------------ILVKIKSITDGMEWEGRI 601 (637)
Q Consensus 553 ~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~----~---------------------------~~~~~~~~~~~~~W~~~~ 601 (637)
..+. ....+|.|+-|+|||||.+++.+.. . ....++++++.-.+++..
T Consensus 119 ~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~ 197 (220)
T 3hnr_A 119 LTDD-EKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTF 197 (220)
T ss_dssp SCHH-HHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEE
T ss_pred CChH-HHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEE
Confidence 5432 1234999999999999999998521 1 125677788888887765
Q ss_pred eccCCCCCCcceEEEEEec
Q 006633 602 ADHENGPRQREKILFANKK 620 (637)
Q Consensus 602 ~~~e~~~~~~~~~l~~~K~ 620 (637)
.... .-.-++.++|+
T Consensus 198 ~~~~----~~~w~~~~~~~ 212 (220)
T 3hnr_A 198 TRLN----HFVWVMEATKQ 212 (220)
T ss_dssp EECS----SSEEEEEEEEC
T ss_pred eecc----ceEEEEeehhh
Confidence 5433 23456666664
No 194
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.77 E-value=1.2e-08 Score=98.35 Aligned_cols=136 Identities=11% Similarity=0.066 Sum_probs=99.0
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc-cchhh-ccccccCCCCCccceeeeccccccCCC
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IGTYQ-NWCEAMSTYPRTYDLIHADSIFSLYKD 555 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-~~~~~-~wce~~~~yp~t~Dl~H~~~lfs~~~~ 555 (637)
..+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++.- +..+. |. +.++.-+.+||+|.+.++|....
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~l~~~~- 116 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH---QIEGLEPATRLVELARQTHPSVTFHHGTI-TDLSDSPKRWAGLLAWYSLIHMG- 116 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC---CEEEECCCHHHHHHHHHHCTTSEEECCCG-GGGGGSCCCEEEEEEESSSTTCC-
T ss_pred CCeEEEecCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHHhCCCCeEEeCcc-cccccCCCCeEEEEehhhHhcCC-
Confidence 45899999999999999988854 56667777789999988732 22222 22 22322238999999988777543
Q ss_pred CcCHHHHHHHHhhcccCCcEEEEEeCH----------------HHHHHHHHHHhcCCceeEEeccCCCCCCcceEEEEEe
Q 006633 556 RCEMEDVLLEMDRILRPEGSVIIRDDV----------------DILVKIKSITDGMEWEGRIADHENGPRQREKILFANK 619 (637)
Q Consensus 556 ~c~~~~~l~e~dRiLrPgG~~i~~d~~----------------~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~K 619 (637)
.-+...+|-++-|+|||||.+++.+.. -....++++++...|++.......+ .+...|...|
T Consensus 117 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~--~p~~~l~~~~ 194 (203)
T 3h2b_A 117 PGELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR--FPHAYLTAEA 194 (203)
T ss_dssp TTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT--SSEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC--Ccchhhhhhh
Confidence 336789999999999999999998521 1357888899999999887665544 4556665555
Q ss_pred c
Q 006633 620 K 620 (637)
Q Consensus 620 ~ 620 (637)
+
T Consensus 195 ~ 195 (203)
T 3h2b_A 195 S 195 (203)
T ss_dssp C
T ss_pred h
Confidence 3
No 195
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.77 E-value=1.2e-08 Score=104.07 Aligned_cols=101 Identities=14% Similarity=0.161 Sum_probs=75.9
Q ss_pred CCceeEeeecccchhhhhhhcC-CCeEEEEeccCCCCcchhHHHHhh----cccchhhccccccCCCCCccceeeecccc
Q 006633 476 GRYRNLLDMNAYLGGFAAALVD-DPLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMSTYPRTYDLIHADSIF 550 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~-~~v~~mnv~~~~~~~~~l~~~~eR----gl~~~~~~wce~~~~yp~t~Dl~H~~~lf 550 (637)
....+|||+|||.|+++.+|++ .+. +|+.+|.++.++..+.++ |+..-+.-.+..+..+|.+||+|.+.++|
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~~~~~l 139 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYDV---NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAF 139 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCG
T ss_pred CCcCEEEEECCcccHHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEEEeCch
Confidence 3467899999999999999984 454 667777777888888776 44222221223344567999999998888
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 551 SLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 551 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
..... -+...+|-|+-|+|||||.+++.+
T Consensus 140 ~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 140 EHFGH-ERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp GGTCT-TTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hhcCh-HHHHHHHHHHHHhcCCCCEEEEEE
Confidence 76532 356899999999999999999975
No 196
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.77 E-value=2.8e-08 Score=100.05 Aligned_cols=97 Identities=9% Similarity=0.053 Sum_probs=72.4
Q ss_pred CEEEEECCCCchHHHHHhhc-----CCEEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccC-CCC-----CCCeeEE
Q 006633 220 RTAIDTGCGVASWGAYLMSR-----NILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRL-PYP-----SRAFDMA 286 (637)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~-----~v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~L-pfp-----d~sFDlV 286 (637)
.+|||||||+|..+..|++. .++++|+++..+..+...+. ..+. .+.+..+|+... +.. +++||+|
T Consensus 62 ~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~-~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 62 KKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWR-EAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp SEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHH-HTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred CEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHH-HcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 48999999999999999874 47788888866655444333 3343 578888887543 221 4789999
Q ss_pred EeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 287 HCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 287 ~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++... .. +...+++++.++|||||.+++...
T Consensus 141 ~~d~~----~~-~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 141 FIDAD----KT-NYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEESC----GG-GHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEcCC----hH-HhHHHHHHHHHhcCCCeEEEEECC
Confidence 98643 22 677899999999999999999753
No 197
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.77 E-value=1.8e-08 Score=101.28 Aligned_cols=135 Identities=12% Similarity=0.064 Sum_probs=99.5
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc-cchhh-ccccccCCCCCccceeeecc-ccccCC
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IGTYQ-NWCEAMSTYPRTYDLIHADS-IFSLYK 554 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-~~~~~-~wce~~~~yp~t~Dl~H~~~-lfs~~~ 554 (637)
..+|||+|||.|.++..|++... +|+.+|.++.++..+.++.- +..+. |.. .+. ++.+||+|.+.+ +|....
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~-~~~-~~~~fD~v~~~~~~l~~~~ 125 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADSFG---TVEGLELSADMLAIARRRNPDAVLHHGDMR-DFS-LGRRFSAVTCMFSSIGHLA 125 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTTSS---EEEEEESCHHHHHHHHHHCTTSEEEECCTT-TCC-CSCCEEEEEECTTGGGGSC
T ss_pred CCcEEEeCCcCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhCCCCEEEECChH-HCC-ccCCcCEEEEcCchhhhcC
Confidence 47899999999999999998854 67777888789999888732 12222 221 222 268999999987 777665
Q ss_pred CCcCHHHHHHHHhhcccCCcEEEEEeC----------------------------------------------H------
Q 006633 555 DRCEMEDVLLEMDRILRPEGSVIIRDD----------------------------------------------V------ 582 (637)
Q Consensus 555 ~~c~~~~~l~e~dRiLrPgG~~i~~d~----------------------------------------------~------ 582 (637)
+.-++..+|-++.|+|||||.++|.+- .
T Consensus 126 ~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (263)
T 3pfg_A 126 GQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGITH 205 (263)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEEE
Confidence 545667899999999999999999520 0
Q ss_pred ---------HHHHHHHHHHhcCCceeEEeccCCCCCCcceEEEEEec
Q 006633 583 ---------DILVKIKSITDGMEWEGRIADHENGPRQREKILFANKK 620 (637)
Q Consensus 583 ---------~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~K~ 620 (637)
-....++++++.-.+++..+... .....+++++|+
T Consensus 206 ~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~---~~~~~~~va~K~ 249 (263)
T 3pfg_A 206 HEESHRITLFTREQYERAFTAAGLSVEFMPGG---PSGRGLFTGLPG 249 (263)
T ss_dssp EEEEEEEECCCHHHHHHHHHHTTEEEEEESST---TTSSCEEEEEEC
T ss_pred EEEEEEEEeecHHHHHHHHHHCCCEEEEeeCC---CCCceeEEEecC
Confidence 02578889988888887765333 235678999997
No 198
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.77 E-value=1.7e-08 Score=98.28 Aligned_cols=91 Identities=12% Similarity=0.127 Sum_probs=66.2
Q ss_pred CEEEEECCCCchHHHHHhhc---C--CEEEEcCccccHHHHHHHHHHc----CC--CeEEEEeccccC-CCCCCCeeEEE
Q 006633 220 RTAIDTGCGVASWGAYLMSR---N--ILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIRL-PYPSRAFDMAH 287 (637)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~---~--v~~vdisp~Dls~a~i~~A~er----g~--~~~~~~~d~~~L-pfpd~sFDlV~ 287 (637)
.+|||||||+|..+..|++. + ++++|+ ++.+++.|+++ +. .+.+..++.... +..++ ||+|+
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~-----~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~ 131 (210)
T 3c3p_A 58 QLVVVPGDGLGCASWWFARAISISSRVVMIDP-----DRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILF 131 (210)
T ss_dssp SEEEEESCGGGHHHHHHHTTSCTTCEEEEEES-----CHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEEC-----CHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEE
Confidence 48999999999999999876 3 445555 44444444432 32 377887776543 55456 99999
Q ss_pred eccccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 288 CSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 288 ~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+... . . +...+++++.++|||||.+++..
T Consensus 132 ~~~~---~-~-~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 132 MDCD---V-F-NGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp EETT---T-S-CHHHHHHHHGGGEEEEEEEEEES
T ss_pred EcCC---h-h-hhHHHHHHHHHhcCCCeEEEEEC
Confidence 8632 2 2 67889999999999999999864
No 199
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.76 E-value=3.2e-09 Score=106.59 Aligned_cols=101 Identities=14% Similarity=0.150 Sum_probs=61.0
Q ss_pred CCEEEEECCCCchHHHHHhhc----CCEEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccC---CCC---CCCeeEE
Q 006633 219 IRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRL---PYP---SRAFDMA 286 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~----~v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~L---pfp---d~sFDlV 286 (637)
+.+|||+|||+|.++..|+++ .++++|+++.++..+..+. ...+. .+.+..+|.... +++ +++||+|
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~-~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNV-EQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHH-HHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHH-HHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 459999999999999888875 3555655544333332222 22343 278888876542 454 3689999
Q ss_pred EeccccccCCc-------------CCHHHHHHHHHhcccCCeEEEEE
Q 006633 287 HCSRCLIPWGQ-------------YADGLYLIEVDRVLRPGGYWILS 320 (637)
Q Consensus 287 ~~s~~L~h~~~-------------~d~~~~L~ei~RvLKPGG~Lvls 320 (637)
+++..+++... +....++.++.|+|||||.+.+.
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 99876644320 01224567888999999887664
No 200
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.76 E-value=2.6e-08 Score=97.28 Aligned_cols=140 Identities=11% Similarity=0.125 Sum_probs=93.8
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhc----c-------cchhh-ccccccCCCCCccceee
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG----L-------IGTYQ-NWCEAMSTYPRTYDLIH 545 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg----l-------~~~~~-~wce~~~~yp~t~Dl~H 545 (637)
..+|||+|||.|.++.+|++..- ..+|+.+|.++.++..+.++- + +..+. |. +....-+.+||+|.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSL-VYRDKRFSGYDAAT 107 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCS-SSCCGGGTTCSEEE
T ss_pred CCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcc-cccccccCCCCEEE
Confidence 56899999999999999987631 135667777778888887762 1 22222 22 11111237999999
Q ss_pred eccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCHHH----------------------HHHHH----HHHhcCCcee
Q 006633 546 ADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDVDI----------------------LVKIK----SITDGMEWEG 599 (637)
Q Consensus 546 ~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~~----------------------~~~~~----~~~~~~~W~~ 599 (637)
+..++.... .-++..+|-++-|+|||||.+++....+. ...++ ++++.-.+++
T Consensus 108 ~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v 186 (219)
T 3jwg_A 108 VIEVIEHLD-ENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSV 186 (219)
T ss_dssp EESCGGGCC-HHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEE
T ss_pred EHHHHHhCC-HHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEE
Confidence 988887653 22346899999999999998887643321 12333 7777777888
Q ss_pred EEeccC---CCCCCcceEEEEEec
Q 006633 600 RIADHE---NGPRQREKILFANKK 620 (637)
Q Consensus 600 ~~~~~e---~~~~~~~~~l~~~K~ 620 (637)
.....- ..--.+.+|.|++|.
T Consensus 187 ~~~~~g~~~~~~g~~~qi~~~~~~ 210 (219)
T 3jwg_A 187 RFLQIGEIDDEFGSPTQMGVFTLG 210 (219)
T ss_dssp EEEEESCCCTTSCCSEEEEEEEEC
T ss_pred EEEecCCccccCCCCeEEEEEecc
Confidence 765322 122247899999995
No 201
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.75 E-value=2.4e-08 Score=98.38 Aligned_cols=94 Identities=9% Similarity=0.074 Sum_probs=64.7
Q ss_pred CCEEEEECCCCchHHHHHhhc-----CCEEEEcCccccHHHHHHHHHH---cCCCeEEEEeccccCC---CCCCCeeEEE
Q 006633 219 IRTAIDTGCGVASWGAYLMSR-----NILAVSFAPRDTHEAQVQFALE---RGVPALIGVMASIRLP---YPSRAFDMAH 287 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~-----~v~~vdisp~Dls~a~i~~A~e---rg~~~~~~~~d~~~Lp---fpd~sFDlV~ 287 (637)
+.+|||+|||+|.++..|+++ .++++|+ ++.+++.+.+ ...++.+...|..... ...++||+|+
T Consensus 74 ~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~-----s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~ 148 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVSDIVGWEGKIFGIEF-----SPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIF 148 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHHCTTSEEEEEES-----CHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred CCEEEEEeccCCHHHHHHHHHhCCCeEEEEEEC-----CHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEE
Confidence 449999999999999999875 2445554 4444433322 1246788888876521 1245899999
Q ss_pred eccccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 288 CSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 288 ~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+... ... ....++.++.++|||||.+++..
T Consensus 149 ~~~~---~~~-~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 149 EDVA---QPT-QAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp ECCC---STT-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCC---CHh-HHHHHHHHHHHhcCCCCEEEEEE
Confidence 8653 221 23455999999999999999983
No 202
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.75 E-value=1.3e-07 Score=94.09 Aligned_cols=105 Identities=15% Similarity=0.202 Sum_probs=70.4
Q ss_pred HHHHHhcccCCCCCEEEEECCCCchHHHHHhhc---CCEEEEcCccccHHHHHHHHHHc----CC--CeEEEEecccc-C
Q 006633 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASIR-L 276 (637)
Q Consensus 207 ~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~---~v~~vdisp~Dls~a~i~~A~er----g~--~~~~~~~d~~~-L 276 (637)
.+..++...++ .+|||||||+|.++..|++. +..++.+ |+++.+++.|+++ +. .+.+..++... +
T Consensus 51 ~l~~l~~~~~~--~~VLdiG~G~G~~~~~la~~~~~~~~v~~v---D~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~ 125 (239)
T 2hnk_A 51 FLNILTKISGA--KRIIEIGTFTGYSSLCFASALPEDGKILCC---DVSEEWTNVARKYWKENGLENKIFLKLGSALETL 125 (239)
T ss_dssp HHHHHHHHHTC--SEEEEECCTTCHHHHHHHHHSCTTCEEEEE---ESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHH
T ss_pred HHHHHHHhhCc--CEEEEEeCCCCHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHH
Confidence 34444444443 38999999999999999876 3333333 3344444444432 33 26777776543 1
Q ss_pred C--------------CCC--CCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 277 P--------------YPS--RAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 277 p--------------fpd--~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+ |++ ++||+|++.... . +...++.++.++|||||.+++..
T Consensus 126 ~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~----~-~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 126 QVLIDSKSAPSWASDFAFGPSSIDLFFLDADK----E-NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp HHHHHCSSCCGGGTTTCCSTTCEEEEEECSCG----G-GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHhhcccccccccccCCCCCcCEEEEeCCH----H-HHHHHHHHHHHHcCCCeEEEEEc
Confidence 2 333 789999987532 2 56689999999999999999975
No 203
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.75 E-value=1.2e-08 Score=105.07 Aligned_cols=102 Identities=12% Similarity=0.121 Sum_probs=76.9
Q ss_pred CCceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----cccchhhccccccCCCCCccceeeecccc
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMSTYPRTYDLIHADSIF 550 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl~~~~~~wce~~~~yp~t~Dl~H~~~lf 550 (637)
....+|||+|||.|+++.+|++. + .+|+.+|.++.++..+.++ |+-+-++-.+..+..++.+||+|.+.++|
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~~ 147 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD---VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIVSLGAF 147 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC---CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEEEEESCG
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCccEEEEcchH
Confidence 44678999999999999999887 6 3577778777888888776 44221221222223348999999999888
Q ss_pred ccCCCC------cCHHHHHHHHhhcccCCcEEEEEe
Q 006633 551 SLYKDR------CEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 551 s~~~~~------c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
....+. -+.+.+|-++.|+|||||.++|.+
T Consensus 148 ~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 148 EHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp GGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred HhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 766432 456899999999999999999975
No 204
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.75 E-value=1.4e-08 Score=107.58 Aligned_cols=95 Identities=14% Similarity=0.108 Sum_probs=73.8
Q ss_pred CEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccCCc
Q 006633 220 RTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQ 297 (637)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~ 297 (637)
.+|||||||+|.++..++++ ++.++.+ |+ ..+++.+++ ...+.+...|... +++ .||+|++..+++||.+
T Consensus 195 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~---D~-~~~~~~a~~-~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d 266 (358)
T 1zg3_A 195 ESLVDVGGGTGGVTKLIHEIFPHLKCTVF---DQ-PQVVGNLTG-NENLNFVGGDMFK-SIP--SADAVLLKWVLHDWND 266 (358)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTSEEEEE---EC-HHHHSSCCC-CSSEEEEECCTTT-CCC--CCSEEEEESCGGGSCH
T ss_pred CEEEEECCCcCHHHHHHHHHCCCCeEEEe---cc-HHHHhhccc-CCCcEEEeCccCC-CCC--CceEEEEcccccCCCH
Confidence 49999999999999999987 5556655 55 355555543 2347888888766 666 4999999999988984
Q ss_pred CCHHHHHHHHHhcccC---CeEEEEEeC
Q 006633 298 YADGLYLIEVDRVLRP---GGYWILSGP 322 (637)
Q Consensus 298 ~d~~~~L~ei~RvLKP---GG~Lvls~p 322 (637)
++...+|+++.++||| ||++++..+
T Consensus 267 ~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 267 EQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp HHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 2233999999999999 999999764
No 205
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.75 E-value=7.3e-08 Score=98.65 Aligned_cols=96 Identities=10% Similarity=0.015 Sum_probs=70.5
Q ss_pred CCEEEEECCCCchHHHHHhhc----CCEEEEcCccccHHHHHHHHHHcCC-CeEEEEeccccCCCCCCCeeEEEeccccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFALERGV-PALIGVMASIRLPYPSRAFDMAHCSRCLI 293 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~----~v~~vdisp~Dls~a~i~~A~erg~-~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~ 293 (637)
+.+|||+|||+|.++..++++ .++++|+++..+..+..+ +..++. ++.+..+|...++. .++||+|++....
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n-~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~- 196 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCEN-IKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH- 196 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHH-HHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS-
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH-HHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc-
Confidence 349999999999999999986 355666655433333222 223343 57788888877744 6789999987643
Q ss_pred cCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 294 PWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 294 h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+...++.++.++|||||.++++..
T Consensus 197 -----~~~~~l~~~~~~LkpgG~l~~s~~ 220 (272)
T 3a27_A 197 -----KTHKFLDKTFEFLKDRGVIHYHET 220 (272)
T ss_dssp -----SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred -----cHHHHHHHHHHHcCCCCEEEEEEc
Confidence 456689999999999999999864
No 206
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.74 E-value=2.5e-09 Score=120.79 Aligned_cols=101 Identities=14% Similarity=0.067 Sum_probs=75.8
Q ss_pred CCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHH----HcC-CCeEEEEeccccC--CCCCCCeeEEEecc
Q 006633 218 SIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFAL----ERG-VPALIGVMASIRL--PYPSRAFDMAHCSR 290 (637)
Q Consensus 218 ~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~----erg-~~~~~~~~d~~~L--pfpd~sFDlV~~s~ 290 (637)
.+.+|||||||.|.++..|+++|..++++ |.++.+++.|+ +.+ .++.+.+.+++.+ ++++++||+|+|..
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~gi---D~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e 142 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGI---DFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLS 142 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEES
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEE---CCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECc
Confidence 34589999999999999999998766666 55666665554 344 5788999988887 56788999999999
Q ss_pred ccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 291 CLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 291 ~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+++|+.+.+....+..+.+.|+++|..++..
T Consensus 143 ~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 143 VFHHIVHLHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp CHHHHHHHHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred chhcCCCHHHHHHHHHHHHHhccccceeeEE
Confidence 9999983211233556777788887666653
No 207
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.74 E-value=1.8e-08 Score=98.11 Aligned_cols=99 Identities=18% Similarity=0.319 Sum_probs=77.7
Q ss_pred CCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc----cchhhccccccCCC--CCccceeeeccc
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL----IGTYQNWCEAMSTY--PRTYDLIHADSI 549 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl----~~~~~~wce~~~~y--p~t~Dl~H~~~l 549 (637)
....+|||+|||.|.++.+|++.. .+|+.+|.++.++..+.++.- +..++ ..+..+ +.+||+|.+.++
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~---~d~~~~~~~~~fD~v~~~~~ 123 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWSHISWAA---TDILQFSTAELFDLIVVAEV 123 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCSSEEEEE---CCTTTCCCSCCEEEEEEESC
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCCCeEEEE---cchhhCCCCCCccEEEEccH
Confidence 567899999999999999999884 478888888889988888742 22222 222223 489999999988
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 550 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 550 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
|....+.-.+..+|-++-|+|||||.+++.+
T Consensus 124 l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 154 (216)
T 3ofk_A 124 LYYLEDMTQMRTAIDNMVKMLAPGGHLVFGS 154 (216)
T ss_dssp GGGSSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHhCCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 8766655555688999999999999999975
No 208
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.73 E-value=1.6e-08 Score=96.04 Aligned_cols=139 Identities=12% Similarity=0.049 Sum_probs=89.2
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc--cchhhccccccCCC-CCccceeeec-cc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQNWCEAMSTY-PRTYDLIHAD-SI 549 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~~wce~~~~y-p~t~Dl~H~~-~l 549 (637)
..+|||+|||+|.++.+|++.. -.|+.+|.++.++..+.++ |+ +-..++-.+.+..+ +.+||+|.++ +.
T Consensus 23 ~~~vLDiGcG~G~~~~~la~~~---~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 23 ESIVVDATMGNGNDTAFLAGLS---KKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp TCEEEESCCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCEEEEEcCCCCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 5689999999999999999883 4667778887888887665 44 33444333444445 4889999765 32
Q ss_pred cccC-----CCCcCHHHHHHHHhhcccCCcEEEEEeC------HHHHHHHHHHHhcCC---ceeEEeccCCCCCCcceEE
Q 006633 550 FSLY-----KDRCEMEDVLLEMDRILRPEGSVIIRDD------VDILVKIKSITDGME---WEGRIADHENGPRQREKIL 615 (637)
Q Consensus 550 fs~~-----~~~c~~~~~l~e~dRiLrPgG~~i~~d~------~~~~~~~~~~~~~~~---W~~~~~~~e~~~~~~~~~l 615 (637)
+... ...-.....|-|+-|+|||||.+++..- .+....+.+.++.+. |.+.....-+....+..++
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 179 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLNQINTPPFLV 179 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESSCSSCCCEEE
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhccCCCCCeEE
Confidence 2210 0112234778999999999999999642 234455666666555 7766554444333445566
Q ss_pred EEEe
Q 006633 616 FANK 619 (637)
Q Consensus 616 ~~~K 619 (637)
+..|
T Consensus 180 ~i~~ 183 (185)
T 3mti_A 180 MLEK 183 (185)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6555
No 209
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.73 E-value=8.8e-08 Score=93.20 Aligned_cols=149 Identities=13% Similarity=0.115 Sum_probs=97.9
Q ss_pred hcchhhHHHHHHHHHHHHH------------hhhccCCCCCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhH
Q 006633 449 EMFREDTALWKKRVTYYKS------------VDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLG 516 (637)
Q Consensus 449 ~~f~~d~~~w~~~v~~y~~------------~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~ 516 (637)
+.|.++...|......|.. ++..+.......+|||+|||.|.++..|. ..|..+-+.+.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~-~~v~~~D~s~~-------- 97 (215)
T 2zfu_A 27 RLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSIR-NPVHCFDLASL-------- 97 (215)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHTSCTTSCEEEETCTTCHHHHHCC-SCEEEEESSCS--------
T ss_pred HHHHHhHHHHHHHHHHHHhhhcccchhHHHHHHHHHhccCCCCeEEEECCcCCHHHHHhh-ccEEEEeCCCC--------
Confidence 4566777777765555543 22222211345789999999999999885 44544444332
Q ss_pred HHHhhcccchhhccccccCCCC-CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCHH---HHHHHHHHH
Q 006633 517 VIYERGLIGTYQNWCEAMSTYP-RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDVD---ILVKIKSIT 592 (637)
Q Consensus 517 ~~~eRgl~~~~~~wce~~~~yp-~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~---~~~~~~~~~ 592 (637)
. +.+...-.+.+ ++| .+||+|.+..++. . -+...+|.|+.|+|+|||.+++.+... ....+.+++
T Consensus 98 -----~-~~~~~~d~~~~-~~~~~~fD~v~~~~~l~-~---~~~~~~l~~~~~~L~~gG~l~i~~~~~~~~~~~~~~~~l 166 (215)
T 2zfu_A 98 -----D-PRVTVCDMAQV-PLEDESVDVAVFCLSLM-G---TNIRDFLEEANRVLKPGGLLKVAEVSSRFEDVRTFLRAV 166 (215)
T ss_dssp -----S-TTEEESCTTSC-SCCTTCEEEEEEESCCC-S---SCHHHHHHHHHHHEEEEEEEEEEECGGGCSCHHHHHHHH
T ss_pred -----C-ceEEEeccccC-CCCCCCEeEEEEehhcc-c---cCHHHHHHHHHHhCCCCeEEEEEEcCCCCCCHHHHHHHH
Confidence 1 11111111222 344 7999999987773 1 467899999999999999999987554 457788888
Q ss_pred hcCCceeEEeccCCCCCCcceEEEEEec
Q 006633 593 DGMEWEGRIADHENGPRQREKILFANKK 620 (637)
Q Consensus 593 ~~~~W~~~~~~~e~~~~~~~~~l~~~K~ 620 (637)
+...++....+...+ .-.+++++|.
T Consensus 167 ~~~Gf~~~~~~~~~~---~~~~~~~~k~ 191 (215)
T 2zfu_A 167 TKLGFKIVSKDLTNS---HFFLFDFQKT 191 (215)
T ss_dssp HHTTEEEEEEECCST---TCEEEEEEEC
T ss_pred HHCCCEEEEEecCCC---eEEEEEEEec
Confidence 888888776544322 3478888886
No 210
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.73 E-value=2.6e-08 Score=93.18 Aligned_cols=132 Identities=17% Similarity=0.171 Sum_probs=94.0
Q ss_pred CCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcccchhhccccccCCCC-CccceeeeccccccCC
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMSTYP-RTYDLIHADSIFSLYK 554 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~~wce~~~~yp-~t~Dl~H~~~lfs~~~ 554 (637)
....+|||+|||.|.++.+|.+.. . +|..+|.++.++..+.++ . .-+.-.+.. .++| .+||+|.+..++....
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~--~-~v~~vD~s~~~~~~a~~~-~-~~v~~~~~d-~~~~~~~~D~v~~~~~l~~~~ 89 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA--T-KLYCIDINVIALKEVKEK-F-DSVITLSDP-KEIPDNSVDFILFANSFHDMD 89 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE--E-EEEEECSCHHHHHHHHHH-C-TTSEEESSG-GGSCTTCEEEEEEESCSTTCS
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc--C-eEEEEeCCHHHHHHHHHh-C-CCcEEEeCC-CCCCCCceEEEEEccchhccc
Confidence 346899999999999999999885 2 788888888899999888 2 212111222 4555 7999999988887654
Q ss_pred CCcCHHHHHHHHhhcccCCcEEEEEeCHH-------------HHHHHHHHHhcCCceeEEeccCCCCCCcceEEEEEecC
Q 006633 555 DRCEMEDVLLEMDRILRPEGSVIIRDDVD-------------ILVKIKSITDGMEWEGRIADHENGPRQREKILFANKKY 621 (637)
Q Consensus 555 ~~c~~~~~l~e~dRiLrPgG~~i~~d~~~-------------~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~K~~ 621 (637)
+...+|-|+-|+|||||.+++.+... ....++++++ .|+......- + .....+++.|+-
T Consensus 90 ---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~-~--~~~~~l~~~~~~ 161 (170)
T 3i9f_A 90 ---DKQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNP-T--PYHFGLVLKRKT 161 (170)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECS-S--TTEEEEEEEECC
T ss_pred ---CHHHHHHHHHHhcCCCCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCC-C--CceEEEEEecCC
Confidence 56899999999999999999985211 2356666666 6655433221 1 246778887753
No 211
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.73 E-value=8.2e-09 Score=102.55 Aligned_cols=97 Identities=11% Similarity=0.191 Sum_probs=75.5
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcccchhh-ccccccCCCC-CccceeeeccccccCCC
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQ-NWCEAMSTYP-RTYDLIHADSIFSLYKD 555 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~-~wce~~~~yp-~t~Dl~H~~~lfs~~~~ 555 (637)
..+|||+|||.|.++.+|.+.+. +|+.+|.++.++..+.++ +..+. |..+-..++| .+||+|.+.++|....
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~- 115 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEEGI---ESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLD- 115 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHHTC---CEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSC-
T ss_pred CCeEEEEeCCCCHHHHHHHhCCC---cEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhhCC-
Confidence 57899999999999999988754 456778777899998888 33332 2222233566 8999999988887654
Q ss_pred CcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 556 RCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 556 ~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
.-++..+|-++.|+|||||++++..
T Consensus 116 ~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 116 PERLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp GGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred cHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 2356899999999999999999974
No 212
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.72 E-value=5.6e-08 Score=95.70 Aligned_cols=98 Identities=17% Similarity=0.188 Sum_probs=73.4
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhc----c-cchhh-ccccccCCCCCccceeeecc-c
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG----L-IGTYQ-NWCEAMSTYPRTYDLIHADS-I 549 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg----l-~~~~~-~wce~~~~yp~t~Dl~H~~~-l 549 (637)
...+|||+|||.|.++..|++.+. +|+.+|.++.++..+.++- + +..++ |.. .+ +++.+||+|.+.+ +
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~---~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~-~~~~~fD~v~~~~~~ 111 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK---NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDIS-NL-NINRKFDLITCCLDS 111 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS---EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGG-GC-CCSCCEEEEEECTTG
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC---cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccc-cC-CccCCceEEEEcCcc
Confidence 356899999999999999988854 5777788778888887762 2 22222 221 11 2458999999987 8
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEE
Q 006633 550 FSLYKDRCEMEDVLLEMDRILRPEGSVIIR 579 (637)
Q Consensus 550 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~ 579 (637)
|....+.-+...+|-++-|+|+|||.+++.
T Consensus 112 l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 112 TNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp GGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 876644446789999999999999999984
No 213
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.72 E-value=3.2e-08 Score=102.89 Aligned_cols=103 Identities=14% Similarity=0.154 Sum_probs=68.4
Q ss_pred CCCEEEEECCCCchHHHHHhhc----CCEEEEcCccccHHHHHHHHHH-----cCCCeEEEEeccccC-CCCCCCeeEEE
Q 006633 218 SIRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFALE-----RGVPALIGVMASIRL-PYPSRAFDMAH 287 (637)
Q Consensus 218 ~~r~VLDIGCGtG~~a~~La~~----~v~~vdisp~Dls~a~i~~A~e-----rg~~~~~~~~d~~~L-pfpd~sFDlV~ 287 (637)
..++|||||||+|.++..++++ .++++|+++..+..+...+... ....+.+..+|.... +..+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 3569999999999999999987 2566777665444433332221 123577777776543 44578899999
Q ss_pred eccccccCCcC---CHHHHHHHHHhcccCCeEEEEEe
Q 006633 288 CSRCLIPWGQY---ADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 288 ~s~~L~h~~~~---d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+.... ++... ....+++++.++|||||.|++..
T Consensus 163 ~D~~~-p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 163 SDCTD-PIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp ECC-----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred ECCCC-ccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 95433 43321 11679999999999999999975
No 214
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.71 E-value=1.7e-08 Score=103.97 Aligned_cols=117 Identities=11% Similarity=0.018 Sum_probs=74.1
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCC--chHHHHHhhc---CCEEEEcCccccHHHHHHHHHHcC-----CCeEEEEe
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGV--ASWGAYLMSR---NILAVSFAPRDTHEAQVQFALERG-----VPALIGVM 271 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGt--G~~a~~La~~---~v~~vdisp~Dls~a~i~~A~erg-----~~~~~~~~ 271 (637)
+.+..+..+++.... ..++|||||||+ +.++..++++ +..++.+ |.++.++..|+++. ..+.+..+
T Consensus 63 r~fl~rav~~l~~~~-g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~V---D~sp~mLa~Ar~~l~~~~~~~~~~v~a 138 (277)
T 3giw_A 63 RDWMNRAVAHLAKEA-GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYV---DNDPIVLTLSQGLLASTPEGRTAYVEA 138 (277)
T ss_dssp HHHHHHHHHHHHHTS-CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEE---ECCHHHHHTTHHHHCCCSSSEEEEEEC
T ss_pred HHHHHHHHHHhcccc-CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEE---eCChHHHHHHHHHhccCCCCcEEEEEe
Confidence 344455555554222 246899999997 3344554442 3344444 44555665555432 13788888
Q ss_pred ccccCC----CC--CCCee-----EEEeccccccCCcCC-HHHHHHHHHhcccCCeEEEEEeC
Q 006633 272 ASIRLP----YP--SRAFD-----MAHCSRCLIPWGQYA-DGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 272 d~~~Lp----fp--d~sFD-----lV~~s~~L~h~~~~d-~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
|...++ .+ .+.|| .|+++.+|||+.+++ +..++.++.+.|+|||+|+++..
T Consensus 139 D~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~ 201 (277)
T 3giw_A 139 DMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIG 201 (277)
T ss_dssp CTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEE
T ss_pred cccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEec
Confidence 877642 11 34565 588888886666422 57899999999999999999864
No 215
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.71 E-value=1e-07 Score=102.14 Aligned_cols=132 Identities=16% Similarity=0.077 Sum_probs=84.4
Q ss_pred HHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC----CEEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccC
Q 006633 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN----ILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRL 276 (637)
Q Consensus 203 ~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~----v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~L 276 (637)
.....+..+. ..+ +.+|||+|||+|.++..++..+ ++++|+++.++..+..+ +...++ .+.+...|...+
T Consensus 205 ~la~~l~~~~-~~~--~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n-~~~~gl~~~i~~~~~D~~~~ 280 (373)
T 3tm4_A 205 SIANAMIELA-ELD--GGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMN-ALAAGVLDKIKFIQGDATQL 280 (373)
T ss_dssp HHHHHHHHHH-TCC--SCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHH-HHHTTCGGGCEEEECCGGGG
T ss_pred HHHHHHHHhh-cCC--CCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHH-HHHcCCCCceEEEECChhhC
Confidence 3444455555 333 3489999999999999998873 56666655444433322 223354 678999999999
Q ss_pred CCCCCCeeEEEeccccccCCcC--C----HHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHH
Q 006633 277 PYPSRAFDMAHCSRCLIPWGQY--A----DGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETI 350 (637)
Q Consensus 277 pfpd~sFDlV~~s~~L~h~~~~--d----~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~l 350 (637)
++++++||+|+++..+...... . ...++.++.|+| ||.+++..+ . .+.+++.
T Consensus 281 ~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~-------------~-------~~~~~~~ 338 (373)
T 3tm4_A 281 SQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT-------------E-------KKAIEEA 338 (373)
T ss_dssp GGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES-------------C-------HHHHHHH
T ss_pred CcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC-------------C-------HHHHHHH
Confidence 9888999999998654322110 1 256888999999 455555433 1 1234556
Q ss_pred HHHhceeeec
Q 006633 351 ARSLCWKKLI 360 (637)
Q Consensus 351 a~~l~w~~v~ 360 (637)
..+.+|+...
T Consensus 339 ~~~~G~~~~~ 348 (373)
T 3tm4_A 339 IAENGFEIIH 348 (373)
T ss_dssp HHHTTEEEEE
T ss_pred HHHcCCEEEE
Confidence 7777887654
No 216
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.71 E-value=1.8e-08 Score=104.20 Aligned_cols=137 Identities=12% Similarity=0.068 Sum_probs=95.9
Q ss_pred ceeEeeecccchhhhhhhc--CCCeEEEEeccCCCCcchhHHHHhhc----c---cchhh-ccccccCCCCCccceeeec
Q 006633 478 YRNLLDMNAYLGGFAAALV--DDPLWVMNTVPVEAKINTLGVIYERG----L---IGTYQ-NWCEAMSTYPRTYDLIHAD 547 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~--~~~v~~mnv~~~~~~~~~l~~~~eRg----l---~~~~~-~wce~~~~yp~t~Dl~H~~ 547 (637)
..+|||+|||.|.++.+|+ ..+- .+|+.+|.++.++..+.++. + +-+++ |..+ .+++.+||+|.++
T Consensus 119 ~~~vLDiGcG~G~~~~~la~~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~~~~~~fD~v~~~ 194 (305)
T 3ocj_A 119 GCVVASVPCGWMSELLALDYSACPG--VQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK--LDTREGYDLLTSN 194 (305)
T ss_dssp TCEEEETTCTTCHHHHTSCCTTCTT--CEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG--CCCCSCEEEEECC
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCC--CeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc--CCccCCeEEEEEC
Confidence 5689999999999999995 3322 35667777778888877653 2 22222 2222 1245999999998
Q ss_pred cccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH---------------------------------------HHHHHH
Q 006633 548 SIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV---------------------------------------DILVKI 588 (637)
Q Consensus 548 ~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~---------------------------------------~~~~~~ 588 (637)
+++....+.-....+|-|+-|+|||||.+++.+-. .....+
T Consensus 195 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (305)
T 3ocj_A 195 GLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQT 274 (305)
T ss_dssp SSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHH
T ss_pred ChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHH
Confidence 88876655544456899999999999999998611 135677
Q ss_pred HHHHhcCCceeEEeccCCCCCCcceEEEEEec
Q 006633 589 KSITDGMEWEGRIADHENGPRQREKILFANKK 620 (637)
Q Consensus 589 ~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~K~ 620 (637)
.++++.-.++....... ....-.+++++|+
T Consensus 275 ~~~l~~aGF~~v~~~~~--~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 275 RAQLEEAGFTDLRFEDD--RARLFPTVIARKP 304 (305)
T ss_dssp HHHHHHTTCEEEEEECC--TTSSSCEEEEECC
T ss_pred HHHHHHCCCEEEEEEcc--cCceeeEEEEecC
Confidence 88888888887655432 2234568888885
No 217
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.70 E-value=5.2e-08 Score=93.15 Aligned_cols=92 Identities=16% Similarity=0.126 Sum_probs=63.2
Q ss_pred CCEEEEECCCCchHHHHHhhc-C------------CEEEEcCccccHHHHHHHHHHcCCCeEEE-EeccccCC-------
Q 006633 219 IRTAIDTGCGVASWGAYLMSR-N------------ILAVSFAPRDTHEAQVQFALERGVPALIG-VMASIRLP------- 277 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~-~------------v~~vdisp~Dls~a~i~~A~erg~~~~~~-~~d~~~Lp------- 277 (637)
+.+|||+|||+|.++..|+++ + ++++|+++.. ....+.+. ..|....+
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~~~~ 91 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQRILE 91 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHHHHH
Confidence 349999999999999999876 2 4555554421 11235666 66654432
Q ss_pred -CCCCCeeEEEeccccc---cCCcCCH-------HHHHHHHHhcccCCeEEEEEeC
Q 006633 278 -YPSRAFDMAHCSRCLI---PWGQYAD-------GLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 278 -fpd~sFDlV~~s~~L~---h~~~~d~-------~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+++++||+|+|..+++ ++.. +. ..++.++.++|||||.|++...
T Consensus 92 ~~~~~~fD~V~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 146 (196)
T 2nyu_A 92 VLPGRRADVILSDMAPNATGFRDL-DHDRLISLCLTLLSVTPDILQPGGTFLCKTW 146 (196)
T ss_dssp HSGGGCEEEEEECCCCCCCSCHHH-HHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hcCCCCCcEEEeCCCCCCCCCccc-CHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence 3456899999976542 1211 22 4789999999999999999864
No 218
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.70 E-value=1.3e-07 Score=97.69 Aligned_cols=116 Identities=16% Similarity=0.160 Sum_probs=76.1
Q ss_pred cHHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc-CCEEEEcCccccHHHHHHHHHH----cCCC--eEEEEec
Q 006633 200 GADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALE----RGVP--ALIGVMA 272 (637)
Q Consensus 200 g~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-~v~~vdisp~Dls~a~i~~A~e----rg~~--~~~~~~d 272 (637)
..+.+++.+.+.++...+ .+|||+|||+|.++..|++. +..++.+ |+++.+++.|++ .+.. +.+...|
T Consensus 107 ~te~lv~~~l~~~~~~~~--~~vLDlG~GsG~~~~~la~~~~~~v~~v---Dis~~al~~A~~n~~~~~l~~~v~~~~~D 181 (284)
T 1nv8_A 107 ETEELVELALELIRKYGI--KTVADIGTGSGAIGVSVAKFSDAIVFAT---DVSSKAVEIARKNAERHGVSDRFFVRKGE 181 (284)
T ss_dssp THHHHHHHHHHHHHHHTC--CEEEEESCTTSHHHHHHHHHSSCEEEEE---ESCHHHHHHHHHHHHHTTCTTSEEEEESS
T ss_pred hHHHHHHHHHHHhcccCC--CEEEEEeCchhHHHHHHHHCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCceEEEECc
Confidence 345566666666654333 38999999999999999887 4444433 444455554443 3442 7888888
Q ss_pred cccCCCCCCCe---eEEEecccccc-----------CCc------CCHHHHHHHHH-hcccCCeEEEEEeC
Q 006633 273 SIRLPYPSRAF---DMAHCSRCLIP-----------WGQ------YADGLYLIEVD-RVLRPGGYWILSGP 322 (637)
Q Consensus 273 ~~~Lpfpd~sF---DlV~~s~~L~h-----------~~~------~d~~~~L~ei~-RvLKPGG~Lvls~p 322 (637)
... +++ ++| |+|+++.-++. .+. .+...+++++. +.|+|||.|++..+
T Consensus 182 ~~~-~~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 182 FLE-PFK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp TTG-GGG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECC
T ss_pred chh-hcc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEEC
Confidence 655 222 478 99999743221 110 02236899999 99999999999754
No 219
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.70 E-value=8.7e-09 Score=102.52 Aligned_cols=129 Identities=16% Similarity=0.122 Sum_probs=89.9
Q ss_pred hhhccCCCCCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhc----ccchhh-ccccccCCCC-Ccc
Q 006633 468 VDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG----LIGTYQ-NWCEAMSTYP-RTY 541 (637)
Q Consensus 468 ~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg----l~~~~~-~wce~~~~yp-~t~ 541 (637)
++..+.. ....+|||+|||.|.++.+|++.. ..+|..+|.++.++..+.++- -+-.++ |+. .+ ++| .+|
T Consensus 85 ~l~~l~~-~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~-~~-~~~~~~f 159 (254)
T 1xtp_A 85 FIASLPG-HGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGMPVGKFILASME-TA-TLPPNTY 159 (254)
T ss_dssp HHHTSTT-CCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGG-GC-CCCSSCE
T ss_pred HHHhhcc-cCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHH-HC-CCCCCCe
Confidence 3333433 457799999999999999998764 234666677778888888773 233332 322 23 344 899
Q ss_pred ceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH----------------HHHHHHHHHHhcCCceeEEe
Q 006633 542 DLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV----------------DILVKIKSITDGMEWEGRIA 602 (637)
Q Consensus 542 Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~----------------~~~~~~~~~~~~~~W~~~~~ 602 (637)
|+|.+..++..... -+...+|.++.|+|||||+++|.+.. .....++++++...++....
T Consensus 160 D~v~~~~~l~~~~~-~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 235 (254)
T 1xtp_A 160 DLIVIQWTAIYLTD-ADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKE 235 (254)
T ss_dssp EEEEEESCGGGSCH-HHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEE
T ss_pred EEEEEcchhhhCCH-HHHHHHHHHHHHhcCCCeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEe
Confidence 99999888775532 24679999999999999999998731 02366777777777776544
No 220
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.70 E-value=1.2e-07 Score=100.22 Aligned_cols=97 Identities=14% Similarity=0.167 Sum_probs=69.4
Q ss_pred CCEEEEECCCCchHHHHHhhc----CCEEEEcCccccHHHHHHHHHHc---------CCCeEEEEeccccC--CCCCCCe
Q 006633 219 IRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFALER---------GVPALIGVMASIRL--PYPSRAF 283 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~----~v~~vdisp~Dls~a~i~~A~er---------g~~~~~~~~d~~~L--pfpd~sF 283 (637)
.++|||||||+|.++..|+++ .++++|+ ++.+++.|+++ ...+.+..+|.... .+++++|
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDi-----s~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~f 195 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHASIEQIDMCEI-----DKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSY 195 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCTTCCEEEEEES-----CHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCE
T ss_pred CCEEEEECCCccHHHHHHHHcCCCCEEEEEEC-----CHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCc
Confidence 469999999999999999987 2455555 44555555432 23578888886553 2456789
Q ss_pred eEEEeccccccCCcCC---HHHHHHHHHhcccCCeEEEEEe
Q 006633 284 DMAHCSRCLIPWGQYA---DGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 284 DlV~~s~~L~h~~~~d---~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
|+|++.... ++...+ ...+++++.++|||||.|++..
T Consensus 196 DlIi~d~~~-p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 196 DAVIVDSSD-PIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEEEECCCC-TTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred cEEEECCCC-ccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 999996532 332111 4689999999999999999974
No 221
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.70 E-value=1e-08 Score=100.96 Aligned_cols=95 Identities=21% Similarity=0.279 Sum_probs=72.6
Q ss_pred eeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc--cchhhccccccCCCCCccceeeeccccccCCCC
Q 006633 479 RNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL--IGTYQNWCEAMSTYPRTYDLIHADSIFSLYKDR 556 (637)
Q Consensus 479 r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl--~~~~~~wce~~~~yp~t~Dl~H~~~lfs~~~~~ 556 (637)
.+|||+|||.|.++..|++... +|+.+|.++.++..+.++-- +..++.-.+.+ ..+.+||+|++.+++....
T Consensus 44 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~-- 117 (250)
T 2p7i_A 44 GNLLELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGRLKDGITYIHSRFEDA-QLPRRYDNIVLTHVLEHID-- 117 (250)
T ss_dssp SCEEEESCTTSHHHHHHTTTCS---CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGC-CCSSCEEEEEEESCGGGCS--
T ss_pred CcEEEECCCCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHc-CcCCcccEEEEhhHHHhhc--
Confidence 4699999999999999988753 56777887788888888732 22222111222 2348999999988887654
Q ss_pred cCHHHHHHHHh-hcccCCcEEEEEe
Q 006633 557 CEMEDVLLEMD-RILRPEGSVIIRD 580 (637)
Q Consensus 557 c~~~~~l~e~d-RiLrPgG~~i~~d 580 (637)
+.+.+|-|+- |+|||||++++.+
T Consensus 118 -~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 118 -DPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp -SHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred -CHHHHHHHHHHHhcCCCCEEEEEc
Confidence 4589999999 9999999999986
No 222
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.69 E-value=9.8e-09 Score=105.88 Aligned_cols=95 Identities=18% Similarity=0.145 Sum_probs=67.5
Q ss_pred CCEEEEECCCCchHHHHHhhc-CCEEEEcCccccHHHHHHHHHHcC-------CCeEEE--EeccccCCCCCCCeeEEEe
Q 006633 219 IRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALERG-------VPALIG--VMASIRLPYPSRAFDMAHC 288 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~-~v~~vdisp~Dls~a~i~~A~erg-------~~~~~~--~~d~~~Lpfpd~sFDlV~~ 288 (637)
+.+|||+|||+|.++..++++ .|+++|+++ +.. .+.++. .++.+. .+|+..+| +++||+|+|
T Consensus 83 g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~-m~~-----~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvs 154 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQPNVREVKAYT-LGT-----SGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLC 154 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTSTTEEEEEEEC-CCC-----TTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEE
T ss_pred CCEEEEeccCCCHHHHHHHHcCCEEEEECch-hhh-----hhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEE
Confidence 459999999999999999987 678888876 321 111111 146777 77877765 689999999
Q ss_pred ccccccCCcC--CHH---HHHHHHHhcccCCe--EEEEEeC
Q 006633 289 SRCLIPWGQY--ADG---LYLIEVDRVLRPGG--YWILSGP 322 (637)
Q Consensus 289 s~~L~h~~~~--d~~---~~L~ei~RvLKPGG--~Lvls~p 322 (637)
..+ .+.... +.. .+|.++.|+||||| .|++...
T Consensus 155 d~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~ 194 (276)
T 2wa2_A 155 DIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVL 194 (276)
T ss_dssp CCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEES
T ss_pred CCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeC
Confidence 866 222110 111 37899999999999 9998754
No 223
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.68 E-value=1e-07 Score=94.85 Aligned_cols=93 Identities=15% Similarity=0.172 Sum_probs=66.3
Q ss_pred CEEEEECCCCchHHHHHhhc---C--CEEEEcCccccHHHHHHHHHHc----CC--CeEEEEeccc----cCCCCC--CC
Q 006633 220 RTAIDTGCGVASWGAYLMSR---N--ILAVSFAPRDTHEAQVQFALER----GV--PALIGVMASI----RLPYPS--RA 282 (637)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~---~--v~~vdisp~Dls~a~i~~A~er----g~--~~~~~~~d~~----~Lpfpd--~s 282 (637)
.+|||||||+|..+..|++. + ++++|+ ++.+++.|+++ +. .+.+...+.. .++..+ ++
T Consensus 74 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~-----~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 74 KQVLEIGVFRGYSALAMALQLPPDGQIIACDQ-----DPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEES-----CHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred CEEEEecCCCCHHHHHHHHhCCCCCEEEEEEC-----CHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 38999999999999999875 3 445555 44444444432 33 3677777753 233334 78
Q ss_pred eeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 283 FDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 283 FDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
||+|++... .. +...+++++.++|||||.+++...
T Consensus 149 fD~V~~d~~----~~-~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 149 FDLIFIDAD----KR-NYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EEEEEECSC----GG-GHHHHHHHHHHTEEEEEEEEEECT
T ss_pred cCEEEECCC----HH-HHHHHHHHHHHHcCCCeEEEEeCC
Confidence 999998643 22 677899999999999999999753
No 224
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.68 E-value=4.5e-08 Score=103.46 Aligned_cols=113 Identities=9% Similarity=0.021 Sum_probs=75.2
Q ss_pred HHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc----CC---CeEEEEeccccCC
Q 006633 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----GV---PALIGVMASIRLP 277 (637)
Q Consensus 205 i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er----g~---~~~~~~~d~~~Lp 277 (637)
.+.+.+.+.. .+.+.+|||+|||+|.++..+++.+..++.+ |+++.+++.|+++ +. .+.+...|...+.
T Consensus 141 ~~~l~~~~~~-~~~~~~VLDlgcGtG~~sl~la~~ga~V~~V---D~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l 216 (332)
T 2igt_A 141 WEWLKNAVET-ADRPLKVLNLFGYTGVASLVAAAAGAEVTHV---DASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFI 216 (332)
T ss_dssp HHHHHHHHHH-SSSCCEEEEETCTTCHHHHHHHHTTCEEEEE---CSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHH
T ss_pred HHHHHHHHHh-cCCCCcEEEcccccCHHHHHHHHcCCEEEEE---ECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHH
Confidence 3445555531 1223489999999999999999886555554 5555555555432 33 2788888865543
Q ss_pred C----CCCCeeEEEeccccc---------cCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 278 Y----PSRAFDMAHCSRCLI---------PWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 278 f----pd~sFDlV~~s~~L~---------h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
. .+++||+|++..-.. ++.. +...++.++.++|||||.|++...
T Consensus 217 ~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~-~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 217 QREERRGSTYDIILTDPPKFGRGTHGEVWQLFD-HLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp HHHHHHTCCBSEEEECCCSEEECTTCCEEEHHH-HHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred HHHHhcCCCceEEEECCccccCCchHHHHHHHH-HHHHHHHHHHHhcCcCcEEEEEEC
Confidence 1 156899999954311 1222 467899999999999999888753
No 225
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.68 E-value=1.3e-08 Score=104.23 Aligned_cols=95 Identities=17% Similarity=0.185 Sum_probs=67.0
Q ss_pred CCEEEEECCCCchHHHHHhhc-CCEEEEcCccccHHHHHHHHHHc-------CCCeEEE--EeccccCCCCCCCeeEEEe
Q 006633 219 IRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALER-------GVPALIG--VMASIRLPYPSRAFDMAHC 288 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~-~v~~vdisp~Dls~a~i~~A~er-------g~~~~~~--~~d~~~Lpfpd~sFDlV~~ 288 (637)
+.+|||+|||+|.++..++++ .|+++|+++ +.. .+.+. +.++.+. .+|+..++ +++||+|+|
T Consensus 75 g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~-m~~-----~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~s 146 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASRPHVMDVRAYT-LGV-----GGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMC 146 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTTEEEEEEEC-CCC-----SSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEE
T ss_pred CCEEEEeCcCCCHHHHHHHHcCcEEEEECch-hhh-----hhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEE
Confidence 449999999999999999886 678888876 321 11111 1146777 77877765 689999999
Q ss_pred ccccccCCcC--CHH---HHHHHHHhcccCCe--EEEEEeC
Q 006633 289 SRCLIPWGQY--ADG---LYLIEVDRVLRPGG--YWILSGP 322 (637)
Q Consensus 289 s~~L~h~~~~--d~~---~~L~ei~RvLKPGG--~Lvls~p 322 (637)
..+ ++.... +.. .+|.++.++||||| .|++...
T Consensus 147 d~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 147 DVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp CCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred eCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 766 222210 111 37899999999999 9999754
No 226
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.67 E-value=3.4e-08 Score=95.36 Aligned_cols=94 Identities=17% Similarity=0.243 Sum_probs=72.3
Q ss_pred eEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCCC-Cccceeeecccc
Q 006633 480 NLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-RTYDLIHADSIF 550 (637)
Q Consensus 480 ~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~yp-~t~Dl~H~~~lf 550 (637)
+|||+|||.|.++.+|++.+ -.+|+.+|.++.++..+.++ |+ +..++ |. +.++ +| .+||+|.+.+++
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~-~~~~~~D~v~~~~~l 121 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQS--DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDV-HNIP-IEDNYADLIVSRGSV 121 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHS--EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBT-TBCS-SCTTCEEEEEEESCG
T ss_pred EEEEECCCCCHHHHHHHHcC--CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCH-HHCC-CCcccccEEEECchH
Confidence 99999999999999998873 24677778777888888777 44 22222 22 2222 44 899999998887
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 551 SLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 551 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
... -+...+|-|+-|+|||||.+++.+
T Consensus 122 ~~~---~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 122 FFW---EDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp GGC---SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhc---cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 765 356899999999999999999975
No 227
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.67 E-value=1.4e-07 Score=94.04 Aligned_cols=161 Identities=12% Similarity=0.071 Sum_probs=101.6
Q ss_pred hhHHHHHHHHHHHHHhhhccCCCCCceeEeeecccchhhhhhhc--CCCeEEEEeccCCCCcchhHHHHhh----cc--c
Q 006633 453 EDTALWKKRVTYYKSVDYQLAQPGRYRNLLDMNAYLGGFAAALV--DDPLWVMNTVPVEAKINTLGVIYER----GL--I 524 (637)
Q Consensus 453 ~d~~~w~~~v~~y~~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~--~~~v~~mnv~~~~~~~~~l~~~~eR----gl--~ 524 (637)
.....|.+++-....++..+.. ....+|||+|||.|.++..|+ ..+. .|+.+|.++.++.++.++ |+ +
T Consensus 47 ~~~~~~~~~~~d~l~~~~~~~~-~~~~~vLDiG~G~G~~~~~la~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v 122 (240)
T 1xdz_A 47 EKKEVYLKHFYDSITAAFYVDF-NQVNTICDVGAGAGFPSLPIKICFPHL---HVTIVDSLNKRITFLEKLSEALQLENT 122 (240)
T ss_dssp SHHHHHHHTHHHHHGGGGTSCG-GGCCEEEEECSSSCTTHHHHHHHCTTC---EEEEEESCHHHHHHHHHHHHHHTCSSE
T ss_pred CHHHHHHHHHHHHHhHHHhccc-CCCCEEEEecCCCCHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHcCCCCE
Confidence 3445666655443333322221 235689999999999988887 3332 466667776777777653 54 3
Q ss_pred chhhccccccCC---CCCccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC---HHHHHHHHHHHhcCCce
Q 006633 525 GTYQNWCEAMST---YPRTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD---VDILVKIKSITDGMEWE 598 (637)
Q Consensus 525 ~~~~~wce~~~~---yp~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~---~~~~~~~~~~~~~~~W~ 598 (637)
-+++.=.+.+.. .+.+||+|.+..+ .+++.++-++-|+|||||.+++.+. .+.+..+.+.++...+.
T Consensus 123 ~~~~~d~~~~~~~~~~~~~fD~V~~~~~-------~~~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~~l~~~g~~ 195 (240)
T 1xdz_A 123 TFCHDRAETFGQRKDVRESYDIVTARAV-------ARLSVLSELCLPLVKKNGLFVALKAASAEEELNAGKKAITTLGGE 195 (240)
T ss_dssp EEEESCHHHHTTCTTTTTCEEEEEEECC-------SCHHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHHHHHHTTEE
T ss_pred EEEeccHHHhcccccccCCccEEEEecc-------CCHHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHHHHHHcCCe
Confidence 344321223332 2578999998653 4578999999999999999999753 44566677777788887
Q ss_pred eEEecc--CCCCCCcceEEEEEecCCCC
Q 006633 599 GRIADH--ENGPRQREKILFANKKYWTA 624 (637)
Q Consensus 599 ~~~~~~--e~~~~~~~~~l~~~K~~w~~ 624 (637)
...... -......-.+++.+|.=.++
T Consensus 196 ~~~~~~~~~~~~~~~~~l~~~~k~~~~~ 223 (240)
T 1xdz_A 196 LENIHSFKLPIEESDRNIMVIRKIKNTP 223 (240)
T ss_dssp EEEEEEEECTTTCCEEEEEEEEECSCCC
T ss_pred EeEEEEEecCCCCCceEEEEEEecCCCC
Confidence 653221 11112345677778765444
No 228
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.67 E-value=1.4e-08 Score=109.53 Aligned_cols=144 Identities=11% Similarity=0.158 Sum_probs=105.6
Q ss_pred chhhHHHHHHHHHHHHH-hhhccCCCCCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcccchhhc
Q 006633 451 FREDTALWKKRVTYYKS-VDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQN 529 (637)
Q Consensus 451 f~~d~~~w~~~v~~y~~-~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~~ 529 (637)
+......|.+....+.. ++..+.. ....+|||+|||.|.++.+|.+.+. +|+.+|.+.+++..+.++|+-.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~VLDiGcG~G~~~~~l~~~g~---~v~gvD~s~~~~~~a~~~~~~~~~~~ 156 (416)
T 4e2x_A 81 HSSGSSVMREHFAMLARDFLATELT-GPDPFIVEIGCNDGIMLRTIQEAGV---RHLGFEPSSGVAAKAREKGIRVRTDF 156 (416)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHTTTC-SSSCEEEEETCTTTTTHHHHHHTTC---EEEEECCCHHHHHHHHTTTCCEECSC
T ss_pred cCcCCHHHHHHHHHHHHHHHHHhCC-CCCCEEEEecCCCCHHHHHHHHcCC---cEEEECCCHHHHHHHHHcCCCcceee
Confidence 44556678877776554 3343443 4567999999999999999998866 77788888899999999987332211
Q ss_pred c----ccccCCCC-CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH----------H----------H
Q 006633 530 W----CEAMSTYP-RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV----------D----------I 584 (637)
Q Consensus 530 w----ce~~~~yp-~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~----------~----------~ 584 (637)
+ .+.+ +++ .+||+|.+.++|.... +...+|-|+-|+|||||.+++.... + .
T Consensus 157 ~~~~~~~~l-~~~~~~fD~I~~~~vl~h~~---d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s 232 (416)
T 4e2x_A 157 FEKATADDV-RRTEGPANVIYAANTLCHIP---YVQSVLEGVDALLAPDGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFS 232 (416)
T ss_dssp CSHHHHHHH-HHHHCCEEEEEEESCGGGCT---THHHHHHHHHHHEEEEEEEEEEEECHHHHHHHTCGGGCSTTCCEECC
T ss_pred echhhHhhc-ccCCCCEEEEEECChHHhcC---CHHHHHHHHHHHcCCCeEEEEEeCChHHhhhhcchhhhhhhhhhcCC
Confidence 1 1122 243 8999999999988765 6799999999999999999997431 0 2
Q ss_pred HHHHHHHHhcCCceeEEe
Q 006633 585 LVKIKSITDGMEWEGRIA 602 (637)
Q Consensus 585 ~~~~~~~~~~~~W~~~~~ 602 (637)
...++++++.-.++....
T Consensus 233 ~~~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 233 ATSVQGMAQRCGFELVDV 250 (416)
T ss_dssp HHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHcCCEEEEE
Confidence 256778888877776543
No 229
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.67 E-value=3.3e-08 Score=102.42 Aligned_cols=101 Identities=14% Similarity=0.145 Sum_probs=76.0
Q ss_pred CCceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----cccchhhccccccCCCCCccceeeecccc
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMSTYPRTYDLIHADSIF 550 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl~~~~~~wce~~~~yp~t~Dl~H~~~lf 550 (637)
....+|||+|||.|.++..|++. +. +|+.+|.++.++..+.++ |+-..+.-.+..+..+|.+||+|.+.++|
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l 165 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFDV---NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAF 165 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCG
T ss_pred CCcCEEEEEcccchHHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChH
Confidence 34668999999999999999876 54 667777777888888876 44221221223344557999999998887
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 551 SLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 551 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
..... -+...+|-|+-|+|||||.+++.+
T Consensus 166 ~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 166 EHFGH-ENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp GGTCG-GGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred HhcCH-HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 75432 356899999999999999999975
No 230
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.66 E-value=1.2e-08 Score=104.00 Aligned_cols=94 Identities=14% Similarity=0.109 Sum_probs=71.4
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcccchhhccccccCCCC-CccceeeeccccccCCCC
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMSTYP-RTYDLIHADSIFSLYKDR 556 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~~wce~~~~yp-~t~Dl~H~~~lfs~~~~~ 556 (637)
-.+|||+|||+|.++..|+++.- +|+.+|.++.++..+.++.-+...+.=.|.++ +| .+||+|.|..+|. -
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~~~---~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~-~~~~sfD~v~~~~~~h----~ 111 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEFFE---RVHAVDPGEAQIRQALRHPRVTYAVAPAEDTG-LPPASVDVAIAAQAMH----W 111 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTTCS---EEEEEESCHHHHHTCCCCTTEEEEECCTTCCC-CCSSCEEEEEECSCCT----T
T ss_pred CCCEEEEcCCCCHHHHHHHHhCC---EEEEEeCcHHhhhhhhhcCCceeehhhhhhhc-ccCCcccEEEEeeehh----H
Confidence 35799999999999999998853 66777888788887766543443332224443 54 8999999977773 2
Q ss_pred cCHHHHHHHHhhcccCCcEEEEE
Q 006633 557 CEMEDVLLEMDRILRPEGSVIIR 579 (637)
Q Consensus 557 c~~~~~l~e~dRiLrPgG~~i~~ 579 (637)
.+.+..|.|+.|||||||.+++-
T Consensus 112 ~~~~~~~~e~~rvLkpgG~l~~~ 134 (257)
T 4hg2_A 112 FDLDRFWAELRRVARPGAVFAAV 134 (257)
T ss_dssp CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred hhHHHHHHHHHHHcCCCCEEEEE
Confidence 46789999999999999999875
No 231
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.66 E-value=1.3e-07 Score=101.65 Aligned_cols=114 Identities=16% Similarity=0.122 Sum_probs=77.8
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRL 276 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~L 276 (637)
+.|.+.|.+-.....+ ++|||||||+|.++...++.| |++++.++ +...+.+.+..++. .+.+...+...+
T Consensus 69 ~aY~~Ai~~~~~~~~~--k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~--~~~~a~~~~~~n~~~~~i~~i~~~~~~~ 144 (376)
T 4hc4_A 69 DAYRLGILRNWAALRG--KTVLDVGAGTGILSIFCAQAGARRVYAVEASA--IWQQAREVVRFNGLEDRVHVLPGPVETV 144 (376)
T ss_dssp HHHHHHHHTTHHHHTT--CEEEEETCTTSHHHHHHHHTTCSEEEEEECST--THHHHHHHHHHTTCTTTEEEEESCTTTC
T ss_pred HHHHHHHHhCHHhcCC--CEEEEeCCCccHHHHHHHHhCCCEEEEEeChH--HHHHHHHHHHHcCCCceEEEEeeeeeee
Confidence 4444445432222233 489999999999998888874 67777764 33334445555654 478888888888
Q ss_pred CCCCCCeeEEEeccccccCCcC-CHHHHHHHHHhcccCCeEEEEE
Q 006633 277 PYPSRAFDMAHCSRCLIPWGQY-ADGLYLIEVDRVLRPGGYWILS 320 (637)
Q Consensus 277 pfpd~sFDlV~~s~~L~h~~~~-d~~~~L~ei~RvLKPGG~Lvls 320 (637)
.++ ..||+|+|...-..+..+ ....++....|+|||||.++-.
T Consensus 145 ~lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 145 ELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp CCS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred cCC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCc
Confidence 777 679999984332222211 6788899999999999998754
No 232
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.65 E-value=1.7e-08 Score=97.68 Aligned_cols=100 Identities=14% Similarity=0.142 Sum_probs=74.0
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcccchhhccccccCCCC-CccceeeeccccccCCCC
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMSTYP-RTYDLIHADSIFSLYKDR 556 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~~wce~~~~yp-~t~Dl~H~~~lfs~~~~~ 556 (637)
..+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++|+..+-..-+.....+| .+||+|.+.+++....+
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~- 122 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGLAD---RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAVFFAHWLAHVPD- 122 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHHSS---EEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEEEEESCGGGSCH-
T ss_pred CCeEEEECCCCCHHHHHHHhcCC---eEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEEEEechhhcCCH-
Confidence 45999999999999999988744 56677777789999998775221111111222244 89999999887776543
Q ss_pred cCHHHHHHHHhhcccCCcEEEEEeC
Q 006633 557 CEMEDVLLEMDRILRPEGSVIIRDD 581 (637)
Q Consensus 557 c~~~~~l~e~dRiLrPgG~~i~~d~ 581 (637)
-.+..+|-++-|+|||||.+++.+.
T Consensus 123 ~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 123 DRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 2357899999999999999999853
No 233
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.65 E-value=1.2e-07 Score=93.16 Aligned_cols=97 Identities=13% Similarity=0.153 Sum_probs=67.2
Q ss_pred CEEEEECCCCchHHHHHhhc-----CCEEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccC-C-CCC----CCeeEE
Q 006633 220 RTAIDTGCGVASWGAYLMSR-----NILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRL-P-YPS----RAFDMA 286 (637)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~-----~v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~L-p-fpd----~sFDlV 286 (637)
.+|||||||+|.++..|++. .++++|+++..+..+...+ ...+. .+.+...+.... + +++ ++||+|
T Consensus 71 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~-~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 71 KKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLW-RQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHH-HHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 49999999999999999875 3566666554433333222 22343 577877775432 1 211 689999
Q ss_pred EeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 287 HCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 287 ~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++... .. +...+++++.++|||||.+++...
T Consensus 150 ~~d~~----~~-~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 150 VVDAD----KE-NCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EECSC----ST-THHHHHHHHHHHEEEEEEEEEECC
T ss_pred EECCC----HH-HHHHHHHHHHHHcCCCeEEEEECC
Confidence 98643 22 677899999999999999999753
No 234
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.65 E-value=2.3e-08 Score=100.35 Aligned_cols=97 Identities=18% Similarity=0.230 Sum_probs=73.8
Q ss_pred CCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc--cchhh-ccccccCCCC-Cccceeeec
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTYP-RTYDLIHAD 547 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~-~wce~~~~yp-~t~Dl~H~~ 547 (637)
....+|||+|||.|.++..|.+..- .|+.+|.++.++..+.++ |+ +.... |. +.+ ++| .+||+|.+.
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~-~~l-~~~~~~fD~V~~~ 110 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA-EQM-PFTDERFHIVTCR 110 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CC-CSCTTCEEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecH-HhC-CCCCCCEEEEEEh
Confidence 4467999999999999999988742 777888887898887765 43 22222 22 222 355 899999998
Q ss_pred cccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 548 SIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 548 ~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
.++.... +.+.+|-|+-|+|||||++++.+
T Consensus 111 ~~l~~~~---d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 111 IAAHHFP---NPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp SCGGGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhHhcC---CHHHHHHHHHHHcCCCCEEEEEE
Confidence 7776554 56899999999999999999974
No 235
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.65 E-value=5.9e-08 Score=99.29 Aligned_cols=110 Identities=15% Similarity=0.026 Sum_probs=72.9
Q ss_pred HHHhcccCCCCCEEEEECCCCchHHHHHhhc--C---CEEEEcCccccHHHHHHHHHHcCC-CeEEEEeccccCCC----
Q 006633 209 GKLINLKDGSIRTAIDTGCGVASWGAYLMSR--N---ILAVSFAPRDTHEAQVQFALERGV-PALIGVMASIRLPY---- 278 (637)
Q Consensus 209 ~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~---v~~vdisp~Dls~a~i~~A~erg~-~~~~~~~d~~~Lpf---- 278 (637)
..++...++ .+|||+|||+|..+..|++. + ++++|+++..+..... .+...+. ++.+...|...++.
T Consensus 76 ~~~l~~~~g--~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~-~~~~~g~~~v~~~~~D~~~~~~~~~~ 152 (274)
T 3ajd_A 76 PIVLNPRED--DFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKS-NINRMGVLNTIIINADMRKYKDYLLK 152 (274)
T ss_dssp HHHHCCCTT--CEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHH-HHHHTTCCSEEEEESCHHHHHHHHHH
T ss_pred HHHhCCCCc--CEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHH-HHHHhCCCcEEEEeCChHhcchhhhh
Confidence 344444444 49999999999999999873 2 5556554433332221 1222344 67888888776654
Q ss_pred CCCCeeEEEecccccc-----------------CCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 279 PSRAFDMAHCSRCLIP-----------------WGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 279 pd~sFDlV~~s~~L~h-----------------~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.+++||+|++..-... +.. ....++.++.++|||||.+++++.
T Consensus 153 ~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~-~~~~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 153 NEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSL-RQKELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp TTCCEEEEEEEECCC------------HHHHTGGGT-CHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHH-HHHHHHHHHHHhCCCCCEEEEEEC
Confidence 3678999998521111 112 567899999999999999999875
No 236
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.65 E-value=6.1e-08 Score=101.91 Aligned_cols=98 Identities=12% Similarity=0.093 Sum_probs=71.5
Q ss_pred CEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHcC-----CCeEEEEeccccC--CCCCCCeeEEEecc
Q 006633 220 RTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERG-----VPALIGVMASIRL--PYPSRAFDMAHCSR 290 (637)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~erg-----~~~~~~~~d~~~L--pfpd~sFDlV~~s~ 290 (637)
.+|||||||+|.++.+|+++ ++.++.+ |+++.+++.|++.. ..+.+...|.... .+++++||+|++..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~V---Eidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~ 167 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVV---ELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDV 167 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEE---ESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEE---ECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECC
Confidence 48999999999999999983 4443333 55667777777653 3478888886654 35578999999864
Q ss_pred ccccCC-cC--CHHHHHHHHHhcccCCeEEEEEe
Q 006633 291 CLIPWG-QY--ADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 291 ~L~h~~-~~--d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
.. ++. .. ....+++++.++|||||.|++..
T Consensus 168 ~~-~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 168 FA-GAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp ST-TSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC-ccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 33 322 10 23689999999999999999875
No 237
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.64 E-value=9.1e-07 Score=85.44 Aligned_cols=94 Identities=10% Similarity=0.052 Sum_probs=67.4
Q ss_pred CCEEEEECCCCchHHHHHhhcCC-EEEEcCccccHHHHHHHHHHc----CCCeEEEEeccccCCCCCCCeeEEEeccccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNI-LAVSFAPRDTHEAQVQFALER----GVPALIGVMASIRLPYPSRAFDMAHCSRCLI 293 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v-~~vdisp~Dls~a~i~~A~er----g~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~ 293 (637)
+.+|||+|||+|.++..+++.+. .++.+ |+++.+++.++++ +.++.+...|...++ ++||+|+++..++
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLGAKEVICV---EVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFG 123 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEE---ESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCS
T ss_pred cCEEEEeeCCCCHHHHHHHHcCCCEEEEE---ECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCc
Confidence 45999999999999999998742 23333 4455555555543 336888888887764 4899999998876
Q ss_pred cCCcCCHHHHHHHHHhcccCCeEEEEE
Q 006633 294 PWGQYADGLYLIEVDRVLRPGGYWILS 320 (637)
Q Consensus 294 h~~~~d~~~~L~ei~RvLKPGG~Lvls 320 (637)
++.......++.++.++| ||.+++.
T Consensus 124 ~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 124 SQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp SSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred cccCCchHHHHHHHHHhc--CcEEEEE
Confidence 555335567899999999 6655443
No 238
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.63 E-value=7e-08 Score=93.74 Aligned_cols=93 Identities=14% Similarity=0.050 Sum_probs=65.2
Q ss_pred CCEEEEECCCCchHHHHHhhcC--CEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCC-----------CCCeeE
Q 006633 219 IRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYP-----------SRAFDM 285 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~--v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfp-----------d~sFDl 285 (637)
+.+|||+|||+|.++..+++++ |+++|+++.. ....+.+..+|....+.. .++||+
T Consensus 26 g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~ 94 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSLARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDD 94 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEE
T ss_pred CCEEEEEeecCCHHHHHHHHcCCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHHHHHHhhcccCCcceE
Confidence 4599999999999999999874 5666765531 123577888887765421 148999
Q ss_pred EEeccccc---cCCcC------CHHHHHHHHHhcccCCeEEEEEeC
Q 006633 286 AHCSRCLI---PWGQY------ADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 286 V~~s~~L~---h~~~~------d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
|+|..... ++..+ ....++.++.++|||||.|++...
T Consensus 95 Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 95 VVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp EEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 99965321 11100 134678999999999999998753
No 239
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.63 E-value=4.1e-08 Score=99.05 Aligned_cols=97 Identities=14% Similarity=0.214 Sum_probs=73.8
Q ss_pred CCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCCC-Cccceeee
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-RTYDLIHA 546 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~yp-~t~Dl~H~ 546 (637)
....+|||+|||.|.++..|++.+- .+|+.+|.++.++..+.++ |+ +-+.. |+ +.++ +| .+||+|.+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~~-~~~~~fD~i~~ 120 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVT--GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSM-DDLP-FRNEELDLIWS 120 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCS--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCC-CCTTCEEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccC--CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcCh-hhCC-CCCCCEEEEEE
Confidence 3467999999999999999998743 3566677777888887766 43 22222 32 2332 43 89999999
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 547 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 547 ~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
.++|... +.+.+|-++.|+|||||++++.+
T Consensus 121 ~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 121 EGAIYNI----GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp SSCGGGT----CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cCCceec----CHHHHHHHHHHHcCCCCEEEEEE
Confidence 8888654 57899999999999999999985
No 240
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.62 E-value=1.7e-08 Score=100.97 Aligned_cols=101 Identities=14% Similarity=0.155 Sum_probs=75.9
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc-----cchh-hccccccCCCC-Cccceeeeccc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-----IGTY-QNWCEAMSTYP-RTYDLIHADSI 549 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-----~~~~-~~wce~~~~yp-~t~Dl~H~~~l 549 (637)
....|||+|||.|.++.+|++... -+|+.+|.++.++..+.++.- +-++ .+|-+-...+| .+||.|..+.+
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~ 137 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence 357899999999999999998754 456677777789998887643 1122 24544455676 88999988777
Q ss_pred cccCC--CCcCHHHHHHHHhhcccCCcEEEEE
Q 006633 550 FSLYK--DRCEMEDVLLEMDRILRPEGSVIIR 579 (637)
Q Consensus 550 fs~~~--~~c~~~~~l~e~dRiLrPgG~~i~~ 579 (637)
.+.+. +.-+.+.++-|+-|+|||||.|++-
T Consensus 138 ~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 66543 3345678999999999999999985
No 241
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.62 E-value=4.4e-08 Score=95.05 Aligned_cols=119 Identities=16% Similarity=0.145 Sum_probs=86.4
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh-cccchhhccccccCCCCCccceeeeccccccCCCC
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER-GLIGTYQNWCEAMSTYPRTYDLIHADSIFSLYKDR 556 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR-gl~~~~~~wce~~~~yp~t~Dl~H~~~lfs~~~~~ 556 (637)
..+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++ ++--...|. +.+. .+.+||+|.+.+++.... .
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~~~-~ 117 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAGF---DVDATDGSPELAAEASRRLGRPVRTMLF-HQLD-AIDAYDAVWAHACLLHVP-R 117 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHTSCCEECCG-GGCC-CCSCEEEEEECSCGGGSC-H
T ss_pred CCcEEEECCCCCHHHHHHHHcCC---eEEEECCCHHHHHHHHHhcCCceEEeee-ccCC-CCCcEEEEEecCchhhcC-H
Confidence 56899999999999999998854 567778777889888888 432111122 2233 448999999988776543 2
Q ss_pred cCHHHHHHHHhhcccCCcEEEEEeCH---------------HHHHHHHHHHhcCC-ceeEEe
Q 006633 557 CEMEDVLLEMDRILRPEGSVIIRDDV---------------DILVKIKSITDGME-WEGRIA 602 (637)
Q Consensus 557 c~~~~~l~e~dRiLrPgG~~i~~d~~---------------~~~~~~~~~~~~~~-W~~~~~ 602 (637)
-+...+|-|+-|+|||||++++.... -....+.++++.-. ++....
T Consensus 118 ~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~ 179 (211)
T 3e23_A 118 DELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAV 179 (211)
T ss_dssp HHHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEE
Confidence 35678999999999999999997321 13567777777777 776543
No 242
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.61 E-value=6.5e-08 Score=92.81 Aligned_cols=142 Identities=10% Similarity=0.018 Sum_probs=95.9
Q ss_pred ceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhh----cc---cchhhccccccC-CCCCccceeeec
Q 006633 478 YRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GL---IGTYQNWCEAMS-TYPRTYDLIHAD 547 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~~wce~~~-~yp~t~Dl~H~~ 547 (637)
..+|||+|||.|.++.+|++. +- -+|+.+|.++.++..+.++ |+ +-+++.=.+.+. ..+.+||+|-++
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGEN--GRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTT--CEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEc
Confidence 458999999999999998775 22 1566778777888887766 33 333331123344 335899999987
Q ss_pred ccc-ccC-----CCCcCHHHHHHHHhhcccCCcEEEEEe------CHHHHHHHHHHHhcCC---ceeEEeccCCCCCCcc
Q 006633 548 SIF-SLY-----KDRCEMEDVLLEMDRILRPEGSVIIRD------DVDILVKIKSITDGME---WEGRIADHENGPRQRE 612 (637)
Q Consensus 548 ~lf-s~~-----~~~c~~~~~l~e~dRiLrPgG~~i~~d------~~~~~~~~~~~~~~~~---W~~~~~~~e~~~~~~~ 612 (637)
..| ... ...-+...+|.++-|+|||||.+++.+ ..+....+.+.++.+. |.+..+..-+.+..+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~~~~~~pp 180 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFINQANCPP 180 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEETTCCSCCC
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEeccCccCCC
Confidence 544 110 111133479999999999999999975 1224556666666554 8888777666666778
Q ss_pred eEEEEEecC
Q 006633 613 KILFANKKY 621 (637)
Q Consensus 613 ~~l~~~K~~ 621 (637)
.++|.+|..
T Consensus 181 ~~~~~~~~~ 189 (197)
T 3eey_A 181 ILVCIEKIS 189 (197)
T ss_dssp EEEEEEECC
T ss_pred eEEEEEEcc
Confidence 888888864
No 243
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.61 E-value=3.6e-07 Score=97.73 Aligned_cols=96 Identities=15% Similarity=-0.017 Sum_probs=69.4
Q ss_pred CCEEEEECCCCchHHHHHhhcC--CEEEEcCccccHHHHHHHHHHc----CC-CeEEEEecccc-CCC-CCCCeeEEEec
Q 006633 219 IRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIR-LPY-PSRAFDMAHCS 289 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~--v~~vdisp~Dls~a~i~~A~er----g~-~~~~~~~d~~~-Lpf-pd~sFDlV~~s 289 (637)
+.+|||+| |+|.++..++..+ ..++.+ |+++.+++.|+++ +. ++.+..+|... +|. .+++||+|+++
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~v---Di~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~ 248 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVL---DIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITD 248 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEE---CSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEEC
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEEC
Confidence 45999999 9999999998763 344444 4455555555433 44 68888888877 664 45789999998
Q ss_pred cccccCCcCCHHHHHHHHHhcccCCeE-EEEEe
Q 006633 290 RCLIPWGQYADGLYLIEVDRVLRPGGY-WILSG 321 (637)
Q Consensus 290 ~~L~h~~~~d~~~~L~ei~RvLKPGG~-Lvls~ 321 (637)
..+.+ . ....++.++.++|||||. ++++.
T Consensus 249 ~p~~~-~--~~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 249 PPETL-E--AIRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp CCSSH-H--HHHHHHHHHHHTBCSTTCEEEEEE
T ss_pred CCCch-H--HHHHHHHHHHHHcccCCeEEEEEE
Confidence 76532 2 357899999999999994 45554
No 244
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.61 E-value=9.8e-08 Score=92.33 Aligned_cols=147 Identities=14% Similarity=0.090 Sum_probs=95.9
Q ss_pred cCcchhcchhhHHHHHHHHHHHHHhhhccCCCCCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh--
Q 006633 444 DGVTAEMFREDTALWKKRVTYYKSVDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER-- 521 (637)
Q Consensus 444 ~g~~~~~f~~d~~~w~~~v~~y~~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR-- 521 (637)
+|+..+.|..+...-++.+.. .++..+.. ....+|||+|||.|.++..|++..- ..+|+.+|.++.++..+.++
T Consensus 10 ~g~~d~~f~~~g~~~~~~i~~--~~l~~l~~-~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~ 85 (204)
T 3e05_A 10 GIDDDEFATAKKLITKQEVRA--VTLSKLRL-QDDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLK 85 (204)
T ss_dssp CCCGGGSCCCTTTSCCHHHHH--HHHHHTTC-CTTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHH
T ss_pred CCCCcHHhccCCcCChHHHHH--HHHHHcCC-CCCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHH
Confidence 455566676644443333322 12222333 4467999999999999999987630 02456667776788887765
Q ss_pred --cc--cchhh-ccccccCCCCCccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe-CHHHHHHHHHHHhcC
Q 006633 522 --GL--IGTYQ-NWCEAMSTYPRTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD-DVDILVKIKSITDGM 595 (637)
Q Consensus 522 --gl--~~~~~-~wce~~~~yp~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d-~~~~~~~~~~~~~~~ 595 (637)
|+ +-+++ |..+.+. ....||+|-+++.+. +++.+|-++-|+|||||.+++.. ..+....+.++++..
T Consensus 86 ~~~~~~v~~~~~d~~~~~~-~~~~~D~i~~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~ 158 (204)
T 3e05_A 86 KFVARNVTLVEAFAPEGLD-DLPDPDRVFIGGSGG------MLEEIIDAVDRRLKSEGVIVLNAVTLDTLTKAVEFLEDH 158 (204)
T ss_dssp HHTCTTEEEEECCTTTTCT-TSCCCSEEEESCCTT------CHHHHHHHHHHHCCTTCEEEEEECBHHHHHHHHHHHHHT
T ss_pred HhCCCcEEEEeCChhhhhh-cCCCCCEEEECCCCc------CHHHHHHHHHHhcCCCeEEEEEecccccHHHHHHHHHHC
Confidence 44 22222 2222221 126799998866553 67899999999999999999985 446777888888888
Q ss_pred CceeEE
Q 006633 596 EWEGRI 601 (637)
Q Consensus 596 ~W~~~~ 601 (637)
.|+..+
T Consensus 159 g~~~~~ 164 (204)
T 3e05_A 159 GYMVEV 164 (204)
T ss_dssp TCEEEE
T ss_pred CCceeE
Confidence 886543
No 245
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.61 E-value=3.7e-08 Score=93.09 Aligned_cols=132 Identities=14% Similarity=0.196 Sum_probs=85.6
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc----cchhh-ccccccCCCCCccceeeec
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL----IGTYQ-NWCEAMSTYPRTYDLIHAD 547 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl----~~~~~-~wce~~~~yp~t~Dl~H~~ 547 (637)
...+|||+|||.|.++.+|++.+ -+|..+|.++.++..+.++ |+ +-+++ |+.+.+. +.+||+|.++
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~--~~~~D~v~~~ 126 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADEV---KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK--DRKYNKIITN 126 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--TSCEEEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHcC---CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--cCCceEEEEC
Confidence 46789999999999999998873 3666777776788777766 43 22222 3333211 4789999997
Q ss_pred cccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH-HHHHHHHHHHhcCCceeEEeccCCCCCCcceEEEEEe
Q 006633 548 SIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV-DILVKIKSITDGMEWEGRIADHENGPRQREKILFANK 619 (637)
Q Consensus 548 ~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~-~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~K 619 (637)
..|.. ..-.+..+|-++-|+|+|||.+++.+.. +....+.+.++..-+++.+....+ .-.++.++|
T Consensus 127 ~~~~~--~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~k 193 (194)
T 1dus_A 127 PPIRA--GKEVLHRIIEEGKELLKDNGEIWVVIQTKQGAKSLAKYMKDVFGNVETVTIKG----GYRVLKSKK 193 (194)
T ss_dssp CCSTT--CHHHHHHHHHHHHHHEEEEEEEEEEEESTHHHHHHHHHHHHHHSCCEEEEEET----TEEEEEEEC
T ss_pred CCccc--chhHHHHHHHHHHHHcCCCCEEEEEECCCCChHHHHHHHHHHhcceEEEecCC----cEEEEEEee
Confidence 66542 1234578999999999999999998643 333435554444433444443331 345555554
No 246
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.61 E-value=2.2e-08 Score=102.13 Aligned_cols=100 Identities=19% Similarity=0.288 Sum_probs=74.6
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhc----ccch------hh-ccccccC--CCC-Cccce
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG----LIGT------YQ-NWCEAMS--TYP-RTYDL 543 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg----l~~~------~~-~wce~~~--~yp-~t~Dl 543 (637)
..+|||+|||+|.++..|++.+. +|+.+|.++.++..+.++. .-.. .. |+. .+. -++ .+||+
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~fD~ 133 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL-TLDKDVPAGDGFDA 133 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG-GHHHHSCCTTCEEE
T ss_pred CCEEEEecCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh-hCccccccCCCeEE
Confidence 56899999999999999998865 7888898888999887753 1110 11 111 111 044 89999
Q ss_pred eeec-cccccCCC----CcCHHHHHHHHhhcccCCcEEEEEeC
Q 006633 544 IHAD-SIFSLYKD----RCEMEDVLLEMDRILRPEGSVIIRDD 581 (637)
Q Consensus 544 ~H~~-~lfs~~~~----~c~~~~~l~e~dRiLrPgG~~i~~d~ 581 (637)
|+|. .+|....+ .-....+|-++-|+|||||++++...
T Consensus 134 V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 134 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp EEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9997 57765544 44578999999999999999999864
No 247
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.60 E-value=1.4e-08 Score=101.42 Aligned_cols=99 Identities=19% Similarity=0.273 Sum_probs=75.2
Q ss_pred CCceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhhcc----cchhh-ccccccCCCC-Cccceeeecc
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERGL----IGTYQ-NWCEAMSTYP-RTYDLIHADS 548 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRgl----~~~~~-~wce~~~~yp-~t~Dl~H~~~ 548 (637)
....+|||+|||.|.++.+|++. + .+|+.+|.++.++..+.++.- +-.++ |..+ + ++| .+||+|++.+
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~-~-~~~~~~fD~v~~~~ 128 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKYG---AHTHGIDICSNIVNMANERVSGNNKIIFEANDILT-K-EFPENNFDLIYSRD 128 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC---CEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT-C-CCCTTCEEEEEEES
T ss_pred CCCCEEEEECCCCCHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc-C-CCCCCcEEEEeHHH
Confidence 45679999999999999999886 4 366777777789999888752 22222 3222 2 354 8999999988
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 549 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 549 lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
+|.... .-+...+|-|+-|+|||||.+++.+
T Consensus 129 ~l~~~~-~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 129 AILALS-LENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp CGGGSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhcC-hHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 877552 1356799999999999999999985
No 248
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.60 E-value=8.8e-08 Score=100.28 Aligned_cols=97 Identities=14% Similarity=0.114 Sum_probs=70.2
Q ss_pred CCEEEEECCCCchHHHHHhhc----CCEEEEcCccccHHHHHHHHHHc----------CCCeEEEEecccc-CCCCCCCe
Q 006633 219 IRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFALER----------GVPALIGVMASIR-LPYPSRAF 283 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~----~v~~vdisp~Dls~a~i~~A~er----------g~~~~~~~~d~~~-Lpfpd~sF 283 (637)
..+|||||||+|.++..++++ .++++|+++ .+++.|+++ ...+.+...|... ++..+++|
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~-----~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~f 152 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDG-----ELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERY 152 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCH-----HHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCH-----HHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCc
Confidence 459999999999999999987 255666654 444444332 2457888888765 34456889
Q ss_pred eEEEeccccccC---Cc-C--CHHHHHHHHHhcccCCeEEEEEe
Q 006633 284 DMAHCSRCLIPW---GQ-Y--ADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 284 DlV~~s~~L~h~---~~-~--d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
|+|++.... |+ .+ . ....+++++.++|||||.|++..
T Consensus 153 D~Ii~d~~~-~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 153 DVVIIDLTD-PVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEEEECCC-CBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEECCCC-cccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 999997654 54 11 0 13689999999999999999974
No 249
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.60 E-value=3.3e-08 Score=98.55 Aligned_cols=96 Identities=11% Similarity=0.137 Sum_probs=71.2
Q ss_pred CceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCCCCccceeeec
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYPRTYDLIHAD 547 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~yp~t~Dl~H~~ 547 (637)
...+|||+|||.|.++.+|++. +. +|+.+|.++.++..+.++ |+ +.+.+ |+. .+.. +.+||+|.+.
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~-~~~~-~~~fD~V~~~ 110 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDHGI---TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA-GYVA-NEKCDVAACV 110 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHTCC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT-TCCC-SSCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCC---eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH-hCCc-CCCCCEEEEC
Confidence 3568999999999999999765 32 456677777888887665 44 22222 222 2222 6899999997
Q ss_pred cccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 548 SIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 548 ~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
+++-... +...+|-|+-|+|||||.+++.+
T Consensus 111 ~~~~~~~---~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 111 GATWIAG---GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp SCGGGTS---SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred CChHhcC---CHHHHHHHHHHHcCCCeEEEEec
Confidence 7775444 46899999999999999999985
No 250
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.60 E-value=3.6e-08 Score=103.05 Aligned_cols=98 Identities=17% Similarity=0.179 Sum_probs=65.3
Q ss_pred CCEEEEECCCCchHHHHHhhc-CCEEEEc----CccccHHHHHHHHHHcC-CCeEEEEe-ccccCCCCCCCeeEEEeccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSR-NILAVSF----APRDTHEAQVQFALERG-VPALIGVM-ASIRLPYPSRAFDMAHCSRC 291 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~-~v~~vdi----sp~Dls~a~i~~A~erg-~~~~~~~~-d~~~Lpfpd~sFDlV~~s~~ 291 (637)
+.+|||+|||+|.++..++++ .|+++|+ ++..+.. .. ....+ ..+.+... |...++ .++||+|+|..+
T Consensus 83 g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~--~~-~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd~~ 157 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEP--IP-MSTYGWNLVRLQSGVDVFFIP--PERCDTLLCDIG 157 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC--CC-CCSTTGGGEEEECSCCTTTSC--CCCCSEEEECCC
T ss_pred CCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHH--HH-hhhcCCCCeEEEeccccccCC--cCCCCEEEECCc
Confidence 459999999999999999987 4777877 3322210 00 00111 23666666 665554 568999999766
Q ss_pred cc--cCCcCCHH---HHHHHHHhcccCCeEEEEEeC
Q 006633 292 LI--PWGQYADG---LYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 292 L~--h~~~~d~~---~~L~ei~RvLKPGG~Lvls~p 322 (637)
++ ++.. +.. .+|.++.++|||||.|++..+
T Consensus 158 ~~~g~~~~-d~~~~l~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 158 ESSPNPTV-EAGRTLRVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CCCSSHHH-HHHHHHHHHHHHHHHCCTTCEEEEEES
T ss_pred cccCcchh-hHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 52 2221 222 478999999999999998754
No 251
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.60 E-value=5.3e-08 Score=91.24 Aligned_cols=110 Identities=7% Similarity=0.084 Sum_probs=84.1
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc--cchhh-ccccccCCCC-Cccceeeeccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTYP-RTYDLIHADSI 549 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~-~wce~~~~yp-~t~Dl~H~~~l 549 (637)
..+|||+|||.|.++.+|++.. .+|+.+|.++.++..+.++ |+ +-+++ |+.+ .+| .+||+|.++++
T Consensus 36 ~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~---~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 36 DDVVVDVGCGSGGMTVEIAKRC---KFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED---VLDKLEFNKAFIGGT 109 (183)
T ss_dssp TCEEEEESCCCSHHHHHHHTTS---SEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH---HGGGCCCSEEEECSC
T ss_pred CCEEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc---cccCCCCcEEEECCc
Confidence 5689999999999999998843 3566667776788877766 43 22222 3333 344 68999999766
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEe-CHHHHHHHHHHHhcCCceeEEe
Q 006633 550 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRD-DVDILVKIKSITDGMEWEGRIA 602 (637)
Q Consensus 550 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d-~~~~~~~~~~~~~~~~W~~~~~ 602 (637)
..++.+|-++.|+ |||.+++.+ ..+....+.+.++...|++...
T Consensus 110 -------~~~~~~l~~~~~~--~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 110 -------KNIEKIIEILDKK--KINHIVANTIVLENAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp -------SCHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred -------ccHHHHHHHHhhC--CCCEEEEEecccccHHHHHHHHHHcCCeEEEE
Confidence 5678999999999 999999987 5677788888888888988765
No 252
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.60 E-value=1.4e-07 Score=97.02 Aligned_cols=97 Identities=9% Similarity=0.139 Sum_probs=69.7
Q ss_pred CCEEEEECCCCchHHHHHhhc-C---CEEEEcCccccHHHHHHHHHHc---------CCCeEEEEecccc-CCCCCCCee
Q 006633 219 IRTAIDTGCGVASWGAYLMSR-N---ILAVSFAPRDTHEAQVQFALER---------GVPALIGVMASIR-LPYPSRAFD 284 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~-~---v~~vdisp~Dls~a~i~~A~er---------g~~~~~~~~d~~~-Lpfpd~sFD 284 (637)
.++|||||||+|.++..++++ + +++++++ +.+++.|+++ ...+.+...|... ++..+++||
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid-----~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD 150 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLVDID-----GKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYD 150 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEEESC-----HHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEE
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEEECC-----HHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCee
Confidence 469999999999999999987 3 4555554 4455555432 2357888888654 344467899
Q ss_pred EEEeccccccCCcC---CHHHHHHHHHhcccCCeEEEEEe
Q 006633 285 MAHCSRCLIPWGQY---ADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 285 lV~~s~~L~h~~~~---d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+|++.... ++... ....+++++.++|||||.+++..
T Consensus 151 ~Ii~d~~~-~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 151 VIMVDSTE-PVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp EEEESCSS-CCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99996543 33211 13679999999999999999974
No 253
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.60 E-value=3.6e-08 Score=97.34 Aligned_cols=118 Identities=16% Similarity=0.072 Sum_probs=85.5
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcccchhhccccccC--CC-CCccceeeeccccccCC
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMS--TY-PRTYDLIHADSIFSLYK 554 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~~wce~~~--~y-p~t~Dl~H~~~lfs~~~ 554 (637)
..+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.+++...-++-.+..+. .+ +.+||+|.+.++|....
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 130 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRTGY---KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTE 130 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSS
T ss_pred CCeEEEEcCCCCHHHHHHHHcCC---eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhcc
Confidence 45899999999999999998865 56777877789999998853221111122222 24 38999999988877553
Q ss_pred CCcCHHHHHHHHhhcccCCcEEEEEeCH----------------------HHHHHHHHHHhcCCceeEE
Q 006633 555 DRCEMEDVLLEMDRILRPEGSVIIRDDV----------------------DILVKIKSITDGMEWEGRI 601 (637)
Q Consensus 555 ~~c~~~~~l~e~dRiLrPgG~~i~~d~~----------------------~~~~~~~~~~~~~~W~~~~ 601 (637)
+...+|.++-|+|||||.++|.+.. -....++++++...+++..
T Consensus 131 ---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 196 (242)
T 3l8d_A 131 ---EPLRALNEIKRVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVD 196 (242)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEE
T ss_pred ---CHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEE
Confidence 5579999999999999999998511 0124577777777777653
No 254
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.59 E-value=8.2e-08 Score=99.09 Aligned_cols=109 Identities=17% Similarity=0.112 Sum_probs=72.7
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc----C--CCeEEEEecccc
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----G--VPALIGVMASIR 275 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er----g--~~~~~~~~d~~~ 275 (637)
...++.+.+.+...++ .+|||||||+|.++..|++++..++.+ |+++.+++.++++ + .++.+..+|...
T Consensus 14 ~~i~~~i~~~~~~~~~--~~VLDiG~G~G~lt~~L~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~ 88 (285)
T 1zq9_A 14 PLIINSIIDKAALRPT--DVVLEVGPGTGNMTVKLLEKAKKVVAC---ELDPRLVAELHKRVQGTPVASKLQVLVGDVLK 88 (285)
T ss_dssp HHHHHHHHHHTCCCTT--CEEEEECCTTSTTHHHHHHHSSEEEEE---ESCHHHHHHHHHHHTTSTTGGGEEEEESCTTT
T ss_pred HHHHHHHHHhcCCCCC--CEEEEEcCcccHHHHHHHhhCCEEEEE---ECCHHHHHHHHHHHHhcCCCCceEEEEcceec
Confidence 3456677777765544 499999999999999999885444444 4455555555543 2 257888888888
Q ss_pred CCCCCCCeeEEEeccccccCCcCCHHHHH--------------HHH--HhcccCCeEEE
Q 006633 276 LPYPSRAFDMAHCSRCLIPWGQYADGLYL--------------IEV--DRVLRPGGYWI 318 (637)
Q Consensus 276 Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L--------------~ei--~RvLKPGG~Lv 318 (637)
++++ +||+|+++..+ +|..+....++ +|+ .++|||||.++
T Consensus 89 ~~~~--~fD~vv~nlpy-~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 89 TDLP--FFDTCVANLPY-QISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp SCCC--CCSEEEEECCG-GGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred ccch--hhcEEEEecCc-ccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 7766 79999997655 44421111222 233 36899999873
No 255
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.59 E-value=1e-07 Score=93.41 Aligned_cols=90 Identities=20% Similarity=0.245 Sum_probs=69.4
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcccchhh-ccccccCCCC-CccceeeeccccccCCC
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQ-NWCEAMSTYP-RTYDLIHADSIFSLYKD 555 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~-~wce~~~~yp-~t~Dl~H~~~lfs~~~~ 555 (637)
..+|||+|||.|.++..|.+. +.+|.++.++..+.++++ .++. |. +.+ +++ .+||+|.+.+++....
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~~~-~~~~~d~-~~~-~~~~~~fD~v~~~~~l~~~~- 116 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKRGV-FVLKGTA-ENL-PLKDESFDFALMVTTICFVD- 116 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHTTC-EEEECBT-TBC-CSCTTCEEEEEEESCGGGSS-
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhcCC-EEEEccc-ccC-CCCCCCeeEEEEcchHhhcc-
Confidence 568999999999999999887 445666688999988854 2222 21 222 244 7999999988876543
Q ss_pred CcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 556 RCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 556 ~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
+...+|-++-|+|+|||.+++.+
T Consensus 117 --~~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 117 --DPERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp --CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CHHHHHHHHHHHcCCCcEEEEEE
Confidence 45899999999999999999974
No 256
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.59 E-value=5e-08 Score=97.00 Aligned_cols=98 Identities=20% Similarity=0.342 Sum_probs=73.6
Q ss_pred CCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc--cchhhccccccCCCC-Cccceeeecc
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQNWCEAMSTYP-RTYDLIHADS 548 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~~wce~~~~yp-~t~Dl~H~~~ 548 (637)
....+|||+|||.|.++.+|++..- +|+.+|.++.++..+.++ |+ +-+.+.=.+.++ ++ .+||+|.+..
T Consensus 20 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~ 95 (239)
T 1xxl_A 20 RAEHRVLDIGAGAGHTALAFSPYVQ---ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-FPDDSFDIITCRY 95 (239)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-SCTTCEEEEEEES
T ss_pred CCCCEEEEEccCcCHHHHHHHHhCC---EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC-CCCCcEEEEEECC
Confidence 4467999999999999999988743 677778877888877665 43 222221123333 44 8999999987
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 549 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 549 lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
++.... +.+.+|.|+.|+|||||++++.+
T Consensus 96 ~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 96 AAHHFS---DVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp CGGGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhcc---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 776554 56899999999999999999975
No 257
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.59 E-value=1.7e-07 Score=98.60 Aligned_cols=99 Identities=12% Similarity=0.107 Sum_probs=69.4
Q ss_pred CCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHcC---------CCeEEEEecccc-CCCCCCCeeEE
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERG---------VPALIGVMASIR-LPYPSRAFDMA 286 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~erg---------~~~~~~~~d~~~-Lpfpd~sFDlV 286 (637)
..+|||||||+|.++..++++ ...++.+ |+++.+++.|+++. ..+.+...|... ++..+++||+|
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~v---Dis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvI 193 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVENIDIC---EIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 193 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCEEEEE---ESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCEEEEE---ECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence 459999999999999999987 2233333 44556666665542 347788777654 23346789999
Q ss_pred EeccccccCCcC-C--HHHHHHHHHhcccCCeEEEEEe
Q 006633 287 HCSRCLIPWGQY-A--DGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 287 ~~s~~L~h~~~~-d--~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
++... .++... . ...+++++.++|||||.+++..
T Consensus 194 i~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 194 IVDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EEECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 98653 233211 1 2689999999999999999975
No 258
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.59 E-value=5.8e-08 Score=96.87 Aligned_cols=106 Identities=12% Similarity=0.155 Sum_probs=78.3
Q ss_pred HhhhccCCCCCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc---cchhh-ccccccCCCC-Ccc
Q 006633 467 SVDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL---IGTYQ-NWCEAMSTYP-RTY 541 (637)
Q Consensus 467 ~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl---~~~~~-~wce~~~~yp-~t~ 541 (637)
.++..+.. ....+|||+|||.|.++.+|++.+.- +|+.+|.++.++..+.++.- +.... |. +.++ +| .+|
T Consensus 35 ~l~~~~~~-~~~~~vLD~GcG~G~~~~~l~~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~-~~~~~f 109 (253)
T 3g5l_A 35 ELKKMLPD-FNQKTVLDLGCGFGWHCIYAAEHGAK--KVLGIDLSERMLTEAKRKTTSPVVCYEQKAI-EDIA-IEPDAY 109 (253)
T ss_dssp HHHTTCCC-CTTCEEEEETCTTCHHHHHHHHTTCS--EEEEEESCHHHHHHHHHHCCCTTEEEEECCG-GGCC-CCTTCE
T ss_pred HHHHhhhc-cCCCEEEEECCCCCHHHHHHHHcCCC--EEEEEECCHHHHHHHHHhhccCCeEEEEcch-hhCC-CCCCCe
Confidence 33333443 45789999999999999999887542 66777887789998888753 22222 22 2232 44 899
Q ss_pred ceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 542 DLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 542 Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
|+|.+.++|... -+...+|-++-|+|||||.+++..
T Consensus 110 D~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 110 NVVLSSLALHYI---ASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp EEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEEchhhhhh---hhHHHHHHHHHHHcCCCcEEEEEe
Confidence 999998887765 356899999999999999999973
No 259
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.59 E-value=1.9e-07 Score=97.96 Aligned_cols=99 Identities=13% Similarity=0.047 Sum_probs=66.7
Q ss_pred CCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHcC---------CCeEEEEecccc-CCCCCCCeeEE
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERG---------VPALIGVMASIR-LPYPSRAFDMA 286 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~erg---------~~~~~~~~d~~~-Lpfpd~sFDlV 286 (637)
..+|||||||+|.++..++++ ...++.+ |+++.+++.|+++. ..+.+...|... ++..+++||+|
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~v---Did~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I 185 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMC---EIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVI 185 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEE---CSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEE---ECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEE
Confidence 459999999999999999987 2333333 55566666666542 346777777654 33356789999
Q ss_pred EeccccccCCcC-CH--HHHHHHHHhcccCCeEEEEEe
Q 006633 287 HCSRCLIPWGQY-AD--GLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 287 ~~s~~L~h~~~~-d~--~~~L~ei~RvLKPGG~Lvls~ 321 (637)
++... .|+.+. .. ..+++++.++|||||.+++..
T Consensus 186 i~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 186 ITDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 98653 344321 11 678999999999999999975
No 260
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.59 E-value=7.1e-08 Score=94.81 Aligned_cols=117 Identities=15% Similarity=0.119 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHhhhccCCCCCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc-cchhh-cccccc
Q 006633 457 LWKKRVTYYKSVDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IGTYQ-NWCEAM 534 (637)
Q Consensus 457 ~w~~~v~~y~~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-~~~~~-~wce~~ 534 (637)
.|......+..++..... ...+|||+|||.|.++..|++... +|+.+|.++.++..+.++.- +..++ |.. .+
T Consensus 22 ~~~~~~~~~~~~l~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~-~~ 95 (239)
T 3bxo_A 22 DYAAEASDIADLVRSRTP--EASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRLPDATLHQGDMR-DF 95 (239)
T ss_dssp CHHHHHHHHHHHHHHHCT--TCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHCTTCEEEECCTT-TC
T ss_pred hHHHHHHHHHHHHHHhcC--CCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhCCCCEEEECCHH-Hc
Confidence 344444444444433222 256899999999999999987643 56777887789988888731 22222 221 22
Q ss_pred CCCCCccceeee-ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 535 STYPRTYDLIHA-DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 535 ~~yp~t~Dl~H~-~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
+ ++.+||+|.| .++|....+.-+...+|-++-|+|||||.+++.+
T Consensus 96 ~-~~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (239)
T 3bxo_A 96 R-LGRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEP 141 (239)
T ss_dssp C-CSSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred c-cCCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 2 2689999995 4466655444566799999999999999999963
No 261
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.59 E-value=1.6e-07 Score=93.84 Aligned_cols=142 Identities=9% Similarity=0.032 Sum_probs=93.0
Q ss_pred CCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc--------------------------------
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-------------------------------- 523 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-------------------------------- 523 (637)
....+|||+|||.|.++..|++... -+|+.+|.++.++..+.++--
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4468999999999999999988765 577888888788888765421
Q ss_pred ---c-chhh-ccccccCC-CC---CccceeeeccccccCC-CCcCHHHHHHHHhhcccCCcEEEEEeCHH----------
Q 006633 524 ---I-GTYQ-NWCEAMST-YP---RTYDLIHADSIFSLYK-DRCEMEDVLLEMDRILRPEGSVIIRDDVD---------- 583 (637)
Q Consensus 524 ---~-~~~~-~wce~~~~-yp---~t~Dl~H~~~lfs~~~-~~c~~~~~l~e~dRiLrPgG~~i~~d~~~---------- 583 (637)
+ ..++ |..+ ... -+ .+||+|.+..++.... +.-+...+|-++-|+|||||++|+.+...
T Consensus 133 ~~~v~~~~~~d~~~-~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~ 211 (265)
T 2i62_A 133 RRAIKQVLKCDVTQ-SQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMIGEQK 211 (265)
T ss_dssp HHHEEEEEECCTTS-SSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEETTEE
T ss_pred hhhheeEEEeeecc-CCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEcCCcc
Confidence 2 2221 2222 222 23 7999999977766322 22245789999999999999999976211
Q ss_pred ------HHHHHHHHHhcCCceeEEeccCCC-------CCCcceEEEEEec
Q 006633 584 ------ILVKIKSITDGMEWEGRIADHENG-------PRQREKILFANKK 620 (637)
Q Consensus 584 ------~~~~~~~~~~~~~W~~~~~~~e~~-------~~~~~~~l~~~K~ 620 (637)
....+.++++...++......... .....-+++++|+
T Consensus 212 ~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~ 261 (265)
T 2i62_A 212 FSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKP 261 (265)
T ss_dssp EECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECC
T ss_pred ccccccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEeccc
Confidence 234677777777777654332211 1113446777774
No 262
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.59 E-value=9.7e-08 Score=99.64 Aligned_cols=97 Identities=15% Similarity=0.163 Sum_probs=67.1
Q ss_pred CCEEEEECCCCchHHHHHhhcC----CEEEEcCccccHHHHHHHHHHc---------CCCeEEEEecccc-CCCCCCCee
Q 006633 219 IRTAIDTGCGVASWGAYLMSRN----ILAVSFAPRDTHEAQVQFALER---------GVPALIGVMASIR-LPYPSRAFD 284 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~----v~~vdisp~Dls~a~i~~A~er---------g~~~~~~~~d~~~-Lpfpd~sFD 284 (637)
..+|||||||+|.++..++++. ++++|++ +.+++.|+++ ...+.+...|... ++..+++||
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid-----~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD 170 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQCEID-----EDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFD 170 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESC-----HHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEEECC-----HHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCce
Confidence 4699999999999999999872 4555554 4455555432 3457888887654 444568899
Q ss_pred EEEeccccccCCcC---CHHHHHHHHHhcccCCeEEEEEe
Q 006633 285 MAHCSRCLIPWGQY---ADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 285 lV~~s~~L~h~~~~---d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+|++.... ++... ....+++++.++|||||.|++..
T Consensus 171 ~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 171 VIITDSSD-PMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEEECC------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCC-CCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 99986533 33210 23468999999999999999975
No 263
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.59 E-value=4.8e-08 Score=97.46 Aligned_cols=95 Identities=14% Similarity=0.202 Sum_probs=71.8
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCCC-Cccceeeecc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-RTYDLIHADS 548 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~yp-~t~Dl~H~~~ 548 (637)
..+|||+|||.|.++..|++..- -.|+.+|.++.++..+.++ |+ +-+++ |+ +.++ +| .+||+|++.+
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~~-~~~~~fD~v~~~~ 122 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSM-DNLP-FQNEELDLIWSEG 122 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCT-TSCS-SCTTCEEEEEEES
T ss_pred CCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECCh-hhCC-CCCCCEEEEEecC
Confidence 56899999999999999987631 1667777777788877665 44 22222 32 2332 33 8999999988
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 549 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 549 lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
++... +.+.+|-++-|+|||||++++.+
T Consensus 123 ~l~~~----~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 123 AIYNI----GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp CSCCC----CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hHhhc----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 87654 57899999999999999999986
No 264
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.59 E-value=5.5e-08 Score=99.50 Aligned_cols=96 Identities=27% Similarity=0.306 Sum_probs=72.8
Q ss_pred CceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCCC-Cccceeee
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-RTYDLIHA 546 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~yp-~t~Dl~H~ 546 (637)
...+|||+|||.|.++..|++. +. +|+.+|.++.++..+.++ |+ +...+ |. +.+ ++| .+||+|.+
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~-~~~-~~~~~~fD~v~~ 156 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGV---SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF-LEI-PCEDNSYDFIWS 156 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCC---EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT-TSC-SSCTTCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCC---EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCc-ccC-CCCCCCEeEEEe
Confidence 3679999999999999999876 54 667777777888877665 44 22222 22 122 344 79999999
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 547 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 547 ~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
.+++....+ ...+|-|+-|+|||||.+++.+
T Consensus 157 ~~~l~~~~~---~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 157 QDAFLHSPD---KLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp ESCGGGCSC---HHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhhcCC---HHHHHHHHHHHcCCCeEEEEEE
Confidence 888876654 6899999999999999999985
No 265
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.58 E-value=1.4e-07 Score=98.09 Aligned_cols=134 Identities=15% Similarity=0.164 Sum_probs=91.8
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh--cccch----hhccccccCCCC-Cccceeeeccc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER--GLIGT----YQNWCEAMSTYP-RTYDLIHADSI 549 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR--gl~~~----~~~wce~~~~yp-~t~Dl~H~~~l 549 (637)
..++|||+|||+|+|+..|++.+. -.|+.+|.+++||...+.+ .++.. ..... ...+| .+||++-++-.
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga--~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~--~~~l~~~~fD~v~~d~s 160 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGA--KLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAE--PVDFTEGLPSFASIDVS 160 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--SEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCC--GGGCTTCCCSEEEECCS
T ss_pred cccEEEecCCCccHHHHHHHhCCC--CEEEEEECCHHHHHHHHHhCcccceecccCceecc--hhhCCCCCCCEEEEEee
Confidence 467999999999999999988753 3566778888899886542 11111 11111 12245 45999999877
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEeC----------------------HHHHHHHHHHHhcCCceeEEec--cC
Q 006633 550 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD----------------------VDILVKIKSITDGMEWEGRIAD--HE 605 (637)
Q Consensus 550 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~----------------------~~~~~~~~~~~~~~~W~~~~~~--~e 605 (637)
|. .++.+|-|+.|+|||||.+++-.. ...+.++.+.+....|.+.-.. .-
T Consensus 161 f~------sl~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi 234 (291)
T 3hp7_A 161 FI------SLNLILPALAKILVDGGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPI 234 (291)
T ss_dssp SS------CGGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSS
T ss_pred Hh------hHHHHHHHHHHHcCcCCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
Confidence 75 358899999999999999988611 1256778888888899877443 22
Q ss_pred CCCC-CcceEEEEEec
Q 006633 606 NGPR-QREKILFANKK 620 (637)
Q Consensus 606 ~~~~-~~~~~l~~~K~ 620 (637)
.|+. +.|-++.++|.
T Consensus 235 ~g~~gn~e~l~~~~~~ 250 (291)
T 3hp7_A 235 QGGHGNIEFLAHLEKT 250 (291)
T ss_dssp CCGGGCCCEEEEEEEC
T ss_pred CCCCcCHHHHHHhhhc
Confidence 3333 35677777663
No 266
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.58 E-value=7.5e-08 Score=97.20 Aligned_cols=96 Identities=10% Similarity=0.051 Sum_probs=67.5
Q ss_pred CEEEEECCCCchHHHHHhhc---C--CEEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccC-C-C-----CCCCeeE
Q 006633 220 RTAIDTGCGVASWGAYLMSR---N--ILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRL-P-Y-----PSRAFDM 285 (637)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~---~--v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~L-p-f-----pd~sFDl 285 (637)
.+|||||||+|..+..|++. + ++++|+++..+..+...+ .+.+. .+.+..++.... + + ++++||+
T Consensus 81 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~-~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 159 (247)
T 1sui_A 81 KNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVI-KKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDF 159 (247)
T ss_dssp CEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHH-HHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSE
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEE
Confidence 48999999999999999875 3 556666554333332222 22343 477777776542 3 2 2578999
Q ss_pred EEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 286 AHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 286 V~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
|++... .. +...+++++.++|||||.+++..
T Consensus 160 V~~d~~----~~-~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 160 IFVDAD----KD-NYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEECSC----ST-THHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEcCc----hH-HHHHHHHHHHHhCCCCeEEEEec
Confidence 998642 23 67889999999999999999874
No 267
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.58 E-value=6.9e-08 Score=93.92 Aligned_cols=134 Identities=16% Similarity=0.126 Sum_probs=93.3
Q ss_pred CceeEeeecccchhhhhhhcCCC--eEEEEeccCCCCcchhHHHHhh----cc--cchhh-ccccccCCCC-Cccceeee
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDP--LWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTYP-RTYDLIHA 546 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~--v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~-~wce~~~~yp-~t~Dl~H~ 546 (637)
...+|||+|||.|.++.+|++.. - ..|+.+|.++.++..+.++ |+ +-.+. |. +.+. ++ .+||+|.+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~-~~~~~fD~v~~ 112 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEK--GKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEE-NKIP-LPDNTVDFIFM 112 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTT--CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBT-TBCS-SCSSCEEEEEE
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCC--cEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccc-ccCC-CCCCCeeEEEe
Confidence 36689999999999999997652 1 1456667666788777666 33 22222 22 2222 44 78999999
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH-------------HHHHHHHHHHhcCCceeEEeccCCCCCCcce
Q 006633 547 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV-------------DILVKIKSITDGMEWEGRIADHENGPRQREK 613 (637)
Q Consensus 547 ~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~-------------~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~ 613 (637)
.+++.... +...+|-|+-|+|||||.+++.+.. -....+.++++...++......- + ....
T Consensus 113 ~~~l~~~~---~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~-~--~~~~ 186 (219)
T 3dh0_A 113 AFTFHELS---EPLKFLEELKRVAKPFAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEV-G--KYCF 186 (219)
T ss_dssp ESCGGGCS---SHHHHHHHHHHHEEEEEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEE-T--TTEE
T ss_pred ehhhhhcC---CHHHHHHHHHHHhCCCeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEee-C--CceE
Confidence 88887654 4589999999999999999998521 13577888888888886543222 1 2467
Q ss_pred EEEEEec
Q 006633 614 ILFANKK 620 (637)
Q Consensus 614 ~l~~~K~ 620 (637)
+++++|+
T Consensus 187 ~~~~~k~ 193 (219)
T 3dh0_A 187 GVYAMIV 193 (219)
T ss_dssp EEEEECC
T ss_pred EEEEEec
Confidence 7888885
No 268
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.58 E-value=6.3e-08 Score=98.62 Aligned_cols=107 Identities=14% Similarity=0.155 Sum_probs=78.8
Q ss_pred HhhhccCCCCCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhhccccccCCC-C
Q 006633 467 SVDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQNWCEAMSTY-P 538 (637)
Q Consensus 467 ~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~~wce~~~~y-p 538 (637)
.++..+.. . ..+|||+|||.|.++..|++.+. +|+.+|.++.++..+.++ |+ +..++.=.+.+..+ +
T Consensus 60 ~~l~~~~~-~-~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 134 (285)
T 4htf_A 60 RVLAEMGP-Q-KLRVLDAGGGEGQTAIKMAERGH---QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLE 134 (285)
T ss_dssp HHHHHTCS-S-CCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCS
T ss_pred HHHHhcCC-C-CCEEEEeCCcchHHHHHHHHCCC---EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcC
Confidence 44444443 2 46899999999999999988854 567777777888888776 44 22333112334434 4
Q ss_pred CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006633 539 RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 581 (637)
Q Consensus 539 ~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 581 (637)
.+||+|.+.+++.... +.+.+|-|+-|+|||||.+++.+.
T Consensus 135 ~~fD~v~~~~~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 135 TPVDLILFHAVLEWVA---DPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp SCEEEEEEESCGGGCS---CHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCceEEEECchhhccc---CHHHHHHHHHHHcCCCeEEEEEEe
Confidence 8999999988887654 458999999999999999999753
No 269
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.58 E-value=2.9e-07 Score=95.58 Aligned_cols=97 Identities=10% Similarity=0.035 Sum_probs=66.9
Q ss_pred CCEEEEECCCCchHHHHHhhc----CCEEEEcCccccHHHHHHHHHHc---------CCCeEEEEecccc-CCCCCCCee
Q 006633 219 IRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFALER---------GVPALIGVMASIR-LPYPSRAFD 284 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~----~v~~vdisp~Dls~a~i~~A~er---------g~~~~~~~~d~~~-Lpfpd~sFD 284 (637)
..+|||||||+|.++..++++ .++++|+++ .+++.|+++ ...+.+...|... ++..+++||
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~-----~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD 165 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDG-----LVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFD 165 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCH-----HHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCH-----HHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCce
Confidence 459999999999999999987 245565544 444444432 2457888887654 344567899
Q ss_pred EEEeccccccCCcC----CHHHHHHHHHhcccCCeEEEEEe
Q 006633 285 MAHCSRCLIPWGQY----ADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 285 lV~~s~~L~h~~~~----d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+|++... .++... ....+++++.++|||||.|++..
T Consensus 166 ~Ii~d~~-~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 166 VIIIDST-DPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEEEEC-----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEEcCC-CcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9998532 231110 23679999999999999999974
No 270
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.57 E-value=3.3e-08 Score=98.18 Aligned_cols=123 Identities=17% Similarity=0.181 Sum_probs=87.0
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc------cchhh-ccccccCCCCCccceeeeccc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL------IGTYQ-NWCEAMSTYPRTYDLIHADSI 549 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl------~~~~~-~wce~~~~yp~t~Dl~H~~~l 549 (637)
...+|||+|||.|.++.+|++.. ..+|+.+|.++.++..+.++.- +-.+. |+ +.+..-+.+||+|.+..+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~ 155 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGL-QDFTPEPDSYDVIWIQWV 155 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCG-GGCCCCSSCEEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcCh-hhcCCCCCCEEEEEEcch
Confidence 46799999999999999998875 2356777777788888877642 11222 21 222222368999999887
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEeCHH---------------HHHHHHHHHhcCCceeEEec
Q 006633 550 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDVD---------------ILVKIKSITDGMEWEGRIAD 603 (637)
Q Consensus 550 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~---------------~~~~~~~~~~~~~W~~~~~~ 603 (637)
+....+. .+..+|.++-|+|||||.+++.+... ....+.++++...++.....
T Consensus 156 l~~~~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 156 IGHLTDQ-HLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEE 223 (241)
T ss_dssp GGGSCHH-HHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEE
T ss_pred hhhCCHH-HHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEee
Confidence 7654431 24689999999999999999976311 35677888888888776543
No 271
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.57 E-value=7.4e-08 Score=97.93 Aligned_cols=97 Identities=9% Similarity=0.139 Sum_probs=73.3
Q ss_pred CCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc-cchhh-ccccccCCCCCccceeeeccccccC
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IGTYQ-NWCEAMSTYPRTYDLIHADSIFSLY 553 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-~~~~~-~wce~~~~yp~t~Dl~H~~~lfs~~ 553 (637)
....+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++.- +.... |. +.++ ++.+||+|++..+|...
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~d~-~~~~-~~~~fD~v~~~~~l~~~ 130 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQSGA---EVLGTDNAATMIEKARQNYPHLHFDVADA-RNFR-VDKPLDAVFSNAMLHWV 130 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSCEEECCT-TTCC-CSSCEEEEEEESCGGGC
T ss_pred CCCCEEEEecCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHhhCCCCEEEECCh-hhCC-cCCCcCEEEEcchhhhC
Confidence 3467999999999999999988543 56677777789988887731 12221 22 2232 47899999998877654
Q ss_pred CCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 554 KDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 554 ~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
. +.+.+|-|+-|+|||||++++..
T Consensus 131 ~---d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 131 K---EPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp S---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c---CHHHHHHHHHHhcCCCcEEEEEe
Confidence 3 56899999999999999999974
No 272
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.57 E-value=7e-08 Score=93.33 Aligned_cols=117 Identities=17% Similarity=0.156 Sum_probs=85.5
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cccchhhccccccCC-CCCccceeeecccccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMST-YPRTYDLIHADSIFSL 552 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl~~~~~~wce~~~~-yp~t~Dl~H~~~lfs~ 552 (637)
..+|||+|||.|.++.+|++.+. .+|+.+|.++.++..+.++ |+-. +.-.+..+.. .+.+||+|.++.++.
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~fD~i~~~~~~~- 136 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGA--KSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADVDGKFDLIVANILAE- 136 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTCCSCEEEEEEESCHH-
T ss_pred CCEEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccCCCCceEEEECCcHH-
Confidence 46899999999999999988764 3667777777888888776 5422 2212222233 359999999976653
Q ss_pred CCCCcCHHHHHHHHhhcccCCcEEEEEe-CHHHHHHHHHHHhcCCceeEEec
Q 006633 553 YKDRCEMEDVLLEMDRILRPEGSVIIRD-DVDILVKIKSITDGMEWEGRIAD 603 (637)
Q Consensus 553 ~~~~c~~~~~l~e~dRiLrPgG~~i~~d-~~~~~~~~~~~~~~~~W~~~~~~ 603 (637)
.+..+|-++-|+|||||++++.+ ..+....+.++++...++.....
T Consensus 137 -----~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 137 -----ILLDLIPQLDSHLNEDGQVIFSGIDYLQLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp -----HHHHHGGGSGGGEEEEEEEEEEEEEGGGHHHHHHHHHHTTEEEEEEE
T ss_pred -----HHHHHHHHHHHhcCCCCEEEEEecCcccHHHHHHHHHHcCCceEEee
Confidence 25788999999999999999975 34456777888887778776543
No 273
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.57 E-value=1.8e-07 Score=87.63 Aligned_cols=116 Identities=16% Similarity=0.110 Sum_probs=82.3
Q ss_pred CCceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----ccc-c-hhh-ccccccCCCCCccceeeec
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GLI-G-TYQ-NWCEAMSTYPRTYDLIHAD 547 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl~-~-~~~-~wce~~~~yp~t~Dl~H~~ 547 (637)
....+|||+|||.|.++.+|++. +- ..|+.+|.++.++..+.++ |+- . .++ |..+.+...+.+||+|.+.
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQ--TTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSS--EEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEEC
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCC--CeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEEC
Confidence 34679999999999999998876 22 4566777777788888765 442 1 222 3334444434789999986
Q ss_pred cccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-HHHHHHHHHHHhcCCceeE
Q 006633 548 SIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-VDILVKIKSITDGMEWEGR 600 (637)
Q Consensus 548 ~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-~~~~~~~~~~~~~~~W~~~ 600 (637)
+.+.. ..+|-++-|+|||||.+++.+. .+....+.++.+...+++.
T Consensus 102 ~~~~~-------~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (178)
T 3hm2_A 102 GGLTA-------PGVFAAAWKRLPVGGRLVANAVTVESEQMLWALRKQFGGTIS 148 (178)
T ss_dssp C-TTC-------TTHHHHHHHTCCTTCEEEEEECSHHHHHHHHHHHHHHCCEEE
T ss_pred CcccH-------HHHHHHHHHhcCCCCEEEEEeeccccHHHHHHHHHHcCCeeE
Confidence 66643 6799999999999999999864 4556666666666666554
No 274
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.56 E-value=1.4e-07 Score=97.18 Aligned_cols=99 Identities=13% Similarity=0.127 Sum_probs=70.4
Q ss_pred CCCEEEEECCCCchHHHHHhhc----CCEEEEcCccccHHHHHHHHHHcC---------CCeEEEEeccccC-CCCCCCe
Q 006633 218 SIRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFALERG---------VPALIGVMASIRL-PYPSRAF 283 (637)
Q Consensus 218 ~~r~VLDIGCGtG~~a~~La~~----~v~~vdisp~Dls~a~i~~A~erg---------~~~~~~~~d~~~L-pfpd~sF 283 (637)
...+|||||||+|.++..+++. .+++++ +++.+++.|+++. ..+.+...|.... +..+++|
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vD-----id~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~f 152 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICE-----IDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTY 152 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEE-----SCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEE-----CCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCc
Confidence 3469999999999999999876 244454 4556666666542 3577887776542 2236789
Q ss_pred eEEEeccccccCCcC-CH--HHHHHHHHhcccCCeEEEEEeC
Q 006633 284 DMAHCSRCLIPWGQY-AD--GLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 284 DlV~~s~~L~h~~~~-d~--~~~L~ei~RvLKPGG~Lvls~p 322 (637)
|+|++.... ++... .. ..+++++.++|||||.+++...
T Consensus 153 D~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 153 DVIIVDSSD-PIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEEEEECCC-TTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred eEEEEcCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 999985433 44321 11 6899999999999999999853
No 275
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.56 E-value=3.2e-08 Score=100.98 Aligned_cols=103 Identities=8% Similarity=0.112 Sum_probs=73.7
Q ss_pred ceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----cccchhhccccccCCCC-Cccceeeeccccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMSTYP-RTYDLIHADSIFS 551 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl~~~~~~wce~~~~yp-~t~Dl~H~~~lfs 551 (637)
..+|||+|||+|.++.+|++. +---.+|+.+|.++.+++.+.+| |+..-+.-.|..+..+| ..||+|.+..++.
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~~l~ 150 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQ 150 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEESCGG
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeeeeee
Confidence 468999999999999888754 10112567788888999998876 44322222345566676 7799998876655
Q ss_pred cCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006633 552 LYKDRCEMEDVLLEMDRILRPEGSVIIRDD 581 (637)
Q Consensus 552 ~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 581 (637)
... .-+...+|-|+-|+|||||.+|++|.
T Consensus 151 ~~~-~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 151 FLE-PSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp GSC-HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ecC-chhHhHHHHHHHHHcCCCcEEEEEec
Confidence 432 22346799999999999999999863
No 276
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.55 E-value=1.3e-07 Score=94.27 Aligned_cols=95 Identities=19% Similarity=0.300 Sum_probs=72.8
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhc--c---cchhh-ccccccCCCC-Cccceeeeccc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG--L---IGTYQ-NWCEAMSTYP-RTYDLIHADSI 549 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg--l---~~~~~-~wce~~~~yp-~t~Dl~H~~~l 549 (637)
...+|||+|||.|.++..|++.+. +|+.+|.++.++..+.++- . +-..+ |+ +.++ +| .+||+|++..+
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~~-~~~~~fD~v~~~~~ 113 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIARGY---RYIALDADAAMLEVFRQKIAGVDRKVQVVQADA-RAIP-LPDESVHGVIVVHL 113 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTTTC---EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCT-TSCC-SCTTCEEEEEEESC
T ss_pred CCCEEEEeCCcCCHHHHHHHHCCC---EEEEEECCHHHHHHHHHHhhccCCceEEEEccc-ccCC-CCCCCeeEEEECCc
Confidence 467899999999999999998853 6777788878999888872 1 22222 22 2232 44 79999999877
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEE
Q 006633 550 FSLYKDRCEMEDVLLEMDRILRPEGSVIIR 579 (637)
Q Consensus 550 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~ 579 (637)
|.... +.+.+|-|+-|+|||||.+++.
T Consensus 114 l~~~~---~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 114 WHLVP---DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp GGGCT---THHHHHHHHHHHEEEEEEEEEE
T ss_pred hhhcC---CHHHHHHHHHHHCCCCcEEEEE
Confidence 76554 5689999999999999999986
No 277
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.55 E-value=1.5e-07 Score=92.10 Aligned_cols=113 Identities=11% Similarity=0.047 Sum_probs=79.7
Q ss_pred CCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----ccc---chhh-ccccccCCCCCccceeeec
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GLI---GTYQ-NWCEAMSTYPRTYDLIHAD 547 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl~---~~~~-~wce~~~~yp~t~Dl~H~~ 547 (637)
....+|||+|||+|.++.+|++.+ ..|+.+|.++.++..+.++ |+- .+++ |..+.+.. ...||+|-++
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~-~~~~D~v~~~ 129 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLAG---GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD-LPLPEAVFIG 129 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT-SCCCSEEEEC
T ss_pred CCCCEEEEecCCCCHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc-CCCCCEEEEC
Confidence 346789999999999999998773 3567777777888887765 443 2222 21121211 2479998875
Q ss_pred cccccCCCCcCHHHHHHHHhhcccCCcEEEEEe-CHHHHHHHHHHHhcCCceeE
Q 006633 548 SIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD-DVDILVKIKSITDGMEWEGR 600 (637)
Q Consensus 548 ~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d-~~~~~~~~~~~~~~~~W~~~ 600 (637)
+.+ +.+ +|-++-|+|||||.+++.. ..+....+.+.++...+++.
T Consensus 130 ~~~-------~~~-~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~g~~i~ 175 (204)
T 3njr_A 130 GGG-------SQA-LYDRLWEWLAPGTRIVANAVTLESETLLTQLHARHGGQLL 175 (204)
T ss_dssp SCC-------CHH-HHHHHHHHSCTTCEEEEEECSHHHHHHHHHHHHHHCSEEE
T ss_pred Ccc-------cHH-HHHHHHHhcCCCcEEEEEecCcccHHHHHHHHHhCCCcEE
Confidence 522 456 9999999999999999975 45677777777777666655
No 278
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.55 E-value=4.5e-08 Score=98.68 Aligned_cols=98 Identities=21% Similarity=0.274 Sum_probs=72.3
Q ss_pred CCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----ccc---chhh-ccccccCCCC-Cccceeee
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GLI---GTYQ-NWCEAMSTYP-RTYDLIHA 546 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl~---~~~~-~wce~~~~yp-~t~Dl~H~ 546 (637)
....+|||+|||.|.++..|++.. ..+|+.+|.++.++..+.++ |+- .+.+ |.. .+ ++| .+||+|.+
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~-~~~~~~fD~v~~ 135 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAM-DL-PFEDASFDAVWA 135 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT-SC-CSCTTCEEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccc-cC-CCCCCCccEEEE
Confidence 346799999999999999997641 13666777777788877765 542 2222 221 22 344 79999999
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 547 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 547 ~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
.++|.... +.+.+|-|+-|+|||||.+++.+
T Consensus 136 ~~~l~~~~---~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 136 LESLHHMP---DRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp ESCTTTSS---CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred echhhhCC---CHHHHHHHHHHHcCCCeEEEEEE
Confidence 88887554 35899999999999999999985
No 279
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.55 E-value=5.3e-08 Score=99.21 Aligned_cols=118 Identities=18% Similarity=0.195 Sum_probs=83.4
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc-cchhh-ccccccCCCCCccceeeeccccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQ-NWCEAMSTYPRTYDLIHADSIFS 551 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-~~~~~-~wce~~~~yp~t~Dl~H~~~lfs 551 (637)
..+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++ |+ +-+++ |.. .+.. +.+||+|.+..+|.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~-~~~~-~~~fD~i~~~~~~~ 195 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGY---DVTSWDHNENSIAFLNETKEKENLNISTALYDIN-AANI-QENYDFIVSTVVFM 195 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGG-GCCC-CSCEEEEEECSSGG
T ss_pred CCcEEEECCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccc-cccc-cCCccEEEEccchh
Confidence 56899999999999999998865 677778877788777665 43 22222 221 1222 68999999998887
Q ss_pred cCCCCcCHHHHHHHHhhcccCCcEEEEEeCH--------------HHHHHHHHHHhcCCceeEEec
Q 006633 552 LYKDRCEMEDVLLEMDRILRPEGSVIIRDDV--------------DILVKIKSITDGMEWEGRIAD 603 (637)
Q Consensus 552 ~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~--------------~~~~~~~~~~~~~~W~~~~~~ 603 (637)
.. +.-.+..+|-++-|+|||||.++|.... -....++++... |++..++
T Consensus 196 ~~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~ 258 (286)
T 3m70_A 196 FL-NRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEYN 258 (286)
T ss_dssp GS-CGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEEE
T ss_pred hC-CHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEEE
Confidence 54 3346779999999999999998774211 013466676666 8876553
No 280
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.55 E-value=1.1e-07 Score=97.28 Aligned_cols=99 Identities=12% Similarity=0.095 Sum_probs=72.6
Q ss_pred CCceeEeeecccchhhhhhhcCC---CeEEEEeccCCCCcchhHHHHhh----cc-cchhh-ccccccCCCCCccceeee
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD---PLWVMNTVPVEAKINTLGVIYER----GL-IGTYQ-NWCEAMSTYPRTYDLIHA 546 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~---~v~~mnv~~~~~~~~~l~~~~eR----gl-~~~~~-~wce~~~~yp~t~Dl~H~ 546 (637)
....+|||+|||+|.++..|++. +. +|+.+|.++.++..+.++ ++ +-.+. |.. . .+++.+||+||+
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~-~-~~~~~~fD~v~~ 95 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGS---KYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT-E-IELNDKYDIAIC 95 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTC---EEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTT-T-CCCSSCEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEEcchh-h-cCcCCCeeEEEE
Confidence 34679999999999999999876 22 455667666777777665 11 22222 322 2 234789999999
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH
Q 006633 547 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV 582 (637)
Q Consensus 547 ~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~ 582 (637)
..++.... +.+.+|.++-|+|||||++++.+..
T Consensus 96 ~~~l~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 96 HAFLLHMT---TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp ESCGGGCS---SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CChhhcCC---CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 88877554 4589999999999999999988654
No 281
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.54 E-value=3.3e-07 Score=100.60 Aligned_cols=110 Identities=16% Similarity=0.127 Sum_probs=73.8
Q ss_pred HHHHhcccCCCCCEEEEECCCCchHHHHHhhc--C-CEEEEcCccccHHHHHHHHHHc----CC-CeEEEEeccccCC--
Q 006633 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--N-ILAVSFAPRDTHEAQVQFALER----GV-PALIGVMASIRLP-- 277 (637)
Q Consensus 208 L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~-v~~vdisp~Dls~a~i~~A~er----g~-~~~~~~~d~~~Lp-- 277 (637)
+..++...++. +|||+|||+|..+..|++. + ..++.+ |+++.+++.+.++ +. ++.+...|...++
T Consensus 251 ~~~~l~~~~g~--~VLDlgaG~G~~t~~la~~~~~~~~v~a~---D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~ 325 (450)
T 2yxl_A 251 ASIVLDPKPGE--TVVDLAAAPGGKTTHLAELMKNKGKIYAF---DVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEI 325 (450)
T ss_dssp HHHHHCCCTTC--EEEESSCTTCHHHHHHHHHTTTCSEEEEE---CSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSS
T ss_pred HHHhcCCCCcC--EEEEeCCCccHHHHHHHHHcCCCCEEEEE---cCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchh
Confidence 44455555544 9999999999999999874 2 334444 4444454444332 54 5788888887776
Q ss_pred CCCCCeeEEEe------ccccccCC-------cCCH-------HHHHHHHHhcccCCeEEEEEeC
Q 006633 278 YPSRAFDMAHC------SRCLIPWG-------QYAD-------GLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 278 fpd~sFDlV~~------s~~L~h~~-------~~d~-------~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+++++||+|++ ..++.+.+ +++. ..++.++.++|||||.+++++.
T Consensus 326 ~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 326 IGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp SCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred hccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 56688999996 22222211 1011 5789999999999999999875
No 282
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.54 E-value=5.2e-08 Score=98.54 Aligned_cols=98 Identities=15% Similarity=0.283 Sum_probs=71.8
Q ss_pred CCceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhh----cc--cchhh-ccccccCCCCCccceeee
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTYPRTYDLIHA 546 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~-~wce~~~~yp~t~Dl~H~ 546 (637)
....+|||+|||.|.++..|.+. +. .|+.+|.++.++..+.++ |+ +-... |. +.++.-+.+||+|++
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~ 111 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDA---EITSIDISPESLEKARENTEKNGIKNVKFLQANI-FSLPFEDSSFDHIFV 111 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCG-GGCCSCTTCEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEccc-ccCCCCCCCeeEEEE
Confidence 34679999999999999999876 33 556667776788877766 44 22222 22 222222489999999
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 547 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 547 ~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
..++.... +.+.+|-++.|+|||||++++.+
T Consensus 112 ~~~l~~~~---~~~~~l~~~~~~L~pgG~l~~~~ 142 (276)
T 3mgg_A 112 CFVLEHLQ---SPEEALKSLKKVLKPGGTITVIE 142 (276)
T ss_dssp ESCGGGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred echhhhcC---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 88877554 45799999999999999999975
No 283
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.54 E-value=3.1e-07 Score=90.61 Aligned_cols=121 Identities=14% Similarity=0.068 Sum_probs=88.1
Q ss_pred eeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhc----ccchhhccccccCCC--CCccceeeecccccc
Q 006633 479 RNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG----LIGTYQNWCEAMSTY--PRTYDLIHADSIFSL 552 (637)
Q Consensus 479 r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg----l~~~~~~wce~~~~y--p~t~Dl~H~~~lfs~ 552 (637)
.+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++. +..-+.-.+..+..+ +.+||+|.+.++|..
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPER---FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCA 144 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTE---EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTT
T ss_pred CCEEEeCCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhc
Confidence 4999999999999999988754 5677788778888887764 212122222333333 379999999888875
Q ss_pred CCCCcCHHHHHHHHhhcccCCcEEEEEeCH-----------HHHHHHHHHHhcCCceeEEec
Q 006633 553 YKDRCEMEDVLLEMDRILRPEGSVIIRDDV-----------DILVKIKSITDGMEWEGRIAD 603 (637)
Q Consensus 553 ~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~-----------~~~~~~~~~~~~~~W~~~~~~ 603 (637)
.. .-+...+|-++-|+|||||++++.+-. -....+.++++...|+....+
T Consensus 145 ~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 205 (235)
T 3lcc_A 145 IE-PEMRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVE 205 (235)
T ss_dssp SC-GGGHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEE
T ss_pred CC-HHHHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEE
Confidence 53 346689999999999999999986421 134678888888888876443
No 284
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.53 E-value=1.8e-07 Score=91.93 Aligned_cols=138 Identities=14% Similarity=0.043 Sum_probs=95.2
Q ss_pred ceeEeeeccc-chhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc-cchhh-ccccccCCCC-Cccceeeeccc
Q 006633 478 YRNLLDMNAY-LGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQ-NWCEAMSTYP-RTYDLIHADSI 549 (637)
Q Consensus 478 ~r~vlD~~~g-~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-~~~~~-~wce~~~~yp-~t~Dl~H~~~l 549 (637)
..+|||+||| .|.++.+|++.. ..+|+.+|.++.++..+.++ |+ +.+++ |+ +.+..+| .+||+|-++-.
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNG-GIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS-CSSTTTCCSCEEEEEECCC
T ss_pred CCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc-hhhhhcccCceeEEEECCC
Confidence 5789999999 999999988762 23567777777788777654 43 23333 21 2355565 89999998755
Q ss_pred cccCC----------------CCcCHHHHHHHHhhcccCCcEEEEE--eCHHHHHHHHHHHhcCCceeEEeccCCCCCCc
Q 006633 550 FSLYK----------------DRCEMEDVLLEMDRILRPEGSVIIR--DDVDILVKIKSITDGMEWEGRIADHENGPRQR 611 (637)
Q Consensus 550 fs~~~----------------~~c~~~~~l~e~dRiLrPgG~~i~~--d~~~~~~~~~~~~~~~~W~~~~~~~e~~~~~~ 611 (637)
|.... ....+..+|-++-|+|||||.+++. ...+....+.+.++...|++.......|. ..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~g~-~~ 211 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKEKLLNVIKERGIKLGYSVKDIKFKVGT-RW 211 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCHHHHHHHHHHHHHTTCEEEEEEECCCC--C
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccHhHHHHHHHHHHHcCCceEEEEecCCC-eE
Confidence 53211 1122478999999999999999984 34467788888889999988876555443 34
Q ss_pred ceEEEEEe
Q 006633 612 EKILFANK 619 (637)
Q Consensus 612 ~~~l~~~K 619 (637)
-.+|+.+|
T Consensus 212 ~~~l~f~~ 219 (230)
T 3evz_A 212 RHSLIFFK 219 (230)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 55666665
No 285
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.53 E-value=1.3e-07 Score=92.33 Aligned_cols=100 Identities=14% Similarity=0.233 Sum_probs=73.5
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc-cch-------hhccccccCC--C-CCccceeee
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IGT-------YQNWCEAMST--Y-PRTYDLIHA 546 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-~~~-------~~~wce~~~~--y-p~t~Dl~H~ 546 (637)
..+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++.- .+. +.-.+..+.. + +.+||+|.+
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASKGY---SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 56899999999999999988854 67777877788888877432 010 1111222222 3 389999999
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 547 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 547 ~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
..++....+.-....+|-++-|+|||||.+++.+
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 8888766655444589999999999999999975
No 286
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.52 E-value=9.7e-08 Score=98.13 Aligned_cols=95 Identities=13% Similarity=0.111 Sum_probs=70.7
Q ss_pred CCceeEeeecccchhhhhhhcC---CCeEEEEeccCCCCcchhHHHHhh-----cccc---hhh-ccccccCCCC-----
Q 006633 476 GRYRNLLDMNAYLGGFAAALVD---DPLWVMNTVPVEAKINTLGVIYER-----GLIG---TYQ-NWCEAMSTYP----- 538 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~---~~v~~mnv~~~~~~~~~l~~~~eR-----gl~~---~~~-~wce~~~~yp----- 538 (637)
....+|||+|||.|.++..|++ .. .+|+.+|.++.++..+.++ |... .++ |. +.++.-.
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~-~~~~~~~~~~~~ 110 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPF---EQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSS-DDFKFLGADSVD 110 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCC---SEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCT-TCCGGGCTTTTT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCC---CEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCH-HhCCcccccccc
Confidence 3478999999999999999984 43 3667778887888888876 3322 222 22 2222112
Q ss_pred -CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEE
Q 006633 539 -RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVII 578 (637)
Q Consensus 539 -~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~ 578 (637)
.+||+|++..++... +...+|-++.|+|||||.+++
T Consensus 111 ~~~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 111 KQKIDMITAVECAHWF----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp SSCEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCeeEEeHhhHHHHh----CHHHHHHHHHHhcCCCcEEEE
Confidence 699999998777654 789999999999999999998
No 287
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.52 E-value=1.8e-07 Score=96.29 Aligned_cols=96 Identities=14% Similarity=0.185 Sum_probs=66.8
Q ss_pred CCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHc---------------CCCeEEEEecccc-CCCC
Q 006633 219 IRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALER---------------GVPALIGVMASIR-LPYP 279 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~er---------------g~~~~~~~~d~~~-Lpfp 279 (637)
..+|||||||+|.++..+++++ ++++|++ +.+++.|+++ ...+.+...|... ++.
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid-----~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~- 149 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDVDEVIMVEID-----EDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN- 149 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCCSEEEEEESC-----HHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-
T ss_pred CCeEEEEcCCcCHHHHHHHhCCCCEEEEEECC-----HHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-
Confidence 4599999999999999999873 4555554 4555555433 2346777777543 222
Q ss_pred CCCeeEEEeccccccCCcC-C--HHHHHHHHHhcccCCeEEEEEe
Q 006633 280 SRAFDMAHCSRCLIPWGQY-A--DGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 280 d~sFDlV~~s~~L~h~~~~-d--~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+++||+|++.... ++... . ...+++++.++|||||.+++..
T Consensus 150 ~~~fD~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 150 NRGFDVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp CCCEEEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCeeEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 5789999986543 33210 1 3678999999999999999974
No 288
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.51 E-value=1.2e-07 Score=94.43 Aligned_cols=114 Identities=18% Similarity=0.254 Sum_probs=76.7
Q ss_pred HHHHHHHHhhhccCCCCCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc-cchhh-ccccc
Q 006633 460 KRVTYYKSVDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQ-NWCEA 533 (637)
Q Consensus 460 ~~v~~y~~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-~~~~~-~wce~ 533 (637)
..+.....++..+.. ....+|||+|||.|.++..|++.+. +|+.+|.++.++..+.++ |+ +..++ |..+
T Consensus 25 ~~~~~~~~~~~~~~~-~~~~~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~- 99 (252)
T 1wzn_A 25 AEIDFVEEIFKEDAK-REVRRVLDLACGTGIPTLELAERGY---EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE- 99 (252)
T ss_dssp HHHHHHHHHHHHTCS-SCCCEEEEETCTTCHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG-
T ss_pred HHHHHHHHHHHHhcc-cCCCEEEEeCCCCCHHHHHHHHCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh-
Confidence 334444444444333 3457999999999999999998865 677788887888888765 33 22222 2222
Q ss_pred cCCCCCccceeeecc-ccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 534 MSTYPRTYDLIHADS-IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 534 ~~~yp~t~Dl~H~~~-lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
+ .++.+||+|.+.. .+. +.+.-+...+|-++-|+|+|||.+++.-
T Consensus 100 ~-~~~~~fD~v~~~~~~~~-~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 100 I-AFKNEFDAVTMFFSTIM-YFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp C-CCCSCEEEEEECSSGGG-GSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c-ccCCCccEEEEcCCchh-cCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 1 2458899998742 222 2233356789999999999999999863
No 289
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.51 E-value=5.1e-08 Score=96.80 Aligned_cols=103 Identities=15% Similarity=0.155 Sum_probs=72.7
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc-----cchhh-ccccccCCCC-Cccceeeec-c
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-----IGTYQ-NWCEAMSTYP-RTYDLIHAD-S 548 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-----~~~~~-~wce~~~~yp-~t~Dl~H~~-~ 548 (637)
...+|||+|||+|.++.+|.+.+. -+|+.+|.++.++..+.++.- +-+++ |+.+-..++| .+||+|.++ .
T Consensus 60 ~~~~vLDiGcGtG~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~ 137 (236)
T 1zx0_A 60 KGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY 137 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHHTSCE--EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred CCCeEEEEeccCCHHHHHHHhcCC--CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence 357899999999999999988654 377788888899999888652 22222 3333233565 899999883 1
Q ss_pred ccc-cCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006633 549 IFS-LYKDRCEMEDVLLEMDRILRPEGSVIIRDD 581 (637)
Q Consensus 549 lfs-~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 581 (637)
.++ ...+.-..+.+|-|+-|+|||||.+++.+.
T Consensus 138 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred ccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 111 111233345789999999999999998753
No 290
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.51 E-value=9.4e-08 Score=96.43 Aligned_cols=97 Identities=21% Similarity=0.352 Sum_probs=72.6
Q ss_pred CCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcccchhhccccccCCCC-CccceeeeccccccCC
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMSTYP-RTYDLIHADSIFSLYK 554 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~~wce~~~~yp-~t~Dl~H~~~lfs~~~ 554 (637)
....+|||+|||+|.++..|++.+. +|+.+|.++.++..+.++.-+..++.=.+.++ +| .+||+||+.+++...
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~-~~~~~fD~v~~~~~l~~~- 107 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQGL---FVYAVEPSIVMRQQAVVHPQVEWFTGYAENLA-LPDKSVDGVISILAIHHF- 107 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTTC---EEEEECSCHHHHHSSCCCTTEEEECCCTTSCC-SCTTCBSEEEEESCGGGC-
T ss_pred CCCCEEEEEcCcccHHHHHHHhCCC---EEEEEeCCHHHHHHHHhccCCEEEECchhhCC-CCCCCEeEEEEcchHhhc-
Confidence 3467999999999999999998654 66777777677776666643333332223333 54 899999998887655
Q ss_pred CCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 555 DRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 555 ~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
-+.+.+|-|+-|+|| ||++++.+
T Consensus 108 --~~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 108 --SHLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp --SSHHHHHHHHHHHBC-SSCEEEEE
T ss_pred --cCHHHHHHHHHHHhC-CcEEEEEE
Confidence 456899999999999 99888764
No 291
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.51 E-value=5.9e-08 Score=99.66 Aligned_cols=101 Identities=15% Similarity=0.202 Sum_probs=69.8
Q ss_pred CCceeEeeecccchhhhhh----hcC--CCeEEEEeccCCCCcchhHHHHhh-----cccchhhccc----cccC-----
Q 006633 476 GRYRNLLDMNAYLGGFAAA----LVD--DPLWVMNTVPVEAKINTLGVIYER-----GLIGTYQNWC----EAMS----- 535 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~----l~~--~~v~~mnv~~~~~~~~~l~~~~eR-----gl~~~~~~wc----e~~~----- 535 (637)
....+|||+|||+|.++.. |.. ..+ ...++.+|.+..++..+.++ |+-.+--.|. +.+.
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~-~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGV-CINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTC-EEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCc-eeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 3466899999999986643 322 233 23457778888999988876 3311111121 2232
Q ss_pred CCC-CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 536 TYP-RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 536 ~yp-~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
.++ .+||+|++..++-... +.+..|-||-|+|||||++++..
T Consensus 130 ~~~~~~fD~V~~~~~l~~~~---d~~~~l~~~~r~LkpgG~l~i~~ 172 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYVK---DIPATLKFFHSLLGTNAKMLIIV 172 (292)
T ss_dssp TTCCCCEEEEEEESCGGGCS---CHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCCCceeEEEEeeeeeecC---CHHHHHHHHHHHcCCCcEEEEEE
Confidence 243 8999999977776554 46899999999999999999963
No 292
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.51 E-value=4.3e-07 Score=97.75 Aligned_cols=104 Identities=13% Similarity=0.056 Sum_probs=71.9
Q ss_pred CCEEEEECCCCchHHHHHhhc---CCEEEEcCccccHHHHHHHHHHcCC---CeEEEEecccc-CCC---CCCCeeEEEe
Q 006633 219 IRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALERGV---PALIGVMASIR-LPY---PSRAFDMAHC 288 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~---~v~~vdisp~Dls~a~i~~A~erg~---~~~~~~~d~~~-Lpf---pd~sFDlV~~ 288 (637)
+.+|||+|||+|.++..+++. .|+++|+++..+..+..+. ..++. ++.+..+|+.. ++. ...+||+|++
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~-~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~ 291 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHF-EANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIII 291 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHH-HHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH-HHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEE
Confidence 348999999999999999986 3677888776665554433 33444 57888888654 221 2458999998
Q ss_pred ccccc-----cCCc--CCHHHHHHHHHhcccCCeEEEEEeCC
Q 006633 289 SRCLI-----PWGQ--YADGLYLIEVDRVLRPGGYWILSGPP 323 (637)
Q Consensus 289 s~~L~-----h~~~--~d~~~~L~ei~RvLKPGG~Lvls~pp 323 (637)
..-.. .... .+...++.++.++|+|||.++++..+
T Consensus 292 DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 292 DPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp CCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 54331 1111 03345778889999999999998753
No 293
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.51 E-value=8.5e-08 Score=94.50 Aligned_cols=99 Identities=12% Similarity=0.217 Sum_probs=74.3
Q ss_pred CCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc---cchhh-ccccccCCCC-Cccceeeecccc
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL---IGTYQ-NWCEAMSTYP-RTYDLIHADSIF 550 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl---~~~~~-~wce~~~~yp-~t~Dl~H~~~lf 550 (637)
....+|||+|||.|.++.+|++.+. -+|+.+|.++.++..+.++.- +...+ |. +.++ +| .+||+|.+..++
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~-~~~~-~~~~~fD~v~~~~~l 117 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGA--SYVLGLDLSEKMLARARAAGPDTGITYERADL-DKLH-LPQDSFDLAYSSLAL 117 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHTSCSSSEEEEECCG-GGCC-CCTTCEEEEEEESCG
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHhcccCCceEEEcCh-hhcc-CCCCCceEEEEeccc
Confidence 3467899999999999999988754 156666777788888888753 22222 22 2232 44 899999998877
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006633 551 SLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 581 (637)
Q Consensus 551 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 581 (637)
.... +...+|-++-|+|||||.+++.+.
T Consensus 118 ~~~~---~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 118 HYVE---DVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp GGCS---CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccc---hHHHHHHHHHHhcCcCcEEEEEeC
Confidence 6553 568999999999999999999753
No 294
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.51 E-value=1.3e-07 Score=93.17 Aligned_cols=101 Identities=19% Similarity=0.191 Sum_probs=72.1
Q ss_pred CCceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhhcc-cchhhccccccCCC--CCccceeeecccc
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYERGL-IGTYQNWCEAMSTY--PRTYDLIHADSIF 550 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eRgl-~~~~~~wce~~~~y--p~t~Dl~H~~~lf 550 (637)
....+|||+|||.|.++.+|++. +. +|+.+|.++.++..+.++-- .+-+.-.+..+..+ +.+||+|.+..++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l 119 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEA---TFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSI 119 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTC---EEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCC---eEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEEeCcc
Confidence 44689999999999999999876 32 56667777788888887721 11111122333333 3899999998877
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 551 SLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 551 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
....+ -....+|-|+-|+|||||.+++.+
T Consensus 120 ~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 120 HHLED-EDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp GGSCH-HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCH-HHHHHHHHHHHHhcCCCcEEEEEE
Confidence 75532 123469999999999999999986
No 295
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.51 E-value=2.2e-07 Score=92.89 Aligned_cols=92 Identities=13% Similarity=0.130 Sum_probs=65.7
Q ss_pred CEEEEECCCCchHHHHHhhc---C--CEEEEcCccccHHHHHHHHH----HcCC--CeEEEEeccccC-C-C-----CCC
Q 006633 220 RTAIDTGCGVASWGAYLMSR---N--ILAVSFAPRDTHEAQVQFAL----ERGV--PALIGVMASIRL-P-Y-----PSR 281 (637)
Q Consensus 220 r~VLDIGCGtG~~a~~La~~---~--v~~vdisp~Dls~a~i~~A~----erg~--~~~~~~~d~~~L-p-f-----pd~ 281 (637)
++|||||||+|..+..|++. + ++++|++ +.+++.|+ +.+. .+.+..++.... + + +++
T Consensus 72 ~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~-----~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 72 KKTIEVGVFTGYSLLLTALSIPDDGKITAIDFD-----REAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEG 146 (237)
T ss_dssp CEEEEECCTTSHHHHHHHHHSCTTCEEEEEESC-----HHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTT
T ss_pred CEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECC-----HHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCC
Confidence 48999999999999999875 3 4555554 44444443 2344 367777776442 2 2 257
Q ss_pred CeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 282 AFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 282 sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+||+|++.. ... +...+++++.++|||||.+++..
T Consensus 147 ~fD~I~~d~----~~~-~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 147 SYDFGFVDA----DKP-NYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp CEEEEEECS----CGG-GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CcCEEEECC----chH-HHHHHHHHHHHhcCCCeEEEEec
Confidence 899999853 233 67789999999999999999874
No 296
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.51 E-value=2.1e-07 Score=89.84 Aligned_cols=129 Identities=9% Similarity=0.082 Sum_probs=85.2
Q ss_pred ceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----cc--cchhhccccccCCC--CCccceeeecc
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL--IGTYQNWCEAMSTY--PRTYDLIHADS 548 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~~wce~~~~y--p~t~Dl~H~~~ 548 (637)
..+|||+|||.|.++.+|+.. +- .+|+.+|.++.++..+.++ |+ +-+++ ..+..+ +.+||+|.+++
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~---~d~~~~~~~~~~D~i~~~~ 140 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPE--AHFTLLDSLGKRVRFLRQVQHELKLENIEPVQ---SRVEEFPSEPPFDGVISRA 140 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTT--SEEEEEESCHHHHHHHHHHHHHTTCSSEEEEE---CCTTTSCCCSCEEEEECSC
T ss_pred CCeEEEECCCCCHHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEe---cchhhCCccCCcCEEEEec
Confidence 358999999999999998764 22 2556667666777777654 54 23332 222233 27899999854
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCHHHHHHHHHHHhcCCceeEEec--cCCCCCCcceEEEEEec
Q 006633 549 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDVDILVKIKSITDGMEWEGRIAD--HENGPRQREKILFANKK 620 (637)
Q Consensus 549 lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~~~~~~~~~~~~~~W~~~~~~--~e~~~~~~~~~l~~~K~ 620 (637)
+ ..++.++-++-|+|+|||++++......-..++++.+ .|+..... .-........+++++|+
T Consensus 141 ~-------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~k~ 205 (207)
T 1jsx_A 141 F-------ASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPE--EYQVESVVKLQVPALDGERHLVVIKAN 205 (207)
T ss_dssp S-------SSHHHHHHHHTTSEEEEEEEEEEESSCCHHHHHTSCT--TEEEEEEEEEECC--CCEEEEEEEEEC
T ss_pred c-------CCHHHHHHHHHHhcCCCcEEEEEeCCCchHHHHHHhc--CCceeeeeeeccCCCCCceEEEEEEec
Confidence 3 4568999999999999999999866555566666665 67654311 11112235677777764
No 297
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.50 E-value=1.2e-07 Score=98.79 Aligned_cols=132 Identities=11% Similarity=0.081 Sum_probs=85.7
Q ss_pred CCceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----cccchhhccccccCCCC-Cccceeeeccc
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMSTYP-RTYDLIHADSI 549 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl~~~~~~wce~~~~yp-~t~Dl~H~~~l 549 (637)
....+|||+|||.|++++.++.+ + .-.|+.+|.++.++..+.++ |+ .-+.-.+.....+| .+||+|.+.++
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~--ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~d~~FDvV~~~a~ 197 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVY--GMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVIDGLEFDVLMVAAL 197 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTT--CCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGGGCCCSEEEECTT
T ss_pred CCcCEEEEECCCccHHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCCCCCcCEEEECCC
Confidence 34789999999999988665432 1 13566667777888888776 66 32222233334455 89999987443
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEeCHHH---H-HHH-HHHHhcCCceeEEeccCCCCCCcceEEEEEe
Q 006633 550 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDVDI---L-VKI-KSITDGMEWEGRIADHENGPRQREKILFANK 619 (637)
Q Consensus 550 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~~---~-~~~-~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~K 619 (637)
.-+.+.++-|+-|+|||||.+++++.... + ..+ ....+ .|+.....+-.+. ....|.+++|
T Consensus 198 ------~~d~~~~l~el~r~LkPGG~Lvv~~~~~~r~~l~~~v~~~~~~--gf~~~~~~~p~~~-v~N~vv~a~k 263 (298)
T 3fpf_A 198 ------AEPKRRVFRNIHRYVDTETRIIYRTYTGMRAILYAPVSDDDIT--GFRRAGVVLPSGK-VNNTSVLVFK 263 (298)
T ss_dssp ------CSCHHHHHHHHHHHCCTTCEEEEEECCGGGGGSSCCCCTGGGT--TEEEEEEECCCTT-CCCEEEEEEE
T ss_pred ------ccCHHHHHHHHHHHcCCCcEEEEEcCcchhhhccccCChhhhh--hhhheeEECCCCC-cCcEEEEEEc
Confidence 24668999999999999999999974321 0 001 11223 5666654444332 3467888888
No 298
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.50 E-value=2.6e-07 Score=90.03 Aligned_cols=104 Identities=14% Similarity=0.201 Sum_probs=72.2
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cccc----hhhccccccC--CCC-Cccceeee
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GLIG----TYQNWCEAMS--TYP-RTYDLIHA 546 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl~~----~~~~wce~~~--~yp-~t~Dl~H~ 546 (637)
..+|||+|||.|.++.+|++..- ..+|+.+|.++.++..+.++ |+-. -+.-.+..+. ..+ .+||+|.+
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 108 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATV 108 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEee
Confidence 56999999999999999987521 02566677777888888776 2210 1111112222 222 79999999
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCHH
Q 006633 547 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDVD 583 (637)
Q Consensus 547 ~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~ 583 (637)
..+|.... .-++..+|-++-|+|||||.+++.+..+
T Consensus 109 ~~~l~~~~-~~~~~~~l~~~~~~LkpgG~li~~~~~~ 144 (217)
T 3jwh_A 109 IEVIEHLD-LSRLGAFERVLFEFAQPKIVIVTTPNIE 144 (217)
T ss_dssp ESCGGGCC-HHHHHHHHHHHHTTTCCSEEEEEEEBHH
T ss_pred HHHHHcCC-HHHHHHHHHHHHHHcCCCEEEEEccCcc
Confidence 88887552 2345789999999999999999886543
No 299
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.50 E-value=3.2e-07 Score=90.37 Aligned_cols=95 Identities=15% Similarity=0.284 Sum_probs=71.8
Q ss_pred eeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc-----cchhh-ccccccCCCCCccceeeecc-ccc
Q 006633 479 RNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-----IGTYQ-NWCEAMSTYPRTYDLIHADS-IFS 551 (637)
Q Consensus 479 r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-----~~~~~-~wce~~~~yp~t~Dl~H~~~-lfs 551 (637)
.+|||+|||.|.++..|++. .+|+.+|.++.++..+.++.- +...+ |..+ + ++|.+||+|.+.. ++.
T Consensus 35 ~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~-~~~~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 35 KRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRE-L-ELPEPVDAITILCDSLN 108 (243)
T ss_dssp CEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGG-C-CCSSCEEEEEECTTGGG
T ss_pred CeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhh-c-CCCCCcCEEEEeCCchh
Confidence 78999999999999999887 477788888788888877631 22222 2211 1 2458999999865 666
Q ss_pred cCCCCcCHHHHHHHHhhcccCCcEEEEE
Q 006633 552 LYKDRCEMEDVLLEMDRILRPEGSVIIR 579 (637)
Q Consensus 552 ~~~~~c~~~~~l~e~dRiLrPgG~~i~~ 579 (637)
...+.-+...+|-++-|+|||||.+++.
T Consensus 109 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 109 YLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp GCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 5555556778999999999999999984
No 300
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.50 E-value=5.5e-08 Score=93.74 Aligned_cols=135 Identities=14% Similarity=0.151 Sum_probs=88.2
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc----cchhh-ccccccCCCC-Cccceeeeccccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL----IGTYQ-NWCEAMSTYP-RTYDLIHADSIFS 551 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl----~~~~~-~wce~~~~yp-~t~Dl~H~~~lfs 551 (637)
..+|||+|||.|.++..|++.+.- +|+.+|.++.++..+.++.- +-+.+ |.. .+ +++ .+||+|.+.++|.
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~-~~-~~~~~~fD~v~~~~~~~ 118 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFP--NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVR-KL-DFPSASFDVVLEKGTLD 118 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCC--CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTT-SC-CSCSSCEEEEEEESHHH
T ss_pred CCeEEEECCCCcHHHHHHHHcCCC--cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchh-cC-CCCCCcccEEEECcchh
Confidence 568999999999999999877532 56666777778888877631 22222 222 22 344 7999999988875
Q ss_pred cCC------------CCcCHHHHHHHHhhcccCCcEEEEEeCHHHHHHHHHH--HhcCCceeEEeccCCCCCCcceEEEE
Q 006633 552 LYK------------DRCEMEDVLLEMDRILRPEGSVIIRDDVDILVKIKSI--TDGMEWEGRIADHENGPRQREKILFA 617 (637)
Q Consensus 552 ~~~------------~~c~~~~~l~e~dRiLrPgG~~i~~d~~~~~~~~~~~--~~~~~W~~~~~~~e~~~~~~~~~l~~ 617 (637)
... +.-+...+|-|+-|+|||||.+++.+....-. ...+ .....|.......+++. .-.+.++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 195 (215)
T 2pxx_A 119 ALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPHF-RTRHYAQAYYGWSLRHATYGSGF--HFHLYLM 195 (215)
T ss_dssp HHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHHH-HHHHHCCGGGCEEEEEEEESGGG--CEEEEEE
T ss_pred hhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcHH-HHHHHhccccCcEEEEEEecCcc--eEEEEEE
Confidence 332 12245789999999999999999987543211 1222 34456876654443332 3456666
Q ss_pred Ee
Q 006633 618 NK 619 (637)
Q Consensus 618 ~K 619 (637)
+|
T Consensus 196 ~~ 197 (215)
T 2pxx_A 196 HK 197 (215)
T ss_dssp EE
T ss_pred Ee
Confidence 66
No 301
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.50 E-value=4.8e-07 Score=90.94 Aligned_cols=130 Identities=10% Similarity=0.049 Sum_probs=88.0
Q ss_pred HHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC----CEEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccCC
Q 006633 204 YIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN----ILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRLP 277 (637)
Q Consensus 204 ~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~----v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~Lp 277 (637)
.++.+.++++ ++ .+|||||||+|.++..|++.+ ++++|+++..+..+..+. ...+. .+.+..+|.....
T Consensus 11 RL~~i~~~v~--~g--~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~-~~~gl~~~I~~~~gD~l~~~ 85 (230)
T 3lec_A 11 RLQKVANYVP--KG--ARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNV-SEHGLTSKIDVRLANGLSAF 85 (230)
T ss_dssp HHHHHHTTSC--TT--EEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHH-HHTTCTTTEEEEECSGGGGC
T ss_pred HHHHHHHhCC--CC--CEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCCcEEEEECchhhcc
Confidence 3445555553 33 489999999999999999874 566766554444333332 23344 4788888877766
Q ss_pred CCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHhcee
Q 006633 278 YPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWK 357 (637)
Q Consensus 278 fpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w~ 357 (637)
.++..||+|+.....-. -...++.+..+.|+++|+|+++.. .. ...+.+.....+|.
T Consensus 86 ~~~~~~D~IviaGmGg~----lI~~IL~~~~~~l~~~~~lIlqp~------------~~-------~~~lr~~L~~~Gf~ 142 (230)
T 3lec_A 86 EEADNIDTITICGMGGR----LIADILNNDIDKLQHVKTLVLQPN------------NR-------EDDLRKWLAANDFE 142 (230)
T ss_dssp CGGGCCCEEEEEEECHH----HHHHHHHHTGGGGTTCCEEEEEES------------SC-------HHHHHHHHHHTTEE
T ss_pred ccccccCEEEEeCCchH----HHHHHHHHHHHHhCcCCEEEEECC------------CC-------hHHHHHHHHHCCCE
Confidence 55557999886554311 355688899999999999999853 11 23466777778887
Q ss_pred eecc
Q 006633 358 KLIQ 361 (637)
Q Consensus 358 ~v~~ 361 (637)
.+.+
T Consensus 143 i~~E 146 (230)
T 3lec_A 143 IVAE 146 (230)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 302
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.50 E-value=1.5e-07 Score=91.78 Aligned_cols=121 Identities=10% Similarity=0.065 Sum_probs=83.7
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhc-c--------------cchhhccccccCCCC----
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG-L--------------IGTYQNWCEAMSTYP---- 538 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg-l--------------~~~~~~wce~~~~yp---- 538 (637)
..+|||+|||.|.++.+|++++. .|+.+|.++.++..+.+|- + ..-+.-.|..+...|
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~g~---~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQGY---HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHHCC---EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred CCEEEEeCCCCcHhHHHHHHCCC---eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 56899999999999999998764 6888898889999998872 1 011112233444444
Q ss_pred CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcE-EEEE-eCH----------HHHHHHHHHHhcCCceeEEec
Q 006633 539 RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGS-VIIR-DDV----------DILVKIKSITDGMEWEGRIAD 603 (637)
Q Consensus 539 ~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~-~i~~-d~~----------~~~~~~~~~~~~~~W~~~~~~ 603 (637)
.+||+|-+.++|.... ..+.+.++-||-|+|||||. +++. +-. -..+.+++++.. .|++....
T Consensus 100 ~~fD~v~~~~~l~~l~-~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~~ 174 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALP-ADMRERYVQHLEALMPQACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKVG 174 (203)
T ss_dssp HSEEEEEEESCGGGSC-HHHHHHHHHHHHHHSCSEEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEEE
T ss_pred CCEEEEEECcchhhCC-HHHHHHHHHHHHHHcCCCcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEec
Confidence 6899999877775443 23456789999999999998 3333 210 024667777776 77766443
No 303
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.49 E-value=3e-07 Score=94.00 Aligned_cols=90 Identities=10% Similarity=0.028 Sum_probs=66.3
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc---------CCCeEEEEeccccCCCCCCCeeEEEec
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER---------GVPALIGVMASIRLPYPSRAFDMAHCS 289 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er---------g~~~~~~~~d~~~Lpfpd~sFDlV~~s 289 (637)
.++|||||||+|.++..+++++..++.+ |+++.+++.|++. ...+.+...|..... ++||+|++.
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~~~v~~v---eid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYDTHIDFV---QADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSSCEEEEE---CSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCEEEEEeCCcCHHHHHHHhCCCEEEEE---ECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 4699999999999999998764222233 5566666666543 234677777776554 789999986
Q ss_pred cccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 290 RCLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 290 ~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
. . ++..+++++.++|||||.+++..
T Consensus 147 ~-----~--dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 147 Q-----E--PDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp S-----C--CCHHHHHHHHTTEEEEEEEEEEE
T ss_pred C-----C--ChHHHHHHHHHhcCCCcEEEEEc
Confidence 2 2 45569999999999999999964
No 304
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.49 E-value=1.3e-07 Score=98.03 Aligned_cols=107 Identities=14% Similarity=0.094 Sum_probs=75.5
Q ss_pred HhhhccCCCCCceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----cccchhhccccccC--CCC-
Q 006633 467 SVDYQLAQPGRYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMS--TYP- 538 (637)
Q Consensus 467 ~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl~~~~~~wce~~~--~yp- 538 (637)
.++..+..-....+|||+|||.|.++..|+++ + ..|+.+|.++.++..+.++ |+-.-+.-.+..+. ++|
T Consensus 107 ~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~---~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 183 (312)
T 3vc1_A 107 FLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFG---SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDK 183 (312)
T ss_dssp HHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHC---CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCT
T ss_pred HHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcC---CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCC
Confidence 34444441145779999999999999999876 4 3566677777788877764 44211111122222 254
Q ss_pred CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 539 RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 539 ~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
.+||+|.+..+|... +.+.+|-|+.|+|||||.+++.+
T Consensus 184 ~~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 184 GAVTASWNNESTMYV----DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp TCEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEeEEEECCchhhC----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 899999998887755 28999999999999999999974
No 305
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.49 E-value=2.6e-07 Score=87.22 Aligned_cols=137 Identities=13% Similarity=0.100 Sum_probs=91.7
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc-cchhh-ccccccCCCC-Cccceeeec-cccccC
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IGTYQ-NWCEAMSTYP-RTYDLIHAD-SIFSLY 553 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-~~~~~-~wce~~~~yp-~t~Dl~H~~-~lfs~~ 553 (637)
..+|||+|||.|.++..|.+.+. +|+.+|.++.++..+.++.- +.+++ |..+ + .+| .+||+|.++ .++...
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~-~-~~~~~~~D~i~~~~~~~~~~ 121 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQGH---DVLGTDLDPILIDYAKQDFPEARWVVGDLSV-D-QISETDFDLIVSAGNVMGFL 121 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTC---EEEEEESCHHHHHHHHHHCTTSEEEECCTTT-S-CCCCCCEEEEEECCCCGGGS
T ss_pred CCeEEEECCCCCHHHHHHHHCCC---cEEEEcCCHHHHHHHHHhCCCCcEEEccccc-C-CCCCCceeEEEECCcHHhhc
Confidence 56899999999999999988754 66777777678888777632 22222 2221 1 244 799999997 455543
Q ss_pred CCCcCHHHHHHHHhhcccCCcEEEEEeCHH---HHHHHHHHHhcCCceeEEeccC--CCC---CCcceEEEEEec
Q 006633 554 KDRCEMEDVLLEMDRILRPEGSVIIRDDVD---ILVKIKSITDGMEWEGRIADHE--NGP---RQREKILFANKK 620 (637)
Q Consensus 554 ~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~---~~~~~~~~~~~~~W~~~~~~~e--~~~---~~~~~~l~~~K~ 620 (637)
..-+...+|-++-|+|+|||.+++..... ....+.++++...+++...... ..+ ..+.-+++++|+
T Consensus 122 -~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 122 -AEDGREPALANIHRALGADGRAVIGFGAGRGWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp -CHHHHHHHHHHHHHHEEEEEEEEEEEETTSSCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEEC
T ss_pred -ChHHHHHHHHHHHHHhCCCCEEEEEeCCCCCcCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEEEEEecC
Confidence 22245789999999999999999975432 4566777777777776643221 111 234557777774
No 306
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.49 E-value=3.3e-07 Score=92.67 Aligned_cols=163 Identities=12% Similarity=0.013 Sum_probs=103.4
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCCCCceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----cc--c
Q 006633 452 REDTALWKKRVTYYKSVDYQLAQPGRYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL--I 524 (637)
Q Consensus 452 ~~d~~~w~~~v~~y~~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl--~ 524 (637)
....+.|.+++-.-..++..+.. ....+|||+|||.|..+..|+.. +- ..|+.+|.++.++.++.+. |+ +
T Consensus 56 ~~~~~~~~~~~~ds~~~l~~~~~-~~~~~vLDiG~G~G~~~i~la~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~l~~v 132 (249)
T 3g89_A 56 RGEEEVVVKHFLDSLTLLRLPLW-QGPLRVLDLGTGAGFPGLPLKIVRPE--LELVLVDATRKKVAFVERAIEVLGLKGA 132 (249)
T ss_dssp -CHHHHHHHHHHHHHGGGGSSCC-CSSCEEEEETCTTTTTHHHHHHHCTT--CEEEEEESCHHHHHHHHHHHHHHTCSSE
T ss_pred CCHHHHhhceeeechhhhccccc-CCCCEEEEEcCCCCHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhCCCce
Confidence 34456777766543344433332 34678999999999998887643 22 2456667776777777654 55 3
Q ss_pred chhhccccccCC---CCCccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe---CHHHHHHHHHHHhcCCce
Q 006633 525 GTYQNWCEAMST---YPRTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD---DVDILVKIKSITDGMEWE 598 (637)
Q Consensus 525 ~~~~~wce~~~~---yp~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d---~~~~~~~~~~~~~~~~W~ 598 (637)
-+++.-.+.+.. ++.+||+|-+..+ .+++.++-++-|+|||||.+++-. ..+.+..+++.++.+.|+
T Consensus 133 ~~~~~d~~~~~~~~~~~~~fD~I~s~a~-------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~~~l~~~G~~ 205 (249)
T 3g89_A 133 RALWGRAEVLAREAGHREAYARAVARAV-------APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLPPALERLGGR 205 (249)
T ss_dssp EEEECCHHHHTTSTTTTTCEEEEEEESS-------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHHHHHHHHTEE
T ss_pred EEEECcHHHhhcccccCCCceEEEECCc-------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHHHHHHHcCCe
Confidence 444422233332 3479999988443 467899999999999999998854 356777777778888887
Q ss_pred eEEec-c-CCCCCCcceEEEEEecCCCC
Q 006633 599 GRIAD-H-ENGPRQREKILFANKKYWTA 624 (637)
Q Consensus 599 ~~~~~-~-e~~~~~~~~~l~~~K~~w~~ 624 (637)
..... - -.+....-.+++.+|.-.++
T Consensus 206 ~~~~~~~~~p~~~~~R~l~~~~k~~~t~ 233 (249)
T 3g89_A 206 LGEVLALQLPLSGEARHLVVLEKTAPTP 233 (249)
T ss_dssp EEEEEEEECTTTCCEEEEEEEEECSCCC
T ss_pred EEEEEEeeCCCCCCcEEEEEEEeCCCCC
Confidence 65322 1 11222234566677755544
No 307
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.48 E-value=2.2e-07 Score=89.92 Aligned_cols=96 Identities=28% Similarity=0.436 Sum_probs=70.2
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhc-ccchhhccccccCCCC-CccceeeeccccccCC
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG-LIGTYQNWCEAMSTYP-RTYDLIHADSIFSLYK 554 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg-l~~~~~~wce~~~~yp-~t~Dl~H~~~lfs~~~ 554 (637)
...+|||+|||.|.++..| +. -+|+.+|.++.++..+.++. -+..++.-.+.+ ++| .+||+|.+.+++....
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~-~~~~~~fD~v~~~~~l~~~~ 109 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PY--PQKVGVEPSEAMLAVGRRRAPEATWVRAWGEAL-PFPGESFDVVLLFTTLEFVE 109 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CC--SEEEEECCCHHHHHHHHHHCTTSEEECCCTTSC-CSCSSCEEEEEEESCTTTCS
T ss_pred CCCeEEEECCCCCHhHHhC---CC--CeEEEEeCCHHHHHHHHHhCCCcEEEEcccccC-CCCCCcEEEEEEcChhhhcC
Confidence 3568999999999999998 22 15566677778888888873 122222111222 244 7999999988776554
Q ss_pred CCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006633 555 DRCEMEDVLLEMDRILRPEGSVIIRDD 581 (637)
Q Consensus 555 ~~c~~~~~l~e~dRiLrPgG~~i~~d~ 581 (637)
+...+|.|+-|+|||||.+++.+.
T Consensus 110 ---~~~~~l~~~~~~L~pgG~l~i~~~ 133 (211)
T 2gs9_A 110 ---DVERVLLEARRVLRPGGALVVGVL 133 (211)
T ss_dssp ---CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ---CHHHHHHHHHHHcCCCCEEEEEec
Confidence 568999999999999999999853
No 308
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.48 E-value=8.9e-07 Score=95.69 Aligned_cols=101 Identities=13% Similarity=-0.006 Sum_probs=66.7
Q ss_pred CCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHH----HcCCCeEEEEeccccC-CCCCCCeeEEEeccccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFAL----ERGVPALIGVMASIRL-PYPSRAFDMAHCSRCLI 293 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~----erg~~~~~~~~d~~~L-pfpd~sFDlV~~s~~L~ 293 (637)
+.+|||+|||+|.++..++..+..++.+ |+++.+++.|+ .++....+...|.... +...+.||+|++..-..
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga~V~av---Dis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGAYALAV---DKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCEEEEE---ESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCeEEEcccchhHHHHHHHHcCCeEEEE---ECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 4499999999999999999876444333 44445544443 3355555667776553 22233499999864321
Q ss_pred cCCcC-------CHHHHHHHHHhcccCCeEEEEEeC
Q 006633 294 PWGQY-------ADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 294 h~~~~-------d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.-... +...++.++.++|||||.|++...
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 11100 345789999999999999997754
No 309
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.47 E-value=4e-07 Score=91.87 Aligned_cols=122 Identities=16% Similarity=0.194 Sum_probs=89.3
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCCC-Cccceeeec
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-RTYDLIHAD 547 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~yp-~t~Dl~H~~ 547 (637)
...+|||+|||.|.++..|+++.-. +|+.+|.++.++..+.++ |+ +-+++ |..+....++ .+||+|-++
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~--~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~n 126 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKA--KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCN 126 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCC--EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEEC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCC--cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEEC
Confidence 3578999999999999999887442 677888887788777664 44 33343 4433333354 899999997
Q ss_pred ccccc-----------------CCCCcCHHHHHHHHhhcccCCcEEEEEeCHHHHHHHHHHHhcCCceeE
Q 006633 548 SIFSL-----------------YKDRCEMEDVLLEMDRILRPEGSVIIRDDVDILVKIKSITDGMEWEGR 600 (637)
Q Consensus 548 ~lfs~-----------------~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~~~~~~~~~~~~~~W~~~ 600 (637)
--|.. +...+.++.++.++-|+|||||.+++--..+.+..+.+.++...|...
T Consensus 127 pPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~~~~~~ 196 (259)
T 3lpm_A 127 PPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPK 196 (259)
T ss_dssp CCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHHHHTTEEEE
T ss_pred CCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHHHHCCCceE
Confidence 55422 122356778999999999999999998777778888888888888765
No 310
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.47 E-value=2.5e-07 Score=96.11 Aligned_cols=87 Identities=16% Similarity=0.256 Sum_probs=56.8
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc----C-CCeEEEEeccccC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER----G-VPALIGVMASIRL 276 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er----g-~~~~~~~~d~~~L 276 (637)
...++.+.+.+...++ .+|||||||+|.++..|++++..++.+ |+++.+++.++++ + .++.+..+|...+
T Consensus 28 ~~i~~~i~~~~~~~~~--~~VLDiG~G~G~lt~~La~~~~~v~~v---Di~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 28 PGILDKIIYAAKIKSS--DIVLEIGCGTGNLTVKLLPLAKKVITI---DIDSRMISEVKKRCLYEGYNNLEVYEGDAIKT 102 (299)
T ss_dssp HHHHHHHHHHHCCCTT--CEEEEECCTTSTTHHHHTTTSSEEEEE---CSCHHHHHHHHHHHHHTTCCCEEC----CCSS
T ss_pred HHHHHHHHHhcCCCCc--CEEEEEcCcCcHHHHHHHhcCCEEEEE---ECCHHHHHHHHHHHHHcCCCceEEEECchhhC
Confidence 3456667777665544 499999999999999999885444444 4444555544432 3 3577888888777
Q ss_pred CCCCCCeeEEEeccccccCC
Q 006633 277 PYPSRAFDMAHCSRCLIPWG 296 (637)
Q Consensus 277 pfpd~sFDlV~~s~~L~h~~ 296 (637)
+++ +||+|+++..+ ++.
T Consensus 103 ~~~--~~D~Vv~n~py-~~~ 119 (299)
T 2h1r_A 103 VFP--KFDVCTANIPY-KIS 119 (299)
T ss_dssp CCC--CCSEEEEECCG-GGH
T ss_pred Ccc--cCCEEEEcCCc-ccc
Confidence 654 79999998655 454
No 311
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.47 E-value=6.1e-07 Score=90.93 Aligned_cols=129 Identities=13% Similarity=0.039 Sum_probs=85.9
Q ss_pred HHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC----CEEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccCCC
Q 006633 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN----ILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRLPY 278 (637)
Q Consensus 205 i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~----v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~Lpf 278 (637)
++.+.++++ ++ .+|||||||+|.++..|++.+ ++++|+++..+..+..+. ...++ .+.+..+|......
T Consensus 12 L~~i~~~v~--~g--~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~-~~~gl~~~I~v~~gD~l~~~~ 86 (244)
T 3gnl_A 12 LEKVASYIT--KN--ERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQV-RSSGLTEQIDVRKGNGLAVIE 86 (244)
T ss_dssp HHHHHTTCC--SS--EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHH-HHTTCTTTEEEEECSGGGGCC
T ss_pred HHHHHHhCC--CC--CEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-HHcCCCceEEEEecchhhccC
Confidence 445555553 33 489999999999999999874 566666554444333322 23354 37888888766655
Q ss_pred CCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHhceee
Q 006633 279 PSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWKK 358 (637)
Q Consensus 279 pd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w~~ 358 (637)
++..||+|+.....-. -...++.+..+.|+++|+|+++.. .. ...+++.....+|..
T Consensus 87 ~~~~~D~IviagmGg~----lI~~IL~~~~~~L~~~~~lIlq~~------------~~-------~~~lr~~L~~~Gf~i 143 (244)
T 3gnl_A 87 KKDAIDTIVIAGMGGT----LIRTILEEGAAKLAGVTKLILQPN------------IA-------AWQLREWSEQNNWLI 143 (244)
T ss_dssp GGGCCCEEEEEEECHH----HHHHHHHHTGGGGTTCCEEEEEES------------SC-------HHHHHHHHHHHTEEE
T ss_pred ccccccEEEEeCCchH----HHHHHHHHHHHHhCCCCEEEEEcC------------CC-------hHHHHHHHHHCCCEE
Confidence 4446999987554311 355688999999999999999853 11 234666777778876
Q ss_pred ecc
Q 006633 359 LIQ 361 (637)
Q Consensus 359 v~~ 361 (637)
+.+
T Consensus 144 ~~E 146 (244)
T 3gnl_A 144 TSE 146 (244)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 312
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.47 E-value=1.3e-07 Score=91.94 Aligned_cols=97 Identities=12% Similarity=0.165 Sum_probs=75.2
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcccchhh-ccccccCCCC-CccceeeeccccccCC
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQ-NWCEAMSTYP-RTYDLIHADSIFSLYK 554 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~-~wce~~~~yp-~t~Dl~H~~~lfs~~~ 554 (637)
...+|||+|||.|.++.+|.+.+ .+++.+|.++.++..+.++.. ..++ |..+...+++ .+||+|.+.+++....
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~---~~~~~~D~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~ 107 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKENG---TRVSGIEAFPEAAEQAKEKLD-HVVLGDIETMDMPYEEEQFDCVIFGDVLEHLF 107 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTTT---CEEEEEESSHHHHHHHHTTSS-EEEESCTTTCCCCSCTTCEEEEEEESCGGGSS
T ss_pred CCCcEEEeCCCCCHHHHHHHhcC---CeEEEEeCCHHHHHHHHHhCC-cEEEcchhhcCCCCCCCccCEEEECChhhhcC
Confidence 46799999999999999999886 467777887788888877753 2222 3332224455 8999999988887554
Q ss_pred CCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 555 DRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 555 ~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
+.+.+|-++-|+|+|||++++..
T Consensus 108 ---~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 108 ---DPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp ---CHHHHHHHTGGGEEEEEEEEEEE
T ss_pred ---CHHHHHHHHHHHcCCCCEEEEEe
Confidence 45899999999999999999975
No 313
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.47 E-value=1.8e-07 Score=88.14 Aligned_cols=115 Identities=14% Similarity=0.222 Sum_probs=82.6
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCCCCccceeeecc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYPRTYDLIHADS 548 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~yp~t~Dl~H~~~ 548 (637)
...+|||+|||.|.++..|++.. .+|+.+|.++..+..+.++ |+ +-+++ |+.+.+.. ...||+|-+++
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~D~v~~~~ 108 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCK-IPDIDIAVVGG 108 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTT-SCCEEEEEESC
T ss_pred CCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhccc-CCCCCEEEECC
Confidence 35799999999999999998876 4677777776778777663 33 22222 22221211 14899999876
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-HHHHHHHHHHHhcCCceeEE
Q 006633 549 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-VDILVKIKSITDGMEWEGRI 601 (637)
Q Consensus 549 lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-~~~~~~~~~~~~~~~W~~~~ 601 (637)
.+. .+..+|-++-|+|+|||.+++.+. .+....+.++++...|++..
T Consensus 109 ~~~------~~~~~l~~~~~~l~~gG~l~~~~~~~~~~~~~~~~l~~~g~~~~~ 156 (192)
T 1l3i_A 109 SGG------ELQEILRIIKDKLKPGGRIIVTAILLETKFEAMECLRDLGFDVNI 156 (192)
T ss_dssp CTT------CHHHHHHHHHHTEEEEEEEEEEECBHHHHHHHHHHHHHTTCCCEE
T ss_pred chH------HHHHHHHHHHHhcCCCcEEEEEecCcchHHHHHHHHHHCCCceEE
Confidence 652 468999999999999999999764 56777788887777776554
No 314
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.47 E-value=1.8e-07 Score=93.16 Aligned_cols=98 Identities=16% Similarity=0.110 Sum_probs=71.5
Q ss_pred CCceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhhcc-cchhhccccccCCCCCccceeeecccccc
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYERGL-IGTYQNWCEAMSTYPRTYDLIHADSIFSL 552 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eRgl-~~~~~~wce~~~~yp~t~Dl~H~~~lfs~ 552 (637)
....+|||+|||.|.++.+|.+. +. +|+.+|.++.++..+.++.- +-..+.=.+.++ .+.+||+|++..+|..
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~---~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 107 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVN---VITGIDSDDDMLEKAADRLPNTNFGKADLATWK-PAQKADLLYANAVFQW 107 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTT---SEEEEESCHHHHHHHHHHSTTSEEEECCTTTCC-CSSCEEEEEEESCGGG
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCC---EEEEEECCHHHHHHHHHhCCCcEEEECChhhcC-ccCCcCEEEEeCchhh
Confidence 44678999999999999998765 32 34555666688888888721 122221112333 3489999999887775
Q ss_pred CCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 553 YKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 553 ~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
.. +.+.+|-|+-|+|||||++++..
T Consensus 108 ~~---~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 108 VP---DHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp ST---THHHHHHHHGGGEEEEEEEEEEE
T ss_pred CC---CHHHHHHHHHHhcCCCeEEEEEe
Confidence 53 56899999999999999999985
No 315
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.46 E-value=2.3e-07 Score=89.14 Aligned_cols=112 Identities=18% Similarity=0.132 Sum_probs=78.8
Q ss_pred eEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc-cchhh-ccccccCCCC-Cccceeeecccccc
Q 006633 480 NLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQ-NWCEAMSTYP-RTYDLIHADSIFSL 552 (637)
Q Consensus 480 ~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-~~~~~-~wce~~~~yp-~t~Dl~H~~~lfs~ 552 (637)
+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++ |+ +.++. |. +.+ .+| .+||+|.+. |..
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~-~~~~~~fD~v~~~--~~~ 104 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY---EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNL-ADF-DIVADAWEGIVSI--FCH 104 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC---EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBT-TTB-SCCTTTCSEEEEE--CCC
T ss_pred CEEEECCCCCHhHHHHHhCCC---eEEEEECCHHHHHHHHHHHHhcCCceEEEEcCh-hhc-CCCcCCccEEEEE--hhc
Confidence 899999999999999998864 777788887888888776 33 22222 21 222 244 799999883 332
Q ss_pred CCCCcCHHHHHHHHhhcccCCcEEEEEeCH-----------------HHHHHHHHHHhcCCceeEE
Q 006633 553 YKDRCEMEDVLLEMDRILRPEGSVIIRDDV-----------------DILVKIKSITDGMEWEGRI 601 (637)
Q Consensus 553 ~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~-----------------~~~~~~~~~~~~~~W~~~~ 601 (637)
+ ..-+...+|-++-|+|||||.+++.+.. -....++++++ .|++..
T Consensus 105 ~-~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~ 167 (202)
T 2kw5_A 105 L-PSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLI 167 (202)
T ss_dssp C-CHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEE
T ss_pred C-CHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEE
Confidence 2 3335678999999999999999998421 13356666666 666653
No 316
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.46 E-value=2.1e-07 Score=93.73 Aligned_cols=96 Identities=22% Similarity=0.353 Sum_probs=72.1
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcccchhh--ccccccCCCC-CccceeeeccccccCC
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQ--NWCEAMSTYP-RTYDLIHADSIFSLYK 554 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~--~wce~~~~yp-~t~Dl~H~~~lfs~~~ 554 (637)
..+|||+|||.|.++..|.+.+. +|+.+|.++.++..+.++.. +.+. |. +.++ +| .+||+|-+.+++-.+.
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~~~---~v~gvD~s~~~l~~a~~~~~-~~~~~~d~-~~~~-~~~~~fD~v~~~~~~~~~~ 128 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQERGF---EVVLVDPSKEMLEVAREKGV-KNVVEAKA-EDLP-FPSGAFEAVLALGDVLSYV 128 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTTTC---EEEEEESCHHHHHHHHHHTC-SCEEECCT-TSCC-SCTTCEEEEEECSSHHHHC
T ss_pred CCeEEEeCCCcCHHHHHHHHcCC---eEEEEeCCHHHHHHHHhhcC-CCEEECcH-HHCC-CCCCCEEEEEEcchhhhcc
Confidence 56899999999999999998864 67777888889999988865 2111 11 2222 44 7999999876443332
Q ss_pred CCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006633 555 DRCEMEDVLLEMDRILRPEGSVIIRDD 581 (637)
Q Consensus 555 ~~c~~~~~l~e~dRiLrPgG~~i~~d~ 581 (637)
. +...+|-|+-|+|||||.+++...
T Consensus 129 ~--~~~~~l~~~~~~LkpgG~l~~~~~ 153 (260)
T 2avn_A 129 E--NKDKAFSEIRRVLVPDGLLIATVD 153 (260)
T ss_dssp S--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c--cHHHHHHHHHHHcCCCeEEEEEeC
Confidence 2 278999999999999999999753
No 317
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.45 E-value=8.2e-07 Score=96.73 Aligned_cols=113 Identities=11% Similarity=0.052 Sum_probs=77.8
Q ss_pred HHHHHhcccCCCCCEEEEECCCCchHHHHHhhc----CCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCC--CCC
Q 006633 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLP--YPS 280 (637)
Q Consensus 207 ~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~----~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lp--fpd 280 (637)
.+..++...++ .+|||+|||+|..+..+++. .++++|+++..+..... .+...+.++.+...|...++ +++
T Consensus 237 ~~~~~l~~~~g--~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~-~~~~~g~~~~~~~~D~~~~~~~~~~ 313 (429)
T 1sqg_A 237 GCMTWLAPQNG--EHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYD-NLKRLGMKATVKQGDGRYPSQWCGE 313 (429)
T ss_dssp THHHHHCCCTT--CEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHH-HHHHTTCCCEEEECCTTCTHHHHTT
T ss_pred HHHHHcCCCCc--CeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-HHHHcCCCeEEEeCchhhchhhccc
Confidence 44555555554 49999999999999999875 36777777655544333 23344666788888877765 566
Q ss_pred CCeeEEEec------cccccCC-------cCC-------HHHHHHHHHhcccCCeEEEEEeC
Q 006633 281 RAFDMAHCS------RCLIPWG-------QYA-------DGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 281 ~sFDlV~~s------~~L~h~~-------~~d-------~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++||+|++. .++.+.+ .++ ...++.++.++|||||++++++.
T Consensus 314 ~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 314 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp CCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred CCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 889999962 1222211 101 14789999999999999999874
No 318
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.45 E-value=3.7e-07 Score=96.36 Aligned_cols=103 Identities=15% Similarity=0.122 Sum_probs=69.9
Q ss_pred CCCEEEEECCCCchHHHHHhhc---------CCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEe
Q 006633 218 SIRTAIDTGCGVASWGAYLMSR---------NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHC 288 (637)
Q Consensus 218 ~~r~VLDIGCGtG~~a~~La~~---------~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~ 288 (637)
...+|||+|||+|.++..+++. .+.++++++..+..+..... ..+..+.+..+|... +.+.+.||+|++
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~-~~g~~~~i~~~D~l~-~~~~~~fD~Ii~ 207 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGAD-LQRQKMTLLHQDGLA-NLLVDPVDVVIS 207 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHH-HHTCCCEEEESCTTS-CCCCCCEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHH-hCCCCceEEECCCCC-ccccCCccEEEE
Confidence 3458999999999999888754 24555554433332222222 235567788777655 335678999999
Q ss_pred ccccccCCcCC---------------H-HHHHHHHHhcccCCeEEEEEeC
Q 006633 289 SRCLIPWGQYA---------------D-GLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 289 s~~L~h~~~~d---------------~-~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+..+.++..++ . ..++.++.+.|||||.+++..|
T Consensus 208 NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 208 DLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp ECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 98765443211 1 2589999999999999999986
No 319
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.45 E-value=6.5e-07 Score=89.75 Aligned_cols=134 Identities=14% Similarity=0.166 Sum_probs=86.8
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc-cc-----hhhccc-cccCCCCCccceeeeccc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IG-----TYQNWC-EAMSTYPRTYDLIHADSI 549 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-~~-----~~~~wc-e~~~~yp~t~Dl~H~~~l 549 (637)
...+|||+|||+|+|+..|++.+. -.|+.+|.+++++..+..+.- +. -+...+ +.+.. .-||.+-++.+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~--~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~~D~v 112 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGA--KLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ--GRPSFTSIDVS 112 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--SEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS--CCCSEEEECCS
T ss_pred CCCEEEEEccCCCHHHHHHHhcCC--CEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc--CCCCEEEEEEE
Confidence 356899999999999999988864 267778888889988766432 11 111111 22221 12455555555
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-------------------H---HHHHHHHHHHhcCCceeEEeccC--
Q 006633 550 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-------------------V---DILVKIKSITDGMEWEGRIADHE-- 605 (637)
Q Consensus 550 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-------------------~---~~~~~~~~~~~~~~W~~~~~~~e-- 605 (637)
|+. +..+|-|+-|+|||||.+++... . .....+.++++...|++...+..
T Consensus 113 ~~~------l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi 186 (232)
T 3opn_A 113 FIS------LDLILPPLYEILEKNGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPI 186 (232)
T ss_dssp SSC------GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSS
T ss_pred hhh------HHHHHHHHHHhccCCCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccC
Confidence 543 37899999999999999998611 1 14456777788888887755432
Q ss_pred CCCC-CcceEEEEEec
Q 006633 606 NGPR-QREKILFANKK 620 (637)
Q Consensus 606 ~~~~-~~~~~l~~~K~ 620 (637)
.|+. +.|.++.++|.
T Consensus 187 ~g~~gn~e~l~~~~~~ 202 (232)
T 3opn_A 187 KGGAGNVEFLVHLLKD 202 (232)
T ss_dssp CBTTTBCCEEEEEEES
T ss_pred CCCCCCHHHHHHHhhc
Confidence 2222 35677777773
No 320
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.43 E-value=2.8e-07 Score=93.36 Aligned_cols=103 Identities=8% Similarity=0.003 Sum_probs=72.9
Q ss_pred CCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhc-----c---------------------------
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG-----L--------------------------- 523 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg-----l--------------------------- 523 (637)
....+|||+|||+|.+...++..+. -+|+.+|.++.++..+.++- -
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~--~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSF--QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhhh--cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 3467899999999999888887765 47888899888888776531 0
Q ss_pred ---cc-hhh-cccc--ccCCC-CCccceeeeccccccC-CCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 524 ---IG-TYQ-NWCE--AMSTY-PRTYDLIHADSIFSLY-KDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 524 ---~~-~~~-~wce--~~~~y-p~t~Dl~H~~~lfs~~-~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
|. +++ |..+ .+... ..+||+|-+..++... .+.-++..+|-+|-|+|||||+||+++
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 00 111 2222 11112 2689999998777642 333456789999999999999999985
No 321
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.42 E-value=3.1e-07 Score=101.33 Aligned_cols=108 Identities=24% Similarity=0.315 Sum_probs=71.8
Q ss_pred HHHHhcccCCCCCEEEEECCCCchHHHHHhhc-----CCEEEEcCccccHHHHHHHHH----HcCCCeEEEEeccccCC-
Q 006633 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-----NILAVSFAPRDTHEAQVQFAL----ERGVPALIGVMASIRLP- 277 (637)
Q Consensus 208 L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-----~v~~vdisp~Dls~a~i~~A~----erg~~~~~~~~d~~~Lp- 277 (637)
+..++...++. +|||+|||+|..+..|+++ .++++|+ ++.+++.++ ..+..+.+...|...++
T Consensus 93 ~a~~L~~~~g~--~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDi-----s~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~ 165 (464)
T 3m6w_A 93 VGVLLDPKPGE--RVLDLAAAPGGKTTHLAARMGGKGLLLANEV-----DGKRVRGLLENVERWGAPLAVTQAPPRALAE 165 (464)
T ss_dssp HHHHHCCCTTC--EEEESSCTTCHHHHHHHHHTTTCSEEEEECS-----CHHHHHHHHHHHHHHCCCCEEECSCHHHHHH
T ss_pred HHHhcCcCCCC--EEEEEcCCcCHHHHHHHHhCCCCCEEEEEEC-----CHHHHHHHHHHHHHcCCeEEEEECCHHHhhh
Confidence 34455545544 9999999999999999865 2455555 444444443 23555777777776665
Q ss_pred CCCCCeeEEEe----c--cccc-------cCCcCC-------HHHHHHHHHhcccCCeEEEEEeC
Q 006633 278 YPSRAFDMAHC----S--RCLI-------PWGQYA-------DGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 278 fpd~sFDlV~~----s--~~L~-------h~~~~d-------~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+.+++||+|++ + .++. +|..++ ...+|.++.++|||||.|++++.
T Consensus 166 ~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 166 AFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp HHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred hccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 34678999995 1 1111 122111 26789999999999999999864
No 322
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.42 E-value=1.2e-06 Score=95.50 Aligned_cols=128 Identities=14% Similarity=0.173 Sum_probs=79.1
Q ss_pred CCeeecCCCCCCCccc---HHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC--CEEEEcCccccHHHHHHHH
Q 006633 185 GDRFSFPGGGTMFPRG---ADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFA 259 (637)
Q Consensus 185 g~~~~Fpg~g~~f~~g---~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~--v~~vdisp~Dls~a~i~~A 259 (637)
+-.|.++ .+.+|... .+.+++.+.+.+....+ .+|||+|||+|.++..|++.. ++++|+++..+..+..+ +
T Consensus 253 g~~~~~~-~~~f~q~n~~~~e~l~~~~~~~l~~~~~--~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n-~ 328 (433)
T 1uwv_A 253 GLRLTFS-PRDFIQVNAGVNQKMVARALEWLDVQPE--DRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQN-A 328 (433)
T ss_dssp TEEEECC-SSSCCCSBHHHHHHHHHHHHHHHTCCTT--CEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHH-H
T ss_pred CEEEEEC-cccccccCHHHHHHHHHHHHHhhcCCCC--CEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHH-H
Confidence 3334443 33455432 44455666666654443 489999999999999999875 45555544333322222 2
Q ss_pred HHcCC-CeEEEEecccc----CCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 260 LERGV-PALIGVMASIR----LPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 260 ~erg~-~~~~~~~d~~~----Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
...+. ++.+..+|... +++++++||+|++..-. . ....+++.+. .++|++.++++..
T Consensus 329 ~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr---~--g~~~~~~~l~-~~~p~~ivyvsc~ 390 (433)
T 1uwv_A 329 RLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPAR---A--GAAGVMQQII-KLEPIRIVYVSCN 390 (433)
T ss_dssp HHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCT---T--CCHHHHHHHH-HHCCSEEEEEESC
T ss_pred HHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECCCC---c--cHHHHHHHHH-hcCCCeEEEEECC
Confidence 23343 58888888766 44667889999997532 2 1234555554 3799999998853
No 323
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.41 E-value=1.7e-07 Score=90.05 Aligned_cols=141 Identities=10% Similarity=0.061 Sum_probs=79.2
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc-cchhh-ccccccCC---CCCccceeeec
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQ-NWCEAMST---YPRTYDLIHAD 547 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-~~~~~-~wce~~~~---yp~t~Dl~H~~ 547 (637)
...+|||+|||.|.++.+|++..- ..+|+.+|.++.++..+.++ |+ +-+++ |+.+.+.. .+.+||+|-++
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred CCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEEC
Confidence 367999999999999999987610 13556666666666666554 22 22222 44442222 23799999986
Q ss_pred cccccCC-------------CCcC----------HHHHHHHHhhcccCCcE-EEEEeCHHHHHHHHHHHh--cCCceeEE
Q 006633 548 SIFSLYK-------------DRCE----------MEDVLLEMDRILRPEGS-VIIRDDVDILVKIKSITD--GMEWEGRI 601 (637)
Q Consensus 548 ~lfs~~~-------------~~c~----------~~~~l~e~dRiLrPgG~-~i~~d~~~~~~~~~~~~~--~~~W~~~~ 601 (637)
--|.... .... +..++-++-|+|||||+ +++.-.......+.+++. ...|....
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~l~~~~~gf~~~~ 188 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGHNQADEVARLFAPWRERGFRVR 188 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTTSCHHHHHHHTGGGGGGTEECC
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECCccHHHHHHHHHHhhcCCceEE
Confidence 5543211 0111 16788999999999999 777655555666777776 55554322
Q ss_pred eccCCCCCCcceEEEEEec
Q 006633 602 ADHENGPRQREKILFANKK 620 (637)
Q Consensus 602 ~~~e~~~~~~~~~l~~~K~ 620 (637)
.-.+ ..+.+++++++|.
T Consensus 189 ~~~~--~~~~~r~~~~~~~ 205 (215)
T 4dzr_A 189 KVKD--LRGIDRVIAVTRE 205 (215)
T ss_dssp EEEC--TTSCEEEEEEEEC
T ss_pred EEEe--cCCCEEEEEEEEc
Confidence 1111 1245789998874
No 324
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.41 E-value=1.8e-06 Score=89.12 Aligned_cols=143 Identities=10% Similarity=0.044 Sum_probs=87.3
Q ss_pred CCCCCcccHHHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHcCC--CeE
Q 006633 193 GGTMFPRGADAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALERGV--PAL 267 (637)
Q Consensus 193 ~g~~f~~g~~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~erg~--~~~ 267 (637)
...+|-.+...-..++.+++ .++ .+|||+|||+|.++..+++++ |+++|++|..+... .+.+..+++ .+.
T Consensus 104 ~k~~f~~~~~~er~ri~~~~--~~g--~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~-~~N~~~N~v~~~v~ 178 (278)
T 3k6r_A 104 AKIMFSPANVKERVRMAKVA--KPD--ELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFL-VENIHLNKVEDRMS 178 (278)
T ss_dssp TTSCCCGGGHHHHHHHHHHC--CTT--CEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHH-HHHHHHTTCTTTEE
T ss_pred cceEEcCCcHHHHHHHHHhc--CCC--CEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHH-HHHHHHcCCCCcEE
Confidence 34455455544445566554 343 499999999999999988774 45555544322222 122333444 367
Q ss_pred EEEeccccCCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhH
Q 006633 268 IGVMASIRLPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGI 347 (637)
Q Consensus 268 ~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~i 347 (637)
+..+|...++ +.+.||.|+.+.- . ....++..+.++|||||.+.+...... ........+.+
T Consensus 179 ~~~~D~~~~~-~~~~~D~Vi~~~p-----~-~~~~~l~~a~~~lk~gG~ih~~~~~~e-----------~~~~~~~~e~i 240 (278)
T 3k6r_A 179 AYNMDNRDFP-GENIADRILMGYV-----V-RTHEFIPKALSIAKDGAIIHYHNTVPE-----------KLMPREPFETF 240 (278)
T ss_dssp EECSCTTTCC-CCSCEEEEEECCC-----S-SGGGGHHHHHHHEEEEEEEEEEEEEEG-----------GGTTTTTHHHH
T ss_pred EEeCcHHHhc-cccCCCEEEECCC-----C-cHHHHHHHHHHHcCCCCEEEEEeeecc-----------cccchhHHHHH
Confidence 7778877765 4578999997642 1 345688889999999999877532100 00011123456
Q ss_pred HHHHHHhceee
Q 006633 348 ETIARSLCWKK 358 (637)
Q Consensus 348 e~la~~l~w~~ 358 (637)
+++++..+++.
T Consensus 241 ~~~~~~~g~~v 251 (278)
T 3k6r_A 241 KRITKEYGYDV 251 (278)
T ss_dssp HHHHHHTTCEE
T ss_pred HHHHHHcCCcE
Confidence 67777887764
No 325
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.40 E-value=7.1e-07 Score=95.71 Aligned_cols=103 Identities=16% Similarity=0.107 Sum_probs=69.9
Q ss_pred CCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHcCC-CeEEEEeccccCCC----CCCCeeEEEeccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGV-PALIGVMASIRLPY----PSRAFDMAHCSRC 291 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~erg~-~~~~~~~d~~~Lpf----pd~sFDlV~~s~~ 291 (637)
+.+|||+|||+|.++..+++. .++++|+++..+..+..+ +..++. ++.+..+|...... .+++||+|++..-
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n-~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP 288 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEEN-ARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPP 288 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHH-HHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHH-HHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCC
Confidence 458999999999999999886 456666655443333322 223343 47888888655421 2578999998643
Q ss_pred cccCCc-------CCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 292 LIPWGQ-------YADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 292 L~h~~~-------~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
...... .....++.++.++|+|||.++++..
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 289 AFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp CSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 212111 0456789999999999999999875
No 326
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.40 E-value=4e-07 Score=92.03 Aligned_cols=126 Identities=15% Similarity=0.105 Sum_probs=89.2
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc-cchhh-ccccccCCCC-Cccceeeecccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQ-NWCEAMSTYP-RTYDLIHADSIF 550 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-~~~~~-~wce~~~~yp-~t~Dl~H~~~lf 550 (637)
..+|||+|||.|.++.++++.+. +|+.+|.++..+..+.++ |+ +.+++ |+.+ .+| ..||+|.++.++
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~---~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~---~~~~~~fD~Vv~n~~~ 194 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGG---KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA---ALPFGPFDLLVANLYA 194 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC---EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH---HGGGCCEEEEEEECCH
T ss_pred CCEEEEecCCCcHHHHHHHHhCC---eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhh---cCcCCCCCEEEECCcH
Confidence 46899999999999999988765 677778877888887775 43 22222 2222 243 789999986544
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-HHHHHHHHHHHhcCCceeEEeccCCCCCCcceEEEEEe
Q 006633 551 SLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-VDILVKIKSITDGMEWEGRIADHENGPRQREKILFANK 619 (637)
Q Consensus 551 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-~~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~K 619 (637)
. .+..++-++-|+|||||++++++. ......+.+.++...++......+ +.-..++++|
T Consensus 195 ~------~~~~~l~~~~~~LkpgG~lils~~~~~~~~~v~~~l~~~Gf~~~~~~~~----~~W~~l~~~k 254 (254)
T 2nxc_A 195 E------LHAALAPRYREALVPGGRALLTGILKDRAPLVREAMAGAGFRPLEEAAE----GEWVLLAYGR 254 (254)
T ss_dssp H------HHHHHHHHHHHHEEEEEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEEEE----TTEEEEEEEC
T ss_pred H------HHHHHHHHHHHHcCCCCEEEEEeeccCCHHHHHHHHHHCCCEEEEEecc----CCeEEEEEEC
Confidence 3 257899999999999999999853 345677888888877877644333 1234555554
No 327
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.40 E-value=1.6e-06 Score=86.92 Aligned_cols=128 Identities=11% Similarity=0.088 Sum_probs=83.0
Q ss_pred HHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC----CEEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccCCC
Q 006633 205 IDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN----ILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRLPY 278 (637)
Q Consensus 205 i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~----v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~Lpf 278 (637)
++.+.++++ ++ .+|||||||+|.++..+++.+ ++++|+++..+..+..+ +...++ .+.+...|... ++
T Consensus 6 L~~l~~~v~--~g--~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N-~~~~gl~~~i~~~~~d~l~-~l 79 (225)
T 3kr9_A 6 LELVASFVS--QG--AILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKN-VEAHGLKEKIQVRLANGLA-AF 79 (225)
T ss_dssp HHHHHTTSC--TT--EEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHH-HHHTTCTTTEEEEECSGGG-GC
T ss_pred HHHHHHhCC--CC--CEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHH-HHHcCCCceEEEEECchhh-hc
Confidence 344555543 33 489999999999999999874 56676655444433332 223454 37787777532 23
Q ss_pred CCC-CeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHhcee
Q 006633 279 PSR-AFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCWK 357 (637)
Q Consensus 279 pd~-sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w~ 357 (637)
+.+ .||+|+.....- . -...++.+....|+|+|+|++... . ....+.......+|.
T Consensus 80 ~~~~~~D~IviaG~Gg--~--~i~~Il~~~~~~L~~~~~lVlq~~------------~-------~~~~vr~~L~~~Gf~ 136 (225)
T 3kr9_A 80 EETDQVSVITIAGMGG--R--LIARILEEGLGKLANVERLILQPN------------N-------REDDLRIWLQDHGFQ 136 (225)
T ss_dssp CGGGCCCEEEEEEECH--H--HHHHHHHHTGGGCTTCCEEEEEES------------S-------CHHHHHHHHHHTTEE
T ss_pred ccCcCCCEEEEcCCCh--H--HHHHHHHHHHHHhCCCCEEEEECC------------C-------CHHHHHHHHHHCCCE
Confidence 333 699998755321 1 246789999999999999999743 0 123466677778887
Q ss_pred eecc
Q 006633 358 KLIQ 361 (637)
Q Consensus 358 ~v~~ 361 (637)
.+.+
T Consensus 137 i~~e 140 (225)
T 3kr9_A 137 IVAE 140 (225)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 328
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.39 E-value=1.8e-06 Score=92.95 Aligned_cols=103 Identities=9% Similarity=-0.015 Sum_probs=70.5
Q ss_pred CCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHcCC---CeEEEEeccccCCC----CCCCeeEEEe
Q 006633 219 IRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALERGV---PALIGVMASIRLPY----PSRAFDMAHC 288 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~erg~---~~~~~~~d~~~Lpf----pd~sFDlV~~ 288 (637)
+.+|||+|||+|.++..+++.+ ++++|+++..+..+..+ +..++. ++.+..+|...... .+.+||+|++
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n-~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~ 299 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQN-VELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM 299 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHH-HHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHH-HHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE
Confidence 3499999999999999999874 45555544333322222 223455 57888888655421 1468999999
Q ss_pred ccccc--------cCCcCCHHHHHHHHHhcccCCeEEEEEeCC
Q 006633 289 SRCLI--------PWGQYADGLYLIEVDRVLRPGGYWILSGPP 323 (637)
Q Consensus 289 s~~L~--------h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp 323 (637)
..-.. .... ....++.++.++|+|||.++++..+
T Consensus 300 dpP~~~~~~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 300 DPPKFVENKSQLMGACR-GYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp CCSSTTTCSSSSSCCCT-HHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCCCChhHHHHHHH-HHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 64221 1112 5678899999999999999998753
No 329
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.39 E-value=7.3e-07 Score=90.15 Aligned_cols=101 Identities=14% Similarity=0.083 Sum_probs=71.6
Q ss_pred CCCCEEEEECCCCchHHHHHhhc-CCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccC
Q 006633 217 GSIRTAIDTGCGVASWGAYLMSR-NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPW 295 (637)
Q Consensus 217 g~~r~VLDIGCGtG~~a~~La~~-~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~ 295 (637)
+...+|||||||+|.++..+... .+.++|+++..+...... +...+.+..+.+.|....+++. +||+|++.-+++|+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~~-~~~~g~~~~~~v~D~~~~~~~~-~~DvvLllk~lh~L 181 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITPF-AREKDWDFTFALQDVLCAPPAE-AGDLALIFKLLPLL 181 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHHH-HHHTTCEEEEEECCTTTSCCCC-BCSEEEEESCHHHH
T ss_pred CCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHHH-HHhcCCCceEEEeecccCCCCC-CcchHHHHHHHHHh
Confidence 34569999999999999987732 566666655433322222 2234677888888888777664 89999999888777
Q ss_pred CcCCHHHHHHHHHhcccCCeEEEEE
Q 006633 296 GQYADGLYLIEVDRVLRPGGYWILS 320 (637)
Q Consensus 296 ~~~d~~~~L~ei~RvLKPGG~Lvls 320 (637)
..+.....+ ++...|+++|.++-.
T Consensus 182 E~q~~~~~~-~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 182 EREQAGSAM-ALLQSLNTPRMAVSF 205 (253)
T ss_dssp HHHSTTHHH-HHHHHCBCSEEEEEE
T ss_pred hhhchhhHH-HHHHHhcCCCEEEEc
Confidence 653444444 889999999877654
No 330
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.39 E-value=7.7e-07 Score=98.58 Aligned_cols=112 Identities=13% Similarity=0.117 Sum_probs=72.1
Q ss_pred HHHHhcccCCCCCEEEEECCCCchHHHHHhhc---CCEEEEcCccccHHHHHHHHHH----cCC-CeEEEEeccccCCC-
Q 006633 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSR---NILAVSFAPRDTHEAQVQFALE----RGV-PALIGVMASIRLPY- 278 (637)
Q Consensus 208 L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~---~v~~vdisp~Dls~a~i~~A~e----rg~-~~~~~~~d~~~Lpf- 278 (637)
+..++......+.+|||+|||+|..+..|++. +..++.+ |+++.+++.+++ .+. ++.+...|...++.
T Consensus 107 ~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~av---Dis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~ 183 (479)
T 2frx_A 107 PVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILAN---EFSASRVKVLHANISRCGISNVALTHFDGRVFGAA 183 (479)
T ss_dssp HHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEE---CSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHH
T ss_pred HHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEE---ECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhh
Confidence 34445444113449999999999999999875 2333333 444444444433 244 57788888777653
Q ss_pred CCCCeeEEEec------cccc-------cCCcC-------CHHHHHHHHHhcccCCeEEEEEeC
Q 006633 279 PSRAFDMAHCS------RCLI-------PWGQY-------ADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 279 pd~sFDlV~~s------~~L~-------h~~~~-------d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.+++||.|++. .++. +|..+ ....+|.++.++|||||.|++++.
T Consensus 184 ~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 184 VPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp STTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 46789999972 1111 12210 134689999999999999999865
No 331
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.38 E-value=3.9e-07 Score=88.75 Aligned_cols=99 Identities=20% Similarity=0.315 Sum_probs=71.7
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhc-----ccchhh-ccccccCCCC-Cccceeeecccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG-----LIGTYQ-NWCEAMSTYP-RTYDLIHADSIF 550 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg-----l~~~~~-~wce~~~~yp-~t~Dl~H~~~lf 550 (637)
..+|||+|||.|.++..|.+..- +|+.+|.++.++..+.++- -+..++ |..+ + ++| .+||+|.++.++
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~-~-~~~~~~~D~v~~~~~~ 113 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK-L-SFEDKTFDYVIFIDSI 113 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS-C-CSCTTCEEEEEEESCG
T ss_pred CCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhc-C-CCCCCcEEEEEEcCch
Confidence 56899999999999999988754 6777777777888877652 122222 2221 2 244 799999998774
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH
Q 006633 551 SLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV 582 (637)
Q Consensus 551 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~ 582 (637)
..+. .-+...+|-++-|+|||||.+++.+..
T Consensus 114 ~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 114 VHFE-PLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp GGCC-HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred HhCC-HHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 4332 234578999999999999999998653
No 332
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.38 E-value=3e-07 Score=93.95 Aligned_cols=122 Identities=9% Similarity=0.053 Sum_probs=78.6
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhc------------------ccc-------------
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG------------------LIG------------- 525 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg------------------l~~------------- 525 (637)
...+|||+|||+|.++..+...+. -+|+.+|.++.++..+.++- +-|
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHF--EDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGC--SEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhccCC--CeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 357899999999996544444322 26777888888888766520 111
Q ss_pred -----hhh-ccccccC----CCC-CccceeeeccccccCCCC-cCHHHHHHHHhhcccCCcEEEEEeCH-----------
Q 006633 526 -----TYQ-NWCEAMS----TYP-RTYDLIHADSIFSLYKDR-CEMEDVLLEMDRILRPEGSVIIRDDV----------- 582 (637)
Q Consensus 526 -----~~~-~wce~~~----~yp-~t~Dl~H~~~lfs~~~~~-c~~~~~l~e~dRiLrPgG~~i~~d~~----------- 582 (637)
+.+ |..+..+ .+| .+||+|-+..+|...... -+...+|-|+-|+|||||++++.+..
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~~~~~ 228 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEAR 228 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEETTEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEcCCee
Confidence 000 3222121 243 679999998877653322 35679999999999999999996311
Q ss_pred -----HHHHHHHHHHhcCCceeE
Q 006633 583 -----DILVKIKSITDGMEWEGR 600 (637)
Q Consensus 583 -----~~~~~~~~~~~~~~W~~~ 600 (637)
-....+.++++.-.++..
T Consensus 229 ~~~~~~~~~~l~~~l~~aGf~~~ 251 (289)
T 2g72_A 229 LTVVPVSEEEVREALVRSGYKVR 251 (289)
T ss_dssp EECCCCCHHHHHHHHHHTTEEEE
T ss_pred eeeccCCHHHHHHHHHHcCCeEE
Confidence 134567777776666654
No 333
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.37 E-value=1.4e-06 Score=89.05 Aligned_cols=124 Identities=17% Similarity=0.111 Sum_probs=80.9
Q ss_pred CCEEEEECCCCchHHHHHhhc----CCEEEEcCccccHHHHHHHHH----HcCCCeEEEEeccccCCCCCCCeeEEEecc
Q 006633 219 IRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFAL----ERGVPALIGVMASIRLPYPSRAFDMAHCSR 290 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~----~v~~vdisp~Dls~a~i~~A~----erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~ 290 (637)
..+|||||||+|-++..++.. .+.++|+++ .++++++ ..+++..+.+.|...-+ +.+.||+|++.-
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~-----~~le~a~~~l~~~g~~~~~~v~D~~~~~-p~~~~DvaL~lk 206 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDA-----RLVGFVDEALTRLNVPHRTNVADLLEDR-LDEPADVTLLLK 206 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBH-----HHHHHHHHHHHHTTCCEEEEECCTTTSC-CCSCCSEEEETT
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCH-----HHHHHHHHHHHhcCCCceEEEeeecccC-CCCCcchHHHHH
Confidence 559999999999999888766 456666644 4444443 34777888877765554 567899999999
Q ss_pred ccccCCcCCHHHHHHHHHhcccCCeEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHhce
Q 006633 291 CLIPWGQYADGLYLIEVDRVLRPGGYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCW 356 (637)
Q Consensus 291 ~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w 356 (637)
+++++.++.....+ ++...|+|+|.++-... ..--. +++.....-...++..+...+|
T Consensus 207 ti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~-ksl~G------rs~gm~~~Y~~~~e~~~~~~g~ 264 (281)
T 3lcv_B 207 TLPCLETQQRGSGW-EVIDIVNSPNIVVTFPT-KSLGQ------RSKGMFQNYSQSFESQARERSC 264 (281)
T ss_dssp CHHHHHHHSTTHHH-HHHHHSSCSEEEEEEEC-C-------------CHHHHHHHHHHHHHHHHTC
T ss_pred HHHHhhhhhhHHHH-HHHHHhCCCCEEEeccc-hhhcC------CCcchhhHHHHHHHHHHHhcCC
Confidence 99777653344555 99999999998876521 00001 1222222223456777777777
No 334
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.37 E-value=3.2e-07 Score=88.34 Aligned_cols=97 Identities=14% Similarity=0.197 Sum_probs=68.3
Q ss_pred ceeEeeecccchhhh-hhhcCCCeEEEEeccCCCCcchhHHHHhh----cc-cchhh-ccccccCCCC-Cccceeeeccc
Q 006633 478 YRNLLDMNAYLGGFA-AALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQ-NWCEAMSTYP-RTYDLIHADSI 549 (637)
Q Consensus 478 ~r~vlD~~~g~ggfa-a~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-~~~~~-~wce~~~~yp-~t~Dl~H~~~l 549 (637)
..+|||+|||.|.+. ..+...+. +|+.+|.++.++..+.++ |. +...+ |. +.+ ++| .+||+|.+.++
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~-~~~-~~~~~~fD~v~~~~~ 98 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGY---KTYGIEISDLQLKKAENFSRENNFKLNISKGDI-RKL-PFKDESMSFVYSYGT 98 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTC---EEEEEECCHHHHHHHHHHHHHHTCCCCEEECCT-TSC-CSCTTCEEEEEECSC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCC---EEEEEECCHHHHHHHHHHHHhcCCceEEEECch-hhC-CCCCCceeEEEEcCh
Confidence 568999999999984 44555543 667778877888887765 22 22222 22 222 244 89999999877
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 550 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 550 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
+.... .-+...+|-++-|+|||||.+++.+
T Consensus 99 l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 99 IFHMR-KNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp GGGSC-HHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHhCC-HHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 65432 2456799999999999999999975
No 335
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.37 E-value=1e-06 Score=96.37 Aligned_cols=117 Identities=16% Similarity=0.130 Sum_probs=80.0
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhh-----------------cCCEEEEcCccccHHHHHHHHHHcCC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMS-----------------RNILAVSFAPRDTHEAQVQFALERGV 264 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~-----------------~~v~~vdisp~Dls~a~i~~A~erg~ 264 (637)
+..++.+.+++.... +.+|||.|||+|.++..+++ ..+.++++++.....+..+.. ..+.
T Consensus 157 ~~v~~~mv~~l~~~~--~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~-l~g~ 233 (445)
T 2okc_A 157 RPLIQAMVDCINPQM--GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY-LHGI 233 (445)
T ss_dssp HHHHHHHHHHHCCCT--TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH-HTTC
T ss_pred HHHHHHHHHHhCCCC--CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH-HhCC
Confidence 456667777775444 34899999999999887764 257777776544433333222 2344
Q ss_pred ---CeEEEEeccccCCCCCCCeeEEEeccccccCCcCC---------------HHHHHHHHHhcccCCeEEEEEeC
Q 006633 265 ---PALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQYA---------------DGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 265 ---~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~~d---------------~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
...+..+|+...+.. ..||+|+++.-+.+....+ ...+++.+.++|||||.+++..|
T Consensus 234 ~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 234 GTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 566777787666644 4899999987664432101 13789999999999999999876
No 336
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.37 E-value=2.6e-07 Score=93.81 Aligned_cols=121 Identities=12% Similarity=0.037 Sum_probs=84.6
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhc-c-------------------cchhhccccccCCC
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG-L-------------------IGTYQNWCEAMSTY 537 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg-l-------------------~~~~~~wce~~~~y 537 (637)
..+|||+|||.|.++.+|++++. +|+.+|.++.++..+.++- + -.-+.-.|..+...
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~G~---~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADRGH---TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHTTC---EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCeEEEeCCCCcHHHHHHHHCCC---eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 46899999999999999999875 6888899989999987653 1 01111123333333
Q ss_pred C----CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEE-EeC-----------HHHHHHHHHHHhcCCceeEE
Q 006633 538 P----RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVII-RDD-----------VDILVKIKSITDGMEWEGRI 601 (637)
Q Consensus 538 p----~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~-~d~-----------~~~~~~~~~~~~~~~W~~~~ 601 (637)
| .+||+|-+.++|.... ..+.+.++-||-|+|||||.+++ +-. .-..+.+.+++.. .|++..
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~-~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~~ 223 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAIN-PGDHDRYADIILSLLRKEFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQC 223 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSC-GGGHHHHHHHHHHTEEEEEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEEE
T ss_pred CcccCCCEEEEEEhhhhhhCC-HHHHHHHHHHHHHHcCCCeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEEE
Confidence 2 7899999888776553 34567899999999999999964 311 0123567777765 377764
Q ss_pred ec
Q 006633 602 AD 603 (637)
Q Consensus 602 ~~ 603 (637)
..
T Consensus 224 ~~ 225 (252)
T 2gb4_A 224 LE 225 (252)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 337
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.37 E-value=1.9e-07 Score=96.01 Aligned_cols=95 Identities=14% Similarity=0.223 Sum_probs=69.4
Q ss_pred eEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc---------cchhh-ccccccCCCCCccceeeec-c
Q 006633 480 NLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL---------IGTYQ-NWCEAMSTYPRTYDLIHAD-S 548 (637)
Q Consensus 480 ~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl---------~~~~~-~wce~~~~yp~t~Dl~H~~-~ 548 (637)
+|||+|||.|.++.+|++.+. +|+.+|.++.++..+.++-- +-++. |.. .++ ++.+||+|.+. .
T Consensus 85 ~vLDlGcG~G~~~~~l~~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~-~~~-~~~~fD~v~~~~~ 159 (299)
T 3g2m_A 85 PVLELAAGMGRLTFPFLDLGW---EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMS-AFA-LDKRFGTVVISSG 159 (299)
T ss_dssp CEEEETCTTTTTHHHHHTTTC---CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTT-BCC-CSCCEEEEEECHH
T ss_pred cEEEEeccCCHHHHHHHHcCC---eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchh-cCC-cCCCcCEEEECCc
Confidence 899999999999999998863 56777877788888877621 22222 222 222 36999998863 4
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 549 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 549 lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
++.. .+.-++..+|-++-|+|||||.++|..
T Consensus 160 ~~~~-~~~~~~~~~l~~~~~~L~pgG~l~~~~ 190 (299)
T 3g2m_A 160 SINE-LDEADRRGLYASVREHLEPGGKFLLSL 190 (299)
T ss_dssp HHTT-SCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccc-CCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 4432 233346899999999999999999974
No 338
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.36 E-value=1.1e-06 Score=94.62 Aligned_cols=103 Identities=13% Similarity=0.029 Sum_probs=70.3
Q ss_pred CCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccCCC----CCCCeeEEEec
Q 006633 219 IRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRLPY----PSRAFDMAHCS 289 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~Lpf----pd~sFDlV~~s 289 (637)
+.+|||+|||+|.++..+++.+ ++++|+++..+..+..+ +..++. ++.+..+|...+.. .+++||+|++.
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n-~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKEN-AKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHH-HHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH-HHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 4599999999999999999873 55566655433333222 223344 57888888655421 25789999996
Q ss_pred cccccCCc-------CCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 290 RCLIPWGQ-------YADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 290 ~~L~h~~~-------~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.-...... .+...++.++.++|+|||.++++..
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 43211110 1456789999999999999999865
No 339
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.36 E-value=4.4e-07 Score=97.26 Aligned_cols=100 Identities=18% Similarity=0.180 Sum_probs=71.5
Q ss_pred CCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhhccccccCCCCCccceeeecc
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQNWCEAMSTYPRTYDLIHADS 548 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~~wce~~~~yp~t~Dl~H~~~ 548 (637)
....+|||+|||+|.++..|++.+. -.|+.+|.+ +++..+.++ |+ |-+++.=.+.+ .+|..||+|.++.
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~g~--~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~Iv~~~ 137 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQAGA--RKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDI-SLPEKVDVIISEW 137 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHTTC--SEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGC-CCSSCEEEEEECC
T ss_pred CCCCEEEEeccCcCHHHHHHHhcCC--CEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhc-CcCCcceEEEEcC
Confidence 3467899999999999999988754 256677777 777776554 43 33333111222 2458999999966
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEE
Q 006633 549 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIR 579 (637)
Q Consensus 549 lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~ 579 (637)
+.......-.++.++-+++|+|+|||.+|+.
T Consensus 138 ~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 138 MGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp CBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred hhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 5544444456788999999999999999885
No 340
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.34 E-value=1.9e-07 Score=97.18 Aligned_cols=103 Identities=13% Similarity=0.132 Sum_probs=70.7
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc-cc----------hh-hccc------cccC-CCC
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IG----------TY-QNWC------EAMS-TYP 538 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-~~----------~~-~~wc------e~~~-~yp 538 (637)
..+|||+|||.|+....++..+. -+|+.+|.++.++..+.+|-- .+ .| ...+ +.+. .+|
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~--~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEI--ALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCeEEEEecCCcHhHHHHHhcCC--CeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 56899999999987766665554 367888999999999988731 11 01 1111 2222 355
Q ss_pred -CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH
Q 006633 539 -RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV 582 (637)
Q Consensus 539 -~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~ 582 (637)
.+||+|-|..++-..-+.-....+|-|+-|+|||||++|++...
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 89999988654421111124689999999999999999998643
No 341
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.34 E-value=8.3e-07 Score=89.39 Aligned_cols=84 Identities=12% Similarity=0.154 Sum_probs=60.6
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcC---CCeEEEEeccccCCC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERG---VPALIGVMASIRLPY 278 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg---~~~~~~~~d~~~Lpf 278 (637)
...++.+.+.+...++ .+|||||||+|.++..|++++..++.+ |+++.+++.++++. .++.+..+|...+++
T Consensus 16 ~~~~~~i~~~~~~~~~--~~VLDiG~G~G~lt~~l~~~~~~v~~v---D~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~ 90 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEH--DNIFEIGSGKGHFTLELVQRCNFVTAI---EIDHKLCKTTENKLVDHDNFQVLNKDILQFKF 90 (244)
T ss_dssp HHHHHHHHTTCCCCTT--CEEEEECCTTSHHHHHHHHHSSEEEEE---CSCHHHHHHHHHHTTTCCSEEEECCCGGGCCC
T ss_pred HHHHHHHHHhCCCCCC--CEEEEEeCCchHHHHHHHHcCCeEEEE---ECCHHHHHHHHHhhccCCCeEEEEChHHhCCc
Confidence 4456667776655444 499999999999999999986555555 56667777776553 368889999999988
Q ss_pred CC-CCeeEEEeccc
Q 006633 279 PS-RAFDMAHCSRC 291 (637)
Q Consensus 279 pd-~sFDlV~~s~~ 291 (637)
++ ..| .|+++.-
T Consensus 91 ~~~~~~-~vv~nlP 103 (244)
T 1qam_A 91 PKNQSY-KIFGNIP 103 (244)
T ss_dssp CSSCCC-EEEEECC
T ss_pred ccCCCe-EEEEeCC
Confidence 74 456 4666543
No 342
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.34 E-value=1.4e-06 Score=95.78 Aligned_cols=112 Identities=18% Similarity=0.173 Sum_probs=70.5
Q ss_pred HHHHhcccCCCCCEEEEECCCCchHHHHHhhc-----CCEEEEcCccccHHHHHHHHHHcCC-CeEEEEeccccCC-CCC
Q 006633 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-----NILAVSFAPRDTHEAQVQFALERGV-PALIGVMASIRLP-YPS 280 (637)
Q Consensus 208 L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-----~v~~vdisp~Dls~a~i~~A~erg~-~~~~~~~d~~~Lp-fpd 280 (637)
+..++...++. +|||+|||+|..+..|++. .++++|+++..+.....+ +...+. ++.+...|...++ +.+
T Consensus 97 ~~~~L~~~~g~--~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n-~~r~g~~nv~v~~~Da~~l~~~~~ 173 (456)
T 3m4x_A 97 VGTAAAAKPGE--KVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSEN-IERWGVSNAIVTNHAPAELVPHFS 173 (456)
T ss_dssp HHHHHCCCTTC--EEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHH-HHHHTCSSEEEECCCHHHHHHHHT
T ss_pred HHHHcCCCCCC--EEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHH-HHHcCCCceEEEeCCHHHhhhhcc
Confidence 44455555544 9999999999999998875 245555544332222222 222344 4777777776654 345
Q ss_pred CCeeEEEeccc------cc-------cCCcC-------CHHHHHHHHHhcccCCeEEEEEeC
Q 006633 281 RAFDMAHCSRC------LI-------PWGQY-------ADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 281 ~sFDlV~~s~~------L~-------h~~~~-------d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
++||+|++..- +. .|..+ ....+|.++.++|||||.|++++-
T Consensus 174 ~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 174 GFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp TCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred ccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 78999997321 10 11110 122689999999999999999864
No 343
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.34 E-value=6.5e-07 Score=91.19 Aligned_cols=136 Identities=12% Similarity=0.204 Sum_probs=89.7
Q ss_pred ceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----cc--cchhh-ccccccCCCCCccceeeeccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTYPRTYDLIHADSI 549 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~-~wce~~~~yp~t~Dl~H~~~l 549 (637)
..+|||+|||.|.++.+|++. +- .+|+.+|.++.++.++.++ |+ +-+++ |+.+.+. +.+||+|-++--
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~~~--~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~--~~~fD~Iv~npP 185 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASERPD--CEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA--GQQFAMIVSNPP 185 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTT--SEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT--TCCEEEEEECCC
T ss_pred CCEEEEecCCccHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc--cCCccEEEECCC
Confidence 458999999999999998743 32 2567778877888887765 44 33333 4443321 478999998733
Q ss_pred cccC------------CCC----------cCHHHHHHHHhhcccCCcEEEEEeCHHHHHHHHHHHhcCCceeEEeccCCC
Q 006633 550 FSLY------------KDR----------CEMEDVLLEMDRILRPEGSVIIRDDVDILVKIKSITDGMEWEGRIADHENG 607 (637)
Q Consensus 550 fs~~------------~~~----------c~~~~~l~e~dRiLrPgG~~i~~d~~~~~~~~~~~~~~~~W~~~~~~~e~~ 607 (637)
+... ..+ -.+..++-++-|+|+|||++++.........++++++...|+......+
T Consensus 186 y~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~v~~~~d-- 263 (276)
T 2b3t_A 186 YIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRD-- 263 (276)
T ss_dssp CBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCSSCHHHHHHHHHHTTCTTCCEEEC--
T ss_pred CCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECchHHHHHHHHHHHCCCcEEEEEec--
Confidence 3211 111 1346788999999999999999866656667777777666653321111
Q ss_pred CCCcceEEEEEe
Q 006633 608 PRQREKILFANK 619 (637)
Q Consensus 608 ~~~~~~~l~~~K 619 (637)
-.+.+++++++|
T Consensus 264 ~~g~~r~~~~~~ 275 (276)
T 2b3t_A 264 YGDNERVTLGRY 275 (276)
T ss_dssp TTSSEEEEEEEC
T ss_pred CCCCCcEEEEEE
Confidence 124678888875
No 344
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.34 E-value=4.1e-07 Score=93.12 Aligned_cols=121 Identities=9% Similarity=-0.013 Sum_probs=82.5
Q ss_pred CCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcccchhh-cccccc----CCCCCccceeeecccc
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQ-NWCEAM----STYPRTYDLIHADSIF 550 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~-~wce~~----~~yp~t~Dl~H~~~lf 550 (637)
....+|||+|||+|.++..|++++- .|+.+|.++.++..+.++---..++ +|.+.- ...+.+||+|-++.++
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~g~---~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l 120 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALERGA---SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDRLI 120 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHTTC---EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEESCG
T ss_pred CCcCEEEEEeCcchHHHHHHHhcCC---EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhhhh
Confidence 3467899999999999999998754 6777888889999998874211122 333211 1234789999998877
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH----HHHHHHHHHHhcCCceeEE
Q 006633 551 SLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV----DILVKIKSITDGMEWEGRI 601 (637)
Q Consensus 551 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~----~~~~~~~~~~~~~~W~~~~ 601 (637)
..+.. -+...+|.+|-|+| |||.++++-.. .-...++.....-.|....
T Consensus 121 ~~~~~-~~~~~~l~~l~~lL-PGG~l~lS~~~g~~~~d~~~l~~~~~~g~~~~~~ 173 (261)
T 3iv6_A 121 NRFTT-EEARRACLGMLSLV-GSGTVRASVKLGFYDIDLKLIEYGEQSGTLAKFF 173 (261)
T ss_dssp GGSCH-HHHHHHHHHHHHHH-TTSEEEEEEEBSCCHHHHHHHHHHHTTTCHHHHE
T ss_pred HhCCH-HHHHHHHHHHHHhC-cCcEEEEEeccCcccccHHHHHHHHhcCCeeeee
Confidence 65432 24568999999999 99999998432 1233444445555554433
No 345
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.33 E-value=2.4e-07 Score=91.91 Aligned_cols=99 Identities=10% Similarity=-0.032 Sum_probs=71.0
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcccchhhccccccCC------CC--Cccceeeeccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMST------YP--RTYDLIHADSI 549 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~~wce~~~~------yp--~t~Dl~H~~~l 549 (637)
..+|||+|||+|.++..|++..- +|+.+|.++.++..+.++--..-+.-.+..+.. ++ ..||+|.+..+
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~ 133 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTG 133 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESS
T ss_pred CCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcch
Confidence 56799999999999999987643 667778887888888877421111111122222 22 24999999888
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 550 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 550 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
+.... .-+...+|-++-|+|||||+++|.+
T Consensus 134 ~~~~~-~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 134 FHHIP-VEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp STTSC-GGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhcCC-HHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 77653 2356899999999999999998875
No 346
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.32 E-value=3.8e-06 Score=91.69 Aligned_cols=96 Identities=17% Similarity=0.130 Sum_probs=64.2
Q ss_pred CCEEEEECCCCchHHHHHhhcC--CEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccCC
Q 006633 219 IRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWG 296 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~--v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~ 296 (637)
+.+|||+|||+|.++..|++.+ ++++|+++..+..+..+ +..++..+.+..+|...+... +||+|++......
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n-~~~ngl~v~~~~~d~~~~~~~--~fD~Vv~dPPr~g-- 365 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRN-VEINNVDAEFEVASDREVSVK--GFDTVIVDPPRAG-- 365 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHHTCCEEEEECCTTTCCCT--TCSEEEECCCTTC--
T ss_pred CCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHH-HHHcCCcEEEEECChHHcCcc--CCCEEEEcCCccc--
Confidence 3489999999999999999875 55555554433333322 223344578888888776432 8999999653211
Q ss_pred cCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 297 QYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 297 ~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
....+++.+ +.|+|||.++++..
T Consensus 366 --~~~~~~~~l-~~l~p~givyvsc~ 388 (425)
T 2jjq_A 366 --LHPRLVKRL-NREKPGVIVYVSCN 388 (425)
T ss_dssp --SCHHHHHHH-HHHCCSEEEEEESC
T ss_pred --hHHHHHHHH-HhcCCCcEEEEECC
Confidence 223455555 45999999999853
No 347
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.32 E-value=2.4e-07 Score=99.26 Aligned_cols=99 Identities=18% Similarity=0.244 Sum_probs=73.7
Q ss_pred CceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhh---------c-c----cchhhccccccC-----
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER---------G-L----IGTYQNWCEAMS----- 535 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR---------g-l----~~~~~~wce~~~----- 535 (637)
...+|||+|||.|.++..|++. +- ..|+.+|.++.++..+.++ | + +-.++.-.+.+.
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEH--GKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTT--CEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 3578999999999999888764 21 2566677777899988887 5 2 223321112221
Q ss_pred CCC-CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 536 TYP-RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 536 ~yp-~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
++| .+||+|+++.+|.... +.+.+|-|+-|+|||||++++.+
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~---d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLST---NKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCS---CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcCC---CHHHHHHHHHHHcCCCCEEEEEE
Confidence 555 7999999999888655 36899999999999999999975
No 348
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.32 E-value=7.6e-07 Score=95.68 Aligned_cols=109 Identities=18% Similarity=0.232 Sum_probs=76.2
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc-----CCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-----NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRL 276 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-----~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~L 276 (637)
+..++.+.+++.... ..+|||+|||+|.++..++++ .+.++|+++..+. .| ..+.+...|....
T Consensus 25 ~~l~~~~~~~~~~~~--~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~-----~a----~~~~~~~~D~~~~ 93 (421)
T 2ih2_A 25 PEVVDFMVSLAEAPR--GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALD-----LP----PWAEGILADFLLW 93 (421)
T ss_dssp HHHHHHHHHHCCCCT--TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCC-----CC----TTEEEEESCGGGC
T ss_pred HHHHHHHHHhhccCC--CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHH-----hC----CCCcEEeCChhhc
Confidence 456667777765422 349999999999999999874 4677777665443 22 3567778887765
Q ss_pred CCCCCCeeEEEeccccccCCc---------CC------------------HHHHHHHHHhcccCCeEEEEEeC
Q 006633 277 PYPSRAFDMAHCSRCLIPWGQ---------YA------------------DGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 277 pfpd~sFDlV~~s~~L~h~~~---------~d------------------~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+ +.+.||+|+++.-+..... ++ ...+++.+.++|+|||.+++..|
T Consensus 94 ~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 94 E-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp C-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 4 3578999999754422111 01 12568899999999999999987
No 349
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.32 E-value=2.9e-06 Score=89.49 Aligned_cols=93 Identities=9% Similarity=-0.001 Sum_probs=65.9
Q ss_pred CCEEEEECCCCchHHHHHhhcC--CEEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccCCCCCCCeeEEEecccccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRLPYPSRAFDMAHCSRCLIP 294 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~--v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h 294 (637)
+.+|||+|||+|.++.. ++.. ++++|+++..+..+..+ +..++. ++.+..+|..... ++||+|++....
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n-~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~-- 268 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKN-IKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK-- 268 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHH-HHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT--
T ss_pred CCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHH-HHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH--
Confidence 34999999999999999 8753 45555544333332222 223343 5888888887765 789999986421
Q ss_pred CCcCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 295 WGQYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 295 ~~~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
....++.++.++|+|||.+++...
T Consensus 269 ----~~~~~l~~~~~~L~~gG~l~~~~~ 292 (336)
T 2yx1_A 269 ----FAHKFIDKALDIVEEGGVIHYYTI 292 (336)
T ss_dssp ----TGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred ----hHHHHHHHHHHHcCCCCEEEEEEe
Confidence 234689999999999999999753
No 350
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.31 E-value=1.3e-06 Score=85.90 Aligned_cols=97 Identities=21% Similarity=0.158 Sum_probs=60.2
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchh----HHHHhhcccc-hhhccccc--cCCCCCccceeeeccc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTL----GVIYERGLIG-TYQNWCEA--MSTYPRTYDLIHADSI 549 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l----~~~~eRgl~~-~~~~wce~--~~~yp~t~Dl~H~~~l 549 (637)
...+|||+|||+|.++..|++.-= .-.|..+|.++.++ ..+.++.-+- +..|..+. +..++.+||+|.++.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~- 134 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDI- 134 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECC-
T ss_pred CCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEec-
Confidence 356899999999999988876410 01455667665543 3333332122 22232221 133458999998862
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEE
Q 006633 550 FSLYKDRCEMEDVLLEMDRILRPEGSVIIR 579 (637)
Q Consensus 550 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~ 579 (637)
. ..-....+|.|+.|+|||||.+++.
T Consensus 135 -~---~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 135 -A---QKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp -C---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -c---ChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 1 1112345689999999999999997
No 351
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.31 E-value=8.9e-07 Score=86.96 Aligned_cols=118 Identities=11% Similarity=0.136 Sum_probs=80.6
Q ss_pred ceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----cc--cchhh-ccccccCC-CC-Cccceeeec
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMST-YP-RTYDLIHAD 547 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~-~wce~~~~-yp-~t~Dl~H~~ 547 (637)
-..|||+|||.|.++.+|++. +- .+|+.+|.+..++..+.++ |+ +-+++ |..+ +.. +| .+||.|++.
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~--~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~-l~~~~~~~~~d~v~~~ 115 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPD--INYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT-LTDVFEPGEVKRVYLN 115 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG-HHHHCCTTSCCEEEEE
T ss_pred CceEEEEecCCCHHHHHHHHHCCC--CCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCcCCcCEEEEE
Confidence 457999999999999999764 22 3677888888888887765 55 33333 3322 322 44 789988763
Q ss_pred ccccc-------CCCCcCHHHHHHHHhhcccCCcEEEEE-eCHHHHHHHHHHHhcCCceeE
Q 006633 548 SIFSL-------YKDRCEMEDVLLEMDRILRPEGSVIIR-DDVDILVKIKSITDGMEWEGR 600 (637)
Q Consensus 548 ~lfs~-------~~~~c~~~~~l~e~dRiLrPgG~~i~~-d~~~~~~~~~~~~~~~~W~~~ 600 (637)
|+. .+.+-..+.+|-++-|+|+|||.+++. |..+....+.+++....|...
T Consensus 116 --~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~g~~~~ 174 (213)
T 2fca_A 116 --FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDNRGLFEYSLKSFSEYGLLLT 174 (213)
T ss_dssp --SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESCHHHHHHHHHHHHHHTCEEE
T ss_pred --CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCccc
Confidence 321 112223478999999999999999986 566666666666655566543
No 352
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.30 E-value=2e-06 Score=81.38 Aligned_cols=128 Identities=13% Similarity=0.155 Sum_probs=88.6
Q ss_pred eeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcccchhhccccccCCCC-CccceeeeccccccCCC--
Q 006633 479 RNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMSTYP-RTYDLIHADSIFSLYKD-- 555 (637)
Q Consensus 479 r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~~wce~~~~yp-~t~Dl~H~~~lfs~~~~-- 555 (637)
.+|||+|||+|.++.+|+++. +|+.+|.++.++.. ... +.+++ +..+..++ .+||+|-++..|-....
T Consensus 25 ~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~--~~~-~~~~~--~d~~~~~~~~~fD~i~~n~~~~~~~~~~ 95 (170)
T 3q87_B 25 KIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES--HRG-GNLVR--ADLLCSINQESVDVVVFNPPYVPDTDDP 95 (170)
T ss_dssp CEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT--CSS-SCEEE--CSTTTTBCGGGCSEEEECCCCBTTCCCT
T ss_pred CeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc--ccC-CeEEE--CChhhhcccCCCCEEEECCCCccCCccc
Confidence 489999999999999999986 88888888777776 222 22222 12223444 89999999766653221
Q ss_pred ----CcCHHHHHHHHhhcccCCcEEEEEe-CHHHHHHHHHHHhcCCceeEEeccCCCCCCcceEEEEE
Q 006633 556 ----RCEMEDVLLEMDRILRPEGSVIIRD-DVDILVKIKSITDGMEWEGRIADHENGPRQREKILFAN 618 (637)
Q Consensus 556 ----~c~~~~~l~e~dRiLrPgG~~i~~d-~~~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~ 618 (637)
..+...++.++-|.| |||.+++.. .......+.++++...|+.......... .|++++.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~~~~~l~~~l~~~gf~~~~~~~~~~~--~e~~~~~~ 160 (170)
T 3q87_B 96 IIGGGYLGREVIDRFVDAV-TVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKIL--GETVYIIK 160 (170)
T ss_dssp TTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGGCHHHHHHHHHHTTCEEEEEEEEECS--SSEEEEEE
T ss_pred cccCCcchHHHHHHHHhhC-CCCEEEEEEecCCCHHHHHHHHHHCCCcEEEEEeeccC--CceEEEEE
Confidence 123346788888888 999999975 3456778888888888988755444333 45665554
No 353
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.30 E-value=9.6e-08 Score=98.48 Aligned_cols=102 Identities=15% Similarity=0.216 Sum_probs=72.2
Q ss_pred CceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhhc---------------------------------
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERG--------------------------------- 522 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRg--------------------------------- 522 (637)
...+|||+|||.|.++..|++. +- ..|+.+|.++.++..+.++-
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~--~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGP--SRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCC--SEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCC--CEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 3578999999999999999875 22 26677787777888887651
Q ss_pred -------------------------------ccchhh-ccccc---cCC-CCCccceeeeccccccCC---CCcCHHHHH
Q 006633 523 -------------------------------LIGTYQ-NWCEA---MST-YPRTYDLIHADSIFSLYK---DRCEMEDVL 563 (637)
Q Consensus 523 -------------------------------l~~~~~-~wce~---~~~-yp~t~Dl~H~~~lfs~~~---~~c~~~~~l 563 (637)
-+..++ |+... +.. .+.+||+|.|.+++...+ ....+..+|
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHH
Confidence 111111 32211 112 348999999988764322 445678999
Q ss_pred HHHhhcccCCcEEEEEe
Q 006633 564 LEMDRILRPEGSVIIRD 580 (637)
Q Consensus 564 ~e~dRiLrPgG~~i~~d 580 (637)
-++-|+|||||++||..
T Consensus 204 ~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHEEEEEEEEEEC
T ss_pred HHHHHHhCCCcEEEEec
Confidence 99999999999999963
No 354
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.30 E-value=2.1e-06 Score=86.23 Aligned_cols=133 Identities=14% Similarity=0.131 Sum_probs=86.5
Q ss_pred ceeEeeecccchhhhhhhcCC---CeEEEEeccCCCCcchhHHHHhh----ccc---chhh-ccccccCCCC--Ccccee
Q 006633 478 YRNLLDMNAYLGGFAAALVDD---PLWVMNTVPVEAKINTLGVIYER----GLI---GTYQ-NWCEAMSTYP--RTYDLI 544 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~---~v~~mnv~~~~~~~~~l~~~~eR----gl~---~~~~-~wce~~~~yp--~t~Dl~ 544 (637)
.++|||+|||.|.++.+|++. .. .|+.+|.++.++..+.++ |+- -++. |..+.+...+ .+||+|
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADG---QLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTC---EEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 579999999999999999875 22 455667666788877766 552 2222 3333344444 499999
Q ss_pred eeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH------------HHHHHHHH----HHhcCCceeEEeccCCCC
Q 006633 545 HADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV------------DILVKIKS----ITDGMEWEGRIADHENGP 608 (637)
Q Consensus 545 H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~------------~~~~~~~~----~~~~~~W~~~~~~~e~~~ 608 (637)
.+++- .-..+.+|-++-|+|||||++++.+-. .....+++ +...-+|...+...- |.
T Consensus 141 ~~d~~------~~~~~~~l~~~~~~LkpGG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~-g~ 213 (248)
T 3tfw_A 141 FIDAD------KPNNPHYLRWALRYSRPGTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTV-GT 213 (248)
T ss_dssp EECSC------GGGHHHHHHHHHHTCCTTCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEC-ST
T ss_pred EECCc------hHHHHHHHHHHHHhcCCCeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecC-CC
Confidence 88542 224567899999999999999986421 12223333 344556776654211 21
Q ss_pred CCcceEEEEEec
Q 006633 609 RQREKILFANKK 620 (637)
Q Consensus 609 ~~~~~~l~~~K~ 620 (637)
...+.+.+++|+
T Consensus 214 ~~~DG~~i~~~~ 225 (248)
T 3tfw_A 214 KGWDGFTLAWVN 225 (248)
T ss_dssp TCSEEEEEEEEC
T ss_pred CCCCeeEEEEEe
Confidence 235889999986
No 355
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.29 E-value=1.5e-06 Score=100.55 Aligned_cols=103 Identities=13% Similarity=0.064 Sum_probs=71.8
Q ss_pred CCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHcCC---CeEEEEecccc-CCCCCCCeeEEEeccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALERGV---PALIGVMASIR-LPYPSRAFDMAHCSRC 291 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~erg~---~~~~~~~d~~~-Lpfpd~sFDlV~~s~~ 291 (637)
+.+|||+|||+|.++..++..+ |+++|+++..+..+..+.+ .+++ .+.+..+|... ++...++||+|++..-
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~-~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLR-LNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH-HTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHH-HcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 3499999999999999998764 5666665544443333322 3343 47888888765 4445688999998642
Q ss_pred cc----------cCCcCCHHHHHHHHHhcccCCeEEEEEeCC
Q 006633 292 LI----------PWGQYADGLYLIEVDRVLRPGGYWILSGPP 323 (637)
Q Consensus 292 L~----------h~~~~d~~~~L~ei~RvLKPGG~Lvls~pp 323 (637)
.. +... +...++.++.++|+|||+|+++...
T Consensus 619 ~f~~~~~~~~~~~~~~-~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQR-DHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp SBC-------CCBHHH-HHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred cccCCccchhHHHHHH-HHHHHHHHHHHhcCCCcEEEEEECC
Confidence 11 1111 4567899999999999999998753
No 356
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.29 E-value=3.7e-08 Score=98.97 Aligned_cols=111 Identities=16% Similarity=0.146 Sum_probs=71.0
Q ss_pred HHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc---CCCeEEEEeccccCCCCC
Q 006633 204 YIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER---GVPALIGVMASIRLPYPS 280 (637)
Q Consensus 204 ~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er---g~~~~~~~~d~~~Lpfpd 280 (637)
.++.+.+.+...++ .+|||+|||+|.++..|++++..++++ |+++.+++.++++ ..++.+..+|...+++++
T Consensus 17 ~~~~i~~~~~~~~~--~~VLDiG~G~G~~~~~l~~~~~~v~~i---d~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~ 91 (245)
T 1yub_A 17 VLNQIIKQLNLKET--DTVYEIGTGKGHLTTKLAKISKQVTSI---ELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPN 91 (245)
T ss_dssp THHHHHHHCCCCSS--EEEEECSCCCSSCSHHHHHHSSEEEES---SSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCC
T ss_pred HHHHHHHhcCCCCC--CEEEEEeCCCCHHHHHHHHhCCeEEEE---ECCHHHHHHHHHHhccCCceEEEECChhhcCccc
Confidence 34566666655444 489999999999999999886544444 4444444444333 235778888888888774
Q ss_pred -CCeeEEEeccccccCCc----------CCHHHHH----HHHHhcccCCeEEEEEe
Q 006633 281 -RAFDMAHCSRCLIPWGQ----------YADGLYL----IEVDRVLRPGGYWILSG 321 (637)
Q Consensus 281 -~sFDlV~~s~~L~h~~~----------~d~~~~L----~ei~RvLKPGG~Lvls~ 321 (637)
++| .|+++.-+ +... .....++ +.+.|+|+|||.+.+..
T Consensus 92 ~~~f-~vv~n~Py-~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 92 KQRY-KIVGNIPY-HLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp SSEE-EEEEECCS-SSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred CCCc-EEEEeCCc-cccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 689 67776432 1110 0222333 66888899988876653
No 357
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.28 E-value=1.2e-06 Score=88.15 Aligned_cols=110 Identities=11% Similarity=0.149 Sum_probs=68.3
Q ss_pred HHHHhhhccCCCCCceeEeeecccchhhhhhhcCC-C--eEEEEeccCCCCcc------hhHHHHhh----cc---cchh
Q 006633 464 YYKSVDYQLAQPGRYRNLLDMNAYLGGFAAALVDD-P--LWVMNTVPVEAKIN------TLGVIYER----GL---IGTY 527 (637)
Q Consensus 464 ~y~~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~-~--v~~mnv~~~~~~~~------~l~~~~eR----gl---~~~~ 527 (637)
.+..++..+.. ....+|||+|||.|.++..|++. + . +|+.+|.++. ++..+.++ |+ +.+.
T Consensus 31 ~~~~l~~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~g~~~---~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~ 106 (275)
T 3bkx_A 31 HRLAIAEAWQV-KPGEKILEIGCGQGDLSAVLADQVGSSG---HVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVH 106 (275)
T ss_dssp HHHHHHHHHTC-CTTCEEEEESCTTSHHHHHHHHHHCTTC---EEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEE
T ss_pred HHHHHHHHcCC-CCCCEEEEeCCCCCHHHHHHHHHhCCCC---EEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEE
Confidence 34444443333 34678999999999999999865 1 3 3444444433 67766554 33 2222
Q ss_pred h-c-cccccCCCC-CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 528 Q-N-WCEAMSTYP-RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 528 ~-~-wce~~~~yp-~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
+ | ....-.++| .+||+|++.+++....+ .+.++-.+.++|+|||++++.+
T Consensus 107 ~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~---~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 107 FNTNLSDDLGPIADQHFDRVVLAHSLWYFAS---ANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp CSCCTTTCCGGGTTCCCSEEEEESCGGGSSC---HHHHHHHHHHHTTTCSEEEEEE
T ss_pred ECChhhhccCCCCCCCEEEEEEccchhhCCC---HHHHHHHHHHHhCCCCEEEEEE
Confidence 2 2 211222344 89999999888865543 3555555566777799999974
No 358
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.28 E-value=5.9e-07 Score=94.95 Aligned_cols=97 Identities=18% Similarity=0.177 Sum_probs=67.0
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhhccccccCCCC-Cccceeeecc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQNWCEAMSTYP-RTYDLIHADS 548 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~~wce~~~~yp-~t~Dl~H~~~ 548 (637)
...+|||+|||+|.++..|++.+. -.|+.+|.+ .++..+.++ |+ +-+++.=.+.+ .+| ..||+|-+..
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~g~--~~v~gvD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~Ivs~~ 139 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKAGA--KKVLGVDQS-EILYQAMDIIRLNKLEDTITLIKGKIEEV-HLPVEKVDVIISEW 139 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--SEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTS-CCSCSCEEEEEECC
T ss_pred CCCEEEEeeccCcHHHHHHHHcCC--CEEEEEChH-HHHHHHHHHHHHcCCCCcEEEEEeeHHHh-cCCCCcEEEEEEcC
Confidence 356899999999999999987753 245566666 366666543 43 33333111222 355 8999999877
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEE
Q 006633 549 IFSLYKDRCEMEDVLLEMDRILRPEGSVI 577 (637)
Q Consensus 549 lfs~~~~~c~~~~~l~e~dRiLrPgG~~i 577 (637)
+.......-.++.+|-++.|+|||||.++
T Consensus 140 ~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 140 MGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp CBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred chhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 53333344467789999999999999998
No 359
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.28 E-value=1.2e-06 Score=89.69 Aligned_cols=115 Identities=11% Similarity=0.107 Sum_probs=82.5
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cccchhhccccccCCC--CCccceeeeccccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMSTY--PRTYDLIHADSIFS 551 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl~~~~~~wce~~~~y--p~t~Dl~H~~~lfs 551 (637)
..+|||+|||+|+|+.+|++..-- .|+.+|.++.++..+.++ |+-..+.-.+.....+ +.+||+|.++..+
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~--~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~- 202 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKA--KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVV- 202 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCC--EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCS-
T ss_pred CCEEEEecccCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCch-
Confidence 568999999999999999875431 466678777788777664 5532122222222223 5799999885443
Q ss_pred cCCCCcCHHHHHHHHhhcccCCcEEEEEeC-------HHHHHHHHHHHhcCCceeEE
Q 006633 552 LYKDRCEMEDVLLEMDRILRPEGSVIIRDD-------VDILVKIKSITDGMEWEGRI 601 (637)
Q Consensus 552 ~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-------~~~~~~~~~~~~~~~W~~~~ 601 (637)
....++-++-|+|||||.+++.+. .+....+.+.++...|++..
T Consensus 203 ------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 203 ------RTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTTTHHHHHHHHHHTTCEEEE
T ss_pred ------hHHHHHHHHHHHCCCCeEEEEEEeeccccccccHHHHHHHHHHHcCCeeEE
Confidence 235788899999999999999643 24678888899999998876
No 360
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.27 E-value=3.5e-07 Score=92.92 Aligned_cols=101 Identities=15% Similarity=0.101 Sum_probs=72.5
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCC--CCccceeeec
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTY--PRTYDLIHAD 547 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~y--p~t~Dl~H~~ 547 (637)
..+|||+|||.|.++.+|++.+. .+|+.+|.++.++..+.++ |+ +.+.+ |. +.+ ++ +.+||+|.+.
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~-~~~-~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERAGI--GEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDS-YGR-HMDLGKEFDVISSQ 140 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHHTC--SEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCT-TTS-CCCCSSCEEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCc-ccc-ccCCCCCcCEEEEC
Confidence 56899999999999999887653 2566777777888887776 22 22222 22 222 23 4799999998
Q ss_pred cccccC-CCCcCHHHHHHHHhhcccCCcEEEEEeCH
Q 006633 548 SIFSLY-KDRCEMEDVLLEMDRILRPEGSVIIRDDV 582 (637)
Q Consensus 548 ~lfs~~-~~~c~~~~~l~e~dRiLrPgG~~i~~d~~ 582 (637)
+++... .+.-+...+|-++-|+|||||.+++....
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 776431 33445678999999999999999998643
No 361
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.26 E-value=1.9e-06 Score=84.02 Aligned_cols=122 Identities=12% Similarity=0.150 Sum_probs=81.2
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc--cchhh-ccccccCC-CC-Cccceeeecc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMST-YP-RTYDLIHADS 548 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~-~wce~~~~-yp-~t~Dl~H~~~ 548 (637)
...|||+|||.|.++.+|++..- -.+|+.+|.++.++..+.++ |+ +-+++ |+.+ +.. +| .+||+|.++.
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~~~D~i~~~~ 119 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD-LTDYFEDGEIDRLYLNF 119 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC-GGGTSCTTCCSEEEEES
T ss_pred CCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH-HHhhcCCCCCCEEEEEC
Confidence 45799999999999999876510 13567777777788877664 44 23333 3332 332 44 7899999863
Q ss_pred ccccC-----CCCcCHHHHHHHHhhcccCCcEEEEE-eCHHHHHHHHHHHhcCCceeEE
Q 006633 549 IFSLY-----KDRCEMEDVLLEMDRILRPEGSVIIR-DDVDILVKIKSITDGMEWEGRI 601 (637)
Q Consensus 549 lfs~~-----~~~c~~~~~l~e~dRiLrPgG~~i~~-d~~~~~~~~~~~~~~~~W~~~~ 601 (637)
..... +.+-..+.+|-++-|+|+|||.+++. |..+....+.+++....|....
T Consensus 120 ~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~g~~~~~ 178 (214)
T 1yzh_A 120 SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQYGMKLNG 178 (214)
T ss_dssp CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHHCCCeeee
Confidence 21111 11123468999999999999999996 4556667777776666676653
No 362
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.26 E-value=4.8e-07 Score=95.91 Aligned_cols=98 Identities=15% Similarity=0.176 Sum_probs=71.0
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHh----hcc---cchhhccccccCCCC-Cccceeeeccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYE----RGL---IGTYQNWCEAMSTYP-RTYDLIHADSI 549 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~e----Rgl---~~~~~~wce~~~~yp-~t~Dl~H~~~l 549 (637)
..+|||+|||.|.++..|++.+. ..|+.+|.+ .++..+.+ .|+ +.+++.=.+.+ .+| .+||+|.++.+
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~--~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~fD~Iis~~~ 142 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGA--RKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEV-ELPVEKVDIIISEWM 142 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTC--SEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSSCEEEEEECCC
T ss_pred CCEEEEEeccchHHHHHHHHCCC--CEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHc-cCCCCceEEEEEccc
Confidence 57899999999999999988754 355566666 46666554 354 23333111222 456 89999999777
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEE
Q 006633 550 FSLYKDRCEMEDVLLEMDRILRPEGSVIIR 579 (637)
Q Consensus 550 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~ 579 (637)
.......-.++.+|.+++|+|||||.+|..
T Consensus 143 ~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 143 GYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp BBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 665555667889999999999999999753
No 363
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.24 E-value=1.3e-06 Score=85.57 Aligned_cols=133 Identities=16% Similarity=0.137 Sum_probs=83.1
Q ss_pred ceeEeeecccchhhhhhhcCC---CeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCCC----Cccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDD---PLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP----RTYD 542 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~---~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~yp----~t~D 542 (637)
..+|||+|||+|.++.+|++. +. .|+.+|.++.++..+.++ |+ +.+++ |..+.+..++ .+||
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGG---RVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSC---EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 568999999999999999876 32 456667666777776654 55 22222 3223222232 5799
Q ss_pred eeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH------------HHHHHHHH----HHhcCCceeEEeccCC
Q 006633 543 LIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV------------DILVKIKS----ITDGMEWEGRIADHEN 606 (637)
Q Consensus 543 l~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~------------~~~~~~~~----~~~~~~W~~~~~~~e~ 606 (637)
+|.+++..+ ..+.+|-++-|+|||||.+++.+.. .....+++ +...-+|...+...-
T Consensus 136 ~v~~d~~~~------~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~- 208 (223)
T 3duw_A 136 FIFIDADKQ------NNPAYFEWALKLSRPGTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQTV- 208 (223)
T ss_dssp EEEECSCGG------GHHHHHHHHHHTCCTTCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEE-
T ss_pred EEEEcCCcH------HHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEecc-
Confidence 998865422 4468899999999999999986321 11222333 334456666654331
Q ss_pred CCCCcceEEEEEec
Q 006633 607 GPRQREKILFANKK 620 (637)
Q Consensus 607 ~~~~~~~~l~~~K~ 620 (637)
+..+.+.+++++|+
T Consensus 209 ~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 209 GSKGYDGFIMAVVK 222 (223)
T ss_dssp ETTEEEEEEEEEEC
T ss_pred CCCCCCeeEEEEEe
Confidence 11235678888764
No 364
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.24 E-value=1.9e-06 Score=91.47 Aligned_cols=99 Identities=14% Similarity=0.288 Sum_probs=69.2
Q ss_pred CceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhh----cccchhhcccc-ccC---CCCCccceeee
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCE-AMS---TYPRTYDLIHA 546 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gl~~~~~~wce-~~~---~yp~t~Dl~H~ 546 (637)
..++|||+|||.|.++.+|++. ++ .++..|. +.++..+.++ |+-+-+.--+. .+. ++|.+||+|.+
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~ 254 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEV---EVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWM 254 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTC---EEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCC---EEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEE
Confidence 4689999999999999999763 33 3444455 3677777665 44221111112 233 47889999999
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 547 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 547 ~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
..++..+.+. +...+|-++-|+|||||.++|.|
T Consensus 255 ~~vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 255 SQFLDCFSEE-EVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp ESCSTTSCHH-HHHHHHHHHHHHCCTTCEEEEEE
T ss_pred echhhhCCHH-HHHHHHHHHHHhcCCCcEEEEEe
Confidence 8887655432 34578999999999999999975
No 365
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.23 E-value=3.9e-07 Score=89.84 Aligned_cols=110 Identities=12% Similarity=0.114 Sum_probs=76.1
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc-cchhh-ccccccCCC-CCccceeeeccccccCC
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IGTYQ-NWCEAMSTY-PRTYDLIHADSIFSLYK 554 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-~~~~~-~wce~~~~y-p~t~Dl~H~~~lfs~~~ 554 (637)
..+|||+|||.|.++.+|++.+. .|+.+|.++.++..+.++.- +.+++ |+.+.++.- +.+||+|.+.
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~------- 118 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQAA---RWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR------- 118 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSS---EEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE-------
T ss_pred CCeEEEeCCCCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC-------
Confidence 46899999999999999998853 67777888889999988832 22222 443333322 4799999984
Q ss_pred CCcCHHHHHHHHhhcccCCcEEEEEeCHHHHHHHHHHHhcCCcee
Q 006633 555 DRCEMEDVLLEMDRILRPEGSVIIRDDVDILVKIKSITDGMEWEG 599 (637)
Q Consensus 555 ~~c~~~~~l~e~dRiLrPgG~~i~~d~~~~~~~~~~~~~~~~W~~ 599 (637)
-+...+|-++.|+|||||.++..........+.+.+....+..
T Consensus 119 --~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~Gf~~ 161 (226)
T 3m33_A 119 --RGPTSVILRLPELAAPDAHFLYVGPRLNVPEVPERLAAVGWDI 161 (226)
T ss_dssp --SCCSGGGGGHHHHEEEEEEEEEEESSSCCTHHHHHHHHTTCEE
T ss_pred --CCHHHHHHHHHHHcCCCcEEEEeCCcCCHHHHHHHHHHCCCeE
Confidence 2456889999999999999994432222334445444444443
No 366
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.23 E-value=2.9e-06 Score=84.17 Aligned_cols=130 Identities=12% Similarity=0.224 Sum_probs=84.7
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccC-CCCCccceeeecc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMS-TYPRTYDLIHADS 548 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~-~yp~t~Dl~H~~~ 548 (637)
..+|||+|||.|.++.+|++..- ...|+.+|.++.++..+.++ |+ +-+++ |..+.+. ..+.+||+|.++.
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~ 150 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA 150 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET
T ss_pred CCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC
Confidence 56899999999999999988310 23566667776777777654 43 33333 3333333 3468999998753
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-----------------HHHHHHHHH----HHhcCCceeEEeccCCC
Q 006633 549 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-----------------VDILVKIKS----ITDGMEWEGRIADHENG 607 (637)
Q Consensus 549 lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-----------------~~~~~~~~~----~~~~~~W~~~~~~~e~~ 607 (637)
- .-..+.+|-++-|+|||||.+++.+- ......+++ +.+.-++...+...
T Consensus 151 ~------~~~~~~~l~~~~~~LkpgG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~--- 221 (232)
T 3ntv_A 151 A------KAQSKKFFEIYTPLLKHQGLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFLNI--- 221 (232)
T ss_dssp T------SSSHHHHHHHHGGGEEEEEEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHHTCTTEEEEEECS---
T ss_pred c------HHHHHHHHHHHHHhcCCCeEEEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHHhcCCCeEEEEEEc---
Confidence 2 33467899999999999999999321 112233333 34455677666532
Q ss_pred CCCcceEEEEEec
Q 006633 608 PRQREKILFANKK 620 (637)
Q Consensus 608 ~~~~~~~l~~~K~ 620 (637)
.+.+.+++|+
T Consensus 222 ---~dG~~i~~k~ 231 (232)
T 3ntv_A 222 ---DDGLAISIKG 231 (232)
T ss_dssp ---TTCEEEEEEC
T ss_pred ---CCceEEEEEC
Confidence 3678888874
No 367
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.23 E-value=9.6e-07 Score=88.44 Aligned_cols=112 Identities=13% Similarity=0.119 Sum_probs=69.6
Q ss_pred eeEeeecccchhhhhhhcCC-----CeEEEEeccCCCCcchhHHHHhhcc---cchhh-ccccc--cCCCCC-ccceeee
Q 006633 479 RNLLDMNAYLGGFAAALVDD-----PLWVMNTVPVEAKINTLGVIYERGL---IGTYQ-NWCEA--MSTYPR-TYDLIHA 546 (637)
Q Consensus 479 r~vlD~~~g~ggfaa~l~~~-----~v~~mnv~~~~~~~~~l~~~~eRgl---~~~~~-~wce~--~~~yp~-t~Dl~H~ 546 (637)
.+|||+|||+|..++.|++. +- -.|+.+|.++.++..+. ++ +-+++ |..+. +...+. .||+|++
T Consensus 83 ~~VLDiG~GtG~~t~~la~~~~~~~~~--~~V~gvD~s~~~l~~a~--~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 83 RTIVELGVYNGGSLAWFRDLTKIMGID--CQVIGIDRDLSRCQIPA--SDMENITLHQGDCSDLTTFEHLREMAHPLIFI 158 (236)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHTTCC--CEEEEEESCCTTCCCCG--GGCTTEEEEECCSSCSGGGGGGSSSCSSEEEE
T ss_pred CEEEEEeCCCCHHHHHHHHhhhhcCCC--CEEEEEeCChHHHHHHh--ccCCceEEEECcchhHHHHHhhccCCCCEEEE
Confidence 58999999999999998763 11 13344444444544443 33 22222 32221 222233 7999998
Q ss_pred ccccccCCCCcCHHHHHHHHhh-cccCCcEEEEEeCH-----HHHHHHHHHHhcC--CceeE
Q 006633 547 DSIFSLYKDRCEMEDVLLEMDR-ILRPEGSVIIRDDV-----DILVKIKSITDGM--EWEGR 600 (637)
Q Consensus 547 ~~lfs~~~~~c~~~~~l~e~dR-iLrPgG~~i~~d~~-----~~~~~~~~~~~~~--~W~~~ 600 (637)
++. + -+.+.+|.|+.| +|||||++++.|.. .....+.++++.. .++..
T Consensus 159 d~~----~--~~~~~~l~~~~r~~LkpGG~lv~~d~~~~~~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 159 DNA----H--ANTFNIMKWAVDHLLEEGDYFIIEDMIPYWYRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp ESS----C--SSHHHHHHHHHHHTCCTTCEEEECSCHHHHHHHCHHHHHHHHHTTTTTEEEE
T ss_pred CCc----h--HhHHHHHHHHHHhhCCCCCEEEEEeCcccccccCHHHHHHHHHhCcccEEEc
Confidence 654 1 267889999998 99999999997631 1123667777766 45543
No 368
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.22 E-value=8.5e-07 Score=87.81 Aligned_cols=116 Identities=14% Similarity=0.118 Sum_probs=75.7
Q ss_pred CceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----cc--cchhh-ccccccCC-CC-Cccceeee
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMST-YP-RTYDLIHA 546 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~-~wce~~~~-yp-~t~Dl~H~ 546 (637)
.-..|||+|||.|.++.+|++. +- .+|+.+|.++.++..+.++ |+ +-+++ |-.+-+.. +| .+||+|++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~--~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPE--QDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQL 111 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCC--CeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEE
Confidence 3568999999999999999754 21 2566778777888776654 54 22222 22222221 44 89999987
Q ss_pred ccccccCCCC-----cCHHHHHHHHhhcccCCcEEEEE-eCHHHHHHHHHHHhc
Q 006633 547 DSIFSLYKDR-----CEMEDVLLEMDRILRPEGSVIIR-DDVDILVKIKSITDG 594 (637)
Q Consensus 547 ~~lfs~~~~~-----c~~~~~l~e~dRiLrPgG~~i~~-d~~~~~~~~~~~~~~ 594 (637)
+......+.+ -.-+.+|-++-|+|||||.+++. |.......+.+++..
T Consensus 112 ~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~~~~~~~~~~~~~~ 165 (218)
T 3dxy_A 112 FFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSS 165 (218)
T ss_dssp ESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHT
T ss_pred eCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 4222112222 22246999999999999999995 556666777766544
No 369
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.22 E-value=6e-06 Score=85.89 Aligned_cols=87 Identities=9% Similarity=0.039 Sum_probs=66.0
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYP 279 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfp 279 (637)
...++.+.+.+...++. +|||||||+|.++..|+++ .++++++++..+..+...+. ...++.+..+|+..++++
T Consensus 36 ~~i~~~Iv~~l~~~~~~--~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l~~~~~ 111 (295)
T 3gru_A 36 KNFVNKAVESANLTKDD--VVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDALKVDLN 111 (295)
T ss_dssp HHHHHHHHHHTTCCTTC--EEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTTTSCGG
T ss_pred HHHHHHHHHhcCCCCcC--EEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchhhCCcc
Confidence 34567777777665544 9999999999999999987 46777777755554443332 235788999999999988
Q ss_pred CCCeeEEEecccc
Q 006633 280 SRAFDMAHCSRCL 292 (637)
Q Consensus 280 d~sFDlV~~s~~L 292 (637)
+.+||.|+++..+
T Consensus 112 ~~~fD~Iv~NlPy 124 (295)
T 3gru_A 112 KLDFNKVVANLPY 124 (295)
T ss_dssp GSCCSEEEEECCG
T ss_pred cCCccEEEEeCcc
Confidence 8889999988654
No 370
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.21 E-value=4.7e-06 Score=89.42 Aligned_cols=103 Identities=18% Similarity=0.206 Sum_probs=67.8
Q ss_pred CCEEEEECCCCchHHHHHhhc-------------------CCEEEEcCccccHHHHHHHHHH------------c--CCC
Q 006633 219 IRTAIDTGCGVASWGAYLMSR-------------------NILAVSFAPRDTHEAQVQFALE------------R--GVP 265 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~-------------------~v~~vdisp~Dls~a~i~~A~e------------r--g~~ 265 (637)
..+|+|+|||+|..+..+... .+..-|+...|.+.-....... . +..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 468999999999888776221 2445577777765443322210 0 011
Q ss_pred eEEEEe-ccccCCCCCCCeeEEEeccccccCCcC-------------------------------------CHHHHHHHH
Q 006633 266 ALIGVM-ASIRLPYPSRAFDMAHCSRCLIPWGQY-------------------------------------ADGLYLIEV 307 (637)
Q Consensus 266 ~~~~~~-d~~~Lpfpd~sFDlV~~s~~L~h~~~~-------------------------------------d~~~~L~ei 307 (637)
....+. ....-.||+++||+|+++.+| ||... |...+|+..
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aL-HWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSL-HWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCT-TBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEeccee-eeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222 233445899999999999999 88652 223468888
Q ss_pred HhcccCCeEEEEEeC
Q 006633 308 DRVLRPGGYWILSGP 322 (637)
Q Consensus 308 ~RvLKPGG~Lvls~p 322 (637)
.|.|+|||.++++..
T Consensus 212 a~eL~pGG~mvl~~~ 226 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCL 226 (374)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHhCCCCEEEEEEe
Confidence 999999999999865
No 371
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.21 E-value=1.5e-06 Score=85.07 Aligned_cols=129 Identities=18% Similarity=0.205 Sum_probs=83.1
Q ss_pred ceeEeeecccchhhhhhhcCC-C-eEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCCC-----Cccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-P-LWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-----RTYD 542 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~-v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~yp-----~t~D 542 (637)
..+|||+|||.|.++.+|++. + - ..|+.+|.++.++..+.++ |+ +-+++ |..+.+..++ .+||
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKD--GTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYD 142 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTT--CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCC--CEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCcc
Confidence 458999999999999999875 1 1 2455666666777777665 54 22222 3333333333 7899
Q ss_pred eeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH------------HHHHHHHH----HHhcCCceeEEeccCC
Q 006633 543 LIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV------------DILVKIKS----ITDGMEWEGRIADHEN 606 (637)
Q Consensus 543 l~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~------------~~~~~~~~----~~~~~~W~~~~~~~e~ 606 (637)
+|.+++. .-....++-++-|+|||||++++.|-. .....+++ +...-+|+..+...
T Consensus 143 ~v~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~-- 214 (225)
T 3tr6_A 143 LIYIDAD------KANTDLYYEESLKLLREGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILIPI-- 214 (225)
T ss_dssp EEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEECS--
T ss_pred EEEECCC------HHHHHHHHHHHHHhcCCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEEEc--
Confidence 9987542 234678899999999999999997432 11223333 34444676666522
Q ss_pred CCCCcceEEEEEec
Q 006633 607 GPRQREKILFANKK 620 (637)
Q Consensus 607 ~~~~~~~~l~~~K~ 620 (637)
.+.+++++|+
T Consensus 215 ----~dG~~~~~k~ 224 (225)
T 3tr6_A 215 ----GDGLTLARKK 224 (225)
T ss_dssp ----TTCEEEEEEC
T ss_pred ----CCccEEEEEC
Confidence 4568888874
No 372
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.20 E-value=5.7e-07 Score=84.66 Aligned_cols=99 Identities=18% Similarity=0.225 Sum_probs=69.6
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCCCCccceeeeccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYPRTYDLIHADSI 549 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~yp~t~Dl~H~~~l 549 (637)
..+|||+|||.|.++.+|++++. -+|+.+|.++.++..+.++ |+ +-+++ |+.+.+...+..||+|.++..
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~ 109 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRGM--SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPP 109 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCS
T ss_pred CCeEEEeCCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCC
Confidence 56899999999999999988754 4677778877788877654 33 22222 333333334578999999766
Q ss_pred cccCCCCcCHHHHHHHHh--hcccCCcEEEEEeCH
Q 006633 550 FSLYKDRCEMEDVLLEMD--RILRPEGSVIIRDDV 582 (637)
Q Consensus 550 fs~~~~~c~~~~~l~e~d--RiLrPgG~~i~~d~~ 582 (637)
|.. ...+.++.++. |+|+|||.+++....
T Consensus 110 ~~~----~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 110 YAK----ETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp SHH----HHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCc----chHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 531 23466677776 999999999997543
No 373
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.20 E-value=1.5e-06 Score=87.05 Aligned_cols=116 Identities=17% Similarity=0.169 Sum_probs=76.5
Q ss_pred CceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----------cc--cchhh-ccccccCC-CC-Cc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----------GL--IGTYQ-NWCEAMST-YP-RT 540 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----------gl--~~~~~-~wce~~~~-yp-~t 540 (637)
.-..|||+|||+|.++.+|++. +- .+|+.+|.++.++..+.++ |+ +-+++ |.-+.+.. +| .+
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~--~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~ 123 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPD--TLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQ 123 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTT--SEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTC
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCC--CeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcC
Confidence 3568999999999999999865 22 3677778887888877543 33 22332 22121221 44 89
Q ss_pred cceeeecccccc-------CCCCcCHHHHHHHHhhcccCCcEEEEE-eCHHHHHHHHHHHhcCC
Q 006633 541 YDLIHADSIFSL-------YKDRCEMEDVLLEMDRILRPEGSVIIR-DDVDILVKIKSITDGME 596 (637)
Q Consensus 541 ~Dl~H~~~lfs~-------~~~~c~~~~~l~e~dRiLrPgG~~i~~-d~~~~~~~~~~~~~~~~ 596 (637)
||.|.+. |.. .+.|...+.+|-++-|+|||||.+++. |..+....+.+.+....
T Consensus 124 ~D~v~~~--~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~~~~~~~~~~l~~~~ 185 (235)
T 3ckk_A 124 LTKMFFL--FPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDVLELHDWMCTHFEEHP 185 (235)
T ss_dssp EEEEEEE--SCC-----------CCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHTST
T ss_pred eeEEEEe--CCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHHHHHCC
Confidence 9998752 321 122333468999999999999999985 76677777777655543
No 374
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.20 E-value=1.7e-06 Score=81.48 Aligned_cols=131 Identities=15% Similarity=0.117 Sum_probs=83.3
Q ss_pred CCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc--cchhhccccccCC--CC-Cccceeeecccc
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL--IGTYQNWCEAMST--YP-RTYDLIHADSIF 550 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl--~~~~~~wce~~~~--yp-~t~Dl~H~~~lf 550 (637)
+....|||++||. | .+|.++.++..+.+|-- +...+.=.+.+.. +| .+||+|.+..++
T Consensus 11 ~~g~~vL~~~~g~----------------v-~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 11 SAGQFVAVVWDKS----------------S-PVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVP 73 (176)
T ss_dssp CTTSEEEEEECTT----------------S-CHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCST
T ss_pred CCCCEEEEecCCc----------------e-eeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChh
Confidence 4478999999985 1 26777789998888731 2222211123333 44 899999997666
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEeCHH----------HHHHHHHHHhcCCceeEEeccCCCCCC----------
Q 006633 551 SLYKDRCEMEDVLLEMDRILRPEGSVIIRDDVD----------ILVKIKSITDGMEWEGRIADHENGPRQ---------- 610 (637)
Q Consensus 551 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~----------~~~~~~~~~~~~~W~~~~~~~e~~~~~---------- 610 (637)
... ..+.+.+|-|+-|+|||||++++.+... ....+.+.++.-.+ +.+.+....+..
T Consensus 74 ~~~--~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~~~~~~~~~~~~~~~~~~~~~ 150 (176)
T 2ld4_A 74 GST--TLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VEVKELQREPLTPEEVQSVREH 150 (176)
T ss_dssp TCC--CCCCHHHHHHHHHHEEEEEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EEEEEEEEECCCHHHHHHHHHH
T ss_pred hhc--ccCHHHHHHHHHHHCCCCEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cEeecCcccCCCHHHHHHHHHH
Confidence 543 1345899999999999999999975321 14556666555444 433332211111
Q ss_pred --------cceEEEEEecCCCCCC
Q 006633 611 --------REKILFANKKYWTAPA 626 (637)
Q Consensus 611 --------~~~~l~~~K~~w~~~~ 626 (637)
.-.+++++|+-|..++
T Consensus 151 ~g~~~~~~~~~~~~a~Kp~~~~gs 174 (176)
T 2ld4_A 151 LGHESDNLLFVQITGKKPNFEVGS 174 (176)
T ss_dssp TCCCCSSEEEEEEEEECCCSSCCS
T ss_pred hcccCCceEEEEEeccCCcccccC
Confidence 1458899999887654
No 375
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.17 E-value=4.1e-06 Score=86.97 Aligned_cols=87 Identities=13% Similarity=-0.001 Sum_probs=60.2
Q ss_pred CCEEEEECCCC------chHHHHHhhc-----CCEEEEcCccccHHHHHHHHHHcCCCeEE-EEeccccCCCCCCCeeEE
Q 006633 219 IRTAIDTGCGV------ASWGAYLMSR-----NILAVSFAPRDTHEAQVQFALERGVPALI-GVMASIRLPYPSRAFDMA 286 (637)
Q Consensus 219 ~r~VLDIGCGt------G~~a~~La~~-----~v~~vdisp~Dls~a~i~~A~erg~~~~~-~~~d~~~Lpfpd~sFDlV 286 (637)
+.+|||+|||+ |+ ..++++ .++++|+++. + ..+.+ .++|...++++ ++||+|
T Consensus 64 g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v------------~~v~~~i~gD~~~~~~~-~~fD~V 127 (290)
T 2xyq_A 64 NMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V------------SDADSTLIGDCATVHTA-NKWDLI 127 (290)
T ss_dssp TCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B------------CSSSEEEESCGGGCCCS-SCEEEE
T ss_pred CCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C------------CCCEEEEECccccCCcc-CcccEE
Confidence 44999999954 65 223322 3677888764 1 24566 78888887765 689999
Q ss_pred EeccccccCC----------cCCHHHHHHHHHhcccCCeEEEEEeC
Q 006633 287 HCSRCLIPWG----------QYADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 287 ~~s~~L~h~~----------~~d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
+|+... ++. .+....+++++.|+|||||.|++...
T Consensus 128 vsn~~~-~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 128 ISDMYD-PRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp EECCCC-CC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEcCCc-cccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 997532 211 00235789999999999999999764
No 376
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.17 E-value=7.6e-07 Score=92.12 Aligned_cols=103 Identities=12% Similarity=0.024 Sum_probs=72.4
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc-------------cchhhccccccC---CC---C
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-------------IGTYQNWCEAMS---TY---P 538 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-------------~~~~~~wce~~~---~y---p 538 (637)
..+|||+|||.|.++..|.+.+. -+|+.+|.++.++..+.++-- +..++.=++.+. .+ +
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGRI--NKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCEEEEECCCCcHHHHHHHhcCC--CEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 56899999999999999987653 366777887788888877621 122221122222 24 2
Q ss_pred CccceeeeccccccC-CCCcCHHHHHHHHhhcccCCcEEEEEeCH
Q 006633 539 RTYDLIHADSIFSLY-KDRCEMEDVLLEMDRILRPEGSVIIRDDV 582 (637)
Q Consensus 539 ~t~Dl~H~~~lfs~~-~~~c~~~~~l~e~dRiLrPgG~~i~~d~~ 582 (637)
.+||+|-+..++... .+.-+...+|-++-|+|||||.++++...
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence 599999987665432 33344578999999999999999998543
No 377
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.16 E-value=3e-06 Score=88.93 Aligned_cols=97 Identities=18% Similarity=0.192 Sum_probs=68.8
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhhccccccCCCC-Cccceeeeccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQNWCEAMSTYP-RTYDLIHADSI 549 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~~wce~~~~yp-~t~Dl~H~~~l 549 (637)
..+|||+|||.|.++..+++.+. -.|+.+|.+ .++..+.++ |+ |-+++.-.+.+ .+| ..||+|.+..+
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~--~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~Ivs~~~ 114 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGA--KHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDV-HLPFPKVDIIISEWM 114 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCC--SEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTS-CCSSSCEEEEEECCC
T ss_pred CCEEEEecCccHHHHHHHHHCCC--CEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhc-cCCCCcccEEEEeCc
Confidence 46899999999999999887753 245566666 566665554 54 33333111222 355 89999999776
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEE
Q 006633 550 FSLYKDRCEMEDVLLEMDRILRPEGSVII 578 (637)
Q Consensus 550 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~ 578 (637)
+......-.++.+|.+++|+|+|||.+++
T Consensus 115 ~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 115 GYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp BTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred hhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 55444556778999999999999999983
No 378
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.16 E-value=1.2e-06 Score=83.71 Aligned_cols=123 Identities=15% Similarity=0.161 Sum_probs=78.2
Q ss_pred chhhHHHHHHHHHHHHHhhhccCCCCCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc--c
Q 006633 451 FREDTALWKKRVTYYKSVDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--I 524 (637)
Q Consensus 451 f~~d~~~w~~~v~~y~~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--~ 524 (637)
+...++...+.+-.+.... .. ....+|||+|||+|.++.++++.+. -.|+.+|.++.++..+.++ |+ +
T Consensus 22 ~rp~~~~~~~~l~~~l~~~---~~-~~~~~vLDlgcG~G~~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v 95 (189)
T 3p9n_A 22 TRPTTDRVRESLFNIVTAR---RD-LTGLAVLDLYAGSGALGLEALSRGA--ASVLFVESDQRSAAVIARNIEALGLSGA 95 (189)
T ss_dssp C---CHHHHHHHHHHHHHH---SC-CTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEECCHHHHHHHHHHHHHHTCSCE
T ss_pred CccCcHHHHHHHHHHHHhc---cC-CCCCEEEEeCCCcCHHHHHHHHCCC--CeEEEEECCHHHHHHHHHHHHHcCCCce
Confidence 4444455555554333211 11 2346899999999999997777653 2466677777788777664 43 2
Q ss_pred chhh-ccccccCCC-CCccceeeeccccccCCCCcCHHHHHHHHhh--cccCCcEEEEEeC
Q 006633 525 GTYQ-NWCEAMSTY-PRTYDLIHADSIFSLYKDRCEMEDVLLEMDR--ILRPEGSVIIRDD 581 (637)
Q Consensus 525 ~~~~-~wce~~~~y-p~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dR--iLrPgG~~i~~d~ 581 (637)
-+++ |+.+....+ +.+||+|-++..|... .-+++.++.++-| +|+|||.+++...
T Consensus 96 ~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~--~~~~~~~l~~~~~~~~L~pgG~l~~~~~ 154 (189)
T 3p9n_A 96 TLRRGAVAAVVAAGTTSPVDLVLADPPYNVD--SADVDAILAALGTNGWTREGTVAVVERA 154 (189)
T ss_dssp EEEESCHHHHHHHCCSSCCSEEEECCCTTSC--HHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred EEEEccHHHHHhhccCCCccEEEECCCCCcc--hhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence 2333 322222224 4899999987665432 1456789999998 9999999999754
No 379
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.15 E-value=8.6e-07 Score=87.07 Aligned_cols=133 Identities=14% Similarity=0.122 Sum_probs=84.1
Q ss_pred ceeEeeecccchhhhhhhcCC---CeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCCC-----Ccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDD---PLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-----RTY 541 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~---~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~yp-----~t~ 541 (637)
.++|||+|||.|.++.+|++. +. .|+.+|.++.++..+.++ |+ +-+++ |..+.+..++ .+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGA---RLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTC---EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCC---EEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 578999999999999999873 22 455667666788777663 54 33333 4334444454 689
Q ss_pred ceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-----HHHHHHHHHHHhcCCceeEEecc-CCCCCCcceEE
Q 006633 542 DLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-----VDILVKIKSITDGMEWEGRIADH-ENGPRQREKIL 615 (637)
Q Consensus 542 Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-----~~~~~~~~~~~~~~~W~~~~~~~-e~~~~~~~~~l 615 (637)
|+|.+++....+. ....++.++ |+|||||.+++.|- .+.+..++ ..=.++...+.. .......+.+.
T Consensus 136 D~V~~d~~~~~~~---~~~~~~~~~-~~LkpgG~lv~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~dG~~ 208 (221)
T 3u81_A 136 DMVFLDHWKDRYL---PDTLLLEKC-GLLRKGTVLLADNVIVPGTPDFLAYVR---GSSSFECTHYSSYLEYMKVVDGLE 208 (221)
T ss_dssp SEEEECSCGGGHH---HHHHHHHHT-TCCCTTCEEEESCCCCCCCHHHHHHHH---HCTTEEEEEEEEEETTTTEEEEEE
T ss_pred EEEEEcCCcccch---HHHHHHHhc-cccCCCeEEEEeCCCCcchHHHHHHHh---hCCCceEEEcccccccCCCCCceE
Confidence 9999876554432 123566677 99999999999753 23433333 334566655431 11122457888
Q ss_pred EEEec
Q 006633 616 FANKK 620 (637)
Q Consensus 616 ~~~K~ 620 (637)
+++++
T Consensus 209 ~~~~~ 213 (221)
T 3u81_A 209 KAIYQ 213 (221)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 88775
No 380
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.13 E-value=4.5e-06 Score=88.26 Aligned_cols=141 Identities=19% Similarity=0.182 Sum_probs=89.4
Q ss_pred CCceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhh----cccchhhccc-cccCCCCCccceeeecc
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWC-EAMSTYPRTYDLIHADS 548 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gl~~~~~~wc-e~~~~yp~t~Dl~H~~~ 548 (637)
....+|||+|||.|.++.+|.+. ++ .++.+|. +.++..+.++ |+-+-+.-.+ ..+...|..||+|.+.+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~---~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~~~~ 256 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHL---RGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLPVTADVVLLSF 256 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTC---EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCEEEEEEES
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCC---EEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCCCEEEEec
Confidence 45689999999999999999765 23 3444555 4677776653 4421111111 22334676699999988
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC--H--H-----------------------HHHHHHHHHhcCCceeEE
Q 006633 549 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD--V--D-----------------------ILVKIKSITDGMEWEGRI 601 (637)
Q Consensus 549 lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~--~--~-----------------------~~~~~~~~~~~~~W~~~~ 601 (637)
++-.+.+. ....+|-++-|+|||||+++|.|. . + ....++++++.-.++...
T Consensus 257 vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~ 335 (374)
T 1qzz_A 257 VLLNWSDE-DALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALAS 335 (374)
T ss_dssp CGGGSCHH-HHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEE
T ss_pred cccCCCHH-HHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEE
Confidence 87654322 224899999999999999999876 2 1 234556677777777653
Q ss_pred eccCCCCC--CcceEEEEEecC
Q 006633 602 ADHENGPR--QREKILFANKKY 621 (637)
Q Consensus 602 ~~~e~~~~--~~~~~l~~~K~~ 621 (637)
...-.+.. -...++.++|+=
T Consensus 336 ~~~~~~~~~~~~~~~i~~~~~~ 357 (374)
T 1qzz_A 336 ERTSGSTTLPFDFSILEFTAVS 357 (374)
T ss_dssp EEEECCSSCSSCEEEEEEEECC
T ss_pred EEECCCCcccCCcEEEEEEECc
Confidence 32222221 012788888853
No 381
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.11 E-value=5.3e-06 Score=76.47 Aligned_cols=130 Identities=15% Similarity=0.158 Sum_probs=75.6
Q ss_pred ceeEeeecccchhhhhhhcCC-----CeEEEEeccCCCCcchhHHHHhhcccchhh-ccccccC------C-CC-Cccce
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-----PLWVMNTVPVEAKINTLGVIYERGLIGTYQ-NWCEAMS------T-YP-RTYDL 543 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-----~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~-~wce~~~------~-yp-~t~Dl 543 (637)
..+|||+|||.|.++.+|++. .|+.+-+.+ ++.. .. +...+ |+.+ +. . ++ .+||+
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~------~~~~---~~-~~~~~~d~~~-~~~~~~~~~~~~~~~~D~ 91 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP------MDPI---VG-VDFLQGDFRD-ELVMKALLERVGDSKVQV 91 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC------CCCC---TT-EEEEESCTTS-HHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc------cccc---Cc-EEEEEccccc-chhhhhhhccCCCCceeE
Confidence 569999999999999998764 233433333 2211 11 12222 2221 11 0 44 78999
Q ss_pred eeeccccccCCCC--c------CHHHHHHHHhhcccCCcEEEEEeCH-HHHHHHHHHHhcCCceeEE-e-ccCCCCCCcc
Q 006633 544 IHADSIFSLYKDR--C------EMEDVLLEMDRILRPEGSVIIRDDV-DILVKIKSITDGMEWEGRI-A-DHENGPRQRE 612 (637)
Q Consensus 544 ~H~~~lfs~~~~~--c------~~~~~l~e~dRiLrPgG~~i~~d~~-~~~~~~~~~~~~~~W~~~~-~-~~e~~~~~~~ 612 (637)
|.++..+...... - ....+|.++-|+|||||.+++.... .....+.+..+. .|+... . .........|
T Consensus 92 i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 170 (180)
T 1ej0_A 92 VMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYLREIRS-LFTKVKVRKPDSSRARSRE 170 (180)
T ss_dssp EEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHHHHHHH-HEEEEEEECCTTSCTTCCE
T ss_pred EEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHHHHHHH-hhhhEEeecCCcccccCce
Confidence 9998776543221 0 0158899999999999999997432 223334443333 255432 2 2222333568
Q ss_pred eEEEEEe
Q 006633 613 KILFANK 619 (637)
Q Consensus 613 ~~l~~~K 619 (637)
..+++++
T Consensus 171 ~~~~~~~ 177 (180)
T 1ej0_A 171 VYIVATG 177 (180)
T ss_dssp EEEEEEE
T ss_pred EEEEEcc
Confidence 8888876
No 382
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.09 E-value=1.4e-06 Score=84.76 Aligned_cols=99 Identities=12% Similarity=0.140 Sum_probs=69.7
Q ss_pred eeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc----cchhh-ccccccCCC-CCc-cceeeec
Q 006633 479 RNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL----IGTYQ-NWCEAMSTY-PRT-YDLIHAD 547 (637)
Q Consensus 479 r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl----~~~~~-~wce~~~~y-p~t-~Dl~H~~ 547 (637)
.+|||+|||+|.++.+++.++. -.|+.+|.++.++..+.++ |+ +-+++ |..+..... +.+ ||+|-++
T Consensus 55 ~~vLDlGcGtG~~~~~~~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 55 SECLDGFAGSGSLGFEALSRQA--KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp CEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CeEEEcCCccCHHHHHHHHccC--CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 5899999999999998766653 3567778887888887764 33 22232 222222223 478 9999987
Q ss_pred cccccCCCCcCHHHHHHHH--hhcccCCcEEEEEeCHH
Q 006633 548 SIFSLYKDRCEMEDVLLEM--DRILRPEGSVIIRDDVD 583 (637)
Q Consensus 548 ~lfs~~~~~c~~~~~l~e~--dRiLrPgG~~i~~d~~~ 583 (637)
..|. .-..+.++-++ -|+|||||.+++.....
T Consensus 133 ~~~~----~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 133 PPFH----FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp CCSS----SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred CCCC----CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 7754 23567888888 78999999999976543
No 383
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.09 E-value=4.5e-06 Score=85.00 Aligned_cols=111 Identities=11% Similarity=0.066 Sum_probs=76.8
Q ss_pred CCceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhh-----cc--cchhh-ccccccCCCC-Ccccee
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER-----GL--IGTYQ-NWCEAMSTYP-RTYDLI 544 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR-----gl--~~~~~-~wce~~~~yp-~t~Dl~ 544 (637)
....+|||+|||.|+++.+|++. +- ..|+.+|.++..+..+.++ |+ +-+++ |..+ .+| .+||+|
T Consensus 109 ~~~~~VLD~G~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~---~~~~~~fD~V 183 (275)
T 1yb2_A 109 RPGMDILEVGVGSGNMSSYILYALNGK--GTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD---FISDQMYDAV 183 (275)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHTTS--SEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT---CCCSCCEEEE
T ss_pred CCcCEEEEecCCCCHHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc---cCcCCCccEE
Confidence 44679999999999999999765 21 2456667776788877766 53 22222 3322 344 789998
Q ss_pred eeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCHH-HHHHHHHHHhcCCcee
Q 006633 545 HADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDVD-ILVKIKSITDGMEWEG 599 (637)
Q Consensus 545 H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~-~~~~~~~~~~~~~W~~ 599 (637)
-+ +--+...+|-++-|+|||||.+++.+... ....+.+.++...|..
T Consensus 184 i~--------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~l~~~Gf~~ 231 (275)
T 1yb2_A 184 IA--------DIPDPWNHVQKIASMMKPGSVATFYLPNFDQSEKTVLSLSASGMHH 231 (275)
T ss_dssp EE--------CCSCGGGSHHHHHHTEEEEEEEEEEESSHHHHHHHHHHSGGGTEEE
T ss_pred EE--------cCcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCeE
Confidence 77 22344689999999999999999987643 5566666666555544
No 384
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.09 E-value=1.1e-05 Score=79.07 Aligned_cols=132 Identities=13% Similarity=0.066 Sum_probs=75.0
Q ss_pred CceeEeeecccchhhhhhhcCC--C-eEEEEeccCCCCcchhHHHHhhc----ccchhh-cccc--ccCCCCCccceeee
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD--P-LWVMNTVPVEAKINTLGVIYERG----LIGTYQ-NWCE--AMSTYPRTYDLIHA 546 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~--~-v~~mnv~~~~~~~~~l~~~~eRg----l~~~~~-~wce--~~~~yp~t~Dl~H~ 546 (637)
...+|||+|||.|.++.+|++. + - .|+.+|.++.++..+.++- -+-.++ |..+ .+...+.+||+|-+
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~---~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEG---KIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCe---EEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEE
Confidence 4568999999999999998754 1 2 3344455555555443321 122222 3222 11234578999887
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH---------H--HHHHHHHHHhcCCceeEE-eccCCCCC-Ccce
Q 006633 547 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV---------D--ILVKIKSITDGMEWEGRI-ADHENGPR-QREK 613 (637)
Q Consensus 547 ~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~---------~--~~~~~~~~~~~~~W~~~~-~~~e~~~~-~~~~ 613 (637)
+.. ..-....+|.++-|+|||||++++.-.. . ....++++ ..- ++... .+.+ +. ...-
T Consensus 150 ~~~-----~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~~~--~~~~~~~ 220 (227)
T 1g8a_A 150 DVA-----QPTQAKILIDNAEVYLKRGGYGMIAVKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLNLE--PYEKDHA 220 (227)
T ss_dssp CCC-----STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEECT--TTSSSEE
T ss_pred CCC-----CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEeccC--cccCCCE
Confidence 543 1112235599999999999999995211 1 11455555 333 66543 2322 22 2345
Q ss_pred EEEEEec
Q 006633 614 ILFANKK 620 (637)
Q Consensus 614 ~l~~~K~ 620 (637)
+++++|+
T Consensus 221 ~~~~~~~ 227 (227)
T 1g8a_A 221 LFVVRKT 227 (227)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 7777763
No 385
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.08 E-value=1.9e-06 Score=85.66 Aligned_cols=99 Identities=14% Similarity=0.037 Sum_probs=59.0
Q ss_pred CceeEeeecccchhhhhhhcCC-CeEEEEeccCCCC-cchhHHH---H----hhcccchhhccccccCCCC----Cccce
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAK-INTLGVI---Y----ERGLIGTYQNWCEAMSTYP----RTYDL 543 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~-~~~l~~~---~----eRgl~~~~~~wce~~~~yp----~t~Dl 543 (637)
....|||+|||.|.++.+|++. +- .+|+.+|.+ +.+++.+ . ++|+..+. --+.....+| ..+|.
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~--~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~-~~~~d~~~l~~~~~d~v~~ 100 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQN--TFYIGIDPVKENLFDISKKIIKKPSKGGLSNVV-FVIAAAESLPFELKNIADS 100 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTT--EEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEE-EECCBTTBCCGGGTTCEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeE-EEEcCHHHhhhhccCeEEE
Confidence 3678999999999999999832 22 356777777 5666665 3 33552211 0112223334 33444
Q ss_pred eeecccccc--CCCCcCHHHHHHHHhhcccCCcEEEE
Q 006633 544 IHADSIFSL--YKDRCEMEDVLLEMDRILRPEGSVII 578 (637)
Q Consensus 544 ~H~~~lfs~--~~~~c~~~~~l~e~dRiLrPgG~~i~ 578 (637)
++++--+.. ...+-+.+.+|.|+-|+|||||.++|
T Consensus 101 i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 101 ISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 444211110 01112335789999999999999999
No 386
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.08 E-value=7.6e-07 Score=82.64 Aligned_cols=97 Identities=12% Similarity=0.158 Sum_probs=66.9
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc-cchhh-ccccccCCCC---Cccceeeecc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQ-NWCEAMSTYP---RTYDLIHADS 548 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-~~~~~-~wce~~~~yp---~t~Dl~H~~~ 548 (637)
..+|||+|||+|.++.+|++... +|+.+|.++.++..+.++ |+ +-+++ |+.+.....+ .+||+|.++.
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 46899999999999999988754 277778877788777654 32 22222 3322222222 3899999988
Q ss_pred ccccCCCCcCHHHHHHHHh--hcccCCcEEEEEeCH
Q 006633 549 IFSLYKDRCEMEDVLLEMD--RILRPEGSVIIRDDV 582 (637)
Q Consensus 549 lfs~~~~~c~~~~~l~e~d--RiLrPgG~~i~~d~~ 582 (637)
.|. . ..+.++.++- |+|+|||.+++....
T Consensus 119 ~~~--~---~~~~~~~~~~~~~~L~~gG~~~~~~~~ 149 (171)
T 1ws6_A 119 PYA--M---DLAALFGELLASGLVEAGGLYVLQHPK 149 (171)
T ss_dssp CTT--S---CTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred CCc--h---hHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence 776 2 3456666666 999999999997543
No 387
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.07 E-value=1.1e-05 Score=80.32 Aligned_cols=110 Identities=15% Similarity=0.097 Sum_probs=75.9
Q ss_pred CceeEeeecccchhhhhhhcCC---CeEEEEeccCCCCcchhHHHHhh-----cc--cchhh-ccccccCCCC-Ccccee
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD---PLWVMNTVPVEAKINTLGVIYER-----GL--IGTYQ-NWCEAMSTYP-RTYDLI 544 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~---~v~~mnv~~~~~~~~~l~~~~eR-----gl--~~~~~-~wce~~~~yp-~t~Dl~ 544 (637)
...+|||+|||.|.++.+|++. .. +|+.+|.++.++..+.++ |. +-+.+ |..+. ++| .+||+|
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~--~~~~~~~D~v 170 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKG---LVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA--ELEEAAYDGV 170 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTS---EEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC--CCCTTCEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCC---EEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc--CCCCCCcCEE
Confidence 3669999999999999998765 22 455556666788887776 52 22222 33322 255 789998
Q ss_pred eeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH-HHHHHHHHHHhcCCcee
Q 006633 545 HADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV-DILVKIKSITDGMEWEG 599 (637)
Q Consensus 545 H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~-~~~~~~~~~~~~~~W~~ 599 (637)
-++ --+...+|-++.|+|+|||.+++.... +.+.++.+.++...|..
T Consensus 171 ~~~--------~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~gf~~ 218 (258)
T 2pwy_A 171 ALD--------LMEPWKVLEKAALALKPDRFLVAYLPNITQVLELVRAAEAHPFRL 218 (258)
T ss_dssp EEE--------SSCGGGGHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHTTTTEEE
T ss_pred EEC--------CcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 872 234458899999999999999998764 35666666666665543
No 388
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.07 E-value=4.6e-06 Score=87.07 Aligned_cols=139 Identities=16% Similarity=0.171 Sum_probs=89.1
Q ss_pred ccCCCCCceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhh----cccchhhccc-cccCCCCCccce
Q 006633 471 QLAQPGRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWC-EAMSTYPRTYDL 543 (637)
Q Consensus 471 ~l~~~~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gl~~~~~~wc-e~~~~yp~t~Dl 543 (637)
.+.. ....+|||+|||.|.++.+|++. ++ .++..|. +.++..+.++ |+-+-+.-.+ ..+.++|..||+
T Consensus 164 ~~~~-~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~ 238 (332)
T 3i53_A 164 KYDW-AALGHVVDVGGGSGGLLSALLTAHEDL---SGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGG 238 (332)
T ss_dssp SSCC-GGGSEEEEETCTTSHHHHHHHHHCTTC---EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSE
T ss_pred hCCC-CCCCEEEEeCCChhHHHHHHHHHCCCC---eEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcE
Confidence 3444 56789999999999999999763 33 2233355 4677766654 5522111111 223556778999
Q ss_pred eeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH----------H------------HHHHHHHHHhcCCceeEE
Q 006633 544 IHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV----------D------------ILVKIKSITDGMEWEGRI 601 (637)
Q Consensus 544 ~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~----------~------------~~~~~~~~~~~~~W~~~~ 601 (637)
|.+.+++-.+.+. ....+|-++-|+|||||+++|.|.. + ....++++++.-.++..-
T Consensus 239 v~~~~vlh~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 317 (332)
T 3i53_A 239 YVLSAVLHDWDDL-SAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRA 317 (332)
T ss_dssp EEEESCGGGSCHH-HHHHHHHHHHHHHTTTCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEE
T ss_pred EEEehhhccCCHH-HHHHHHHHHHHhcCCCCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEE
Confidence 9998887655432 3468999999999999999997641 0 134566666666666653
Q ss_pred eccCCCCCCcceEEEEEe
Q 006633 602 ADHENGPRQREKILFANK 619 (637)
Q Consensus 602 ~~~e~~~~~~~~~l~~~K 619 (637)
...-. + ..|+.++|
T Consensus 318 ~~~~~-~---~~vie~r~ 331 (332)
T 3i53_A 318 AHPIS-Y---VSIVEMTA 331 (332)
T ss_dssp EEECS-S---SEEEEEEE
T ss_pred EEECC-C---cEEEEEee
Confidence 33221 1 56777765
No 389
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.07 E-value=6e-06 Score=80.14 Aligned_cols=94 Identities=16% Similarity=0.111 Sum_probs=64.5
Q ss_pred ceeEeeecccchhhhhhhcCC-C-eEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCCCCccceeeec
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-P-LWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYPRTYDLIHAD 547 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~-v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~yp~t~Dl~H~~ 547 (637)
..+|||+|||.|.++.+|++. + - -.|+.+|.++.++..+.++ |+ +-+++ |..+.+...+. ||+|.++
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~ 133 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISIS--SRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMD 133 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTT--CEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEc
Confidence 468999999999999999765 1 1 2445556666677776643 44 22222 33233344457 9999875
Q ss_pred cccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 548 SIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 548 ~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
. .....+.+|-++-|+|||||.+++.+
T Consensus 134 ~------~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 134 C------DVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp T------TTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred C------ChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 2 23466889999999999999999854
No 390
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.07 E-value=5.1e-06 Score=86.59 Aligned_cols=104 Identities=15% Similarity=0.232 Sum_probs=71.2
Q ss_pred hhhccCCCCCceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----cc---cchh-hccccccCCCC
Q 006633 468 VDYQLAQPGRYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL---IGTY-QNWCEAMSTYP 538 (637)
Q Consensus 468 ~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~-~~wce~~~~yp 538 (637)
++..+.. .. .+|||+|||.|.++.+|++. |- ..++..|. +.++..+.++ |+ +... +|. +..+|
T Consensus 160 ~~~~~~~-~~-~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~---~~~~~ 231 (334)
T 2ip2_A 160 IPRLLDF-RG-RSFVDVGGGSGELTKAILQAEPS--ARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDM---LQEVP 231 (334)
T ss_dssp HHHHSCC-TT-CEEEEETCTTCHHHHHHHHHCTT--CEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCT---TTCCC
T ss_pred HHHhCCC-CC-CEEEEeCCCchHHHHHHHHHCCC--CEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCC---CCCCC
Confidence 3333444 44 89999999999999999764 21 13444455 4677776654 33 2222 232 33567
Q ss_pred CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 539 RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 539 ~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
..||+|.+..++..+.+. ....+|-++-|+|+|||+++|.|
T Consensus 232 ~~~D~v~~~~vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 232 SNGDIYLLSRIIGDLDEA-ASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp SSCSEEEEESCGGGCCHH-HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCEEEEchhccCCCHH-HHHHHHHHHHHhcCCCCEEEEEE
Confidence 889999998888655422 33589999999999999999985
No 391
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.06 E-value=8.5e-06 Score=85.50 Aligned_cols=143 Identities=15% Similarity=0.167 Sum_probs=90.2
Q ss_pred HhhhccCCCCC-ceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhh----cccc---hh-hccccccC
Q 006633 467 SVDYQLAQPGR-YRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GLIG---TY-QNWCEAMS 535 (637)
Q Consensus 467 ~~~~~l~~~~~-~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gl~~---~~-~~wce~~~ 535 (637)
.++..+.. .. ..+|||+|||.|.++.+|++. ++ .++-.|.+ .++..+.++ |+-. .. +|..+.-.
T Consensus 169 ~~l~~~~~-~~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 243 (352)
T 3mcz_A 169 DVVSELGV-FARARTVIDLAGGHGTYLAQVLRRHPQL---TGQIWDLP-TTRDAARKTIHAHDLGGRVEFFEKNLLDARN 243 (352)
T ss_dssp HHHHTCGG-GTTCCEEEEETCTTCHHHHHHHHHCTTC---EEEEEECG-GGHHHHHHHHHHTTCGGGEEEEECCTTCGGG
T ss_pred HHHHhCCC-cCCCCEEEEeCCCcCHHHHHHHHhCCCC---eEEEEECH-HHHHHHHHHHHhcCCCCceEEEeCCcccCcc
Confidence 44444444 34 789999999999999999764 33 22333443 566665543 5422 11 12222111
Q ss_pred CCCCccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH----------H-----------------HHHHH
Q 006633 536 TYPRTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV----------D-----------------ILVKI 588 (637)
Q Consensus 536 ~yp~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~----------~-----------------~~~~~ 588 (637)
..|..||+|.+.+++..+.+ -....+|-++-|+|||||.++|.|.. . ....+
T Consensus 244 ~~~~~~D~v~~~~vlh~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~ 322 (352)
T 3mcz_A 244 FEGGAADVVMLNDCLHYFDA-REAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWI 322 (352)
T ss_dssp GTTCCEEEEEEESCGGGSCH-HHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHH
T ss_pred cCCCCccEEEEecccccCCH-HHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHH
Confidence 15678999999888875532 23468999999999999999997520 0 12345
Q ss_pred HHHHhcCCceeEEeccCCCCCCcceEEEEEec
Q 006633 589 KSITDGMEWEGRIADHENGPRQREKILFANKK 620 (637)
Q Consensus 589 ~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~K~ 620 (637)
+++++.-.++..... .+...+++++|+
T Consensus 323 ~~ll~~aGf~~~~~~-----~g~~~l~~a~kp 349 (352)
T 3mcz_A 323 AGVVRDAGLAVGERS-----IGRYTLLIGQRS 349 (352)
T ss_dssp HHHHHHTTCEEEEEE-----ETTEEEEEEECC
T ss_pred HHHHHHCCCceeeec-----cCceEEEEEecC
Confidence 566666666655421 235778999986
No 392
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.05 E-value=1.9e-06 Score=83.27 Aligned_cols=94 Identities=14% Similarity=0.056 Sum_probs=66.2
Q ss_pred CCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc--cchhh-ccccccCCCCCccceeeecc
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTYPRTYDLIHADS 548 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~-~wce~~~~yp~t~Dl~H~~~ 548 (637)
....+|||+|||.|.++..|++.. -+|+.+|.++..+..+.++ |+ +.+.+ |..+.. .-+.+||+|.+++
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~~---~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~D~i~~~~ 151 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHLV---QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGW-QARAPFDAIIVTA 151 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-GGGCCEEEEEESS
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC---CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCC-ccCCCccEEEEcc
Confidence 346789999999999999998773 3566667777788887765 43 22222 222211 1137899999987
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH
Q 006633 549 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV 582 (637)
Q Consensus 549 lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~ 582 (637)
.+..... ++-|+|||||.+++.-..
T Consensus 152 ~~~~~~~---------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 152 APPEIPT---------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp BCSSCCT---------HHHHTEEEEEEEEEEECS
T ss_pred chhhhhH---------HHHHhcccCcEEEEEEcC
Confidence 7754443 688999999999997544
No 393
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.05 E-value=5.6e-06 Score=85.97 Aligned_cols=137 Identities=20% Similarity=0.276 Sum_probs=88.6
Q ss_pred CceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----cccchhhccccccC--CCCCccceeeeccc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMS--TYPRTYDLIHADSI 549 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl~~~~~~wce~~~--~yp~t~Dl~H~~~l 549 (637)
...+|||+|||.|.++.+|.+. +- ..++.+|.+ .++..+.++ |+-.-+.-.+..+. .+|..||+|.+.++
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~--~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~ 241 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPN--AEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNF 241 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTT--CEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESC
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCC--CeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcch
Confidence 3579999999999999999765 21 255666777 777777665 44221111112221 45666999999887
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEeCHH---------------------------HHHHHHHHHhcCCceeEEe
Q 006633 550 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDVD---------------------------ILVKIKSITDGMEWEGRIA 602 (637)
Q Consensus 550 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~---------------------------~~~~~~~~~~~~~W~~~~~ 602 (637)
+..+.+ -+...+|-++-|+|+|||+++|.|... ....++++++.-.++....
T Consensus 242 l~~~~~-~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGf~~~~~ 320 (335)
T 2r3s_A 242 LHHFDV-ATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNAGFSHSQL 320 (335)
T ss_dssp GGGSCH-HHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHTTCSEEEE
T ss_pred hccCCH-HHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHCCCCeeeE
Confidence 765532 234689999999999999999975310 1455666777777765543
Q ss_pred ccCCCCCCcceEEEEEec
Q 006633 603 DHENGPRQREKILFANKK 620 (637)
Q Consensus 603 ~~e~~~~~~~~~l~~~K~ 620 (637)
..-.+ ...+++++++
T Consensus 321 ~~~~~---~~~~i~~~~~ 335 (335)
T 2r3s_A 321 HSLPT---TQQQVIVAYK 335 (335)
T ss_dssp ECCTT---SSSEEEEEEC
T ss_pred EECCC---CceeEEEecC
Confidence 22222 3467777664
No 394
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.04 E-value=1.6e-05 Score=80.45 Aligned_cols=122 Identities=11% Similarity=0.080 Sum_probs=81.6
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh-------cc---cchhh-ccccccC-----CC-CC
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER-------GL---IGTYQ-NWCEAMS-----TY-PR 539 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR-------gl---~~~~~-~wce~~~-----~y-p~ 539 (637)
...+|||+|||.|.++..|+++.- ..+|+.+|.++.++..+.++ |+ +-+++ |..+... .+ +.
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 457899999999999998876520 14667777777777777653 33 22333 2222111 24 37
Q ss_pred ccceeeecccccc---------------CCCCcCHHHHHHHHhhcccCCcEEEEEeCHHHHHHHHHHHhcCCceeE
Q 006633 540 TYDLIHADSIFSL---------------YKDRCEMEDVLLEMDRILRPEGSVIIRDDVDILVKIKSITDGMEWEGR 600 (637)
Q Consensus 540 t~Dl~H~~~lfs~---------------~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~~~~~~~~~~~~~~~W~~~ 600 (637)
+||+|-++--|.. +...+.++.++-++-|+|+|||.+++--..+.+..+.+.++.- |...
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l~~~-~~~~ 189 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAACGSR-FGGL 189 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHHTTT-EEEE
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHHHhc-CCce
Confidence 8999999744321 2334678899999999999999999987777777777777664 6543
No 395
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.04 E-value=2.7e-06 Score=85.15 Aligned_cols=117 Identities=16% Similarity=0.178 Sum_probs=74.5
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh------------cc--cchhh-ccccccCC-CC-Cc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER------------GL--IGTYQ-NWCEAMST-YP-RT 540 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR------------gl--~~~~~-~wce~~~~-yp-~t 540 (637)
...|||+|||+|+|+.+|++..- -.+|+.+|.++.++..+.++ |+ +-+++ |..+.+.. ++ .+
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 57899999999999999876521 13566777776788777654 55 22222 22222222 44 77
Q ss_pred cceeeeccccccC-------CCCcCHHHHHHHHhhcccCCcEEEE-EeCHHHHHHHHHHHhcCCc
Q 006633 541 YDLIHADSIFSLY-------KDRCEMEDVLLEMDRILRPEGSVII-RDDVDILVKIKSITDGMEW 597 (637)
Q Consensus 541 ~Dl~H~~~lfs~~-------~~~c~~~~~l~e~dRiLrPgG~~i~-~d~~~~~~~~~~~~~~~~W 597 (637)
+|.|.. .|+.- +.|-..+.+|.++.|+|+|||.+++ +|..+..+.+.+.+....+
T Consensus 129 ~d~v~~--~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td~~~~~~~~~~~~~~~~~ 191 (246)
T 2vdv_E 129 LSKMFF--CFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITDVKDLHEWMVKHLEEHPL 191 (246)
T ss_dssp EEEEEE--ESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEESCHHHHHHHHHHHHHSTT
T ss_pred cCEEEE--ECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEeccHHHHHHHHHHHHhCcC
Confidence 887653 12210 1122236899999999999999998 5776666666665554443
No 396
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.03 E-value=2.3e-06 Score=80.73 Aligned_cols=99 Identities=21% Similarity=0.285 Sum_probs=67.6
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCC---CCccceeee
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTY---PRTYDLIHA 546 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~y---p~t~Dl~H~ 546 (637)
..+|||+|||.|.++.++++++. .+|+.+|.++.++..+.++ |+ +-+++ |+.+..... +..||+|-+
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVSRGM--DKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCEEEeCCccCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 56899999999999998877653 3566667766777766543 33 23333 443322222 478999998
Q ss_pred ccccccCCCCcCHHHHHHHH--hhcccCCcEEEEEeCH
Q 006633 547 DSIFSLYKDRCEMEDVLLEM--DRILRPEGSVIIRDDV 582 (637)
Q Consensus 547 ~~lfs~~~~~c~~~~~l~e~--dRiLrPgG~~i~~d~~ 582 (637)
+..|.. -..+.++.++ .|+|+|||.+++....
T Consensus 123 ~~~~~~----~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 123 DPPYAK----QEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp CCCGGG----CCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CCCCCc----hhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 777541 2456666666 9999999999997543
No 397
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.03 E-value=1.7e-05 Score=84.67 Aligned_cols=107 Identities=11% Similarity=0.047 Sum_probs=66.2
Q ss_pred HHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC--CEEEEcCccccHHHHHHHHHHcCC-CeEEEEeccccCC--
Q 006633 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTHEAQVQFALERGV-PALIGVMASIRLP-- 277 (637)
Q Consensus 203 ~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~--v~~vdisp~Dls~a~i~~A~erg~-~~~~~~~d~~~Lp-- 277 (637)
..++.+.+.+... +.+|||+|||+|.++..|++.. |+++|+++..+..+..+ +..+++ ++.+..+|+..+.
T Consensus 201 ~l~~~~~~~~~~~---~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n-~~~ng~~~v~~~~~d~~~~~~~ 276 (369)
T 3bt7_A 201 QMLEWALDVTKGS---KGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYN-IAANHIDNVQIIRMAAEEFTQA 276 (369)
T ss_dssp HHHHHHHHHTTTC---CSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHH-HHHTTCCSEEEECCCSHHHHHH
T ss_pred HHHHHHHHHhhcC---CCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHH-HHHcCCCceEEEECCHHHHHHH
Confidence 3444455444332 3489999999999999999863 55565554443333322 223444 5788887765531
Q ss_pred CCC--------------CCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 278 YPS--------------RAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 278 fpd--------------~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
+.. .+||+|+...-. . .+..++.+.|+++|.+++..
T Consensus 277 ~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr---~-----g~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 277 MNGVREFNRLQGIDLKSYQCETIFVDPPR---S-----GLDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp HSSCCCCTTGGGSCGGGCCEEEEEECCCT---T-----CCCHHHHHHHTTSSEEEEEE
T ss_pred HhhccccccccccccccCCCCEEEECcCc---c-----ccHHHHHHHHhCCCEEEEEE
Confidence 121 379999975422 1 13356777788888888875
No 398
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.02 E-value=9.6e-06 Score=81.51 Aligned_cols=95 Identities=15% Similarity=0.092 Sum_probs=58.5
Q ss_pred CCceeEeeecccchhhhhhhcCC---CeEEEEeccCCCCcch----hHHHHhhc-ccchhhcccccc--CCCCCccceee
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD---PLWVMNTVPVEAKINT----LGVIYERG-LIGTYQNWCEAM--STYPRTYDLIH 545 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~---~v~~mnv~~~~~~~~~----l~~~~eRg-l~~~~~~wce~~--~~yp~t~Dl~H 545 (637)
....+|||+|||+|+++.+|++. .- .|+.+|.++.+ +..+.+|. +..+..|-.... ...+..||+|.
T Consensus 75 ~~g~~VLDlG~GtG~~t~~la~~v~~~G---~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~ 151 (232)
T 3id6_C 75 RKGTKVLYLGAASGTTISHVSDIIELNG---KAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLY 151 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHTTTS---EEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEE
T ss_pred CCCCEEEEEeecCCHHHHHHHHHhCCCC---EEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEE
Confidence 44688999999999999888753 11 23444555444 34444543 222222322211 12247899998
Q ss_pred eccccccCCCCcCHHHHHHH-HhhcccCCcEEEEE
Q 006633 546 ADSIFSLYKDRCEMEDVLLE-MDRILRPEGSVIIR 579 (637)
Q Consensus 546 ~~~lfs~~~~~c~~~~~l~e-~dRiLrPgG~~i~~ 579 (637)
++..+ .+...+|.+ +.|+|||||.+++.
T Consensus 152 ~d~a~------~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 152 VDIAQ------PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp ECCCC------TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ecCCC------hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 86432 455666655 56699999999986
No 399
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.02 E-value=3.8e-06 Score=84.00 Aligned_cols=106 Identities=11% Similarity=0.069 Sum_probs=70.8
Q ss_pred CceeEeeecccchhhhhhhcCCC-eEEEEeccCCCCcchhHHHHhh-------cc-------------------------
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDP-LWVMNTVPVEAKINTLGVIYER-------GL------------------------- 523 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~-v~~mnv~~~~~~~~~l~~~~eR-------gl------------------------- 523 (637)
...+|||+|||+|.++..|++.- .-..+|+.+|.++.++..+.++ |+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 45789999999999999987650 0124778888887888777643 33
Q ss_pred ---cc-------------hhh-ccccccCC--C-C-CccceeeeccccccCCC------CcCHHHHHHHHhhcccCCcEE
Q 006633 524 ---IG-------------TYQ-NWCEAMST--Y-P-RTYDLIHADSIFSLYKD------RCEMEDVLLEMDRILRPEGSV 576 (637)
Q Consensus 524 ---~~-------------~~~-~wce~~~~--y-p-~t~Dl~H~~~lfs~~~~------~c~~~~~l~e~dRiLrPgG~~ 576 (637)
+. ..+ |+.+.+.. . + ..||+|-++-.|..... .-....++-++-|+|+|||++
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 11 221 32221110 0 3 48999999866543322 123458899999999999999
Q ss_pred EEEeCH
Q 006633 577 IIRDDV 582 (637)
Q Consensus 577 i~~d~~ 582 (637)
++.+..
T Consensus 211 ~~~~~~ 216 (250)
T 1o9g_A 211 AVTDRS 216 (250)
T ss_dssp EEEESS
T ss_pred EEeCcc
Confidence 997654
No 400
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.02 E-value=2.3e-06 Score=84.05 Aligned_cols=93 Identities=14% Similarity=0.083 Sum_probs=66.1
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc----cchhh-ccccccCCCCCccceeeeccccc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL----IGTYQ-NWCEAMSTYPRTYDLIHADSIFS 551 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl----~~~~~-~wce~~~~yp~t~Dl~H~~~lfs 551 (637)
...+|||+|||.|.++..|.+.. -+|+.+|.++.++..+.++.- +-+.+ |..+.+ +-+.+||+|.+++++.
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~~~ 145 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY-EEEKPYDRVVVWATAP 145 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC-GGGCCEEEEEESSBBS
T ss_pred CCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccccc-ccCCCccEEEECCcHH
Confidence 35689999999999999998765 366677777788888877731 22222 322211 1237899999987775
Q ss_pred cCCCCcCHHHHHHHHhhcccCCcEEEEEeCH
Q 006633 552 LYKDRCEMEDVLLEMDRILRPEGSVIIRDDV 582 (637)
Q Consensus 552 ~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~ 582 (637)
... -++-|+|||||.+++....
T Consensus 146 ~~~---------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 146 TLL---------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp SCC---------HHHHHTEEEEEEEEEEECS
T ss_pred HHH---------HHHHHHcCCCcEEEEEEcC
Confidence 322 3789999999999998653
No 401
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.02 E-value=2e-06 Score=87.96 Aligned_cols=134 Identities=13% Similarity=0.095 Sum_probs=71.2
Q ss_pred ceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhhcc--------cchhhccccccCCC-CCccceeeec
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERGL--------IGTYQNWCEAMSTY-PRTYDLIHAD 547 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRgl--------~~~~~~wce~~~~y-p~t~Dl~H~~ 547 (637)
..+|||+|||.|+|+.+|+++ .|+.+-+.|. +..+.++.+ +-.+++ +..+..+ +.+||+|-|+
T Consensus 75 g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~m------~~~a~~~~~~~~~~~~~v~~~~~-~~D~~~l~~~~fD~V~sd 147 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASRPHVMDVRAYTL------GVGGHEVPRITESYGWNIVKFKS-RVDIHTLPVERTDVIMCD 147 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTTEEEEEEECC------CCSSCCCCCCCCBTTGGGEEEEC-SCCTTTSCCCCCSEEEEC
T ss_pred CCEEEEeCcCCCHHHHHHHHcCcEEEEECchh------hhhhhhhhhhhhccCCCeEEEec-ccCHhHCCCCCCcEEEEe
Confidence 578999999999999998875 4555555553 100111111 111100 1222334 4899999997
Q ss_pred cccccCCCCcCHH---HHHHHHhhcccCCc--EEEEEe----CHHHHHHHHHHHhcCCceeEEeccCCCCCCcceEEEEE
Q 006633 548 SIFSLYKDRCEME---DVLLEMDRILRPEG--SVIIRD----DVDILVKIKSITDGMEWEGRIADHENGPRQREKILFAN 618 (637)
Q Consensus 548 ~lfs~~~~~c~~~---~~l~e~dRiLrPgG--~~i~~d----~~~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~ 618 (637)
..+......-+.. .+|-++.|+||||| .|++.. ..+++..++.+.+.+. .+.+...-+-....|..+||.
T Consensus 148 ~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~~~~~~~~l~~l~~~f~-~v~~~k~~sR~~s~E~y~v~~ 226 (265)
T 2oxt_A 148 VGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPYSVEVMERLSVMQRKWG-GGLVRNPYSRNSTHEMYFTSR 226 (265)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHHHHHHHHHHC-CEEECCTTSCTTCCCEEEESS
T ss_pred CcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCCChhHHHHHHHHHHHcC-CEEEEEecccCCCccEEEEec
Confidence 5522111000001 27788999999999 999963 2322233333332221 222322222233467777774
Q ss_pred e
Q 006633 619 K 619 (637)
Q Consensus 619 K 619 (637)
+
T Consensus 227 ~ 227 (265)
T 2oxt_A 227 A 227 (265)
T ss_dssp C
T ss_pred C
Confidence 4
No 402
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.02 E-value=1.1e-05 Score=77.31 Aligned_cols=132 Identities=12% Similarity=0.178 Sum_probs=71.6
Q ss_pred ceeEeeecccchhhhhhhcCC-C-----eEEEEeccCCCCcchhHHHHhhcccchhhccccccC----------------
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-P-----LWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMS---------------- 535 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~-----v~~mnv~~~~~~~~~l~~~~eRgl~~~~~~wce~~~---------------- 535 (637)
..+|||+|||.|+++.+|+++ + |+.+-+.|... ..++.-+..|+.+ ..
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~---------~~~v~~~~~d~~~-~~~~~~~~~~~i~~~~~~ 92 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDP---------IPNVYFIQGEIGK-DNMNNIKNINYIDNMNNN 92 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCC---------CTTCEEEECCTTT-TSSCCC-----------C
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCC---------CCCceEEEccccc-hhhhhhccccccccccch
Confidence 478999999999999999754 2 44444444211 0121111112221 11
Q ss_pred --------CCC-CccceeeeccccccCCCC-cC-------HHHHHHHHhhcccCCcEEEEEeCH-HHHHHHHHHHhcCCc
Q 006633 536 --------TYP-RTYDLIHADSIFSLYKDR-CE-------MEDVLLEMDRILRPEGSVIIRDDV-DILVKIKSITDGMEW 597 (637)
Q Consensus 536 --------~yp-~t~Dl~H~~~lfs~~~~~-c~-------~~~~l~e~dRiLrPgG~~i~~d~~-~~~~~~~~~~~~~~W 597 (637)
.+| .+||+|.+++.+...... -+ ...+|.++-|+|||||.+++..-. +....+...++..-.
T Consensus 93 ~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~l~~~l~~~f~ 172 (201)
T 2plw_A 93 SVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQTNNLKTYLKGMFQ 172 (201)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTTHHHHHHHHHTTEE
T ss_pred hhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 034 689999997765431100 01 124788999999999999996321 223344444444322
Q ss_pred eeEEec-cCCCCCCcceEEEEEe
Q 006633 598 EGRIAD-HENGPRQREKILFANK 619 (637)
Q Consensus 598 ~~~~~~-~e~~~~~~~~~l~~~K 619 (637)
++.+.. ....+...|..+||++
T Consensus 173 ~v~~~~~~~~r~~s~e~y~v~~~ 195 (201)
T 2plw_A 173 LVHTTKPKASRNESREIYLVCKN 195 (201)
T ss_dssp EEEECCCC-----CCEEEEEEEE
T ss_pred eEEEECCcccCCcCceEEEEEec
Confidence 333332 2222345788999976
No 403
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.02 E-value=5.6e-06 Score=81.80 Aligned_cols=96 Identities=15% Similarity=0.116 Sum_probs=60.4
Q ss_pred CceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhhcc----cchhh-ccccc--cCCCCCccceeeecc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERGL----IGTYQ-NWCEA--MSTYPRTYDLIHADS 548 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRgl----~~~~~-~wce~--~~~yp~t~Dl~H~~~ 548 (637)
...+|||+|||+|.++.+|++. + .-.|+.+|.++.++..+.++-- +-.++ |..+. +..++.+||+|-.+
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~- 150 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIAD--KGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED- 150 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTT--TSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEEC-
T ss_pred CCCEEEEEcccCCHHHHHHHHHcC--CcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEe-
Confidence 3568999999999999999765 3 1245556666667766655421 11111 22111 12234789987531
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEE
Q 006633 549 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIR 579 (637)
Q Consensus 549 lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~ 579 (637)
+ ...-..+.+|.++.|+|||||.+++.
T Consensus 151 ~----~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 151 V----AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp C----CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred c----CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 1 11112367899999999999999994
No 404
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.02 E-value=5.6e-06 Score=82.60 Aligned_cols=107 Identities=13% Similarity=0.138 Sum_probs=76.1
Q ss_pred CCceeEeeecccchhhhhhhcCC---CeEEEEeccCCCCcchhHHHHhh----cccc---hhh-ccccccCCCC-Cccce
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD---PLWVMNTVPVEAKINTLGVIYER----GLIG---TYQ-NWCEAMSTYP-RTYDL 543 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~---~v~~mnv~~~~~~~~~l~~~~eR----gl~~---~~~-~wce~~~~yp-~t~Dl 543 (637)
....+|||+|||.|.++.+|++. .. .|+.+|.++.++..+.++ |+-. +.+ |..+ .+| .+||+
T Consensus 92 ~~~~~vldiG~G~G~~~~~l~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~~~~D~ 165 (255)
T 3mb5_A 92 SPGDFIVEAGVGSGALTLFLANIVGPEG---RVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE---GIEEENVDH 165 (255)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTS---EEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG---CCCCCSEEE
T ss_pred CCCCEEEEecCCchHHHHHHHHHhCCCe---EEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh---ccCCCCcCE
Confidence 34678999999999999999765 32 445557766788887776 5532 222 4333 355 78999
Q ss_pred eeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-HHHHHHHHHHHhcCC
Q 006633 544 IHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-VDILVKIKSITDGME 596 (637)
Q Consensus 544 ~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-~~~~~~~~~~~~~~~ 596 (637)
|-+ +--+...+|-++.|+|+|||.+++... .+...++.+.++...
T Consensus 166 v~~--------~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~g 211 (255)
T 3mb5_A 166 VIL--------DLPQPERVVEHAAKALKPGGFFVAYTPCSNQVMRLHEKLREFK 211 (255)
T ss_dssp EEE--------CSSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHTG
T ss_pred EEE--------CCCCHHHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 877 333456789999999999999998753 556666777666655
No 405
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.01 E-value=1.2e-05 Score=79.41 Aligned_cols=134 Identities=15% Similarity=0.067 Sum_probs=76.5
Q ss_pred CceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcc----hhHHHHhhcccchhh-ccccc--cCCCCCccceeeec
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKIN----TLGVIYERGLIGTYQ-NWCEA--MSTYPRTYDLIHAD 547 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~----~l~~~~eRgl~~~~~-~wce~--~~~yp~t~Dl~H~~ 547 (637)
...+|||+|||+|.++.+|++. +- -.|+.+|.++. .+..+.++.-+-.++ |..+. +...+.+||+|.++
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~--~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~ 154 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPD--GLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFAD 154 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTT--CEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEEC
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCC--cEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEc
Confidence 3568999999999999999765 11 13344455533 344444432222222 33221 12124789999984
Q ss_pred cccccCCCCcCH-HHHHHHHhhcccCCcEEEEEeCHH----------HHHHHHHHHhcCCceeEE-eccCCCCCCcceEE
Q 006633 548 SIFSLYKDRCEM-EDVLLEMDRILRPEGSVIIRDDVD----------ILVKIKSITDGMEWEGRI-ADHENGPRQREKIL 615 (637)
Q Consensus 548 ~lfs~~~~~c~~-~~~l~e~dRiLrPgG~~i~~d~~~----------~~~~~~~~~~~~~W~~~~-~~~e~~~~~~~~~l 615 (637)
.. ..+. ..++.++-|+|||||.+++.-... .+.+-.++++...|+... .+.+.-+ ..--++
T Consensus 155 ~~------~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~-~~~~~v 227 (233)
T 2ipx_A 155 VA------QPDQTRIVALNAHTFLRNGGHFVISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYE-RDHAVV 227 (233)
T ss_dssp CC------CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSSSCHHHHHHHHHHTTGGGTEEEEEEEECTTTS-SSEEEE
T ss_pred CC------CccHHHHHHHHHHHHcCCCeEEEEEEcccccccCCCHHHHHHHHHHHHHHCCCceEEEEecCCcc-CCcEEE
Confidence 33 2222 345778999999999999963332 122223556666676654 3333222 234566
Q ss_pred EEEe
Q 006633 616 FANK 619 (637)
Q Consensus 616 ~~~K 619 (637)
+++|
T Consensus 228 ~~~~ 231 (233)
T 2ipx_A 228 VGVY 231 (233)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6665
No 406
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.01 E-value=1.9e-05 Score=84.01 Aligned_cols=140 Identities=14% Similarity=0.168 Sum_probs=89.9
Q ss_pred cCCCCCceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhh----cccchhhcc-ccccCCCCCcccee
Q 006633 472 LAQPGRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNW-CEAMSTYPRTYDLI 544 (637)
Q Consensus 472 l~~~~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gl~~~~~~w-ce~~~~yp~t~Dl~ 544 (637)
+.. ....+|||+|||.|.++.+|++. ++ .++..|. +.++..+.++ |+-+-+.-- ...+.++|..||+|
T Consensus 198 ~~~-~~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~D~v 272 (369)
T 3gwz_A 198 YDF-SGAATAVDIGGGRGSLMAAVLDAFPGL---RGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETIPDGADVY 272 (369)
T ss_dssp SCC-TTCSEEEEETCTTSHHHHHHHHHCTTC---EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSCSEE
T ss_pred CCC-ccCcEEEEeCCCccHHHHHHHHHCCCC---eEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCceEE
Confidence 444 55789999999999999999764 33 2334455 3666666543 542211111 12235667789999
Q ss_pred eeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH------------H------------HHHHHHHHHhcCCceeE
Q 006633 545 HADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV------------D------------ILVKIKSITDGMEWEGR 600 (637)
Q Consensus 545 H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~------------~------------~~~~~~~~~~~~~W~~~ 600 (637)
.+.+++-.+.+. ....+|-++-|+|+|||+++|.|.. + ....++++++.-.++..
T Consensus 273 ~~~~vlh~~~d~-~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~ 351 (369)
T 3gwz_A 273 LIKHVLHDWDDD-DVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGLRVE 351 (369)
T ss_dssp EEESCGGGSCHH-HHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTEEEE
T ss_pred EhhhhhccCCHH-HHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCCeEE
Confidence 998888654322 2247999999999999999997521 1 13556677777778776
Q ss_pred EeccCCCCCCcceEEEEEe
Q 006633 601 IADHENGPRQREKILFANK 619 (637)
Q Consensus 601 ~~~~e~~~~~~~~~l~~~K 619 (637)
....- ......|+.++|
T Consensus 352 ~~~~~--~~~~~svie~~~ 368 (369)
T 3gwz_A 352 RSLPC--GAGPVRIVEIRR 368 (369)
T ss_dssp EEEEC--SSSSEEEEEEEE
T ss_pred EEEEC--CCCCcEEEEEEe
Confidence 44331 113467888876
No 407
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.01 E-value=6.7e-06 Score=87.01 Aligned_cols=96 Identities=17% Similarity=0.181 Sum_probs=66.4
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhhccccccC--CCCCccceeeec
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQNWCEAMS--TYPRTYDLIHAD 547 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~~wce~~~--~yp~t~Dl~H~~ 547 (637)
...+|||+|||.|.++..+++.+. -.|+.+|.+ .++..+.++ |+ +.+++ ..+. ..|..||+|-+.
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~--~~V~~vD~s-~~~~~a~~~~~~~~l~~~v~~~~---~d~~~~~~~~~~D~Ivs~ 123 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGA--RKIYAVEAS-TMAQHAEVLVKSNNLTDRIVVIP---GKVEEVSLPEQVDIIISE 123 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC--SEEEEEECS-THHHHHHHHHHHTTCTTTEEEEE---SCTTTCCCSSCEEEEEEC
T ss_pred CcCEEEEcCCCccHHHHHHHhCCC--CEEEEECCH-HHHHHHHHHHHHcCCCCcEEEEE---cchhhCCCCCceeEEEEe
Confidence 356899999999999999887754 244555555 366555443 55 33333 2222 346889999998
Q ss_pred cccccCCCCcCHHHHHHHHhhcccCCcEEEEE
Q 006633 548 SIFSLYKDRCEMEDVLLEMDRILRPEGSVIIR 579 (637)
Q Consensus 548 ~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~ 579 (637)
.++..... -.+...|.++.|+|+|||.+++.
T Consensus 124 ~~~~~~~~-~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 124 PMGYMLFN-ERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CCBTTBTT-TSHHHHHHHGGGGEEEEEEEESC
T ss_pred CchhcCCh-HHHHHHHHHHHhhcCCCeEEEEe
Confidence 77664432 24567888999999999999864
No 408
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.01 E-value=2.4e-06 Score=84.38 Aligned_cols=95 Identities=15% Similarity=0.217 Sum_probs=68.1
Q ss_pred ceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCC--CCccceeee
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTY--PRTYDLIHA 546 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~y--p~t~Dl~H~ 546 (637)
..+|||+|||.|.++.+|++. + ..+|+.+|.++.++..+.++ |+ +.+.+ |..+..... +.+||+|-+
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 132 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALP--EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFI 132 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCT--TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEE
Confidence 458999999999999998765 1 13556667776788887776 54 33332 333322222 478999988
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 547 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 547 ~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
+..++ ....+|-++-|+|||||.+++.+
T Consensus 133 ~~~~~------~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 133 DAAKG------QYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EGGGS------CHHHHHHHHGGGEEEEEEEEEET
T ss_pred CCCHH------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 65543 56789999999999999999974
No 409
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.00 E-value=2.5e-05 Score=80.11 Aligned_cols=115 Identities=17% Similarity=0.151 Sum_probs=68.4
Q ss_pred HHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc-C---CEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCC
Q 006633 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-N---ILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPY 278 (637)
Q Consensus 203 ~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-~---v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpf 278 (637)
..+.++.+...+.++ .+|||+|||.|.|+..++++ + +.++++.. |+....+.. ...+.++.....+.....+
T Consensus 61 ~KL~ei~ek~~l~~~--~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGv-Dl~~~pi~~-~~~g~~ii~~~~~~dv~~l 136 (277)
T 3evf_A 61 AKLRWFHERGYVKLE--GRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGR-DGHEKPMNV-QSLGWNIITFKDKTDIHRL 136 (277)
T ss_dssp HHHHHHHHTTSSCCC--EEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC-TTCCCCCCC-CBTTGGGEEEECSCCTTTS
T ss_pred HHHHHHHHhCCCCCC--CEEEEecCCCCHHHHHHHHhcCCCcceeEEEec-cCccccccc-CcCCCCeEEEeccceehhc
Confidence 333444444334443 48999999999999988876 3 34455542 221100000 0012234444445455567
Q ss_pred CCCCeeEEEeccccc---cCCcCCHH--HHHHHHHhcccCC-eEEEEEeC
Q 006633 279 PSRAFDMAHCSRCLI---PWGQYADG--LYLIEVDRVLRPG-GYWILSGP 322 (637)
Q Consensus 279 pd~sFDlV~~s~~L~---h~~~~d~~--~~L~ei~RvLKPG-G~Lvls~p 322 (637)
+++.||+|+|..+.. ++.+ ... .+|..+.++|||| |.|++...
T Consensus 137 ~~~~~DlVlsD~apnsG~~~~D-~~rs~~LL~~a~~~LkpG~G~FV~KVf 185 (277)
T 3evf_A 137 EPVKCDTLLCDIGESSSSSVTE-GERTVRVLDTVEKWLACGVDNFCVKVL 185 (277)
T ss_dssp CCCCCSEEEECCCCCCSCHHHH-HHHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred CCCCccEEEecCccCcCchHHH-HHHHHHHHHHHHHHhCCCCCeEEEEec
Confidence 788999999976552 2332 111 2468889999999 99999864
No 410
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.98 E-value=5.5e-06 Score=80.29 Aligned_cols=134 Identities=13% Similarity=0.060 Sum_probs=72.1
Q ss_pred ceeEeeecccchhhhhhhcCCC--eEEEEeccCCCCcchhHHHHhhcccchhhcccccc-----C-CCC----Cccceee
Q 006633 478 YRNLLDMNAYLGGFAAALVDDP--LWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAM-----S-TYP----RTYDLIH 545 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~--v~~mnv~~~~~~~~~l~~~~eRgl~~~~~~wce~~-----~-~yp----~t~Dl~H 545 (637)
..+|||+|||+|+++.+|+++. |+.+-+.|.... .++--+..|..+.- . .++ .+||+|-
T Consensus 26 g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~~---------~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vl 96 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEEI---------AGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVV 96 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCCC---------TTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEE
T ss_pred CCEEEEEeecCCHHHHHHHHcCCcEEEEeccccccC---------CCeEEEEccccCHHHHHHHHHHhhcccCCcceEEe
Confidence 6799999999999999998874 344444432110 12211111222100 0 011 4899999
Q ss_pred eccccccCCC--------CcCHHHHHHHHhhcccCCcEEEEEeC-HHHHHHHHHHHhcCCceeEEe-ccCCCCCCcceEE
Q 006633 546 ADSIFSLYKD--------RCEMEDVLLEMDRILRPEGSVIIRDD-VDILVKIKSITDGMEWEGRIA-DHENGPRQREKIL 615 (637)
Q Consensus 546 ~~~lfs~~~~--------~c~~~~~l~e~dRiLrPgG~~i~~d~-~~~~~~~~~~~~~~~W~~~~~-~~e~~~~~~~~~l 615 (637)
++.-...... ....+.+|-++-|+|||||.|++..- .+....+...++..==++.++ ...+-+...|..+
T Consensus 97 sd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~~~~~~l~~~F~~v~~~kP~asR~~s~E~y~ 176 (191)
T 3dou_A 97 SDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTNDFIAIWRKNFSSYKISKPPASRGSSSEIYI 176 (191)
T ss_dssp ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHHHHHHHHGGGEEEEEEECC------CCEEEE
T ss_pred cCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHHHHHHHHHHhcCEEEEECCCCccCCCceEEE
Confidence 8764332111 11234678889999999999998531 122234444444431222232 2223334579999
Q ss_pred EEEec
Q 006633 616 FANKK 620 (637)
Q Consensus 616 ~~~K~ 620 (637)
||++.
T Consensus 177 v~~~~ 181 (191)
T 3dou_A 177 MFFGF 181 (191)
T ss_dssp EEEEE
T ss_pred EEeee
Confidence 99763
No 411
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=97.98 E-value=2.5e-06 Score=85.87 Aligned_cols=90 Identities=17% Similarity=0.203 Sum_probs=64.4
Q ss_pred CceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhhcc-cchhh-ccccccCCCC-Cccceeeeccccc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYERGL-IGTYQ-NWCEAMSTYP-RTYDLIHADSIFS 551 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eRgl-~~~~~-~wce~~~~yp-~t~Dl~H~~~lfs 551 (637)
...+|||+|||.|.++..|++. +. +|+.+|.++.++..+.+++- +-... |. +.+ +++ .+||+|.+...
T Consensus 85 ~~~~vLdiG~G~G~~~~~l~~~~~~~---~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~-~~~~~~fD~v~~~~~-- 157 (269)
T 1p91_A 85 KATAVLDIGCGEGYYTHAFADALPEI---TTFGLDVSKVAIKAAAKRYPQVTFCVASS-HRL-PFSDTSMDAIIRIYA-- 157 (269)
T ss_dssp TCCEEEEETCTTSTTHHHHHHTCTTS---EEEEEESCHHHHHHHHHHCTTSEEEECCT-TSC-SBCTTCEEEEEEESC--
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCC---eEEEEeCCHHHHHHHHHhCCCcEEEEcch-hhC-CCCCCceeEEEEeCC--
Confidence 3568999999999999999876 33 45666777789999988862 11111 11 122 233 79999998433
Q ss_pred cCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006633 552 LYKDRCEMEDVLLEMDRILRPEGSVIIRDD 581 (637)
Q Consensus 552 ~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 581 (637)
+..|-|+.|+|||||.+++.+.
T Consensus 158 --------~~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 158 --------PCKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp --------CCCHHHHHHHEEEEEEEEEEEE
T ss_pred --------hhhHHHHHHhcCCCcEEEEEEc
Confidence 2358999999999999999754
No 412
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.97 E-value=9.5e-06 Score=79.46 Aligned_cols=129 Identities=16% Similarity=0.090 Sum_probs=81.7
Q ss_pred ceeEeeecccchhhhhhhcCC-C-eEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCCC-----Cccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-P-LWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-----RTYD 542 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~-v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~yp-----~t~D 542 (637)
..+|||+|||+|.++.+|++. + - ..|+.+|.++.++..+.++ |+ +-+++ |..+.+...+ .+||
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D 147 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPAD--GRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFD 147 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTT--CEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCcc
Confidence 468999999999999999874 1 1 2445556665777777654 54 22222 2222222222 6899
Q ss_pred eeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC------------HHHHHHHHH----HHhcCCceeEEeccCC
Q 006633 543 LIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD------------VDILVKIKS----ITDGMEWEGRIADHEN 606 (637)
Q Consensus 543 l~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~------------~~~~~~~~~----~~~~~~W~~~~~~~e~ 606 (637)
+|.++.. ......++-++-|+|||||.+++.+. ......+++ +...-+++..+...
T Consensus 148 ~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~-- 219 (229)
T 2avd_A 148 VAVVDAD------KENCSAYYERCLQLLRPGGILAVLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPL-- 219 (229)
T ss_dssp EEEECSC------STTHHHHHHHHHHHEEEEEEEEEECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEECS--
T ss_pred EEEECCC------HHHHHHHHHHHHHHcCCCeEEEEECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEEec--
Confidence 9988543 34557899999999999999999532 112223333 34455676666533
Q ss_pred CCCCcceEEEEEec
Q 006633 607 GPRQREKILFANKK 620 (637)
Q Consensus 607 ~~~~~~~~l~~~K~ 620 (637)
.+.+++++|.
T Consensus 220 ----~dGl~~~~k~ 229 (229)
T 2avd_A 220 ----GDGLTLAFKI 229 (229)
T ss_dssp ----TTCEEEEEEC
T ss_pred ----CCceEEEEEC
Confidence 3568888873
No 413
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.96 E-value=1.4e-05 Score=81.41 Aligned_cols=83 Identities=13% Similarity=0.165 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHc---CCCeEEEEeccccCCC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALER---GVPALIGVMASIRLPY 278 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~er---g~~~~~~~~d~~~Lpf 278 (637)
...++.+.+.+...++. +|||||||+|.++..|++++..++.+ |+++.+++.++++ ..++.+..+|+..+++
T Consensus 15 ~~i~~~iv~~~~~~~~~--~VLEIG~G~G~lt~~La~~~~~V~av---Eid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~ 89 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKTD--TLVEIGPGRGALTDYLLTECDNLALV---EIDRDLVAFLQKKYNQQKNITIYQNDALQFDF 89 (255)
T ss_dssp HHHHHHHHHHHCCCTTC--EEEEECCTTTTTHHHHTTTSSEEEEE---ECCHHHHHHHHHHHTTCTTEEEEESCTTTCCG
T ss_pred HHHHHHHHHhcCCCCcC--EEEEEcccccHHHHHHHHhCCEEEEE---ECCHHHHHHHHHHHhhCCCcEEEEcchHhCCH
Confidence 34566777777666544 99999999999999999985444444 4455555555543 3468899999988876
Q ss_pred CC----CCeeEEEecc
Q 006633 279 PS----RAFDMAHCSR 290 (637)
Q Consensus 279 pd----~sFDlV~~s~ 290 (637)
++ +.|| |+++.
T Consensus 90 ~~~~~~~~~~-vv~Nl 104 (255)
T 3tqs_A 90 SSVKTDKPLR-VVGNL 104 (255)
T ss_dssp GGSCCSSCEE-EEEEC
T ss_pred HHhccCCCeE-EEecC
Confidence 53 5688 66665
No 414
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.96 E-value=3.2e-05 Score=83.49 Aligned_cols=116 Identities=13% Similarity=0.032 Sum_probs=74.6
Q ss_pred HHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--C----------------------------------------
Q 006633 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--N---------------------------------------- 240 (637)
Q Consensus 203 ~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~---------------------------------------- 240 (637)
.+...+..+....++ ..+||.+||+|.++..++.. +
T Consensus 188 ~lAa~ll~l~~~~~~--~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 265 (393)
T 3k0b_A 188 TMAAALVLLTSWHPD--RPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLN 265 (393)
T ss_dssp HHHHHHHHHSCCCTT--SCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred HHHHHHHHHhCCCCC--CeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCce
Confidence 344445555554443 48999999999998776643 2
Q ss_pred CEEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccCCCCCCCeeEEEeccccccCCc--CCHHHHHHHHHhcccC--C
Q 006633 241 ILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQ--YADGLYLIEVDRVLRP--G 314 (637)
Q Consensus 241 v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~--~d~~~~L~ei~RvLKP--G 314 (637)
++++|+++.++..+..+ +...++ .+.+...|...++.+ .+||+|+++.-+..-.. ++...+..++.++||+ |
T Consensus 266 V~GvDid~~al~~Ar~N-a~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g 343 (393)
T 3k0b_A 266 IIGGDIDARLIEIAKQN-AVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPT 343 (393)
T ss_dssp EEEEESCHHHHHHHHHH-HHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred EEEEECCHHHHHHHHHH-HHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCC
Confidence 66777766544444332 223344 378899999888865 48999999964311111 1344566667777766 8
Q ss_pred eEEEEEeC
Q 006633 315 GYWILSGP 322 (637)
Q Consensus 315 G~Lvls~p 322 (637)
|.+++.++
T Consensus 344 ~~~~iit~ 351 (393)
T 3k0b_A 344 WSVYVLTS 351 (393)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 88888765
No 415
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.95 E-value=1e-05 Score=90.80 Aligned_cols=118 Identities=12% Similarity=0.095 Sum_probs=76.4
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc----------------------CCEEEEcCccccHHHHHHHH
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR----------------------NILAVSFAPRDTHEAQVQFA 259 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~----------------------~v~~vdisp~Dls~a~i~~A 259 (637)
+..++.+.+++.... +.+|||.+||+|.|+..+++. .+.++++++....-+..+..
T Consensus 155 ~~iv~~mv~~l~p~~--~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~ 232 (541)
T 2ar0_A 155 RPLIKTIIHLLKPQP--REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCL 232 (541)
T ss_dssp HHHHHHHHHHHCCCT--TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCC--CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHH
Confidence 445566677765444 348999999999988776542 46677665433333322222
Q ss_pred HHcCCC------eEEEEeccccCC-CCCCCeeEEEeccccccCCc------------CCHHHHHHHHHhcccCCeEEEEE
Q 006633 260 LERGVP------ALIGVMASIRLP-YPSRAFDMAHCSRCLIPWGQ------------YADGLYLIEVDRVLRPGGYWILS 320 (637)
Q Consensus 260 ~erg~~------~~~~~~d~~~Lp-fpd~sFDlV~~s~~L~h~~~------------~d~~~~L~ei~RvLKPGG~Lvls 320 (637)
..+.. ..+..+|+...+ .+...||+|+++.-+..... .....++..+.+.|||||++++.
T Consensus 233 -l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V 311 (541)
T 2ar0_A 233 -LHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVV 311 (541)
T ss_dssp -TTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -HhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEE
Confidence 12333 566777765443 34578999999875533211 01236899999999999999999
Q ss_pred eC
Q 006633 321 GP 322 (637)
Q Consensus 321 ~p 322 (637)
.|
T Consensus 312 ~p 313 (541)
T 2ar0_A 312 VP 313 (541)
T ss_dssp EE
T ss_pred ec
Confidence 76
No 416
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=97.95 E-value=1e-05 Score=83.04 Aligned_cols=139 Identities=16% Similarity=0.063 Sum_probs=83.1
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh-----cc-----------cchhh-ccccccCCCCCc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER-----GL-----------IGTYQ-NWCEAMSTYPRT 540 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR-----gl-----------~~~~~-~wce~~~~yp~t 540 (637)
.++|||+|||.|+++.+|++.+. .+|+-+|..+..+..+.++ |+ +.+++ |..+-+.. +.+
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDV--DEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCC--SEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCeEEEEcCCcCHHHHHHHhCCC--CEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 47899999999999999988854 4566667666788877665 32 11111 11111122 688
Q ss_pred cceeeeccccccCCCCc-CHHHHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCceeEEecc--CCCCCCcc
Q 006633 541 YDLIHADSIFSLYKDRC-EMEDVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIADH--ENGPRQRE 612 (637)
Q Consensus 541 ~Dl~H~~~lfs~~~~~c-~~~~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~--e~~~~~~~ 612 (637)
||+|-++.........- ....++-++-|+|+|||.+++.. ..+.+..+.+.++..--.+..... ..+ .+..
T Consensus 153 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~-~g~~ 231 (281)
T 1mjf_A 153 FDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGSVYLFTDELISAYKEMKKVFDRVYYYSFPVIGY-ASPW 231 (281)
T ss_dssp EEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEETTTSHHHHHHHHHHHHHHCSEEEEEEECCTTS-SSSE
T ss_pred eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCceEEEEEecCCC-CceE
Confidence 99999864422111111 12678899999999999999962 234444444444433223332221 111 2346
Q ss_pred eEEEEEec
Q 006633 613 KILFANKK 620 (637)
Q Consensus 613 ~~l~~~K~ 620 (637)
.+++|.|.
T Consensus 232 ~~~~as~~ 239 (281)
T 1mjf_A 232 AFLVGVKG 239 (281)
T ss_dssp EEEEEEES
T ss_pred EEEEeeCC
Confidence 78889886
No 417
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=97.95 E-value=7.6e-06 Score=86.16 Aligned_cols=138 Identities=19% Similarity=0.258 Sum_probs=87.0
Q ss_pred CCceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhh----ccc---chhhccccccCCCCCccceeee
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GLI---GTYQNWCEAMSTYPRTYDLIHA 546 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gl~---~~~~~wce~~~~yp~t~Dl~H~ 546 (637)
....+|||+|||.|.++.+|++. ++ .++..|. +.++..+.++ |+- -..+ +..+..+|..||++.+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~---~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~~~~~~D~v~~ 255 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHV---SATVLEM-AGTVDTARSYLKDEGLSDRVDVVE--GDFFEPLPRKADAIIL 255 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTC---EEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEE--CCTTSCCSSCEEEEEE
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCC---EEEEecC-HHHHHHHHHHHHhcCCCCceEEEe--CCCCCCCCCCccEEEE
Confidence 44679999999999999998764 33 2333444 3677766653 442 2221 1223456767999999
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH--------H------------------HHHHHHHHHhcCCceeE
Q 006633 547 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV--------D------------------ILVKIKSITDGMEWEGR 600 (637)
Q Consensus 547 ~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~--------~------------------~~~~~~~~~~~~~W~~~ 600 (637)
..++..+.+. ....+|-++-|+|+|||.++|.|.. . ....++++++.-.++..
T Consensus 256 ~~vl~~~~~~-~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 334 (360)
T 1tw3_A 256 SFVLLNWPDH-DAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVE 334 (360)
T ss_dssp ESCGGGSCHH-HHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEE
T ss_pred cccccCCCHH-HHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEE
Confidence 8887654321 2347999999999999999998643 0 12455666666677665
Q ss_pred EeccCCCC--CCcceEEEEEec
Q 006633 601 IADHENGP--RQREKILFANKK 620 (637)
Q Consensus 601 ~~~~e~~~--~~~~~~l~~~K~ 620 (637)
....-.++ .-...++.++|+
T Consensus 335 ~~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 335 EVRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp EEEEEECSSSSCEEEEEEEEEC
T ss_pred EEEeCCCCcccCccEEEEEEeC
Confidence 33222111 011568888884
No 418
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.95 E-value=6.9e-06 Score=86.60 Aligned_cols=132 Identities=14% Similarity=0.074 Sum_probs=82.9
Q ss_pred ceeEeeecccchhhhhhhcCCC-eEEEEeccCCCCcchhHHHHhh----cccchhhccccccCCCCCccceeeecccccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDP-LWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMSTYPRTYDLIHADSIFSL 552 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~-v~~mnv~~~~~~~~~l~~~~eR----gl~~~~~~wce~~~~yp~t~Dl~H~~~lfs~ 552 (637)
..+|||+|||+|.++.+|++.. - .+|+.+|.++.++..+.++ |+-..+ -+...+...+.+||+|-++..|..
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~--~~v~~vD~s~~~l~~a~~~~~~~~~~~~~-~~~d~~~~~~~~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPK--IRLTLCDVSAPAVEASRATLAANGVEGEV-FASNVFSEVKGRFDMIISNPPFHD 273 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTT--CBCEEEESBHHHHHHHHHHHHHTTCCCEE-EECSTTTTCCSCEEEEEECCCCCS
T ss_pred CCeEEEecCccCHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhCCCCEE-EEccccccccCCeeEEEECCCccc
Confidence 3479999999999999987652 1 1456667766777776654 432111 122233323589999999888763
Q ss_pred CC--CCcCHHHHHHHHhhcccCCcEEEEEeCH--HHHHHHHHHHhcCCceeEEeccCCCCCCcceEEEEEec
Q 006633 553 YK--DRCEMEDVLLEMDRILRPEGSVIIRDDV--DILVKIKSITDGMEWEGRIADHENGPRQREKILFANKK 620 (637)
Q Consensus 553 ~~--~~c~~~~~l~e~dRiLrPgG~~i~~d~~--~~~~~~~~~~~~~~W~~~~~~~e~~~~~~~~~l~~~K~ 620 (637)
.. +.-..+.+|.++.|+|||||.+++.... ..-..++++.... +... .+ .+-+|+-++|.
T Consensus 274 g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~l~~~f~~~--~~~~--~~----~gf~v~~~~k~ 337 (343)
T 2pjd_A 274 GMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFH--EVIA--QT----GRFKVYRAIMT 337 (343)
T ss_dssp SSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTSSHHHHHHHHHSCC--EEEE--EC----SSEEEEEEEC-
T ss_pred CccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcHHHHHHhcCce--EEEe--eC----CCEEEEEEEeC
Confidence 21 1234578999999999999999997543 2334455554432 2222 11 35677777663
No 419
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.94 E-value=1.7e-05 Score=92.09 Aligned_cols=101 Identities=12% Similarity=0.154 Sum_probs=72.2
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----------cc--cchhhccccccCCCCCccceee
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----------GL--IGTYQNWCEAMSTYPRTYDLIH 545 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----------gl--~~~~~~wce~~~~yp~t~Dl~H 545 (637)
..+|||+|||.|.++.+|++..--...|+.+|.++.++..+.+| |+ +-.++.=.+.+...+.+||+|.
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV 801 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGT 801 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEE
Confidence 57899999999999999998741113667778888899988773 44 2333311122333348999999
Q ss_pred eccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 546 ADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 546 ~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
+..+|....+. ....++-|+-|+|||| .+||+.
T Consensus 802 ~~eVLeHL~dp-~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 802 CLEVIEHMEED-QACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp EESCGGGSCHH-HHHHHHHHHHHTTCCS-EEEEEE
T ss_pred EeCchhhCChH-HHHHHHHHHHHHcCCC-EEEEEe
Confidence 98888765542 2346889999999999 888864
No 420
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.94 E-value=8.5e-06 Score=85.83 Aligned_cols=105 Identities=15% Similarity=0.244 Sum_probs=65.8
Q ss_pred hhccCCCCCceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhH--HHHhhcccchhhccc-cccCCCCCccce
Q 006633 469 DYQLAQPGRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLG--VIYERGLIGTYQNWC-EAMSTYPRTYDL 543 (637)
Q Consensus 469 ~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~--~~~eRgl~~~~~~wc-e~~~~yp~t~Dl 543 (637)
+..+.. ....+|||+|||.|.++.+|++. ++ .++..|.+ ..+. .+.+.|+-+-+.--+ ..|...| +||+
T Consensus 177 ~~~~~~-~~~~~vLDvG~G~G~~~~~l~~~~p~~---~~~~~D~~-~~~~~~~~~~~~~~~~v~~~~~d~~~~~p-~~D~ 250 (348)
T 3lst_A 177 ARAGDF-PATGTVADVGGGRGGFLLTVLREHPGL---QGVLLDRA-EVVARHRLDAPDVAGRWKVVEGDFLREVP-HADV 250 (348)
T ss_dssp HHHSCC-CSSEEEEEETCTTSHHHHHHHHHCTTE---EEEEEECH-HHHTTCCCCCGGGTTSEEEEECCTTTCCC-CCSE
T ss_pred HHhCCc-cCCceEEEECCccCHHHHHHHHHCCCC---EEEEecCH-HHhhcccccccCCCCCeEEEecCCCCCCC-CCcE
Confidence 333444 56899999999999999999763 33 22333333 2222 001123322111111 2235677 9999
Q ss_pred eeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 544 IHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 544 ~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
|.+..++-.+.+. +...+|-++-|+|||||.++|.|
T Consensus 251 v~~~~vlh~~~d~-~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 251 HVLKRILHNWGDE-DSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp EEEESCGGGSCHH-HHHHHHHHHHHTCCTTCEEEEEE
T ss_pred EEEehhccCCCHH-HHHHHHHHHHHhcCCCCEEEEEE
Confidence 9998877654422 23589999999999999999975
No 421
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.93 E-value=2.1e-05 Score=84.66 Aligned_cols=103 Identities=16% Similarity=0.158 Sum_probs=65.6
Q ss_pred CCEEEEECCCCchHHHHHhhc---------------------CCEEEEcCccccHHHHHHH------H-HHcC--CCeEE
Q 006633 219 IRTAIDTGCGVASWGAYLMSR---------------------NILAVSFAPRDTHEAQVQF------A-LERG--VPALI 268 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~---------------------~v~~vdisp~Dls~a~i~~------A-~erg--~~~~~ 268 (637)
..+|+|+||++|..+..+... .+..-|+...|.+.-.... . .+.+ .+..|
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 458999999999888776544 1223345445553222111 1 1222 23344
Q ss_pred EEec---cccCCCCCCCeeEEEeccccccCCcCCH-----------------------H---------------HHHHHH
Q 006633 269 GVMA---SIRLPYPSRAFDMAHCSRCLIPWGQYAD-----------------------G---------------LYLIEV 307 (637)
Q Consensus 269 ~~~d---~~~Lpfpd~sFDlV~~s~~L~h~~~~d~-----------------------~---------------~~L~ei 307 (637)
..+. ...-.||+++||+|+++.+| ||...-+ . .+|+..
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aL-HWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCL-HWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCT-TBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEeccee-eecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433 33456899999999999999 8865211 0 126666
Q ss_pred HhcccCCeEEEEEeC
Q 006633 308 DRVLRPGGYWILSGP 322 (637)
Q Consensus 308 ~RvLKPGG~Lvls~p 322 (637)
.+.|+|||.++++..
T Consensus 212 a~eL~pGG~mvl~~~ 226 (384)
T 2efj_A 212 SEELISRGRMLLTFI 226 (384)
T ss_dssp HHHEEEEEEEEEEEE
T ss_pred HHHhccCCeEEEEEe
Confidence 899999999999965
No 422
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.93 E-value=2.7e-05 Score=83.79 Aligned_cols=116 Identities=14% Similarity=0.041 Sum_probs=75.8
Q ss_pred HHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc------------------------------------------C
Q 006633 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR------------------------------------------N 240 (637)
Q Consensus 203 ~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~------------------------------------------~ 240 (637)
.+...+..+....++ ..|||++||+|.++..++.. .
T Consensus 182 ~lAa~ll~~~~~~~~--~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 259 (385)
T 3ldu_A 182 TLAAGLIYLTPWKAG--RVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK 259 (385)
T ss_dssp HHHHHHHHTSCCCTT--SCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred HHHHHHHHhhCCCCC--CeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence 344455555554443 48999999999998877653 2
Q ss_pred CEEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccCCCCCCCeeEEEeccccccCCc--CCHHHHHHHHHhcccC--C
Q 006633 241 ILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQ--YADGLYLIEVDRVLRP--G 314 (637)
Q Consensus 241 v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~--~d~~~~L~ei~RvLKP--G 314 (637)
+.++|+++..+..+..+. ...++ .+.+...|...++.+ .+||+|+++.-+..-.. ++...+..++.++||+ |
T Consensus 260 V~GvDid~~ai~~Ar~Na-~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g 337 (385)
T 3ldu_A 260 IYGYDIDEESIDIARENA-EIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKN 337 (385)
T ss_dssp EEEEESCHHHHHHHHHHH-HHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBS
T ss_pred EEEEECCHHHHHHHHHHH-HHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCC
Confidence 566766655444433322 23354 478899998888765 58999999875421111 1345677777778877 8
Q ss_pred eEEEEEeC
Q 006633 315 GYWILSGP 322 (637)
Q Consensus 315 G~Lvls~p 322 (637)
|.+++.++
T Consensus 338 ~~~~iit~ 345 (385)
T 3ldu_A 338 WSYYLITS 345 (385)
T ss_dssp CEEEEEES
T ss_pred CEEEEEEC
Confidence 88887765
No 423
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.92 E-value=1.7e-05 Score=79.54 Aligned_cols=130 Identities=12% Similarity=0.107 Sum_probs=77.4
Q ss_pred ceeEeeecccchhhhhhhcCC-----CeEEEEeccCCCCcchhHHHHhhcc---cchhh-ccccccCCC-----CCccce
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-----PLWVMNTVPVEAKINTLGVIYERGL---IGTYQ-NWCEAMSTY-----PRTYDL 543 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-----~v~~mnv~~~~~~~~~l~~~~eRgl---~~~~~-~wce~~~~y-----p~t~Dl 543 (637)
.++|||+|||+|.++.+|++. .|+.+-+.|.-.. ...+.+-+.|+ |-+++ |..+.+..+ +.+||+
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~-~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~ 139 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTK-HAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDF 139 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCC-CSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHH-HHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeE
Confidence 568999999999999998762 2444444443222 22233334465 22322 222323333 478999
Q ss_pred eeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH------------HHHHHHHHH----HhcCCceeEEeccCCC
Q 006633 544 IHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV------------DILVKIKSI----TDGMEWEGRIADHENG 607 (637)
Q Consensus 544 ~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~------------~~~~~~~~~----~~~~~W~~~~~~~e~~ 607 (637)
|.+++. .-....+|-++-|+|||||.+++.|-. .....++++ ...=+++..+...
T Consensus 140 V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~--- 210 (242)
T 3r3h_A 140 IFIDAD------KTNYLNYYELALKLVTPKGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLLAI--- 210 (242)
T ss_dssp EEEESC------GGGHHHHHHHHHHHEEEEEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEESS---
T ss_pred EEEcCC------hHHhHHHHHHHHHhcCCCeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEEEc---
Confidence 988653 223567888999999999999995321 122233333 3444566655432
Q ss_pred CCCcceEEEEEec
Q 006633 608 PRQREKILFANKK 620 (637)
Q Consensus 608 ~~~~~~~l~~~K~ 620 (637)
.+.+++++|+
T Consensus 211 ---~dG~~~~~k~ 220 (242)
T 3r3h_A 211 ---ADGMFLVQPI 220 (242)
T ss_dssp ---SSCEEEEEEC
T ss_pred ---cCceEEEEEc
Confidence 4678888873
No 424
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.92 E-value=1.3e-05 Score=79.24 Aligned_cols=106 Identities=13% Similarity=0.142 Sum_probs=75.2
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCC-C-Cccceeeec
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTY-P-RTYDLIHAD 547 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~y-p-~t~Dl~H~~ 547 (637)
..+|||+|||.|.++.+|++. ..+|+.+|.++..+..+.++ |+ +...+ |+.+ .. + ..||+|-+
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~D~v~~- 164 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKD---AEVPEGIFHAAFV- 164 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTT---SCCCTTCBSEEEE-
T ss_pred CCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhh---cccCCCcccEEEE-
Confidence 568999999999999999876 24667778777888888776 33 22222 2222 22 3 68999876
Q ss_pred cccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-HHHHHHHHHHHhcCCce
Q 006633 548 SIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-VDILVKIKSITDGMEWE 598 (637)
Q Consensus 548 ~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-~~~~~~~~~~~~~~~W~ 598 (637)
+--+...+|-++-|+|||||.+++... .+.+..+.+.++.. |.
T Consensus 165 -------~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~l~~~-f~ 208 (248)
T 2yvl_A 165 -------DVREPWHYLEKVHKSLMEGAPVGFLLPTANQVIKLLESIENY-FG 208 (248)
T ss_dssp -------CSSCGGGGHHHHHHHBCTTCEEEEEESSHHHHHHHHHHSTTT-EE
T ss_pred -------CCcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHhh-CC
Confidence 223456889999999999999999876 45666666665554 44
No 425
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.92 E-value=7.3e-06 Score=79.80 Aligned_cols=119 Identities=14% Similarity=0.086 Sum_probs=73.4
Q ss_pred CceeEeeecccchhhhhhhcCCC-eEEEEeccCCCCcchhHHHH--------hhcc--cchhhccccccCCCC-Ccccee
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDP-LWVMNTVPVEAKINTLGVIY--------ERGL--IGTYQNWCEAMSTYP-RTYDLI 544 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~-v~~mnv~~~~~~~~~l~~~~--------eRgl--~~~~~~wce~~~~yp-~t~Dl~ 544 (637)
...+|||+|||+|.++.+|++.. - -+|+.+|.++.++..+. .+|+ +-..+.=.+.++ ++ .+ |.+
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~--~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~-~~~~~-d~v 102 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPS--RLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLP-PLSGV-GEL 102 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTT--EEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCC-SCCCE-EEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCC-CCCCC-CEE
Confidence 36789999999999999998761 1 35667777777887532 2444 222221112222 33 44 766
Q ss_pred eeccccccCC----CCcCHHHHHHHHhhcccCCcEEEEEeC------------------HH-HHHHHHHHHhcCCceeEE
Q 006633 545 HADSIFSLYK----DRCEMEDVLLEMDRILRPEGSVIIRDD------------------VD-ILVKIKSITDGMEWEGRI 601 (637)
Q Consensus 545 H~~~lfs~~~----~~c~~~~~l~e~dRiLrPgG~~i~~d~------------------~~-~~~~~~~~~~~~~W~~~~ 601 (637)
.. +|+... +.-+.+.+|-|+-|+|||||.+++... .. ....+.+++..-.|++.-
T Consensus 103 ~~--~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~ 180 (218)
T 3mq2_A 103 HV--LMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLAD 180 (218)
T ss_dssp EE--ESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEE
T ss_pred EE--EccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCcee
Confidence 62 232100 111226899999999999999999621 11 233477777777887653
No 426
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=97.92 E-value=1.6e-05 Score=81.34 Aligned_cols=102 Identities=11% Similarity=0.021 Sum_probs=72.0
Q ss_pred CceeEeeecccc---hhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhhc----ccchhh-ccccc-----c----CCCC
Q 006633 477 RYRNLLDMNAYL---GGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERG----LIGTYQ-NWCEA-----M----STYP 538 (637)
Q Consensus 477 ~~r~vlD~~~g~---ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRg----l~~~~~-~wce~-----~----~~yp 538 (637)
.++.|||+|||+ |.+...+... += ..|+.+|.++.+|..+.++- -+..++ |..+. . ..+|
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~--~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPD--ARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTT--CEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCC--CEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCC
Confidence 478999999999 9887666432 21 25677788778888887762 122221 22110 0 1354
Q ss_pred -CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006633 539 -RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 581 (637)
Q Consensus 539 -~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 581 (637)
.+||+|-+.++|-...+. +...+|-|+-|+|||||+++|.+.
T Consensus 155 ~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 155 FSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMTSL 197 (274)
T ss_dssp TTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEEEe
Confidence 589999988888776665 788999999999999999999864
No 427
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.92 E-value=1e-06 Score=95.27 Aligned_cols=126 Identities=15% Similarity=0.162 Sum_probs=80.5
Q ss_pred HHHHHHhhhccCCCCCceeEeeeccc------chhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhhcccchhh-cccc
Q 006633 462 VTYYKSVDYQLAQPGRYRNLLDMNAY------LGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYERGLIGTYQ-NWCE 532 (637)
Q Consensus 462 v~~y~~~~~~l~~~~~~r~vlD~~~g------~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~-~wce 532 (637)
...|.+++..+.. +..+|||+||| +||....|.++ += ..|+.+|.++.+. ....-|-++. |- +
T Consensus 203 ~~~Ye~lL~~l~~--~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~--a~V~GVDiSp~m~---~~~~rI~fv~GDa-~ 274 (419)
T 3sso_A 203 TPHYDRHFRDYRN--QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPR--GQIYGLDIMDKSH---VDELRIRTIQGDQ-N 274 (419)
T ss_dssp HHHHHHHHGGGTT--SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTT--CEEEEEESSCCGG---GCBTTEEEEECCT-T
T ss_pred HHHHHHHHHhhcC--CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCC--CEEEEEECCHHHh---hcCCCcEEEEecc-c
Confidence 4567777766543 35799999999 78887777643 11 2445555554542 1111122222 21 1
Q ss_pred ccCCC------CCccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH------------------HHHHHH
Q 006633 533 AMSTY------PRTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV------------------DILVKI 588 (637)
Q Consensus 533 ~~~~y------p~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~------------------~~~~~~ 588 (637)
.++.- +.+||+|.+++.. + -.+....|.|+-|+|||||+++|.|-. .+++.+
T Consensus 275 dlpf~~~l~~~d~sFDlVisdgsH--~--~~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~l 350 (419)
T 3sso_A 275 DAEFLDRIARRYGPFDIVIDDGSH--I--NAHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLL 350 (419)
T ss_dssp CHHHHHHHHHHHCCEEEEEECSCC--C--HHHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHH
T ss_pred ccchhhhhhcccCCccEEEECCcc--c--chhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHH
Confidence 21111 3789999987542 1 235678999999999999999997432 367888
Q ss_pred HHHHhcCCcee
Q 006633 589 KSITDGMEWEG 599 (637)
Q Consensus 589 ~~~~~~~~W~~ 599 (637)
++++..+.|.-
T Consensus 351 k~l~D~l~~~~ 361 (419)
T 3sso_A 351 KSLIDAIQHQE 361 (419)
T ss_dssp HHHHHHHTGGG
T ss_pred HHHHHHhcccc
Confidence 88888888764
No 428
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.92 E-value=6.6e-05 Score=80.81 Aligned_cols=116 Identities=16% Similarity=0.064 Sum_probs=76.0
Q ss_pred HHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--C----------------------------------------
Q 006633 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--N---------------------------------------- 240 (637)
Q Consensus 203 ~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~---------------------------------------- 240 (637)
.+...+..+....++ ..+||.+||+|.++...+.. +
T Consensus 181 ~LAaall~l~~~~~~--~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 258 (384)
T 3ldg_A 181 NMAAAIILLSNWFPD--KPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLD 258 (384)
T ss_dssp HHHHHHHHHTTCCTT--SCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred HHHHHHHHHhCCCCC--CeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCce
Confidence 344445555554443 48999999999998776643 2
Q ss_pred CEEEEcCccccHHHHHHHHHHcCC--CeEEEEeccccCCCCCCCeeEEEecccccc-CCc-CCHHHHHHHHHhcccC--C
Q 006633 241 ILAVSFAPRDTHEAQVQFALERGV--PALIGVMASIRLPYPSRAFDMAHCSRCLIP-WGQ-YADGLYLIEVDRVLRP--G 314 (637)
Q Consensus 241 v~~vdisp~Dls~a~i~~A~erg~--~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h-~~~-~d~~~~L~ei~RvLKP--G 314 (637)
++++|+++..+..+..+ +...++ .+.+...|...++.+ .+||+|+++.-+.. +.. ++...+..++.+.||+ |
T Consensus 259 v~GvDid~~al~~Ar~N-a~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g 336 (384)
T 3ldg_A 259 ISGFDFDGRMVEIARKN-AREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKT 336 (384)
T ss_dssp EEEEESCHHHHHHHHHH-HHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTT
T ss_pred EEEEECCHHHHHHHHHH-HHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCC
Confidence 66777765444433332 223454 378999999888865 48999999864421 111 1455677777778877 8
Q ss_pred eEEEEEeC
Q 006633 315 GYWILSGP 322 (637)
Q Consensus 315 G~Lvls~p 322 (637)
|.+++.++
T Consensus 337 ~~~~iit~ 344 (384)
T 3ldg_A 337 WSQFILTN 344 (384)
T ss_dssp SEEEEEES
T ss_pred cEEEEEEC
Confidence 88888765
No 429
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.89 E-value=8.4e-06 Score=85.05 Aligned_cols=96 Identities=14% Similarity=0.064 Sum_probs=57.3
Q ss_pred ceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHH-h-hcc--cchhhcccc-ccCCC-CCccceeeecccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIY-E-RGL--IGTYQNWCE-AMSTY-PRTYDLIHADSIF 550 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~-e-Rgl--~~~~~~wce-~~~~y-p~t~Dl~H~~~lf 550 (637)
..+|||+|||.|+|..+|+++ .|..+-+.....+ .++..+. + .|. +-+.. . .+... +.+||+|.|+..|
T Consensus 83 g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~-~~~~~~~~~~~~~~~v~~~~---~~D~~~l~~~~fD~V~sd~~~ 158 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGP-GHEEPIPMSTYGWNLVRLQS---GVDVFFIPPERCDTLLCDIGE 158 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCST-TSCCCCCCCSTTGGGEEEEC---SCCTTTSCCCCCSEEEECCCC
T ss_pred CCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCch-hHHHHHHhhhcCCCCeEEEe---ccccccCCcCCCCEEEECCcc
Confidence 579999999999999999887 3544433111111 1111110 1 111 11221 2 23333 4799999998877
Q ss_pred ccCCCCcCHH-----HHHHHHhhcccCCcEEEEE
Q 006633 551 SLYKDRCEME-----DVLLEMDRILRPEGSVIIR 579 (637)
Q Consensus 551 s~~~~~c~~~-----~~l~e~dRiLrPgG~~i~~ 579 (637)
+... ..++ .+|.++.|+|||||.|++.
T Consensus 159 ~~g~--~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 159 SSPN--PTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp CCSS--HHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred ccCc--chhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 5211 1111 4788899999999999996
No 430
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=97.89 E-value=8.2e-06 Score=84.05 Aligned_cols=131 Identities=11% Similarity=0.197 Sum_probs=87.6
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCCCCcc---ceeee
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYPRTY---DLIHA 546 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~yp~t~---Dl~H~ 546 (637)
..+|||+|||.|.++.+|++.+- .+|+.+|.++..+.++.++ |+ +-+++ ||.+. .+..| |+|-+
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~~~--~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~---~~~~f~~~D~Ivs 198 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKFSD--AIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---FKEKFASIEMILS 198 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHHSS--CEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---GGGGTTTCCEEEE
T ss_pred CCEEEEEeCchhHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh---cccccCCCCEEEE
Confidence 34799999999999999976632 3566777777888887664 44 33333 55443 34688 99988
Q ss_pred cccccc----------CC------CCcCHHHHHHHHh-hcccCCcEEEEEeCHHHHHHHHHHHhcCCceeEEeccCCCCC
Q 006633 547 DSIFSL----------YK------DRCEMEDVLLEMD-RILRPEGSVIIRDDVDILVKIKSITDGMEWEGRIADHENGPR 609 (637)
Q Consensus 547 ~~lfs~----------~~------~~c~~~~~l~e~d-RiLrPgG~~i~~d~~~~~~~~~~~~~~~~W~~~~~~~e~~~~ 609 (637)
+--+.. +. ..++-..++.++- +.|+|||++++.-..+....+.++++.. ....|..
T Consensus 199 nPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~~~~q~~~v~~~~~~~---~~~~D~~---- 271 (284)
T 1nv8_A 199 NPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIVSDT---VFLKDSA---- 271 (284)
T ss_dssp CCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEECCTTCHHHHTTTSTTC---EEEECTT----
T ss_pred cCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHHhC---CeecccC----
Confidence 622211 10 1122237889999 9999999999976666667777776665 3333433
Q ss_pred CcceEEEEEec
Q 006633 610 QREKILFANKK 620 (637)
Q Consensus 610 ~~~~~l~~~K~ 620 (637)
+.+++++++++
T Consensus 272 g~~R~~~~~~k 282 (284)
T 1nv8_A 272 GKYRFLLLNRR 282 (284)
T ss_dssp SSEEEEEEECC
T ss_pred CCceEEEEEEc
Confidence 46788888775
No 431
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.89 E-value=2.5e-05 Score=83.31 Aligned_cols=99 Identities=13% Similarity=0.112 Sum_probs=66.9
Q ss_pred CCCEEEEECCCCchHHHHHhhcC---CEEEEcCccccHHHHHHHHHHcCC-------------CeEEEEeccccCCC---
Q 006633 218 SIRTAIDTGCGVASWGAYLMSRN---ILAVSFAPRDTHEAQVQFALERGV-------------PALIGVMASIRLPY--- 278 (637)
Q Consensus 218 ~~r~VLDIGCGtG~~a~~La~~~---v~~vdisp~Dls~a~i~~A~erg~-------------~~~~~~~d~~~Lpf--- 278 (637)
.+++|||||||+|.+++.+++++ ++++++ ++..++.|++... .+.+...|+....-
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEI-----D~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~ 262 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEI-----DQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYA 262 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEES-----CHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEEC-----CHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhh
Confidence 46799999999999999998874 445544 5566666665421 36777777654321
Q ss_pred -CCCCeeEEEeccccccCCc----CCHHHHHHHH----HhcccCCeEEEEEe
Q 006633 279 -PSRAFDMAHCSRCLIPWGQ----YADGLYLIEV----DRVLRPGGYWILSG 321 (637)
Q Consensus 279 -pd~sFDlV~~s~~L~h~~~----~d~~~~L~ei----~RvLKPGG~Lvls~ 321 (637)
.++.||+|++...-.+... -....+++++ .++|+|||.+++..
T Consensus 263 ~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 263 KEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp HHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 3578999998542212211 0224566666 89999999999974
No 432
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.88 E-value=1.3e-05 Score=79.59 Aligned_cols=130 Identities=15% Similarity=0.151 Sum_probs=80.6
Q ss_pred ceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCCC-----Cccce
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-----RTYDL 543 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~yp-----~t~Dl 543 (637)
.++|||+|||.|.++.+|++. +- .-.|+.+|.++..+..+.++ |+ |-++. |..+.+..+| .+||+
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~-~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPP-DGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCT-TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 458999999999999998764 10 01345556666677776654 54 22222 2222222232 68999
Q ss_pred eeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC------------HHHHHHHHH----HHhcCCceeEEeccCCC
Q 006633 544 IHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD------------VDILVKIKS----ITDGMEWEGRIADHENG 607 (637)
Q Consensus 544 ~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~------------~~~~~~~~~----~~~~~~W~~~~~~~e~~ 607 (637)
|.++.. .-....++-++-|+|||||.+++.+- ......+++ +...-+++..+...
T Consensus 152 V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~--- 222 (232)
T 3cbg_A 152 IFIDAD------KRNYPRYYEIGLNLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVIPL--- 222 (232)
T ss_dssp EEECSC------GGGHHHHHHHHHHTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEECS---
T ss_pred EEECCC------HHHHHHHHHHHHHHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEEEc---
Confidence 987543 23457889999999999999999532 112233333 34445666666532
Q ss_pred CCCcceEEEEEec
Q 006633 608 PRQREKILFANKK 620 (637)
Q Consensus 608 ~~~~~~~l~~~K~ 620 (637)
.+.+.+++|+
T Consensus 223 ---~dG~~~~~~~ 232 (232)
T 3cbg_A 223 ---GDGMTLALKK 232 (232)
T ss_dssp ---BTCEEEEEEC
T ss_pred ---CCeEEEEEeC
Confidence 3568888874
No 433
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=97.88 E-value=1.3e-05 Score=84.51 Aligned_cols=102 Identities=15% Similarity=0.245 Sum_probs=69.1
Q ss_pred cCCCCCceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhh----cccchhhccccccC--CCCCccce
Q 006633 472 LAQPGRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GLIGTYQNWCEAMS--TYPRTYDL 543 (637)
Q Consensus 472 l~~~~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gl~~~~~~wce~~~--~yp~t~Dl 543 (637)
+.. ....+|||+|||.|.++.+|+++ ++ .++.+|. +.++..+.++ |+-+-+.-.+..+. ++|. +|+
T Consensus 186 ~~~-~~~~~vLDvG~G~G~~~~~l~~~~p~~---~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~D~ 259 (359)
T 1x19_A 186 AKL-DGVKKMIDVGGGIGDISAAMLKHFPEL---DSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE-ADA 259 (359)
T ss_dssp CCC-TTCCEEEEESCTTCHHHHHHHHHCTTC---EEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCC-CSE
T ss_pred cCC-CCCCEEEEECCcccHHHHHHHHHCCCC---eEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCC-CCE
Confidence 444 45789999999999999999764 22 3344455 4777777665 55321111112222 3444 499
Q ss_pred eeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 544 IHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 544 ~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
|.+..++..+.+ -....+|-++-|+|||||.++|.|
T Consensus 260 v~~~~vlh~~~d-~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 260 VLFCRILYSANE-QLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp EEEESCGGGSCH-HHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred EEEechhccCCH-HHHHHHHHHHHHhcCCCCEEEEEe
Confidence 999888775543 135789999999999999999876
No 434
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.88 E-value=2.4e-05 Score=80.35 Aligned_cols=85 Identities=12% Similarity=0.121 Sum_probs=60.9
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--CCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--NILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYP 279 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfp 279 (637)
...++.+.+.+...+ + +|||||||+|.++..|+++ .++++|+++..+.....+.. ..++.+..+|...++++
T Consensus 33 ~~i~~~Iv~~~~~~~--~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~---~~~v~vi~~D~l~~~~~ 106 (271)
T 3fut_A 33 EAHLRRIVEAARPFT--G-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLS---GLPVRLVFQDALLYPWE 106 (271)
T ss_dssp HHHHHHHHHHHCCCC--S-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTT---TSSEEEEESCGGGSCGG
T ss_pred HHHHHHHHHhcCCCC--C-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC---CCCEEEEECChhhCChh
Confidence 345667777776544 4 8999999999999999998 46777776654443322221 24688999999888876
Q ss_pred CC-CeeEEEecccc
Q 006633 280 SR-AFDMAHCSRCL 292 (637)
Q Consensus 280 d~-sFDlV~~s~~L 292 (637)
+. .+|.|+++.-+
T Consensus 107 ~~~~~~~iv~NlPy 120 (271)
T 3fut_A 107 EVPQGSLLVANLPY 120 (271)
T ss_dssp GSCTTEEEEEEECS
T ss_pred hccCccEEEecCcc
Confidence 53 68999998744
No 435
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.88 E-value=1.3e-05 Score=79.47 Aligned_cols=130 Identities=12% Similarity=0.150 Sum_probs=81.6
Q ss_pred ceeEeeecccchhhhhhhcCC-C-eEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCC-----------
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-P-LWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMST----------- 536 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~-v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~----------- 536 (637)
..+|||+|||.|.++.+|++. + - -+|+.+|.++..+..+.++ |+ +-+.+ |..+.+..
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~ 138 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPED--GKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWA 138 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGG
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccc
Confidence 458999999999999998764 1 1 2445556666677777665 54 22221 22121111
Q ss_pred --C--C-CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC------------HHHHHH----HHHHHhcC
Q 006633 537 --Y--P-RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD------------VDILVK----IKSITDGM 595 (637)
Q Consensus 537 --y--p-~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~------------~~~~~~----~~~~~~~~ 595 (637)
| + .+||+|.++.. .-..+.+|-++-|+|||||.+++.+- ...... .+.+.+.-
T Consensus 139 ~~f~~~~~~fD~I~~~~~------~~~~~~~l~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (239)
T 2hnk_A 139 SDFAFGPSSIDLFFLDAD------KENYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYNDS 212 (239)
T ss_dssp TTTCCSTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCT
T ss_pred ccccCCCCCcCEEEEeCC------HHHHHHHHHHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHHhhCC
Confidence 2 2 68999987532 23456889999999999999999751 112222 33344556
Q ss_pred CceeEEeccCCCCCCcceEEEEEecC
Q 006633 596 EWEGRIADHENGPRQREKILFANKKY 621 (637)
Q Consensus 596 ~W~~~~~~~e~~~~~~~~~l~~~K~~ 621 (637)
++.+...-. .+.+.+++|++
T Consensus 213 ~~~~~~~p~------~~g~~~~~~~~ 232 (239)
T 2hnk_A 213 LVDVSLVPI------ADGVSLVRKRL 232 (239)
T ss_dssp TEEEEEECS------TTCEEEEEECC
T ss_pred CeEEEEEEc------CCceEeeeehh
Confidence 677666533 24588888876
No 436
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.87 E-value=6.8e-06 Score=79.85 Aligned_cols=99 Identities=13% Similarity=0.125 Sum_probs=68.5
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc--cchhh-ccccccCCCCCccceeeecccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTYPRTYDLIHADSIF 550 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~-~wce~~~~yp~t~Dl~H~~~lf 550 (637)
..+|||+|||+|.++.+++.++. -.|+.+|.++.++..+.++ |+ +-+++ |..+.....+.+||+|-++..|
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~--~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~ 132 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYA--AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPF 132 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC--SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSS
T ss_pred CCeEEEeCCCcCHHHHHHHhcCC--CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCC
Confidence 35899999999999998766653 2677888887888887654 33 33333 3222222234789999887665
Q ss_pred ccCCCCcCHHHHHHHHh--hcccCCcEEEEEeCH
Q 006633 551 SLYKDRCEMEDVLLEMD--RILRPEGSVIIRDDV 582 (637)
Q Consensus 551 s~~~~~c~~~~~l~e~d--RiLrPgG~~i~~d~~ 582 (637)
. .-..+.++-++. |+|+|||.+++....
T Consensus 133 ~----~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 133 R----RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp S----TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred C----CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 4 234567777775 579999999998654
No 437
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.86 E-value=4.7e-07 Score=89.71 Aligned_cols=95 Identities=12% Similarity=0.169 Sum_probs=67.9
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCCCCccceeeeccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYPRTYDLIHADSI 549 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~yp~t~Dl~H~~~l 549 (637)
..+|||+|||.|+++.+|++.+ ..|+.+|.++.++..+.++ |+ +-+++ |+.+ +. -+.+||+|.++..
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~-~~~~~D~v~~~~~ 153 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLL-LA-SFLKADVVFLSPP 153 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH-HG-GGCCCSEEEECCC
T ss_pred CCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHH-hc-ccCCCCEEEECCC
Confidence 5689999999999999999886 4677778877788877654 33 22232 2222 11 2379999999887
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 550 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 550 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
|...... ...+.|+.|+|+|||.+|+..
T Consensus 154 ~~~~~~~---~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 154 WGGPDYA---TAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp CSSGGGG---GSSSBCTTTSCSSCHHHHHHH
T ss_pred cCCcchh---hhHHHHHHhhcCCcceeHHHH
Confidence 7753322 236678999999999987754
No 438
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.86 E-value=5.9e-06 Score=85.02 Aligned_cols=95 Identities=14% Similarity=0.082 Sum_probs=55.7
Q ss_pred ceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhhcc--------cchhhccccccCCC-CCccceeeec
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERGL--------IGTYQNWCEAMSTY-PRTYDLIHAD 547 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRgl--------~~~~~~wce~~~~y-p~t~Dl~H~~ 547 (637)
..+|||+|||.|+|+.+|+++ .|+.+-+.|. +..+.++.+ +-.+.+ +..+..+ +.+||+|-|+
T Consensus 83 g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~m------~~~a~~~~~~~~~~~~~v~~~~~-~~D~~~l~~~~fD~Vvsd 155 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQPNVREVKAYTL------GTSGHEKPRLVETFGWNLITFKS-KVDVTKMEPFQADTVLCD 155 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTSTTEEEEEEECC------CCTTSCCCCCCCCTTGGGEEEEC-SCCGGGCCCCCCSEEEEC
T ss_pred CCEEEEeccCCCHHHHHHHHcCCEEEEECchh------hhhhhhchhhhhhcCCCeEEEec-cCcHhhCCCCCcCEEEEC
Confidence 678999999999999999876 4555555442 111111111 111100 1122223 4899999986
Q ss_pred cccccCCCCcCHH---HHHHHHhhcccCCc--EEEEE
Q 006633 548 SIFSLYKDRCEME---DVLLEMDRILRPEG--SVIIR 579 (637)
Q Consensus 548 ~lfs~~~~~c~~~---~~l~e~dRiLrPgG--~~i~~ 579 (637)
..+......-+.. .+|-++.|+||||| .|++.
T Consensus 156 ~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 156 IGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred CCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 5522111000001 36888999999999 99985
No 439
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.86 E-value=3.5e-05 Score=78.91 Aligned_cols=143 Identities=11% Similarity=0.131 Sum_probs=86.4
Q ss_pred CceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh------cc----cchhh-ccccccCCCCCcccee
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER------GL----IGTYQ-NWCEAMSTYPRTYDLI 544 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR------gl----~~~~~-~wce~~~~yp~t~Dl~ 544 (637)
..++|||+|||.|+++.+++++ ++ ..|+-+|..+..+.++.+. ++ +.+++ |--+.+...+.+||+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I 152 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSV--KKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI 152 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTC--SEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCC--ceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence 3689999999999999999887 55 3445555555677777664 22 11222 1111122235899999
Q ss_pred eeccccccCCC-CcCHHHHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCceeEEeccC--CCCCCcceEEE
Q 006633 545 HADSIFSLYKD-RCEMEDVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIADHE--NGPRQREKILF 616 (637)
Q Consensus 545 H~~~lfs~~~~-~c~~~~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~e--~~~~~~~~~l~ 616 (637)
-++........ .-....++-++-|+|+|||.+++.. ..+.+..+.+.++..=-.+...... .-+.+...+++
T Consensus 153 i~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~~~~ 232 (275)
T 1iy9_A 153 MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFTI 232 (275)
T ss_dssp EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEECCTTSGGGCEEEEE
T ss_pred EECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCccccHHHHHHHHHHHHHhCCCeEEEEEecCcccCcceEEEE
Confidence 98644322111 1112578899999999999999972 2344555555555553344433211 11123467889
Q ss_pred EEecC
Q 006633 617 ANKKY 621 (637)
Q Consensus 617 ~~K~~ 621 (637)
|.|++
T Consensus 233 ask~~ 237 (275)
T 1iy9_A 233 GSKKY 237 (275)
T ss_dssp EESSC
T ss_pred eeCCC
Confidence 99974
No 440
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.85 E-value=3.5e-05 Score=76.25 Aligned_cols=129 Identities=9% Similarity=0.056 Sum_probs=81.2
Q ss_pred ceeEeeecccchhhhhhhcCC---CeEEEEeccCCCCcchhHHHHhh----ccc----chhh-ccccccCCC-CCcccee
Q 006633 478 YRNLLDMNAYLGGFAAALVDD---PLWVMNTVPVEAKINTLGVIYER----GLI----GTYQ-NWCEAMSTY-PRTYDLI 544 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~---~v~~mnv~~~~~~~~~l~~~~eR----gl~----~~~~-~wce~~~~y-p~t~Dl~ 544 (637)
..+|||+|||+|.++.+|++. +- .|+.+|.++.++..+.++ |+- -+++ |..+.+..+ +.+||+|
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~---~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V 133 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLADNT---TLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLV 133 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSCTTS---EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCCCCC---EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeE
Confidence 448999999999999988752 22 345556666677666543 432 2222 222333445 4899999
Q ss_pred eeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC------------HHHHHHHHHHHhcCCce----eEEeccCCCC
Q 006633 545 HADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD------------VDILVKIKSITDGMEWE----GRIADHENGP 608 (637)
Q Consensus 545 H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~------------~~~~~~~~~~~~~~~W~----~~~~~~e~~~ 608 (637)
-++.. .-....++-++-|+|||||.+++.+- ......++++.+.+++. ..+..
T Consensus 134 ~~d~~------~~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp----- 202 (221)
T 3dr5_A 134 FGQVS------PMDLKALVDAAWPLLRRGGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLP----- 202 (221)
T ss_dssp EECCC------TTTHHHHHHHHHHHEEEEEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEES-----
T ss_pred EEcCc------HHHHHHHHHHHHHHcCCCcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEee-----
Confidence 87542 23456789999999999999999421 11233445555555444 33321
Q ss_pred CCcceEEEEEecC
Q 006633 609 RQREKILFANKKY 621 (637)
Q Consensus 609 ~~~~~~l~~~K~~ 621 (637)
..+.+++++|.+
T Consensus 203 -~gdGl~~~~~~~ 214 (221)
T 3dr5_A 203 -LGAGLTVVTKAL 214 (221)
T ss_dssp -STTCEEEEEECC
T ss_pred -ccchHHHHHHHH
Confidence 257899999876
No 441
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.83 E-value=1.5e-05 Score=83.45 Aligned_cols=112 Identities=11% Similarity=0.073 Sum_probs=66.1
Q ss_pred ceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhhcc-----------------cchhh-ccccccCCCC
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERGL-----------------IGTYQ-NWCEAMSTYP 538 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRgl-----------------~~~~~-~wce~~~~yp 538 (637)
..+|||+|||.|.++.+|++. +- .-.|+.+|.++..+..+.++.- +-+++ |..+....++
T Consensus 106 g~~VLDiG~G~G~~~~~la~~~g~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~ 184 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSKAVGS-QGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIK 184 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred CCEEEEeCCCcCHHHHHHHHHhCC-CceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccC
Confidence 568999999999999998764 10 0134455666677777766421 22222 3333322455
Q ss_pred -CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-HHHHHHHHHHHh--cCCce
Q 006633 539 -RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-VDILVKIKSITD--GMEWE 598 (637)
Q Consensus 539 -~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-~~~~~~~~~~~~--~~~W~ 598 (637)
.+||+|.++. .....+|-++-|+|||||.+++... .+.+.++.+.++ ...|.
T Consensus 185 ~~~fD~V~~~~--------~~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~l~~~~~~~~ 240 (336)
T 2b25_A 185 SLTFDAVALDM--------LNPHVTLPVFYPHLKHGGVCAVYVVNITQVIELLDGIRTCELALS 240 (336)
T ss_dssp ---EEEEEECS--------SSTTTTHHHHGGGEEEEEEEEEEESSHHHHHHHHHHHHHHTCCEE
T ss_pred CCCeeEEEECC--------CCHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHHHhcCCCcc
Confidence 6899998732 2223478899999999999998754 334444444333 34444
No 442
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=97.83 E-value=2.7e-05 Score=79.06 Aligned_cols=109 Identities=11% Similarity=0.077 Sum_probs=75.9
Q ss_pred ceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCCC-Cccceeee
Q 006633 478 YRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYP-RTYDLIHA 546 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~yp-~t~Dl~H~ 546 (637)
..+|||+|||.|.++.+|++. +- .+|+.+|.++..+..+.++ |+ +-.++ |..+. +| ..||+|-+
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~D~V~~ 187 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGSS--GKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG---FDEKDVDALFL 187 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTTT--CEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC---CSCCSEEEEEE
T ss_pred CCEEEEECCcCCHHHHHHHHHhCCC--cEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc---ccCCccCEEEE
Confidence 568999999999999988765 11 2556667776788887766 54 22222 33332 55 68999877
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-HHHHHHHHHHHhcCCcee
Q 006633 547 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-VDILVKIKSITDGMEWEG 599 (637)
Q Consensus 547 ~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-~~~~~~~~~~~~~~~W~~ 599 (637)
+ --+...+|-++-|+|+|||.+++.+. .+.+.++.+.++...|..
T Consensus 188 ~--------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~gf~~ 233 (277)
T 1o54_A 188 D--------VPDPWNYIDKCWEALKGGGRFATVCPTTNQVQETLKKLQELPFIR 233 (277)
T ss_dssp C--------CSCGGGTHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHSSEEE
T ss_pred C--------CcCHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHCCCce
Confidence 2 22345789999999999999999876 446666666666666653
No 443
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.83 E-value=3.8e-05 Score=82.52 Aligned_cols=97 Identities=13% Similarity=0.107 Sum_probs=65.2
Q ss_pred CCEEEEECCCCchHHHHHhhc----CCEEEEcCccccHHHHHHHHHHc--------------CCC-eEEEEeccccCCC-
Q 006633 219 IRTAIDTGCGVASWGAYLMSR----NILAVSFAPRDTHEAQVQFALER--------------GVP-ALIGVMASIRLPY- 278 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~----~v~~vdisp~Dls~a~i~~A~er--------------g~~-~~~~~~d~~~Lpf- 278 (637)
+.+|||+|||+|.++..++++ .|+++|+++..+..+..+..... +.. +.+...|+..+..
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 448999999999999998876 25666665543333332222220 444 6777777654421
Q ss_pred CCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 279 PSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 279 pd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
..+.||+|+... .. ....++..+.+.|||||.++++.
T Consensus 128 ~~~~fD~I~lDP----~~--~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 128 RHRYFHFIDLDP----FG--SPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp STTCEEEEEECC----SS--CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCCEEEeCC----CC--CHHHHHHHHHHhcCCCCEEEEEe
Confidence 135799999542 22 34678999999999999988875
No 444
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.83 E-value=2.4e-05 Score=81.21 Aligned_cols=142 Identities=15% Similarity=0.124 Sum_probs=84.1
Q ss_pred CceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhhc------c----cchhh-ccccccCC-CCCccce
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERG------L----IGTYQ-NWCEAMST-YPRTYDL 543 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRg------l----~~~~~-~wce~~~~-yp~t~Dl 543 (637)
...+|||+|||.|+++..|++. ++ ..|+.+|.++..+..+.++- + +-++. |..+-... -+++||+
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv 172 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTV--EHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV 172 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence 3578999999999999999876 34 35556666667777776642 1 11222 22221112 2578999
Q ss_pred eeeccccccCCCCcC-HHHHHHHHhhcccCCcEEEEEeC-----HHHHHHHHHHHhcCCcee-EEecc--CCCCCCcceE
Q 006633 544 IHADSIFSLYKDRCE-MEDVLLEMDRILRPEGSVIIRDD-----VDILVKIKSITDGMEWEG-RIADH--ENGPRQREKI 614 (637)
Q Consensus 544 ~H~~~lfs~~~~~c~-~~~~l~e~dRiLrPgG~~i~~d~-----~~~~~~~~~~~~~~~W~~-~~~~~--e~~~~~~~~~ 614 (637)
|-++.........-. -..++-++-|+|||||.+++... ......+.+.++...+.. ..... ..-+.+.-.+
T Consensus 173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~f 252 (304)
T 3bwc_A 173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETGFASVQYALMHVPTYPCGSIGT 252 (304)
T ss_dssp EEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCEE
T ss_pred EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccchHHHHHHHHHHHhCCCCcEEEEEeecccccCcceEE
Confidence 998654322111111 15789999999999999999632 234555666555554433 33221 1112234568
Q ss_pred EEEEec
Q 006633 615 LFANKK 620 (637)
Q Consensus 615 l~~~K~ 620 (637)
++|.|.
T Consensus 253 ~~as~~ 258 (304)
T 3bwc_A 253 LVCSKK 258 (304)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 889886
No 445
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.82 E-value=1.2e-05 Score=84.87 Aligned_cols=120 Identities=18% Similarity=0.116 Sum_probs=77.2
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc----cchhhccccccCCC----CCccceee
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL----IGTYQNWCEAMSTY----PRTYDLIH 545 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl----~~~~~~wce~~~~y----p~t~Dl~H 545 (637)
..+|||+|||+|+|+.++++.+. .|+.+|.++.++..+.++ |+ +-+++.=+..+... ..+||+|-
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~ga---~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAGA---EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC---EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCcEEEcccccCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 56899999999999999988765 677888887888877664 43 22222111111111 35899987
Q ss_pred eccc-cccCC------CCcCHHHHHHHHhhcccCCcEEEEEe------C-HHHHHHHHHHHhcCCceeE
Q 006633 546 ADSI-FSLYK------DRCEMEDVLLEMDRILRPEGSVIIRD------D-VDILVKIKSITDGMEWEGR 600 (637)
Q Consensus 546 ~~~l-fs~~~------~~c~~~~~l~e~dRiLrPgG~~i~~d------~-~~~~~~~~~~~~~~~W~~~ 600 (637)
++-- |.... ..-+...++.++-|+|+|||++++.. . ......+++.++....++.
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSEEE
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCeEE
Confidence 7533 22211 11135688999999999999988753 1 2244555556666666654
No 446
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.82 E-value=2.6e-05 Score=80.70 Aligned_cols=142 Identities=14% Similarity=0.078 Sum_probs=82.5
Q ss_pred ceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh------cc----cchhh-ccccccCCCCCccceee
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER------GL----IGTYQ-NWCEAMSTYPRTYDLIH 545 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR------gl----~~~~~-~wce~~~~yp~t~Dl~H 545 (637)
..+|||+|||.|+++.+|++. ++ .+|+.+|.++..+.++.++ ++ +.+++ |..+.....+.+||+|-
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSV--EKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTC--SEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCC--CEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 479999999999999999987 44 4556666666787777664 22 11222 21111223358899998
Q ss_pred eccccc-cCC-CCcCHHHHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCceeEEecc--CCCCCCcceEEE
Q 006633 546 ADSIFS-LYK-DRCEMEDVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIADH--ENGPRQREKILF 616 (637)
Q Consensus 546 ~~~lfs-~~~-~~c~~~~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~--e~~~~~~~~~l~ 616 (637)
++.... ... ..-....++-++-|+|+|||.+++.- ..+....+.+.+++.--.+..... ..-|.+...+++
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~~ 248 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAYRRISKVFPITRVYLGFMTTYPSGMWSYTF 248 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHHHHHHHHCSEEEEEEEECTTSTTSEEEEEE
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHHHHHHHHCCceEEEEeecCccCCCceEEEE
Confidence 753211 110 00022688999999999999999962 233333433333333223333221 111224567889
Q ss_pred EEecC
Q 006633 617 ANKKY 621 (637)
Q Consensus 617 ~~K~~ 621 (637)
|.|++
T Consensus 249 as~~~ 253 (296)
T 1inl_A 249 ASKGI 253 (296)
T ss_dssp EESSC
T ss_pred ecCCC
Confidence 99974
No 447
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.80 E-value=4.7e-06 Score=81.64 Aligned_cols=93 Identities=14% Similarity=0.083 Sum_probs=60.4
Q ss_pred ceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhhc----c-------cchhh-ccccccCCCCCcccee
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERG----L-------IGTYQ-NWCEAMSTYPRTYDLI 544 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRg----l-------~~~~~-~wce~~~~yp~t~Dl~ 544 (637)
..+|||+|||.|.++..|++. +- ..+|+.+|.++.++..+.++. + +-+.+ |..+.+ .-+..||+|
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~i 155 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGC-TGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY-AEEAPYDAI 155 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC-GGGCCEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCC-CcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCc-ccCCCcCEE
Confidence 568999999999999988754 10 014555566667777765542 1 22222 222111 113689999
Q ss_pred eeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006633 545 HADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 581 (637)
Q Consensus 545 H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 581 (637)
+++..+. .++-++-|+|||||.+++...
T Consensus 156 ~~~~~~~---------~~~~~~~~~LkpgG~lv~~~~ 183 (226)
T 1i1n_A 156 HVGAAAP---------VVPQALIDQLKPGGRLILPVG 183 (226)
T ss_dssp EECSBBS---------SCCHHHHHTEEEEEEEEEEES
T ss_pred EECCchH---------HHHHHHHHhcCCCcEEEEEEe
Confidence 9866552 345688899999999999753
No 448
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.80 E-value=3.2e-05 Score=81.11 Aligned_cols=143 Identities=17% Similarity=0.144 Sum_probs=86.2
Q ss_pred ceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh------cc----cchhh-ccccccCCCCCccceee
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER------GL----IGTYQ-NWCEAMSTYPRTYDLIH 545 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR------gl----~~~~~-~wce~~~~yp~t~Dl~H 545 (637)
..+|||+|||.|+++.++++. ++ .+|+.+|.++..+.++.++ |+ +-+++ |..+.....+.+||+|-
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSV--ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 478999999999999999887 44 4566667776788887764 22 11222 22222222358899998
Q ss_pred eccccccCCCCcC-HHHHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCceeEEeccC--CCCCCcceEEEE
Q 006633 546 ADSIFSLYKDRCE-MEDVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIADHE--NGPRQREKILFA 617 (637)
Q Consensus 546 ~~~lfs~~~~~c~-~~~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~e--~~~~~~~~~l~~ 617 (637)
++..-......-. -..++-++-|+|+|||.+++.. ..+.+..+.+.++..--.+...... ..+.+.-.+++|
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~~~g~w~f~~a 274 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCC 274 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEEE
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHHCCCeEEEEEEeccccCceEEEEEe
Confidence 8642111111111 1688999999999999999953 2344555555555544444433211 111123457889
Q ss_pred EecCC
Q 006633 618 NKKYW 622 (637)
Q Consensus 618 ~K~~w 622 (637)
.|++.
T Consensus 275 s~~~~ 279 (321)
T 2pt6_A 275 SKTDT 279 (321)
T ss_dssp ESSTT
T ss_pred eCCCC
Confidence 88753
No 449
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.80 E-value=2.3e-05 Score=78.93 Aligned_cols=95 Identities=13% Similarity=0.152 Sum_probs=63.7
Q ss_pred ceeEeeecccchhhhhhhcCC-C-eEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCC------CCcc
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-P-LWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTY------PRTY 541 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~-v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~y------p~t~ 541 (637)
.++|||+|||.|.++..|++. + - -.|+.+|.++.++.++.++ |+ |-+++ |..+.+..+ +.+|
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~--~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 157 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPED--GKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSY 157 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTT--CEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCB
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCE
Confidence 468999999999999888653 1 1 2445556666677776553 55 22222 222222223 4789
Q ss_pred ceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 542 DLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 542 Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
|+|-+++- .-....++-++-|+|||||.+++.+
T Consensus 158 D~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 158 DFIFVDAD------KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp SEEEECSC------STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEcCc------hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 99987542 2346788999999999999999863
No 450
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.79 E-value=2.5e-05 Score=82.51 Aligned_cols=101 Identities=16% Similarity=0.160 Sum_probs=68.2
Q ss_pred CceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh------cc----cchhh-ccccccCCCC-Cccce
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER------GL----IGTYQ-NWCEAMSTYP-RTYDL 543 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR------gl----~~~~~-~wce~~~~yp-~t~Dl 543 (637)
..++|||+|||.|+++..|++. ++ .+|+.+|.++.++.++.++ |+ +-+++ |+.+.+..++ .+||+
T Consensus 120 ~~~~VLdIG~G~G~~a~~la~~~~~--~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDl 197 (334)
T 1xj5_A 120 NPKKVLVIGGGDGGVLREVARHASI--EQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDA 197 (334)
T ss_dssp CCCEEEEETCSSSHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEE
T ss_pred CCCEEEEECCCccHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccE
Confidence 3579999999999999999887 34 4566667776788887664 33 22222 3333233344 78999
Q ss_pred eeeccccccCCCCcC-HHHHHHHHhhcccCCcEEEEE
Q 006633 544 IHADSIFSLYKDRCE-MEDVLLEMDRILRPEGSVIIR 579 (637)
Q Consensus 544 ~H~~~lfs~~~~~c~-~~~~l~e~dRiLrPgG~~i~~ 579 (637)
|-++..-......-. ...++-++-|+|+|||.+++.
T Consensus 198 Ii~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 198 VIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 998643111111111 368899999999999999996
No 451
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.78 E-value=0.00011 Score=76.67 Aligned_cols=110 Identities=11% Similarity=-0.021 Sum_probs=66.8
Q ss_pred HHHhcccCCCCCEEEEECCCCchHHHHHhhc-----CCEEEEcCccccHHHHHHHHHHcCC-CeEEEEeccccCCCCC--
Q 006633 209 GKLINLKDGSIRTAIDTGCGVASWGAYLMSR-----NILAVSFAPRDTHEAQVQFALERGV-PALIGVMASIRLPYPS-- 280 (637)
Q Consensus 209 ~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-----~v~~vdisp~Dls~a~i~~A~erg~-~~~~~~~d~~~Lpfpd-- 280 (637)
..++...++. +|||+|||+|..+..|++. .|+++|+++..+.....+ +...+. ++.+...|...++...
T Consensus 95 ~~~l~~~~g~--~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n-~~r~g~~~v~~~~~D~~~~~~~~~~ 171 (309)
T 2b9e_A 95 AMLLDPPPGS--HVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATL-LARAGVSCCELAEEDFLAVSPSDPR 171 (309)
T ss_dssp HHHHCCCTTC--EEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHH-HHHTTCCSEEEEECCGGGSCTTCGG
T ss_pred HHHhCCCCCC--EEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHH-HHHcCCCeEEEEeCChHhcCccccc
Confidence 3445545544 9999999999999998874 256666654333322222 222344 5788888887775432
Q ss_pred -CCeeEEEec------ccccc---------CCcCCH-------HHHHHHHHhcccCCeEEEEEeC
Q 006633 281 -RAFDMAHCS------RCLIP---------WGQYAD-------GLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 281 -~sFDlV~~s------~~L~h---------~~~~d~-------~~~L~ei~RvLKPGG~Lvls~p 322 (637)
.+||.|++. ..+.. |..++. ..+|..+.++|+ ||.++.++-
T Consensus 172 ~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 172 YHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp GTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEES
T ss_pred cCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECC
Confidence 579999962 11111 111121 246778888887 999998864
No 452
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.78 E-value=6e-05 Score=78.13 Aligned_cols=143 Identities=9% Similarity=0.025 Sum_probs=80.2
Q ss_pred CceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhhc-------c----cchhh-ccccccCCCCCccce
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERG-------L----IGTYQ-NWCEAMSTYPRTYDL 543 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRg-------l----~~~~~-~wce~~~~yp~t~Dl 543 (637)
..++|||+|||.|+.+..|++. ++ -.|+-+|..+..+.++.++= + +.+++ |.-+.+...+.+||+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDv 160 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNV--ESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTC--CEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccE
Confidence 4689999999999999999887 44 34555566667888876641 1 11221 222222223478999
Q ss_pred eeeccccccCCC-CcCHHHHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCceeEEecc--CCCCCCcceEE
Q 006633 544 IHADSIFSLYKD-RCEMEDVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIADH--ENGPRQREKIL 615 (637)
Q Consensus 544 ~H~~~lfs~~~~-~c~~~~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~--e~~~~~~~~~l 615 (637)
|-++..-..... .-.-+.++-++-|+|+|||.+++.. ..+.+..+.+.++..--.+..+.. -..|.+...++
T Consensus 161 Ii~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s~~~~~~~~~~~~~~l~~~F~~v~~~~~~vp~~p~g~~~f~ 240 (294)
T 3adn_A 161 IISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGFYQAAIPTYYGGIMTFA 240 (294)
T ss_dssp EEECC----------CCHHHHHHHHHTEEEEEEEEEEEEECSSCCHHHHHHHHHHHHHCSEEEEEEEECTTSSSSEEEEE
T ss_pred EEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCCcccchHHHHHHHHHHHHHCCCeEEEEEEecccCCCceEEE
Confidence 988543221111 1112678899999999999999962 123333333333322223332211 11222345788
Q ss_pred EEEecC
Q 006633 616 FANKKY 621 (637)
Q Consensus 616 ~~~K~~ 621 (637)
+|.|.+
T Consensus 241 ~as~~~ 246 (294)
T 3adn_A 241 WATDND 246 (294)
T ss_dssp EEESCT
T ss_pred EEeCCc
Confidence 898865
No 453
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.77 E-value=3.2e-05 Score=81.01 Aligned_cols=140 Identities=11% Similarity=0.115 Sum_probs=78.4
Q ss_pred ceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh------cc----cchhh-ccccccCCCCCccceee
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER------GL----IGTYQ-NWCEAMSTYPRTYDLIH 545 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR------gl----~~~~~-~wce~~~~yp~t~Dl~H 545 (637)
.++|||+|||.|+++.+|++. ++ ..|+-+|.++..+.++.++ |+ +-+++ |..+.+..-+.+||+|-
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESV--EKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTC--CEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 579999999999999999887 34 4556666666788887765 32 11121 22121122357899999
Q ss_pred eccccccCCCCcCH-HHHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCceeEEeccCCCCC---CcceEEE
Q 006633 546 ADSIFSLYKDRCEM-EDVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIADHENGPR---QREKILF 616 (637)
Q Consensus 546 ~~~lfs~~~~~c~~-~~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~e~~~~---~~~~~l~ 616 (637)
++.........-.. ..++-++-|+|||||.+++.. ..+....+.+..+.+--.+..... .-|. +.-.+++
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~vF~~v~~~~~-~iP~~~~g~~g~~~ 265 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGESVWLHLPLIAHLVAFNRKIFPAVTYAQS-IVSTYPSGSMGYLI 265 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHHHCSEEEEEEE-ECTTSGGGEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECCCcccCHHHHHHHHHHHHHHCCcceEEEE-EecCcCCCceEEEE
Confidence 85422111111112 678899999999999999963 223334444443333223332211 1111 1225888
Q ss_pred EEec
Q 006633 617 ANKK 620 (637)
Q Consensus 617 ~~K~ 620 (637)
|.|.
T Consensus 266 ask~ 269 (314)
T 2b2c_A 266 CAKN 269 (314)
T ss_dssp EESS
T ss_pred EeCC
Confidence 8886
No 454
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=97.77 E-value=1.1e-05 Score=78.81 Aligned_cols=142 Identities=13% Similarity=0.090 Sum_probs=94.5
Q ss_pred HHHhhhccCCCCCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhc----ccchhhcccccc-CCCCC
Q 006633 465 YKSVDYQLAQPGRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERG----LIGTYQNWCEAM-STYPR 539 (637)
Q Consensus 465 y~~~~~~l~~~~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRg----l~~~~~~wce~~-~~yp~ 539 (637)
|..+...+.. ..+|||+|||+|.+|.++....=-+ .+..+|-++.++.++.++- +-.-+.- ++.. ...|.
T Consensus 40 Y~~~~~~l~~---~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~~~v~~-~d~~~~~~~~ 114 (200)
T 3fzg_A 40 YTYVFGNIKH---VSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTTIKYRF-LNKESDVYKG 114 (200)
T ss_dssp HHHHHHHSCC---CSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCSSEEEE-ECCHHHHTTS
T ss_pred HHHHHhhcCC---CCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCccEEE-ecccccCCCC
Confidence 4444444544 6799999999999999996652112 6677788888999888763 3211111 2222 23458
Q ss_pred ccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-----------HHHHHHHHHHHhcCCceeEEeccCCCC
Q 006633 540 TYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-----------VDILVKIKSITDGMEWEGRIADHENGP 608 (637)
Q Consensus 540 t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-----------~~~~~~~~~~~~~~~W~~~~~~~e~~~ 608 (637)
+||+|-+..++-...++ +..+.++-+.|||||.||--+. .......++.+..=.|.+......
T Consensus 115 ~~DvVLa~k~LHlL~~~---~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~~~--- 188 (200)
T 3fzg_A 115 TYDVVFLLKMLPVLKQQ---DVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVIG--- 188 (200)
T ss_dssp EEEEEEEETCHHHHHHT---TCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEEET---
T ss_pred CcChhhHhhHHHhhhhh---HHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeeeeeeeC---
Confidence 89987775555433322 4566789999999999998762 126677788888888888766544
Q ss_pred CCcceEEEEEe
Q 006633 609 RQREKILFANK 619 (637)
Q Consensus 609 ~~~~~~l~~~K 619 (637)
.|-+.|.+|
T Consensus 189 --nEl~y~~~~ 197 (200)
T 3fzg_A 189 --NELVYITSG 197 (200)
T ss_dssp --TEEEEEECC
T ss_pred --ceEEEEEec
Confidence 466666655
No 455
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.75 E-value=1.9e-05 Score=82.41 Aligned_cols=119 Identities=16% Similarity=0.097 Sum_probs=72.6
Q ss_pred ceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhh----cc--cchhhccccccCCCCCccceeeeccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER----GL--IGTYQNWCEAMSTYPRTYDLIHADSI 549 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~~wce~~~~yp~t~Dl~H~~~l 549 (637)
..+|||+|||.|+++.+|++. +- -.|+.+|.++.++..+.++ |+ +-+++.=.+.+..++..||+|-++--
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~~~~--~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~P 196 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLMRND--GVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAP 196 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHTTTC--SEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCC--CEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCC
Confidence 568999999999999998753 11 1355667776778777665 55 22332111223334578999998544
Q ss_pred cccCC---CCc---------C-------HHHHHHHHhhcccCCcEEEEEe----CHHHHHHHHHHHhcCCce
Q 006633 550 FSLYK---DRC---------E-------MEDVLLEMDRILRPEGSVIIRD----DVDILVKIKSITDGMEWE 598 (637)
Q Consensus 550 fs~~~---~~c---------~-------~~~~l~e~dRiLrPgG~~i~~d----~~~~~~~~~~~~~~~~W~ 598 (637)
.|... ..- + ...+|-++-|+|||||.++++. ..+....|+.+++...++
T Consensus 197 csg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~~~~~ 268 (315)
T 1ixk_A 197 CTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPEENEFVIQWALDNFDVE 268 (315)
T ss_dssp TTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGGGTHHHHHHHHHHSSEE
T ss_pred CCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChHHhHHHHHHHHhcCCCE
Confidence 33111 000 0 1478899999999999999952 122223445555555443
No 456
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.75 E-value=3.6e-05 Score=77.42 Aligned_cols=94 Identities=15% Similarity=0.079 Sum_probs=61.3
Q ss_pred CCceeEeeecccchhhhhhhcCC----C-eEEEEeccCCCCcchhHHHH----hhcccc-hhhccccccCCC---CCccc
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD----P-LWVMNTVPVEAKINTLGVIY----ERGLIG-TYQNWCEAMSTY---PRTYD 542 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~----~-v~~mnv~~~~~~~~~l~~~~----eRgl~~-~~~~wce~~~~y---p~t~D 542 (637)
....+|||+|||.|.|..+|++. + |+.+.+. +.++..+. +++.+- +..|-+. ...| +.++|
T Consensus 76 kpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s-----~~~~~~l~~~a~~~~ni~~V~~d~~~-p~~~~~~~~~vD 149 (233)
T 4df3_A 76 KEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFA-----PRVMRDLLTVVRDRRNIFPILGDARF-PEKYRHLVEGVD 149 (233)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECC-----HHHHHHHHHHSTTCTTEEEEESCTTC-GGGGTTTCCCEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCC-----HHHHHHHHHhhHhhcCeeEEEEeccC-ccccccccceEE
Confidence 45779999999999999999863 2 5555444 45665554 344333 3323332 2223 27888
Q ss_pred eeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 543 LIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 543 l~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
+|.++ +. ..-+.+.+|.|+.|+|||||.++|.+
T Consensus 150 vVf~d--~~---~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 150 GLYAD--VA---QPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEEEC--CC---CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEe--cc---CChhHHHHHHHHHHhccCCCEEEEEE
Confidence 87653 11 22245678999999999999999973
No 457
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.74 E-value=1.5e-05 Score=77.35 Aligned_cols=95 Identities=15% Similarity=0.029 Sum_probs=63.0
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc--cchhhccccccCCCC--Cccceeeecc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQNWCEAMSTYP--RTYDLIHADS 548 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~~wce~~~~yp--~t~Dl~H~~~ 548 (637)
...+|||+|||.|.++..|++..----+|+.+|.++.++..+.++ |+ +-..+ ......+| ..||+|.+++
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~--~d~~~~~~~~~~fD~v~~~~ 154 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIV--GDGTLGYEPLAPYDRIYTTA 154 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEE--SCGGGCCGGGCCEEEEEESS
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEE--CCcccCCCCCCCeeEEEECC
Confidence 356999999999999998876420001445556666788777765 33 22222 11123343 6899999977
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH
Q 006633 549 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV 582 (637)
Q Consensus 549 lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~ 582 (637)
.+.... -++-|+|||||.+++....
T Consensus 155 ~~~~~~---------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 155 AGPKIP---------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp BBSSCC---------HHHHHTEEEEEEEEEEESS
T ss_pred chHHHH---------HHHHHHcCCCcEEEEEECC
Confidence 765332 3889999999999998554
No 458
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.72 E-value=6.5e-05 Score=71.39 Aligned_cols=98 Identities=19% Similarity=0.165 Sum_probs=54.9
Q ss_pred ceeEeeecccchhhhhhhcCC-CeE-------EEEeccCCCCcchhHHHHhhcccchh-h-ccccc------cCCCC-Cc
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-PLW-------VMNTVPVEAKINTLGVIYERGLIGTY-Q-NWCEA------MSTYP-RT 540 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~v~-------~mnv~~~~~~~~~l~~~~eRgl~~~~-~-~wce~------~~~yp-~t 540 (637)
..+|||+|||.|.++.+|+++ +-- ...|+.+|.++.. . . .++ -.+ + |..+. ...++ ++
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-~--~-~~~-~~~~~~d~~~~~~~~~~~~~~~~~~ 97 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-P--L-EGA-TFLCPADVTDPRTSQRILEVLPGRR 97 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-C--C-TTC-EEECSCCTTSHHHHHHHHHHSGGGC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-c--C-CCC-eEEEeccCCCHHHHHHHHHhcCCCC
Confidence 578999999999999998764 200 0123333333211 0 0 011 111 1 11110 01134 68
Q ss_pred cceeeeccccccCCCC--------cCHHHHHHHHhhcccCCcEEEEEe
Q 006633 541 YDLIHADSIFSLYKDR--------CEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 541 ~Dl~H~~~lfs~~~~~--------c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
||+|-++..+....+. ...+.+|-++-|+|||||.+++.+
T Consensus 98 fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 98 ADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 9999987644321111 111478899999999999999984
No 459
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.71 E-value=1.1e-05 Score=84.08 Aligned_cols=95 Identities=16% Similarity=-0.005 Sum_probs=63.3
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc--cchhh-ccccccCCCCCccceeeeccc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTYPRTYDLIHADSI 549 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~-~wce~~~~yp~t~Dl~H~~~l 549 (637)
...+|||+|||.|.++..|++..--.-+|+.+|.++.++..+.++ |+ +-+.+ |..+ ...-+..||+|.+++.
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~-~~~~~~~fD~Iv~~~~ 153 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY-GVPEFSPYDVIFVTVG 153 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG-CCGGGCCEEEEEECSB
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhh-ccccCCCeEEEEEcCC
Confidence 356899999999999999876411001345556666788877766 55 22222 2211 1111378999999887
Q ss_pred cccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006633 550 FSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 581 (637)
Q Consensus 550 fs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 581 (637)
+.... -++.|+|||||.+++...
T Consensus 154 ~~~~~---------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 154 VDEVP---------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp BSCCC---------HHHHHHEEEEEEEEEEBC
T ss_pred HHHHH---------HHHHHhcCCCcEEEEEEC
Confidence 76433 477899999999999754
No 460
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.70 E-value=0.0002 Score=68.81 Aligned_cols=117 Identities=13% Similarity=0.085 Sum_probs=81.3
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc-cchhhccccccCCCCCccceeeeccccc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-IGTYQNWCEAMSTYPRTYDLIHADSIFS 551 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-~~~~~~wce~~~~yp~t~Dl~H~~~lfs 551 (637)
...+|||+|||.|.++.+|++.+. -+|+.+|.++.++..+.++ |+ +.++ +..+..+|.+||+|-++.-|.
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~---~~d~~~~~~~~D~v~~~~p~~ 123 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGA--KEVICVEVDKEAVDVLIENLGEFKGKFKVF---IGDVSEFNSRVDIVIMNPPFG 123 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHTGGGTTSEEEE---ESCGGGCCCCCSEEEECCCCS
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHHHHHcCCCEEEE---ECchHHcCCCCCEEEEcCCCc
Confidence 356899999999999999987753 2566677776788777765 32 2222 233444678999999988776
Q ss_pred cCCCCcCHHHHHHHHhhcccCCcEEEEE-eCHHHHHHHHHHHhcCCceeEE
Q 006633 552 LYKDRCEMEDVLLEMDRILRPEGSVIIR-DDVDILVKIKSITDGMEWEGRI 601 (637)
Q Consensus 552 ~~~~~c~~~~~l~e~dRiLrPgG~~i~~-d~~~~~~~~~~~~~~~~W~~~~ 601 (637)
..... ....+|-++-|+| ||.+++. ........+.+++....|++..
T Consensus 124 ~~~~~-~~~~~l~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 171 (207)
T 1wy7_A 124 SQRKH-ADRPFLLKAFEIS--DVVYSIHLAKPEVRRFIEKFSWEHGFVVTH 171 (207)
T ss_dssp SSSTT-TTHHHHHHHHHHC--SEEEEEEECCHHHHHHHHHHHHHTTEEEEE
T ss_pred cccCC-chHHHHHHHHHhc--CcEEEEEeCCcCCHHHHHHHHHHCCCeEEE
Confidence 55433 3356788888998 5555444 2666777788888877777664
No 461
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.69 E-value=4.7e-05 Score=76.88 Aligned_cols=108 Identities=17% Similarity=0.190 Sum_probs=71.7
Q ss_pred ceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhh-----c-c---cchhh-ccccccCCC-CCcccee
Q 006633 478 YRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYER-----G-L---IGTYQ-NWCEAMSTY-PRTYDLI 544 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eR-----g-l---~~~~~-~wce~~~~y-p~t~Dl~ 544 (637)
..+|||+|||.|.++.+|++. +- .+|+.+|.++..+..+.++ | + +-+.+ |..+. .+ +.+||+|
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~--~~~~~~~D~v 175 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAVGPA--GQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADS--ELPDGSVDRA 175 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTT--SEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGC--CCCTTCEEEE
T ss_pred CCEEEEEcccccHHHHHHHHHhCCC--CEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhc--CCCCCceeEE
Confidence 568999999999999999764 21 2456667766788877765 4 2 22222 33322 24 3789998
Q ss_pred eeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC-HHHHHHHHHHHhc-CCc
Q 006633 545 HADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD-VDILVKIKSITDG-MEW 597 (637)
Q Consensus 545 H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~-~~~~~~~~~~~~~-~~W 597 (637)
-++ --+...+|-++-|+|+|||.+++... .+.+.++.+.++. ..|
T Consensus 176 ~~~--------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~l~~~~~f 222 (280)
T 1i9g_A 176 VLD--------MLAPWEVLDAVSRLLVAGGVLMVYVATVTQLSRIVEALRAKQCW 222 (280)
T ss_dssp EEE--------SSCGGGGHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHHSSB
T ss_pred EEC--------CcCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhcCCc
Confidence 772 22455889999999999999999754 3445455444443 444
No 462
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.69 E-value=1.6e-05 Score=84.46 Aligned_cols=97 Identities=14% Similarity=0.209 Sum_probs=63.9
Q ss_pred CCceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhhcccchhhccccccCCCCCccceeeeccccccC
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMSTYPRTYDLIHADSIFSLY 553 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~~wce~~~~yp~t~Dl~H~~~lfs~~ 553 (637)
....+|||+|||.|.++.+|+++ .+ .++..|. +.++..+.+..-+.... +..+.++|. ||+|.+..++..+
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~---~~~~~D~-~~~~~~a~~~~~v~~~~--~d~~~~~~~-~D~v~~~~~lh~~ 280 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLI---KGINFDL-PQVIENAPPLSGIEHVG--GDMFASVPQ-GDAMILKAVCHNW 280 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTC---EEEEEEC-HHHHTTCCCCTTEEEEE--CCTTTCCCC-EEEEEEESSGGGS
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCC---eEEEeCh-HHHHHhhhhcCCCEEEe--CCcccCCCC-CCEEEEecccccC
Confidence 44689999999999999999764 33 2333343 24554443321122111 122334666 9999998888655
Q ss_pred CCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 554 KDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 554 ~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
.+. ....+|-++-|+|||||.++|.|
T Consensus 281 ~d~-~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 281 SDE-KCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp CHH-HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CHH-HHHHHHHHHHHhcCCCCEEEEEE
Confidence 432 23489999999999999999974
No 463
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.67 E-value=4e-05 Score=81.57 Aligned_cols=97 Identities=14% Similarity=0.190 Sum_probs=64.1
Q ss_pred CCceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhhcccchhhccccccCCCCCccceeeeccccccC
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMSTYPRTYDLIHADSIFSLY 553 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~~wce~~~~yp~t~Dl~H~~~lfs~~ 553 (637)
...+.|||+|||+|.++.+|++. .+- ++-.|.+ .++..+.++.-+.... ...|.++|.. |+|.+..++-.+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~---~~~~D~~-~~~~~a~~~~~v~~~~--~d~~~~~p~~-D~v~~~~vlh~~ 274 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSIN---AINFDLP-HVIQDAPAFSGVEHLG--GDMFDGVPKG-DAIFIKWICHDW 274 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCE---EEEEECH-HHHTTCCCCTTEEEEE--CCTTTCCCCC-SEEEEESCGGGB
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCE---EEEEehH-HHHHhhhhcCCCEEEe--cCCCCCCCCC-CEEEEechhhcC
Confidence 45789999999999999999763 332 2333332 4444443332222221 1233456765 999988877655
Q ss_pred CCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 554 KDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 554 ~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
.+. +...+|-++-|+|||||.++|.|
T Consensus 275 ~~~-~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 275 SDE-HCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp CHH-HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CHH-HHHHHHHHHHHHcCCCCEEEEEE
Confidence 432 34589999999999999999975
No 464
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.67 E-value=4.1e-05 Score=76.32 Aligned_cols=95 Identities=11% Similarity=0.121 Sum_probs=63.2
Q ss_pred ceeEeeecccchhhhhhhcCC-C-eEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCC------CCcc
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-P-LWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTY------PRTY 541 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~-v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~y------p~t~ 541 (637)
.++|||+|||.|..+.+|++. + - -.|+.+|.++..+.++.++ |+ |-+++ |..+.+..+ +.+|
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~--~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~f 148 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDD--GKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSY 148 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCC--CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCc
Confidence 568999999999999888653 1 1 2344556665677766543 55 22222 333322333 4789
Q ss_pred ceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 542 DLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 542 Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
|+|.+++- .-....++-++-|+|||||.+++.+
T Consensus 149 D~I~~d~~------~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 149 DFGFVDAD------KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CEEEECCc------hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 99987532 2245788999999999999999864
No 465
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.67 E-value=0.00011 Score=75.61 Aligned_cols=142 Identities=15% Similarity=0.123 Sum_probs=82.7
Q ss_pred CceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhhc------c----cchhh-ccccccCCCCCcccee
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYERG------L----IGTYQ-NWCEAMSTYPRTYDLI 544 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eRg------l----~~~~~-~wce~~~~yp~t~Dl~ 544 (637)
..++|||+|||.|+++..+++. ++ .+|+-+|..+..+.++.++= + +-+++ |..+.....+.+||+|
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSV--ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI 155 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence 3579999999999999999876 34 45566666667777776641 1 11111 1111112236889999
Q ss_pred eeccccccCCCCcCH-HHHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCceeEEeccCCCCC--CcceEEE
Q 006633 545 HADSIFSLYKDRCEM-EDVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIADHENGPR--QREKILF 616 (637)
Q Consensus 545 H~~~lfs~~~~~c~~-~~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~e~~~~--~~~~~l~ 616 (637)
-++.........-.. ..++-++-|+|+|||.+++.. ..+.+..+.+.++..--.+..+...--.. +.-.+++
T Consensus 156 i~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~y~~g~~g~~~ 235 (283)
T 2i7c_A 156 IVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILC 235 (283)
T ss_dssp EEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECCCTTTCHHHHHHHHHHHHTTCSEEEEEEEECTTSGGGEEEEEE
T ss_pred EEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECCCcccCHHHHHHHHHHHHHHCCceEEEEEEcCCcCCCcEEEEE
Confidence 986432221111111 688999999999999999973 22344444444444323333322111111 1235777
Q ss_pred EEec
Q 006633 617 ANKK 620 (637)
Q Consensus 617 ~~K~ 620 (637)
|.|.
T Consensus 236 ~s~~ 239 (283)
T 2i7c_A 236 CSKT 239 (283)
T ss_dssp EESS
T ss_pred EeCC
Confidence 8776
No 466
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.67 E-value=3.8e-05 Score=81.92 Aligned_cols=103 Identities=17% Similarity=0.206 Sum_probs=67.5
Q ss_pred CCEEEEECCCCchHHHHHhhc--------------------CCEEEEcCccccHHHHHHHHHH-cCCCeEEEEe---ccc
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--------------------NILAVSFAPRDTHEAQVQFALE-RGVPALIGVM---ASI 274 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--------------------~v~~vdisp~Dls~a~i~~A~e-rg~~~~~~~~---d~~ 274 (637)
.-+|+|+||++|..+..+.+. .+...|+..+|.+........- ...+..|..+ ...
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 457999999999766554332 2344567667776443322110 0002233333 234
Q ss_pred cCCCCCCCeeEEEeccccccCCcC--------------------------------CHHHHHHHHHhcccCCeEEEEEeC
Q 006633 275 RLPYPSRAFDMAHCSRCLIPWGQY--------------------------------ADGLYLIEVDRVLRPGGYWILSGP 322 (637)
Q Consensus 275 ~Lpfpd~sFDlV~~s~~L~h~~~~--------------------------------d~~~~L~ei~RvLKPGG~Lvls~p 322 (637)
...||+++||+|+|+.+| ||... |...+|+...+.|+|||.++++..
T Consensus 132 ~rlfp~~S~d~v~Ss~aL-HWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYSL-MWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp SCCSCTTCBSCEEEESCT-TBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred hccCCCCceEEEEehhhh-hhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 467999999999999999 88652 122358888999999999999864
No 467
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.66 E-value=0.00019 Score=72.64 Aligned_cols=84 Identities=12% Similarity=0.130 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC-CEEEEcCccccHHHHHHHHHHc-CCCeEEEEeccccCCCC
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN-ILAVSFAPRDTHEAQVQFALER-GVPALIGVMASIRLPYP 279 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~-v~~vdisp~Dls~a~i~~A~er-g~~~~~~~~d~~~Lpfp 279 (637)
...++.+.+.+....+. +|||||||+|.++..|++++ ..++.+ |++..+++.+.++ ..++.+..+|+..++++
T Consensus 17 ~~i~~~iv~~~~~~~~~--~VLDiG~G~G~lt~~L~~~~~~~v~av---Eid~~~~~~~~~~~~~~v~~i~~D~~~~~~~ 91 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGN--TVVEVGGGTGNLTKVLLQHPLKKLYVI---ELDREMVENLKSIGDERLEVINEDASKFPFC 91 (249)
T ss_dssp HHHHHHHHHHTTCCTTC--EEEEEESCHHHHHHHHTTSCCSEEEEE---CCCHHHHHHHTTSCCTTEEEECSCTTTCCGG
T ss_pred HHHHHHHHHhcCCCCcC--EEEEEcCchHHHHHHHHHcCCCeEEEE---ECCHHHHHHHHhccCCCeEEEEcchhhCChh
Confidence 44667777777655544 99999999999999999984 555555 6667777777665 23578888999888876
Q ss_pred CCC-eeEEEecc
Q 006633 280 SRA-FDMAHCSR 290 (637)
Q Consensus 280 d~s-FDlV~~s~ 290 (637)
+.. ...|+++.
T Consensus 92 ~~~~~~~vv~Nl 103 (249)
T 3ftd_A 92 SLGKELKVVGNL 103 (249)
T ss_dssp GSCSSEEEEEEC
T ss_pred HccCCcEEEEEC
Confidence 421 22566654
No 468
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.65 E-value=5e-05 Score=78.26 Aligned_cols=82 Identities=16% Similarity=0.156 Sum_probs=56.9
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc--C----CEEEEcCccccHHHHHHHHHHc-CCCeEEEEeccc
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR--N----ILAVSFAPRDTHEAQVQFALER-GVPALIGVMASI 274 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~--~----v~~vdisp~Dls~a~i~~A~er-g~~~~~~~~d~~ 274 (637)
...++.+.+.+...++. +|||||||+|.++..|+++ . ++++|+++ .+++.++++ ..++.+..+|+.
T Consensus 28 ~~i~~~iv~~~~~~~~~--~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~-----~~l~~a~~~~~~~v~~i~~D~~ 100 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERGE--RMVEIGPGLGALTGPVIARLATPGSPLHAVELDR-----DLIGRLEQRFGELLELHAGDAL 100 (279)
T ss_dssp HHHHHHHHHHHCCCTTC--EEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCH-----HHHHHHHHHHGGGEEEEESCGG
T ss_pred HHHHHHHHHhcCCCCcC--EEEEEccccHHHHHHHHHhCCCcCCeEEEEECCH-----HHHHHHHHhcCCCcEEEECChh
Confidence 34566777777665544 9999999999999999986 3 66776654 444444443 346788999998
Q ss_pred cCCCCCC------CeeEEEecc
Q 006633 275 RLPYPSR------AFDMAHCSR 290 (637)
Q Consensus 275 ~Lpfpd~------sFDlV~~s~ 290 (637)
.+++++- ..+.|+++.
T Consensus 101 ~~~~~~~~~~~~~~~~~vv~Nl 122 (279)
T 3uzu_A 101 TFDFGSIARPGDEPSLRIIGNL 122 (279)
T ss_dssp GCCGGGGSCSSSSCCEEEEEEC
T ss_pred cCChhHhcccccCCceEEEEcc
Confidence 8887532 234566654
No 469
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.65 E-value=1.3e-05 Score=79.27 Aligned_cols=92 Identities=16% Similarity=0.153 Sum_probs=61.0
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc--cchhhccccccCCCC-C-ccceeeecc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQNWCEAMSTYP-R-TYDLIHADS 548 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~~wce~~~~yp-~-t~Dl~H~~~ 548 (637)
...+|||+|||.|.+++.|++..- .+|+.+|.++..+..+.++ |+ +.+.. +.....+| . .||+|.++.
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~--~d~~~~~~~~~~fD~Ii~~~ 166 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVIL--GDGSKGFPPKAPYDVIIVTA 166 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEE--SCGGGCCGGGCCEEEEEECS
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEE--CCcccCCCCCCCccEEEECC
Confidence 356899999999999999976420 2445556555677777664 33 22221 12234455 3 499999876
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006633 549 IFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 581 (637)
Q Consensus 549 lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 581 (637)
.+... .-++-|+|||||.+++.-.
T Consensus 167 ~~~~~---------~~~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 167 GAPKI---------PEPLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp BBSSC---------CHHHHHTEEEEEEEEEEEC
T ss_pred cHHHH---------HHHHHHhcCCCcEEEEEEe
Confidence 65432 2378899999999999754
No 470
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.64 E-value=2.8e-05 Score=84.38 Aligned_cols=97 Identities=10% Similarity=0.056 Sum_probs=64.8
Q ss_pred CCceeEeeecccchhhhhhhcC-CCeEEEEeccCCCCcchhHHHHh-----------hcc----cchhhccccccCCCC-
Q 006633 476 GRYRNLLDMNAYLGGFAAALVD-DPLWVMNTVPVEAKINTLGVIYE-----------RGL----IGTYQNWCEAMSTYP- 538 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~-~~v~~mnv~~~~~~~~~l~~~~e-----------Rgl----~~~~~~wce~~~~yp- 538 (637)
....+|||+|||+|.++..|+. .+. -.|+.+|.++.++.++.+ .|+ |-+++ ..+...|
T Consensus 172 ~~gd~VLDLGCGtG~l~l~lA~~~g~--~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~---GD~~~lp~ 246 (438)
T 3uwp_A 172 TDDDLFVDLGSGVGQVVLQVAAATNC--KHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER---GDFLSEEW 246 (438)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHCCC--SEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE---CCTTSHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE---CcccCCcc
Confidence 3467899999999999987764 333 135666776667766654 243 22332 3333333
Q ss_pred ----CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006633 539 ----RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 581 (637)
Q Consensus 539 ----~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 581 (637)
..||+|-++.++ + .-++...|.|+.|+|||||.||+.+.
T Consensus 247 ~d~~~~aDVVf~Nn~~--F--~pdl~~aL~Ei~RvLKPGGrIVssE~ 289 (438)
T 3uwp_A 247 RERIANTSVIFVNNFA--F--GPEVDHQLKERFANMKEGGRIVSSKP 289 (438)
T ss_dssp HHHHHTCSEEEECCTT--C--CHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred ccccCCccEEEEcccc--c--CchHHHHHHHHHHcCCCCcEEEEeec
Confidence 368888775542 1 13567888999999999999999854
No 471
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=97.63 E-value=2e-05 Score=87.34 Aligned_cols=96 Identities=18% Similarity=0.178 Sum_probs=65.7
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhh-ccccccCCCCCccceeeecc
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCEAMSTYPRTYDLIHADS 548 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce~~~~yp~t~Dl~H~~~ 548 (637)
...+|||+|||.|.++..|++.+. ..|+.+|.++ ++..+.++ |+ +.+++ |+-+ + .+|..||+|-++.
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~--~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~-~-~~~~~fD~Ivs~~ 232 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGA--RKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEE-V-SLPEQVDIIISEP 232 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTC--SEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTT-C-CCSSCEEEEECCC
T ss_pred CCCEEEEecCcccHHHHHHHHcCC--CEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhh-C-ccCCCeEEEEEeC
Confidence 357999999999999999887754 3556666664 66555443 55 33333 2222 1 3568899999977
Q ss_pred ccccCCCCcCHHHHHHHHhhcccCCcEEEE
Q 006633 549 IFSLYKDRCEMEDVLLEMDRILRPEGSVII 578 (637)
Q Consensus 549 lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~ 578 (637)
++..... -.+...|.++.|+|+|||.+++
T Consensus 233 ~~~~~~~-e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 233 MGYMLFN-ERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp CHHHHTC-HHHHHHHHHGGGGEEEEEEEES
T ss_pred chHhcCc-HHHHHHHHHHHHhcCCCCEEEE
Confidence 6543322 2355677899999999999986
No 472
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.63 E-value=4.2e-05 Score=78.25 Aligned_cols=96 Identities=8% Similarity=0.121 Sum_probs=66.1
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCC-CcchhHHHHhhc---------c-------cchh-hccccccCCC--
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEA-KINTLGVIYERG---------L-------IGTY-QNWCEAMSTY-- 537 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~-~~~~l~~~~eRg---------l-------~~~~-~~wce~~~~y-- 537 (637)
..+|||+|||+|.++.+|+..+. -.|+.+|. ++.++..+.++- + +-+. .+|.+.....
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~~~--~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLAGA--DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTC--SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred CCeEEEecccccHHHHHHHHcCC--CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 46899999999999998887653 25666777 567777765542 1 2222 3576543332
Q ss_pred ---CCccceeeeccccccCCCCcCHHHHHHHHhhccc---C--CcEEEE
Q 006633 538 ---PRTYDLIHADSIFSLYKDRCEMEDVLLEMDRILR---P--EGSVII 578 (637)
Q Consensus 538 ---p~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLr---P--gG~~i~ 578 (637)
+..||+|-+..++-. .-+.+.+|-++.|+|+ | ||.+++
T Consensus 158 ~~~~~~fD~Ii~~dvl~~---~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSF---HQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HHSCSSBSEEEEESCCSC---GGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred hccCCCCCEEEEeCcccC---hHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 478999977444322 2356889999999999 9 997655
No 473
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=97.61 E-value=5.6e-05 Score=81.20 Aligned_cols=121 Identities=16% Similarity=0.183 Sum_probs=75.6
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc-c---chhh-ccccccCCC---CCccceee
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL-I---GTYQ-NWCEAMSTY---PRTYDLIH 545 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl-~---~~~~-~wce~~~~y---p~t~Dl~H 545 (637)
..+|||+|||+|+|+.++++.+. -.|+.+|.++..+..+.+. |+ - -+++ |.-+.+... ...||+|.
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~--~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGC--SQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEeeccCCHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 46899999999999999988752 3566667776677666553 44 2 1221 111111111 35899999
Q ss_pred ecccccc------CCCCcCHHHHHHHHhhcccCCcEEEEEeCH------HHHHHHHHHHhcCCceeE
Q 006633 546 ADSIFSL------YKDRCEMEDVLLEMDRILRPEGSVIIRDDV------DILVKIKSITDGMEWEGR 600 (637)
Q Consensus 546 ~~~lfs~------~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~------~~~~~~~~~~~~~~W~~~ 600 (637)
++--+.. .........++.++-++|+|||.++++... +....+++.+.....+..
T Consensus 299 ~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~ 365 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSGLMTSDLFQKIIADAAIDAGRDVQ 365 (396)
T ss_dssp ECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCEE
T ss_pred ECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCeEE
Confidence 8643311 112245678999999999999999997432 234555555555444443
No 474
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.61 E-value=0.00012 Score=70.22 Aligned_cols=111 Identities=8% Similarity=-0.061 Sum_probs=71.0
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhhcc-cchhhccccccCCCCCccceeeeccccccCCC
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYERGL-IGTYQNWCEAMSTYPRTYDLIHADSIFSLYKD 555 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eRgl-~~~~~~wce~~~~yp~t~Dl~H~~~lfs~~~~ 555 (637)
...+|||+|||.|.++.+|++.+. -.|+.+|.++.++..+.++-- +-+++ ..+..+|.+||+|-++..|....+
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~---~d~~~~~~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGA--ESVTAFDIDPDAIETAKRNCGGVNFMV---ADVSEISGKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTB--SEEEEEESCHHHHHHHHHHCTTSEEEE---CCGGGCCCCEEEEEECCCC-----
T ss_pred CCCEEEEEeCCccHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhcCCCEEEE---CcHHHCCCCeeEEEECCCchhccC
Confidence 356899999999999999987753 346667777778888877631 12222 233335789999999888876544
Q ss_pred CcCHHHHHHHHhhcccCCcEEEEEeCHHHHHHHHHHHhcCC
Q 006633 556 RCEMEDVLLEMDRILRPEGSVIIRDDVDILVKIKSITDGME 596 (637)
Q Consensus 556 ~c~~~~~l~e~dRiLrPgG~~i~~d~~~~~~~~~~~~~~~~ 596 (637)
. ....++-++-|+| |+.+++. +......+.+++....
T Consensus 126 ~-~~~~~l~~~~~~~--g~~~~~~-~~~~~~~~~~~~~~~g 162 (200)
T 1ne2_A 126 H-SDRAFIDKAFETS--MWIYSIG-NAKARDFLRREFSARG 162 (200)
T ss_dssp ---CHHHHHHHHHHE--EEEEEEE-EGGGHHHHHHHHHHHE
T ss_pred c-hhHHHHHHHHHhc--CcEEEEE-cCchHHHHHHHHHHCC
Confidence 2 2246788888888 5544444 4445566666655544
No 475
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.60 E-value=3.9e-05 Score=78.25 Aligned_cols=113 Identities=13% Similarity=0.097 Sum_probs=72.0
Q ss_pred ceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh----cc--cchhhccccccCCCCCccceeeecccc
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER----GL--IGTYQNWCEAMSTYPRTYDLIHADSIF 550 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~~wce~~~~yp~t~Dl~H~~~lf 550 (637)
..+|||+|||+|+|+..|++. + ...|+.+|.++..+..+.+. |+ +-+++.=.+.+ ..+..||+|-++...
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~--~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSK--PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-ELKDVADRVIMGYVH 196 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTC--CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CCTTCEEEEEECCCS
T ss_pred CCEEEEecCcCCHHHHHHHHhCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-CccCCceEEEECCcc
Confidence 578999999999999998765 2 12345556655666666542 33 12222111222 225789999875443
Q ss_pred ccCCCCcCHHHHHHHHhhcccCCcEEEEEeCH------HHH-HHHHHHHhcCCceeE
Q 006633 551 SLYKDRCEMEDVLLEMDRILRPEGSVIIRDDV------DIL-VKIKSITDGMEWEGR 600 (637)
Q Consensus 551 s~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~~------~~~-~~~~~~~~~~~W~~~ 600 (637)
....++.++-|+|+|||.+++++.. +.. +.++.+.+.+.+++.
T Consensus 197 -------~~~~~l~~~~~~LkpgG~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (272)
T 3a27_A 197 -------KTHKFLDKTFEFLKDRGVIHYHETVAEKIMYERPIERLKFYAEKNGYKLI 246 (272)
T ss_dssp -------SGGGGHHHHHHHEEEEEEEEEEEEEEGGGTTTHHHHHHHHHHHHTTEEEE
T ss_pred -------cHHHHHHHHHHHcCCCCEEEEEEcCccccccccHHHHHHHHHHHhCCeeE
Confidence 5577899999999999999998542 233 334445555555554
No 476
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.59 E-value=0.00021 Score=81.40 Aligned_cols=97 Identities=11% Similarity=-0.003 Sum_probs=61.9
Q ss_pred CCEEEEECCCCchH---HHHHhhc-----CCEEEEcCccccHHHHHHHHHHcC--CCeEEEEeccccCCCCCCCeeEEEe
Q 006633 219 IRTAIDTGCGVASW---GAYLMSR-----NILAVSFAPRDTHEAQVQFALERG--VPALIGVMASIRLPYPSRAFDMAHC 288 (637)
Q Consensus 219 ~r~VLDIGCGtG~~---a~~La~~-----~v~~vdisp~Dls~a~i~~A~erg--~~~~~~~~d~~~Lpfpd~sFDlV~~ 288 (637)
...|||||||+|.+ +...+++ .|.+++-++ ......+...+++ ..+.+..++.+.+..| ..+|+|++
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp--~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVS 434 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP--NAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVS 434 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH--HHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEEC
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH--HHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEE
Confidence 45799999999977 3333333 245565544 2222333333343 3478888888888766 57999999
Q ss_pred ccccccCCcCCHHHHHHHHHhcccCCeEEE
Q 006633 289 SRCLIPWGQYADGLYLIEVDRVLRPGGYWI 318 (637)
Q Consensus 289 s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lv 318 (637)
-..-.-+..|-...++....|.|||||.++
T Consensus 435 EwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 435 ELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 443322222234467888899999999874
No 477
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.57 E-value=0.00012 Score=77.25 Aligned_cols=140 Identities=19% Similarity=0.096 Sum_probs=81.5
Q ss_pred CCceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc--cchhhccccccCCCCCccceeeeccc
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQNWCEAMSTYPRTYDLIHADSI 549 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~~wce~~~~yp~t~Dl~H~~~l 549 (637)
.....|||+|||.|+++..++...--...|+.+|.++.++..+.++ |+ |-+.+.=.+.+......||+|-++--
T Consensus 202 ~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npP 281 (354)
T 3tma_A 202 RPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPP 281 (354)
T ss_dssp CTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCC
T ss_pred CCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCC
Confidence 4467999999999999877655210001345556666777777654 44 22232111222222367899999766
Q ss_pred cccCC-CCcC----HHHHHHHHhhcccCCcEEEEEeCHHHHHHHHHHHhcCCceeEEe-ccCCCCCCcceEEEEEe
Q 006633 550 FSLYK-DRCE----MEDVLLEMDRILRPEGSVIIRDDVDILVKIKSITDGMEWEGRIA-DHENGPRQREKILFANK 619 (637)
Q Consensus 550 fs~~~-~~c~----~~~~l~e~dRiLrPgG~~i~~d~~~~~~~~~~~~~~~~W~~~~~-~~e~~~~~~~~~l~~~K 619 (637)
|..-. ..-. ...++-++-|+|||||.+++......+ ++++.+ ..|+.... ...+|.+ .-.|++++|
T Consensus 282 yg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~~~--~~~~~~-~g~~~~~~~~l~~g~l-~~~i~vl~r 353 (354)
T 3tma_A 282 HGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLRPAL--LKRALP-PGFALRHARVVEQGGV-YPRVFVLEK 353 (354)
T ss_dssp SCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCHHH--HHHHCC-TTEEEEEEEECCBTTB-CCEEEEEEE
T ss_pred CcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCHHH--HHHHhh-cCcEEEEEEEEEeCCE-EEEEEEEEc
Confidence 54211 1111 257888999999999999986544322 445555 67766422 2234443 345666665
No 478
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=97.57 E-value=6e-05 Score=80.92 Aligned_cols=99 Identities=15% Similarity=0.164 Sum_probs=63.5
Q ss_pred ceeEeeecccchhhhhhhcC---CCeEEEEeccCCCCcchhHHHHhhcc---cchhhccccccCCCCCccceeeeccccc
Q 006633 478 YRNLLDMNAYLGGFAAALVD---DPLWVMNTVPVEAKINTLGVIYERGL---IGTYQNWCEAMSTYPRTYDLIHADSIFS 551 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~---~~v~~mnv~~~~~~~~~l~~~~eRgl---~~~~~~wce~~~~yp~t~Dl~H~~~lfs 551 (637)
..+|||+|||+|.++-..++ +.|+.+-..+. -.....++.+.|+ |-+++.--+.+ ..|..||+|=+.-+-+
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~--~~~a~~~~~~n~~~~~i~~i~~~~~~~-~lpe~~DvivsE~~~~ 160 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGARRVYAVEASAI--WQQAREVVRFNGLEDRVHVLPGPVETV-ELPEQVDAIVSEWMGY 160 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTT--HHHHHHHHHHTTCTTTEEEEESCTTTC-CCSSCEEEEECCCCBT
T ss_pred CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHH--HHHHHHHHHHcCCCceEEEEeeeeeee-cCCccccEEEeecccc
Confidence 45799999999987544443 44655543331 1123445556677 44444222222 3578899987744434
Q ss_pred cCCCCcCHHHHHHHHhhcccCCcEEEEE
Q 006633 552 LYKDRCEMEDVLLEMDRILRPEGSVIIR 579 (637)
Q Consensus 552 ~~~~~c~~~~~l~e~dRiLrPgG~~i~~ 579 (637)
..-....++.++...||+|+|||.+|-+
T Consensus 161 ~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 161 GLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp TBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred cccccchhhhHHHHHHhhCCCCceECCc
Confidence 4444457889999999999999998863
No 479
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.57 E-value=2.2e-05 Score=82.71 Aligned_cols=95 Identities=14% Similarity=0.227 Sum_probs=64.2
Q ss_pred CceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhhcccchh-hccccccCCCCCccceeeeccccccC
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYERGLIGTY-QNWCEAMSTYPRTYDLIHADSIFSLY 553 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eRgl~~~~-~~wce~~~~yp~t~Dl~H~~~lfs~~ 553 (637)
...+|||+|||.|.++.+|+++ ++ .++..|. +.++..+.+..-+... +|. +.++|. ||+|.+..++..+
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~---~~~~~D~-~~~~~~a~~~~~v~~~~~d~---~~~~p~-~D~v~~~~~lh~~ 259 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKL---KCIVFDR-PQVVENLSGSNNLTYVGGDM---FTSIPN-ADAVLLKYILHNW 259 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTC---EEEEEEC-HHHHTTCCCBTTEEEEECCT---TTCCCC-CSEEEEESCGGGS
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCC---eEEEeeC-HHHHhhcccCCCcEEEeccc---cCCCCC-ccEEEeehhhccC
Confidence 3679999999999999999864 22 2334444 3555544332112221 222 345665 9999998888766
Q ss_pred CCCcCHHHHHHHHhhcccC---CcEEEEEe
Q 006633 554 KDRCEMEDVLLEMDRILRP---EGSVIIRD 580 (637)
Q Consensus 554 ~~~c~~~~~l~e~dRiLrP---gG~~i~~d 580 (637)
.+. ....+|-++-|+||| ||.++|.|
T Consensus 260 ~d~-~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 260 TDK-DCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp CHH-HHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred CHH-HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 432 234899999999999 99999975
No 480
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.56 E-value=0.00019 Score=80.55 Aligned_cols=115 Identities=14% Similarity=0.086 Sum_probs=73.0
Q ss_pred HHHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc-----------------CCEEEEcCccccHHHHHHHHHH---
Q 006633 202 DAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-----------------NILAVSFAPRDTHEAQVQFALE--- 261 (637)
Q Consensus 202 ~~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-----------------~v~~vdisp~Dls~a~i~~A~e--- 261 (637)
...++.+.+++.... .+|||.+||+|.|...+++. .....++ |+...+.+.|+.
T Consensus 231 ~~Vv~lmv~ll~p~~---~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~---Eid~~~~~lA~~Nl~ 304 (544)
T 3khk_A 231 KSIVTLIVEMLEPYK---GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQ---ESNPTTWKLAAMNMV 304 (544)
T ss_dssp HHHHHHHHHHHCCCS---EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEEC---CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC---CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEE---eCCHHHHHHHHHHHH
Confidence 456677777775433 28999999999988776431 2233333 444444444442
Q ss_pred -cCCCeEE--EEeccccCC-CCCCCeeEEEecccccc--CCcC-------------------------CHHHHHHHHHhc
Q 006633 262 -RGVPALI--GVMASIRLP-YPSRAFDMAHCSRCLIP--WGQY-------------------------ADGLYLIEVDRV 310 (637)
Q Consensus 262 -rg~~~~~--~~~d~~~Lp-fpd~sFDlV~~s~~L~h--~~~~-------------------------d~~~~L~ei~Rv 310 (637)
.++...+ ..+|+...+ +++..||+|+++.-+.. |..+ ..-.++..+.+.
T Consensus 305 l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~ 384 (544)
T 3khk_A 305 IRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYH 384 (544)
T ss_dssp HTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHT
T ss_pred HhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHH
Confidence 3443333 555654444 45688999999865532 2110 112689999999
Q ss_pred ccCCeEEEEEeC
Q 006633 311 LRPGGYWILSGP 322 (637)
Q Consensus 311 LKPGG~Lvls~p 322 (637)
|||||++++..|
T Consensus 385 Lk~gGr~aiVlP 396 (544)
T 3khk_A 385 LAPTGSMALLLA 396 (544)
T ss_dssp EEEEEEEEEEEE
T ss_pred hccCceEEEEec
Confidence 999999999976
No 481
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.55 E-value=9.1e-05 Score=77.07 Aligned_cols=142 Identities=16% Similarity=0.164 Sum_probs=79.4
Q ss_pred CceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh------cc----cchhh-ccccccCCCCCcccee
Q 006633 477 RYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER------GL----IGTYQ-NWCEAMSTYPRTYDLI 544 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR------gl----~~~~~-~wce~~~~yp~t~Dl~ 544 (637)
..++|||+|||.|+++..|++. ++ .+|+-+|..+.++.++.++ |+ +-+++ |-.+.+...+.+||+|
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I 172 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSV--ESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI 172 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTC--CEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHcCCC--CEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence 3579999999999999999887 34 3455556666677777654 32 12221 1111122235899999
Q ss_pred eeccccccCCCC-cCHHHHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCceeEEec--cCCCCCCcceEEE
Q 006633 545 HADSIFSLYKDR-CEMEDVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIAD--HENGPRQREKILF 616 (637)
Q Consensus 545 H~~~lfs~~~~~-c~~~~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~--~e~~~~~~~~~l~ 616 (637)
-++......... -....++-++-|+|||||.+++.. ..+....+.+..+.+-=.+...- .-.-+.+...+++
T Consensus 173 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~l~~~f~~v~~~~~~vP~~~~g~~g~~~ 252 (304)
T 2o07_A 173 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLHLDLIKEMRQFCQSLFPVVAYAYCTIPTYPSGQIGFML 252 (304)
T ss_dssp EEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTCHHHHHHHHHHHHHHCSEEEEEEEECTTSGGGEEEEEE
T ss_pred EECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccchHHHHHHHHHHHHhCCCceeEEEEeccccCcceEEEE
Confidence 985432211110 012468899999999999999964 12334444443333322222211 0111112346788
Q ss_pred EEec
Q 006633 617 ANKK 620 (637)
Q Consensus 617 ~~K~ 620 (637)
|.|.
T Consensus 253 as~~ 256 (304)
T 2o07_A 253 CSKN 256 (304)
T ss_dssp EESS
T ss_pred EeCC
Confidence 8886
No 482
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.54 E-value=7.5e-05 Score=77.93 Aligned_cols=141 Identities=11% Similarity=0.031 Sum_probs=83.2
Q ss_pred ceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHHHhh------c-c----cchhh-ccccccCCCCCcccee
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVIYER------G-L----IGTYQ-NWCEAMSTYPRTYDLI 544 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~~eR------g-l----~~~~~-~wce~~~~yp~t~Dl~ 544 (637)
.++|||+|||.|+++.+|++. ++ .+|+-+|..+..+..+.++ | + +-+++ |..+-+...+.+||+|
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~--~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTV--EKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTC--CEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCC--CEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 579999999999999999887 34 3555666666677777653 2 1 11111 1111112235889999
Q ss_pred eecccccc---CC-CCcCHHHHHHHHhhcccCCcEEEEEe------CHHHHHHHHHHHhcCCceeEEecc--CCCCCCcc
Q 006633 545 HADSIFSL---YK-DRCEMEDVLLEMDRILRPEGSVIIRD------DVDILVKIKSITDGMEWEGRIADH--ENGPRQRE 612 (637)
Q Consensus 545 H~~~lfs~---~~-~~c~~~~~l~e~dRiLrPgG~~i~~d------~~~~~~~~~~~~~~~~W~~~~~~~--e~~~~~~~ 612 (637)
-++..... .. ..-....++-++-|+|+|||.+++.- ..+....+.+.++..--.+..... ... .+..
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~~~~l~~~F~~v~~~~~~vP~~-~g~~ 234 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMILLTHHRVHPVVHRTVREAFRYVRSYKNHIPGF-FLNF 234 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEECC---CHHHHHHHHHHTTCSEEEEEEEEEGGG-TEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCccccCHHHHHHHHHHHHHHCCceEEEEEecCCC-CCeE
Confidence 98644322 10 00013688999999999999999862 123455555555554333332211 001 1235
Q ss_pred eEEEEEecC
Q 006633 613 KILFANKKY 621 (637)
Q Consensus 613 ~~l~~~K~~ 621 (637)
.+++|.|.+
T Consensus 235 ~~~~as~~~ 243 (314)
T 1uir_A 235 GFLLASDAF 243 (314)
T ss_dssp EEEEEESSS
T ss_pred EEEEEECCC
Confidence 678898874
No 483
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.54 E-value=4.5e-05 Score=83.33 Aligned_cols=100 Identities=7% Similarity=0.096 Sum_probs=63.4
Q ss_pred CCceeEeeecccchhhhhhhcCC-CeEEEEeccCCCCcchhHHH-------Hh----hcc-cchhhcc-ccccCC---C-
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD-PLWVMNTVPVEAKINTLGVI-------YE----RGL-IGTYQNW-CEAMST---Y- 537 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~-~v~~mnv~~~~~~~~~l~~~-------~e----Rgl-~~~~~~w-ce~~~~---y- 537 (637)
....+|||+|||+|.+++.|++. +. ..|+.+|.+..++..+ .+ .|+ ++-+.-- +..+.. +
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~g~--~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~ 318 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALECGC--ALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVA 318 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCC--SEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHCCC--CEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccc
Confidence 34678999999999999999874 32 1344555554555555 33 353 1211111 123321 2
Q ss_pred --CCccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006633 538 --PRTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 581 (637)
Q Consensus 538 --p~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 581 (637)
+..||+|-++..+ + .-+++..|.|+-|+|||||.+++.+.
T Consensus 319 ~~~~~FDvIvvn~~l--~--~~d~~~~L~el~r~LKpGG~lVi~d~ 360 (433)
T 1u2z_A 319 ELIPQCDVILVNNFL--F--DEDLNKKVEKILQTAKVGCKIISLKS 360 (433)
T ss_dssp HHGGGCSEEEECCTT--C--CHHHHHHHHHHHTTCCTTCEEEESSC
T ss_pred cccCCCCEEEEeCcc--c--cccHHHHHHHHHHhCCCCeEEEEeec
Confidence 3689999875433 1 13567888999999999999999863
No 484
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.53 E-value=4e-05 Score=78.77 Aligned_cols=120 Identities=16% Similarity=0.253 Sum_probs=78.0
Q ss_pred chhhHHHHHHHHHHHHHhhhccCCCCCceeEeeecccchh----hhhhhcCC-CeE--EEEeccCCCCcchhHHHHhhcc
Q 006633 451 FREDTALWKKRVTYYKSVDYQLAQPGRYRNLLDMNAYLGG----FAAALVDD-PLW--VMNTVPVEAKINTLGVIYERGL 523 (637)
Q Consensus 451 f~~d~~~w~~~v~~y~~~~~~l~~~~~~r~vlD~~~g~gg----faa~l~~~-~v~--~mnv~~~~~~~~~l~~~~eRgl 523 (637)
|-.|...|.--.+ .+++. . +.-.|+|+|||+|- .|-.|.+. +-. -..|+.+|-++.+|..+.+. +
T Consensus 86 FfRd~~~f~~l~~---~llp~--~--~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~-~ 157 (274)
T 1af7_A 86 FFREAHHFPILAE---HARRR--H--GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSG-I 157 (274)
T ss_dssp TTTTTTHHHHHHH---HHHHS--C--SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHT-E
T ss_pred ccCChHHHHHHHH---HccCC--C--CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhc-C
Confidence 5556566654332 23332 1 23579999999997 55555543 210 02788999998999988753 2
Q ss_pred c-------------------------c--------------hhhccccccCCCC--CccceeeeccccccCCCCcCHHHH
Q 006633 524 I-------------------------G--------------TYQNWCEAMSTYP--RTYDLIHADSIFSLYKDRCEMEDV 562 (637)
Q Consensus 524 ~-------------------------~--------------~~~~wce~~~~yp--~t~Dl~H~~~lfs~~~~~c~~~~~ 562 (637)
. | ..||+.+ .+|| ..||+|-|.+++-... .-....+
T Consensus 158 y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~--~~~~~~~~fDlI~crnvliyf~-~~~~~~v 234 (274)
T 1af7_A 158 YRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLE--KQYNVPGPFDAIFCRNVMIYFD-KTTQEDI 234 (274)
T ss_dssp EEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTC--SSCCCCCCEEEEEECSSGGGSC-HHHHHHH
T ss_pred CchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCC--CCCCcCCCeeEEEECCchHhCC-HHHHHHH
Confidence 1 0 1234444 2344 7899999988875443 2345789
Q ss_pred HHHHhhcccCCcEEEEEeC
Q 006633 563 LLEMDRILRPEGSVIIRDD 581 (637)
Q Consensus 563 l~e~dRiLrPgG~~i~~d~ 581 (637)
+-++-+.|+|||++++...
T Consensus 235 l~~~~~~L~pgG~L~lg~s 253 (274)
T 1af7_A 235 LRRFVPLLKPDGLLFAGHS 253 (274)
T ss_dssp HHHHGGGEEEEEEEEECTT
T ss_pred HHHHHHHhCCCcEEEEEec
Confidence 9999999999999999643
No 485
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.52 E-value=0.0029 Score=67.54 Aligned_cols=119 Identities=12% Similarity=0.042 Sum_probs=76.1
Q ss_pred CCCEEEEECCCCchHHHHHhhcCCEEEEcCccccHHHHHHHHHHcCCCeEEEEeccccCCCCCCCeeEEEeccccccCCc
Q 006633 218 SIRTAIDTGCGVASWGAYLMSRNILAVSFAPRDTHEAQVQFALERGVPALIGVMASIRLPYPSRAFDMAHCSRCLIPWGQ 297 (637)
Q Consensus 218 ~~r~VLDIGCGtG~~a~~La~~~v~~vdisp~Dls~a~i~~A~erg~~~~~~~~d~~~Lpfpd~sFDlV~~s~~L~h~~~ 297 (637)
.+.++||+||+.|.|+..|++++..++.++...++... .....+.+...|...+..+.+.||+|+|-.+.
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~~l-----~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~----- 280 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSL-----MDTGQVTWLREDGFKFRPTRSNISWMVCDMVE----- 280 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCHHH-----HTTTCEEEECSCTTTCCCCSSCEEEEEECCSS-----
T ss_pred CCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcChhh-----ccCCCeEEEeCccccccCCCCCcCEEEEcCCC-----
Confidence 34599999999999999999997655555443333221 22346788888888877777889999996654
Q ss_pred CCHHHHHHHHHhcccCC---eEEEEEeCCCCccccccCCCCchhhhHHhHhhHHHHHHHhce
Q 006633 298 YADGLYLIEVDRVLRPG---GYWILSGPPVNWESHWKGWNRTTEDLKSEQNGIETIARSLCW 356 (637)
Q Consensus 298 ~d~~~~L~ei~RvLKPG---G~Lvls~pp~~w~~~~~~w~~t~e~l~~~~~~ie~la~~l~w 356 (637)
++...+.-+.+.|..| +.++..-.+.. ...+.+......+.......++
T Consensus 281 -~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk---------~~~~~l~~~~~~i~~~l~~~g~ 332 (375)
T 4auk_A 281 -KPAKVAALMAQWLVNGWCRETIFNLKLPMK---------KRYEEVSHNLAYIQAQLDEHGI 332 (375)
T ss_dssp -CHHHHHHHHHHHHHTTSCSEEEEEEECCSS---------SHHHHHHHHHHHHHHHHHHTTC
T ss_pred -ChHHhHHHHHHHHhccccceEEEEEEeccc---------chHHHHHHHHHHHHHHHHhcCc
Confidence 4555666666666555 54443322211 2334455555556666665554
No 486
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=97.51 E-value=0.00016 Score=78.05 Aligned_cols=96 Identities=13% Similarity=0.073 Sum_probs=64.8
Q ss_pred CCEEEEECCCCchHHHHHhhc--C---CEEEEcCccccHHHHHHHHHHcCCC---eEEEEeccccCC--CCCCCeeEEEe
Q 006633 219 IRTAIDTGCGVASWGAYLMSR--N---ILAVSFAPRDTHEAQVQFALERGVP---ALIGVMASIRLP--YPSRAFDMAHC 288 (637)
Q Consensus 219 ~r~VLDIGCGtG~~a~~La~~--~---v~~vdisp~Dls~a~i~~A~erg~~---~~~~~~d~~~Lp--fpd~sFDlV~~ 288 (637)
+.+|||++||+|.++..++.+ + |+++|+++..+.... +.+..+++. +.+...|+..+. ...+.||+|++
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~-~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMK-ENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHH-HHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 348999999999999999884 3 456655443322222 222234543 777777764431 12457999998
Q ss_pred ccccccCCcCCHHHHHHHHHhcccCCeEEEEEe
Q 006633 289 SRCLIPWGQYADGLYLIEVDRVLRPGGYWILSG 321 (637)
Q Consensus 289 s~~L~h~~~~d~~~~L~ei~RvLKPGG~Lvls~ 321 (637)
.. +. ....++..+.+.|+|||.++++.
T Consensus 132 DP----~g--~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 132 DP----FG--TPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp CC----SS--CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC----Cc--CHHHHHHHHHHHhCCCCEEEEEe
Confidence 65 22 34568999999999999998875
No 487
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.51 E-value=0.00014 Score=76.41 Aligned_cols=142 Identities=13% Similarity=0.084 Sum_probs=81.5
Q ss_pred ceeEeeecccchhhhhhhcC-CCeEEEEeccCCCCcchhHHHHhhc-c-----cchhh-ccccccCCCC-Cccceeeecc
Q 006633 478 YRNLLDMNAYLGGFAAALVD-DPLWVMNTVPVEAKINTLGVIYERG-L-----IGTYQ-NWCEAMSTYP-RTYDLIHADS 548 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~-~~v~~mnv~~~~~~~~~l~~~~eRg-l-----~~~~~-~wce~~~~yp-~t~Dl~H~~~ 548 (637)
..+|||+|||.|+++.+|++ .+-. .|+-+|..+.++.++.++= + +-+++ |-.+-...++ ++||+|-++.
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~--~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~ 167 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQS--RNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDV 167 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTC--EEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECC
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCc--EEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECC
Confidence 44999999999999999987 4321 3444555556888777651 1 12222 2222223454 8999998864
Q ss_pred ccccCCC-CcCHHHHHHHHhhcccCCcEEEEEeC--H--HHHHHHHH-HHhcCCceeEEe-ccC--CCCCCcceEEEEEe
Q 006633 549 IFSLYKD-RCEMEDVLLEMDRILRPEGSVIIRDD--V--DILVKIKS-ITDGMEWEGRIA-DHE--NGPRQREKILFANK 619 (637)
Q Consensus 549 lfs~~~~-~c~~~~~l~e~dRiLrPgG~~i~~d~--~--~~~~~~~~-~~~~~~W~~~~~-~~e--~~~~~~~~~l~~~K 619 (637)
....+.. .-.-..++-++-|+|||||.+++.-. . +.+..+.+ +.+.+. .+.++ +.. .|......|++|.|
T Consensus 168 ~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~~~~~~~~~~tL~~vF~-~v~~~~~~~~~~g~~~gN~Vl~As~ 246 (317)
T 3gjy_A 168 FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSDLRGAKSELAGMMEVFE-HVAVIADPPMLKGRRYGNIILMGSD 246 (317)
T ss_dssp STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTTCHHHHHHHHHHHHHCS-EEEEEECHHHHTTSSCEEEEEEEES
T ss_pred CCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHHCC-ceEEEEecCCCCCCcCceEEEEEEC
Confidence 3222211 11126889999999999999998521 1 22222222 233333 23332 211 22223467899988
Q ss_pred cCC
Q 006633 620 KYW 622 (637)
Q Consensus 620 ~~w 622 (637)
.-.
T Consensus 247 ~pl 249 (317)
T 3gjy_A 247 TEF 249 (317)
T ss_dssp SCC
T ss_pred CCC
Confidence 654
No 488
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.50 E-value=4.9e-05 Score=74.35 Aligned_cols=93 Identities=13% Similarity=0.080 Sum_probs=61.0
Q ss_pred ceeEeeecccchhhhhhhcCCCe----EEEEeccCCCCcchhHHHHhh----cc-------cchhhccccccCCC-----
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPL----WVMNTVPVEAKINTLGVIYER----GL-------IGTYQNWCEAMSTY----- 537 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v----~~mnv~~~~~~~~~l~~~~eR----gl-------~~~~~~wce~~~~y----- 537 (637)
..+|||+|||.|.+++.|++..- =..+|+.+|.++..+..+.++ |+ +-+.+ .......
T Consensus 81 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~--~d~~~~~~~~~~ 158 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIH--KNIYQVNEEEKK 158 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEE--CCGGGCCHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEE--CChHhcccccCc
Confidence 56999999999999999876410 001445556666777777665 31 22221 1122222
Q ss_pred -CCccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006633 538 -PRTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 581 (637)
Q Consensus 538 -p~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 581 (637)
+..||+|+++..+. .++-++-++|+|||.+++.-.
T Consensus 159 ~~~~fD~I~~~~~~~---------~~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 159 ELGLFDAIHVGASAS---------ELPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHCCEEEEEECSBBS---------SCCHHHHHHEEEEEEEEEEEE
T ss_pred cCCCcCEEEECCchH---------HHHHHHHHhcCCCcEEEEEEc
Confidence 27899999876654 245788999999999999744
No 489
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.50 E-value=7e-05 Score=80.15 Aligned_cols=122 Identities=19% Similarity=0.225 Sum_probs=78.3
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc--cchhh-ccccccCCC---CCccceeeec
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTY---PRTYDLIHAD 547 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~-~wce~~~~y---p~t~Dl~H~~ 547 (637)
..+|||+|||+|+|+.+|++. ..+|+.+|.++..+..+.+. |+ +.+++ |.-+.+... +.+||+|.++
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~d 286 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLD 286 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEEC
Confidence 578999999999999999876 46778888877787777664 44 22222 111111111 4689999886
Q ss_pred cccccCCCC------cCHHHHHHHHhhcccCCcEEEEEeCH------HHHHHHHHHHhcCCceeEEe
Q 006633 548 SIFSLYKDR------CEMEDVLLEMDRILRPEGSVIIRDDV------DILVKIKSITDGMEWEGRIA 602 (637)
Q Consensus 548 ~lfs~~~~~------c~~~~~l~e~dRiLrPgG~~i~~d~~------~~~~~~~~~~~~~~W~~~~~ 602 (637)
--....... -....++.++-|+|+|||.+++.... .....+++.+.....+..+.
T Consensus 287 pP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~~~~i 353 (382)
T 1wxx_A 287 PPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHHMTEPLFYAMVAEAAQDAHRLLRVV 353 (382)
T ss_dssp CCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEE
Confidence 432111111 22357889999999999999997432 23455555666665555443
No 490
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.50 E-value=7.8e-05 Score=79.26 Aligned_cols=97 Identities=15% Similarity=0.183 Sum_probs=64.0
Q ss_pred CCceeEeeecccchhhhhhhcCC--CeEEEEeccCCCCcchhHHHHhhcccchhhccccccCCCCCccceeeeccccccC
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDD--PLWVMNTVPVEAKINTLGVIYERGLIGTYQNWCEAMSTYPRTYDLIHADSIFSLY 553 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~--~v~~mnv~~~~~~~~~l~~~~eRgl~~~~~~wce~~~~yp~t~Dl~H~~~lfs~~ 553 (637)
....+|||+|||.|.++.+|+++ ++- ++-.|.+ .++..+.++.-+.... ...|.++|.. |+|.+..++-.+
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~---~~~~D~~-~~~~~a~~~~~v~~~~--~D~~~~~p~~-D~v~~~~vlh~~ 272 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIK---GVNFDLP-HVISEAPQFPGVTHVG--GDMFKEVPSG-DTILMKWILHDW 272 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCE---EEEEECH-HHHTTCCCCTTEEEEE--CCTTTCCCCC-SEEEEESCGGGS
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCe---EEEecCH-HHHHhhhhcCCeEEEe--CCcCCCCCCC-CEEEehHHhccC
Confidence 45789999999999999999763 332 2223332 4444433332122221 1233466765 999988777655
Q ss_pred CCCcCHHHHHHHHhhcccCCcEEEEEe
Q 006633 554 KDRCEMEDVLLEMDRILRPEGSVIIRD 580 (637)
Q Consensus 554 ~~~c~~~~~l~e~dRiLrPgG~~i~~d 580 (637)
.+. +...+|-++-|+|||||+++|.|
T Consensus 273 ~d~-~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 273 SDQ-HCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp CHH-HHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CHH-HHHHHHHHHHHHcCCCCEEEEEE
Confidence 432 44689999999999999999975
No 491
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.49 E-value=0.00038 Score=78.19 Aligned_cols=120 Identities=16% Similarity=0.124 Sum_probs=76.9
Q ss_pred HHHHHHHHHHhccc--CCCCCEEEEECCCCchHHHHHhhc-------CCEEEEcCccccHHHHHHHHHHcCC---CeEEE
Q 006633 202 DAYIDDIGKLINLK--DGSIRTAIDTGCGVASWGAYLMSR-------NILAVSFAPRDTHEAQVQFALERGV---PALIG 269 (637)
Q Consensus 202 ~~~i~~L~~lL~~~--~g~~r~VLDIGCGtG~~a~~La~~-------~v~~vdisp~Dls~a~i~~A~erg~---~~~~~ 269 (637)
...++.+.+++... +..+.+|||.+||+|.+...++++ .+.++++.+....-+..+.. -.++ ...+.
T Consensus 203 ~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~-l~gi~~~~~~I~ 281 (542)
T 3lkd_A 203 QPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMI-LHGVPIENQFLH 281 (542)
T ss_dssp HHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHH-HTTCCGGGEEEE
T ss_pred HHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHH-HcCCCcCccceE
Confidence 44666777776532 224559999999999988777654 34556664433333332222 2344 35677
Q ss_pred EeccccC--C-CCCCCeeEEEeccccc-cCCcC--------------------CHHHHHHHHHhccc-CCeEEEEEeC
Q 006633 270 VMASIRL--P-YPSRAFDMAHCSRCLI-PWGQY--------------------ADGLYLIEVDRVLR-PGGYWILSGP 322 (637)
Q Consensus 270 ~~d~~~L--p-fpd~sFDlV~~s~~L~-h~~~~--------------------d~~~~L~ei~RvLK-PGG~Lvls~p 322 (637)
.+|+... | ++...||+|+++.-+. .|... ..-.++..+.+.|+ |||++.+..|
T Consensus 282 ~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 282 NADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp ESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred ecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEec
Confidence 7887665 3 4567899999975442 12100 11248999999999 9999999877
No 492
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=97.48 E-value=0.0005 Score=70.01 Aligned_cols=130 Identities=13% Similarity=0.027 Sum_probs=78.3
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh------cc----cchhhccccccCCCCCccceeee
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER------GL----IGTYQNWCEAMSTYPRTYDLIHA 546 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR------gl----~~~~~~wce~~~~yp~t~Dl~H~ 546 (637)
..++|||+|||.|+++.++++.+ ..|+-+|..+.++.++.++ ++ +.+. ++.-..|+.+||+|-+
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~---~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~---~~D~~~~~~~fD~Ii~ 145 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD---THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHA---KQLLDLDIKKYDLIFC 145 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS---CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEE---SSGGGSCCCCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC---CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEE---echHHHHHhhCCEEEE
Confidence 35799999999999999998874 4566666665677666543 11 1111 1211223388999987
Q ss_pred ccccccCCCCcCHHHHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCceeEEeccCCCCC-CcceEEEEEec
Q 006633 547 DSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIADHENGPR-QREKILFANKK 620 (637)
Q Consensus 547 ~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~e~~~~-~~~~~l~~~K~ 620 (637)
+. -+...++-++-|+|+|||.+++.. ..+.+..+.+.++..--.+.. ....-|. +...+++|.|.
T Consensus 146 d~--------~dp~~~~~~~~~~L~pgG~lv~~~~~~~~~~~~~~~~~~~l~~~F~~~~~-~~~~vP~~g~~~~~~as~~ 216 (262)
T 2cmg_A 146 LQ--------EPDIHRIDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGGVFSVAMP-FVAPLRILSNKGYIYASFK 216 (262)
T ss_dssp SS--------CCCHHHHHHHHTTEEEEEEEEEEEECTTTCHHHHHHHHHHHHTTCSEEEE-ECCTTCTTCCEEEEEEESS
T ss_pred CC--------CChHHHHHHHHHhcCCCcEEEEEcCCcccCHHHHHHHHHHHHHhCCceEE-EEEccCCCcccEEEEeeCC
Confidence 51 122347889999999999999962 123344444444443222322 2232232 23447788887
Q ss_pred C
Q 006633 621 Y 621 (637)
Q Consensus 621 ~ 621 (637)
+
T Consensus 217 ~ 217 (262)
T 2cmg_A 217 T 217 (262)
T ss_dssp C
T ss_pred C
Confidence 4
No 493
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.48 E-value=5.2e-05 Score=77.14 Aligned_cols=85 Identities=16% Similarity=0.066 Sum_probs=52.7
Q ss_pred HHHHhcccCCCCCEEEEECCCCchHHHHHhhcC--CEEEEcCccc--cHHHHHHHHHHc----CC--CeEEEEeccccC-
Q 006633 208 IGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRD--THEAQVQFALER----GV--PALIGVMASIRL- 276 (637)
Q Consensus 208 L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~--v~~vdisp~D--ls~a~i~~A~er----g~--~~~~~~~d~~~L- 276 (637)
+.+.+.... +.+|||+|||+|.++..|++.+ |+++|+++.. +-..+++.|+++ +. .+.+..+|...+
T Consensus 75 l~~a~~~~~--~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l 152 (258)
T 2r6z_A 75 IAKAVNHTA--HPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQM 152 (258)
T ss_dssp HHHHTTGGG--CCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHH
T ss_pred HHHHhCcCC--cCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHH
Confidence 444443333 3489999999999999999885 5556554400 000444444332 22 378888887663
Q ss_pred C-CCC--CCeeEEEecccccc
Q 006633 277 P-YPS--RAFDMAHCSRCLIP 294 (637)
Q Consensus 277 p-fpd--~sFDlV~~s~~L~h 294 (637)
+ +++ ++||+|++...+.+
T Consensus 153 ~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 153 PALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHHCCCSEEEECCCC--
T ss_pred HhhhccCCCccEEEECCCCCC
Confidence 3 444 78999999876644
No 494
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.45 E-value=5.7e-05 Score=77.02 Aligned_cols=99 Identities=18% Similarity=0.153 Sum_probs=63.1
Q ss_pred ceeEeeecccchhhhhhhcC--CCeEEEEeccCCCCcchhHHHHhh----cc--cchhh-ccccccCCC----CCcccee
Q 006633 478 YRNLLDMNAYLGGFAAALVD--DPLWVMNTVPVEAKINTLGVIYER----GL--IGTYQ-NWCEAMSTY----PRTYDLI 544 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~--~~v~~mnv~~~~~~~~~l~~~~eR----gl--~~~~~-~wce~~~~y----p~t~Dl~ 544 (637)
..+|||+|||.|+++.+|++ .+- -.|+.+|.++..+..+.++ |+ +-+++ |. +.+... +..||+|
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~--~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~-~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNK--GTIVAVEISKTRTKALKSNINRMGVLNTIIINADM-RKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTC--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCH-HHHHHHHHHTTCCEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCC--CEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCCh-HhcchhhhhccccCCEE
Confidence 56899999999999988875 231 1345556666777776655 54 22222 11 112221 4689999
Q ss_pred eeccccccCC---------------CCcCHHHHHHHHhhcccCCcEEEEE
Q 006633 545 HADSIFSLYK---------------DRCEMEDVLLEMDRILRPEGSVIIR 579 (637)
Q Consensus 545 H~~~lfs~~~---------------~~c~~~~~l~e~dRiLrPgG~~i~~ 579 (637)
-++--+|... ..-....+|-++-|+|||||.++++
T Consensus 161 l~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~s 210 (274)
T 3ajd_A 161 LLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYS 210 (274)
T ss_dssp EEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 8873333211 0023468899999999999999996
No 495
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.45 E-value=4.6e-05 Score=74.85 Aligned_cols=92 Identities=16% Similarity=0.116 Sum_probs=60.0
Q ss_pred ceeEeeecccchhhhhhhcCC-Ce----EEEEeccCCCCcchhHHHHhhc---------c--cchhh-ccccccCCCC--
Q 006633 478 YRNLLDMNAYLGGFAAALVDD-PL----WVMNTVPVEAKINTLGVIYERG---------L--IGTYQ-NWCEAMSTYP-- 538 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~-~v----~~mnv~~~~~~~~~l~~~~eRg---------l--~~~~~-~wce~~~~yp-- 538 (637)
..+|||+|||.|.+++.|++. +. ..-.|+.+|.++..+..+.++. . +-+.+ |.. ..+|
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~---~~~~~~ 161 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGR---KGYPPN 161 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGG---GCCGGG
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcc---cCCCcC
Confidence 568999999999999998763 10 0013445565556777766542 1 22222 222 2344
Q ss_pred CccceeeeccccccCCCCcCHHHHHHHHhhcccCCcEEEEEeC
Q 006633 539 RTYDLIHADSIFSLYKDRCEMEDVLLEMDRILRPEGSVIIRDD 581 (637)
Q Consensus 539 ~t~Dl~H~~~lfs~~~~~c~~~~~l~e~dRiLrPgG~~i~~d~ 581 (637)
..||+|+++..+.. ++-++-|+|||||.+++.-.
T Consensus 162 ~~fD~I~~~~~~~~---------~~~~~~~~LkpgG~lvi~~~ 195 (227)
T 1r18_A 162 APYNAIHVGAAAPD---------TPTELINQLASGGRLIVPVG 195 (227)
T ss_dssp CSEEEEEECSCBSS---------CCHHHHHTEEEEEEEEEEES
T ss_pred CCccEEEECCchHH---------HHHHHHHHhcCCCEEEEEEe
Confidence 68999998665532 34788999999999999753
No 496
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.43 E-value=0.0001 Score=79.56 Aligned_cols=121 Identities=19% Similarity=0.303 Sum_probs=76.4
Q ss_pred ceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cccchh-h-ccccccCCCCCccceeeeccc-c
Q 006633 478 YRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GLIGTY-Q-NWCEAMSTYPRTYDLIHADSI-F 550 (637)
Q Consensus 478 ~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl~~~~-~-~wce~~~~yp~t~Dl~H~~~l-f 550 (637)
..+|||++||+|+|+.+++..+-- |+.+|.++.++..+.++ |+-..+ + |..+.+..++..||+|.++-- |
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga~---V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f 291 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGAY---ALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTL 291 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCE---EEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCC
T ss_pred CCeEEEcccchhHHHHHHHHcCCe---EEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcC
Confidence 468999999999999999887642 66778887788777654 442111 1 222222334545999998643 2
Q ss_pred ccCCC-----CcCHHHHHHHHhhcccCCcEEEEEe------CHHHHHHHHHHHhcCCceeEE
Q 006633 551 SLYKD-----RCEMEDVLLEMDRILRPEGSVIIRD------DVDILVKIKSITDGMEWEGRI 601 (637)
Q Consensus 551 s~~~~-----~c~~~~~l~e~dRiLrPgG~~i~~d------~~~~~~~~~~~~~~~~W~~~~ 601 (637)
+..+. ......++.++-|+|+|||++++.. ..+....+++.+.....+..+
T Consensus 292 ~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~~~~~~f~~~v~~a~~~~g~~~~i 353 (393)
T 4dmg_A 292 VKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYHLRLEDLLEVARRAAADLGRRLRV 353 (393)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTCCEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCCCCHHHHHHHHHHHHHHhCCeEEE
Confidence 21111 1133478888899999999999653 223445666666554444443
No 497
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.38 E-value=2.7e-05 Score=77.81 Aligned_cols=102 Identities=12% Similarity=0.012 Sum_probs=56.1
Q ss_pred CceeEeeecccchhhhhhhcCCCeEEEEeccCCCCcchhHHHHhh----cc---cchhh-cccc-ccCCCC----Cccce
Q 006633 477 RYRNLLDMNAYLGGFAAALVDDPLWVMNTVPVEAKINTLGVIYER----GL---IGTYQ-NWCE-AMSTYP----RTYDL 543 (637)
Q Consensus 477 ~~r~vlD~~~g~ggfaa~l~~~~v~~mnv~~~~~~~~~l~~~~eR----gl---~~~~~-~wce-~~~~yp----~t~Dl 543 (637)
...+|||+|||+|.++.+|+++.- ...|+.+|.++.++..+.++ |+ +-+++ |..+ -+..++ .+||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 356899999999999988876410 13566777777788877664 44 33333 2111 122344 58999
Q ss_pred eeeccccccCC---C---------CcCHHHHHHHHhhcccCCcEEEEE
Q 006633 544 IHADSIFSLYK---D---------RCEMEDVLLEMDRILRPEGSVIIR 579 (637)
Q Consensus 544 ~H~~~lfs~~~---~---------~c~~~~~l~e~dRiLrPgG~~i~~ 579 (637)
|-++--|-... . ......++-++.|+|||||.+.+-
T Consensus 144 i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 144 CMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFV 191 (254)
T ss_dssp EEECCCCC-------------------------CTTTTHHHHTHHHHH
T ss_pred EEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEE
Confidence 99874432111 0 011123455666777776665443
No 498
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.35 E-value=0.00039 Score=70.47 Aligned_cols=82 Identities=12% Similarity=0.070 Sum_probs=56.4
Q ss_pred HHHHHHHHHhcccCCCCCEEEEECCCCchHHHHHhhc-C--CEEEEcCccccHHHHHHHHHHcC---CCeEEEEeccccC
Q 006633 203 AYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSR-N--ILAVSFAPRDTHEAQVQFALERG---VPALIGVMASIRL 276 (637)
Q Consensus 203 ~~i~~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~-~--v~~vdisp~Dls~a~i~~A~erg---~~~~~~~~d~~~L 276 (637)
..++.+.+.+...++. +|||||||+|.++. +... . ++++ |+++.+++.++++. .++.+..+|+..+
T Consensus 8 ~i~~~iv~~~~~~~~~--~VLEIG~G~G~lt~-l~~~~~~~v~av-----Eid~~~~~~a~~~~~~~~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQ--AMVEIGPGLAALTE-PVGERLDQLTVI-----ELDRDLAARLQTHPFLGPKLTIYQQDAMTF 79 (252)
T ss_dssp HHHHHHHHHHCCCTTC--CEEEECCTTTTTHH-HHHTTCSCEEEE-----CCCHHHHHHHHTCTTTGGGEEEECSCGGGC
T ss_pred HHHHHHHHhcCCCCcC--EEEEECCCCcHHHH-hhhCCCCeEEEE-----ECCHHHHHHHHHHhccCCceEEEECchhhC
Confidence 3566677777655544 89999999999999 7543 3 5555 44556777776653 2578888998888
Q ss_pred CCCC-----CCeeEEEecccc
Q 006633 277 PYPS-----RAFDMAHCSRCL 292 (637)
Q Consensus 277 pfpd-----~sFDlV~~s~~L 292 (637)
++++ +..|.|+++.-+
T Consensus 80 ~~~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 80 NFGELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp CHHHHHHHHTSCEEEEEECCT
T ss_pred CHHHhhcccCCceEEEECCCC
Confidence 7653 235788887643
No 499
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=97.35 E-value=0.00015 Score=76.15 Aligned_cols=143 Identities=11% Similarity=0.117 Sum_probs=87.9
Q ss_pred CCceeEeeecccchhhhhhhcCCCe----EEEEeccCCCCcchhHHHHh----hcc-cchhhccccccCCCC-Cccceee
Q 006633 476 GRYRNLLDMNAYLGGFAAALVDDPL----WVMNTVPVEAKINTLGVIYE----RGL-IGTYQNWCEAMSTYP-RTYDLIH 545 (637)
Q Consensus 476 ~~~r~vlD~~~g~ggfaa~l~~~~v----~~mnv~~~~~~~~~l~~~~e----Rgl-~~~~~~wce~~~~yp-~t~Dl~H 545 (637)
....+|||.|||+|+|..++.+.-- -..+|..+|..+.++.++.. +|+ +.+++ +..+...+ ..||+|-
T Consensus 129 ~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~--~D~l~~~~~~~fD~Ii 206 (344)
T 2f8l_A 129 KKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLH--QDGLANLLVDPVDVVI 206 (344)
T ss_dssp CSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEE--SCTTSCCCCCCEEEEE
T ss_pred CCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEE--CCCCCccccCCccEEE
Confidence 4578999999999999988765310 01467777777677777765 354 11221 23444444 7899999
Q ss_pred eccccccCCC--------------CcCHH-HHHHHHhhcccCCcEEEEEe-----CHHHHHHHHHHHhcCCceeEEeccC
Q 006633 546 ADSIFSLYKD--------------RCEME-DVLLEMDRILRPEGSVIIRD-----DVDILVKIKSITDGMEWEGRIADHE 605 (637)
Q Consensus 546 ~~~lfs~~~~--------------~c~~~-~~l~e~dRiLrPgG~~i~~d-----~~~~~~~~~~~~~~~~W~~~~~~~e 605 (637)
++--|+.... .-+.. .++.++-+.|+|||.+++-- ..+....+++.+..-.|-..+.+..
T Consensus 207 ~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~~~~~~~~~~ir~~l~~~~~~~~ii~lp 286 (344)
T 2f8l_A 207 SDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLP 286 (344)
T ss_dssp EECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGGGGGSTTHHHHHHHHHHHEEEEEEEECC
T ss_pred ECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECchhcCCchHHHHHHHHHhCCeEEEeeeCC
Confidence 9887754311 11122 47888999999999998864 2223456666554444533222211
Q ss_pred ----CCCCCcceEEEEEec
Q 006633 606 ----NGPRQREKILFANKK 620 (637)
Q Consensus 606 ----~~~~~~~~~l~~~K~ 620 (637)
.+.....-|+|.+|.
T Consensus 287 ~~~F~~~~~~~~i~vl~k~ 305 (344)
T 2f8l_A 287 ETLFKSEQARKSILILEKA 305 (344)
T ss_dssp GGGSCC-CCCEEEEEEEEC
T ss_pred hhhccCCCCceEEEEEECC
Confidence 222246778888884
No 500
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.35 E-value=9.5e-05 Score=75.40 Aligned_cols=106 Identities=12% Similarity=0.100 Sum_probs=62.1
Q ss_pred HHHHHhcccCCCCCEEEEECCCCchHHHHHhhcC--CEEEEcCccccH--HHHHHHHHHc----C---CCeEEEEecccc
Q 006633 207 DIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRN--ILAVSFAPRDTH--EAQVQFALER----G---VPALIGVMASIR 275 (637)
Q Consensus 207 ~L~~lL~~~~g~~r~VLDIGCGtG~~a~~La~~~--v~~vdisp~Dls--~a~i~~A~er----g---~~~~~~~~d~~~ 275 (637)
.+.+.+...++...+|||+|||+|..+..++.++ |++++.++.... ...++.+.++ + ..+.+...|...
T Consensus 77 ~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~ 156 (258)
T 2oyr_A 77 AVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLT 156 (258)
T ss_dssp HHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHH
T ss_pred HHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHH
Confidence 3555665555422589999999999999999875 555555442111 1122222211 1 236777777655
Q ss_pred -CCCCCCCeeEEEeccccccCCcCCHHHHHHHHHhcccCCe
Q 006633 276 -LPYPSRAFDMAHCSRCLIPWGQYADGLYLIEVDRVLRPGG 315 (637)
Q Consensus 276 -Lpfpd~sFDlV~~s~~L~h~~~~d~~~~L~ei~RvLKPGG 315 (637)
++.....||+|++...+ +.. ....++++..++||+.+
T Consensus 157 ~L~~~~~~fDvV~lDP~y-~~~--~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 157 ALTDITPRPQVVYLDPMF-PHK--QKSALVKKEMRVFQSLV 194 (258)
T ss_dssp HSTTCSSCCSEEEECCCC-CCC--CC-----HHHHHHHHHS
T ss_pred HHHhCcccCCEEEEcCCC-CCc--ccchHHHHHHHHHHHhh
Confidence 34323479999998877 333 23356777788888765
Done!