Query 006639
Match_columns 637
No_of_seqs 275 out of 1648
Neff 6.5
Searched_HMMs 46136
Date Thu Mar 28 12:20:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006639.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/006639hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02190 cellulose synthase-li 100.0 1E-157 3E-162 1316.2 52.6 626 1-631 1-639 (756)
2 PLN02638 cellulose synthase A 100.0 6E-158 1E-162 1351.9 50.5 627 5-633 251-962 (1079)
3 PLN02400 cellulose synthase 100.0 2E-157 3E-162 1348.9 49.9 627 5-633 258-967 (1085)
4 PLN02436 cellulose synthase A 100.0 5E-157 1E-161 1339.2 53.3 627 5-633 267-978 (1094)
5 PLN02195 cellulose synthase A 100.0 1E-156 2E-161 1332.5 53.7 627 5-633 154-859 (977)
6 PLN02189 cellulose synthase 100.0 2E-156 4E-161 1336.0 51.5 630 3-634 231-925 (1040)
7 PLN02915 cellulose synthase A 100.0 5E-156 1E-160 1333.0 54.4 627 5-633 189-926 (1044)
8 PLN02248 cellulose synthase-li 100.0 2E-152 5E-157 1304.1 52.9 626 5-634 264-1020(1135)
9 PLN02893 Cellulose synthase-li 100.0 3E-150 6E-155 1264.1 52.6 605 1-633 4-630 (734)
10 PF03552 Cellulose_synt: Cellu 100.0 6E-139 1E-143 1163.5 33.8 536 95-632 1-607 (720)
11 PRK11498 bcsA cellulose syntha 100.0 2.6E-65 5.6E-70 592.3 45.0 415 19-636 182-616 (852)
12 TIGR03030 CelA cellulose synth 100.0 6.3E-65 1.4E-69 590.0 46.6 430 21-635 55-504 (713)
13 PRK05454 glucosyltransferase M 100.0 1.1E-39 2.3E-44 374.3 46.9 348 21-542 40-415 (691)
14 PRK14583 hmsR N-glycosyltransf 100.0 9.5E-37 2.1E-41 337.4 40.2 254 90-531 72-334 (444)
15 cd04191 Glucan_BSP_ModH Glucan 100.0 6.2E-38 1.3E-42 322.6 24.4 239 95-498 1-253 (254)
16 COG1215 Glycosyltransferases, 100.0 3.1E-35 6.6E-40 322.2 30.6 227 92-502 53-290 (439)
17 PRK11204 N-glycosyltransferase 100.0 9.8E-34 2.1E-38 310.4 40.7 228 89-503 50-286 (420)
18 TIGR03111 glyc2_xrt_Gpos1 puta 100.0 5.4E-33 1.2E-37 307.1 38.1 275 90-552 46-339 (439)
19 PRK14716 bacteriophage N4 adso 100.0 8.1E-31 1.8E-35 291.9 36.7 261 89-528 62-355 (504)
20 PRK11234 nfrB bacteriophage N4 100.0 7.3E-29 1.6E-33 286.5 35.8 237 89-501 59-334 (727)
21 cd06437 CESA_CaSu_A2 Cellulose 100.0 8.2E-30 1.8E-34 256.3 22.0 222 93-496 1-232 (232)
22 cd06421 CESA_CelA_like CESA_Ce 100.0 2.6E-29 5.6E-34 250.9 20.9 224 93-500 1-234 (234)
23 cd06427 CESA_like_2 CESA_like_ 100.0 1E-28 2.3E-33 250.4 21.4 226 93-502 1-236 (241)
24 cd06435 CESA_NdvC_like NdvC_li 100.0 5E-28 1.1E-32 243.2 22.6 225 96-502 1-234 (236)
25 PF13641 Glyco_tranf_2_3: Glyc 99.9 3.1E-28 6.8E-33 243.1 9.8 220 93-495 1-228 (228)
26 TIGR03472 HpnI hopanoid biosyn 99.9 1.1E-24 2.3E-29 236.2 33.4 224 90-497 38-273 (373)
27 cd04190 Chitin_synth_C C-termi 99.9 1.3E-26 2.8E-31 236.6 14.8 168 272-498 64-243 (244)
28 PRK15489 nfrB bacteriophage N4 99.9 6.5E-24 1.4E-28 243.0 34.2 233 89-500 67-341 (703)
29 cd02520 Glucosylceramide_synth 99.9 1.7E-24 3.8E-29 212.7 18.2 193 93-495 1-195 (196)
30 cd04192 GT_2_like_e Subfamily 99.9 9.1E-24 2E-28 209.6 19.8 218 97-495 1-229 (229)
31 cd06434 GT2_HAS Hyaluronan syn 99.9 4.2E-23 9E-28 206.8 17.9 224 94-498 1-234 (235)
32 COG2943 MdoH Membrane glycosyl 99.9 1.6E-20 3.5E-25 201.7 37.7 217 252-546 213-439 (736)
33 TIGR03469 HonB hopene-associat 99.9 4.8E-21 1E-25 208.5 30.4 227 89-494 36-280 (384)
34 cd06439 CESA_like_1 CESA_like_ 99.9 7.8E-22 1.7E-26 200.0 21.5 220 89-499 25-251 (251)
35 cd02525 Succinoglycan_BP_ExoA 99.8 9.5E-20 2.1E-24 183.1 22.4 222 94-502 1-233 (249)
36 cd06436 GlcNAc-1-P_transferase 99.8 1.3E-18 2.8E-23 170.8 14.2 160 97-368 1-176 (191)
37 PF13632 Glyco_trans_2_3: Glyc 99.7 1.8E-17 3.8E-22 162.1 15.1 133 288-496 1-143 (193)
38 cd06438 EpsO_like EpsO protein 99.7 6.5E-18 1.4E-22 164.1 11.1 156 97-367 1-167 (183)
39 cd04184 GT2_RfbC_Mx_like Myxoc 99.7 5E-17 1.1E-21 158.8 16.6 123 93-329 1-123 (202)
40 cd04195 GT2_AmsE_like GT2_AmsE 99.7 8.1E-16 1.8E-20 150.3 16.1 119 96-328 1-119 (201)
41 cd06433 GT_2_WfgS_like WfgS an 99.6 9.9E-15 2.1E-19 141.0 15.6 114 96-328 1-114 (202)
42 cd02510 pp-GalNAc-T pp-GalNAc- 99.6 4E-14 8.7E-19 148.5 20.3 110 96-313 1-110 (299)
43 cd04196 GT_2_like_d Subfamily 99.6 1.8E-14 3.9E-19 141.4 16.5 120 96-330 1-120 (214)
44 cd02522 GT_2_like_a GT_2_like_ 99.6 8.3E-14 1.8E-18 138.0 18.4 43 95-143 1-43 (221)
45 PLN02726 dolichyl-phosphate be 99.6 8.2E-14 1.8E-18 141.8 18.8 42 267-313 79-120 (243)
46 PF03142 Chitin_synth_2: Chiti 99.5 4.3E-12 9.3E-17 141.8 30.7 168 284-501 200-379 (527)
47 cd04186 GT_2_like_c Subfamily 99.5 1.1E-13 2.4E-18 129.6 15.4 156 97-468 1-158 (166)
48 cd06420 GT2_Chondriotin_Pol_N 99.5 2.3E-13 5E-18 130.7 16.9 104 97-311 1-104 (182)
49 PF13506 Glyco_transf_21: Glyc 99.5 7.3E-14 1.6E-18 136.3 13.2 149 266-494 15-175 (175)
50 cd06442 DPM1_like DPM1_like re 99.5 3.8E-13 8.2E-18 133.5 18.0 105 97-313 1-105 (224)
51 cd06913 beta3GnTL1_like Beta 1 99.5 5.9E-13 1.3E-17 132.7 19.4 111 97-313 1-111 (219)
52 cd02526 GT2_RfbF_like RfbF is 99.5 1.9E-13 4.2E-18 137.0 14.0 147 253-480 49-207 (237)
53 PRK10073 putative glycosyl tra 99.5 1.3E-12 2.8E-17 139.7 18.6 116 91-322 4-119 (328)
54 cd06423 CESA_like CESA_like is 99.5 4E-13 8.7E-18 125.1 12.1 116 97-327 1-116 (180)
55 cd04185 GT_2_like_b Subfamily 99.5 1.7E-12 3.6E-17 127.3 16.5 113 97-324 1-113 (202)
56 PRK10018 putative glycosyl tra 99.4 3.3E-12 7.2E-17 133.6 17.9 109 91-312 3-111 (279)
57 cd04188 DPG_synthase DPG_synth 99.4 5.2E-12 1.1E-16 125.2 16.2 41 268-313 69-109 (211)
58 PF00535 Glycos_transf_2: Glyc 99.4 9E-13 1.9E-17 122.7 9.5 158 96-368 1-166 (169)
59 PRK10063 putative glycosyl tra 99.3 3.6E-11 7.8E-16 123.6 18.1 51 93-147 1-52 (248)
60 PTZ00260 dolichyl-phosphate be 99.3 3.1E-10 6.8E-15 121.7 24.0 117 90-313 67-189 (333)
61 TIGR01556 rhamnosyltran L-rham 99.3 1.4E-10 2.9E-15 120.6 17.7 63 253-324 47-109 (281)
62 cd04179 DPM_DPG-synthase_like 99.2 8.8E-11 1.9E-15 112.9 13.1 119 97-330 1-119 (185)
63 cd04187 DPM1_like_bac Bacteria 99.2 3.7E-10 8E-15 108.9 15.5 92 267-368 66-160 (181)
64 PRK10714 undecaprenyl phosphat 99.2 2.1E-08 4.5E-13 107.3 28.2 41 267-312 76-116 (325)
65 PRK13915 putative glucosyl-3-p 99.1 2.6E-10 5.6E-15 121.0 12.2 124 91-325 29-152 (306)
66 cd00761 Glyco_tranf_GTA_type G 99.1 3.2E-09 7E-14 96.2 15.0 112 97-324 1-112 (156)
67 COG1216 Predicted glycosyltran 99.0 3.7E-09 8E-14 111.8 15.7 123 92-330 2-125 (305)
68 PF10111 Glyco_tranf_2_2: Glyc 99.0 6.8E-09 1.5E-13 108.6 17.1 58 267-330 74-131 (281)
69 KOG2571 Chitin synthase/hyalur 99.0 9.2E-09 2E-13 119.3 17.5 150 282-495 437-596 (862)
70 COG0463 WcaA Glycosyltransfera 98.7 7.2E-08 1.6E-12 89.8 11.2 50 92-147 2-51 (291)
71 cd02511 Beta4Glucosyltransfera 98.7 9.5E-08 2.1E-12 96.5 12.9 42 267-313 57-98 (229)
72 KOG2977 Glycosyltransferase [G 98.2 1.7E-05 3.7E-10 81.6 12.1 114 94-312 68-186 (323)
73 KOG2978 Dolichol-phosphate man 98.1 3.2E-05 7E-10 75.1 10.9 52 251-312 63-114 (238)
74 KOG2547 Ceramide glucosyltrans 98.0 0.00017 3.8E-09 76.6 16.5 149 267-494 156-314 (431)
75 cd02514 GT13_GLCNAC-TI GT13_GL 97.8 0.0003 6.5E-09 75.5 13.6 44 95-142 2-45 (334)
76 KOG3737 Predicted polypeptide 96.2 0.015 3.3E-07 62.4 7.9 49 89-140 151-199 (603)
77 KOG3738 Predicted polypeptide 95.3 0.049 1.1E-06 58.9 7.5 49 90-141 121-169 (559)
78 KOG3736 Polypeptide N-acetylga 94.7 0.035 7.6E-07 63.5 4.9 50 89-141 138-187 (578)
79 PF13704 Glyco_tranf_2_4: Glyc 93.7 0.35 7.5E-06 41.9 8.1 35 107-146 3-37 (97)
80 PF03452 Anp1: Anp1; InterPro 91.4 2.7 5.8E-05 44.0 12.3 57 90-150 22-80 (269)
81 PF13712 Glyco_tranf_2_5: Glyc 90.6 0.81 1.8E-05 46.3 7.5 50 267-323 40-89 (217)
82 TIGR02460 osmo_MPGsynth mannos 87.0 3.5 7.6E-05 44.4 9.3 46 264-312 139-184 (381)
83 PF02364 Glucan_synthase: 1,3- 84.5 2.8 6.1E-05 49.9 7.9 75 445-525 408-483 (817)
84 PRK14503 mannosyl-3-phosphogly 81.9 6 0.00013 42.9 8.4 45 265-312 141-185 (393)
85 PRK14502 bifunctional mannosyl 79.9 9.3 0.0002 45.1 9.8 46 264-312 144-189 (694)
86 cd00899 b4GalT Beta-4-Galactos 73.7 6.5 0.00014 40.0 5.6 53 448-500 138-200 (219)
87 PF13896 Glyco_transf_49: Glyc 65.9 7.6 0.00017 41.7 4.5 46 274-324 120-165 (317)
88 PF09488 Osmo_MPGsynth: Mannos 64.6 17 0.00037 39.5 6.6 43 267-312 142-184 (381)
89 PF05679 CHGN: Chondroitin N-a 58.8 95 0.0021 35.6 11.8 37 267-307 326-362 (499)
90 PF03071 GNT-I: GNT-I family; 57.6 9.1 0.0002 42.8 3.3 51 90-145 90-141 (434)
91 PF01644 Chitin_synth_1: Chiti 55.9 1.2E+02 0.0025 29.7 10.1 28 283-311 136-163 (163)
92 PRK09382 ispDF bifunctional 2- 50.7 39 0.00084 37.3 6.8 58 269-330 83-159 (378)
93 PF06306 CgtA: Beta-1,4-N-acet 36.3 1.1E+02 0.0023 33.1 7.0 37 266-306 159-195 (347)
94 TIGR02665 molyb_mobA molybdopt 31.5 1.7E+02 0.0037 27.9 7.3 42 267-312 73-114 (186)
95 PF02709 Glyco_transf_7C: N-te 31.4 44 0.00095 28.3 2.7 40 416-469 25-67 (78)
96 COG4092 Predicted glycosyltran 27.3 3.7E+02 0.008 28.5 8.9 57 249-308 60-116 (346)
97 PF02434 Fringe: Fringe-like; 25.6 1.8E+02 0.0039 30.1 6.6 28 284-312 85-112 (252)
98 cd02540 GT2_GlmU_N_bac N-termi 24.9 2.6E+02 0.0057 27.4 7.5 43 267-313 73-117 (229)
99 PF12804 NTP_transf_3: MobA-li 23.9 2.3E+02 0.0049 26.2 6.5 53 267-325 70-123 (160)
100 PF04724 Glyco_transf_17: Glyc 22.6 1.4E+02 0.0031 32.7 5.4 35 271-307 165-199 (356)
101 cd02503 MobA MobA catalyzes th 22.4 3.2E+02 0.0069 25.9 7.3 41 267-311 69-109 (181)
102 PF11316 Rhamno_transf: Putati 22.0 8.7E+02 0.019 24.9 12.0 42 269-312 97-140 (234)
103 cd02516 CDP-ME_synthetase CDP- 21.2 2.4E+02 0.0052 27.5 6.4 44 268-312 79-122 (218)
104 TIGR03584 PseF pseudaminic aci 21.2 8.4E+02 0.018 24.4 10.5 58 268-325 77-134 (222)
No 1
>PLN02190 cellulose synthase-like protein
Probab=100.00 E-value=1.4e-157 Score=1316.22 Aligned_cols=626 Identities=54% Similarity=0.968 Sum_probs=576.9
Q ss_pred CCCCCCCCCCceeeeeccchHHHHHHHHHHHHHHHHHHHHhccccCchhHHHHHHHHHHHHHHHHHHHHHheeccccCCC
Q 006639 1 MANTKSSCLPLYEKVFHKNTYHRALDVIILFLLLCLLFYRLSTLKNHGFAWFLAFLCESCFTFIWILIVNCKWTPLTYKT 80 (637)
Q Consensus 1 ~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 80 (637)
|++.+.+.+||||+++++++++|++.++++++++.|++||+++.++.++.|+++++||+|++|+|+|+|+.+|+|++|.+
T Consensus 1 ~~~~~~~~~pL~~~~~~~~~~~r~~~~~vl~~~~~~l~~R~~~~~~~~~~W~~~~~~E~wf~~~WlL~q~~kw~pv~r~~ 80 (756)
T PLN02190 1 MADSSSSLPPLCERISHKSYFLRAVDLTILGLLFSLLLYRILHMSENDTVWLVAFLCESCFSFVWLLITCIKWSPAEYKP 80 (756)
T ss_pred CCcccCCCCCceeeeeccchhHHHHHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHHHhccceeeecCCCC
Confidence 67788889999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred CcchhhcccCCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhh
Q 006639 81 YPQRLQERIQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFC 160 (637)
Q Consensus 81 ~~~~l~~~~~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc 160 (637)
+|++|+++.++||+|||||||+||.||||++|+|||+|+|++|||++|++|||+|||+++.|+++|.||++|||+|||||
T Consensus 81 ~p~~l~~r~~~Lp~VDvFV~TaDP~kEPpl~v~nTvLSilA~dYP~eklscYvSDDG~s~LT~~al~EAa~FA~~WvPFC 160 (756)
T PLN02190 81 YPDRLDERVHDLPSVDMFVPTADPVREPPIIVVNTVLSLLAVNYPANKLACYVSDDGCSPLTYFSLKEASKFAKIWVPFC 160 (756)
T ss_pred CcHHHHHhhccCCcceEEEecCCCCcCCHHHHHHHHHHHHhccCCccccceEEecCCCcHhHHHHHHHHHHHHhhhcccc
Confidence 99999988778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccccCCCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEee
Q 006639 161 KKYNVQIRAPFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVIS 240 (637)
Q Consensus 161 ~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~ 240 (637)
||||||||+||+||+.. ..+..+++|++||++||+||||||.||+++.......+.+|+++.|++++++|||+||||++
T Consensus 161 rK~~IepRaPe~YF~~~-~~~~~~~~f~~e~~~~K~eYee~k~ri~~a~~~~~~~~~~~~~~~~~~~~~~dH~~iiqVll 239 (756)
T PLN02190 161 KKYNVRVRAPFRYFLNP-PVATEDSEFSKDWEMTKREYEKLSRKVEDATGDSHWLDAEDDFEAFSNTKPNDHSTIVKVVW 239 (756)
T ss_pred cccCCCcCCHHHHhcCC-CCCCCCchhHHHHHHHHHHHHHHHHHHHhhccCCCCcccCCcccccCCCCCCCCccceEEEe
Confidence 99999999999999963 23335689999999999999999999999865444444467889999999999999999999
Q ss_pred cCCCCC--CCCCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCC-
Q 006639 241 ENKGGL--SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNE- 317 (637)
Q Consensus 241 ~~~~~~--~~~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~- 317 (637)
+++++. +.++|+|+||+||||||++||+||||||+.+|||+++||+|||+++||||++|||++++++||||+|++.+
T Consensus 240 ~~~~~~~~~~~lP~LVYvSREKrP~~~Hh~KAGAmNaLlRVSavmtNaP~iLnlDCDmY~Nns~~~r~AmCf~ld~~~~~ 319 (756)
T PLN02190 240 ENKGGVGDEKEVPHLVYISREKRPNYLHHYKAGAMNFLVRVSGLMTNAPYMLNVDCDMYANEADVVRQAMCIFLQKSKNS 319 (756)
T ss_pred cCCCCccccccCceEEEEeccCCCCCCcccccchhHHHHHHhhhhccCCeEEEecCccccCchhHHHHhhhhhcCCCCCC
Confidence 986543 55899999999999999999999999999999999999999999999999999999999999999997644
Q ss_pred CcEEEEeCCccccCcchh-hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhccc---------cchHHHHH
Q 006639 318 NEFAFIQSPQYFYDRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQG---------NIVEDELL 387 (637)
Q Consensus 318 ~~va~VQtPq~f~D~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~---------~~~~~~~~ 387 (637)
+++||||+||+|+|+|+| +++||++.+.|+||+|||+|+||||+|||+||||.+++..+..+ .....++.
T Consensus 320 ~~~~fVQfPQ~F~D~y~n~~~v~f~~~~~GldGlqGP~YvGTGCffrR~alyG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 399 (756)
T PLN02190 320 NHCAFVQFPQEFYDSNTNELTVLQSYLGRGIAGIQGPIYIGSGCFHTRRVMYGLSSDDLEDDGSLSSVATREFLAEDSLA 399 (756)
T ss_pred CeeEEEeCchhhccccCccceEEEEEeeccccccCCcccccCCcceEeeeecCCCcccccccccccccccccccchhhhh
Confidence 489999999999999999 99999999999999999999999999999999998765533221 02233466
Q ss_pred HhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEe
Q 006639 388 KKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYC 467 (637)
Q Consensus 388 ~~~g~s~~~i~s~~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~ 467 (637)
++||+|.+|+.|+....++...... .+++.+++|++|++|+||++|+||+|+||.|+|+|||+.||++||++|||++|+
T Consensus 400 ~~fg~s~~f~~s~~~~~~~~~~~~~-~~~~~~~eA~~V~sC~YE~~T~WG~evG~~ygSitED~~TGl~mh~rGWrSvY~ 478 (756)
T PLN02190 400 REFGNSKEMVKSVVDALQRKPNPQN-SLTNSIEAAQEVGHCHYEYQTSWGNTIGWLYDSVAEDLNTSIGIHSRGWTSSYI 478 (756)
T ss_pred hhcCCcHHHHHHHHHHhccCCCCcc-chHHHHHHHHhhcccCCCCCCchhhccCcccceeechHHHHHHHHccCCceEec
Confidence 8999999999999777765443221 345789999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeeccCCCHHHHHHHHHHHHhhhhHHHHhhcchhhhcccCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 006639 468 LPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCI 547 (637)
Q Consensus 468 ~~~~~~~~g~aP~tl~~~~~QR~RWa~G~~qil~~~~~p~~~~~~~~L~~~qrl~yl~~~~~~~~~l~~l~~~l~P~l~L 547 (637)
+|+++++.|.+|+++.+.+.||+||++|.+|++++++||++.+..++|++.||++|+++++ |+.++++++|+++|++||
T Consensus 479 ~p~~~AFlG~aP~~l~~~L~Q~~RWa~G~lqI~fsr~nPl~~g~~~~L~l~QRLaYl~~~~-~~~sip~l~Y~~lP~l~L 557 (756)
T PLN02190 479 SPDPPAFLGSMPPGGPEAMVQQRRWATGLIEVLFNKQSPLIGMFCRKIRFRQRLAYLYVFT-CLRSIPELIYCLLPAYCL 557 (756)
T ss_pred CCCchhhcCcCCCChHHHhhhhhhHhhhhHHHHHhcCCCceeccCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 9878899999999999999999999999999999999999874458999999999999877 999999999999999999
Q ss_pred HhCCccccccCchhhHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeC
Q 006639 548 ITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEIT 627 (637)
Q Consensus 548 l~g~~i~p~~~~~~~~~l~~~fl~~~l~~ll~~~~~G~~~~~~w~~~~~w~i~~~~a~l~a~~~a~~~~l~~~~~~F~VT 627 (637)
++|.+++|.. +++.++++++++++++++++++|+|.++++|||+||+|+|.++++|++|++++++|+||+++.+|.||
T Consensus 558 l~g~~i~P~~--~~~~~~~~l~~~~~~~~l~E~~~sG~s~~~WWnnqr~w~I~~~sa~l~a~~~~~lK~lg~s~~~F~vT 635 (756)
T PLN02190 558 LHNSALFPKG--VYLGIIVTLVGMHCLYTLWEFMSLGFSVQSWYVSQSFWRIKATSSWLFSIQDIILKLLGISKTVFIVT 635 (756)
T ss_pred HcCCccccCc--cHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHhhhheEEeecchHHHHHHHHHHHHHhccccceEEEe
Confidence 9999999974 56667778888999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC
Q 006639 628 QKIH 631 (637)
Q Consensus 628 pKg~ 631 (637)
+|..
T Consensus 636 sK~~ 639 (756)
T PLN02190 636 KKTM 639 (756)
T ss_pred eccc
Confidence 9964
No 2
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit
Probab=100.00 E-value=5.9e-158 Score=1351.88 Aligned_cols=627 Identities=38% Similarity=0.651 Sum_probs=579.1
Q ss_pred CCCCCCceeeeeccch---HHHHHHHHHHHHHHHHHHHHhccccCch-hHHHHHHHHHHHHHHHHHHHHHheeccccCCC
Q 006639 5 KSSCLPLYEKVFHKNT---YHRALDVIILFLLLCLLFYRLSTLKNHG-FAWFLAFLCESCFTFIWILIVNCKWTPLTYKT 80 (637)
Q Consensus 5 ~~~~~~l~~~~~~~~~---~~r~~~~~~~~~~~~yl~wR~~~~~~~~-~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 80 (637)
.+.++|||+|++++++ .||+++++++++++++|+||+++..+.. ++|+++++||+||+|+|+|+|+.||+|++|.+
T Consensus 251 ~~~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R~t 330 (1079)
T PLN02638 251 DEARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPVRNAYALWLISVICEIWFALSWILDQFPKWLPVNRET 330 (1079)
T ss_pred ccCCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHHHHHHhcccccccccccc
Confidence 4678999999999999 4999999999999999999999987665 46999999999999999999999999999999
Q ss_pred Ccchhhccc------CCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhh
Q 006639 81 YPQRLQERI------QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAK 154 (637)
Q Consensus 81 ~~~~l~~~~------~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~ 154 (637)
|+++|+++. .+||+|||||||+||.||||.+|+|||+|+||+|||.+||+|||+|||++++|+++|.||++|||
T Consensus 331 ~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~ 410 (1079)
T PLN02638 331 YLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFAR 410 (1079)
T ss_pred CHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHHHH
Confidence 999998762 35999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhccccccCCCccCCCCC--CCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCC----cccccccc
Q 006639 155 LWVPFCKKYNVQIRAPFRYFPDSE--PSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGG----MTVFSNTE 228 (637)
Q Consensus 155 ~w~pfc~~~~v~~r~p~~yf~~~~--~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~----~~~~~~~~ 228 (637)
+||||||||+||||+||+||+.+. .+++..++|++||++||+||||||.|||.+.++....+++|+ +++|++.+
T Consensus 411 ~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g~~ 490 (1079)
T PLN02638 411 KWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPGNN 490 (1079)
T ss_pred hhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCCCC
Confidence 999999999999999999999753 567778899999999999999999999999877666554443 79999889
Q ss_pred ccCCCceEEEeecCCCCC---CCCCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHH
Q 006639 229 RMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVL 305 (637)
Q Consensus 229 ~~~~~~~~~v~~~~~~~~---~~~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~ 305 (637)
++|||+||||+++++++. +.++|+|+||+||||||++||+||||||+++|||+++||+|||+++||||++|||++|+
T Consensus 491 ~~dHp~IiqVll~~~~~~d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiNns~alr 570 (1079)
T PLN02638 491 TRDHPGMIQVFLGHSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALR 570 (1079)
T ss_pred CCCCHHHHHHHhcCCCccccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccCchHHHH
Confidence 999999999999987653 45799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCcEEEEeCCcccc-----Ccchh-hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhc--
Q 006639 306 QAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEH-- 377 (637)
Q Consensus 306 ~~v~~f~d~~~~~~va~VQtPq~f~-----D~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~-- 377 (637)
++||||+||+.++++||||+||+|+ |||+| +++||+++|+|+||+|||+||||||+|||+||||.+++....
T Consensus 571 ~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~~~~~~~ 650 (1079)
T PLN02638 571 EAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPIKPKHK 650 (1079)
T ss_pred HhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCCccccccc
Confidence 9999999999899999999999999 99999 999999999999999999999999999999999986543100
Q ss_pred -----------------------c--c---------------------------------cchHHHHHHhhCCcHHHHHH
Q 006639 378 -----------------------Q--G---------------------------------NIVEDELLKKFGNSKEFIKS 399 (637)
Q Consensus 378 -----------------------~--~---------------------------------~~~~~~~~~~~g~s~~~i~s 399 (637)
. . .++...+.++||+|..|+.|
T Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S 730 (1079)
T PLN02638 651 KPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQSAVFVAS 730 (1079)
T ss_pred ccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhccccHHHHHH
Confidence 0 0 01122466899999999999
Q ss_pred HHHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccC
Q 006639 400 AAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCAS 479 (637)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP 479 (637)
+....+|.+. +...++.+++|+.|++|+||++|+||+++||.|+|+|||+.||++||++|||++|++|+++++.|++|
T Consensus 731 ~~~~~~~~~~--~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP 808 (1079)
T PLN02638 731 TLMENGGVPQ--SATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAP 808 (1079)
T ss_pred HHHhhcCCCC--CCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchHhcCcCC
Confidence 9877766553 33456799999999999999999999999999999999999999999999999999877778999999
Q ss_pred CCHHHHHHHHHHHHhhhhHHHHhhcchhhhcccCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCccccccCc
Q 006639 480 PSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQE 559 (637)
Q Consensus 480 ~tl~~~~~QR~RWa~G~~qil~~~~~p~~~~~~~~L~~~qrl~yl~~~~~~~~~l~~l~~~l~P~l~Ll~g~~i~p~~~~ 559 (637)
+|+.+++.||+|||+|++|+++++++|++.++.++|++.||++|+++++||+.+++.++|+++|++||++|++++|.++.
T Consensus 809 ~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp~~sip~liY~llP~l~Ll~G~~i~P~vs~ 888 (1079)
T PLN02638 809 INLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPITSIPLLLYCTLPAVCLLTGKFIIPQISN 888 (1079)
T ss_pred CCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCccc
Confidence 99999999999999999999998899999765589999999999999999999999999999999999999999999888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCcC
Q 006639 560 PTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRS 633 (637)
Q Consensus 560 ~~~~~l~~~fl~~~l~~ll~~~~~G~~~~~~w~~~~~w~i~~~~a~l~a~~~a~~~~l~~~~~~F~VTpKg~~~ 633 (637)
+++++++++|++++++++++++|+|.++.+|||+||+|+|.++++++++++++++|+||+++.+|.||+|....
T Consensus 889 ~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~d~ 962 (1079)
T PLN02638 889 IASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDE 962 (1079)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceeccccccc
Confidence 88888889999999999999999999999999999999999999999999999999999999999999997644
No 3
>PLN02400 cellulose synthase
Probab=100.00 E-value=1.6e-157 Score=1348.87 Aligned_cols=627 Identities=37% Similarity=0.645 Sum_probs=577.8
Q ss_pred CCCCCCceeeeeccch---HHHHHHHHHHHHHHHHHHHHhccccCch-hHHHHHHHHHHHHHHHHHHHHHheeccccCCC
Q 006639 5 KSSCLPLYEKVFHKNT---YHRALDVIILFLLLCLLFYRLSTLKNHG-FAWFLAFLCESCFTFIWILIVNCKWTPLTYKT 80 (637)
Q Consensus 5 ~~~~~~l~~~~~~~~~---~~r~~~~~~~~~~~~yl~wR~~~~~~~~-~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 80 (637)
.+.++|||++++++++ .||+++++++++++++|+||+++..+.. ++|+++++||+||+|+|+|+|+.||+|++|.+
T Consensus 258 ~~~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t 337 (1085)
T PLN02400 258 DDARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVKDAYGLWLTSVICEIWFALSWLLDQFPKWYPINRET 337 (1085)
T ss_pred ccccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHHHHHHHHHHccCccccccccee
Confidence 3567899999999999 5999999999999999999999987765 45999999999999999999999999999999
Q ss_pred Ccchhhccc------CCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhh
Q 006639 81 YPQRLQERI------QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAK 154 (637)
Q Consensus 81 ~~~~l~~~~------~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~ 154 (637)
|+++|+++. .+||+|||||||+||.||||.+|+|||+|+||+|||.+||+|||+|||++++|+++|.||++|||
T Consensus 338 ~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~Al~Eaa~FA~ 417 (1085)
T PLN02400 338 YLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGSAMLTFEALSETAEFAR 417 (1085)
T ss_pred CHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHH
Confidence 999998762 35999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhccccccCCCccCCCCC--CCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCC----Ccccccccc
Q 006639 155 LWVPFCKKYNVQIRAPFRYFPDSE--PSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTG----GMTVFSNTE 228 (637)
Q Consensus 155 ~w~pfc~~~~v~~r~p~~yf~~~~--~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g----~~~~~~~~~ 228 (637)
+||||||||+||||+||+||+.+. .+++..++|++||++||+||||||.|||++.++....+.+| ++++|++.+
T Consensus 418 ~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~ 497 (1085)
T PLN02400 418 KWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQKIPEEGWTMQDGTPWPGNN 497 (1085)
T ss_pred hhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccccccCccCCCCC
Confidence 999999999999999999999754 45677899999999999999999999999986655554444 589999999
Q ss_pred ccCCCceEEEeecCCCCC---CCCCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHH
Q 006639 229 RMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVL 305 (637)
Q Consensus 229 ~~~~~~~~~v~~~~~~~~---~~~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~ 305 (637)
++|||+||||+++++++. +.++|+|+||+||||||++||+||||||+.+|||+++||+|||+++||||++|||++++
T Consensus 498 ~~dHp~iIqVll~~~~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~ILNlDCDmY~Nns~a~r 577 (1085)
T PLN02400 498 PRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKALK 577 (1085)
T ss_pred CCCCchhhhhhhcCCCCcccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCCceEEecccccccCCchhHH
Confidence 999999999999988752 56899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCcEEEEeCCcccc-----Ccchh-hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhcc-
Q 006639 306 QAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQ- 378 (637)
Q Consensus 306 ~~v~~f~d~~~~~~va~VQtPq~f~-----D~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~- 378 (637)
++||||+||+.++++||||+||+|+ |+|+| +++||++.+.|+||+|||+|+||||+|||+||||.+++..+.+
T Consensus 578 ~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC~frR~aLYG~~p~~~~~~~ 657 (1085)
T PLN02400 578 EAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPVLTEEDL 657 (1085)
T ss_pred hhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCcceeeeeeccCCCccccccc
Confidence 9999999999999999999999999 99999 9999999999999999999999999999999999866421000
Q ss_pred ------------------------------------------------------c---cchHHHHHHhhCCcHHHHHHHH
Q 006639 379 ------------------------------------------------------G---NIVEDELLKKFGNSKEFIKSAA 401 (637)
Q Consensus 379 ------------------------------------------------------~---~~~~~~~~~~~g~s~~~i~s~~ 401 (637)
+ .++..++.++||+|..|+.|+.
T Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~ 737 (1085)
T PLN02400 658 EPNIIVKSCCGSRKKGKGSKKYNIDKKRAMKRTESNVPIFNMEDIEEGVEGYDDERSLLMSQKSLEKRFGQSPVFIAATF 737 (1085)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhhhhhccccHHHHHHHH
Confidence 0 1234457789999999999987
Q ss_pred HhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCC
Q 006639 402 QTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPS 481 (637)
Q Consensus 402 ~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~t 481 (637)
.. +|... .+...++++++|++|++|+||++|.||+++||.|+++|||+.||++||++|||++|++|+++++.|++|+|
T Consensus 738 ~~-~~~~~-~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiYGSvTED~~TG~~LH~rGWrSvY~~p~r~af~GlAP~~ 815 (1085)
T PLN02400 738 ME-QGGIP-PSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPIN 815 (1085)
T ss_pred HH-hcCCC-CCCCcHHHHHHHHHhhccCCccCCchhhhhCeeccceechHHHHHHHHccCCceEecCCCcHhhcCcCCCC
Confidence 44 33222 23355679999999999999999999999999999999999999999999999999987778999999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHhhcchhhhcccCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCccccccCchh
Q 006639 482 GPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPT 561 (637)
Q Consensus 482 l~~~~~QR~RWa~G~~qil~~~~~p~~~~~~~~L~~~qrl~yl~~~~~~~~~l~~l~~~l~P~l~Ll~g~~i~p~~~~~~ 561 (637)
+.+++.||+|||+|++|++++++||+++++.++|++.||++|+++++||+.+++.++|+++|++||++|++++|.++.++
T Consensus 816 l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl~~~~y~~~slp~liY~llP~l~LltG~~i~P~vs~~~ 895 (1085)
T PLN02400 816 LSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYINTIVYPITSIPLLAYCVLPAFCLITNKFIIPEISNYA 895 (1085)
T ss_pred HHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCccchHH
Confidence 99999999999999999999989999976558999999999999999999999999999999999999999999988888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCcC
Q 006639 562 VLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRS 633 (637)
Q Consensus 562 ~~~l~~~fl~~~l~~ll~~~~~G~~~~~~w~~~~~w~i~~~~a~l~a~~~a~~~~l~~~~~~F~VTpKg~~~ 633 (637)
+++++++|++++++++++++|+|.++++|||+||+|+|.++++++++++++++|+||+++.+|.||+|...+
T Consensus 896 ~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvLgg~~~~F~VTsK~~d~ 967 (1085)
T PLN02400 896 SMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDE 967 (1085)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHHHHHHHHHHHHHHhcCCcccceecCCcccc
Confidence 888888999999999999999999999999999999999999999999999999999999999999997654
No 4
>PLN02436 cellulose synthase A
Probab=100.00 E-value=5.2e-157 Score=1339.16 Aligned_cols=627 Identities=36% Similarity=0.633 Sum_probs=575.0
Q ss_pred CCCCCCceeeeeccchH---HHHHHHHHHHHHHHHHHHHhccccCch-hHHHHHHHHHHHHHHHHHHHHHheeccccCCC
Q 006639 5 KSSCLPLYEKVFHKNTY---HRALDVIILFLLLCLLFYRLSTLKNHG-FAWFLAFLCESCFTFIWILIVNCKWTPLTYKT 80 (637)
Q Consensus 5 ~~~~~~l~~~~~~~~~~---~r~~~~~~~~~~~~yl~wR~~~~~~~~-~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 80 (637)
.+.++||++|+++++++ ||+++++++++++++|+||+++..+.. ++|+++++||+||+|+|+|+|+.||+|++|.+
T Consensus 267 ~~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R~t 346 (1094)
T PLN02436 267 DEGRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWILDQFPKWYPIERET 346 (1094)
T ss_pred cccCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHHHHHHHHHHccCccccccccee
Confidence 35688999999999995 999999999999999999999987765 45999999999999999999999999999999
Q ss_pred Ccchhhccc------CCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhh
Q 006639 81 YPQRLQERI------QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAK 154 (637)
Q Consensus 81 ~~~~l~~~~------~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~ 154 (637)
|+++|+++. .+||+|||||||+||.||||.+|+|||+|+||+|||.+||+|||+|||++++|+++|.||++|||
T Consensus 347 ~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk 426 (1094)
T PLN02436 347 YLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFAR 426 (1094)
T ss_pred CHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHH
Confidence 999998762 35999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhccccccCCCccCCCCC--CCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccC----CCcccccccc
Q 006639 155 LWVPFCKKYNVQIRAPFRYFPDSE--PSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLT----GGMTVFSNTE 228 (637)
Q Consensus 155 ~w~pfc~~~~v~~r~p~~yf~~~~--~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~----g~~~~~~~~~ 228 (637)
+||||||||+||||+||+||+.+. .+++..++|++||++||+||||||.|||++.++....... .++++|++.+
T Consensus 427 ~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g~~ 506 (1094)
T PLN02436 427 KWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPWPGNN 506 (1094)
T ss_pred hhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccCCCCC
Confidence 999999999999999999999754 4566688999999999999999999999998752221111 2368999999
Q ss_pred ccCCCceEEEeecCCCCC---CCCCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHH
Q 006639 229 RMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVL 305 (637)
Q Consensus 229 ~~~~~~~~~v~~~~~~~~---~~~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~ 305 (637)
++|||+||||+++++++. +.++|+|+||+||||||++||+||||||+.+|||+++||+|||+++||||++|||++++
T Consensus 507 ~~dHp~IIqVll~~~~~~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~r 586 (1094)
T PLN02436 507 VRDHPGMIQVFLGHSGVRDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKALR 586 (1094)
T ss_pred CCCCccceEEEecCCCCcccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccCchHHHH
Confidence 999999999999987543 56899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCcEEEEeCCcccc-----Ccchh-hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhc--
Q 006639 306 QAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEH-- 377 (637)
Q Consensus 306 ~~v~~f~d~~~~~~va~VQtPq~f~-----D~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~-- 377 (637)
++||||+||+.++++||||+||+|+ |+|+| +++||++.+.|+||+|||+|+||||+|||+||||.+++..+.
T Consensus 587 ~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~pp~~~~~~ 666 (1094)
T PLN02436 587 EAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAPKKKKPP 666 (1094)
T ss_pred HhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccCCccccccc
Confidence 9999999999999999999999999 99999 999999999999999999999999999999999987652100
Q ss_pred ----------------------------------------------------------cccchHHHHHHhhCCcHHHHHH
Q 006639 378 ----------------------------------------------------------QGNIVEDELLKKFGNSKEFIKS 399 (637)
Q Consensus 378 ----------------------------------------------------------~~~~~~~~~~~~~g~s~~~i~s 399 (637)
...++...+.++||+|..|+.|
T Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S 746 (1094)
T PLN02436 667 GKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFGQSPVFVAS 746 (1094)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhcccHHHHHH
Confidence 0012344567899999999999
Q ss_pred HHHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccC
Q 006639 400 AAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCAS 479 (637)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP 479 (637)
+.....|.+. ....++.+++|++|++|+||++|.||+++||.|+++|||+.||++||++|||++|++|+++++.|++|
T Consensus 747 ~~~~~~~~~~--~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~AF~GlAP 824 (1094)
T PLN02436 747 TLLENGGVPR--NASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAP 824 (1094)
T ss_pred HHHhhcCCCC--CCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCchhhcCcCC
Confidence 9877654332 22455789999999999999999999999999999999999999999999999999877778899999
Q ss_pred CCHHHHHHHHHHHHhhhhHHHHhhcchhhhcccCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCccccccCc
Q 006639 480 PSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQE 559 (637)
Q Consensus 480 ~tl~~~~~QR~RWa~G~~qil~~~~~p~~~~~~~~L~~~qrl~yl~~~~~~~~~l~~l~~~l~P~l~Ll~g~~i~p~~~~ 559 (637)
+|+.+++.||+|||+|++||++++++|++++..++|++.||++|+++++||+.+++.++|+++|++||++|++++|.++.
T Consensus 825 ~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~l~Slp~liY~~lP~l~LL~G~~i~P~vs~ 904 (1094)
T PLN02436 825 INLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYPWTSIPLIVYCTLPAICLLTGKFIVPEISN 904 (1094)
T ss_pred CCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCccch
Confidence 99999999999999999999999999999764578999999999999999999999999999999999999999999888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCcC
Q 006639 560 PTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRS 633 (637)
Q Consensus 560 ~~~~~l~~~fl~~~l~~ll~~~~~G~~~~~~w~~~~~w~i~~~~a~l~a~~~a~~~~l~~~~~~F~VTpKg~~~ 633 (637)
+++++++++|++++++++++++|+|.++++|||+||+|+|.++++++++++++++|+||+++.+|.||+|....
T Consensus 905 ~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~~d~ 978 (1094)
T PLN02436 905 YASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKAADD 978 (1094)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceeccccccc
Confidence 88888889999999999999999999999999999999999999999999999999999999999999997653
No 5
>PLN02195 cellulose synthase A
Probab=100.00 E-value=9.9e-157 Score=1332.55 Aligned_cols=627 Identities=37% Similarity=0.639 Sum_probs=576.3
Q ss_pred CCCCCCceeeeeccchH---HHHHHHHHHHHHHHHHHHHhccccCch-hHHHHHHHHHHHHHHHHHHHHHheeccccCCC
Q 006639 5 KSSCLPLYEKVFHKNTY---HRALDVIILFLLLCLLFYRLSTLKNHG-FAWFLAFLCESCFTFIWILIVNCKWTPLTYKT 80 (637)
Q Consensus 5 ~~~~~~l~~~~~~~~~~---~r~~~~~~~~~~~~yl~wR~~~~~~~~-~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 80 (637)
.|.++|||+|+++++++ ||+++++++++++++|+||+++..+.+ ++|+++++||+||+|+|+|+|+.||+|++|.+
T Consensus 154 ~~~~~pL~~~~~i~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~~~~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t 233 (977)
T PLN02195 154 ADAYEPLSRVIPIPRNKLTPYRAVIIMRLIILGLFFHYRITNPVDSAFGLWLTSVICEIWFAFSWVLDQFPKWSPINRET 233 (977)
T ss_pred ccccCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHHhcccccccccceE
Confidence 36778999999999995 999999999999999999999988776 48999999999999999999999999999999
Q ss_pred Ccchhhccc------CCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhh
Q 006639 81 YPQRLQERI------QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAK 154 (637)
Q Consensus 81 ~~~~l~~~~------~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~ 154 (637)
|+++|+++. .+||+|||||||+||.||||.+|+|||+|+||+|||.+||+|||+|||++++|+++|.||++|||
T Consensus 234 ~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FA~ 313 (977)
T PLN02195 234 YIDRLSARYEREGEPSQLAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLSFESLVETAEFAR 313 (977)
T ss_pred CHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHH
Confidence 999998762 45999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhccccccCCCccCCCCC--CCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccC----CCcccccccc
Q 006639 155 LWVPFCKKYNVQIRAPFRYFPDSE--PSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLT----GGMTVFSNTE 228 (637)
Q Consensus 155 ~w~pfc~~~~v~~r~p~~yf~~~~--~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~----g~~~~~~~~~ 228 (637)
+||||||||+||||+||+||+.+. .+++..|+|++||++||+||||||.|||++.+++...+.+ +++++|++.+
T Consensus 314 ~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~k~RIe~~~~~~~~~~~~~~~m~d~t~W~g~~ 393 (977)
T PLN02195 314 KWVPFCKKYSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEYKVRVNALVAKAQKTPEEGWTMQDGTPWPGNN 393 (977)
T ss_pred hhcccccccCCCcCCHHHHhccCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccCCccCCCCC
Confidence 999999999999999999999754 4466779999999999999999999999998774443322 4589999999
Q ss_pred ccCCCceEEEeecCCCCC---CCCCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHH
Q 006639 229 RMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVL 305 (637)
Q Consensus 229 ~~~~~~~~~v~~~~~~~~---~~~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~ 305 (637)
++|||+||||+++++++. +.++|+|+||+||||||++||+||||||+++++|+++||+|||+++||||++|+|++|+
T Consensus 394 ~~dHp~IIqVll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGamNallrvSavmTNap~il~lDcDmy~n~s~~lr 473 (977)
T PLN02195 394 TRDHPGMIQVFLGETGARDIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAVR 473 (977)
T ss_pred CCCCcchhhhhccCCCCcccccccCceeEEEeccCCCCCCcccccchhHHHHHHhhhccCCCeEEEecCccccCcHHHHH
Confidence 999999999999877643 56899999999999999999999999999999999999999999999999998889999
Q ss_pred HHHHHhhccCCCCcEEEEeCCcccc-----Ccchh-hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchh----
Q 006639 306 QAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQI---- 375 (637)
Q Consensus 306 ~~v~~f~d~~~~~~va~VQtPq~f~-----D~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~---- 375 (637)
++||||+||+.++++|||||||+|| |+|+| +++||+++|+|+||+|||+||||||+|||+||||..++..
T Consensus 474 ~AMCf~~D~~~g~~va~VQ~PQ~F~~i~~~D~y~~~~~~ffd~~~~g~dglqGP~YvGTGC~fRR~ALyG~~p~~~~~~~ 553 (977)
T PLN02195 474 EAMCFLMDPVVGRDVCYVQFPQRFDGIDRSDRYANRNVVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPSLPRLP 553 (977)
T ss_pred HHHhhccCcccCCeeEEEcCCcccCCCCCCCCCCcccceeeeeeeccccccCCccccccCceeeehhhhccCcccccccc
Confidence 9999999999899999999999999 99999 9999999999999999999999999999999999865431
Q ss_pred -----------------hcc--------------------------------ccchHHHHHHhhCCcHHHHHHHHHhhcC
Q 006639 376 -----------------EHQ--------------------------------GNIVEDELLKKFGNSKEFIKSAAQTLEG 406 (637)
Q Consensus 376 -----------------e~~--------------------------------~~~~~~~~~~~~g~s~~~i~s~~~~~~g 406 (637)
+.. ..+...++..+||+|.+|+.|+....+|
T Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~ 633 (977)
T PLN02195 554 KSSSSSSSCCCPTKKKPEQDPSEIYRDAKREDLNAAIFNLREIDNYDEYERSMLISQMSFEKTFGLSSVFIESTLMENGG 633 (977)
T ss_pred ccccccccccccccccccccchhhccccccccccccccccccccccchhhhhhhhhhhHHHHhhcccHHHHHHHHHHhcC
Confidence 000 0012235667999999999999777665
Q ss_pred CcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCCHHHHH
Q 006639 407 KTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGM 486 (637)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~ 486 (637)
.+.. ....+++++|+.|++|+||++|+||+++||.|+|+|||+.||++||++|||++|++|+++++.|++|+|+.+++
T Consensus 634 ~~~~--~~~~~~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rlH~rGWrSvY~~p~r~af~G~AP~~L~~~L 711 (977)
T PLN02195 634 VPES--ANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSIYCMPVRPAFKGSAPINLSDRL 711 (977)
T ss_pred CCCC--CCcHHHHHHHHhhhcccCccccchhhhcCeeccceecHHHHHHHHHccCCcEEecCCccHHhcccCCCCHHHHH
Confidence 5442 23456899999999999999999999999999999999999999999999999998877789999999999999
Q ss_pred HHHHHHHhhhhHHHHhhcchhhhccc-CCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCccccccCchhhHHH
Q 006639 487 RQQKRWATGLLEILFSKRNPILATLI-GKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIP 565 (637)
Q Consensus 487 ~QR~RWa~G~~qil~~~~~p~~~~~~-~~L~~~qrl~yl~~~~~~~~~l~~l~~~l~P~l~Ll~g~~i~p~~~~~~~~~l 565 (637)
.||+|||+|++|++++++||+++++. ++|++.||++|+++++||+.+++.++|+++|++||++|++++|.++.++++++
T Consensus 712 ~Qr~RWA~G~lqI~~sr~nPl~~g~~~~~L~~~QRL~Yl~~~ly~~~slp~liY~~lP~l~Ll~G~~i~P~vs~~~~~~f 791 (977)
T PLN02195 712 HQVLRWALGSVEIFLSRHCPLWYGYGGGRLKWLQRLAYINTIVYPFTSLPLIAYCTLPAICLLTGKFIIPTLSNLASMLF 791 (977)
T ss_pred HHHHHHHhchhhhhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeecccchHHHHHHH
Confidence 99999999999999988999997542 78999999999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHhCCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCcC
Q 006639 566 LALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRS 633 (637)
Q Consensus 566 ~~~fl~~~l~~ll~~~~~G~~~~~~w~~~~~w~i~~~~a~l~a~~~a~~~~l~~~~~~F~VTpKg~~~ 633 (637)
+++|++++++++++++|+|.++++|||+||+|+|.++++++++++++++|+||+++.+|.||+|....
T Consensus 792 ~~lfl~~~~~~~lE~~~sG~si~~WWrnqq~w~I~~tSa~Lfavl~~llKvLggs~~~F~VTsK~~dd 859 (977)
T PLN02195 792 LGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGLDTNFTVTAKAADD 859 (977)
T ss_pred HHHHHHHHHHHHHHHHhcccCHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHcCCCccceeccccccc
Confidence 89999999999999999999999999999999999999999999999999999999999999997654
No 6
>PLN02189 cellulose synthase
Probab=100.00 E-value=2e-156 Score=1335.98 Aligned_cols=630 Identities=38% Similarity=0.635 Sum_probs=577.2
Q ss_pred CCCCCCCCceeeeeccchH---HHHHHHHHHHHHHHHHHHHhccccCc-hhHHHHHHHHHHHHHHHHHHHHHheeccccC
Q 006639 3 NTKSSCLPLYEKVFHKNTY---HRALDVIILFLLLCLLFYRLSTLKNH-GFAWFLAFLCESCFTFIWILIVNCKWTPLTY 78 (637)
Q Consensus 3 ~~~~~~~~l~~~~~~~~~~---~r~~~~~~~~~~~~yl~wR~~~~~~~-~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r 78 (637)
+..+.++|||+|+++++++ ||+++++++++++++|+||+++..+. .++|+++++||+||+|+|+|+|+.||+|++|
T Consensus 231 ~~~~~~~pL~~~~~~~~~~~~pyR~~~~~~l~~l~~~l~yRi~~~~~~~~~~W~~s~~~E~wFaf~Wll~q~~kw~Pv~R 310 (1040)
T PLN02189 231 LIDEARQPLSRKVPIASSKVNPYRMVIVARLVVLAFFLRYRILHPVHDAIGLWLTSIICEIWFAVSWILDQFPKWFPIDR 310 (1040)
T ss_pred hcccCCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhcCcCccchHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence 4456789999999999995 99999999999999999999998754 4679999999999999999999999999999
Q ss_pred CCCcchhhccc---C---CCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhh
Q 006639 79 KTYPQRLQERI---Q---ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKF 152 (637)
Q Consensus 79 ~~~~~~l~~~~---~---~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~f 152 (637)
.+|+++|+++. + +||+|||||||+||.||||.+|+|||+|+||+|||.+||+|||+|||++++|+++|.||++|
T Consensus 311 ~t~~drL~~r~~~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F 390 (1040)
T PLN02189 311 ETYLDRLSLRYEREGEPNMLSPVDIFVSTVDPLKEPPLVTANTVLSILAMDYPVDKISCYVSDDGASMLTFEALSETAEF 390 (1040)
T ss_pred eeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence 99999998762 2 39999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhccccccCCCccCCCCC--CCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCC----Ccccccc
Q 006639 153 AKLWVPFCKKYNVQIRAPFRYFPDSE--PSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTG----GMTVFSN 226 (637)
Q Consensus 153 a~~w~pfc~~~~v~~r~p~~yf~~~~--~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g----~~~~~~~ 226 (637)
||+||||||||+||||+||+||+.+. .+++..++|++||++||+||||||.||+.+.++....+++| ++++|++
T Consensus 391 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~~K~eYEe~kvRI~~l~a~~~~~p~~~~~m~dGt~W~g 470 (1040)
T PLN02189 391 ARKWVPFCKKFSIEPRAPEFYFSLKVDYLKDKVQPTFVKERRAMKREYEEFKVRINAIVAKAQKVPPEGWIMQDGTPWPG 470 (1040)
T ss_pred HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCccCCccceeccCccCCC
Confidence 99999999999999999999999753 56777889999999999999999999999987666655444 3589998
Q ss_pred ccccCCCceEEEeecCCCCC---CCCCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHH
Q 006639 227 TERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEI 303 (637)
Q Consensus 227 ~~~~~~~~~~~v~~~~~~~~---~~~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~ 303 (637)
.+++|||+||||+++++++. +.++|+|+||+||||||++||+||||||+++|||+++||+|||+++||||++|+|++
T Consensus 471 ~~~~dHp~IiQVll~~~~~~d~~g~~lP~LVYVSREKrPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmY~Nns~a 550 (1040)
T PLN02189 471 NNTRDHPGMIQVFLGHSGGHDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNAPFMLNLDCDHYINNSKA 550 (1040)
T ss_pred CCCCCCHHHHHHHhcCCCCccccccccceeEEEeccCCCCCCcccchhhHHHHHHHhhhccCCCeEEEccCccccCchHH
Confidence 89999999999999987652 568999999999999999999999999999999999999999999999999989999
Q ss_pred HHHHHHHhhccCCCCcEEEEeCCcccc-----Ccchh-hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhh-
Q 006639 304 VLQAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIE- 376 (637)
Q Consensus 304 L~~~v~~f~d~~~~~~va~VQtPq~f~-----D~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e- 376 (637)
|+++||||+||+.++++|||||||+|+ |||+| +++||+++|+|+||+|||+||||||+|||+||||..++...
T Consensus 551 lr~AMCfflDp~~g~~vAfVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALyG~~p~~~~~ 630 (1040)
T PLN02189 551 VREAMCFLMDPQIGRKVCYVQFPQRFDGIDTHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFRRQALYGYDPPKGPK 630 (1040)
T ss_pred HHHhhhhhcCCccCceeEEEeCccccCCCCCCCccCCccceeeeeeecccccCCCccccccCceeeeeeeeccCcccccc
Confidence 999999999999899999999999999 99999 99999999999999999999999999999999998664210
Q ss_pred --------------------------------------ccccchHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhh
Q 006639 377 --------------------------------------HQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRS 418 (637)
Q Consensus 377 --------------------------------------~~~~~~~~~~~~~~g~s~~~i~s~~~~~~g~~~~~~~~~~~~ 418 (637)
.......+++.++||+|.+|+.|+.....+... .....++
T Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~--~~~~~~~ 708 (1040)
T PLN02189 631 RPKMVTCDCCPCFGRRKKKHAKNGLNGEVAALGGMESDKEMLMSQMNFEKKFGQSAIFVTSTLMEEGGVPP--SSSPAAL 708 (1040)
T ss_pred cccccccchhhhcccccccccccccccccccccccchhhhhhhhhhhhHhhhccchhhhhhhhhhhcCCCC--CCCcHHH
Confidence 000122345667999999999998766433221 2244568
Q ss_pred HHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCCHHHHHHHHHHHHhhhhH
Q 006639 419 LDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLE 498 (637)
Q Consensus 419 ~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~QR~RWa~G~~q 498 (637)
+++|++|++|+||++|+||+++||.|+++|||+.||++||++|||++|++|+++++.|++|+|+.+++.||+||++|++|
T Consensus 709 l~eA~~V~sC~YE~~T~WG~evGw~YGSvTED~~TG~rlH~rGWrSvY~~p~r~AF~GlAP~~L~~~L~Qr~RWA~G~lq 788 (1040)
T PLN02189 709 LKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRAAFKGSAPINLSDRLNQVLRWALGSVE 788 (1040)
T ss_pred HHHHHHhhccccccCCchhhccCeeccccccHHHHHHHHHccCCceEecCCCcHHhcCcCCCCHHHHHHHHHHHhhhhHH
Confidence 99999999999999999999999999999999999999999999999998778899999999999999999999999999
Q ss_pred HHHhhcchhhhcc-cCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCccccccCchhhHHHHHHHHHHHHHHH
Q 006639 499 ILFSKRNPILATL-IGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTL 577 (637)
Q Consensus 499 il~~~~~p~~~~~-~~~L~~~qrl~yl~~~~~~~~~l~~l~~~l~P~l~Ll~g~~i~p~~~~~~~~~l~~~fl~~~l~~l 577 (637)
++++++||++.++ .++|++.||++|+++++||+.+++.++|+++|++||++|++++|.++.+++++++.+|++++++.+
T Consensus 789 I~~sr~nPl~~g~~~~~L~l~QRL~Yl~~~ly~~~sip~liY~~lP~l~Ll~g~~i~p~vs~~~~~~fi~lf~~~~~~~l 868 (1040)
T PLN02189 789 IFFSRHSPLLYGYKGGNLKWLERFAYVNTTIYPFTSLPLLAYCTLPAICLLTGKFIMPPISTFASLFFIALFMSIFATGI 868 (1040)
T ss_pred HhhccCCccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCccchHHHHHHHHHHHHHHHHHH
Confidence 9999999999754 267999999999999999999999999999999999999999999888888888889999999999
Q ss_pred HHHHHhCCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCcCc
Q 006639 578 LEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQ 634 (637)
Q Consensus 578 l~~~~~G~~~~~~w~~~~~w~i~~~~a~l~a~~~a~~~~l~~~~~~F~VTpKg~~~~ 634 (637)
++++|+|.++++|||+||+|+|.++++++++++++++|+||+++.+|.||+|...++
T Consensus 869 lE~~~sG~s~~~WWrnQq~w~I~~~Sa~Lfavl~~ilKvlggs~~~F~VTsK~~~d~ 925 (1040)
T PLN02189 869 LELRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATDDD 925 (1040)
T ss_pred HHHHhcCCcHHHHhhhhhHHHHhhhHHHHHHHHHHHHHHhccCcccceecccccccc
Confidence 999999999999999999999999999999999999999999999999999976543
No 7
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit
Probab=100.00 E-value=5e-156 Score=1332.96 Aligned_cols=627 Identities=38% Similarity=0.646 Sum_probs=573.2
Q ss_pred CCCCCCceeeeeccchH---HHHHHHHHHHHHHHHHHHHhccccCch-hHHHHHHHHHHHHHHHHHHHHHheeccccCCC
Q 006639 5 KSSCLPLYEKVFHKNTY---HRALDVIILFLLLCLLFYRLSTLKNHG-FAWFLAFLCESCFTFIWILIVNCKWTPLTYKT 80 (637)
Q Consensus 5 ~~~~~~l~~~~~~~~~~---~r~~~~~~~~~~~~yl~wR~~~~~~~~-~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 80 (637)
.+.++||++++++++++ ||+++++++++++++|+||+++..+.. ++|+++++||+||+|+|+|+|++||+|++|.+
T Consensus 189 ~~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~a~~~Wl~s~~cE~wFaf~Wll~q~~Kw~Pv~R~t 268 (1044)
T PLN02915 189 AEARQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILTPAYDAYPLWLISVICEIWFALSWILDQFPKWFPINRET 268 (1044)
T ss_pred cccCCCceEEEecCcccchhHHHHHHHHHHHHHHHHHHHhcCcCCCchHHHHHHHHHHHHHHHHHHHccCcccccccccc
Confidence 56689999999999995 999999999999999999999955444 46999999999999999999999999999999
Q ss_pred Ccchhhcc---c---CCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhh
Q 006639 81 YPQRLQER---I---QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAK 154 (637)
Q Consensus 81 ~~~~l~~~---~---~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~ 154 (637)
|+++|+.+ + .+||+|||||||+||.||||.+|+|||+|+||+|||.+||+|||+|||++++|+++|.||++|||
T Consensus 269 ~~drL~~r~e~~~~~~~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk 348 (1044)
T PLN02915 269 YLDRLSMRFERDGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFAR 348 (1044)
T ss_pred CHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceeEEEecCCchHhHHHHHHHHHHHHH
Confidence 99999865 2 24999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhccccccCCCccCCCCC--CCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCC----Ccccccccc
Q 006639 155 LWVPFCKKYNVQIRAPFRYFPDSE--PSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTG----GMTVFSNTE 228 (637)
Q Consensus 155 ~w~pfc~~~~v~~r~p~~yf~~~~--~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g----~~~~~~~~~ 228 (637)
+||||||||+||||+||+||+.+. .+++..++|++||++||+||||||.|||++.+++...+..| ++++|++.+
T Consensus 349 ~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~~~~~~~~m~dgt~W~g~~ 428 (1044)
T PLN02915 349 RWVPFCKKHNIEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNN 428 (1044)
T ss_pred hhcchhhhcCCCcCCHHHHhccCCCccccccCchhHHHHHHHHHHHHHHHHHHHHHHhhhccCCcccccccCCccCCCCC
Confidence 999999999999999999999753 45666789999999999999999999999998754444344 589999888
Q ss_pred ccCCCceEEEeecCCCCC---CCCCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHH
Q 006639 229 RMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVL 305 (637)
Q Consensus 229 ~~~~~~~~~v~~~~~~~~---~~~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~ 305 (637)
.+|||+||||+++++++. +.++|+|+||+||||||++||+||||||+.+|||+++||+|||+++||||++|||++++
T Consensus 429 ~~dHp~IIqVll~~~~~~d~~g~~lP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNaP~iLNlDCDmY~Nns~a~r 508 (1044)
T PLN02915 429 TRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVR 508 (1044)
T ss_pred CCCCccceEEeecCCCCcccccCccceeEEEecccCCCCCcchhhhhhhhHhhhhheeecCcEEEeeccccccCcchhhH
Confidence 899999999999987652 56899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCcEEEEeCCcccc-----Ccchh-hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhcc-
Q 006639 306 QAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQ- 378 (637)
Q Consensus 306 ~~v~~f~d~~~~~~va~VQtPq~f~-----D~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~- 378 (637)
++||||+||+.++++||||+||+|+ |+|+| +++||++.+.|+||+|||+|+||||+|||+||||.+++..+..
T Consensus 509 ~AMCf~lD~~~g~~~afVQFPQrF~gidk~D~Y~n~~~Vffdi~~~GldGlqGP~YvGTGCffrR~aLYG~~pp~~~~~~ 588 (1044)
T PLN02915 509 EAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRP 588 (1044)
T ss_pred hhceeeecCCCCCeeEEEeCCcccCCCCCCCCcCccceEEEeeecccccccCCcccccCCceeeeeeecCcCCccccccc
Confidence 9999999999999999999999999 99999 9999999999999999999999999999999999876531100
Q ss_pred --------------------------------------------------------------------------------
Q 006639 379 -------------------------------------------------------------------------------- 378 (637)
Q Consensus 379 -------------------------------------------------------------------------------- 378 (637)
T Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (1044)
T PLN02915 589 KMTCDCWPSWCCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLEEIEEGLEGYD 668 (1044)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence
Q ss_pred -----ccchHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHH
Q 006639 379 -----GNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLT 453 (637)
Q Consensus 379 -----~~~~~~~~~~~~g~s~~~i~s~~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~t 453 (637)
..+....+.++||+|..|+.|+....+|.+. +...++++++|++|++|+||++|+||+++||.|+|+|||+.|
T Consensus 669 ~~~~~~~~~~~~~~~~fG~S~~fi~S~~~~~~~~~~--~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~T 746 (1044)
T PLN02915 669 ELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGGLPE--GTNPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILT 746 (1044)
T ss_pred chhhhhhhhhhhhhhhcCCcHHHHHHHHHhhcCCCC--CCCcHHHHHHHHhccccCCCccCchhHhhCccccccccHHHH
Confidence 0012334667999999999999775544332 334557899999999999999999999999999999999999
Q ss_pred HHHHHhCCCeEEEeCCCCceeeeccCCCHHHHHHHHHHHHhhhhHHHHhhcchhhhcccCCCcHHHHHHHHHHHHHHhhH
Q 006639 454 GLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRS 533 (637)
Q Consensus 454 s~rl~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~QR~RWa~G~~qil~~~~~p~~~~~~~~L~~~qrl~yl~~~~~~~~~ 533 (637)
|++||++|||++|++|+++++.|++|+|+.++++||+||++|++|+++++++|++++..++|++.||++|+++++||+.+
T Consensus 747 G~rLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lqIf~sr~~Pl~~g~~~~L~l~QRL~Yl~~~~yp~~s 826 (1044)
T PLN02915 747 GFKMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTIVYPFTS 826 (1044)
T ss_pred HHHHHccCCcEEeeCCCcHHhcCcCCCCHHHHHHHHHHHhhhHHHHHHhccCCcccccCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999887788899999999999999999999999999998999997545899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCccccccCchhhHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhhhHHHHHHHHHHHHHHHHHH
Q 006639 534 IPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAA 613 (637)
Q Consensus 534 l~~l~~~l~P~l~Ll~g~~i~p~~~~~~~~~l~~~fl~~~l~~ll~~~~~G~~~~~~w~~~~~w~i~~~~a~l~a~~~a~ 613 (637)
++.++|+++|++||++|++++|.++....++++++|++++++++++++|+|.++++||++|++|+|.+++++++++++++
T Consensus 827 lp~liY~llP~l~LLtG~~i~P~~s~~~~~~f~~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~i 906 (1044)
T PLN02915 827 IPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGL 906 (1044)
T ss_pred HHHHHHHHHHHHHHHcCCcccCccchHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998766666667788899999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCeeeCcCCCcC
Q 006639 614 LEQFGFSEAVFEITQKIHRS 633 (637)
Q Consensus 614 ~~~l~~~~~~F~VTpKg~~~ 633 (637)
+|+||+++.+|+||+|....
T Consensus 907 LKvLg~se~~F~VTsK~~d~ 926 (1044)
T PLN02915 907 LKVLGGVDTNFTVTSKAADD 926 (1044)
T ss_pred HHHhcccCCcceecCCcccc
Confidence 99999999999999998643
No 8
>PLN02248 cellulose synthase-like protein
Probab=100.00 E-value=2.3e-152 Score=1304.14 Aligned_cols=626 Identities=35% Similarity=0.585 Sum_probs=554.2
Q ss_pred CCCCCCceeeeeccchH---HHHHHHHHHHHHHHHHHHHhccccCc-hhHHHHHHHHHHHHHHHHHHHHHheeccccCCC
Q 006639 5 KSSCLPLYEKVFHKNTY---HRALDVIILFLLLCLLFYRLSTLKNH-GFAWFLAFLCESCFTFIWILIVNCKWTPLTYKT 80 (637)
Q Consensus 5 ~~~~~~l~~~~~~~~~~---~r~~~~~~~~~~~~yl~wR~~~~~~~-~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~ 80 (637)
.+.++||++|+++++++ ||+++++++++++++|+||+++.... .++|+++++||+||+|+|+|+|+.||+|++|.+
T Consensus 264 ~~~~~pL~~~~~i~~~il~pyRl~~~~rlv~l~~fl~~Ri~~~~~~~~~~W~~s~~cE~WFaf~Wll~q~~Kw~Pv~R~t 343 (1135)
T PLN02248 264 DKPWRPLTRKVKISAAILSPYRLLILIRLVVLGLFLTWRVRNPNEDAMWLWGMSVVCEIWFAFSWLLDQLPKLCPINRAT 343 (1135)
T ss_pred ccCCCCceeeeecCcccccHHHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHHhcccccccccccc
Confidence 35678999999999995 99999999999999999999995423 368999999999999999999999999999999
Q ss_pred Ccchhhccc-----------CCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHH
Q 006639 81 YPQRLQERI-----------QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEA 149 (637)
Q Consensus 81 ~~~~l~~~~-----------~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea 149 (637)
++++|.++. .+||+|||||||+||+||||.+|+|||+|+||+|||.+||.|||+|||++.+|+++|.||
T Consensus 344 ~~~rL~~r~e~~~~~~p~g~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKLacYvSDDGgS~LTf~AL~EA 423 (1135)
T PLN02248 344 DLAVLKEKFETPSPSNPTGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEAMAEA 423 (1135)
T ss_pred CHHHHHHHhccccccCCCCcccCCcceeEeecCCCccCcchHHHHHHHHHhcccccccceeEEEecCCchHHHHHHHHHH
Confidence 999998763 369999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhhhhhccccccCCCccCCCCC--CCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhcccc------------
Q 006639 150 SKFAKLWVPFCKKYNVQIRAPFRYFPDSE--PSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLF------------ 215 (637)
Q Consensus 150 ~~fa~~w~pfc~~~~v~~r~p~~yf~~~~--~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~------------ 215 (637)
++|||+||||||||+||||+||+||+.+. .+++..++|++||++||+||||||.|||.+.+....+
T Consensus 424 a~FA~~WVPFCrKh~IepRaPe~YFs~~~~~~~~~~~~~F~~d~r~~KreYee~K~RIe~l~~~~~~rs~~~n~~~e~~~ 503 (1135)
T PLN02248 424 ASFARIWVPFCRKHDIEPRNPESYFSLKRDPTKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYNAREEIKA 503 (1135)
T ss_pred HHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCccchhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccchhHHHHh
Confidence 99999999999999999999999999754 4566678999999999999999999999986421110
Q ss_pred -----cc-CCC---------------cc----ccc----cccccCCCceEEEeecCCCC----------C-------CCC
Q 006639 216 -----DL-TGG---------------MT----VFS----NTERMNHPTIVKVISENKGG----------L-------SDE 249 (637)
Q Consensus 216 -----~~-~g~---------------~~----~~~----~~~~~~~~~~~~v~~~~~~~----------~-------~~~ 249 (637)
+. .++ .+ +|. +++++|||+||||++++++. . +.+
T Consensus 504 ~~~~~~~~~~~~~e~~~~~~~~wm~dgt~wpg~W~~~~~~~~~~dH~~IIqVll~~p~~e~~~g~~~~~~~~d~~~~d~~ 583 (1135)
T PLN02248 504 KKKQRESGGGDPSEPLKVPKATWMADGTHWPGTWLSSAPDHSRGDHAGIIQVMLKPPSDEPLMGSADDENLIDFTDVDIR 583 (1135)
T ss_pred hhhhhhhcccccccccccccceeeccCCcCCCcccCcccCCCCCCCcceeEEeccCCCcccccCcccccccccccccccc
Confidence 00 010 13 342 57899999999999986541 0 237
Q ss_pred CCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccc
Q 006639 250 IPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYF 329 (637)
Q Consensus 250 ~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f 329 (637)
+|+|+||+||||||++||+||||||+.+|||+++||+|||+++||||++|+|++|+++||||+|++ ++++||||+||+|
T Consensus 584 lP~LVYVSREKRPg~~Hh~KAGAMNALlRVSavmTNgPfILNLDCDmYiNns~alr~AMCf~lD~~-g~~vAfVQFPQrF 662 (1135)
T PLN02248 584 LPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSLAIREGMCFMMDRG-GDRICYVQFPQRF 662 (1135)
T ss_pred cceeEEEecccCCCCCcccccchhhhHHHhhhhccCCCeEEEeccCcccCCchhHHhcchheecCC-CCceEEEcCCccc
Confidence 999999999999999999999999999999999999999999999999999999999999999997 8999999999999
Q ss_pred c-----Ccchh-hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhccc------------------------
Q 006639 330 Y-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQG------------------------ 379 (637)
Q Consensus 330 ~-----D~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~------------------------ 379 (637)
+ |||+| +++||+++|+|+||+|||+||||||+|||+||||..++..++..
T Consensus 663 ~~I~k~D~Ygn~~~Vffdi~~~GlDGlqGP~YvGTGCffRR~ALYG~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (1135)
T PLN02248 663 EGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRAKEHSGCFGSCKFTKKKKKETSASEPEEQ 742 (1135)
T ss_pred CCCCCCCccCCcceeeeeeeeccccccCCccccccCceeeehhhcCcCCccccccccccccccccccccccccccccccc
Confidence 9 99999 99999999999999999999999999999999998776431000
Q ss_pred -------cchHHHHHHhhCCcHHHHHHHHHhh-cCCcCCC----------C-------CchhhhHHHHhHhhcccccccc
Q 006639 380 -------NIVEDELLKKFGNSKEFIKSAAQTL-EGKTGGY----------S-------SNISRSLDEAHRVADCGYEYGS 434 (637)
Q Consensus 380 -------~~~~~~~~~~~g~s~~~i~s~~~~~-~g~~~~~----------~-------~~~~~~~~~~~~vg~c~ye~~t 434 (637)
..+...+.++||+|..|+.|+..+. ++.+... + ....+++++|+.|++|+||++|
T Consensus 743 ~~~~~~~~~~~~~~~~rfG~S~~fi~S~~~a~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~eA~~V~sC~YE~~T 822 (1135)
T PLN02248 743 PDLEDDDDLELSLLPKRFGNSTMFAASIPVAEFQGRPLADHPSVKNGRPPGALTVPREPLDAATVAEAISVISCWYEDKT 822 (1135)
T ss_pred ccccccchhhhhhhhhhhccchhhhhhhHHHhhcccccccccccccccccccccccccCCcHHHHHHHHhhcccccccCC
Confidence 0122344569999999999986554 3332210 0 1123578999999999999999
Q ss_pred cccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCCHHHHHHHHHHHHhhhhHHHHhhcchhhhcccCC
Q 006639 435 SWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGK 514 (637)
Q Consensus 435 ~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~QR~RWa~G~~qil~~~~~p~~~~~~~~ 514 (637)
+||+++||.|+|+|||+.||++||++|||++|++|+++++.|++|+|+.++++||+|||+|++||++++++|++.+ ++
T Consensus 823 ~WG~evG~~YGSvTEDv~TGlrLH~rGWrSvY~~p~r~AF~GlAP~~L~d~L~Qr~RWA~G~lQIf~sr~~Pll~~--~~ 900 (1135)
T PLN02248 823 EWGDRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLAS--RR 900 (1135)
T ss_pred chhhhcCeeecceechHHHHHHHHhcCCceEeCCCChHhhcCCCCCCHHHHHHHHHHHhhchHHHHhccCCccccC--CC
Confidence 9999999999999999999999999999999998777889999999999999999999999999999989999875 79
Q ss_pred CcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCccccccCchhhHHHH-HHHHHHHHHHHHHHHHhCCcchhhhhh
Q 006639 515 LQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPL-ALFLIYKLYTLLEYIQAGLSIRSWWVN 593 (637)
Q Consensus 515 L~~~qrl~yl~~~~~~~~~l~~l~~~l~P~l~Ll~g~~i~p~~~~~~~~~l~-~~fl~~~l~~ll~~~~~G~~~~~~w~~ 593 (637)
|++.||++|+++++||+.+++.++|+++|++||++|++++|.. ..++++++ .+++.++++.+++++|+|.++++||++
T Consensus 901 Lsl~QRL~Yl~~~lypf~Slp~liY~llP~l~LLtGi~~~p~~-~~~fl~yll~l~l~~~~~sllE~~wsGvsl~~WWrn 979 (1135)
T PLN02248 901 LKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTL-NVTFLVYLLIITITLCLLAVLEIKWSGITLEEWWRN 979 (1135)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccc-cHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHhhh
Confidence 9999999999999999999999999999999999999999975 44555444 445778889999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCcCc
Q 006639 594 NCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQ 634 (637)
Q Consensus 594 ~~~w~i~~~~a~l~a~~~a~~~~l~~~~~~F~VTpKg~~~~ 634 (637)
||+|+|.++++|+++++++++|+|++++.+|.||+|....+
T Consensus 980 Qq~W~I~~tSA~L~A~l~aiLKvLggs~~~F~VTsK~~~~d 1020 (1135)
T PLN02248 980 EQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDD 1020 (1135)
T ss_pred hheeeehhhHHHHHHHHHHHHHHhcCccccceeCCcccccc
Confidence 99999999999999999999999999999999999987654
No 9
>PLN02893 Cellulose synthase-like protein
Probab=100.00 E-value=2.9e-150 Score=1264.10 Aligned_cols=605 Identities=33% Similarity=0.588 Sum_probs=548.1
Q ss_pred CCCCCCCCCCceeeeeccch-HHHHHHHHHHHHHHHHHHHHhccccCch--hHHHHHHHHHHHHHHHHHHHHHheecccc
Q 006639 1 MANTKSSCLPLYEKVFHKNT-YHRALDVIILFLLLCLLFYRLSTLKNHG--FAWFLAFLCESCFTFIWILIVNCKWTPLT 77 (637)
Q Consensus 1 ~~~~~~~~~~l~~~~~~~~~-~~r~~~~~~~~~~~~yl~wR~~~~~~~~--~~w~~~~~~E~~~~~~~~l~~~~~~~p~~ 77 (637)
++..+...+||||+++++++ .+|+++++++++++.+|+||+++.+..+ +.|+++++||+||+|+|+++|+.||+|++
T Consensus 4 ~~~~~~~~~pL~~~~~~~~~~~~R~~~~~~~~~i~~ll~~r~~~~~~~~~~~~w~~~~~~e~wf~f~W~l~q~~k~~Pv~ 83 (734)
T PLN02893 4 HTTASTGAPPLHTCHPMRRTIANRVFAVVYSCAILALLYHHVIALLHSTTTLITLLLLLADIVLAFMWATTQAFRMCPVH 83 (734)
T ss_pred cccCCCCCCCceeeeecCCchHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHccCccccccc
Confidence 34567788999999999999 4999999999999999999998887654 58999999999999999999999999999
Q ss_pred CCCCcchhhcc--cCCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhh
Q 006639 78 YKTYPQRLQER--IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKL 155 (637)
Q Consensus 78 r~~~~~~l~~~--~~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~ 155 (637)
|.+++++|+++ .+++|+|||||||+||.||||.+|+|||+|+||.|||.+|++|||+|||+++.|+++|.||++|||+
T Consensus 84 r~~~~~~L~~~~~~~~lP~vDvfv~TaDP~~Epp~~~~ntvLSilA~dyp~~kls~YvSDDGgs~lt~~al~Eaa~FA~~ 163 (734)
T PLN02893 84 RRVFIEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATH 163 (734)
T ss_pred cccCHHHHhhhcccccCCcceeeeccCCcccCchHHHHHHHHHHHhhccCccceEEEEecCCccHHHHHHHHHHHHHHHh
Confidence 99999999865 3579999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhccccccCCCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccc-------cccCCCccccc-cc
Q 006639 156 WVPFCKKYNVQIRAPFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSL-------FDLTGGMTVFS-NT 227 (637)
Q Consensus 156 w~pfc~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~-------~~~~g~~~~~~-~~ 227 (637)
||||||||||||||||+||+.+ .+++.+||++||+||||||.|||++.++... .++.++|++|. ++
T Consensus 164 WvPFCrk~~ie~R~P~~YF~~~------~~~~~~e~~~~k~~Yee~k~ri~~~~~~~~~~~~~~~~~~~~~~f~~w~~~~ 237 (734)
T PLN02893 164 WLPFCKKNKIVERCPEAYFSSN------SHSWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKF 237 (734)
T ss_pred hcccccccCCCcCCHHHHhccC------CCccchHHHHHHHHHHHHHHHHHHHHhcCcCchhhhhhcccccccccCcCCC
Confidence 9999999999999999999865 2467889999999999999999999753222 22345689996 78
Q ss_pred cccCCCceEEEeecCCCCC---CCCCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHH
Q 006639 228 ERMNHPTIVKVISENKGGL---SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIV 304 (637)
Q Consensus 228 ~~~~~~~~~~v~~~~~~~~---~~~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L 304 (637)
+++|||+||||+++++++. +.++|+|+|++||||||++||+||||||+++++|+++||||||+++||||++|+|++|
T Consensus 238 ~~~dH~~ivqV~l~~~~~~d~~g~~lP~lvYvsReKrp~~~Hh~KAGaLN~llrvS~~~TngpfIl~lDcD~y~n~p~~l 317 (734)
T PLN02893 238 TRQDHPTVIQVLLESGKDKDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAPIILTLDCDMYSNDPQTP 317 (734)
T ss_pred CCCCCCceeeeeccCCCccchhhccCCceEEEeCCCCCCCCcccccchHHHHHHhhcccCCCCEEEEecCCcCCCchhHH
Confidence 9999999999999987543 4679999999999999999999999999999999999999999999999998899999
Q ss_pred HHHHHHhhccCCCCcEEEEeCCcccc-----Ccchh-hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhcc
Q 006639 305 LQAMCLHLGSKNENEFAFIQSPQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQ 378 (637)
Q Consensus 305 ~~~v~~f~d~~~~~~va~VQtPq~f~-----D~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~ 378 (637)
+++||||+||+.++++||||+||+|+ |+|+| +++||+++|+|+||+||++||||||++||+||+|.......
T Consensus 318 ~~amcff~Dp~~~~~vafVQfPQ~F~~i~~~D~y~~~~~vff~~~~~glDG~~gp~y~GTGc~~RR~al~G~~~~~~~-- 395 (734)
T PLN02893 318 LRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSLIL-- 395 (734)
T ss_pred HHHHHHhcCCCcCCceEEEeCcccccCCCcCCCCcchhHHHHHHHhhcccccCCceeeccceEEEHHHhcCCCccccc--
Confidence 99999999998899999999999999 89999 99999999999999999999999999999999987542100
Q ss_pred ccchHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHH
Q 006639 379 GNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIH 458 (637)
Q Consensus 379 ~~~~~~~~~~~~g~s~~~i~s~~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~ 458 (637)
+....++++... .......+.+++|++|++|+||++|.||+++||.++|+|||+.||++||
T Consensus 396 ------~~~~~~~~~~~~-------------~~~~~~~~~~~~a~~v~sC~ye~~t~WG~~~G~~ygsvtED~~Tg~~lh 456 (734)
T PLN02893 396 ------PEIPELNPDHLV-------------DKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQ 456 (734)
T ss_pred ------hhhhhccccccc-------------ccccchHHHHHHhhhccccccccCCccccccceEeccccccHHHHHHHH
Confidence 000001111000 0111234578899999999999999999999999999999999999999
Q ss_pred hCCCeEEEeCCCCceeeeccCCCHHHHHHHHHHHHhhhhHHHHhhcchhhhcccCCCcHHHHHHHHHHHHHHhhHHHHHH
Q 006639 459 SKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELC 538 (637)
Q Consensus 459 ~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~QR~RWa~G~~qil~~~~~p~~~~~~~~L~~~qrl~yl~~~~~~~~~l~~l~ 538 (637)
++|||++|++|+++++.|++|+|+.++++||+||++|++|++++++||++.+ .++|++.||++|++.++|++.+++.++
T Consensus 457 ~~GWrSvY~~p~~~af~G~aP~~l~~~l~Q~~RWa~G~lqI~~s~~nPl~~g-~~~L~~~Qrl~Y~~~~~~~~~slp~li 535 (734)
T PLN02893 457 CEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFG-VKSIGLLMGLGYAHYAFWPIWSIPITI 535 (734)
T ss_pred hcCCcEEecCCCchhhccCCCCCHHHHHHHHHHHHhhhHHHHhhccCchhhc-ccCCCHHHHHHHHHHHHHHHhHHHHHH
Confidence 9999999998766788999999999999999999999999999999999974 378999999999999999999999999
Q ss_pred HHHHHHHHHHhCCccccccCchhhHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhc
Q 006639 539 YIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFG 618 (637)
Q Consensus 539 ~~l~P~l~Ll~g~~i~p~~~~~~~~~l~~~fl~~~l~~ll~~~~~G~~~~~~w~~~~~w~i~~~~a~l~a~~~a~~~~l~ 618 (637)
|+++|++||++|++++|.++.++++.+++++++++++++++++++|.++.+||++|++|+|.++++++++++++++|.||
T Consensus 536 Y~~~P~l~Ll~g~~i~p~~s~~~f~~yi~l~~s~~~~~~lE~~~sG~t~~~WWn~qr~w~I~~~ss~l~a~l~~iLk~lg 615 (734)
T PLN02893 536 YAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLG 615 (734)
T ss_pred HHHHHHHHHHcCCcccccccHHHHHHHHHHHHHHHHHHHHHHhccCccHhhhcchheeeehHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999988888888888889999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeeeCcCCCcC
Q 006639 619 FSEAVFEITQKIHRS 633 (637)
Q Consensus 619 ~~~~~F~VTpKg~~~ 633 (637)
+++.+|+||+|+...
T Consensus 616 ~s~~~F~VT~K~~~~ 630 (734)
T PLN02893 616 ISTFGFNVTSKVVDE 630 (734)
T ss_pred ccCCceeecCCCccc
Confidence 999999999998553
No 10
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals. The genes that synthesize cellulose in higher plants differ greatly from the well-characterised genes found in Acetobacter and Agrobacterium spp. More correctly designated as "cellulose synthase catalytic subunits", plant cellulose synthase (CesA) proteins are integral membrane proteins, approximately 1,000 amino acids in length. There are a number of highly conserved residues, including several motifs shown to be necessary for processive glycosyltransferase activity [].; GO: 0016760 cellulose synthase (UDP-forming) activity, 0030244 cellulose biosynthetic process, 0016020 membrane
Probab=100.00 E-value=6.5e-139 Score=1163.55 Aligned_cols=536 Identities=47% Similarity=0.791 Sum_probs=496.9
Q ss_pred eeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccC
Q 006639 95 VDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 174 (637)
Q Consensus 95 VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf 174 (637)
|||||||.||.||||.+|+|||+|+||+|||.+||+|||+|||+++.|+++|.||++|||.||||||||+||||||++||
T Consensus 1 vDvFv~TaDP~~EPp~~~~nTvLS~lA~dYP~~kls~YvSDDg~s~ltf~al~Ea~~FA~~WvPFCkk~~ie~R~P~~YF 80 (720)
T PF03552_consen 1 VDVFVCTADPEKEPPLVTANTVLSILAYDYPVEKLSCYVSDDGGSMLTFYALMEAAKFAKHWVPFCKKYNIEPRAPEAYF 80 (720)
T ss_pred CceEEecCCCCcCCCeeeHHHHHHHHhhcCCccceeEEEecCCchHHHHHHHHHHHHHHhhhcchhhccCCccCCHHHHh
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC--CCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccC----CCccccccccccCCCceEEEeecCCCCC--
Q 006639 175 PDSE--PSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLT----GGMTVFSNTERMNHPTIVKVISENKGGL-- 246 (637)
Q Consensus 175 ~~~~--~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~v~~~~~~~~-- 246 (637)
+.+. .+++.+++|++||++||+||||||.|||.+.++.....+. .++++|++++++|||+||||+++++++.
T Consensus 81 ~~~~~~~~~~~~~~f~~e~~~~k~~ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~w~~~~~~dH~~iiqv~~~~~~~~~~ 160 (720)
T PF03552_consen 81 SSKIDPLKDKVQPEFVKERRAMKREYEEFKVRIEALVAKIQKVPEEGWTMQDGTPWPGNTRRDHPGIIQVLLDNPGGKDV 160 (720)
T ss_pred ccCCCcccCCcChhHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccceeccCCCcCCCCCCcCChhheEeeccCCCCccc
Confidence 9754 5566789999999999999999999999987654332222 2369999999999999999999988654
Q ss_pred -CCCCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeC
Q 006639 247 -SDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQS 325 (637)
Q Consensus 247 -~~~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQt 325 (637)
++++|+|+||+||||||++||+||||||+.+|||+++||+|||+++||||++|||+.++++||||+||+.++++||||+
T Consensus 161 ~g~~lP~lvYvsREKrp~~~Hh~KAGAmNaL~RvSa~~tN~p~iLnlDcD~y~nn~~~~~~amc~~~d~~~g~~~~~vQf 240 (720)
T PF03552_consen 161 DGNELPMLVYVSREKRPGYPHHFKAGAMNALLRVSAVMTNAPFILNLDCDMYINNSQALREAMCFFMDPKIGKKIAFVQF 240 (720)
T ss_pred ccCcCCeEEEEeccCCCCCCchhhhcccccccccceeecCCCEEEEecccccccchHHHHHHHHhhccCCCCCeeEEEeC
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ccccc-----Ccchh-hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhccc--------------------
Q 006639 326 PQYFY-----DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQG-------------------- 379 (637)
Q Consensus 326 Pq~f~-----D~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~-------------------- 379 (637)
||+|+ |+|+| +++||+++++|+||+|||+|+||||++||+||||.+++..+...
T Consensus 241 pq~f~~i~~~d~y~~~~~~~~~~~~~g~dG~~gp~y~Gtgc~~rR~al~g~~~~~~~~~~~~~~~~~~~c~~~~k~~~~~ 320 (720)
T PF03552_consen 241 PQRFDGIDKNDRYGNQNRVFFDINMRGLDGLQGPFYVGTGCFFRREALYGFDPPRYEKDPEKTCCCCSCCFGRRKKKKSK 320 (720)
T ss_pred CceeCCCCcCCCCCccceeeeeccccccccCCCceeeecCcceechhhhCCCCCchhcccCcceeeeecccCCccccccc
Confidence 99999 99999 99999999999999999999999999999999999887521100
Q ss_pred ------------------------------------cchHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHh
Q 006639 380 ------------------------------------NIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAH 423 (637)
Q Consensus 380 ------------------------------------~~~~~~~~~~~g~s~~~i~s~~~~~~g~~~~~~~~~~~~~~~~~ 423 (637)
.++..++.++||+|++||.|+..+..+.+ ......+.+++|+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S~~fi~S~~~~~~~~~--~~~~~~~~L~EA~ 398 (720)
T PF03552_consen 321 KKPKKRASKRRESSSPIFALEDIEEGAEGSDEERSSLMSQKELEKKFGQSPEFIASTLMAQGGVP--RSPSPASLLEEAI 398 (720)
T ss_pred ccchhccccccccccccccccccccccccchhhhhhcchhHHHHHHhcCCHHHHHHHHHHhcCCC--CCCChHHHHHHHH
Confidence 02345777899999999999875443222 2334567899999
Q ss_pred HhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCCHHHHHHHHHHHHhhhhHHHHhh
Q 006639 424 RVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILFSK 503 (637)
Q Consensus 424 ~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~QR~RWa~G~~qil~~~ 503 (637)
+|++|+||++|+||+|+||.|+++|||+.||++||++||||+|++|+++++.|.||+++.+.+.|++||+.|.+||++++
T Consensus 399 ~V~sC~YE~~T~WGkevGwiYGSvtEDv~TG~rmH~rGWrSvYc~p~r~AF~G~AP~nL~d~L~Q~~RWA~GslEI~fSr 478 (720)
T PF03552_consen 399 HVASCGYEDKTEWGKEVGWIYGSVTEDVLTGFRMHCRGWRSVYCNPKRPAFLGSAPINLSDRLHQVKRWATGSLEIFFSR 478 (720)
T ss_pred HHhcCCccccCCcccccceEEEecccccccceeEeeCceeeEEeccccchhcccCCCChhhhceeeeeEeeeeEeeehhc
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred cchhhhcccCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCccccccCchhhHHHHHHHHHHHHHHHHHHHHh
Q 006639 504 RNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPTVLIPLALFLIYKLYTLLEYIQA 583 (637)
Q Consensus 504 ~~p~~~~~~~~L~~~qrl~yl~~~~~~~~~l~~l~~~l~P~l~Ll~g~~i~p~~~~~~~~~l~~~fl~~~l~~ll~~~~~ 583 (637)
+||+++++.++|++.||++|++.++|++.+++.++|+++|++||++|++++|+++..++++++.+|+.++++++++++|+
T Consensus 479 ~~Pl~~g~~~rL~~lQrLaY~~~~~ypl~Sipll~Y~~lPalcLLtG~~i~Pk~s~~~~~~f~~lf~~~~~~~llE~~ws 558 (720)
T PF03552_consen 479 HCPLWYGYGGRLKFLQRLAYLNYMLYPLTSIPLLCYCFLPALCLLTGIFIFPKVSSPWFIYFLALFVSIYAYSLLEFRWS 558 (720)
T ss_pred CCchhccCCCCCcHHHHHHHHHHhhhHHHHHHHHHHHHhHHHHhhCCCcccCccccchhHHHHHHHHHHHHHHHHHHHhc
Confidence 99999976789999999999999999999999999999999999999999999998998888899999999999999999
Q ss_pred CCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCc
Q 006639 584 GLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHR 632 (637)
Q Consensus 584 G~~~~~~w~~~~~w~i~~~~a~l~a~~~a~~~~l~~~~~~F~VTpKg~~ 632 (637)
|.++++|||+||+|+|.++++|++|++++++|++|+++.+|.||+|...
T Consensus 559 G~si~~WWrnQq~W~I~~tSa~LfAvl~~iLK~lg~s~t~F~VTsK~~d 607 (720)
T PF03552_consen 559 GVSIREWWRNQQFWMIGGTSAHLFAVLQGILKVLGGSETSFTVTSKVSD 607 (720)
T ss_pred cCcHHHhhcccceeeehhhHHHHHHHHHHHHHHHcCCccceeecccccc
Confidence 9999999999999999999999999999999999999999999999876
No 11
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=100.00 E-value=2.6e-65 Score=592.33 Aligned_cols=415 Identities=23% Similarity=0.344 Sum_probs=333.2
Q ss_pred chHHHHHH-HHHHHHHHHHHHHHhccccCch-----hHHHHHHHHHHHHHHHHHHHHHheeccccCCCCcchhhcccCCC
Q 006639 19 NTYHRALD-VIILFLLLCLLFYRLSTLKNHG-----FAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQEL 92 (637)
Q Consensus 19 ~~~~r~~~-~~~~~~~~~yl~wR~~~~~~~~-----~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~~ 92 (637)
....+++. ++.+++.++|++||++.|++.+ ...++++++|+++.+..+++.+..+.|..|.+ ..++...+.+
T Consensus 182 ~~~~~~~l~~l~~~~~~rY~~WR~~~tL~~~~~~~~~~~~~ll~ae~~~~~~~~lg~~~~~~~~~r~~--~~~~~~~~~~ 259 (852)
T PRK11498 182 GRFSALMLIVLSLTVSCRYIWWRYTSTLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQP--VPLPKDMSLW 259 (852)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHheeeCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC--CCCCcccCCC
Confidence 33444444 4555567999999999999864 23467999999988888887777777777754 2333334678
Q ss_pred CceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCc
Q 006639 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (637)
Q Consensus 93 P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 172 (637)
|+|||+||||| |+.+++++|+.+++++|||+++++|||+|||++|.|.+
T Consensus 260 P~VsViIPtYN---E~~~vv~~tI~a~l~~dYP~~k~EViVVDDgS~D~t~~---------------------------- 308 (852)
T PRK11498 260 PTVDIFVPTYN---EDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQ---------------------------- 308 (852)
T ss_pred CcEEEEEecCC---CcHHHHHHHHHHHHhccCCCCceEEEEEeCCCChHHHH----------------------------
Confidence 99999999999 88889999999999999999999999999999996511
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCe
Q 006639 173 YFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPH 252 (637)
Q Consensus 173 yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~ 252 (637)
++++. |
T Consensus 309 ----------------------------la~~~-------------~--------------------------------- 314 (852)
T PRK11498 309 ----------------------------FAQEV-------------G--------------------------------- 314 (852)
T ss_pred ----------------------------HHHHC-------------C---------------------------------
Confidence 11111 1
Q ss_pred EEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcccc--
Q 006639 253 LVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY-- 330 (637)
Q Consensus 253 l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~-- 330 (637)
+.|++|++ |.|+||||+|+|++ +++||||+++|||++ |+||+|+++|++|. .++++|+||+||.|+
T Consensus 315 v~yI~R~~----n~~gKAGnLN~aL~----~a~GEyIavlDAD~i-p~pdfL~~~V~~f~---~dP~VglVQtp~~f~n~ 382 (852)
T PRK11498 315 VKYIARPT----HEHAKAGNINNALK----YAKGEFVAIFDCDHV-PTRSFLQMTMGWFL---KDKKLAMMQTPHHFFSP 382 (852)
T ss_pred cEEEEeCC----CCcchHHHHHHHHH----hCCCCEEEEECCCCC-CChHHHHHHHHHHH---hCCCeEEEEcceeccCC
Confidence 47888864 34699999999999 799999999999999 69999999999986 357899999999998
Q ss_pred Ccch----------h-hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHH
Q 006639 331 DRPE----------N-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKS 399 (637)
Q Consensus 331 D~~~----------~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s 399 (637)
|++. + .+.||+.++.|.|.+++.++||+++++||+++.
T Consensus 383 dp~~rnl~~~~~~~~e~~~fy~~iq~g~~~~~a~~~~Gs~aviRReaLe------------------------------- 431 (852)
T PRK11498 383 DPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLD------------------------------- 431 (852)
T ss_pred chHHHhhHHHhhcccchhHHHHHHHhHHHhhcccccccceeeeEHHHHH-------------------------------
Confidence 5542 2 357899999999999999999999999999984
Q ss_pred HHHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccC
Q 006639 400 AAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCAS 479 (637)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP 479 (637)
++| ||++++++||++++++++++||+++|++ .+.+.|++|
T Consensus 432 ------------------------eVG--------------Gfd~~titED~dlslRL~~~Gyrv~yl~--~~~a~glaP 471 (852)
T PRK11498 432 ------------------------EIG--------------GIAVETVTEDAHTSLRLHRRGYTSAYMR--IPQAAGLAT 471 (852)
T ss_pred ------------------------Hhc--------------CCCCCccCccHHHHHHHHHcCCEEEEEe--ccceeEECC
Confidence 354 7999999999999999999999999996 368899999
Q ss_pred CCHHHHHHHHHHHHhhhhHHHHhhcchhhhcccCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCccccccCc
Q 006639 480 PSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQE 559 (637)
Q Consensus 480 ~tl~~~~~QR~RWa~G~~qil~~~~~p~~~~~~~~L~~~qrl~yl~~~~~~~~~l~~l~~~l~P~l~Ll~g~~i~p~~~~ 559 (637)
+|++++++||.||++|++|++. +++|++. +++++.||++|+++++|++.+++.++|+++|++|+++|+.++.. +
T Consensus 472 esl~~~~~QR~RWarG~lQi~r-~~~pl~~---~gL~~~qRl~y~~~~l~~l~g~~~l~~l~~Pl~~l~~gi~~i~a-~- 545 (852)
T PRK11498 472 ESLSAHIGQRIRWARGMVQIFR-LDNPLTG---KGLKLAQRLCYANAMLHFLSGIPRLIFLTAPLAFLLLHAYIIYA-P- 545 (852)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-HhChhcc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChheeC-C-
Confidence 9999999999999999999996 5789886 89999999999999999999999999999999999999765543 1
Q ss_pred hhhHHHHHHHHHHHHHHHHHH-HHhCCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCcCccC
Q 006639 560 PTVLIPLALFLIYKLYTLLEY-IQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQRC 636 (637)
Q Consensus 560 ~~~~~l~~~fl~~~l~~ll~~-~~~G~~~~~~w~~~~~w~i~~~~a~l~a~~~a~~~~l~~~~~~F~VTpKg~~~~~~ 636 (637)
... +++.++++++...+.. ...|.....||++ ++..++++..+ ...+..++++++.+|+|||||+..++.
T Consensus 546 -~~~-i~~y~lP~~~~~~l~~~~~~g~~r~~~wse----iye~v~a~~l~-~~~~~~ll~p~~~~F~VTpKg~~~~~~ 616 (852)
T PRK11498 546 -ALM-IALFVLPHMIHASLTNSRIQGKYRHSFWSE----IYETVLAWYIA-PPTTVALFNPHKGKFNVTAKGGLVEEE 616 (852)
T ss_pred -hHH-HHHHHHHHHHHHHHHHHHhcCcchHhHHHH----HHHHHHHHHHH-HHHHHHHcCccCCCcccCCCCcccccc
Confidence 221 1233455555444433 3345555667765 55666676665 445555889999999999999876553
No 12
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=100.00 E-value=6.3e-65 Score=589.98 Aligned_cols=430 Identities=23% Similarity=0.329 Sum_probs=342.0
Q ss_pred HHHHHHHHHHH-HHHHHHHHHhccccCchh-----HHHHHHHHHHHHHHHHHHHHHheeccccCCCCcchhhcccCCCCc
Q 006639 21 YHRALDVIILF-LLLCLLFYRLSTLKNHGF-----AWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELPP 94 (637)
Q Consensus 21 ~~r~~~~~~~~-~~~~yl~wR~~~~~~~~~-----~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~~P~ 94 (637)
..|++.++..+ +.++|++||++.|++.+. ..++++++|+++.++.+++.+..+.|.+|.+.+ .+...+.+|+
T Consensus 55 ~~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~l~~~e~~~~~~~~~~~~~~~~~~~r~~~~--~~~~~~~~P~ 132 (713)
T TIGR03030 55 RPRLLLLVLSVFISLRYLWWRLTETLPFDNTLNFIFGTLLLLAELYSITILLLGYFQTVRPLDRTPVP--LPLDPEEWPT 132 (713)
T ss_pred hHHHHHHHHHHHHHHHHHHhheeeecCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccC--CCCCcccCCe
Confidence 34666654444 468999999999998642 356799999998888888877777777776522 2222467899
Q ss_pred eeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccC
Q 006639 95 VDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYF 174 (637)
Q Consensus 95 VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf 174 (637)
|||+||+|| |+++++++|+.+++++|||+++++|||+||||+|.|.....++
T Consensus 133 VsViIP~yN---E~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~------------------------- 184 (713)
T TIGR03030 133 VDVFIPTYN---EDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPE------------------------- 184 (713)
T ss_pred eEEEEcCCC---CCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhh-------------------------
Confidence 999999999 9888999999999999999999999999999999874322211
Q ss_pred CCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeEE
Q 006639 175 PDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLV 254 (637)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l~ 254 (637)
.+|.++-+.+.++++++. | +.
T Consensus 185 -------------~~~~~~~~~~~~~l~~~~-------------~---------------------------------v~ 205 (713)
T TIGR03030 185 -------------QAEAAQRREELKEFCRKL-------------G---------------------------------VN 205 (713)
T ss_pred -------------hhhhhhhHHHHHHHHHHc-------------C---------------------------------cE
Confidence 111111111222222221 1 58
Q ss_pred EEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcccc--Cc
Q 006639 255 YISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--DR 332 (637)
Q Consensus 255 Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~--D~ 332 (637)
|++|++ |.|+||||||+|++ .++||||+++|||++ |+||+|++++++|. .++++|+||+||.|+ |+
T Consensus 206 yi~r~~----n~~~KAgnLN~al~----~a~gd~Il~lDAD~v-~~pd~L~~~v~~f~---~dp~v~~Vqtp~~f~~p~~ 273 (713)
T TIGR03030 206 YITRPR----NVHAKAGNINNALK----HTDGELILIFDADHV-PTRDFLQRTVGWFV---EDPKLFLVQTPHFFVSPDP 273 (713)
T ss_pred EEECCC----CCCCChHHHHHHHH----hcCCCEEEEECCCCC-cChhHHHHHHHHHH---hCCCEEEEeCCeeccCCCH
Confidence 999875 45799999999999 799999999999999 58999999999997 357899999999998 44
Q ss_pred ch----------h-hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHH
Q 006639 333 PE----------N-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAA 401 (637)
Q Consensus 333 ~~----------~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~ 401 (637)
+. + ...||..++.|.|.++++++||+++++||+++.
T Consensus 274 ~~~nl~~~~~~~~e~~~f~~~i~~g~~~~~~~~~~Gs~~~iRR~al~--------------------------------- 320 (713)
T TIGR03030 274 IERNLGTFRRMPNENELFYGLIQDGNDFWNAAFFCGSAAVLRREALD--------------------------------- 320 (713)
T ss_pred HhhhhHHHHHhhhHHHHHHHHHHHHHhhhCCeeecCceeEEEHHHHH---------------------------------
Confidence 32 2 357889999999999999999999999999984
Q ss_pred HhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCC
Q 006639 402 QTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPS 481 (637)
Q Consensus 402 ~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~t 481 (637)
++| ||++++++||++++++|+++||+++|++ ++.+.|++|+|
T Consensus 321 ----------------------~iG--------------Gf~~~~vtED~~l~~rL~~~G~~~~y~~--~~~~~g~~p~s 362 (713)
T TIGR03030 321 ----------------------EIG--------------GIAGETVTEDAETALKLHRRGWNSAYLD--RPLIAGLAPET 362 (713)
T ss_pred ----------------------HcC--------------CCCCCCcCcHHHHHHHHHHcCCeEEEec--cccccccCCCC
Confidence 354 7999999999999999999999999996 46889999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHhhcchhhhcccCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCccccccCchh
Q 006639 482 GPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEPT 561 (637)
Q Consensus 482 l~~~~~QR~RWa~G~~qil~~~~~p~~~~~~~~L~~~qrl~yl~~~~~~~~~l~~l~~~l~P~l~Ll~g~~i~p~~~~~~ 561 (637)
++++++||.||++|++|++. ..+|++. +++++.||++|+++++||+.+++.++|+++|++++++|.++++. +..
T Consensus 363 l~~~~~Qr~RWa~G~~qi~~-~~~pl~~---~gl~~~qrl~y~~~~~~~~~~~~~~~~~~~P~~~l~~~~~~~~~-~~~- 436 (713)
T TIGR03030 363 LSGHIGQRIRWAQGMMQIFR-LDNPLLK---RGLSFPQRLCYLNAMLFWFFPLPRVIFLTAPLAYLFFGLNIFVA-SAL- 436 (713)
T ss_pred HHHHHHHHHHHhcChHHHHh-hhCcccc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceeC-CHH-
Confidence 99999999999999999986 4689886 79999999999999999999999999999999999999888775 212
Q ss_pred hHHHHHHHHHHHHHHHHHHH-HhCCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCcCcc
Q 006639 562 VLIPLALFLIYKLYTLLEYI-QAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQR 635 (637)
Q Consensus 562 ~~~l~~~fl~~~l~~ll~~~-~~G~~~~~~w~~~~~w~i~~~~a~l~a~~~a~~~~l~~~~~~F~VTpKg~~~~~ 635 (637)
.+++.++++++.+++.+. ..|.....||++ ++..+.++ +.+..++.+++++++.+|+|||||+..++
T Consensus 437 --~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~F~VT~Kg~~~~~ 504 (713)
T TIGR03030 437 --EILAYALPHMLHSLLTNSYLFGRVRWPFWSE----VYETVLAV-YLLPPVLVTLLNPKKPKFNVTPKGELLDE 504 (713)
T ss_pred --HHHHHHHHHHHHHHHHHHHHcCCeecchHHH----HHHHHHHH-HHHHHHHHHHhCcCCCCceecCCCccccc
Confidence 122445677777666543 456666778865 45555554 44566777789999999999999987554
No 13
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=100.00 E-value=1.1e-39 Score=374.28 Aligned_cols=348 Identities=16% Similarity=0.137 Sum_probs=245.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccCch-hH---H------HHHHHHHHHHHHHHHHHHHheeccccCCCCc---ch-hh
Q 006639 21 YHRALDVIILFLLLCLLFYRLSTLKNHG-FA---W------FLAFLCESCFTFIWILIVNCKWTPLTYKTYP---QR-LQ 86 (637)
Q Consensus 21 ~~r~~~~~~~~~~~~yl~wR~~~~~~~~-~~---w------~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~---~~-l~ 86 (637)
..|++.++..++...|..|+...+++.+ .. | .+++..+.+.+..-+++.+.... .|.... +. -.
T Consensus 40 ~rr~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~l~lf~~~~~w~~~~~~~a~~g~~~~~~--~~~~~~~~~~~~~~ 117 (691)
T PRK05454 40 LRRLILLGLTLAQTAVATWEMKAVLPYGGWTLLEPALLVLFALLFAWISLGFWTALMGFLQLLR--GRDKYSISASAAGD 117 (691)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCcccCCcccccC
Confidence 4677777777788999999998887653 21 1 12344444444333444332221 111110 10 01
Q ss_pred cccCCCCceeEEEecCCCCCCchHH----HHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhh
Q 006639 87 ERIQELPPVDMFVTTADAELEPPII----TVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKK 162 (637)
Q Consensus 87 ~~~~~~P~VdV~V~t~n~~~Ep~~~----v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~ 162 (637)
...+..|.|+|+||+|| |+++. ++.|+.|+.+++|| ++++++|+|||++|.+...- |
T Consensus 118 ~~~~~~~~VaVliP~yN---Ed~~~v~~~L~a~~~Sl~~~~~~-~~~e~~vLdD~~d~~~~~~e-~-------------- 178 (691)
T PRK05454 118 PPPPPEARTAILMPIYN---EDPARVFAGLRAMYESLAATGHG-AHFDFFILSDTRDPDIAAAE-E-------------- 178 (691)
T ss_pred CCCCCCCceEEEEeCCC---CChHHHHHHHHHHHHHHHhcCCC-CCEEEEEEECCCChhHHHHH-H--------------
Confidence 11356799999999999 77754 56666677779998 48999999999999752211 1
Q ss_pred ccccccCCCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecC
Q 006639 163 YNVQIRAPFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISEN 242 (637)
Q Consensus 163 ~~v~~r~p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~ 242 (637)
+.+++++++. +
T Consensus 179 ---------------------------------~~~~~L~~~~-------------~----------------------- 189 (691)
T PRK05454 179 ---------------------------------AAWLELRAEL-------------G----------------------- 189 (691)
T ss_pred ---------------------------------HHHHHHHHhc-------------C-----------------------
Confidence 1233444332 0
Q ss_pred CCCCCCCCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEE
Q 006639 243 KGGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAF 322 (637)
Q Consensus 243 ~~~~~~~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~ 322 (637)
..+++.|.+|+++ .|+||||+|++++..+ .++|||+++|||+++ .+|+|++++++|. .+|++|+
T Consensus 190 ------~~~~i~yr~R~~n----~~~KaGNl~~~~~~~~--~~~eyivvLDADs~m-~~d~L~~lv~~m~---~dP~vGl 253 (691)
T PRK05454 190 ------GEGRIFYRRRRRN----VGRKAGNIADFCRRWG--GAYDYMVVLDADSLM-SGDTLVRLVRLME---ANPRAGL 253 (691)
T ss_pred ------CCCcEEEEECCcC----CCccHHHHHHHHHhcC--CCcCEEEEEcCCCCC-CHHHHHHHHHHHh---hCcCEEE
Confidence 0134788888754 4689999999999433 678999999999995 8999999999997 3578999
Q ss_pred EeCCcccc--Cc-chh-----hHhHhhhhhhhhcccC--CceeeccCceeechhhhccccchhhccccchHHHHHHhhCC
Q 006639 323 IQSPQYFY--DR-PEN-----LCILNEYIGKGIVGIQ--GPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGN 392 (637)
Q Consensus 323 VQtPq~f~--D~-~~~-----~~~f~~~~~~g~d~~~--~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~ 392 (637)
||+|+.++ |. ++. ..++.+....|++.++ ...|+|+|+++||+++...+
T Consensus 254 VQt~~~~~n~~slfaR~qqf~~~~y~~~~~~G~~~w~~~~g~f~G~naIiR~~af~~~~--------------------- 312 (691)
T PRK05454 254 IQTLPVAVGADTLFARLQQFATRVYGPLFAAGLAWWQGGEGNYWGHNAIIRVKAFAEHC--------------------- 312 (691)
T ss_pred EeCCccCcCCCCHHHHHHHHHHHHHHHHHHhhhhhhccCccccccceEEEEHHHHHHhc---------------------
Confidence 99999888 32 333 2355556778888766 35689999999999995211
Q ss_pred cHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCc
Q 006639 393 SKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPH 472 (637)
Q Consensus 393 s~~~i~s~~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~ 472 (637)
|-+ ++.| .+||.+++++||++++.+|+++||+++|+++ ..
T Consensus 313 -------------glp---------------~L~g-----------~~p~~~~~LseD~~~a~~l~~~GyrV~~~pd-~~ 352 (691)
T PRK05454 313 -------------GLP---------------PLPG-----------RGPFGGHILSHDFVEAALMRRAGWGVWLAPD-LP 352 (691)
T ss_pred -------------CCc---------------cccc-----------cCCCCCCcccHHHHHHHHHHHCCCEEEEcCc-cc
Confidence 000 0101 1479999999999999999999999999963 24
Q ss_pred eeeeccCCCHHHHHHHHHHHHhhhhHHHHhhcchhhhcccCCCcHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 006639 473 AFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIAL 542 (637)
Q Consensus 473 ~~~g~aP~tl~~~~~QR~RWa~G~~qil~~~~~p~~~~~~~~L~~~qrl~yl~~~~~~~~~l~~l~~~l~ 542 (637)
.+++++|+|++++++||.||++|++|++.. ++. +++++.+|++|+..++.++.+...++++++
T Consensus 353 ~~~ee~P~tl~~~~~qr~RW~~G~lQ~l~~----l~~---~gl~~~~R~~~l~g~~~yl~~P~wll~l~l 415 (691)
T PRK05454 353 GSYEELPPNLLDELKRDRRWCQGNLQHLRL----LLA---KGLHPVSRLHFLTGIMSYLSAPLWLLFLLL 415 (691)
T ss_pred cccccCCCCHHHHHHHHHHHHhchHHHHHH----HHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999998742 333 789999999998876666655555544443
No 14
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=100.00 E-value=9.5e-37 Score=337.39 Aligned_cols=254 Identities=16% Similarity=0.126 Sum_probs=190.9
Q ss_pred CCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccC
Q 006639 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRA 169 (637)
Q Consensus 90 ~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~ 169 (637)
+..|.|+|+||+|| |+. .+.+|+.|+++++|| +++|+|+|||++|.|.+.+.+..+
T Consensus 72 ~~~p~vsViIP~yN---E~~-~i~~~l~sll~q~yp--~~eIivVdDgs~D~t~~~~~~~~~------------------ 127 (444)
T PRK14583 72 KGHPLVSILVPCFN---EGL-NARETIHAALAQTYT--NIEVIAINDGSSDDTAQVLDALLA------------------ 127 (444)
T ss_pred CCCCcEEEEEEeCC---CHH-HHHHHHHHHHcCCCC--CeEEEEEECCCCccHHHHHHHHHH------------------
Confidence 45799999999999 764 689999999999999 699999999999988655443110
Q ss_pred CCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCC
Q 006639 170 PFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDE 249 (637)
Q Consensus 170 p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 249 (637)
+
T Consensus 128 -------------------------------------------------------------------------------~ 128 (444)
T PRK14583 128 -------------------------------------------------------------------------------E 128 (444)
T ss_pred -------------------------------------------------------------------------------h
Confidence 0
Q ss_pred CCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccc
Q 006639 250 IPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYF 329 (637)
Q Consensus 250 ~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f 329 (637)
.|++.++.+++ +++||+|+|+|++ .+++||++++|||++ ++||+|++++.+|. .++++|.||+.+..
T Consensus 129 ~~~v~vv~~~~-----n~Gka~AlN~gl~----~a~~d~iv~lDAD~~-~~~d~L~~lv~~~~---~~~~~g~v~g~~~~ 195 (444)
T PRK14583 129 DPRLRVIHLAH-----NQGKAIALRMGAA----AARSEYLVCIDGDAL-LDKNAVPYLVAPLI---ANPRTGAVTGNPRI 195 (444)
T ss_pred CCCEEEEEeCC-----CCCHHHHHHHHHH----hCCCCEEEEECCCCC-cCHHHHHHHHHHHH---hCCCeEEEEcccee
Confidence 12234444433 2469999999999 689999999999999 59999999999987 35789999987655
Q ss_pred cC---cchh-----hHhHhhhhhhhhcccCCcee-eccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHH
Q 006639 330 YD---RPEN-----LCILNEYIGKGIVGIQGPFY-QGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSA 400 (637)
Q Consensus 330 ~D---~~~~-----~~~f~~~~~~g~d~~~~~~~-~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~ 400 (637)
.+ .++. ...++..+.++.+..+..++ .|+++.+||+++.
T Consensus 196 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~sG~~~~~rr~al~-------------------------------- 243 (444)
T PRK14583 196 RTRSTLIGRVQVGEFSSIIGLIKRTQRVYGQVFTVSGVVAAFRRRALA-------------------------------- 243 (444)
T ss_pred cCCCcchhhHHHHHHHHHHHHHHHHHHHhCCceEecCceeEEEHHHHH--------------------------------
Confidence 42 1222 22344445555555555544 4888889998873
Q ss_pred HHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCC
Q 006639 401 AQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASP 480 (637)
Q Consensus 401 ~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~ 480 (637)
++| ||++++++||++++++++.+||++.|.+ ++.+++++|+
T Consensus 244 -----------------------~vG--------------g~~~~~i~ED~dl~~rl~~~G~~i~~~p--~a~~~~~~p~ 284 (444)
T PRK14583 244 -----------------------DVG--------------YWSPDMITEDIDISWKLQLKHWSVFFEP--RGLCWILMPE 284 (444)
T ss_pred -----------------------HcC--------------CCCCCcccccHHHHHHHHHcCCeEEEee--ccEEeeeCCC
Confidence 354 7999999999999999999999999996 4799999999
Q ss_pred CHHHHHHHHHHHHhhhhHHHHhhcchhhhcccCCCcHHHHHHHHHHHHHHh
Q 006639 481 SGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGL 531 (637)
Q Consensus 481 tl~~~~~QR~RWa~G~~qil~~~~~p~~~~~~~~L~~~qrl~yl~~~~~~~ 531 (637)
|++++++||.||++|++|+++++...++.. ..+..+.+-+.|+.+.+|.+
T Consensus 285 t~~~~~~Qr~RW~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 334 (444)
T PRK14583 285 TLRGLWKQRLRWAQGGAEVFLKNMFKLWRW-RNRRMWLLFLEYSLSITWAF 334 (444)
T ss_pred CHHHHHHHHHHHhCcHHHHHHHHHHHHhCc-ccccHHHHHHHHHHHHHHHH
Confidence 999999999999999999997643333321 12233344455555544443
No 15
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=100.00 E-value=6.2e-38 Score=322.56 Aligned_cols=239 Identities=14% Similarity=0.226 Sum_probs=184.1
Q ss_pred eeEEEecCCCCCCchHHHHHHHHHHHc----CCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCC
Q 006639 95 VDMFVTTADAELEPPIITVNTVLSLLA----VDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAP 170 (637)
Q Consensus 95 VdV~V~t~n~~~Ep~~~v~~Tv~s~l~----ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p 170 (637)
|+|+||+|| ||+.++.+|+.+++. .+|+. +++|||+|||+++.... .|
T Consensus 1 ~SIliP~~n---e~~~~l~~~l~~~~~~~~~~~~~~-~~eI~vldD~~d~~~~~--~~---------------------- 52 (254)
T cd04191 1 TAIVMPVYN---EDPARVFAGLRAMYESLAKTGLAD-HFDFFILSDTRDPDIWL--AE---------------------- 52 (254)
T ss_pred CEEEEeCCC---CCHHHHHHHHHHHHHHHHhcCCcC-ceEEEEECCCCChHHHH--HH----------------------
Confidence 689999999 999999999999875 57622 79999999998873210 11
Q ss_pred CccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCC
Q 006639 171 FRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEI 250 (637)
Q Consensus 171 ~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 250 (637)
++++++|+++. + ..
T Consensus 53 ------------------------~~~~~~l~~~~-------------~-----------------------------~~ 66 (254)
T cd04191 53 ------------------------EAAWLDLCEEL-------------G-----------------------------AQ 66 (254)
T ss_pred ------------------------HHHHHHHHHHh-------------C-----------------------------CC
Confidence 01222333332 0 13
Q ss_pred CeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcccc
Q 006639 251 PHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY 330 (637)
Q Consensus 251 p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~ 330 (637)
+++.|++|++++ |+||||||+++... .+++|||+++|||++ ++||+|.+++++|. .+|++|+||+|+.+.
T Consensus 67 ~~v~~~~r~~~~----g~Kag~l~~~~~~~--~~~~~~i~~~DaD~~-~~p~~l~~~v~~~~---~~~~vg~vq~~~~~~ 136 (254)
T cd04191 67 GRIYYRRRRENT----GRKAGNIADFCRRW--GSRYDYMVVLDADSL-MSGDTIVRLVRRME---ANPRAGIIQTAPKLI 136 (254)
T ss_pred CcEEEEEcCCCC----CccHHHHHHHHHHh--CCCCCEEEEEeCCCC-CCHHHHHHHHHHHH---hCCCEEEEeCCceeE
Confidence 568999998755 48999999999831 278999999999999 58999999999997 357899999999998
Q ss_pred --Ccchh------hHhHhhhhhhhhcccCC--ceeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHH
Q 006639 331 --DRPEN------LCILNEYIGKGIVGIQG--PFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSA 400 (637)
Q Consensus 331 --D~~~~------~~~f~~~~~~g~d~~~~--~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~ 400 (637)
+.+-+ ...|...++.|++.+++ .+|+|++.++||++|....
T Consensus 137 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~~~----------------------------- 187 (254)
T cd04191 137 GAETLFARLQQFANRLYGPVFGRGLAAWQGGEGNYWGHNAIIRVAAFMEHC----------------------------- 187 (254)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccceEEEEEHHHHHHhc-----------------------------
Confidence 43322 24556677888877654 5889999999999995210
Q ss_pred HHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCC
Q 006639 401 AQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASP 480 (637)
Q Consensus 401 ~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~ 480 (637)
|. .++|+ .+||.+++++||+++|++++.+||+++|.+. ...+++++|+
T Consensus 188 -----~~---------------~~i~g-----------~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~-~~~~~~~~p~ 235 (254)
T cd04191 188 -----AL---------------PVLPG-----------RPPFGGHILSHDFVEAALMRRAGWEVRLAPD-LEGSYEECPP 235 (254)
T ss_pred -----CC---------------ccccC-----------CCCCCCCeecHHHHHHHHHHHcCCEEEEccC-CcceEeECCC
Confidence 00 12333 2479899999999999999999999999963 2336899999
Q ss_pred CHHHHHHHHHHHHhhhhH
Q 006639 481 SGPAGMRQQKRWATGLLE 498 (637)
Q Consensus 481 tl~~~~~QR~RWa~G~~q 498 (637)
|++++++||.||++|++|
T Consensus 236 ~~~~~~~qr~RW~~G~~q 253 (254)
T cd04191 236 TLIDFLKRDRRWCQGNLQ 253 (254)
T ss_pred CHHHHHHHHHHHHhhcCc
Confidence 999999999999999998
No 16
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=3.1e-35 Score=322.16 Aligned_cols=227 Identities=24% Similarity=0.305 Sum_probs=179.4
Q ss_pred CCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCC
Q 006639 92 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPF 171 (637)
Q Consensus 92 ~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~ 171 (637)
+|.|||+||+|| |+++++++|+.|++++||| +++|+|+|||++|.|.+.+.|. +.
T Consensus 53 ~p~vsviiP~yn---E~~~~~~~~l~s~~~~dyp--~~evivv~d~~~d~~~~~~~~~--------------~~------ 107 (439)
T COG1215 53 LPKVSVIIPAYN---EEPEVLEETLESLLSQDYP--RYEVIVVDDGSTDETYEILEEL--------------GA------ 107 (439)
T ss_pred CCceEEEEecCC---CchhhHHHHHHHHHhCCCC--CceEEEECCCCChhHHHHHHHH--------------Hh------
Confidence 599999999999 8888999999999999999 6899999999999875554431 10
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCC
Q 006639 172 RYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIP 251 (637)
Q Consensus 172 ~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p 251 (637)
+. +..+++
T Consensus 108 --------------------------------~~---------------------------~~~~~~------------- 115 (439)
T COG1215 108 --------------------------------EY---------------------------GPNFRV------------- 115 (439)
T ss_pred --------------------------------hc---------------------------CcceEE-------------
Confidence 00 000111
Q ss_pred eEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccccC
Q 006639 252 HLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYD 331 (637)
Q Consensus 252 ~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~D 331 (637)
.+. +.++++|++|+|.|+. .+++|+|+++|||++ |+||+|++++++|.|+ +..|.+|+|+.+..
T Consensus 116 --~~~------~~~~~gK~~al~~~l~----~~~~d~V~~~DaD~~-~~~d~l~~~~~~f~~~---~~~~v~~~~~~~~~ 179 (439)
T COG1215 116 --IYP------EKKNGGKAGALNNGLK----RAKGDVVVILDADTV-PEPDALRELVSPFEDP---PVGAVVGTPRIRNR 179 (439)
T ss_pred --Eec------cccCccchHHHHHHHh----hcCCCEEEEEcCCCC-CChhHHHHHHhhhcCC---CeeEEeCCceeeec
Confidence 111 1245789999999999 788999999999999 5999999999999863 34579999987773
Q ss_pred cc-hh-----h-----HhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHH
Q 006639 332 RP-EN-----L-----CILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSA 400 (637)
Q Consensus 332 ~~-~~-----~-----~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~ 400 (637)
+. .+ . ..++-....+.+.....+++|++.++||++|.
T Consensus 180 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~~~rr~aL~-------------------------------- 227 (439)
T COG1215 180 PDPSNLLGRIQAIEYLSAFYFRLRAASKGGLISFLSGSSSAFRRSALE-------------------------------- 227 (439)
T ss_pred CChhhhcchhcchhhhhhHHHhhhhhhhcCCeEEEcceeeeEEHHHHH--------------------------------
Confidence 21 22 1 12222222233333567889999999999994
Q ss_pred HHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCC
Q 006639 401 AQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASP 480 (637)
Q Consensus 401 ~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~ 480 (637)
++| ||..+++|||.+++++++.+|||+.|++ ++.+++++|+
T Consensus 228 -----------------------~~g--------------~~~~~~i~ED~~lt~~l~~~G~~~~~~~--~~~~~~~~p~ 268 (439)
T COG1215 228 -----------------------EVG--------------GWLEDTITEDADLTLRLHLRGYRVVYVP--EAIVWTEAPE 268 (439)
T ss_pred -----------------------HhC--------------CCCCCceeccHHHHHHHHHCCCeEEEee--cceEeeeCcc
Confidence 343 6999999999999999999999999996 4689999999
Q ss_pred CHHHHHHHHHHHHhhhhHHHHh
Q 006639 481 SGPAGMRQQKRWATGLLEILFS 502 (637)
Q Consensus 481 tl~~~~~QR~RWa~G~~qil~~ 502 (637)
|++++++||.||++|++|++..
T Consensus 269 t~~~~~~Qr~RW~~g~~~~~~~ 290 (439)
T COG1215 269 TLKELWRQRLRWARGGLQVLLL 290 (439)
T ss_pred cHHHHHHHHHHHHcccceeeeh
Confidence 9999999999999999999964
No 17
>PRK11204 N-glycosyltransferase; Provisional
Probab=100.00 E-value=9.8e-34 Score=310.36 Aligned_cols=228 Identities=20% Similarity=0.216 Sum_probs=176.7
Q ss_pred cCCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhcccccc
Q 006639 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIR 168 (637)
Q Consensus 89 ~~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r 168 (637)
.+..|.|+|+||+|| |+ +.+.+|+.|+++++|| +++|+|+|||++|.|.+.+.+..
T Consensus 50 ~~~~p~vsViIp~yn---e~-~~i~~~l~sl~~q~yp--~~eiiVvdD~s~d~t~~~l~~~~------------------ 105 (420)
T PRK11204 50 LKEYPGVSILVPCYN---EG-ENVEETISHLLALRYP--NYEVIAINDGSSDNTGEILDRLA------------------ 105 (420)
T ss_pred cCCCCCEEEEEecCC---CH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCccHHHHHHHHH------------------
Confidence 456899999999999 65 5899999999999999 78999999999998754443310
Q ss_pred CCCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCC
Q 006639 169 APFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSD 248 (637)
Q Consensus 169 ~p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 248 (637)
+
T Consensus 106 ----------------------------------~--------------------------------------------- 106 (420)
T PRK11204 106 ----------------------------------A--------------------------------------------- 106 (420)
T ss_pred ----------------------------------H---------------------------------------------
Confidence 0
Q ss_pred CCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcc
Q 006639 249 EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQY 328 (637)
Q Consensus 249 ~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~ 328 (637)
..|++.+++++++ .+||+|+|.|++ .+++||++++|||.+ ++||+|.+++..|. .+++++.||+...
T Consensus 107 ~~~~v~~i~~~~n-----~Gka~aln~g~~----~a~~d~i~~lDaD~~-~~~d~L~~l~~~~~---~~~~v~~v~g~~~ 173 (420)
T PRK11204 107 QIPRLRVIHLAEN-----QGKANALNTGAA----AARSEYLVCIDGDAL-LDPDAAAYMVEHFL---HNPRVGAVTGNPR 173 (420)
T ss_pred hCCcEEEEEcCCC-----CCHHHHHHHHHH----HcCCCEEEEECCCCC-CChhHHHHHHHHHH---hCCCeEEEECCce
Confidence 0133566665432 469999999999 689999999999998 48999999999996 3578999998766
Q ss_pred ccCc---chh-h----HhHhhhhhhhhcccCCcee-eccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHH
Q 006639 329 FYDR---PEN-L----CILNEYIGKGIVGIQGPFY-QGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKS 399 (637)
Q Consensus 329 f~D~---~~~-~----~~f~~~~~~g~d~~~~~~~-~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s 399 (637)
..+. .+. + ...+.....+....+...+ .|+++++||+++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~------------------------------- 222 (420)
T PRK11204 174 IRNRSTLLGRIQVGEFSSIIGLIKRAQRVYGRVFTVSGVITAFRKSALH------------------------------- 222 (420)
T ss_pred eccchhHHHHHHHHHHHHhhhHHHHHHHHhCCceEecceeeeeeHHHHH-------------------------------
Confidence 5522 111 1 1122222233223333333 4777788888773
Q ss_pred HHHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccC
Q 006639 400 AAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCAS 479 (637)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP 479 (637)
++| ||+++.++||++++++++++||++.|++ ++.++++.|
T Consensus 223 ------------------------~vg--------------g~~~~~~~ED~~l~~rl~~~G~~i~~~p--~~~~~~~~p 262 (420)
T PRK11204 223 ------------------------EVG--------------YWSTDMITEDIDISWKLQLRGWDIRYEP--RALCWILMP 262 (420)
T ss_pred ------------------------HhC--------------CCCCCcccchHHHHHHHHHcCCeEEecc--ccEEEeECc
Confidence 354 7999999999999999999999999995 478999999
Q ss_pred CCHHHHHHHHHHHHhhhhHHHHhh
Q 006639 480 PSGPAGMRQQKRWATGLLEILFSK 503 (637)
Q Consensus 480 ~tl~~~~~QR~RWa~G~~qil~~~ 503 (637)
+|++++++||.||++|++|.++++
T Consensus 263 ~t~~~~~~Qr~RW~~G~~~~l~~~ 286 (420)
T PRK11204 263 ETLKGLWKQRLRWAQGGAEVLLKN 286 (420)
T ss_pred ccHHHHHHHHHHHhcCHHHHHHHH
Confidence 999999999999999999999764
No 18
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=100.00 E-value=5.4e-33 Score=307.10 Aligned_cols=275 Identities=15% Similarity=0.163 Sum_probs=192.2
Q ss_pred CCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccC
Q 006639 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRA 169 (637)
Q Consensus 90 ~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~ 169 (637)
+.+|.|+|+||+|| |+ +.+.+||.|+++++||.++++|+|+|||++|.|.+.+.++.+
T Consensus 46 ~~~P~vsVIIP~yN---e~-~~l~~~l~sl~~q~yp~~~~eIiVVDd~StD~T~~il~~~~~------------------ 103 (439)
T TIGR03111 46 GKLPDITIIIPVYN---SE-DTLFNCIESIYNQTYPIELIDIILANNQSTDDSFQVFCRAQN------------------ 103 (439)
T ss_pred CCCCCEEEEEEeCC---Ch-HHHHHHHHHHHhcCCCCCCeEEEEEECCCChhHHHHHHHHHH------------------
Confidence 56899999999999 65 699999999999999998999999999999988665554210
Q ss_pred CCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCC
Q 006639 170 PFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDE 249 (637)
Q Consensus 170 p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 249 (637)
+ +
T Consensus 104 ----------------------------------~---------------------------~----------------- 105 (439)
T TIGR03111 104 ----------------------------------E---------------------------F----------------- 105 (439)
T ss_pred ----------------------------------h---------------------------C-----------------
Confidence 0 0
Q ss_pred CCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccc
Q 006639 250 IPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYF 329 (637)
Q Consensus 250 ~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f 329 (637)
|++..+.-+ ++++||+|+|+|++ .+++|||+++|||++ ++||+|++++..|. .+++++.|+..+.-
T Consensus 106 -~~v~v~~~~-----~~~Gka~AlN~gl~----~s~g~~v~~~DaD~~-~~~d~L~~l~~~f~---~~~~v~~v~g~~~~ 171 (439)
T TIGR03111 106 -PGLSLRYMN-----SDQGKAKALNAAIY----NSIGKYIIHIDSDGK-LHKDAIKNMVTRFE---NNPDIHAMTGVILT 171 (439)
T ss_pred -CCeEEEEeC-----CCCCHHHHHHHHHH----HccCCEEEEECCCCC-cChHHHHHHHHHHH---hCCCeEEEEeEEec
Confidence 111111111 12589999999999 689999999999999 59999999999997 34667776643322
Q ss_pred c-Ccch-------h---hHhHhhhhh-----hhhc-ccCCce-eeccCceeechhhhccccchhhccccchHHHHHHhhC
Q 006639 330 Y-DRPE-------N---LCILNEYIG-----KGIV-GIQGPF-YQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFG 391 (637)
Q Consensus 330 ~-D~~~-------~---~~~f~~~~~-----~g~d-~~~~~~-~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g 391 (637)
. +... . ...+++... ++.. ..+..+ ..|+++++||+++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~l~~r~~~s~~~~~~~~sGa~~~~Rr~~l------------------------ 227 (439)
T TIGR03111 172 DKELIEKTKGRFLKLIRRCEYFEYAQAFLAGRNFESQVNSLFTLSGAFSAFRRETI------------------------ 227 (439)
T ss_pred CchhhhhhcchhhhHhHHhHHHHHHHHHHhhhHHHHhcCCeEEEccHHHhhhHHHH------------------------
Confidence 1 1110 0 000111100 1111 111222 2355556666665
Q ss_pred CcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHh-CCCeEEEeCCC
Q 006639 392 NSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHS-KGWRSGYCLPI 470 (637)
Q Consensus 392 ~s~~~i~s~~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~-~Gwr~~y~~~~ 470 (637)
+++| ||+.++++||++++++++. .|+++.|++
T Consensus 228 -------------------------------~~vg--------------gf~~~~i~ED~~l~~rl~~~~g~kv~~~~-- 260 (439)
T TIGR03111 228 -------------------------------LKTQ--------------LYNSETVGEDTDMTFQIRELLDGKVYLCE-- 260 (439)
T ss_pred -------------------------------HHhC--------------CCCCCCcCccHHHHHHHHHhcCCeEEECC--
Confidence 3454 7999999999999999975 699999985
Q ss_pred CceeeeccCCCHHHHHHHHHHHHhhhhHHHHhhcchhhhcccCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhC
Q 006639 471 PHAFLGCASPSGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITN 550 (637)
Q Consensus 471 ~~~~~g~aP~tl~~~~~QR~RWa~G~~qil~~~~~p~~~~~~~~L~~~qrl~yl~~~~~~~~~l~~l~~~l~P~l~Ll~g 550 (637)
++.++.++|+|++++++||.||++|.+|++....++... ++.++.+++.+...+......++.+++..+++++.++|
T Consensus 261 ~a~~~~~~p~t~~~~~~QR~RW~rG~~qv~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (439)
T TIGR03111 261 NAIFYVDPIDGLNKLYTQRQRWQRGELEVSHMFFESANK---SIKGFFSNFMVRRIMYDHTFAFPRMIWYFAMIFLIFLG 337 (439)
T ss_pred CCEEEEECCcCHHHHHHHHHHHhccHHHHHHHHHhhhhh---chhhhhhHHHHHHHHhhHhhHHHHHHHHHHHHHHHHhc
Confidence 478999999999999999999999999999653333332 44666666554444344445667777778888877777
Q ss_pred Cc
Q 006639 551 ST 552 (637)
Q Consensus 551 ~~ 552 (637)
.+
T Consensus 338 ~~ 339 (439)
T TIGR03111 338 YP 339 (439)
T ss_pred cH
Confidence 43
No 19
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=100.00 E-value=8.1e-31 Score=291.95 Aligned_cols=261 Identities=16% Similarity=0.110 Sum_probs=180.6
Q ss_pred cCCCCceeEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccc
Q 006639 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLL-AVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQI 167 (637)
Q Consensus 89 ~~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l-~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~ 167 (637)
..+.|+|+|+||+|| |. .++.+||.+++ ++||| +++|+|+||+++|.|.+.+.+..
T Consensus 62 ~~~~p~vaIlIPA~N---E~-~vI~~~l~s~L~~ldY~--~~eIiVv~d~ndd~T~~~v~~l~----------------- 118 (504)
T PRK14716 62 SVPEKRIAIFVPAWR---EA-DVIGRMLEHNLATLDYE--NYRIFVGTYPNDPATLREVDRLA----------------- 118 (504)
T ss_pred cCCCCceEEEEeccC---ch-hHHHHHHHHHHHcCCCC--CeEEEEEECCCChhHHHHHHHHH-----------------
Confidence 345899999999999 64 59999999965 79998 89999999999998866555421
Q ss_pred cCCCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCC
Q 006639 168 RAPFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLS 247 (637)
Q Consensus 168 r~p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 247 (637)
..||.
T Consensus 119 --------------------------------------------------------------~~~p~------------- 123 (504)
T PRK14716 119 --------------------------------------------------------------ARYPR------------- 123 (504)
T ss_pred --------------------------------------------------------------HHCCC-------------
Confidence 01222
Q ss_pred CCCCeEEEEeccCCCCCCCCCchHHHHHHHHhcC--CC---CCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEE
Q 006639 248 DEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSG--LM---TNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAF 322 (637)
Q Consensus 248 ~~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~--~~---s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~ 322 (637)
+..+. .+++| .++||+|||++++... -. .++|+|+++|||.++ +|++|+....++. +.++
T Consensus 124 -----v~~vv-~~~~g--p~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v-~Pd~Lr~~~~~~~------~~~~ 188 (504)
T PRK14716 124 -----VHLVI-VPHDG--PTSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVI-HPLELRLYNYLLP------RHDF 188 (504)
T ss_pred -----eEEEE-eCCCC--CCCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCc-CccHHHHHHhhcC------CCCE
Confidence 11111 11122 2589999999987310 01 234999999999995 9999997655442 3578
Q ss_pred EeCCccccCcc-hh------hHhH---hhhhhhhhcccCCce-eeccCceeechhhhccccchhhccccchHHHHHHhhC
Q 006639 323 IQSPQYFYDRP-EN------LCIL---NEYIGKGIVGIQGPF-YQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFG 391 (637)
Q Consensus 323 VQtPq~f~D~~-~~------~~~f---~~~~~~g~d~~~~~~-~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g 391 (637)
||.|....++- .+ ..-| +...+..++..++++ ++|+|+.+||++|..+.
T Consensus 189 VQ~pv~~~~~~~~~~~ag~y~~ef~~~~~~~l~~r~~LG~~~~~~Gtg~afRR~aLe~l~-------------------- 248 (504)
T PRK14716 189 VQLPVFSLPRDWGEWVAGTYMDEFAESHLKDLPVREALGGLIPSAGVGTAFSRRALERLA-------------------- 248 (504)
T ss_pred EecceeccCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCeeEEeEHHHHHHHH--------------------
Confidence 99997655221 11 1112 222345667788775 57999999999994110
Q ss_pred CcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCC
Q 006639 392 NSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIP 471 (637)
Q Consensus 392 ~s~~~i~s~~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~ 471 (637)
.+-|| ++|+++++|||+++|++++.+|||++|++. .
T Consensus 249 -------------------------------~~~GG------------~~fd~~sLTED~dLglRL~~~G~rv~y~p~-a 284 (504)
T PRK14716 249 -------------------------------AERGG------------QPFDSDSLTEDYDIGLRLKRAGFRQIFVRV-R 284 (504)
T ss_pred -------------------------------hhcCC------------CCCCCCCcchHHHHHHHHHHCCCEEEEecc-c
Confidence 01121 139999999999999999999999999852 2
Q ss_pred --------------ceeeeccCCCHHHHHHHHHHHHhhh-hHHHHhhc-chhhhcccCCCcHHHHHHHHHHHH
Q 006639 472 --------------HAFLGCASPSGPAGMRQQKRWATGL-LEILFSKR-NPILATLIGKLQFRQCLAYLWILT 528 (637)
Q Consensus 472 --------------~~~~g~aP~tl~~~~~QR~RWa~G~-~qil~~~~-~p~~~~~~~~L~~~qrl~yl~~~~ 528 (637)
...++++|+|++++++||.||++|- +|...+.- +..+. .+.+.+++|.+-+...+
T Consensus 285 i~~~~~~~~~~~~~v~t~e~~P~t~~a~~rQR~RW~~Gi~~Q~~~~~gw~~~~~--~~~~~~rdr~~~~~~~~ 355 (504)
T PRK14716 285 ADDTTDRPDRRGEPIATREFFPDTFKAAVRQKARWIYGIAFQGWERLGWKGPAA--TKYMLWRDRKGLLTNLL 355 (504)
T ss_pred ccccccccccccccccccccCccCHHHHHHHHHHHHhchHHhhHHhcCCCCchh--hhhhHHHHHHHHHHHHH
Confidence 1245889999999999999999995 79874321 11111 14577888888776543
No 20
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.97 E-value=7.3e-29 Score=286.48 Aligned_cols=237 Identities=18% Similarity=0.183 Sum_probs=169.4
Q ss_pred cCCCCceeEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccc
Q 006639 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLL-AVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQI 167 (637)
Q Consensus 89 ~~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l-~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~ 167 (637)
.++.|+|+|+||+|| |+ .++.+|+.+++ ++||| +++|+|+||++++.|.+++.+.. ++
T Consensus 59 ~~~~~~vsIlVPa~n---E~-~vi~~~i~~ll~~ldYP--~~eI~vi~~~nD~~T~~~~~~l~----------~~----- 117 (727)
T PRK11234 59 KPDEKPLAIMVPAWN---ET-GVIGNMAELAATTLDYE--NYHIFVGTYPNDPATQADVDAVC----------AR----- 117 (727)
T ss_pred cCCCCCEEEEEecCc---ch-hhHHHHHHHHHHhCCCC--CeEEEEEecCCChhHHHHHHHHH----------HH-----
Confidence 456799999999999 65 59999999987 79999 59999999888777765544321 11
Q ss_pred cCCCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCC
Q 006639 168 RAPFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLS 247 (637)
Q Consensus 168 r~p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 247 (637)
||.+.
T Consensus 118 ----------------------------------------------------------------~p~~~----------- 122 (727)
T PRK11234 118 ----------------------------------------------------------------FPNVH----------- 122 (727)
T ss_pred ----------------------------------------------------------------CCCcE-----------
Confidence 11111
Q ss_pred CCCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCC-----CCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEE
Q 006639 248 DEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGL-----MTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAF 322 (637)
Q Consensus 248 ~~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~-----~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~ 322 (637)
++.+.| +| .++||+|||+++..... ....+.++++|||.++ +||+|+ .+.++.+ +. ++
T Consensus 123 -----~v~~~~---~g--~~gKa~aLN~~l~~~~~~e~~~~~~~~vvvi~DAD~~v-~pd~L~-~~~~l~~----~~-~~ 185 (727)
T PRK11234 123 -----KVVCAR---PG--PTSKADCLNNVLDAITQFERSANFAFAGFILHDAEDVI-SPMELR-LFNYLVE----RK-DL 185 (727)
T ss_pred -----EEEeCC---CC--CCCHHHHHHHHHHHHHhhhcccCCcccEEEEEcCCCCC-ChhHHH-HHHhhcC----CC-Ce
Confidence 122233 22 35899999999984200 1245778899999995 999998 6777763 33 89
Q ss_pred EeCCccccCcc-hh---------hHhHhhhhhhhhcccCCce-eeccCceeechhhhccccchhhccccchHHHHHHhhC
Q 006639 323 IQSPQYFYDRP-EN---------LCILNEYIGKGIVGIQGPF-YQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFG 391 (637)
Q Consensus 323 VQtPq~f~D~~-~~---------~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g 391 (637)
||.|..-.++. .+ ....+...+.+++.++|++ +.|+|+.+.|+++.
T Consensus 186 VQ~p~~p~~~~~~~~~~~~~~~EFa~~~~~~~~~~~~lgg~~~l~G~~~af~Rr~l~----------------------- 242 (727)
T PRK11234 186 IQIPVYPFEREWTHFTSGTYIDEFAELHGKDVPVREALAGQVPSAGVGTCFSRRAVT----------------------- 242 (727)
T ss_pred EeecccCCCccHHHHHHHHHHHHHHHHhhhhhHHHHHcCCCcccCCceEEEecccHH-----------------------
Confidence 99996543321 11 1122335567888887765 46999999555441
Q ss_pred CcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCC--
Q 006639 392 NSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLP-- 469 (637)
Q Consensus 392 ~s~~~i~s~~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~-- 469 (637)
++.++|+ ..||+++++|||+++|++|+.+||++.|++.
T Consensus 243 -----------------------------al~~~gg-----------g~~~~~~~lTED~dlg~rL~~~G~~v~f~~~~v 282 (727)
T PRK11234 243 -----------------------------ALLEDGD-----------GIAFDVQSLTEDYDIGFRLKEKGMREIFVRFPV 282 (727)
T ss_pred -----------------------------HHHHhcC-----------CCCcCCCcchHHHHHHHHHHHCCCEEEEccccc
Confidence 1124542 1269999999999999999999999999861
Q ss_pred -------------------CCceeeeccCCCHHHHHHHHHHHHhh-hhHHHH
Q 006639 470 -------------------IPHAFLGCASPSGPAGMRQQKRWATG-LLEILF 501 (637)
Q Consensus 470 -------------------~~~~~~g~aP~tl~~~~~QR~RWa~G-~~qil~ 501 (637)
+...++++.|+|+++.++||.||.+| .+|.+.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~t~~~~~rQR~RW~~G~~~q~~~ 334 (727)
T PRK11234 283 VDEAKEREQRKFLQHARTSNMICVREYFPDTFSAAVRQKSRWIIGIVFQGFK 334 (727)
T ss_pred ccccccccccccccccccccceEEEEeCchhHHHHHHHHHHHHcccHHHHHH
Confidence 01448899999999999999999999 588764
No 21
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=99.97 E-value=8.2e-30 Score=256.31 Aligned_cols=222 Identities=19% Similarity=0.225 Sum_probs=170.1
Q ss_pred CceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCc
Q 006639 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (637)
Q Consensus 93 P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 172 (637)
|.|+|+||+|| |. +.+.++|.|+++++||.++++|+|+|| ++|.|...+.+...
T Consensus 1 p~vSViIp~yN---e~-~~l~~~L~sl~~q~~~~~~~eIiVvD~-s~D~t~~~~~~~~~--------------------- 54 (232)
T cd06437 1 PMVTVQLPVFN---EK-YVVERLIEAACALDYPKDRLEIQVLDD-STDETVRLAREIVE--------------------- 54 (232)
T ss_pred CceEEEEecCC---cH-HHHHHHHHHHHhcCCCccceEEEEEEC-CCCcHHHHHHHHHH---------------------
Confidence 78999999999 65 589999999999999988899999998 88988766554210
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCe
Q 006639 173 YFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPH 252 (637)
Q Consensus 173 yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~ 252 (637)
.... .-++
T Consensus 55 -------------------------------~~~~-----------------------------------------~~~~ 62 (232)
T cd06437 55 -------------------------------EYAA-----------------------------------------QGVN 62 (232)
T ss_pred -------------------------------HHhh-----------------------------------------cCCc
Confidence 0000 0123
Q ss_pred EEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccccCc
Q 006639 253 LVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDR 332 (637)
Q Consensus 253 l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~D~ 332 (637)
+.++.+.++. ++|++|+|.|++ .+++|||+++|||+++ +|++|.+++.++. ++++++||.+..+.++
T Consensus 63 i~~~~~~~~~----G~k~~a~n~g~~----~a~~~~i~~~DaD~~~-~~~~l~~~~~~~~----~~~v~~v~~~~~~~~~ 129 (232)
T cd06437 63 IKHVRRADRT----GYKAGALAEGMK----VAKGEYVAIFDADFVP-PPDFLQKTPPYFA----DPKLGFVQTRWGHINA 129 (232)
T ss_pred eEEEECCCCC----CCchHHHHHHHH----hCCCCEEEEEcCCCCC-ChHHHHHhhhhhc----CCCeEEEecceeeEcC
Confidence 5666665443 479999999999 7899999999999995 8999999777765 3679999987655422
Q ss_pred chh---------hHhHhhhhhhhhcccCCce-eeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHH
Q 006639 333 PEN---------LCILNEYIGKGIVGIQGPF-YQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQ 402 (637)
Q Consensus 333 ~~~---------~~~f~~~~~~g~d~~~~~~-~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~ 402 (637)
-.+ ...++...+.+....+..+ .+|+++++||+++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~---------------------------------- 175 (232)
T cd06437 130 NYSLLTRVQAMSLDYHFTIEQVARSSTGLFFNFNGTAGVWRKECIE---------------------------------- 175 (232)
T ss_pred CCchhhHhhhhhHHhhhhHhHhhHhhcCCeEEeccchhhhhHHHHH----------------------------------
Confidence 111 1223444444444444333 46888888888773
Q ss_pred hhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCCH
Q 006639 403 TLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSG 482 (637)
Q Consensus 403 ~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~tl 482 (637)
++| ||+..+..||+++++|++.+||++.|++ .+.++++.|+|+
T Consensus 176 ---------------------~vg--------------g~~~~~~~ED~~l~~rl~~~G~~~~~~~--~~~v~~~~~~~~ 218 (232)
T cd06437 176 ---------------------DAG--------------GWNHDTLTEDLDLSYRAQLKGWKFVYLD--DVVVPAELPASM 218 (232)
T ss_pred ---------------------HhC--------------CCCCCcchhhHHHHHHHHHCCCeEEEec--cceeeeeCCcCH
Confidence 354 7988889999999999999999999996 478999999999
Q ss_pred HHHHHHHHHHHhhh
Q 006639 483 PAGMRQQKRWATGL 496 (637)
Q Consensus 483 ~~~~~QR~RWa~G~ 496 (637)
+++++||+||++|.
T Consensus 219 ~~~~~q~~rW~~g~ 232 (232)
T cd06437 219 SAYRSQQHRWSKGP 232 (232)
T ss_pred HHHHHHHHHhccCC
Confidence 99999999999994
No 22
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=99.97 E-value=2.6e-29 Score=250.88 Aligned_cols=224 Identities=32% Similarity=0.492 Sum_probs=180.3
Q ss_pred CceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCc
Q 006639 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (637)
Q Consensus 93 P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 172 (637)
|.|+|+||+|| |+++.+++++.|+++++||.++++|+|+|||++|.|.+.+.+..
T Consensus 1 p~vsviip~~n---~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~---------------------- 55 (234)
T cd06421 1 PTVDVFIPTYN---EPLEIVRKTLRAALAIDYPHDKLRVYVLDDGRRPELRALAAELG---------------------- 55 (234)
T ss_pred CceEEEEecCC---CcHHHHHHHHHHHHhcCCCcccEEEEEEcCCCchhHHHHHHHhh----------------------
Confidence 78999999999 77789999999999999998779999999999997643332100
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCe
Q 006639 173 YFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPH 252 (637)
Q Consensus 173 yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~ 252 (637)
.+ .+
T Consensus 56 ------------------------------~~----------------------------------------------~~ 59 (234)
T cd06421 56 ------------------------------VE----------------------------------------------YG 59 (234)
T ss_pred ------------------------------cc----------------------------------------------cC
Confidence 00 01
Q ss_pred EEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcccc--
Q 006639 253 LVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY-- 330 (637)
Q Consensus 253 l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~-- 330 (637)
+.++.+++ +.++|+||+|.|++ .+++|||+++|+|.++ +|++|.+++..|.+ +++++.|++++.+.
T Consensus 60 ~~~~~~~~----~~~~~~~~~n~~~~----~a~~d~i~~lD~D~~~-~~~~l~~l~~~~~~---~~~~~~v~~~~~~~~~ 127 (234)
T cd06421 60 YRYLTRPD----NRHAKAGNLNNALA----HTTGDFVAILDADHVP-TPDFLRRTLGYFLD---DPKVALVQTPQFFYNP 127 (234)
T ss_pred ceEEEeCC----CCCCcHHHHHHHHH----hCCCCEEEEEccccCc-CccHHHHHHHHHhc---CCCeEEEecceEEecC
Confidence 24445543 33589999999999 6899999999999995 89999999999973 47899999998887
Q ss_pred Ccc---hh-----hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHH
Q 006639 331 DRP---EN-----LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQ 402 (637)
Q Consensus 331 D~~---~~-----~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~ 402 (637)
+.. .. ...++..+..+.+.++...++|++.++||+++.
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~~---------------------------------- 173 (234)
T cd06421 128 DPFDWLADGAPNEQELFYGVIQPGRDRWGAAFCCGSGAVVRREALD---------------------------------- 173 (234)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHhhcCCceecCceeeEeHHHHH----------------------------------
Confidence 322 11 345555566666666677888999999999883
Q ss_pred hhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCCH
Q 006639 403 TLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSG 482 (637)
Q Consensus 403 ~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~tl 482 (637)
++| ||+...+.||++++++++.+||++.|.+ .+.++++.|+++
T Consensus 174 ---------------------~ig--------------~~~~~~~~eD~~l~~r~~~~g~~i~~~~--~~~~~~~~~~~~ 216 (234)
T cd06421 174 ---------------------EIG--------------GFPTDSVTEDLATSLRLHAKGWRSVYVP--EPLAAGLAPETL 216 (234)
T ss_pred ---------------------HhC--------------CCCccceeccHHHHHHHHHcCceEEEec--CccccccCCccH
Confidence 243 6887888999999999999999999996 368899999999
Q ss_pred HHHHHHHHHHHhhhhHHH
Q 006639 483 PAGMRQQKRWATGLLEIL 500 (637)
Q Consensus 483 ~~~~~QR~RWa~G~~qil 500 (637)
+++++||.||.+|++|++
T Consensus 217 ~~~~~q~~rw~~~~~~~~ 234 (234)
T cd06421 217 AAYIKQRLRWARGMLQIL 234 (234)
T ss_pred HHHHHHHHHHhcCCeeeC
Confidence 999999999999999853
No 23
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=99.96 E-value=1e-28 Score=250.39 Aligned_cols=226 Identities=22% Similarity=0.305 Sum_probs=172.1
Q ss_pred CceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCc
Q 006639 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (637)
Q Consensus 93 P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 172 (637)
|.|+|+||+|| |+ +.+.+||.|+++++||.++++|+|+|||++|.|.+.+.+.. +
T Consensus 1 p~vsIiIp~~N---e~-~~l~~~l~sl~~~~y~~~~~eiivVdd~s~d~t~~i~~~~~---~------------------ 55 (241)
T cd06427 1 PVYTILVPLYK---EA-EVLPQLIASLSALDYPRSKLDVKLLLEEDDEETIAAARALR---L------------------ 55 (241)
T ss_pred CeEEEEEecCC---cH-HHHHHHHHHHHhCcCCcccEEEEEEECCCCchHHHHHHHhc---c------------------
Confidence 78999999999 65 68999999999999998889999999999998755443210 0
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCe
Q 006639 173 YFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPH 252 (637)
Q Consensus 173 yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~ 252 (637)
+. ..+
T Consensus 56 ------------------------------------------------------------~~---------------~~~ 60 (241)
T cd06427 56 ------------------------------------------------------------PS---------------IFR 60 (241)
T ss_pred ------------------------------------------------------------CC---------------Cee
Confidence 00 011
Q ss_pred EEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccccCc
Q 006639 253 LVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDR 332 (637)
Q Consensus 253 l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~D~ 332 (637)
++++... ...+|++|+|.|++ .++||||+.+|+|.++ +|++|.+++.+|.+ .++++++||.+..+++.
T Consensus 61 i~~~~~~-----~~~G~~~a~n~g~~----~a~gd~i~~~DaD~~~-~~~~l~~~~~~~~~--~~~~v~~~~~~~~~~~~ 128 (241)
T cd06427 61 VVVVPPS-----QPRTKPKACNYALA----FARGEYVVIYDAEDAP-DPDQLKKAVAAFAR--LDDKLACVQAPLNYYNA 128 (241)
T ss_pred EEEecCC-----CCCchHHHHHHHHH----hcCCCEEEEEcCCCCC-ChHHHHHHHHHHHh--cCCCEEEEeCceEeeCC
Confidence 2333322 12479999999999 7999999999999995 89999999999973 23689999988766632
Q ss_pred chh---------hHhHhhhhhhhhcccCCcee-eccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHH
Q 006639 333 PEN---------LCILNEYIGKGIVGIQGPFY-QGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQ 402 (637)
Q Consensus 333 ~~~---------~~~f~~~~~~g~d~~~~~~~-~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~ 402 (637)
-.+ ....+....++....+..+. .|++.++||+++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~---------------------------------- 174 (241)
T cd06427 129 RENWLTRMFALEYAAWFDYLLPGLARLGLPIPLGGTSNHFRTDVLR---------------------------------- 174 (241)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCchHHhhHHHHH----------------------------------
Confidence 111 11223334455544444443 4677778888773
Q ss_pred hhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCCH
Q 006639 403 TLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSG 482 (637)
Q Consensus 403 ~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~tl 482 (637)
++| ||+....+||+++++|++.+||++.+++ . .++++.|+|+
T Consensus 175 ---------------------~vg--------------g~~~~~~~eD~~l~~rl~~~G~r~~~~~--~-~~~~~~~~~~ 216 (241)
T cd06427 175 ---------------------ELG--------------GWDPFNVTEDADLGLRLARAGYRTGVLN--S-TTLEEANNAL 216 (241)
T ss_pred ---------------------HcC--------------CCCcccchhhHHHHHHHHHCCceEEEec--c-cccccCcHhH
Confidence 354 6888788999999999999999999995 2 4578999999
Q ss_pred HHHHHHHHHHHhhhhHHHHh
Q 006639 483 PAGMRQQKRWATGLLEILFS 502 (637)
Q Consensus 483 ~~~~~QR~RWa~G~~qil~~ 502 (637)
+++++||.||+.|.+|++..
T Consensus 217 ~~~~~q~~Rw~~g~~~~~~~ 236 (241)
T cd06427 217 GNWIRQRSRWIKGYMQTWLV 236 (241)
T ss_pred HHHHHHHHHHhccHHHHHHH
Confidence 99999999999999999854
No 24
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=99.96 E-value=5e-28 Score=243.16 Aligned_cols=225 Identities=24% Similarity=0.304 Sum_probs=167.6
Q ss_pred eEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccCC
Q 006639 96 DMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFP 175 (637)
Q Consensus 96 dV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 175 (637)
+|+||+|| |+++.+.+++.|++.++|| +++|+|+|||++|.|.....+
T Consensus 1 siiip~~n---e~~~~l~~~l~sl~~q~~~--~~eiiVvdd~s~D~t~~~~i~--------------------------- 48 (236)
T cd06435 1 SIHVPCYE---EPPEMVKETLDSLAALDYP--NFEVIVIDNNTKDEALWKPVE--------------------------- 48 (236)
T ss_pred CeeEeeCC---CcHHHHHHHHHHHHhCCCC--CcEEEEEeCCCCchhHHHHHH---------------------------
Confidence 48999999 8778999999999999999 689999999999976421111
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeEEE
Q 006639 176 DSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVY 255 (637)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l~Y 255 (637)
+++.+. + +++.+
T Consensus 49 ------------------------~~~~~~-------------~-------------------------------~~i~~ 60 (236)
T cd06435 49 ------------------------AHCAQL-------------G-------------------------------ERFRF 60 (236)
T ss_pred ------------------------HHHHHh-------------C-------------------------------CcEEE
Confidence 010110 0 11344
Q ss_pred EeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccccCcchh
Q 006639 256 ISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN 335 (637)
Q Consensus 256 v~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~D~~~~ 335 (637)
+..++++ ++|+||+|.|++.. ..++|||+++|+|.++ .|++|.+++.+|.+ +++++|++++.+.+.-.+
T Consensus 61 i~~~~~~----G~~~~a~n~g~~~a--~~~~d~i~~lD~D~~~-~~~~l~~l~~~~~~----~~~~~v~~~~~~~~~~~~ 129 (236)
T cd06435 61 FHVEPLP----GAKAGALNYALERT--APDAEIIAVIDADYQV-EPDWLKRLVPIFDD----PRVGFVQAPQDYRDGEES 129 (236)
T ss_pred EEcCCCC----CCchHHHHHHHHhc--CCCCCEEEEEcCCCCc-CHHHHHHHHHHhcC----CCeeEEecCccccCCCcc
Confidence 5544333 46999999999941 2358999999999985 89999999998853 679999998766532211
Q ss_pred ---------hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHHhhcC
Q 006639 336 ---------LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEG 406 (637)
Q Consensus 336 ---------~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~~~~g 406 (637)
...++..........+..++.|+++++||+++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~-------------------------------------- 171 (236)
T cd06435 130 LFKRMCYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSALD-------------------------------------- 171 (236)
T ss_pred HHHHHHhHHHHHHHHHHhccccccCceEEecceEEEEHHHHH--------------------------------------
Confidence 111122222223333445567888889999873
Q ss_pred CcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCCHHHHH
Q 006639 407 KTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGM 486 (637)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~ 486 (637)
++| ||+.....||+++++|++.+||++.|++ .+.+++..|+|+.+++
T Consensus 172 -----------------~iG--------------gf~~~~~~eD~dl~~r~~~~G~~~~~~~--~~~~~~~~~~~~~~~~ 218 (236)
T cd06435 172 -----------------DVG--------------GWDEWCITEDSELGLRMHEAGYIGVYVA--QSYGHGLIPDTFEAFK 218 (236)
T ss_pred -----------------HhC--------------CCCCccccchHHHHHHHHHCCcEEEEcc--hhhccCcCcccHHHHH
Confidence 354 6888889999999999999999999996 3578999999999999
Q ss_pred HHHHHHHhhhhHHHHh
Q 006639 487 RQQKRWATGLLEILFS 502 (637)
Q Consensus 487 ~QR~RWa~G~~qil~~ 502 (637)
+||.||++|++|++.+
T Consensus 219 ~q~~rw~~g~~~~~~~ 234 (236)
T cd06435 219 KQRFRWAYGAVQILKK 234 (236)
T ss_pred HHHHHHhcchhhhhhc
Confidence 9999999999999864
No 25
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=99.95 E-value=3.1e-28 Score=243.07 Aligned_cols=220 Identities=22% Similarity=0.279 Sum_probs=140.2
Q ss_pred CceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCc
Q 006639 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (637)
Q Consensus 93 P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 172 (637)
|.|+|+||+|| |+. .+.+||.|+++++|| +++|+|+||++++.|.+.+.+..
T Consensus 1 P~v~Vvip~~~---~~~-~l~~~l~sl~~~~~~--~~~v~vvd~~~~~~~~~~~~~~~---------------------- 52 (228)
T PF13641_consen 1 PRVSVVIPAYN---EDD-VLRRCLESLLAQDYP--RLEVVVVDDGSDDETAEILRALA---------------------- 52 (228)
T ss_dssp --EEEE--BSS----HH-HHHHHHHHHTTSHHH--TEEEEEEEE-SSS-GCTTHHHHH----------------------
T ss_pred CEEEEEEEecC---CHH-HHHHHHHHHHcCCCC--CeEEEEEECCCChHHHHHHHHHH----------------------
Confidence 78999999999 764 999999999999997 79999999999987644333210
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCe
Q 006639 173 YFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPH 252 (637)
Q Consensus 173 yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~ 252 (637)
++ +|. -.
T Consensus 53 ------------------------------~~---------------------------~~~----------------~~ 59 (228)
T PF13641_consen 53 ------------------------------AR---------------------------YPR----------------VR 59 (228)
T ss_dssp ------------------------------HT---------------------------TGG-----------------G
T ss_pred ------------------------------HH---------------------------cCC----------------Cc
Confidence 00 000 01
Q ss_pred EEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccccC-
Q 006639 253 LVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYD- 331 (637)
Q Consensus 253 l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~D- 331 (637)
+.++.+.+++| ..+|++|+|.+++ ..++|+|+++|+|.++ +|++|.+++.+|.+ +++++||++..+++
T Consensus 60 v~vi~~~~~~g--~~~k~~a~n~~~~----~~~~d~i~~lD~D~~~-~p~~l~~~~~~~~~----~~~~~v~~~~~~~~~ 128 (228)
T PF13641_consen 60 VRVIRRPRNPG--PGGKARALNEALA----AARGDYILFLDDDTVL-DPDWLERLLAAFAD----PGVGAVGGPVFPDND 128 (228)
T ss_dssp EEEEE----HH--HHHHHHHHHHHHH----H---SEEEEE-SSEEE--CHHHHHHHHHHHB----SS--EEEEEEEETTC
T ss_pred eEEeecCCCCC--cchHHHHHHHHHH----hcCCCEEEEECCCcEE-CHHHHHHHHHHHHh----CCCCeEeeeEeecCC
Confidence 35555543222 1369999999999 6789999999999995 89999999999954 67999997775541
Q ss_pred --cchh-hHhHhh----hhhhhhcccCCceeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHHhh
Q 006639 332 --RPEN-LCILNE----YIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTL 404 (637)
Q Consensus 332 --~~~~-~~~f~~----~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~~~ 404 (637)
.+.. ...++. ....+....+..+++|+++++||+++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~~~------------------------------------ 172 (228)
T PF13641_consen 129 RNWLTRLQDLFFARWHLRFRSGRRALGVAFLSGSGMLFRRSALE------------------------------------ 172 (228)
T ss_dssp CCEEEE-TT--S-EETTTS-TT-B----S-B--TEEEEEHHHHH------------------------------------
T ss_pred CCHHHHHHHHHHhhhhhhhhhhhcccceeeccCcEEEEEHHHHH------------------------------------
Confidence 1111 222211 123344445556678999999999883
Q ss_pred cCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCCHHH
Q 006639 405 EGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPA 484 (637)
Q Consensus 405 ~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~tl~~ 484 (637)
++| ||++....||.++++++.++||++.|++ .+.++.+.|.|+++
T Consensus 173 -------------------~~g--------------~fd~~~~~eD~~l~~r~~~~G~~~~~~~--~~~v~~~~~~~~~~ 217 (228)
T PF13641_consen 173 -------------------EVG--------------GFDPFILGEDFDLCLRLRAAGWRIVYAP--DALVYHEEPSSLKA 217 (228)
T ss_dssp -------------------HH---------------S--SSSSSHHHHHHHHHHHTT--EEEEE--EEEEEE--SSSTHH
T ss_pred -------------------HhC--------------CCCCCCcccHHHHHHHHHHCCCcEEEEC--CcEEEEeCCCCHHH
Confidence 343 6888888999999999999999999996 47899999999999
Q ss_pred HHHHHHHHHhh
Q 006639 485 GMRQQKRWATG 495 (637)
Q Consensus 485 ~~~QR~RWa~G 495 (637)
+++||.||++|
T Consensus 218 ~~~q~~RW~~g 228 (228)
T PF13641_consen 218 FFKQRFRWSRG 228 (228)
T ss_dssp HHHHHHHHH--
T ss_pred HHHHHhccCcC
Confidence 99999999988
No 26
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=99.94 E-value=1.1e-24 Score=236.20 Aligned_cols=224 Identities=13% Similarity=0.140 Sum_probs=160.4
Q ss_pred CCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccC
Q 006639 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRA 169 (637)
Q Consensus 90 ~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~ 169 (637)
+..|+|+|+||+|| |+. .+.+|+.|++++||| .++|+|+||+++|.|.+.+.+..
T Consensus 38 ~~~p~VSViiP~~n---ee~-~l~~~L~Sl~~q~Yp--~~EIivvdd~s~D~t~~iv~~~~------------------- 92 (373)
T TIGR03472 38 RAWPPVSVLKPLHG---DEP-ELYENLASFCRQDYP--GFQMLFGVQDPDDPALAVVRRLR------------------- 92 (373)
T ss_pred CCCCCeEEEEECCC---CCh-hHHHHHHHHHhcCCC--CeEEEEEeCCCCCcHHHHHHHHH-------------------
Confidence 45799999999999 553 789999999999999 59999999999997754443210
Q ss_pred CCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCC
Q 006639 170 PFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDE 249 (637)
Q Consensus 170 p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 249 (637)
+ +||.
T Consensus 93 ---------------------------------~---------------------------~~p~--------------- 97 (373)
T TIGR03472 93 ---------------------------------A---------------------------DFPD--------------- 97 (373)
T ss_pred ---------------------------------H---------------------------hCCC---------------
Confidence 0 0111
Q ss_pred CCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccc
Q 006639 250 IPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYF 329 (637)
Q Consensus 250 ~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f 329 (637)
.++.++...++.| .++|++|+|++++ .+++|+++++|||.++ +||+|++++..|.| ++++.|+++...
T Consensus 98 -~~i~~v~~~~~~G--~~~K~~~l~~~~~----~a~ge~i~~~DaD~~~-~p~~L~~lv~~~~~----~~v~~V~~~~~~ 165 (373)
T TIGR03472 98 -ADIDLVIDARRHG--PNRKVSNLINMLP----HARHDILVIADSDISV-GPDYLRQVVAPLAD----PDVGLVTCLYRG 165 (373)
T ss_pred -CceEEEECCCCCC--CChHHHHHHHHHH----hccCCEEEEECCCCCc-ChhHHHHHHHHhcC----CCcceEeccccC
Confidence 1134444333333 3579999999988 7899999999999995 89999999999964 579999976432
Q ss_pred c--Ccchh--hHh-----HhhhhhhhhcccC-CceeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHH
Q 006639 330 Y--DRPEN--LCI-----LNEYIGKGIVGIQ-GPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKS 399 (637)
Q Consensus 330 ~--D~~~~--~~~-----f~~~~~~g~d~~~-~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s 399 (637)
. +.+.+ ... |+...... +..+ ..++.|++.++||+++.
T Consensus 166 ~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~a~RR~~l~------------------------------- 213 (373)
T TIGR03472 166 RPVPGFWSRLGAMGINHNFLPSVMVA-RALGRARFCFGATMALRRATLE------------------------------- 213 (373)
T ss_pred CCCCCHHHHHHHHHhhhhhhHHHHHH-HhccCCccccChhhheeHHHHH-------------------------------
Confidence 2 11211 111 11111111 1112 23456777788888773
Q ss_pred HHHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccC--cccchhHHHHHHHHhCCCeEEEeCCCCceeeec
Q 006639 400 AAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLY--GATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGC 477 (637)
Q Consensus 400 ~~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~--~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~ 477 (637)
++| ||+. ++++||++++.++.++||++.|.+ .+.....
T Consensus 214 ------------------------~iG--------------Gf~~~~~~~~ED~~l~~~i~~~G~~v~~~~--~~v~~~~ 253 (373)
T TIGR03472 214 ------------------------AIG--------------GLAALAHHLADDYWLGELVRALGLRVVLAP--VVVDTDV 253 (373)
T ss_pred ------------------------HcC--------------ChHHhcccchHHHHHHHHHHHcCCeEEecc--hhhhcCC
Confidence 344 6764 578999999999999999999985 3567788
Q ss_pred cCCCHHHHHHHHHHHHhhhh
Q 006639 478 ASPSGPAGMRQQKRWATGLL 497 (637)
Q Consensus 478 aP~tl~~~~~QR~RWa~G~~ 497 (637)
.|+|++++++||.||++...
T Consensus 254 ~~~s~~~~~~q~~RW~r~~~ 273 (373)
T TIGR03472 254 HETSFATLLAHELRWSRTIR 273 (373)
T ss_pred CccCHHHHHHHHHHHHhhhh
Confidence 88999999999999985544
No 27
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=99.94 E-value=1.3e-26 Score=236.57 Aligned_cols=168 Identities=13% Similarity=0.028 Sum_probs=113.2
Q ss_pred HHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccccCcchh-hHhHhh--------h
Q 006639 272 AMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPEN-LCILNE--------Y 342 (637)
Q Consensus 272 aLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~D~~~~-~~~f~~--------~ 342 (637)
++|.++. .+++|||+++|||.++ +|++|++++.+|. .+|++|.|+..+...++..+ ...+.. .
T Consensus 64 ~~~~~~~----~a~~e~i~~~DaD~~~-~~~~l~~l~~~~~---~~p~vg~v~g~~~~~~~~~~~~~~~q~~ey~~~~~~ 135 (244)
T cd04190 64 YFCRVLF----PDDPEFILLVDADTKF-DPDSIVQLYKAMD---KDPEIGGVCGEIHPMGKKQGPLVMYQVFEYAISHWL 135 (244)
T ss_pred HHHHHhh----cCCCCEEEEECCCCcC-CHhHHHHHHHHHH---hCCCEEEEEeeeEEcCCcchhHHHhHheehhhhhhh
Confidence 4566666 6899999999999995 8999999999996 35789999988766533222 111111 1
Q ss_pred hhhhhcccCCc-eeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHH
Q 006639 343 IGKGIVGIQGP-FYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDE 421 (637)
Q Consensus 343 ~~~g~d~~~~~-~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~~~~g~~~~~~~~~~~~~~~ 421 (637)
...+.+..+.. +..|++.++|++++....... +
T Consensus 136 ~~~~~s~~g~~~~~~G~~~~~R~~~l~~~~~~~-~--------------------------------------------- 169 (244)
T cd04190 136 DKAFESVFGFVTCLPGCFSMYRIEALKGDNGGK-G--------------------------------------------- 169 (244)
T ss_pred cccHHHcCCceEECCCceEEEEehhhcCCcccc-c---------------------------------------------
Confidence 11222333433 345888899999986421000 0
Q ss_pred HhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEE--eCCCCceeeeccCCCHHHHHHHHHHHHhhhhH
Q 006639 422 AHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGY--CLPIPHAFLGCASPSGPAGMRQQKRWATGLLE 498 (637)
Q Consensus 422 ~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y--~~~~~~~~~g~aP~tl~~~~~QR~RWa~G~~q 498 (637)
..+.++|...+.-. ..+....+++||++++++|..+||++.| ++ .+.+++++|+|++++++||+||++|++.
T Consensus 170 --~~~~~~~~~~~~~~-~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~--~a~~~~~~p~s~~~~~~QR~RW~~g~~~ 243 (244)
T cd04190 170 --PLLDYAYLTNTVDS-LHKKNNLDLGEDRILCTLLLKAGPKRKYLYVP--GAVAETDVPETFVELLSQRRRWINSTIA 243 (244)
T ss_pred --cchhhccccCcccc-hHHHHHHhHhcccceeHHHhccCCccEEEEec--ccEEEEECCCCHHHHHHHhHhhhccccc
Confidence 00000000000000 0134456799999999999999999999 75 4789999999999999999999999874
No 28
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=99.93 E-value=6.5e-24 Score=243.01 Aligned_cols=233 Identities=15% Similarity=0.145 Sum_probs=164.8
Q ss_pred cCCCCceeEEEecCCCCCCchHHHHHHHHHHH-cCCCCCCCeEEEE---ecCCCCcchHHHHHHHHhhhhhhhhhhhhcc
Q 006639 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLL-AVDYPVHKLACYV---SDDACSPLNFYSLVEASKFAKLWVPFCKKYN 164 (637)
Q Consensus 89 ~~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l-~ldYP~~kl~vyv---~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~ 164 (637)
..+.|.|+|+||+|| |. +++.+||.+++ .+||| +++|+| .|||. |.+++.+..
T Consensus 67 ~~~~~~vsIlVPa~n---E~-~VI~~~v~~ll~~ldYp--~~~I~v~~~~nD~~---T~~~~~~~~-------------- 123 (703)
T PRK15489 67 ERDEQPLAIMVPAWK---EY-DVIAKMIENMLATLDYR--RYVIFVGTYPNDAE---TITEVERMR-------------- 123 (703)
T ss_pred ccCCCceEEEEeCCC---cH-HHHHHHHHHHHhcCCCC--CeEEEEEecCCCcc---HHHHHHHHh--------------
Confidence 456799999999999 65 69999999987 89999 789999 57774 433333210
Q ss_pred ccccCCCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCC
Q 006639 165 VQIRAPFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKG 244 (637)
Q Consensus 165 v~~r~p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~ 244 (637)
..
T Consensus 124 -----------------------------------------------------------------~~------------- 125 (703)
T PRK15489 124 -----------------------------------------------------------------RR------------- 125 (703)
T ss_pred -----------------------------------------------------------------cc-------------
Confidence 01
Q ss_pred CCCCCCCeEEEEeccCCCCCCCCCchHHHHHHHHhc---CCCCCCCE--EEEecCCCCCCchHHHHHHHHHhhccCCCCc
Q 006639 245 GLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVS---GLMTNAPF--MLNVDCDMYANNPEIVLQAMCLHLGSKNENE 319 (637)
Q Consensus 245 ~~~~~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s---~~~s~~e~--i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~ 319 (637)
+|++..|...+. ...+||.|||+++... .-...++| |+++|||.+ |+|+.|+.+ -++.+ ++
T Consensus 126 -----~p~~~~v~~~~~---gp~gKa~ALN~~l~~~~~~e~~~~~~fa~vvi~DAEd~-~~P~~L~~~-~~~~~---~~- 191 (703)
T PRK15489 126 -----YKRLVRVEVPHD---GPTCKADCLNWIIQAIFRYEAGHGIEFAGVILHDSEDV-LHPLELKYF-NYLLP---RK- 191 (703)
T ss_pred -----CCcEEEEEcCCC---CCCCHHHHHHHHHHHHHhhhhhccCccceEEEEcCCCC-CChhHHHHH-HhhcC---Cc-
Confidence 122333333221 2358999999999741 00123344 999999998 699999764 67763 23
Q ss_pred EEEEeCCcccc-Ccchh---------hHhHhhhhhhhhcccCCcee-eccCceeechhhhccccchhhccccchHHHHHH
Q 006639 320 FAFIQSPQYFY-DRPEN---------LCILNEYIGKGIVGIQGPFY-QGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLK 388 (637)
Q Consensus 320 va~VQtPq~f~-D~~~~---------~~~f~~~~~~g~d~~~~~~~-~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~ 388 (637)
.+||.|-.=. ++..+ ....++..+.++...++++. -|||+.+||++|..+
T Consensus 192 -~~iQ~pV~~~~~~~~~~l~~~~~~Efa~~~~~~l~~r~~l~~~ipl~Gv~~~frr~aL~~l------------------ 252 (703)
T PRK15489 192 -DLVQLPVLSLERKWYEWVAGTYMDEFAEWHQKDLVVRESLTGTVPSAGVGTCFSRRALLAL------------------ 252 (703)
T ss_pred -ceeeeeeccCCCccccHHHHHHHHHHHHHhhhHHHHHHHcCCceeccCcceeeeHHHHHHH------------------
Confidence 3689773211 22222 34556677888888988876 489999999998411
Q ss_pred hhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeC
Q 006639 389 KFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCL 468 (637)
Q Consensus 389 ~~g~s~~~i~s~~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~ 468 (637)
.+.|+ -.||+.+++|||+++|+||+.+|||+.|+.
T Consensus 253 ----------------------------------~~~gg-----------~~~~n~~sLTED~Dlg~RL~~~G~r~~f~~ 287 (703)
T PRK15489 253 ----------------------------------MKERG-----------NQPFNTSSLTEDYDFSFRLAELGMQEIFVR 287 (703)
T ss_pred ----------------------------------HHhcC-----------CCCCCCCCchHhHHHHHHHHHCCCceEEEE
Confidence 12221 026889999999999999999999999921
Q ss_pred ---------------------CCCceeeeccCCCHHHHHHHHHHHHhhhh-HHH
Q 006639 469 ---------------------PIPHAFLGCASPSGPAGMRQQKRWATGLL-EIL 500 (637)
Q Consensus 469 ---------------------~~~~~~~g~aP~tl~~~~~QR~RWa~G~~-qil 500 (637)
....+..+..|.|+++.++||.||..|-. |-.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~tre~fP~~~~a~~rQk~RW~~Gi~~q~~ 341 (703)
T PRK15489 288 FPVQFRVRRTSWFGPRRERTREMLLCVREYFPDTFRTAYRQKARWVLGIAFQGW 341 (703)
T ss_pred EeccccccccccccccccccccCceeehhhCcHHHHHHHHHHHHHHhHHHHhhH
Confidence 01357789999999999999999999987 875
No 29
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=99.92 E-value=1.7e-24 Score=212.70 Aligned_cols=193 Identities=17% Similarity=0.170 Sum_probs=149.9
Q ss_pred CceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCc
Q 006639 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (637)
Q Consensus 93 P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 172 (637)
|.|+|+||+|| |.. .+.++|.|+++++|| .++|+|+|||++|.|.+.+.+..+ +
T Consensus 1 p~vsviip~~n---~~~-~l~~~L~sl~~q~~~--~~eiivVdd~s~d~t~~~~~~~~~----------~---------- 54 (196)
T cd02520 1 PGVSILKPLCG---VDP-NLYENLESFFQQDYP--KYEILFCVQDEDDPAIPVVRKLIA----------K---------- 54 (196)
T ss_pred CCeEEEEecCC---CCc-cHHHHHHHHHhccCC--CeEEEEEeCCCcchHHHHHHHHHH----------H----------
Confidence 78999999999 543 589999999999999 599999999999987655443110 0
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCe
Q 006639 173 YFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPH 252 (637)
Q Consensus 173 yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~ 252 (637)
||.. +
T Consensus 55 -----------------------------------------------------------~~~~----------------~ 59 (196)
T cd02520 55 -----------------------------------------------------------YPNV----------------D 59 (196)
T ss_pred -----------------------------------------------------------CCCC----------------c
Confidence 0000 1
Q ss_pred EEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccccCc
Q 006639 253 LVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDR 332 (637)
Q Consensus 253 l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~D~ 332 (637)
+.++...++.| ..+|++|+|.|++ .+++||++++|+|..+ +|++|.+++..+.+ +++++|+.
T Consensus 60 ~~~~~~~~~~g--~~~~~~~~n~g~~----~a~~d~i~~~D~D~~~-~~~~l~~l~~~~~~----~~~~~v~~------- 121 (196)
T cd02520 60 ARLLIGGEKVG--INPKVNNLIKGYE----EARYDILVISDSDISV-PPDYLRRMVAPLMD----PGVGLVTC------- 121 (196)
T ss_pred EEEEecCCcCC--CCHhHHHHHHHHH----hCCCCEEEEECCCceE-ChhHHHHHHHHhhC----CCCCeEEe-------
Confidence 23333332222 2368999999999 7899999999999985 89999999999864 45777762
Q ss_pred chhhHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHHhhcCCcCCCC
Q 006639 333 PENLCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYS 412 (637)
Q Consensus 333 ~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~~~~g~~~~~~ 412 (637)
.+..|+++++||+++.
T Consensus 122 --------------------~~~~g~~~~~r~~~~~-------------------------------------------- 137 (196)
T cd02520 122 --------------------LCAFGKSMALRREVLD-------------------------------------------- 137 (196)
T ss_pred --------------------ecccCceeeeEHHHHH--------------------------------------------
Confidence 1567888999999883
Q ss_pred CchhhhHHHHhHhhcccccccccccccccccC--cccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCCHHHHHHHHH
Q 006639 413 SNISRSLDEAHRVADCGYEYGSSWGDEVGCLY--GATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQK 490 (637)
Q Consensus 413 ~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~--~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~QR~ 490 (637)
++| ||+. ..+.||+++++++..+||++.|.+ .+.++.+.|.+++++++||.
T Consensus 138 -----------~~g--------------gf~~~~~~~~eD~~l~~rl~~~G~~i~~~~--~~~~~~~~~~~~~~~~~q~~ 190 (196)
T cd02520 138 -----------AIG--------------GFEAFADYLAEDYFLGKLIWRLGYRVVLSP--YVVMQPLGSTSLASFWRRQL 190 (196)
T ss_pred -----------hcc--------------ChHHHhHHHHHHHHHHHHHHHcCCeEEEcc--hheeccCCcccHHHHHHHHH
Confidence 233 5653 356899999999999999999985 36889999999999999999
Q ss_pred HHHhh
Q 006639 491 RWATG 495 (637)
Q Consensus 491 RWa~G 495 (637)
||++.
T Consensus 191 rw~~~ 195 (196)
T cd02520 191 RWSRT 195 (196)
T ss_pred HHhcc
Confidence 99863
No 30
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.92 E-value=9.1e-24 Score=209.60 Aligned_cols=218 Identities=16% Similarity=0.201 Sum_probs=157.6
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccCCC
Q 006639 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (637)
Q Consensus 97 V~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 176 (637)
|+||+|| |+ +.+.+||.|++.++||.++++|+|+|||+++.|.+.+.....
T Consensus 1 viip~~n---~~-~~l~~~l~sl~~q~~~~~~~eiivvdd~s~d~t~~~~~~~~~------------------------- 51 (229)
T cd04192 1 VVIAARN---EA-ENLPRLLQSLSALDYPKEKFEVILVDDHSTDGTVQILEFAAA------------------------- 51 (229)
T ss_pred CEEEecC---cH-HHHHHHHHHHHhCCCCCCceEEEEEcCCCCcChHHHHHHHHh-------------------------
Confidence 6899999 75 689999999999999987899999999999987544331000
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeEEEE
Q 006639 177 SEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYI 256 (637)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l~Yv 256 (637)
...+++.++
T Consensus 52 -----------------------------------------------------------------------~~~~~v~~~ 60 (229)
T cd04192 52 -----------------------------------------------------------------------KPNFQLKIL 60 (229)
T ss_pred -----------------------------------------------------------------------CCCcceEEe
Confidence 001224444
Q ss_pred eccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcccc--Ccch
Q 006639 257 SREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--DRPE 334 (637)
Q Consensus 257 ~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~--D~~~ 334 (637)
.++. ....+|+.|+|.|++ .+++|||+++|+|.++ .|++|.+++.+|.+ +..+.|+.++.+. +.+.
T Consensus 61 ~~~~---~~~~g~~~a~n~g~~----~~~~d~i~~~D~D~~~-~~~~l~~l~~~~~~----~~~~~v~~~~~~~~~~~~~ 128 (229)
T cd04192 61 NNSR---VSISGKKNALTTAIK----AAKGDWIVTTDADCVV-PSNWLLTFVAFIQK----EQIGLVAGPVIYFKGKSLL 128 (229)
T ss_pred eccC---cccchhHHHHHHHHH----HhcCCEEEEECCCccc-CHHHHHHHHHHhhc----CCCcEEeeeeeecCCccHH
Confidence 4432 123689999999999 7899999999999985 89999999998864 3466777776654 2111
Q ss_pred ----h-hHhHhhhhhhhhcccCCc-eeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHHhhcCCc
Q 006639 335 ----N-LCILNEYIGKGIVGIQGP-FYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKT 408 (637)
Q Consensus 335 ----~-~~~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~~~~g~~ 408 (637)
. ...+......+..+.+.+ .++|++.++||+++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~---------------------------------------- 168 (229)
T cd04192 129 AKFQRLDWLSLLGLIAGSFGLGKPFMCNGANMAYRKEAFF---------------------------------------- 168 (229)
T ss_pred HHHHHHHHHHHHHHHhhHHHhcCccccccceEEEEHHHHH----------------------------------------
Confidence 1 111111122222233333 446777788888773
Q ss_pred CCCCCchhhhHHHHhHhhcccccccccccccccccC--cccchhHHHHHHHHhCCC-eEEEeCCCCceeeeccCCCHHHH
Q 006639 409 GGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLY--GATAEDNLTGLVIHSKGW-RSGYCLPIPHAFLGCASPSGPAG 485 (637)
Q Consensus 409 ~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~--~sltED~~ts~rl~~~Gw-r~~y~~~~~~~~~g~aP~tl~~~ 485 (637)
++| ||++ ...+||.++.+++.++|| ++.|.+.....++...|.+++++
T Consensus 169 ---------------~~g--------------gf~~~~~~~~eD~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (229)
T cd04192 169 ---------------EVG--------------GFEGNDHIASGDDELLLAKVASKYPKVAYLKNPEALVTTQPVTSWKEL 219 (229)
T ss_pred ---------------Hhc--------------CCccccccccCCHHHHHHHHHhCCCCEEEeeCcchheecCCchhHHHH
Confidence 354 6864 467899999999999999 99887422467889999999999
Q ss_pred HHHHHHHHhh
Q 006639 486 MRQQKRWATG 495 (637)
Q Consensus 486 ~~QR~RWa~G 495 (637)
++||.||++|
T Consensus 220 ~~q~~Rw~~g 229 (229)
T cd04192 220 LNQRKRWASK 229 (229)
T ss_pred HHHHHHhhcC
Confidence 9999999988
No 31
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=99.90 E-value=4.2e-23 Score=206.79 Aligned_cols=224 Identities=16% Similarity=0.123 Sum_probs=156.6
Q ss_pred ceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCcc
Q 006639 94 PVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRY 173 (637)
Q Consensus 94 ~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~y 173 (637)
+|+|+||||| |+++.+.+|+.|+.+++ | .+|+|+|||+++.|.+.+.+..
T Consensus 1 ~isVvIp~~n---e~~~~l~~~l~sl~~q~-~---~eiivvdd~s~d~~~~~l~~~~----------------------- 50 (235)
T cd06434 1 DVTVIIPVYD---EDPDVFRECLRSILRQK-P---LEIIVVTDGDDEPYLSILSQTV----------------------- 50 (235)
T ss_pred CeEEEEeecC---CChHHHHHHHHHHHhCC-C---CEEEEEeCCCChHHHHHHHhhc-----------------------
Confidence 5899999999 87779999999999998 4 5799999999997644432100
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeE
Q 006639 174 FPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHL 253 (637)
Q Consensus 174 f~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l 253 (637)
.+ +.+
T Consensus 51 ---------------------------------------------------------~~------------------~~~ 55 (235)
T cd06434 51 ---------------------------------------------------------KY------------------GGI 55 (235)
T ss_pred ---------------------------------------------------------cC------------------CcE
Confidence 00 112
Q ss_pred EEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccccCc-
Q 006639 254 VYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDR- 332 (637)
Q Consensus 254 ~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~D~- 332 (637)
.++. ++ +.+|++|+|.|++ .+++|||+++|+|.++ +|++|++++.+|.+ ++++.|+..+.+++.
T Consensus 56 ~v~~-~~-----~~g~~~a~n~g~~----~a~~d~v~~lD~D~~~-~~~~l~~l~~~~~~----~~v~~v~~~~~~~~~~ 120 (235)
T cd06434 56 FVIT-VP-----HPGKRRALAEGIR----HVTTDIVVLLDSDTVW-PPNALPEMLKPFED----PKVGGVGTNQRILRPR 120 (235)
T ss_pred EEEe-cC-----CCChHHHHHHHHH----HhCCCEEEEECCCcee-ChhHHHHHHHhccC----CCEeEEcCceEeecCc
Confidence 2332 22 3479999999999 6899999999999995 89999999999973 679999988877632
Q ss_pred ---chh-hHhHhhh----hhhhhcccCCc-eeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHHh
Q 006639 333 ---PEN-LCILNEY----IGKGIVGIQGP-FYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQT 403 (637)
Q Consensus 333 ---~~~-~~~f~~~----~~~g~d~~~~~-~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~~ 403 (637)
+.. ...++.. ........++. +..|...++||+++....... .|.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l~~~~~~~--------------------~~~------ 174 (235)
T cd06434 121 DSKWSFLAAEYLERRNEEIRAAMSYDGGVPCLSGRTAAYRTEILKDFLFLE--------------------EFT------ 174 (235)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhCCCEEEccCcHHHHHHHHHhhhhhHH--------------------Hhh------
Confidence 111 1111111 11122222332 234666678888884211000 000
Q ss_pred hcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCCHH
Q 006639 404 LEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGP 483 (637)
Q Consensus 404 ~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~tl~ 483 (637)
.+.+ |.......||.+++.+++.+||++.|.+ .+.++...|.|++
T Consensus 175 -------------------~~~~--------------~~~~~~~~eD~~l~~~~~~~g~~~~~~~--~~~~~~~~~~~~~ 219 (235)
T cd06434 175 -------------------NETF--------------MGRRLNAGDDRFLTRYVLSHGYKTVYQY--TSEAYTETPENYK 219 (235)
T ss_pred -------------------hhhh--------------cCCCCCcCchHHHHHHHHHCCCeEEEec--CCeEEEEcchhHH
Confidence 0111 1223468899999999999999999996 3678889999999
Q ss_pred HHHHHHHHHHhhhhH
Q 006639 484 AGMRQQKRWATGLLE 498 (637)
Q Consensus 484 ~~~~QR~RWa~G~~q 498 (637)
++++||.||++|+.+
T Consensus 220 ~~~~q~~Rw~~~~~~ 234 (235)
T cd06434 220 KFLKQQLRWSRSNWR 234 (235)
T ss_pred HHHHHhhhhhhcccC
Confidence 999999999999864
No 32
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.90 E-value=1.6e-20 Score=201.67 Aligned_cols=217 Identities=15% Similarity=0.146 Sum_probs=165.2
Q ss_pred eEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcccc-
Q 006639 252 HLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY- 330 (637)
Q Consensus 252 ~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~- 330 (637)
++.|..|.+ |.+.||||+....+.= -+.++|++|+|||+++ ..|.+-+++..+. .+|+.|.+||--.-.
T Consensus 213 ~ifYRrRr~----n~~RKaGNIaDfcrRw--G~~Y~~MlVLDADSvM-tgd~lvrLv~~ME---~~P~aGlIQt~P~~~g 282 (736)
T COG2943 213 NIFYRRRRR----NVKRKAGNIADFCRRW--GSAYSYMLVLDADSVM-TGDCLVRLVRLME---ANPDAGLIQTSPKASG 282 (736)
T ss_pred ceeeehHhh----hhcccccCHHHHHHHh--CcccceEEEeeccccc-CchHHHHHHHHHh---hCCCCceeecchhhcC
Confidence 357776654 3458999999998853 4889999999999998 7999999999887 679999999743333
Q ss_pred --Ccchh-----hHhHhhhhhhhhcccCCc--eeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHH
Q 006639 331 --DRPEN-----LCILNEYIGKGIVGIQGP--FYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAA 401 (637)
Q Consensus 331 --D~~~~-----~~~f~~~~~~g~d~~~~~--~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~ 401 (637)
..|+. .+++-.+...|+..|++. -|.|.|+++|-+++..-+
T Consensus 283 g~TL~AR~qQFatrvYGpl~~~GLawW~~~Es~yWGHNAIIRt~aF~~hc------------------------------ 332 (736)
T COG2943 283 GDTLYARCQQFATRVYGPLFTAGLAWWQLGESHYWGHNAIIRTKAFIEHC------------------------------ 332 (736)
T ss_pred cchHHHHHHHHHHHHhchHHhhhhHHHhccccccccccceeechhhHHhc------------------------------
Confidence 23333 345556778889888875 679999999999883110
Q ss_pred HhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCC
Q 006639 402 QTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPS 481 (637)
Q Consensus 402 ~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~t 481 (637)
|.+..+| ++.|-+..++.|+..+-.|.+.||-+--. ++-.-+++|.|.|
T Consensus 333 ----gLp~LpG--------------------------~~pFgG~ilSHDfvEAALmRRaGW~v~ia-~dL~GSyEE~Ppn 381 (736)
T COG2943 333 ----GLPPLPG--------------------------RGPFGGHILSHDFVEAALMRRAGWGVWIA-YDLDGSYEELPPN 381 (736)
T ss_pred ----CCCCCCC--------------------------CCCCCccccchHHHHHHHHhhcCceEEEe-ccCCCchhhCCch
Confidence 1111111 12477788999999999999999965544 3345789999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHhhcchhhhcccCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 006639 482 GPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYC 546 (637)
Q Consensus 482 l~~~~~QR~RWa~G~~qil~~~~~p~~~~~~~~L~~~qrl~yl~~~~~~~~~l~~l~~~l~P~l~ 546 (637)
+-+++++-+|||+||+|-+ +++.. ++|.+..|++++..++.|+.+...++++++-.+.
T Consensus 382 LlD~l~RDRRWC~GNLqh~-----rl~~~--~GlHwvsR~h~~tGVmsYlsaPlWfl~ll~g~al 439 (736)
T COG2943 382 LLDELKRDRRWCHGNLQHF-----RLFLV--KGLHWVSRAHFLTGVMSYLSAPLWFLFLLLGTAL 439 (736)
T ss_pred HHHHHhhhhHhhhcchhhc-----eeecc--CCccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999965 35553 8999999999999988887776666666554443
No 33
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=99.89 E-value=4.8e-21 Score=208.53 Aligned_cols=227 Identities=18% Similarity=0.096 Sum_probs=153.0
Q ss_pred cCCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhcccccc
Q 006639 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIR 168 (637)
Q Consensus 89 ~~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r 168 (637)
++..|+|+|+||+|| |+ +.+.+|+.|+++++||. +++|+|+||||+|.|.+.+.+..+
T Consensus 36 ~~~~p~VSVIIpa~N---e~-~~L~~~L~sL~~q~yp~-~~eIIVVDd~StD~T~~i~~~~~~----------------- 93 (384)
T TIGR03469 36 PEAWPAVVAVVPARN---EA-DVIGECVTSLLEQDYPG-KLHVILVDDHSTDGTADIARAAAR----------------- 93 (384)
T ss_pred CCCCCCEEEEEecCC---cH-hHHHHHHHHHHhCCCCC-ceEEEEEeCCCCCcHHHHHHHHHH-----------------
Confidence 467899999999999 65 58999999999999995 589999999999988655443110
Q ss_pred CCCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCC
Q 006639 169 APFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSD 248 (637)
Q Consensus 169 ~p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 248 (637)
+ +|
T Consensus 94 -----------------------------------~---------------------------~~--------------- 96 (384)
T TIGR03469 94 -----------------------------------A---------------------------YG--------------- 96 (384)
T ss_pred -----------------------------------h---------------------------cC---------------
Confidence 0 00
Q ss_pred CCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCC-----CCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEE
Q 006639 249 EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTN-----APFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFI 323 (637)
Q Consensus 249 ~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~-----~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~V 323 (637)
..+++.+++.+++| ....+|+.|+|.|++ .++ +|+++.+|||..+ +|+.|++++.++.++ ++++|
T Consensus 97 ~~~~i~vi~~~~~~-~g~~Gk~~A~n~g~~----~A~~~~~~gd~llflDaD~~~-~p~~l~~lv~~~~~~----~~~~v 166 (384)
T TIGR03469 97 RGDRLTVVSGQPLP-PGWSGKLWAVSQGIA----AARTLAPPADYLLLTDADIAH-GPDNLARLVARARAE----GLDLV 166 (384)
T ss_pred CCCcEEEecCCCCC-CCCcchHHHHHHHHH----HHhccCCCCCEEEEECCCCCC-ChhHHHHHHHHHHhC----CCCEE
Confidence 00123444433222 124589999999999 455 9999999999995 899999999999752 24444
Q ss_pred eCCcccc--Ccchh--h---HhHhhhhh---hhhccc-CCceeeccCceeechhhhccccchhhccccchHHHHHHhhCC
Q 006639 324 QSPQYFY--DRPEN--L---CILNEYIG---KGIVGI-QGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGN 392 (637)
Q Consensus 324 QtPq~f~--D~~~~--~---~~f~~~~~---~g~d~~-~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~ 392 (637)
....++. +.+.. . ..++.... ...+.. .....+|.+.++||+++.
T Consensus 167 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~lirr~~~~------------------------ 222 (384)
T TIGR03469 167 SLMVRLRCESFWEKLLIPAFVFFFQKLYPFRWVNDPRRRTAAAAGGCILIRREALE------------------------ 222 (384)
T ss_pred EecccccCCCHHHHHHHHHHHHHHHHhcchhhhcCCCccceeecceEEEEEHHHHH------------------------
Confidence 4322222 11111 0 01111100 011111 112345777788888773
Q ss_pred cHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccC--cccchhHHHHHHHHhCCCeEEEeCCC
Q 006639 393 SKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLY--GATAEDNLTGLVIHSKGWRSGYCLPI 470 (637)
Q Consensus 393 s~~~i~s~~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~--~sltED~~ts~rl~~~Gwr~~y~~~~ 470 (637)
++| ||+. ..+.||++++.++.++|+++.+...
T Consensus 223 -------------------------------~vG--------------Gf~~~~~~~~ED~~L~~r~~~~G~~v~~~~~- 256 (384)
T TIGR03469 223 -------------------------------RIG--------------GIAAIRGALIDDCTLAAAVKRSGGRIWLGLA- 256 (384)
T ss_pred -------------------------------HcC--------------CHHHHhhCcccHHHHHHHHHHcCCcEEEEec-
Confidence 344 5664 4689999999999999999999854
Q ss_pred CceeeeccCCCHHHHHHHHHHHHh
Q 006639 471 PHAFLGCASPSGPAGMRQQKRWAT 494 (637)
Q Consensus 471 ~~~~~g~aP~tl~~~~~QR~RWa~ 494 (637)
........-+++++.++|+.||..
T Consensus 257 ~~~~s~r~~~~~~~~~~~~~r~~~ 280 (384)
T TIGR03469 257 ARTRSLRPYDGLGEIWRMIARTAY 280 (384)
T ss_pred CceEEEEecCCHHHHHHHHHHhHH
Confidence 334445667799999999999953
No 34
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=99.89 E-value=7.8e-22 Score=200.01 Aligned_cols=220 Identities=16% Similarity=0.185 Sum_probs=156.2
Q ss_pred cCCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhcccccc
Q 006639 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIR 168 (637)
Q Consensus 89 ~~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r 168 (637)
.+..|.|+|+||+|| |+ ..+.+++.|+++++||.++++|+|+|||++|.|.+.+.+
T Consensus 25 ~~~~~~isVvip~~n---~~-~~l~~~l~si~~q~~~~~~~eiivvdd~s~d~t~~~~~~-------------------- 80 (251)
T cd06439 25 PAYLPTVTIIIPAYN---EE-AVIEAKLENLLALDYPRDRLEIIVVSDGSTDGTAEIARE-------------------- 80 (251)
T ss_pred CCCCCEEEEEEecCC---cH-HHHHHHHHHHHhCcCCCCcEEEEEEECCCCccHHHHHHH--------------------
Confidence 456899999999999 65 589999999999999987799999999999987544332
Q ss_pred CCCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCC
Q 006639 169 APFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSD 248 (637)
Q Consensus 169 ~p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 248 (637)
.. .
T Consensus 81 ------------------------------------~~------------~----------------------------- 83 (251)
T cd06439 81 ------------------------------------YA------------D----------------------------- 83 (251)
T ss_pred ------------------------------------Hh------------h-----------------------------
Confidence 00 0
Q ss_pred CCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcc
Q 006639 249 EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQY 328 (637)
Q Consensus 249 ~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~ 328 (637)
. ++.++..++ +.+|++|+|.|++ .+++|+|+++|+|.++ .|++|.+++..+.+ +++++|++...
T Consensus 84 ~--~v~~i~~~~-----~~g~~~a~n~gi~----~a~~d~i~~lD~D~~~-~~~~l~~l~~~~~~----~~~~~v~~~~~ 147 (251)
T cd06439 84 K--GVKLLRFPE-----RRGKAAALNRALA----LATGEIVVFTDANALL-DPDALRLLVRHFAD----PSVGAVSGELV 147 (251)
T ss_pred C--cEEEEEcCC-----CCChHHHHHHHHH----HcCCCEEEEEccccCc-CHHHHHHHHHHhcC----CCccEEEeEEE
Confidence 0 023333332 2469999999999 6889999999999995 79999999999863 56788886555
Q ss_pred ccCcc--hh----hHhHhhhhhhhhcccCCc-eeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHH
Q 006639 329 FYDRP--EN----LCILNEYIGKGIVGIQGP-FYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAA 401 (637)
Q Consensus 329 f~D~~--~~----~~~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~ 401 (637)
..++- .. ...+...........+.. ...|++..+||+++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~--------------------------------- 194 (251)
T cd06439 148 IVDGGGSGSGEGLYWKYENWLKRAESRLGSTVGANGAIYAIRRELFR--------------------------------- 194 (251)
T ss_pred ecCCcccchhHHHHHHHHHHHHHHHHhcCCeeeecchHHHhHHHHhc---------------------------------
Confidence 44221 11 111111111111111111 112222234444331
Q ss_pred HhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCC
Q 006639 402 QTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPS 481 (637)
Q Consensus 402 ~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~t 481 (637)
||......||+++++++..+||++.|.+ .+.++...|.+
T Consensus 195 ---------------------------------------~~~~~~~~eD~~l~~~~~~~G~~~~~~~--~~~~~~~~~~~ 233 (251)
T cd06439 195 ---------------------------------------PLPADTINDDFVLPLRIARQGYRVVYEP--DAVAYEEVAED 233 (251)
T ss_pred ---------------------------------------CCCcccchhHHHHHHHHHHcCCeEEecc--ccEEEEeCccc
Confidence 3556677899999999999999999985 46889999999
Q ss_pred HHHHHHHHHHHHhhhhHH
Q 006639 482 GPAGMRQQKRWATGLLEI 499 (637)
Q Consensus 482 l~~~~~QR~RWa~G~~qi 499 (637)
..++++|+.||+.|++|.
T Consensus 234 ~~~~~~~~~r~~~g~~~~ 251 (251)
T cd06439 234 GSEEFRRRVRIAAGNLQA 251 (251)
T ss_pred HHHHHHHHHHHHhccccC
Confidence 999999999999999983
No 35
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=99.85 E-value=9.5e-20 Score=183.06 Aligned_cols=222 Identities=15% Similarity=0.106 Sum_probs=152.7
Q ss_pred ceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCcc
Q 006639 94 PVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRY 173 (637)
Q Consensus 94 ~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~y 173 (637)
.|+|+||+|| |+ +.+.+++.++++++||..+++|+|+|||+++.|.+.+.+..
T Consensus 1 ~~sIiip~~n---~~-~~l~~~l~sl~~q~~~~~~~evivvd~~s~d~~~~~~~~~~----------------------- 53 (249)
T cd02525 1 FVSIIIPVRN---EE-KYIEELLESLLNQSYPKDLIEIIVVDGGSTDGTREIVQEYA----------------------- 53 (249)
T ss_pred CEEEEEEcCC---ch-hhHHHHHHHHHhccCCCCccEEEEEeCCCCccHHHHHHHHH-----------------------
Confidence 3899999999 65 47899999999999997789999999999997643332210
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeE
Q 006639 174 FPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHL 253 (637)
Q Consensus 174 f~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l 253 (637)
+ ..|.+
T Consensus 54 -----------------------------~---------------------------------------------~~~~v 59 (249)
T cd02525 54 -----------------------------A---------------------------------------------KDPRI 59 (249)
T ss_pred -----------------------------h---------------------------------------------cCCeE
Confidence 0 01223
Q ss_pred EEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcccc--C
Q 006639 254 VYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--D 331 (637)
Q Consensus 254 ~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~--D 331 (637)
.++..+ .+++++|+|.|++ .+++|+++++|+|.++ +|++|.+++.++.++ +...|+.+.... +
T Consensus 60 ~~i~~~------~~~~~~a~N~g~~----~a~~d~v~~lD~D~~~-~~~~l~~~~~~~~~~----~~~~v~~~~~~~~~~ 124 (249)
T cd02525 60 RLIDNP------KRIQSAGLNIGIR----NSRGDIIIRVDAHAVY-PKDYILELVEALKRT----GADNVGGPMETIGES 124 (249)
T ss_pred EEEeCC------CCCchHHHHHHHH----HhCCCEEEEECCCccC-CHHHHHHHHHHHhcC----CCCEEecceecCCCC
Confidence 444432 1368999999999 6899999999999995 899999999888642 344444332221 2
Q ss_pred cchh-hH----hHhhhhhhhhcccC---CceeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHHh
Q 006639 332 RPEN-LC----ILNEYIGKGIVGIQ---GPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQT 403 (637)
Q Consensus 332 ~~~~-~~----~f~~~~~~g~d~~~---~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~~ 403 (637)
.+.. .. ..+........... .....|.+.++||+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------ 168 (249)
T cd02525 125 KFQKAIAVAQSSPLGSGGSAYRGGAVKIGYVDTVHHGAYRREVF------------------------------------ 168 (249)
T ss_pred hHHHHHHHHhhchhccCCccccccccccccccccccceEEHHHH------------------------------------
Confidence 2211 00 00010000000000 1133455555665554
Q ss_pred hcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCc-ccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCCH
Q 006639 404 LEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYG-ATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSG 482 (637)
Q Consensus 404 ~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~-sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~tl 482 (637)
.++| ||++. ...||.++++++.++|+++.|.+ .+.+....|.++
T Consensus 169 -------------------~~~g--------------~~~~~~~~~eD~~l~~r~~~~G~~~~~~~--~~~~~~~~~~s~ 213 (249)
T cd02525 169 -------------------EKVG--------------GFDESLVRNEDAELNYRLRKAGYKIWLSP--DIRVYYYPRSTL 213 (249)
T ss_pred -------------------HHhC--------------CCCcccCccchhHHHHHHHHcCcEEEEcC--CeEEEEcCCCCH
Confidence 2343 45543 35799999999999999999996 367788899999
Q ss_pred HHHHHHHHHHHhhhhHHHHh
Q 006639 483 PAGMRQQKRWATGLLEILFS 502 (637)
Q Consensus 483 ~~~~~QR~RWa~G~~qil~~ 502 (637)
+.+++|+.||+.|..|++.+
T Consensus 214 ~~~~~~~~r~~~~~~~~~~~ 233 (249)
T cd02525 214 KKLARQYFRYGKWRARTLRK 233 (249)
T ss_pred HHHHHHHHHHhhhhHHHHHh
Confidence 99999999999999999864
No 36
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=99.78 E-value=1.3e-18 Score=170.77 Aligned_cols=160 Identities=19% Similarity=0.127 Sum_probs=115.4
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccCCC
Q 006639 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (637)
Q Consensus 97 V~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 176 (637)
|+||+|| |. +++.+||.|+++++ | +++|+|+|||++|.|.+.+. . .
T Consensus 1 ViIp~~N---e~-~~l~~~l~sl~~~~-~--~~eIivvdd~S~D~t~~~~~-~-~------------------------- 46 (191)
T cd06436 1 VLVPCLN---EE-AVIQRTLASLLRNK-P--NFLVLVIDDASDDDTAGIVR-L-A------------------------- 46 (191)
T ss_pred CEEeccc---cH-HHHHHHHHHHHhCC-C--CeEEEEEECCCCcCHHHHHh-h-e-------------------------
Confidence 6899999 65 59999999999999 6 78999999999998743322 0 0
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeEEEE
Q 006639 177 SEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYI 256 (637)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l~Yv 256 (637)
. ..+++.++
T Consensus 47 ----------------------------~-------------------------------------------~~~~v~~i 55 (191)
T cd06436 47 ----------------------------I-------------------------------------------TDSRVHLL 55 (191)
T ss_pred ----------------------------e-------------------------------------------cCCcEEEE
Confidence 0 00224555
Q ss_pred eccCCCCCCCCCchHHHHHHHHhcC-------CCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccc
Q 006639 257 SREKRPKHPHHYKAGAMNVLTRVSG-------LMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYF 329 (637)
Q Consensus 257 ~Rek~~g~~~~~KAGaLN~~L~~s~-------~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f 329 (637)
.++... .+.+|++|+|.|++... ...++|+|+++|||.++ +|++|++++.+|.+ ++++.||.+..+
T Consensus 56 ~~~~~~--~~~Gk~~aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~-~~~~l~~~~~~~~~----~~v~~v~~~~~~ 128 (191)
T cd06436 56 RRHLPN--ARTGKGDALNAAYDQIRQILIEEGADPERVIIAVIDADGRL-DPNALEAVAPYFSD----PRVAGTQSRVRM 128 (191)
T ss_pred eccCCc--CCCCHHHHHHHHHHHHhhhccccccCCCccEEEEECCCCCc-CHhHHHHHHHhhcC----CceEEEeeeEEE
Confidence 553211 23479999999998421 01135899999999995 89999998888764 679999999877
Q ss_pred cCcchh---------hHhHhhhhhhhhcccCCceeeccCceeechhhh
Q 006639 330 YDRPEN---------LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVY 368 (637)
Q Consensus 330 ~D~~~~---------~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~ 368 (637)
+|+-.+ ...++..++.++...+...+.|+|+++||++|.
T Consensus 129 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~G~~~~~r~~~l~ 176 (191)
T cd06436 129 YNRHKNLLTILQDLEFFIIIAATQSLRALTGTVGLGGNGQFMRLSALD 176 (191)
T ss_pred ecCCCCHHHHHHHHHHHHHHHHHHHHHHhcCcEEECCeeEEEeHHHHH
Confidence 744332 112334567777777766678999999999983
No 37
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2
Probab=99.75 E-value=1.8e-17 Score=162.06 Aligned_cols=133 Identities=22% Similarity=0.283 Sum_probs=105.2
Q ss_pred EEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcccc---Ccchh-hHhHhhh----hhhhhcccCC-ceeecc
Q 006639 288 FMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY---DRPEN-LCILNEY----IGKGIVGIQG-PFYQGT 358 (637)
Q Consensus 288 ~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~---D~~~~-~~~f~~~----~~~g~d~~~~-~~~~Gt 358 (637)
||+++|||+.+ .||+|++++++|.| |++++||+|+.++ +...+ +...+.. .....+..+. ....|+
T Consensus 1 ~v~~~DaDt~~-~~d~l~~~~~~~~~----~~~~~vq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 75 (193)
T PF13632_consen 1 YVLFLDADTRL-PPDFLERLVAALED----PKVDAVQGPIIFRNRGSLLTRLQDFEYAISHGLSRLSQSSLGRPLFLSGS 75 (193)
T ss_pred CEEEEcCCCCC-ChHHHHHHHHHHhC----CCceEEEccEEecCCCChhheeehhhhhhhhhhhHHHHHhcCCCccccCc
Confidence 68999999995 79999999999874 5799999999986 22233 3333321 1122223333 345799
Q ss_pred CceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccc
Q 006639 359 GTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGD 438 (637)
Q Consensus 359 g~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~ 438 (637)
|.++|++++. ++|
T Consensus 76 ~~~~r~~~l~-------------------------------------------------------~vg------------ 88 (193)
T PF13632_consen 76 GMLFRREALR-------------------------------------------------------EVG------------ 88 (193)
T ss_pred ceeeeHHHHH-------------------------------------------------------HhC------------
Confidence 9999999883 354
Q ss_pred ccccc-CcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCCHHHHHHHHHHHHhhh
Q 006639 439 EVGCL-YGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGL 496 (637)
Q Consensus 439 ~~G~~-~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~QR~RWa~G~ 496 (637)
||+ +.+++||+++++++.++||++.|++ .+.+++++|+|+.++++||+||..|.
T Consensus 89 --~~~~~~~~~ED~~l~~~l~~~G~~~~~~~--~~~~~~~~p~t~~~~~~Qr~RW~~g~ 143 (193)
T PF13632_consen 89 --GFDDPFSIGEDMDLGFRLRRAGYRIVYVP--DAIVYTEAPPTFRAFIRQRRRWARGA 143 (193)
T ss_pred --cccccccccchHHHHHHHHHCCCEEEEec--ccceeeeCCCCHHHHHHHHHHHHhhh
Confidence 798 8899999999999999999999996 35789999999999999999999998
No 38
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=99.74 E-value=6.5e-18 Score=164.08 Aligned_cols=156 Identities=19% Similarity=0.179 Sum_probs=108.1
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccCCC
Q 006639 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (637)
Q Consensus 97 V~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 176 (637)
|+||+|| |+ +.+.+||.++++++||.++++|+|+|||++|.|.+.+.+ +
T Consensus 1 VvIp~~n---e~-~~i~~~l~sl~~~~~p~~~~eiivvdd~s~D~t~~~~~~--------------~------------- 49 (183)
T cd06438 1 ILIPAHN---EE-AVIGNTVRSLKAQDYPRELYRIFVVADNCTDDTAQVARA--------------A------------- 49 (183)
T ss_pred CEEeccc---hH-HHHHHHHHHHHhcCCCCcccEEEEEeCCCCchHHHHHHH--------------c-------------
Confidence 6899999 66 699999999999999988899999999999977433221 0
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeEEEE
Q 006639 177 SEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYI 256 (637)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l~Yv 256 (637)
+ . .++
T Consensus 50 ------------------------------------------~-------------------------------~--~~~ 54 (183)
T cd06438 50 ------------------------------------------G-------------------------------A--TVL 54 (183)
T ss_pred ------------------------------------------C-------------------------------C--eEE
Confidence 0 0 011
Q ss_pred eccCCCCCCCCCchHHHHHHHHhcC-CCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccccCc---
Q 006639 257 SREKRPKHPHHYKAGAMNVLTRVSG-LMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDR--- 332 (637)
Q Consensus 257 ~Rek~~g~~~~~KAGaLN~~L~~s~-~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~D~--- 332 (637)
.+.+ .++.+|++|+|+|++... ..+++|+++++|||+++ .|++|.+++..|.+ ++ ..||+.....++
T Consensus 55 ~~~~---~~~~gk~~aln~g~~~a~~~~~~~d~v~~~DaD~~~-~p~~l~~l~~~~~~---~~--~~v~g~~~~~~~~~~ 125 (183)
T cd06438 55 ERHD---PERRGKGYALDFGFRHLLNLADDPDAVVVFDADNLV-DPNALEELNARFAA---GA--RVVQAYYNSKNPDDS 125 (183)
T ss_pred EeCC---CCCCCHHHHHHHHHHHHHhcCCCCCEEEEEcCCCCC-ChhHHHHHHHHHhh---CC--CeeEEEEeeeCCccC
Confidence 1111 123579999999998421 12469999999999995 79999999999973 22 356655444321
Q ss_pred -chh-----hHhHhhhhhhhhcccCCc-eeeccCceeechhh
Q 006639 333 -PEN-----LCILNEYIGKGIVGIQGP-FYQGTGTFHRRDVV 367 (637)
Q Consensus 333 -~~~-----~~~f~~~~~~g~d~~~~~-~~~Gtg~~~RR~aL 367 (637)
+.. ...++.+...++..+++. .+.|+|.++||+++
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~rr~~l 167 (183)
T cd06438 126 WITRLYAFAFLVFNRLRPLGRSNLGLSCQLGGTGMCFPWAVL 167 (183)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCeeecCchhhhHHHHH
Confidence 111 223334455566666655 45799999999988
No 39
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.74 E-value=5e-17 Score=158.78 Aligned_cols=123 Identities=17% Similarity=0.237 Sum_probs=91.8
Q ss_pred CceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCc
Q 006639 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (637)
Q Consensus 93 P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 172 (637)
|.|+|+||+|| |+.+.+.+|+.|+++++|| .++|+|+|||+++.|...+.+.
T Consensus 1 p~vsiii~~~n---~~~~~l~~~l~sl~~q~~~--~~eiivvd~gs~d~~~~~~~~~----------------------- 52 (202)
T cd04184 1 PLISIVMPVYN---TPEKYLREAIESVRAQTYP--NWELCIADDASTDPEVKRVLKK----------------------- 52 (202)
T ss_pred CeEEEEEeccc---CcHHHHHHHHHHHHhCcCC--CeEEEEEeCCCCChHHHHHHHH-----------------------
Confidence 78999999999 6656899999999999999 6899999999998653333221
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCe
Q 006639 173 YFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPH 252 (637)
Q Consensus 173 yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~ 252 (637)
| .. ..++
T Consensus 53 -------------------------~------~~------------------------------------------~~~~ 59 (202)
T cd04184 53 -------------------------Y------AA------------------------------------------QDPR 59 (202)
T ss_pred -------------------------H------Hh------------------------------------------cCCC
Confidence 0 00 0012
Q ss_pred EEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccc
Q 006639 253 LVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYF 329 (637)
Q Consensus 253 l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f 329 (637)
+.++..+. +.+++.|+|.|++ .+++||++++|+|.++ +|++|.+++..|. .++++++|.+....
T Consensus 60 ~~~~~~~~-----~~g~~~a~n~g~~----~a~~d~i~~ld~D~~~-~~~~l~~~~~~~~---~~~~~~~v~~~~~~ 123 (202)
T cd04184 60 IKVVFREE-----NGGISAATNSALE----LATGEFVALLDHDDEL-APHALYEVVKALN---EHPDADLIYSDEDK 123 (202)
T ss_pred EEEEEccc-----CCCHHHHHHHHHH----hhcCCEEEEECCCCcC-ChHHHHHHHHHHH---hCCCCCEEEccHHh
Confidence 33443332 2479999999999 6899999999999995 8999999999984 23567777655443
No 40
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=99.68 E-value=8.1e-16 Score=150.34 Aligned_cols=119 Identities=14% Similarity=0.172 Sum_probs=88.9
Q ss_pred eEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccCC
Q 006639 96 DMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFP 175 (637)
Q Consensus 96 dV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 175 (637)
+|+|||||. |.++.+.+|+.|+++++|| ..+|+|+|||+++++...+.+
T Consensus 1 sviip~~n~--~~~~~l~~~l~Sl~~q~~~--~~eiiivdd~ss~d~t~~~~~--------------------------- 49 (201)
T cd04195 1 SVLMSVYIK--EKPEFLREALESILKQTLP--PDEVVLVKDGPVTQSLNEVLE--------------------------- 49 (201)
T ss_pred CEEEEcccc--chHHHHHHHHHHHHhcCCC--CcEEEEEECCCCchhHHHHHH---------------------------
Confidence 489999994 4467999999999999999 468999999996643222211
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeEEE
Q 006639 176 DSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVY 255 (637)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l~Y 255 (637)
... . ..| +.+
T Consensus 50 ----------------------------~~~------------~-----------------------------~~~-i~~ 59 (201)
T cd04195 50 ----------------------------EFK------------R-----------------------------KLP-LKV 59 (201)
T ss_pred ----------------------------HHH------------h-----------------------------cCC-eEE
Confidence 000 0 011 345
Q ss_pred EeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcc
Q 006639 256 ISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQY 328 (637)
Q Consensus 256 v~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~ 328 (637)
+..+++ .++++|+|.|++ .++||||+++|+|.++ .|++|.+++.+|. .++++++|.+...
T Consensus 60 i~~~~n-----~G~~~a~N~g~~----~a~gd~i~~lD~Dd~~-~~~~l~~~~~~~~---~~~~~~~~~~~~~ 119 (201)
T cd04195 60 VPLEKN-----RGLGKALNEGLK----HCTYDWVARMDTDDIS-LPDRFEKQLDFIE---KNPEIDIVGGGVL 119 (201)
T ss_pred EEcCcc-----ccHHHHHHHHHH----hcCCCEEEEeCCcccc-CcHHHHHHHHHHH---hCCCeEEEcccEE
Confidence 555432 479999999999 7899999999999995 8999999999996 3467888876543
No 41
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.62 E-value=9.9e-15 Score=141.00 Aligned_cols=114 Identities=15% Similarity=0.152 Sum_probs=84.8
Q ss_pred eEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccCC
Q 006639 96 DMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFP 175 (637)
Q Consensus 96 dV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 175 (637)
+|+||+|| |+ +.+.+++.|+++++|| .++|+|+|||++|.|.+.+.+..
T Consensus 1 sivi~~~n---~~-~~l~~~l~sl~~q~~~--~~evivvDd~s~d~~~~~~~~~~------------------------- 49 (202)
T cd06433 1 SIITPTYN---QA-ETLEETIDSVLSQTYP--NIEYIVIDGGSTDGTVDIIKKYE------------------------- 49 (202)
T ss_pred CEEEeccc---hH-HHHHHHHHHHHhCCCC--CceEEEEeCCCCccHHHHHHHhH-------------------------
Confidence 48999999 65 6899999999999999 48999999999998744333200
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeEEE
Q 006639 176 DSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVY 255 (637)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l~Y 255 (637)
.+ ..+
T Consensus 50 ---------------------------~~------------------------------------------------~~~ 54 (202)
T cd06433 50 ---------------------------DK------------------------------------------------ITY 54 (202)
T ss_pred ---------------------------hh------------------------------------------------cEE
Confidence 00 022
Q ss_pred EeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcc
Q 006639 256 ISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQY 328 (637)
Q Consensus 256 v~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~ 328 (637)
+..++ ..++++|+|.|++ .+++|||+++|+|.++ .++.+.+++..+. ..++..+|.....
T Consensus 55 ~~~~~-----~~g~~~a~n~~~~----~a~~~~v~~ld~D~~~-~~~~~~~~~~~~~---~~~~~~~v~g~~~ 114 (202)
T cd06433 55 WISEP-----DKGIYDAMNKGIA----LATGDIIGFLNSDDTL-LPGALLAVVAAFA---EHPEVDVVYGDVL 114 (202)
T ss_pred EEecC-----CcCHHHHHHHHHH----HcCCCEEEEeCCCccc-CchHHHHHHHHHH---hCCCccEEEeeeE
Confidence 22222 2379999999999 7899999999999995 7999999985554 2345666665443
No 42
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=99.61 E-value=4e-14 Score=148.54 Aligned_cols=110 Identities=14% Similarity=0.071 Sum_probs=86.0
Q ss_pred eEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccCC
Q 006639 96 DMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFP 175 (637)
Q Consensus 96 dV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 175 (637)
+|+||+|| |+++.+.+||.|+++..||....+|+|+||||+|.|.+.+.+.
T Consensus 1 SIIIp~~N---~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~S~d~t~~~~~~~-------------------------- 51 (299)
T cd02510 1 SVIIIFHN---EALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEE-------------------------- 51 (299)
T ss_pred CEEEEEec---CcHHHHHHHHHHHHhcCchhcCCEEEEEECCCCchHHHHHHHH--------------------------
Confidence 58999999 7767999999999999998656799999999999875544320
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeEEE
Q 006639 176 DSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVY 255 (637)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l~Y 255 (637)
... ...|++.+
T Consensus 52 -----------------------------~~~----------------------------------------~~~~~v~v 62 (299)
T cd02510 52 -----------------------------YYK----------------------------------------KYLPKVKV 62 (299)
T ss_pred -----------------------------HHh----------------------------------------hcCCcEEE
Confidence 000 01123455
Q ss_pred EeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006639 256 ISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLG 313 (637)
Q Consensus 256 v~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d 313 (637)
+..++ +.+++.|.|.|++ .++||||+.+|+|.++ .|++|.+++..+..
T Consensus 63 i~~~~-----n~G~~~a~N~g~~----~A~gd~i~fLD~D~~~-~~~wL~~ll~~l~~ 110 (299)
T cd02510 63 LRLKK-----REGLIRARIAGAR----AATGDVLVFLDSHCEV-NVGWLEPLLARIAE 110 (299)
T ss_pred EEcCC-----CCCHHHHHHHHHH----HccCCEEEEEeCCccc-CccHHHHHHHHHHh
Confidence 54443 2479999999999 7999999999999995 89999999999874
No 43
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.60 E-value=1.8e-14 Score=141.41 Aligned_cols=120 Identities=16% Similarity=0.141 Sum_probs=90.9
Q ss_pred eEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccCC
Q 006639 96 DMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFP 175 (637)
Q Consensus 96 dV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 175 (637)
+|+||||| |+ ..+.++|.|++.++|| +++|+|+|||++|.|.+.+.+..
T Consensus 1 sIvIp~yn---~~-~~l~~~l~sl~~q~~~--~~eiiVvddgS~d~t~~~~~~~~------------------------- 49 (214)
T cd04196 1 AVLMATYN---GE-KYLREQLDSILAQTYK--NDELIISDDGSTDGTVEIIKEYI------------------------- 49 (214)
T ss_pred CEEEEecC---cH-HHHHHHHHHHHhCcCC--CeEEEEEeCCCCCCcHHHHHHHH-------------------------
Confidence 58999999 65 5899999999999999 79999999999998865544310
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeEEE
Q 006639 176 DSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVY 255 (637)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l~Y 255 (637)
..|| +.+.+
T Consensus 50 ------------------------------------------------------~~~~-----------------~~~~~ 58 (214)
T cd04196 50 ------------------------------------------------------DKDP-----------------FIIIL 58 (214)
T ss_pred ------------------------------------------------------hcCC-----------------ceEEE
Confidence 0011 01233
Q ss_pred EeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcccc
Q 006639 256 ISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY 330 (637)
Q Consensus 256 v~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~ 330 (637)
+..++ .+++++|+|.|+. .+++|||+++|+|.+. .|+.|.+++..+. .++..+++.+.....
T Consensus 59 ~~~~~-----~~G~~~~~n~g~~----~~~g~~v~~ld~Dd~~-~~~~l~~~~~~~~---~~~~~~~~~~~~~~~ 120 (214)
T cd04196 59 IRNGK-----NLGVARNFESLLQ----AADGDYVFFCDQDDIW-LPDKLERLLKAFL---KDDKPLLVYSDLELV 120 (214)
T ss_pred EeCCC-----CccHHHHHHHHHH----hCCCCEEEEECCCccc-ChhHHHHHHHHHh---cCCCceEEecCcEEE
Confidence 33332 3579999999999 7899999999999995 8999999999865 245677777665443
No 44
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.58 E-value=8.3e-14 Score=137.96 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=38.1
Q ss_pred eeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchH
Q 006639 95 VDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNF 143 (637)
Q Consensus 95 VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~ 143 (637)
|+|+||+|| |+. .+.+||.|++++.|+ .++|+|+|||++|.|.
T Consensus 1 vsvii~~~n---~~~-~l~~~l~sl~~q~~~--~~evivvdd~s~d~~~ 43 (221)
T cd02522 1 LSIIIPTLN---EAE-NLPRLLASLRRLNPL--PLEIIVVDGGSTDGTV 43 (221)
T ss_pred CEEEEEccC---cHH-HHHHHHHHHHhccCC--CcEEEEEeCCCCccHH
Confidence 689999999 764 789999999999996 7899999999999763
No 45
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=99.58 E-value=8.2e-14 Score=141.76 Aligned_cols=42 Identities=12% Similarity=0.062 Sum_probs=38.2
Q ss_pred CCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006639 267 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLG 313 (637)
Q Consensus 267 ~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d 313 (637)
.+|++|+|.|++ .+++|||+++|+|... +|++|.+++..+.+
T Consensus 79 ~G~~~a~n~g~~----~a~g~~i~~lD~D~~~-~~~~l~~l~~~~~~ 120 (243)
T PLN02726 79 LGLGTAYIHGLK----HASGDFVVIMDADLSH-HPKYLPSFIKKQRE 120 (243)
T ss_pred CCHHHHHHHHHH----HcCCCEEEEEcCCCCC-CHHHHHHHHHHHHh
Confidence 469999999999 6899999999999995 89999999998864
No 46
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2.4.1.16 from EC), also known as chitin-UDP acetyl-glucosaminyl transferase, is a plasma membrane-bound protein which catalyses the conversion of UDP-N-acettyl-D-glucosamine and {(1,4)-(N-acetyl- beta-D-glucosaminyl)}(N) to UDP and {(1,4)-(N-acetyl-beta-D- glucosaminyl)}(N+1). It plays a major role in cell wall biogenesis. ; GO: 0016758 transferase activity, transferring hexosyl groups
Probab=99.55 E-value=4.3e-12 Score=141.76 Aligned_cols=168 Identities=14% Similarity=0.159 Sum_probs=101.3
Q ss_pred CCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccccCc-------chhhHhHh-hhhhhhhcccCCcee
Q 006639 284 TNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDR-------PENLCILN-EYIGKGIVGIQGPFY 355 (637)
Q Consensus 284 s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~D~-------~~~~~~f~-~~~~~g~d~~~~~~~ 355 (637)
...|||+.+|||+.+ +|+.+.+++--+. .+++++-|..--+-.+. +++.+.+. ..++++....-|.+.
T Consensus 200 ~~~~~il~~DaDt~~-~p~~~~~lv~~m~---~d~~i~gvCG~t~i~n~~~s~~t~~Q~fEY~ish~l~Ka~Es~fG~Vt 275 (527)
T PF03142_consen 200 DFYEYILMVDADTKF-DPDSVNRLVDAME---RDPKIGGVCGETRIDNKGQSWWTMYQVFEYAISHHLQKAFESVFGSVT 275 (527)
T ss_pred cceEEEEEecCCceE-cHHHHHHHHHHHc---CCCCeEEEeceeEEcCCCCCHhhheeccchhHHHHHHHHHHHHhCcee
Confidence 356999999999996 9999999999886 45677777652111111 11111111 223444444444444
Q ss_pred e--ccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccccc
Q 006639 356 Q--GTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYEYG 433 (637)
Q Consensus 356 ~--Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~ 433 (637)
| |.-+++|-+|+.+..-.. . ......+...+|.. + ..+.+.+-
T Consensus 276 CLPGcfsmyR~~a~~~~~~~~--~-p~l~~~~i~~~Y~~--------------~----------~~dtlh~~-------- 320 (527)
T PF03142_consen 276 CLPGCFSMYRISALMDGDGYW--V-PLLISPDIIEKYSE--------------N----------PVDTLHQK-------- 320 (527)
T ss_pred ecCCcceeeeeehhccccccc--c-ccccchHHHHHHhh--------------c----------cchHHHHH--------
Confidence 4 666689998885411000 0 00000011111100 0 00111111
Q ss_pred ccccccccccCcccchhHHHHHHHHhC--CCeEEEeCCCCceeeeccCCCHHHHHHHHHHHHhhhhHHHH
Q 006639 434 SSWGDEVGCLYGATAEDNLTGLVIHSK--GWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATGLLEILF 501 (637)
Q Consensus 434 t~wg~~~G~~~~sltED~~ts~rl~~~--Gwr~~y~~~~~~~~~g~aP~tl~~~~~QR~RWa~G~~qil~ 501 (637)
+-..+.||=.++-.|.++ |||..|++ .+.+...+|+|++.+++||+||..|.+--++
T Consensus 321 ---------nl~~lGEDR~LttLlLk~~~~~k~~y~~--~A~a~T~aP~t~~vflsQRRRWinSTi~Nl~ 379 (527)
T PF03142_consen 321 ---------NLLDLGEDRWLTTLLLKQFPGYKTEYVP--SAVAYTDAPETFSVFLSQRRRWINSTIHNLF 379 (527)
T ss_pred ---------hhhhcchhHHHHHHHHhhCCCceEEEcc--cccccccCCccHHHHHHHhhhccchhHhhHh
Confidence 113578999999777776 89999996 5789999999999999999999999986543
No 47
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.55 E-value=1.1e-13 Score=129.63 Aligned_cols=156 Identities=20% Similarity=0.183 Sum_probs=119.0
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccCCC
Q 006639 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (637)
Q Consensus 97 V~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 176 (637)
|+||+|| | ++.+.+|+.|+.+.+|| ..+++|+|||+++.|.+.+.+..
T Consensus 1 vii~~~~---~-~~~l~~~l~sl~~~~~~--~~~iiivdd~s~~~~~~~~~~~~-------------------------- 48 (166)
T cd04186 1 IIIVNYN---S-LEYLKACLDSLLAQTYP--DFEVIVVDNASTDGSVELLRELF-------------------------- 48 (166)
T ss_pred CEEEecC---C-HHHHHHHHHHHHhccCC--CeEEEEEECCCCchHHHHHHHhC--------------------------
Confidence 6899999 7 46899999999999996 67899999999997644433210
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeEEEE
Q 006639 177 SEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYI 256 (637)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l~Yv 256 (637)
+++.++
T Consensus 49 --------------------------------------------------------------------------~~~~~~ 54 (166)
T cd04186 49 --------------------------------------------------------------------------PEVRLI 54 (166)
T ss_pred --------------------------------------------------------------------------CCeEEE
Confidence 012333
Q ss_pred eccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccccCcchhh
Q 006639 257 SREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPENL 336 (637)
Q Consensus 257 ~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~D~~~~~ 336 (637)
..++ +.++++|+|.+++ .+++++++++|+|.++ .|+++.+++..+.+ .++++++...
T Consensus 55 ~~~~-----~~g~~~a~n~~~~----~~~~~~i~~~D~D~~~-~~~~l~~~~~~~~~---~~~~~~~~~~---------- 111 (166)
T cd04186 55 RNGE-----NLGFGAGNNQGIR----EAKGDYVLLLNPDTVV-EPGALLELLDAAEQ---DPDVGIVGPK---------- 111 (166)
T ss_pred ecCC-----CcChHHHhhHHHh----hCCCCEEEEECCCcEE-CccHHHHHHHHHHh---CCCceEEEcc----------
Confidence 3322 2479999999999 6799999999999995 89999999987763 4677777521
Q ss_pred HhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchh
Q 006639 337 CILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNIS 416 (637)
Q Consensus 337 ~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~~~~g~~~~~~~~~~ 416 (637)
.+|++.++||+++.
T Consensus 112 ------------------~~~~~~~~~~~~~~------------------------------------------------ 125 (166)
T cd04186 112 ------------------VSGAFLLVRREVFE------------------------------------------------ 125 (166)
T ss_pred ------------------CceeeEeeeHHHHH------------------------------------------------
Confidence 56788888888773
Q ss_pred hhHHHHhHhhcccccccccccccccccCcc--cchhHHHHHHHHhCCCeEEEeC
Q 006639 417 RSLDEAHRVADCGYEYGSSWGDEVGCLYGA--TAEDNLTGLVIHSKGWRSGYCL 468 (637)
Q Consensus 417 ~~~~~~~~vg~c~ye~~t~wg~~~G~~~~s--ltED~~ts~rl~~~Gwr~~y~~ 468 (637)
++| ||+... ..||.++++++..+||++.+.+
T Consensus 126 -------~~~--------------~~~~~~~~~~eD~~~~~~~~~~g~~i~~~~ 158 (166)
T cd04186 126 -------EVG--------------GFDEDFFLYYEDVDLCLRARLAGYRVLYVP 158 (166)
T ss_pred -------HcC--------------CCChhhhccccHHHHHHHHHHcCCeEEEcc
Confidence 232 455442 5699999999999999999985
No 48
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=99.54 E-value=2.3e-13 Score=130.68 Aligned_cols=104 Identities=16% Similarity=0.198 Sum_probs=78.4
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccCCC
Q 006639 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (637)
Q Consensus 97 V~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 176 (637)
|+||+|| |+ +.+.+||.|+++++|+ .++|+|+|||+++.|.+.+.+..+
T Consensus 1 ivip~~n---~~-~~l~~~l~sl~~q~~~--~~eiivvdd~s~d~t~~~~~~~~~------------------------- 49 (182)
T cd06420 1 LIITTYN---RP-EALELVLKSVLNQSIL--PFEVIIADDGSTEETKELIEEFKS------------------------- 49 (182)
T ss_pred CEEeecC---Ch-HHHHHHHHHHHhccCC--CCEEEEEeCCCchhHHHHHHHHHh-------------------------
Confidence 6899999 76 5789999999999998 679999999999977444332100
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeEEEE
Q 006639 177 SEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYI 256 (637)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l~Yv 256 (637)
.. . . ++.++
T Consensus 50 ---------------------------~~-------------~------------------------------~-~~~~~ 58 (182)
T cd06420 50 ---------------------------QF-------------P------------------------------I-PIKHV 58 (182)
T ss_pred ---------------------------hc-------------C------------------------------C-ceEEE
Confidence 00 0 0 02333
Q ss_pred eccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHh
Q 006639 257 SREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLH 311 (637)
Q Consensus 257 ~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f 311 (637)
.+++ +..+|++|+|.|++ .+++|||+++|+|.++ .|++|.+++..+
T Consensus 59 ~~~~----~~~~~~~~~n~g~~----~a~g~~i~~lD~D~~~-~~~~l~~~~~~~ 104 (182)
T cd06420 59 WQED----EGFRKAKIRNKAIA----AAKGDYLIFIDGDCIP-HPDFIADHIELA 104 (182)
T ss_pred EcCC----cchhHHHHHHHHHH----HhcCCEEEEEcCCccc-CHHHHHHHHHHh
Confidence 3332 12369999999999 7999999999999985 899999999887
No 49
>PF13506 Glyco_transf_21: Glycosyl transferase family 21
Probab=99.53 E-value=7.3e-14 Score=136.30 Aligned_cols=149 Identities=14% Similarity=0.124 Sum_probs=113.2
Q ss_pred CCCchHHHHHHHHhcCCC-CCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcccc--Ccchh--hHhHh
Q 006639 266 HHYKAGAMNVLTRVSGLM-TNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--DRPEN--LCILN 340 (637)
Q Consensus 266 ~~~KAGaLN~~L~~s~~~-s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~--D~~~~--~~~f~ 340 (637)
.+.|.+||..+++ . +++|++++.|+|..+ +||+|++++..+.| +++|+|.++..+. +.+.. ...++
T Consensus 15 ~N~Kv~nL~~~~~----~~a~~d~~~~~DsDi~v-~p~~L~~lv~~l~~----p~vglVt~~~~~~~~~~~~~~l~~~~~ 85 (175)
T PF13506_consen 15 CNPKVNNLAQGLE----AGAKYDYLVISDSDIRV-PPDYLRELVAPLAD----PGVGLVTGLPRGVPARGFWSRLEAAFF 85 (175)
T ss_pred CChHHHHHHHHHH----hhCCCCEEEEECCCeeE-CHHHHHHHHHHHhC----CCCcEEEecccccCCcCHHHHHHHHHH
Confidence 3589999999999 5 999999999999996 89999999999985 5799998766655 33333 22222
Q ss_pred hhhhhhhc-ccCCceeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhH
Q 006639 341 EYIGKGIV-GIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSL 419 (637)
Q Consensus 341 ~~~~~g~d-~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~~~~g~~~~~~~~~~~~~ 419 (637)
.....-.. ..+..++.|..+.+||++|.
T Consensus 86 ~~~~~~~~a~~~~~~~~G~~m~~rr~~L~--------------------------------------------------- 114 (175)
T PF13506_consen 86 NFLPGVLQALGGAPFAWGGSMAFRREALE--------------------------------------------------- 114 (175)
T ss_pred hHHHHHHHHhcCCCceecceeeeEHHHHH---------------------------------------------------
Confidence 21111111 22456788999999999884
Q ss_pred HHHhHhhcccccccccccccccccC--cccchhHHHHHHHHhCCCeEEEeCCCCceeeeccC----CCHHHHHHHHHHHH
Q 006639 420 DEAHRVADCGYEYGSSWGDEVGCLY--GATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCAS----PSGPAGMRQQKRWA 493 (637)
Q Consensus 420 ~~~~~vg~c~ye~~t~wg~~~G~~~--~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP----~tl~~~~~QR~RWa 493 (637)
++| |+.. +.++||+.++-+++++|||++..+ .++.....| .+++++++++.||+
T Consensus 115 ----~~G--------------G~~~l~~~ladD~~l~~~~~~~G~~v~~~~--~~v~~~~~~~~~~~s~~~~~~r~~RW~ 174 (175)
T PF13506_consen 115 ----EIG--------------GFEALADYLADDYALGRRLRARGYRVVLSP--YPVVQTSVPRTLEDSFRDFFRRQLRWA 174 (175)
T ss_pred ----Hcc--------------cHHHHhhhhhHHHHHHHHHHHCCCeEEEcc--hheeecccCccccccHHHHHHHHHhhc
Confidence 232 4443 589999999999999999999985 345666777 48999999999998
Q ss_pred h
Q 006639 494 T 494 (637)
Q Consensus 494 ~ 494 (637)
+
T Consensus 175 r 175 (175)
T PF13506_consen 175 R 175 (175)
T ss_pred C
Confidence 5
No 50
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=99.53 E-value=3.8e-13 Score=133.50 Aligned_cols=105 Identities=16% Similarity=0.106 Sum_probs=80.2
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccCCC
Q 006639 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (637)
Q Consensus 97 V~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 176 (637)
|+||+|| |+ ..+.+++.|+..+.|+ ..++|+|+|||++|.|.+.+.+-.
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~~-~~~eiiiVDd~S~d~t~~~~~~~~-------------------------- 49 (224)
T cd06442 1 IIIPTYN---ER-ENIPELIERLDAALKG-IDYEIIVVDDNSPDGTAEIVRELA-------------------------- 49 (224)
T ss_pred CeEeccc---hh-hhHHHHHHHHHHhhcC-CCeEEEEEeCCCCCChHHHHHHHH--------------------------
Confidence 6899999 65 4789999999999982 378999999999998754332200
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeEEEE
Q 006639 177 SEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYI 256 (637)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l~Yv 256 (637)
+ .+ +++.++
T Consensus 50 --------------------------~---------------------------~~------------------~~i~~~ 58 (224)
T cd06442 50 --------------------------K---------------------------EY------------------PRVRLI 58 (224)
T ss_pred --------------------------H---------------------------hC------------------CceEEE
Confidence 0 01 112334
Q ss_pred eccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006639 257 SREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLG 313 (637)
Q Consensus 257 ~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d 313 (637)
..+++ .+|++|+|.|++ .+.+|+|+++|+|..+ +|++|.+++..+.+
T Consensus 59 ~~~~n-----~G~~~a~n~g~~----~a~gd~i~~lD~D~~~-~~~~l~~l~~~~~~ 105 (224)
T cd06442 59 VRPGK-----RGLGSAYIEGFK----AARGDVIVVMDADLSH-PPEYIPELLEAQLE 105 (224)
T ss_pred ecCCC-----CChHHHHHHHHH----HcCCCEEEEEECCCCC-CHHHHHHHHHHHhc
Confidence 44332 479999999999 7899999999999995 89999999999764
No 51
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=99.53 E-value=5.9e-13 Score=132.65 Aligned_cols=111 Identities=13% Similarity=0.080 Sum_probs=81.7
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccCCC
Q 006639 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (637)
Q Consensus 97 V~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 176 (637)
|+||+|| |+ ..+.+|+.|+++++|| +.++|+|+|||++|.|.+.+.+-
T Consensus 1 ViIp~yn---~~-~~l~~~l~sl~~q~~~-~~~eiiVvDd~S~d~t~~i~~~~--------------------------- 48 (219)
T cd06913 1 IILPVHN---GE-QWLDECLESVLQQDFE-GTLELSVFNDASTDKSAEIIEKW--------------------------- 48 (219)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCCC-CCEEEEEEeCCCCccHHHHHHHH---------------------------
Confidence 6899999 54 5999999999999999 46999999999999885544330
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeEEEE
Q 006639 177 SEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYI 256 (637)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l~Yv 256 (637)
+.+.+ .+++.++
T Consensus 49 -------------------------~~~~~-------------------------------------------~~~~~~~ 60 (219)
T cd06913 49 -------------------------RKKLE-------------------------------------------DSGVIVL 60 (219)
T ss_pred -------------------------HHhCc-------------------------------------------ccCeEEE
Confidence 00100 0112333
Q ss_pred eccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006639 257 SREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLG 313 (637)
Q Consensus 257 ~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d 313 (637)
..++.. ..+.+.+.|+|.|++ .++|||++.+|+|.++ +|+.|.+.+..+.+
T Consensus 61 ~~~~~~-~~~~G~~~a~N~g~~----~a~gd~i~~lD~D~~~-~~~~l~~~~~~~~~ 111 (219)
T cd06913 61 VGSHNS-PSPKGVGYAKNQAIA----QSSGRYLCFLDSDDVM-MPQRIRLQYEAALQ 111 (219)
T ss_pred EecccC-CCCccHHHHHHHHHH----hcCCCEEEEECCCccC-ChhHHHHHHHHHHh
Confidence 332211 123578999999999 7999999999999985 89999988877764
No 52
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=99.50 E-value=1.9e-13 Score=137.00 Aligned_cols=147 Identities=16% Similarity=0.072 Sum_probs=86.8
Q ss_pred EEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHH--HHhhccCCCCcEEEEeCCcccc
Q 006639 253 LVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAM--CLHLGSKNENEFAFIQSPQYFY 330 (637)
Q Consensus 253 l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v--~~f~d~~~~~~va~VQtPq~f~ 330 (637)
+.++..+++ .++++|+|.|++... ..++|||+.+|+|.++ +|++|.+++ .-+.. .+++++.++ |+...
T Consensus 49 i~~i~~~~n-----~G~~~a~N~g~~~a~-~~~~d~v~~lD~D~~~-~~~~l~~l~~~~~~~~--~~~~~~~~~-~~~~~ 118 (237)
T cd02526 49 IELIHLGEN-----LGIAKALNIGIKAAL-ENGADYVLLFDQDSVP-PPDMVEKLLAYKILSD--KNSNIGAVG-PRIID 118 (237)
T ss_pred EEEEECCCc-----eehHHhhhHHHHHHH-hCCCCEEEEECCCCCc-CHhHHHHHHHHHHhhc--cCCCeEEEe-eeEEc
Confidence 355555433 369999999999311 0145999999999995 899999985 22221 345676554 44333
Q ss_pred -Ccchh--hH-----hHhhhhhhhhcccCCceeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHH
Q 006639 331 -DRPEN--LC-----ILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQ 402 (637)
Q Consensus 331 -D~~~~--~~-----~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~ 402 (637)
+.-.. .. .+......+..........|+|+++||+++.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~---------------------------------- 164 (237)
T cd02526 119 RRTGENSPGVRKSGYKLRIQKEGEEGLKEVDFLITSGSLISLEALE---------------------------------- 164 (237)
T ss_pred CCCCeeccceeccCccceecccccCCceEeeeeeccceEEcHHHHH----------------------------------
Confidence 11000 00 0000011111111223445777788888773
Q ss_pred hhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCccc--chhHHHHHHHHhCCCeEEEeCCCCceeeeccCC
Q 006639 403 TLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGAT--AEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASP 480 (637)
Q Consensus 403 ~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sl--tED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~ 480 (637)
++| ||+.... .||+++++|+..+||++.|++. +...-..+.
T Consensus 165 ---------------------~~g--------------gfd~~~~~~~eD~d~~~r~~~~G~~~~~~~~--~~v~h~~~~ 207 (237)
T cd02526 165 ---------------------KVG--------------GFDEDLFIDYVDTEWCLRARSKGYKIYVVPD--AVLKHELGD 207 (237)
T ss_pred ---------------------HhC--------------CCCHHHcCccchHHHHHHHHHcCCcEEEEcC--eEEEecccC
Confidence 343 5765543 5899999999999999999963 444444433
No 53
>PRK10073 putative glycosyl transferase; Provisional
Probab=99.48 E-value=1.3e-12 Score=139.73 Aligned_cols=116 Identities=14% Similarity=0.147 Sum_probs=90.0
Q ss_pred CCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCC
Q 006639 91 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAP 170 (637)
Q Consensus 91 ~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p 170 (637)
..|.|+|+||+|| ++ ..+.+|+.|++++.|+ .++|+|+|||++|.|.+.+.+-.
T Consensus 4 ~~p~vSVIIP~yN---~~-~~L~~~l~Sl~~Qt~~--~~EIIiVdDgStD~t~~i~~~~~-------------------- 57 (328)
T PRK10073 4 STPKLSIIIPLYN---AG-KDFRAFMESLIAQTWT--ALEIIIVNDGSTDNSVEIAKHYA-------------------- 57 (328)
T ss_pred CCCeEEEEEeccC---CH-HHHHHHHHHHHhCCCC--CeEEEEEeCCCCccHHHHHHHHH--------------------
Confidence 3588999999999 54 5899999999999998 78999999999998755443210
Q ss_pred CccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCC
Q 006639 171 FRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEI 250 (637)
Q Consensus 171 ~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 250 (637)
. ..
T Consensus 58 --------------------------------~---------------------------------------------~~ 60 (328)
T PRK10073 58 --------------------------------E---------------------------------------------NY 60 (328)
T ss_pred --------------------------------h---------------------------------------------hC
Confidence 0 01
Q ss_pred CeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEE
Q 006639 251 PHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAF 322 (637)
Q Consensus 251 p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~ 322 (637)
|++.+++.+ +.+.++|.|.|++ .++||||+.+|+|..+ .|+.+.+++..+.+ .+.+++.
T Consensus 61 ~~i~vi~~~------n~G~~~arN~gl~----~a~g~yi~flD~DD~~-~p~~l~~l~~~~~~--~~~dvv~ 119 (328)
T PRK10073 61 PHVRLLHQA------NAGVSVARNTGLA----VATGKYVAFPDADDVV-YPTMYETLMTMALE--DDLDVAQ 119 (328)
T ss_pred CCEEEEECC------CCChHHHHHHHHH----hCCCCEEEEECCCCcc-ChhHHHHHHHHHHh--CCCCEEE
Confidence 234555432 2479999999999 7999999999999996 89999999988764 2345543
No 54
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=99.47 E-value=4e-13 Score=125.06 Aligned_cols=116 Identities=24% Similarity=0.332 Sum_probs=86.5
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccCCC
Q 006639 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (637)
Q Consensus 97 V~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 176 (637)
|+||+|| |+ +.+.+|+.|++++.|+ ..+|+|+|||+++.|.+.+.+...
T Consensus 1 Viip~~n---~~-~~l~~~l~sl~~q~~~--~~~iivvdd~s~d~t~~~~~~~~~------------------------- 49 (180)
T cd06423 1 IIVPAYN---EE-AVIERTIESLLALDYP--KLEVIVVDDGSTDDTLEILEELAA------------------------- 49 (180)
T ss_pred CeecccC---hH-HHHHHHHHHHHhCCCC--ceEEEEEeCCCccchHHHHHHHhc-------------------------
Confidence 6899999 76 6999999999999997 789999999999977444332100
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeEEEE
Q 006639 177 SEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYI 256 (637)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l~Yv 256 (637)
. ..+...++
T Consensus 50 ------------------------------------------~-----------------------------~~~~~~~~ 58 (180)
T cd06423 50 ------------------------------------------L-----------------------------YIRRVLVV 58 (180)
T ss_pred ------------------------------------------c-----------------------------ccceEEEE
Confidence 0 00112444
Q ss_pred eccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCc
Q 006639 257 SREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQ 327 (637)
Q Consensus 257 ~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq 327 (637)
..++ ..+|+.|+|.|++ .+++|+|+++|+|..+ .|++|.+++..+. .+++++.|....
T Consensus 59 ~~~~-----~~g~~~~~n~~~~----~~~~~~i~~~D~D~~~-~~~~l~~~~~~~~---~~~~~~~v~~~~ 116 (180)
T cd06423 59 RDKE-----NGGKAGALNAGLR----HAKGDIVVVLDADTIL-EPDALKRLVVPFF---ADPKVGAVQGRV 116 (180)
T ss_pred Eecc-----cCCchHHHHHHHH----hcCCCEEEEECCCCCc-ChHHHHHHHHHhc---cCCCeeeEeeeE
Confidence 4433 2479999999999 6799999999999995 8999999966665 246677776443
No 55
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=99.46 E-value=1.7e-12 Score=127.31 Aligned_cols=113 Identities=18% Similarity=0.125 Sum_probs=83.3
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccCCC
Q 006639 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (637)
Q Consensus 97 V~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 176 (637)
|+||||| |+ ..+.+++.|++++.|| ..+|+|+|||++|.|.+.+.+.
T Consensus 1 viI~~~n---~~-~~l~~~l~sl~~q~~~--~~eiiivD~~s~d~t~~~~~~~--------------------------- 47 (202)
T cd04185 1 AVVVTYN---RL-DLLKECLDALLAQTRP--PDHIIVIDNASTDGTAEWLTSL--------------------------- 47 (202)
T ss_pred CEEEeeC---CH-HHHHHHHHHHHhccCC--CceEEEEECCCCcchHHHHHHh---------------------------
Confidence 6899999 65 5899999999999999 5689999999999874433321
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeEEEE
Q 006639 177 SEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYI 256 (637)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l~Yv 256 (637)
+ ..+ + +.|+
T Consensus 48 ------------------------------------------~----------~~~------------------~-i~~~ 56 (202)
T cd04185 48 ------------------------------------------G----------DLD------------------N-IVYL 56 (202)
T ss_pred ------------------------------------------c----------CCC------------------c-eEEE
Confidence 0 000 1 2344
Q ss_pred eccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEe
Q 006639 257 SREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQ 324 (637)
Q Consensus 257 ~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQ 324 (637)
.-++ +.+++.++|.|++..- .+++|+++++|+|.++ +|++|.+++..+.+ ++++.+.
T Consensus 57 ~~~~-----n~g~~~~~n~~~~~a~-~~~~d~v~~ld~D~~~-~~~~l~~l~~~~~~----~~~~~~~ 113 (202)
T cd04185 57 RLPE-----NLGGAGGFYEGVRRAY-ELGYDWIWLMDDDAIP-DPDALEKLLAYADK----DNPQFLA 113 (202)
T ss_pred ECcc-----ccchhhHHHHHHHHHh-ccCCCEEEEeCCCCCc-ChHHHHHHHHHHhc----CCceEec
Confidence 4332 2468899999988422 4589999999999995 89999999998863 4566553
No 56
>PRK10018 putative glycosyl transferase; Provisional
Probab=99.44 E-value=3.3e-12 Score=133.60 Aligned_cols=109 Identities=15% Similarity=0.277 Sum_probs=83.5
Q ss_pred CCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCC
Q 006639 91 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAP 170 (637)
Q Consensus 91 ~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p 170 (637)
+.|.|+|+||||| |+ +.+.+||.|+++++|| .++|+|+|||+++ .+.+.+.
T Consensus 3 ~~p~VSVIip~yN---~~-~~l~~~l~Svl~Qt~~--~~EiIVVDDgS~~--~~~~~~~--------------------- 53 (279)
T PRK10018 3 DNPLISIYMPTWN---RQ-QLAIRAIKSVLRQDYS--NWEMIIVDDCSTS--WEQLQQY--------------------- 53 (279)
T ss_pred CCCEEEEEEEeCC---CH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCC--HHHHHHH---------------------
Confidence 4689999999999 55 3678999999999999 6899999999984 1122110
Q ss_pred CccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCC
Q 006639 171 FRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEI 250 (637)
Q Consensus 171 ~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 250 (637)
++.. ..
T Consensus 54 ----------------------------------~~~~----------------------------------------~~ 59 (279)
T PRK10018 54 ----------------------------------VTAL----------------------------------------ND 59 (279)
T ss_pred ----------------------------------HHHc----------------------------------------CC
Confidence 0000 01
Q ss_pred CeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006639 251 PHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 312 (637)
Q Consensus 251 p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~ 312 (637)
|++.|+..++ +.+++.|+|.|+. .++||||+.+|+|.+. .|+.|.+.+.++.
T Consensus 60 ~ri~~i~~~~-----n~G~~~a~N~gi~----~a~g~~I~~lDaDD~~-~p~~l~~~~~~~~ 111 (279)
T PRK10018 60 PRITYIHNDI-----NSGACAVRNQAIM----LAQGEYITGIDDDDEW-TPNRLSVFLAHKQ 111 (279)
T ss_pred CCEEEEECCC-----CCCHHHHHHHHHH----HcCCCEEEEECCCCCC-CccHHHHHHHHHH
Confidence 3356665543 2479999999999 7999999999999996 7999999988775
No 57
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=99.41 E-value=5.2e-12 Score=125.15 Aligned_cols=41 Identities=17% Similarity=0.063 Sum_probs=37.5
Q ss_pred CchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006639 268 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLG 313 (637)
Q Consensus 268 ~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d 313 (637)
+|++|+|.|++ .+++|+|+++|+|... +|+.+.+++..+.+
T Consensus 69 G~~~a~~~g~~----~a~gd~i~~ld~D~~~-~~~~l~~l~~~~~~ 109 (211)
T cd04188 69 GKGGAVRAGML----AARGDYILFADADLAT-PFEELEKLEEALKT 109 (211)
T ss_pred CcHHHHHHHHH----HhcCCEEEEEeCCCCC-CHHHHHHHHHHHhc
Confidence 69999999999 7899999999999995 89999999998664
No 58
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=99.40 E-value=9e-13 Score=122.68 Aligned_cols=158 Identities=19% Similarity=0.140 Sum_probs=109.2
Q ss_pred eEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccCC
Q 006639 96 DMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFP 175 (637)
Q Consensus 96 dV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~ 175 (637)
+|+||||| |+ +.+.+|+.|++.+.++ ..+|+|+|||+++.|.+.+.+..+
T Consensus 1 Svvip~~n---~~-~~l~~~l~sl~~q~~~--~~eiivvdd~s~d~~~~~~~~~~~------------------------ 50 (169)
T PF00535_consen 1 SVVIPTYN---EA-EYLERTLESLLKQTDP--DFEIIVVDDGSTDETEEILEEYAE------------------------ 50 (169)
T ss_dssp EEEEEESS----T-TTHHHHHHHHHHHSGC--EEEEEEEECS-SSSHHHHHHHHHC------------------------
T ss_pred CEEEEeeC---CH-HHHHHHHHHHhhccCC--CEEEEEeccccccccccccccccc------------------------
Confidence 68999999 53 5899999999999666 789999999999987544443110
Q ss_pred CCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeEEE
Q 006639 176 DSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVY 255 (637)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l~Y 255 (637)
..+++.|
T Consensus 51 -------------------------------------------------------------------------~~~~i~~ 57 (169)
T PF00535_consen 51 -------------------------------------------------------------------------SDPNIRY 57 (169)
T ss_dssp -------------------------------------------------------------------------CSTTEEE
T ss_pred -------------------------------------------------------------------------ccccccc
Confidence 0123678
Q ss_pred EeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccccCc-ch
Q 006639 256 ISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDR-PE 334 (637)
Q Consensus 256 v~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~D~-~~ 334 (637)
+.++++ .++++|+|.|++ .++++|++++|+|.++ .|++|.+++..+.+. +..+.....+....+. ..
T Consensus 58 i~~~~n-----~g~~~~~n~~~~----~a~~~~i~~ld~D~~~-~~~~l~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~ 125 (169)
T PF00535_consen 58 IRNPEN-----LGFSAARNRGIK----HAKGEYILFLDDDDII-SPDWLEELVEALEKN--PPDVVIGSVIYIDDDNRYP 125 (169)
T ss_dssp EEHCCC-----SHHHHHHHHHHH----H--SSEEEEEETTEEE--TTHHHHHHHHHHHC--TTEEEEEEEEEEECTTETE
T ss_pred cccccc-----cccccccccccc----ccceeEEEEeCCCceE-cHHHHHHHHHHHHhC--CCcEEEEEEEEecCCcccc
Confidence 888643 379999999999 7999999999999995 899999999999852 2334333333222211 11
Q ss_pred h--h-----HhHhhhhhhhhcccCCceeeccCceeechhhh
Q 006639 335 N--L-----CILNEYIGKGIVGIQGPFYQGTGTFHRRDVVY 368 (637)
Q Consensus 335 ~--~-----~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~ 368 (637)
. . ...+.............+++|+++++||+++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~ 166 (169)
T PF00535_consen 126 DRRLRFSFWNRFERKIFNNIRFWKISFFIGSCALFRRSVFE 166 (169)
T ss_dssp ECCCTSEEEECCHCHHHHTTHSTTSSEESSSCEEEEEHHHH
T ss_pred ccccchhhhhhhhhHHHHhhhcCCcccccccEEEEEHHHHH
Confidence 1 1 23333344455566778899999999999984
No 59
>PRK10063 putative glycosyl transferase; Provisional
Probab=99.34 E-value=3.6e-11 Score=123.61 Aligned_cols=51 Identities=16% Similarity=-0.026 Sum_probs=40.1
Q ss_pred CceeEEEecCCCCCCchHHHHHHHHHHHcC-CCCCCCeEEEEecCCCCcchHHHHH
Q 006639 93 PPVDMFVTTADAELEPPIITVNTVLSLLAV-DYPVHKLACYVSDDACSPLNFYSLV 147 (637)
Q Consensus 93 P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~l-dYP~~kl~vyv~DDg~~~~t~~~l~ 147 (637)
|.|+|+||||| |+ +.+.+|+.|+.++ ..+...++|+|+||||+|.|.+.+.
T Consensus 1 ~~vSVIi~~yN---~~-~~l~~~l~sl~~~~~~~~~~~EiIVvDdgStD~t~~i~~ 52 (248)
T PRK10063 1 MLLSVITVAFR---NL-EGIVKTHASLRHLAQDPGISFEWIVVDGGSNDGTREFLE 52 (248)
T ss_pred CeEEEEEEeCC---CH-HHHHHHHHHHHHHHhCCCCCEEEEEEECcCcccHHHHHH
Confidence 67999999999 54 4899999999864 2222379999999999998855443
No 60
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=99.32 E-value=3.1e-10 Score=121.68 Aligned_cols=117 Identities=12% Similarity=0.083 Sum_probs=83.3
Q ss_pred CCCCceeEEEecCCCCCCchHHHHHHHHHHHcC------CCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhc
Q 006639 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAV------DYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKY 163 (637)
Q Consensus 90 ~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~l------dYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~ 163 (637)
+..|.|+|+||+|| |. ..+.+++.++.+. ++|...++|+|+||||+|.|.+.+.+.. + ++
T Consensus 67 ~~~~~isVVIP~yN---e~-~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDgStD~T~~i~~~~~---~-------~~ 132 (333)
T PTZ00260 67 DSDVDLSIVIPAYN---EE-DRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDGSKDKTLKVAKDFW---R-------QN 132 (333)
T ss_pred CCCeEEEEEEeeCC---CH-HHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCCCCCchHHHHHHHH---H-------hc
Confidence 45689999999999 54 3678888877653 3455578999999999999865544311 0 00
Q ss_pred cccccCCCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCC
Q 006639 164 NVQIRAPFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENK 243 (637)
Q Consensus 164 ~v~~r~p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~ 243 (637)
. . .
T Consensus 133 -----------------------------------------~-------------~-----------~------------ 135 (333)
T PTZ00260 133 -----------------------------------------I-------------N-----------P------------ 135 (333)
T ss_pred -----------------------------------------C-------------C-----------C------------
Confidence 0 0 0
Q ss_pred CCCCCCCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006639 244 GGLSDEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLG 313 (637)
Q Consensus 244 ~~~~~~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d 313 (637)
.+.+.++..++ +.+|++|+|.|++ .++||+|+++|||... +|+.+.+++..+.+
T Consensus 136 ------~~~i~vi~~~~-----N~G~~~A~~~Gi~----~a~gd~I~~~DaD~~~-~~~~l~~l~~~l~~ 189 (333)
T PTZ00260 136 ------NIDIRLLSLLR-----NKGKGGAVRIGML----ASRGKYILMVDADGAT-DIDDFDKLEDIMLK 189 (333)
T ss_pred ------CCcEEEEEcCC-----CCChHHHHHHHHH----HccCCEEEEEeCCCCC-CHHHHHHHHHHHHH
Confidence 01123343332 2479999999999 6899999999999985 89999988887763
No 61
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=99.27 E-value=1.4e-10 Score=120.58 Aligned_cols=63 Identities=16% Similarity=0.062 Sum_probs=46.6
Q ss_pred EEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEe
Q 006639 253 LVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQ 324 (637)
Q Consensus 253 l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQ 324 (637)
+.|+.-+++ .+.|+|+|.|++.. ...++|||+.+|.|.++ ++++|.+++..+.. .+.+++.|.
T Consensus 47 i~~i~~~~N-----~G~a~a~N~Gi~~a-~~~~~d~i~~lD~D~~~-~~~~l~~l~~~~~~--~~~~~~~~~ 109 (281)
T TIGR01556 47 IALIHLGDN-----QGIAGAQNQGLDAS-FRRGVQGVLLLDQDSRP-GNAFLAAQWKLLSA--ENGQACALG 109 (281)
T ss_pred eEEEECCCC-----cchHHHHHHHHHHH-HHCCCCEEEEECCCCCC-CHHHHHHHHHHHHh--cCCceEEEC
Confidence 456654432 46999999999831 11378999999999995 89999999988863 123688775
No 62
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=99.24 E-value=8.8e-11 Score=112.86 Aligned_cols=119 Identities=16% Similarity=0.131 Sum_probs=88.3
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccCCC
Q 006639 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (637)
Q Consensus 97 V~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 176 (637)
|+||+|| |+ ..+.+|+.|+..+.|+....+|+|+|||+++.|.+.+.+..
T Consensus 1 iii~~~n---~~-~~l~~~l~sl~~~~~~~~~~eiivvd~~s~d~~~~~~~~~~-------------------------- 50 (185)
T cd04179 1 VVIPAYN---EE-ENIPELVERLLAVLEEGYDYEIIVVDDGSTDGTAEIARELA-------------------------- 50 (185)
T ss_pred CeecccC---hH-hhHHHHHHHHHHHhccCCCEEEEEEcCCCCCChHHHHHHHH--------------------------
Confidence 6899999 65 58999999999999865588999999999997754443210
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeEEEE
Q 006639 177 SEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYI 256 (637)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l~Yv 256 (637)
.+ .+.+.++
T Consensus 51 --------------------------~~---------------------------------------------~~~~~~~ 59 (185)
T cd04179 51 --------------------------AR---------------------------------------------VPRVRVI 59 (185)
T ss_pred --------------------------Hh---------------------------------------------CCCeEEE
Confidence 00 1123444
Q ss_pred eccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcccc
Q 006639 257 SREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY 330 (637)
Q Consensus 257 ~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~ 330 (637)
..+++ .+|++|+|.|++ .+.+|+++++|+|..+ .|++|.+++..+.. +..++|+.+....
T Consensus 60 ~~~~n-----~G~~~a~n~g~~----~a~gd~i~~lD~D~~~-~~~~l~~l~~~~~~----~~~~~v~g~~~~~ 119 (185)
T cd04179 60 RLSRN-----FGKGAAVRAGFK----AARGDIVVTMDADLQH-PPEDIPKLLEKLLE----GGADVVIGSRFVR 119 (185)
T ss_pred EccCC-----CCccHHHHHHHH----HhcCCEEEEEeCCCCC-CHHHHHHHHHHHhc----cCCcEEEEEeecC
Confidence 44433 369999999999 7899999999999985 89999999998663 2345556554443
No 63
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=99.20 E-value=3.7e-10 Score=108.91 Aligned_cols=92 Identities=12% Similarity=0.104 Sum_probs=57.5
Q ss_pred CCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccccCcc-hh--hHhHhhhh
Q 006639 267 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRP-EN--LCILNEYI 343 (637)
Q Consensus 267 ~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~D~~-~~--~~~f~~~~ 343 (637)
.+|++|+|.|++ .+.+|+|+.+|+|..+ +|++|.+++..+. + +.++.+....... ++. .. ...++..
T Consensus 66 ~G~~~a~n~g~~----~a~~d~i~~~D~D~~~-~~~~l~~l~~~~~-~--~~~~v~g~~~~~~-~~~~~~~~~~~~~~~- 135 (181)
T cd04187 66 FGQQAALLAGLD----HARGDAVITMDADLQD-PPELIPEMLAKWE-E--GYDVVYGVRKNRK-ESWLKRLTSKLFYRL- 135 (181)
T ss_pred CCcHHHHHHHHH----hcCCCEEEEEeCCCCC-CHHHHHHHHHHHh-C--CCcEEEEEecCCc-chHHHHHHHHHHHHH-
Confidence 479999999999 7899999999999995 8999999998843 2 2344433322111 221 11 1222221
Q ss_pred hhhhcccCCceeeccCceeechhhh
Q 006639 344 GKGIVGIQGPFYQGTGTFHRRDVVY 368 (637)
Q Consensus 344 ~~g~d~~~~~~~~Gtg~~~RR~aL~ 368 (637)
.....+..-+...|+..++||+++.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~r~~~~ 160 (181)
T cd04187 136 INKLSGVDIPDNGGDFRLMDRKVVD 160 (181)
T ss_pred HHHHcCCCCCCCCCCEEEEcHHHHH
Confidence 1112222333445666789999885
No 64
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=99.16 E-value=2.1e-08 Score=107.27 Aligned_cols=41 Identities=12% Similarity=0.117 Sum_probs=37.5
Q ss_pred CCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006639 267 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 312 (637)
Q Consensus 267 ~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~ 312 (637)
.+|++|+|+|++ .++||+++++|||... +|+.+.+++..+.
T Consensus 76 ~G~~~A~~~G~~----~A~gd~vv~~DaD~q~-~p~~i~~l~~~~~ 116 (325)
T PRK10714 76 YGQHSAIMAGFS----HVTGDLIITLDADLQN-PPEEIPRLVAKAD 116 (325)
T ss_pred CCHHHHHHHHHH----hCCCCEEEEECCCCCC-CHHHHHHHHHHHH
Confidence 479999999999 7899999999999995 7999999998875
No 65
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=99.14 E-value=2.6e-10 Score=120.96 Aligned_cols=124 Identities=15% Similarity=0.080 Sum_probs=87.4
Q ss_pred CCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCC
Q 006639 91 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAP 170 (637)
Q Consensus 91 ~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p 170 (637)
.-|.|+|+||+|| |+ ..+.++|.++.++.++....+|+|+||||+|.|.+.+.+. +.
T Consensus 29 ~~~~vSVVIPayN---ee-~~I~~~l~sl~~~~~~~~~~EIIVVDDgStD~T~~ia~~~--------------~~----- 85 (306)
T PRK13915 29 AGRTVSVVLPALN---EE-ETVGKVVDSIRPLLMEPLVDELIVIDSGSTDATAERAAAA--------------GA----- 85 (306)
T ss_pred CCCCEEEEEecCC---cH-HHHHHHHHHHHHHhccCCCcEEEEEeCCCccHHHHHHHHh--------------cc-----
Confidence 5689999999999 54 4789999999887652224689999999999886554331 00
Q ss_pred CccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCC
Q 006639 171 FRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEI 250 (637)
Q Consensus 171 ~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 250 (637)
++ +..
T Consensus 86 ---------------------------------~v---------------------------------~~~--------- 90 (306)
T PRK13915 86 ---------------------------------RV---------------------------------VSR--------- 90 (306)
T ss_pred ---------------------------------hh---------------------------------hcc---------
Confidence 00 000
Q ss_pred CeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeC
Q 006639 251 PHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQS 325 (637)
Q Consensus 251 p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQt 325 (637)
...+.+. ..+.+|++|+|.|+. .+++|+|+++|||...++|++|.+++.++.. ++++++|..
T Consensus 91 --~~~~~~~----~~n~Gkg~A~~~g~~----~a~gd~vv~lDaD~~~~~p~~l~~l~~~l~~---~~~~~~V~g 152 (306)
T PRK13915 91 --EEILPEL----PPRPGKGEALWRSLA----ATTGDIVVFVDADLINFDPMFVPGLLGPLLT---DPGVHLVKA 152 (306)
T ss_pred --hhhhhcc----ccCCCHHHHHHHHHH----hcCCCEEEEEeCccccCCHHHHHHHHHHHHh---CCCceEEEE
Confidence 0000000 112479999999999 6899999999999962489999999999862 355777763
No 66
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=99.08 E-value=3.2e-09 Score=96.22 Aligned_cols=112 Identities=21% Similarity=0.268 Sum_probs=81.5
Q ss_pred EEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCccCCC
Q 006639 97 MFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRYFPD 176 (637)
Q Consensus 97 V~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~yf~~ 176 (637)
|+||++| |+ ..+..|+.+++..+|+ ..+++|+||++++.+...+.+..+
T Consensus 1 iii~~~~---~~-~~l~~~l~s~~~~~~~--~~~i~i~~~~~~~~~~~~~~~~~~------------------------- 49 (156)
T cd00761 1 VIIPAYN---EE-PYLERCLESLLAQTYP--NFEVIVVDDGSTDGTLEILEEYAK------------------------- 49 (156)
T ss_pred CEEeecC---cH-HHHHHHHHHHHhCCcc--ceEEEEEeCCCCccHHHHHHHHHh-------------------------
Confidence 5799999 65 5899999999999996 678999999999876444332110
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeEEEE
Q 006639 177 SEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHLVYI 256 (637)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l~Yv 256 (637)
. . +...++
T Consensus 50 ---------------------------~---------------------------~------------------~~~~~~ 57 (156)
T cd00761 50 ---------------------------K---------------------------D------------------PRVIRV 57 (156)
T ss_pred ---------------------------c---------------------------C------------------CCeEEE
Confidence 0 0 001233
Q ss_pred eccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEe
Q 006639 257 SREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQ 324 (637)
Q Consensus 257 ~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQ 324 (637)
.+++ +.+|++++|.++. ..++++++++|+|.+. +|+++...+..+. .+++.++|+
T Consensus 58 ~~~~-----~~g~~~~~~~~~~----~~~~d~v~~~d~D~~~-~~~~~~~~~~~~~---~~~~~~~v~ 112 (156)
T cd00761 58 INEE-----NQGLAAARNAGLK----AARGEYILFLDADDLL-LPDWLERLVAELL---ADPEADAVG 112 (156)
T ss_pred EecC-----CCChHHHHHHHHH----HhcCCEEEEECCCCcc-CccHHHHHHHHHh---cCCCceEEe
Confidence 3322 3479999999999 5789999999999995 8999998755554 235566666
No 67
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=99.04 E-value=3.7e-09 Score=111.76 Aligned_cols=123 Identities=16% Similarity=0.229 Sum_probs=88.6
Q ss_pred CCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCC
Q 006639 92 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPF 171 (637)
Q Consensus 92 ~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~ 171 (637)
-|.|.++|+|||+ .+.+.+++.++.+++||.+ .++++|+|++|.|.+.+.+.+
T Consensus 2 ~~~i~~iiv~yn~----~~~l~~~l~~l~~~~~~~~--~iv~vDn~s~d~~~~~~~~~~--------------------- 54 (305)
T COG1216 2 MPKISIIIVTYNR----GEDLVECLASLAAQTYPDD--VIVVVDNGSTDGSLEALKARF--------------------- 54 (305)
T ss_pred CcceEEEEEecCC----HHHHHHHHHHHhcCCCCCc--EEEEccCCCCCCCHHHHHhhc---------------------
Confidence 4789999999994 2589999999999999964 455899999998754444310
Q ss_pred ccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCC
Q 006639 172 RYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIP 251 (637)
Q Consensus 172 ~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p 251 (637)
.|
T Consensus 55 ------------------------------------------------------------------------------~~ 56 (305)
T COG1216 55 ------------------------------------------------------------------------------FP 56 (305)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 12
Q ss_pred eEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCC-EEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcccc
Q 006639 252 HLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAP-FMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY 330 (637)
Q Consensus 252 ~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e-~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~ 330 (637)
++.++.-.+ +-|=||+.|.|++.. ..+++ |+++++-|.++ +|++|.+++-.+. ..+..+.|+.....+
T Consensus 57 ~v~~i~~~~-----NlG~agg~n~g~~~a--~~~~~~~~l~LN~D~~~-~~~~l~~ll~~~~---~~~~~~~~~~~i~~~ 125 (305)
T COG1216 57 NVRLIENGE-----NLGFAGGFNRGIKYA--LAKGDDYVLLLNPDTVV-EPDLLEELLKAAE---EDPAAGVVGPLIRNY 125 (305)
T ss_pred cEEEEEcCC-----CccchhhhhHHHHHH--hcCCCcEEEEEcCCeee-ChhHHHHHHHHHH---hCCCCeEeeeeEecC
Confidence 234444332 235789999988831 23333 99999999875 9999999999987 356778777554443
No 68
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=99.03 E-value=6.8e-09 Score=108.61 Aligned_cols=58 Identities=17% Similarity=0.301 Sum_probs=42.9
Q ss_pred CCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcccc
Q 006639 267 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY 330 (637)
Q Consensus 267 ~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~ 330 (637)
-.+|.|.|.|+. .+++|+|+++|+|+++ .|+++.+++.+...-.. ..-+++-.|..+.
T Consensus 74 f~~a~arN~g~~----~A~~d~l~flD~D~i~-~~~~i~~~~~~~~~l~~-~~~~~~~~p~~yl 131 (281)
T PF10111_consen 74 FSRAKARNIGAK----YARGDYLIFLDADCIP-SPDFIEKLLNHVKKLDK-NPNAFLVYPCLYL 131 (281)
T ss_pred cCHHHHHHHHHH----HcCCCEEEEEcCCeee-CHHHHHHHHHHHHHHhc-CCCceEEEeeeec
Confidence 379999999999 7999999999999995 89999999994221111 2234444565555
No 69
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]
Probab=98.99 E-value=9.2e-09 Score=119.27 Aligned_cols=150 Identities=19% Similarity=0.238 Sum_probs=101.2
Q ss_pred CCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccccCcch-------hhH-hHhhhhhhhhcccCCc
Q 006639 282 LMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFYDRPE-------NLC-ILNEYIGKGIVGIQGP 353 (637)
Q Consensus 282 ~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~D~~~-------~~~-~f~~~~~~g~d~~~~~ 353 (637)
++..-+||+++|+|+.+ +|+++.+++.-|. .+++||-+.. +-.+..+ +.+ ..-...++.-+..-|-
T Consensus 437 L~~~v~~il~vD~dT~~-~P~ai~~lv~~f~---~dp~VggaCG--~I~~~~~~w~v~~Q~FEY~Ish~l~Ka~ESvFG~ 510 (862)
T KOG2571|consen 437 LMPSVDYILVVDADTRL-DPDALYHLVKVFD---EDPQVGGACG--RILNKGGSWVVAYQNFEYAISHNLQKATESVFGC 510 (862)
T ss_pred hcCcceEEEEecCCCcc-CcHHHHHHHHHhc---cCcccceecc--ccccCCCceEEeHHHHHHHHHHHHHHhhhhhcee
Confidence 35566899999999995 9999999999996 3456665543 1111111 111 1112345555566677
Q ss_pred eeeccCc--eeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhhHHHHhHhhccccc
Q 006639 354 FYQGTGT--FHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRSLDEAHRVADCGYE 431 (637)
Q Consensus 354 ~~~Gtg~--~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye 431 (637)
+.|-.|| ++|-+||.+- ..+..||... -
T Consensus 511 VsclPGcfs~yR~~aL~~~--------------~~~~~y~~~~------------------------------~------ 540 (862)
T KOG2571|consen 511 VSCLPGCFSLYRASALMDQ--------------FVEYFYGEKF------------------------------S------ 540 (862)
T ss_pred EEecCchhHHHHHHHHhcc--------------hHHhhhchhh------------------------------c------
Confidence 7777776 5787787531 1111222110 0
Q ss_pred ccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCCHHHHHHHHHHHHhh
Q 006639 432 YGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWATG 495 (637)
Q Consensus 432 ~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~QR~RWa~G 495 (637)
|..-|..+ +..||=.+..++..+||+..|+. ++.+..++|+++.+++.||+||..|
T Consensus 541 -----~~~~~~~~-~~geDR~L~~~llskgy~l~Y~a--~s~a~t~~Pe~~~efl~QrrRW~~s 596 (862)
T KOG2571|consen 541 -----GPRHGIQY-SLGEDRWLCTLLLSKGYRLKYVA--ASDAETEAPESFLEFLNQRRRWLNS 596 (862)
T ss_pred -----Cccccccc-ccchhHHHHHHHHhccceeeeec--cccccccCcHhHHHHHHHhhhhccc
Confidence 00013334 49999999999999999999997 4688999999999999999999999
No 70
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.75 E-value=7.2e-08 Score=89.79 Aligned_cols=50 Identities=22% Similarity=0.239 Sum_probs=43.6
Q ss_pred CCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHH
Q 006639 92 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLV 147 (637)
Q Consensus 92 ~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ 147 (637)
.|.|+|+||||| |+ ..+.++|.|++.+.|+. .+|+|+|||++|.|.+.+.
T Consensus 2 ~~~~siiip~~n---~~-~~l~~~l~s~~~q~~~~--~eiivvddgs~d~t~~~~~ 51 (291)
T COG0463 2 MPKVSVVIPTYN---EE-EYLPEALESLLNQTYKD--FEIIVVDDGSTDGTTEIAI 51 (291)
T ss_pred CccEEEEEeccc---hh-hhHHHHHHHHHhhhhcc--eEEEEEeCCCCCChHHHHH
Confidence 488999999999 55 69999999999999995 7899999999998855443
No 71
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=98.74 E-value=9.5e-08 Score=96.53 Aligned_cols=42 Identities=17% Similarity=0.226 Sum_probs=37.8
Q ss_pred CCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006639 267 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLG 313 (637)
Q Consensus 267 ~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d 313 (637)
.+++.+.|.|+. .+.+|+|+++|||.++ .|+.+.++...+.+
T Consensus 57 ~g~~~~~n~~~~----~a~~d~vl~lDaD~~~-~~~~~~~l~~~~~~ 98 (229)
T cd02511 57 DGFGAQRNFALE----LATNDWVLSLDADERL-TPELADEILALLAT 98 (229)
T ss_pred CChHHHHHHHHH----hCCCCEEEEEeCCcCc-CHHHHHHHHHHHhC
Confidence 369999999999 7899999999999996 89999999888864
No 72
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=98.18 E-value=1.7e-05 Score=81.55 Aligned_cols=114 Identities=18% Similarity=0.107 Sum_probs=77.3
Q ss_pred ceeEEEecCCCCCCchHHHHHHHHHHHcCCCCC---CCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCC
Q 006639 94 PVDMFVTTADAELEPPIITVNTVLSLLAVDYPV---HKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAP 170 (637)
Q Consensus 94 ~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~---~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p 170 (637)
...|+||+|||++-=+.+...|+.. +.-.|-. =+.+|.|+|||+.|.|.+... -||+|+|.+
T Consensus 68 ~lsVIVpaynE~~ri~~mldeav~~-le~ry~~~~~F~~eiiVvddgs~d~T~~~a~----------k~s~K~~~d---- 132 (323)
T KOG2977|consen 68 YLSVIVPAYNEEGRIGAMLDEAVDY-LEKRYLSDKSFTYEIIVVDDGSTDSTVEVAL----------KFSRKLGDD---- 132 (323)
T ss_pred eeEEEEecCCcccchHHHHHHHHHH-HHHHhccCCCCceeEEEeCCCCchhHHHHHH----------HHHHHcCcc----
Confidence 6899999999654434444555544 4445554 378999999999998865433 377777521
Q ss_pred CccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCC
Q 006639 171 FRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEI 250 (637)
Q Consensus 171 ~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 250 (637)
T Consensus 133 -------------------------------------------------------------------------------- 132 (323)
T KOG2977|consen 133 -------------------------------------------------------------------------------- 132 (323)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCC--CCCchHHHHHHHHHhh
Q 006639 251 PHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDM--YANNPEIVLQAMCLHL 312 (637)
Q Consensus 251 p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~--~~p~pd~L~~~v~~f~ 312 (637)
++..+.-.+ +.+|.||...|+. +++|+++++.|||- ..++-+.|.+.|.--.
T Consensus 133 -~irV~~l~~-----nrgKGgAvR~g~l----~~rG~~ilfadAdGaTkf~d~ekLe~al~~~~ 186 (323)
T KOG2977|consen 133 -NIRVIKLKK-----NRGKGGAVRKGML----SSRGQKILFADADGATKFADLEKLEKALNDKA 186 (323)
T ss_pred -eEEEeehhc-----cCCCCcceehhhH----hccCceEEEEcCCCCccCCCHHHHHHHHHhhc
Confidence 012222221 2369999999988 79999999999995 3356677887766443
No 73
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=98.06 E-value=3.2e-05 Score=75.12 Aligned_cols=52 Identities=15% Similarity=0.230 Sum_probs=39.3
Q ss_pred CeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006639 251 PHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 312 (637)
Q Consensus 251 p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~ 312 (637)
+++.-..|.+.- +=.-|.-+|+. ++.|+|++++|||-- -+|.++-+.+..-.
T Consensus 63 d~i~l~pR~~kl-----GLgtAy~hgl~----~a~g~fiviMDaDls-HhPk~ipe~i~lq~ 114 (238)
T KOG2978|consen 63 DNILLKPRTKKL-----GLGTAYIHGLK----HATGDFIVIMDADLS-HHPKFIPEFIRLQK 114 (238)
T ss_pred CcEEEEeccCcc-----cchHHHHhhhh----hccCCeEEEEeCccC-CCchhHHHHHHHhh
Confidence 345666776544 35568888998 899999999999998 58998877665543
No 74
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.03 E-value=0.00017 Score=76.65 Aligned_cols=149 Identities=17% Similarity=0.196 Sum_probs=96.7
Q ss_pred CCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEe-CCcccc-Ccchh--hHhHhhh
Q 006639 267 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQ-SPQYFY-DRPEN--LCILNEY 342 (637)
Q Consensus 267 ~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQ-tPq~f~-D~~~~--~~~f~~~ 342 (637)
+-|-.|+=-|.+ .+.+|+|++.|.|-.+ .||.+..+.--++.+ .++|+|. +|-.+. +-+.. ..++|..
T Consensus 156 npKInN~mpgy~----~a~ydlvlisDsgI~m-~pdtildm~t~M~sh---ekmalvtq~py~~dr~Gf~atle~~~fgT 227 (431)
T KOG2547|consen 156 NPKINNMMPGYR----AAKYDLVLISDSGIFM-KPDTILDMATTMMSH---EKMALVTQTPYCKDRQGFDATLEQVYFGT 227 (431)
T ss_pred ChhhhccCHHHH----HhcCCEEEEecCCeee-cCchHHHHHHhhhcc---cceeeecCCceeeccccchhhhhheeecc
Confidence 358788877888 6899999999999998 899999998888843 4799885 664433 22222 2233322
Q ss_pred hhhhh----cccCCceeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHHhhcCCcCCCCCchhhh
Q 006639 343 IGKGI----VGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTGGYSSNISRS 418 (637)
Q Consensus 343 ~~~g~----d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~~~~g~~~~~~~~~~~~ 418 (637)
.++-. |-.+-.+..|-.|++ +
T Consensus 228 sh~r~yl~~n~~~~~c~tgms~~m-------------------------------------------------------r 252 (431)
T KOG2547|consen 228 SHPRIYLSGNVLGFNCSTGMSSMM-------------------------------------------------------R 252 (431)
T ss_pred CCceEEEccccccccccccHHHHH-------------------------------------------------------H
Confidence 21110 000001111222233 3
Q ss_pred HHHHhHhhccccccccccccccccc--CcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCCCHHHHHHHHHHHHh
Q 006639 419 LDEAHRVADCGYEYGSSWGDEVGCL--YGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASPSGPAGMRQQKRWAT 494 (637)
Q Consensus 419 ~~~~~~vg~c~ye~~t~wg~~~G~~--~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~tl~~~~~QR~RWa~ 494 (637)
++++++.| |.. .+.+.||+..+=.+..+||++.+.. .++-...+-.++..+.+|-.||..
T Consensus 253 K~~ld~~g--------------gi~~f~~yLaedyFaaksllSRG~ksaist--~palQnSas~~mssf~~Ri~rwvk 314 (431)
T KOG2547|consen 253 KEALDECG--------------GISAFGGYLAEDYFAAKSLLSRGWKSAIST--HPALQNSASVTMSSFLDRIIRWVK 314 (431)
T ss_pred HHHHHHhc--------------cHHHHHHHHHHHHHHHHHHHhhhhhhhhcc--cchhhhhhhhHHHHHHHHHHHhhh
Confidence 34444444 222 3479999999999999999999985 334456677889999999999984
No 75
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=97.79 E-value=0.0003 Score=75.55 Aligned_cols=44 Identities=20% Similarity=0.180 Sum_probs=36.7
Q ss_pred eeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcch
Q 006639 95 VDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLN 142 (637)
Q Consensus 95 VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t 142 (637)
+-|+|.+|| -| +.+.+||.|+++..+-.+...|+|++||+++.+
T Consensus 2 ~PVlv~ayN---Rp-~~l~r~LesLl~~~p~~~~~~liIs~DG~~~~~ 45 (334)
T cd02514 2 IPVLVIACN---RP-DYLRRMLDSLLSYRPSAEKFPIIVSQDGGYEEV 45 (334)
T ss_pred cCEEEEecC---CH-HHHHHHHHHHHhccccCCCceEEEEeCCCchHH
Confidence 458999999 64 799999999999874445788999999998754
No 76
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.18 E-value=0.015 Score=62.44 Aligned_cols=49 Identities=16% Similarity=0.096 Sum_probs=40.8
Q ss_pred cCCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCc
Q 006639 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSP 140 (637)
Q Consensus 89 ~~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~ 140 (637)
+++||+++|+|--+| |.-.++++||.|++.-.=|.=--+|+++||=+..
T Consensus 151 pe~Lpt~SVviVFHN---EGws~LmRTVHSVi~RsP~~~l~eivlvDDfSdK 199 (603)
T KOG3737|consen 151 PENLPTSSVVIVFHN---EGWSTLMRTVHSVIKRSPRKYLAEIVLVDDFSDK 199 (603)
T ss_pred cccCCcceEEEEEec---CccHHHHHHHHHHHhcCcHHhhheEEEeccCCcc
Confidence 678999999999999 9999999999999986655334468888886655
No 77
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=95.29 E-value=0.049 Score=58.88 Aligned_cols=49 Identities=22% Similarity=0.243 Sum_probs=43.6
Q ss_pred CCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcc
Q 006639 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPL 141 (637)
Q Consensus 90 ~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~ 141 (637)
.++|+-+|+|+-+| |--.++.+||.|+++-.=++=-.+|+++||++.|.
T Consensus 121 ~dlp~TsviITfHN---EARS~LLRTv~SvlnrsP~~li~EiILVDD~S~Dp 169 (559)
T KOG3738|consen 121 VDLPPTSVIITFHN---EARSTLLRTVVSVLNRSPEHLIHEIILVDDFSQDP 169 (559)
T ss_pred cCCCCceEEEEecc---HHHHHHHHHHHHHHcCChHHhhheeEEecCCCCCh
Confidence 57899999999999 88899999999999987665567899999999984
No 78
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.72 E-value=0.035 Score=63.50 Aligned_cols=50 Identities=18% Similarity=0.147 Sum_probs=43.7
Q ss_pred cCCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcc
Q 006639 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPL 141 (637)
Q Consensus 89 ~~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~ 141 (637)
.+.+|++.|+|+-+| |...++.+||.|++...=|.---+|+|+||++..+
T Consensus 138 ~~~Lp~~Svii~f~n---E~~s~llRtv~Svi~rtp~~lLkEIiLVdD~S~~~ 187 (578)
T KOG3736|consen 138 SDKLPTTSVIIIFHN---EAWSTLLRTVHSVINRTPPYLLKEIILVDDFSDRD 187 (578)
T ss_pred ccccCCCceEEEEec---CCCcchhheEEeehccCChhHeEEEEEeecCcchh
Confidence 356999999999999 88889999999999988776677999999998763
No 79
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2
Probab=93.74 E-value=0.35 Score=41.89 Aligned_cols=35 Identities=20% Similarity=0.088 Sum_probs=27.5
Q ss_pred CchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHH
Q 006639 107 EPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSL 146 (637)
Q Consensus 107 Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l 146 (637)
|. ..+...|..-+++.+- ++||.|||++|.|.+.|
T Consensus 3 e~-~~L~~wl~~~~~lG~d----~i~i~d~~s~D~t~~~l 37 (97)
T PF13704_consen 3 EA-DYLPEWLAHHLALGVD----HIYIYDDGSTDGTREIL 37 (97)
T ss_pred hH-HHHHHHHHHHHHcCCC----EEEEEECCCCccHHHHH
Confidence 54 4788888888888765 59999999999875444
No 80
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function. These proteins colocalize within the cis Golgi, where they are physically associated in two distinct complexes [].
Probab=91.43 E-value=2.7 Score=44.04 Aligned_cols=57 Identities=16% Similarity=0.110 Sum_probs=42.1
Q ss_pred CCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCC--cchHHHHHHHH
Q 006639 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACS--PLNFYSLVEAS 150 (637)
Q Consensus 90 ~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~--~~t~~~l~ea~ 150 (637)
.+-|+|=|+.|--|. ++ .+..=...+..++||++.+++-++=.-++ +.|...|.++.
T Consensus 22 ~~~e~VLILtplrna--~~--~l~~y~~~L~~L~YP~~lIsLgfLv~d~~e~d~t~~~l~~~~ 80 (269)
T PF03452_consen 22 RNKESVLILTPLRNA--AS--FLPDYFDNLLSLTYPHELISLGFLVSDSSEFDNTLKILEAAL 80 (269)
T ss_pred ccCCeEEEEEecCCc--hH--HHHHHHHHHHhCCCCchheEEEEEcCCCchhHHHHHHHHHHH
Confidence 456899999999983 54 68888889999999999888844333344 66766666543
No 81
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B.
Probab=90.61 E-value=0.81 Score=46.33 Aligned_cols=50 Identities=14% Similarity=0.207 Sum_probs=39.8
Q ss_pred CCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEE
Q 006639 267 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFI 323 (637)
Q Consensus 267 ~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~V 323 (637)
..-|-++|.|++ .++++|++.+.-|..+.+++++.+++..|. .++++|.|
T Consensus 40 ~s~~~~yN~a~~----~a~~~ylvflHqDv~i~~~~~l~~il~~~~---~~~~~G~i 89 (217)
T PF13712_consen 40 KSMAAAYNEAME----KAKAKYLVFLHQDVFIINENWLEDILEIFE---EDPNIGMI 89 (217)
T ss_dssp S-TTTHHHHHGG----G--SSEEEEEETTEE-SSHHHHHHHHHHHH---H-TTEEEE
T ss_pred cCHHHHHHHHHH----hCCCCEEEEEeCCeEEcchhHHHHHHHHHh---hCCCccEE
Confidence 357889999999 799999999999999989999999999994 23677766
No 82
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=86.99 E-value=3.5 Score=44.39 Aligned_cols=46 Identities=20% Similarity=0.122 Sum_probs=32.6
Q ss_pred CCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006639 264 HPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 312 (637)
Q Consensus 264 ~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~ 312 (637)
.-..+|+-.|=-|+-... ....+||-.+|||.++ |.+..+.+--|.
T Consensus 139 ~VR~GKgEGMiiG~lLAk-~~g~~YVGFiDaDNyi--PGaV~EYvk~yA 184 (381)
T TIGR02460 139 RVRSGKGEGMLLGLLLAK-AIGAEYVGFVDADNYF--PGAVNEYVKIYA 184 (381)
T ss_pred ceecCcchHHHHHHHHHH-HhCCceEeEeecccCC--CchHHHHHHHHH
Confidence 334679988877654211 3577999999999997 577777666554
No 83
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This is the glycosyltransferase 48 family GT48 from CAZY, which consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase (2.4.1.34 from EC) also known as callose synthase catalyses the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall []. The reaction catalysed is:- UDP-glucose + {1,3-beta-D-glucosyl}(N) = UDP + {1,3-beta-D-glucosyl}(N+1).; GO: 0003843 1,3-beta-D-glucan synthase activity, 0006075 1,3-beta-D-glucan biosynthetic process, 0000148 1,3-beta-D-glucan synthase complex, 0016020 membrane
Probab=84.48 E-value=2.8 Score=49.92 Aligned_cols=75 Identities=20% Similarity=0.243 Sum_probs=49.2
Q ss_pred cccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCC-CHHHHHHHHHHHHhhhhHHHHhhcchhhhcccCCCcHHHHHHH
Q 006639 445 GATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASP-SGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAY 523 (637)
Q Consensus 445 ~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~-tl~~~~~QR~RWa~G~~qil~~~~~p~~~~~~~~L~~~qrl~y 523 (637)
-.+.||+.-|+....+|-++.|+. -...|..-+ .+..-..=-..-+.|+-+.++++.--.+. .+|.+..-|.+
T Consensus 408 lhLsEDIfaG~n~~lRGG~i~h~e---y~qcGKGRD~Gf~~I~~F~~KI~~G~GEQ~LSRe~yrLg---~~ld~~R~LSf 481 (817)
T PF02364_consen 408 LHLSEDIFAGMNATLRGGRIKHCE---YIQCGKGRDVGFNSILNFETKIASGMGEQMLSREYYRLG---TRLDFFRFLSF 481 (817)
T ss_pred ccccHHHHHHHHHHhcCCceeehh---hhhcccccccCchhhhhhHhHhcCCccchhhhHHHHHhh---ccCCHHHHHHH
Confidence 368999999999999999999984 122344432 22233333446688888777665322332 78888877775
Q ss_pred HH
Q 006639 524 LW 525 (637)
Q Consensus 524 l~ 525 (637)
..
T Consensus 482 yy 483 (817)
T PF02364_consen 482 YY 483 (817)
T ss_pred Hh
Confidence 43
No 84
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=81.91 E-value=6 Score=42.90 Aligned_cols=45 Identities=20% Similarity=0.134 Sum_probs=32.3
Q ss_pred CCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006639 265 PHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 312 (637)
Q Consensus 265 ~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~ 312 (637)
-..+|+-.|=-|+-... ....+||-.+|||.++ |.+..+.+--|.
T Consensus 141 VR~GKgEGMiiG~lLAk-~~g~~YVGFiDADNyi--PGaV~EYvk~yA 185 (393)
T PRK14503 141 VRSGKGEGMIIGLLLAK-ALGARYVGFVDADNYI--PGAVNEYVKIYA 185 (393)
T ss_pred eecCcchHHHHHHHHHH-HhCCCeEeEeecccCC--CchHHHHHHHHH
Confidence 34579988877654211 3577999999999997 577777666654
No 85
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=79.88 E-value=9.3 Score=45.10 Aligned_cols=46 Identities=17% Similarity=0.094 Sum_probs=33.0
Q ss_pred CCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006639 264 HPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 312 (637)
Q Consensus 264 ~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~ 312 (637)
.-..+|+-.|=-|+-... ....+||-.+|||.++ |.+..+.+-.|.
T Consensus 144 ~vr~gk~egm~~g~~la~-~~g~~yvgfidadny~--pg~v~ey~~~ya 189 (694)
T PRK14502 144 LIRSGKAEGMILGIILTM-FSGRDYVGFIDTDNYI--PGAVWEYAKHFA 189 (694)
T ss_pred ceecCcchHHHHHHHHHH-hcCCceEeEeeccCCC--CchHHHHHHHHH
Confidence 344689988877754211 4677999999999997 577777666654
No 86
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.
Probab=73.67 E-value=6.5 Score=40.02 Aligned_cols=53 Identities=13% Similarity=-0.145 Sum_probs=35.6
Q ss_pred chhHHHHHHHHhCCCeEEEeCCCCc----ee------eeccCCCHHHHHHHHHHHHhhhhHHH
Q 006639 448 AEDNLTGLVIHSKGWRSGYCLPIPH----AF------LGCASPSGPAGMRQQKRWATGLLEIL 500 (637)
Q Consensus 448 tED~~ts~rl~~~Gwr~~y~~~~~~----~~------~g~aP~tl~~~~~QR~RWa~G~~qil 500 (637)
.||-+++.||..+|.+......... +- ....|+-++....++.||+..++.-+
T Consensus 138 gEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~r~~~N~~r~~~l~~~~~~~~~dGLnsl 200 (219)
T cd00899 138 GEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDKRNRDNPNRFALLQNSRERDHSDGLNSL 200 (219)
T ss_pred cchHHHHHHHHHCCCeEEeccCcccceeeeecCCCcccccCHHHHHHHHhhCeEeccCCccce
Confidence 3899999999999998766532100 11 23345556666778888888877654
No 87
>PF13896 Glyco_transf_49: Glycosyl-transferase for dystroglycan
Probab=65.90 E-value=7.6 Score=41.69 Aligned_cols=46 Identities=15% Similarity=0.285 Sum_probs=33.3
Q ss_pred HHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEe
Q 006639 274 NVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQ 324 (637)
Q Consensus 274 N~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQ 324 (637)
|.|+. .+..+||+++|+|++ |.+++-.....+........+.++|=
T Consensus 120 NvAr~----~a~T~~v~~~DvD~~-ps~~l~~~l~~~~~~~~~~~~~a~Vv 165 (317)
T PF13896_consen 120 NVARS----GARTDYVFLLDVDFL-PSPGLYEKLLRFARRNIDKSKTAFVV 165 (317)
T ss_pred HHHHH----hcCcceEEEecceee-eCcchHHHHHHHhhhhccCCceEEEE
Confidence 55666 689999999999998 68888777666554322345677763
No 88
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=64.56 E-value=17 Score=39.54 Aligned_cols=43 Identities=19% Similarity=0.102 Sum_probs=28.4
Q ss_pred CCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006639 267 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 312 (637)
Q Consensus 267 ~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~ 312 (637)
++|+-.|=-|+-... ....+||-.+|||.++ |.+..+.+--|.
T Consensus 142 ~GKgEGMiiGillAk-~~g~~YVGFvDADNyi--PGaV~EYvk~yA 184 (381)
T PF09488_consen 142 NGKGEGMIIGILLAK-APGKRYVGFVDADNYI--PGAVNEYVKDYA 184 (381)
T ss_dssp SSHHHHHHHHHHHHH-HTT-SEEEE--TTBS---HHHHHHHHHHHH
T ss_pred cCchHHHHHHHHHHH-hcCCceEeEeeccCCC--cchHHHHHHHHH
Confidence 579998887764222 3677999999999996 777777665554
No 89
>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase. Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane
Probab=58.77 E-value=95 Score=35.57 Aligned_cols=37 Identities=14% Similarity=0.272 Sum_probs=32.0
Q ss_pred CCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHH
Q 006639 267 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQA 307 (637)
Q Consensus 267 ~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~ 307 (637)
-.++.+|+.|++. ..+.+++...|.|+.. .++||.+.
T Consensus 326 fsr~~~Ld~g~~~---~~~d~L~f~~Dvd~~f-~~~fL~rc 362 (499)
T PF05679_consen 326 FSRGAALDVGAKK---FPPDSLLFFCDVDMVF-TSDFLNRC 362 (499)
T ss_pred ccHHHHHHhhccc---CCCCcEEEEEeCCccc-CHHHHHHH
Confidence 3689999999884 5677999999999997 79999985
No 90
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GNT-I, GLCNAC-T I) 2.4.1.101 from EC transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide. This is an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus, and is probably distributed in all tissues. The catalytic domain is located at the C terminus []. These proteins are members of the glycosyl transferase family 13 (GH13 from CAZY); GO: 0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0000139 Golgi membrane; PDB: 2APC_A 2AM4_A 1FO9_A 2AM3_A 1FOA_A 2AM5_A 1FO8_A.
Probab=57.64 E-value=9.1 Score=42.83 Aligned_cols=51 Identities=24% Similarity=0.216 Sum_probs=31.1
Q ss_pred CCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCC-CCeEEEEecCCCCcchHHH
Q 006639 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPV-HKLACYVSDDACSPLNFYS 145 (637)
Q Consensus 90 ~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~-~kl~vyv~DDg~~~~t~~~ 145 (637)
...|.+-|+|-+|| =| .-+.+||.+++... |. +++.|+|+.||....|.+.
T Consensus 90 ~~~~~~pVlV~AcN---Rp-~yl~r~L~sLl~~r-p~~~~fpIiVSQDg~~~~~~~v 141 (434)
T PF03071_consen 90 NKEPVIPVLVFACN---RP-DYLRRTLDSLLKYR-PSAEKFPIIVSQDGDDEEVAEV 141 (434)
T ss_dssp -------EEEEESS----T-T-HHHHHHHHHHH--S-TTTS-EEEEE-TT-HHHHHH
T ss_pred cCCCcceEEEEecC---Cc-HHHHHHHHHHHHcC-CCCCCccEEEEecCCcHHHHHH
Confidence 34678889999999 55 47999999999987 54 5888999999998866433
No 91
>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2.4.1.16 from EC. Chitin a linear homopolymer of GlcNAc residues, it is an important component of the cell wall of fungi and is synthesised on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases []. ; GO: 0004100 chitin synthase activity, 0006031 chitin biosynthetic process
Probab=55.88 E-value=1.2e+02 Score=29.68 Aligned_cols=28 Identities=4% Similarity=-0.027 Sum_probs=23.8
Q ss_pred CCCCCEEEEecCCCCCCchHHHHHHHHHh
Q 006639 283 MTNAPFMLNVDCDMYANNPEIVLQAMCLH 311 (637)
Q Consensus 283 ~s~~e~i~v~DAD~~~p~pd~L~~~v~~f 311 (637)
+-+.++++.+||-+. |.++.|-++...|
T Consensus 136 ~l~P~vcvllDvGT~-P~~~siy~Lwkaf 163 (163)
T PF01644_consen 136 QLQPNVCVLLDVGTK-PGKDSIYHLWKAF 163 (163)
T ss_pred hcCCcEEEEEecCCC-cCchHHHHHHhhC
Confidence 679999999999998 7999998875443
No 92
>PRK09382 ispDF bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional
Probab=50.71 E-value=39 Score=37.29 Aligned_cols=58 Identities=12% Similarity=0.110 Sum_probs=39.7
Q ss_pred chHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhcc-------------------CCCCcEEEEeCCccc
Q 006639 269 KAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGS-------------------KNENEFAFIQSPQYF 329 (637)
Q Consensus 269 KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~-------------------~~~~~va~VQtPq~f 329 (637)
....+-+|++. .+.+++++.|||+-.-+++.+.+++..+.+. -....+-.+||||.|
T Consensus 83 r~~SV~~gL~~----l~~d~VLVhdadrPfv~~e~I~~li~~~~~~~a~i~~~pv~Dtik~~~~tldR~~l~~~QTPQ~f 158 (378)
T PRK09382 83 RQESVRNALEA----LDSEYVLIHDAARPFVPKELIDRLIEALDKADCVLPALPVADTLKRANETVDREGLKLIQTPQLS 158 (378)
T ss_pred HHHHHHHHHHh----cCCCeEEEeeccccCCCHHHHHHHHHHhhcCCeEEEEEEeccCcEEeeeEcCcccEEEEECCCCC
Confidence 45678888873 3459999999996333789999888766421 013355567888877
Q ss_pred c
Q 006639 330 Y 330 (637)
Q Consensus 330 ~ 330 (637)
.
T Consensus 159 ~ 159 (378)
T PRK09382 159 R 159 (378)
T ss_pred C
Confidence 4
No 93
>PF06306 CgtA: Beta-1,4-N-acetylgalactosaminyltransferase (CgtA); InterPro: IPR010446 This family consists of several beta-1,4-N-acetylgalactosaminyltransferase proteins from Campylobacter jejuni [].
Probab=36.26 E-value=1.1e+02 Score=33.15 Aligned_cols=37 Identities=8% Similarity=0.174 Sum_probs=28.6
Q ss_pred CCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHH
Q 006639 266 HHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQ 306 (637)
Q Consensus 266 ~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~ 306 (637)
.|.+..=-|+.+.. .+.+++++=+||||+- +++-|.+
T Consensus 159 ~n~l~~YYNy~ls~---ipk~~w~iKID~DhIy-~~~KL~k 195 (347)
T PF06306_consen 159 ENSLYNYYNYVLSF---IPKNEWAIKIDADHIY-DTKKLYK 195 (347)
T ss_pred hhhhhhhhhhhhcc---cccceEEEEeccceee-cHHHHhh
Confidence 34577778888873 4689999999999994 8877654
No 94
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial. In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulfoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. The family described here contains MobA, molybdopterin-guanine dinucleotide biosynthesis protein A, from the Proteobacteria only. MobA can reconstitute molybdopterin-guanine dinucleotide biosynthesis without the product of the neighboring gene MobB. The probable MobA proteins of other lineages differ sufficiently that they are not included in scope of this family.
Probab=31.52 E-value=1.7e+02 Score=27.90 Aligned_cols=42 Identities=14% Similarity=0.103 Sum_probs=33.1
Q ss_pred CCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006639 267 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 312 (637)
Q Consensus 267 ~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~ 312 (637)
.+-.+++-.|+. ..+.+.+++++||+-.-+++.+++++-.+.
T Consensus 73 ~g~~~si~~al~----~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~ 114 (186)
T TIGR02665 73 PGPLAGILAGLR----WAGTDWVLTVPCDTPFLPEDLVARLAAALE 114 (186)
T ss_pred CCCHHHHHHHHH----hcCCCeEEEEecCCCcCCHHHHHHHHHHhh
Confidence 467888888888 346789999999993237999999888775
No 95
>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases. The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....
Probab=31.36 E-value=44 Score=28.27 Aligned_cols=40 Identities=15% Similarity=-0.026 Sum_probs=25.1
Q ss_pred hhhHHHHhHhhcccccccccccccccccCcccc---hhHHHHHHHHhCCCeEEEeCC
Q 006639 416 SRSLDEAHRVADCGYEYGSSWGDEVGCLYGATA---EDNLTGLVIHSKGWRSGYCLP 469 (637)
Q Consensus 416 ~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~slt---ED~~ts~rl~~~Gwr~~y~~~ 469 (637)
...++...+|| ||++.-.. ||.+++.|+..+|.++...+.
T Consensus 25 ~~~~~~f~~vn--------------Gfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~ 67 (78)
T PF02709_consen 25 AISREDFEKVN--------------GFDERFWGWGGEDDDLYNRLWKAGLKIVRVPG 67 (78)
T ss_dssp EEEHHHHHHTT--------------SS-SS-TSCSSHHHHHHHHHHHTT---B-SST
T ss_pred EEeHHHHHHcC--------------CCCccccccCccHHHHHHHHHHcCCeEEecCC
Confidence 34566677887 56654433 999999999999998777543
No 96
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]
Probab=27.32 E-value=3.7e+02 Score=28.51 Aligned_cols=57 Identities=12% Similarity=0.195 Sum_probs=32.2
Q ss_pred CCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHH
Q 006639 249 EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAM 308 (637)
Q Consensus 249 ~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v 308 (637)
.+|++.|++=......... +---|+|..-|--..+..+|+.+|+|++. ..|-..+++
T Consensus 60 ~~~~~~yl~~~s~~~F~s~--~~c~n~ga~Ysh~~~~Sn~vlFlDvDc~~-S~dnF~k~l 116 (346)
T COG4092 60 PMPRVLYLDFGSPEPFASE--TICANNGADYSHEKCESNLVLFLDVDCFG-SSDNFAKML 116 (346)
T ss_pred cccceEEEecCCCccccch--hhhhhccchhhhccccccEEEEEeccccc-cHHHHHHHH
Confidence 4577888876443222212 22334444422113468999999999997 444444444
No 97
>PF02434 Fringe: Fringe-like; InterPro: IPR003378 The Notch receptor is a large, cell surface transmembrane protein involved in a wide variety of developmental processes in higher organisms []. It becomes activated when its extracellular region binds to ligands located on adjacent cells. Much of this extracellular region is composed of EGF-like repeats, many of which can be O-fucosylated. A number of these O-fucosylated repeats can in turn be further modified by the action of a beta-1,3-N-acetylglucosaminyltransferase enzyme known as Fringe []. Fringe potentiates the activation of Notch by Delta ligands, while inhibiting activation by Serrate/Jagged ligands. This regulation of Notch signalling by Fringe is important in many processes []. Four distinct Fringe proteins have so far been studied in detail; Drosophila Fringe (Dfng) and its three mammalian homologues Lunatic Fringe (Lfng), Radical Fringe (Rfng) and Manic Fringe (Mfng). Dfng, Lfng and Rfng have all been shown to play important roles in developmental processes within their host, though the phenotype of mutants can vary between species e.g. Rfng mutants are retarded in wing development in chickens, but have no obvious phenotype in mice [, , ]. Mfng mutants have not, so far, been charcterised. Biochemical studies indicate that the Fringe proteins are fucose-specific transferases requiring manganese for activity and utilising UDP-N-acetylglucosamine as a donor substrate []. The three mammalian proteins show distinct variations in their catalytic efficiencies with different substrates. Dfng is a glucosaminyltransferase that controls the response of the Notch receptor to specific ligands which is localised to the Golgi apparatus [] (not secreted as previously thought). Modification of Notch occurs through glycosylation by Dfng. This entry consists of Fringe proteins and related glycosyltransferase enzymes including: Beta-1,3-glucosyltransferase, which glucosylates O-linked fucosylglycan on thrombospondin type 1 repeat domains []. Core 1 beta1,3-galactosyltransferase 1, generates the core T antigen, which is a precursor for many extended O-glycans in glycoproteins and plays a central role in many processes, such as angiogenesis, thrombopoiesis and kidney homeostasis development []. ; GO: 0016757 transferase activity, transferring glycosyl groups, 0016020 membrane; PDB: 2J0B_A 2J0A_A.
Probab=25.58 E-value=1.8e+02 Score=30.12 Aligned_cols=28 Identities=18% Similarity=0.170 Sum_probs=22.2
Q ss_pred CCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006639 284 TNAPFMLNVDCDMYANNPEIVLQAMCLHL 312 (637)
Q Consensus 284 s~~e~i~v~DAD~~~p~pd~L~~~v~~f~ 312 (637)
++.+.++.+|-|+++ ..+-|++.+.-|-
T Consensus 85 ~~~~Wf~~~DDDtyv-~~~~L~~~L~~~~ 112 (252)
T PF02434_consen 85 SDKDWFCFADDDTYV-NVENLRRLLSKYD 112 (252)
T ss_dssp HT-SEEEEEETTEEE--HHHHHHHHTTS-
T ss_pred CCceEEEEEeCCcee-cHHHHHHHHhhCC
Confidence 678999999999998 7888888877663
No 98
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU. The N-terminal domain of N-Acetylglucosamine-1-phosphate uridyltransferase (GlmU). GlmU is an essential bacterial enzyme with both an acetyltransferase and an uridyltransferase activity which have been mapped to the C-terminal and N-terminal domains, respectively. This family represents the N-terminal uridyltransferase. GlmU performs the last two steps in the synthesis of UDP-N-acetylglucosamine (UDP-GlcNAc), which is an essential precursor in both the peptidoglycan and the lipopolysaccharide metabolic pathways in Gram-positive and Gram-negative bacteria, respectively.
Probab=24.94 E-value=2.6e+02 Score=27.41 Aligned_cols=43 Identities=14% Similarity=0.050 Sum_probs=32.8
Q ss_pred CCchHHHHHHHHhcCCCC-CCCEEEEecCCC-CCCchHHHHHHHHHhhc
Q 006639 267 HYKAGAMNVLTRVSGLMT-NAPFMLNVDCDM-YANNPEIVLQAMCLHLG 313 (637)
Q Consensus 267 ~~KAGaLN~~L~~s~~~s-~~e~i~v~DAD~-~~p~pd~L~~~v~~f~d 313 (637)
.+.++++-+++.. .. +.+.+++++||+ ++ +++.+.+++..+.+
T Consensus 73 ~g~~~ai~~a~~~---~~~~~~~vli~~~D~p~~-~~~~i~~l~~~~~~ 117 (229)
T cd02540 73 LGTGHAVKQALPA---LKDFEGDVLVLYGDVPLI-TPETLQRLLEAHRE 117 (229)
T ss_pred CCCHHHHHHHHHh---hccCCCeEEEEeCCcccc-CHHHHHHHHHHHHh
Confidence 3689999999883 22 268999999999 33 57888888887763
No 99
>PF12804 NTP_transf_3: MobA-like NTP transferase domain; PDB: 3FWW_A 2XME_D 2XMH_C 2DPW_A 2WAW_A 2OI5_B 1HV9_B 1FWY_A 2OI6_A 2OI7_B ....
Probab=23.89 E-value=2.3e+02 Score=26.23 Aligned_cols=53 Identities=9% Similarity=0.038 Sum_probs=39.6
Q ss_pred CCchHHHHHHHHhcCCCC-CCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeC
Q 006639 267 HYKAGAMNVLTRVSGLMT-NAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQS 325 (637)
Q Consensus 267 ~~KAGaLN~~L~~s~~~s-~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQt 325 (637)
.+=+.++=.|+. .. +.+.++++-||+..-+++.+.+++..+.+ .+.+++++.+
T Consensus 70 ~G~~~sl~~a~~----~~~~~~~vlv~~~D~p~~~~~~l~~l~~~~~~--~~~~i~~~~~ 123 (160)
T PF12804_consen 70 QGPLASLLAALS----QLPSSEPVLVLPCDQPFLSPELLRRLLEALEK--SPADIVVPVF 123 (160)
T ss_dssp CSHHHHHHHHHH----TSTTSSEEEEEETTETTS-HHHHHHHHHHHHH--TTTSEEEEEE
T ss_pred CChHHHHHHHHH----hcccCCCcEEEeCCccccCHHHHHHHHHHHhc--cCCcEEEEEE
Confidence 356778888887 34 89999999999943479999999988863 2356776664
No 100
>PF04724 Glyco_transf_17: Glycosyltransferase family 17; InterPro: IPR006813 This family represents beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase (2.4.1.144 from EC). This enzyme transfers the bisecting GlcNAc to the core mannose of complex N-glycans. The addition of this residue is regulated during development and has functional consequences for receptor signalling, cell adhesion, and tumour progression [, ].; GO: 0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity, 0006487 protein N-linked glycosylation, 0016020 membrane
Probab=22.57 E-value=1.4e+02 Score=32.67 Aligned_cols=35 Identities=26% Similarity=0.420 Sum_probs=26.5
Q ss_pred HHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHH
Q 006639 271 GAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQA 307 (637)
Q Consensus 271 GaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~ 307 (637)
.+|+..++..+ ...+|+|++=|+|-| |+|+.|+.+
T Consensus 165 ~~l~~l~~~~~-~~~dDliivSDvDEI-P~p~~l~~L 199 (356)
T PF04724_consen 165 NALNGLLRLAG-IQDDDLIIVSDVDEI-PSPETLKFL 199 (356)
T ss_pred HHHHHHhhhcC-CCCCCEEEEcCcccc-cCHHHHHHH
Confidence 45555555445 578999999999999 699888754
No 101
>cd02503 MobA MobA catalyzes the formation of molybdopterin guanine dinucleotide. The prokaryotic enzyme molybdopterin-guanine dinucleotide biosynthesis protein A (MobA). All mononuclear molybdoenzymes bind molybdenum in complex with an organic cofactor termed molybdopterin (MPT). In many bacteria, including Escherichia coli, molybdopterin can be further modified by attachment of a GMP group to the terminal phosphate of molybdopterin to form molybdopterin guanine dinucleotide (MGD). This GMP attachment step is catalyzed by MobA, by linking a guanosine 5'-phosphate to MPT forming molybdopterin guanine dinucleotide. This reaction requires GTP, MgCl2, and the MPT form of the cofactor. It is a reaction unique to prokaryotes, and therefore may represent a potential drug target.
Probab=22.36 E-value=3.2e+02 Score=25.86 Aligned_cols=41 Identities=20% Similarity=0.267 Sum_probs=33.3
Q ss_pred CCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHh
Q 006639 267 HYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLH 311 (637)
Q Consensus 267 ~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f 311 (637)
.+-.+.+..|++ ..+.+.+++++||+-.-+++.+++++-.+
T Consensus 69 ~G~~~si~~~l~----~~~~~~vlv~~~D~P~i~~~~i~~l~~~~ 109 (181)
T cd02503 69 KGPLAGILAALR----AAPADWVLVLACDMPFLPPELLERLLAAA 109 (181)
T ss_pred CCCHHHHHHHHH----hcCCCeEEEEeCCcCCCCHHHHHHHHHhh
Confidence 467789999998 45689999999999433789999888766
No 102
>PF11316 Rhamno_transf: Putative rhamnosyl transferase ; InterPro: IPR021466 This bacterial family of proteins has no known function.
Probab=22.03 E-value=8.7e+02 Score=24.92 Aligned_cols=42 Identities=17% Similarity=0.050 Sum_probs=29.6
Q ss_pred chHHHHHHHHhcCCCCCCCEEEEe--cCCCCCCchHHHHHHHHHhh
Q 006639 269 KAGAMNVLTRVSGLMTNAPFMLNV--DCDMYANNPEIVLQAMCLHL 312 (637)
Q Consensus 269 KAGaLN~~L~~s~~~s~~e~i~v~--DAD~~~p~pd~L~~~v~~f~ 312 (637)
...++..+++... ...+++++.+ |.|--+ ..||++++-.++.
T Consensus 97 ~~~~~~~~~~~~~-~~~~~~~~~~RLDdDDAl-~~dFV~rlr~~a~ 140 (234)
T PF11316_consen 97 HRDAMRRAINAAR-RDGADPVLQFRLDDDDAL-HRDFVARLRRAAA 140 (234)
T ss_pred HHHHHHHHHhhhc-cCCCCEEEEEEECCcchh-hHHHHHHHHHHHH
Confidence 4567777764221 3566777766 997776 8999999888875
No 103
>cd02516 CDP-ME_synthetase CDP-ME synthetase is involved in mevalonate-independent isoprenoid production. 4-diphosphocytidyl-2-methyl-D-erythritol synthase (CDP-ME), also called 2C-methyl-d-erythritol 4-phosphate cytidylyltransferase catalyzes the third step in the alternative (non-mevalonate) pathway of Isopentenyl diphosphate (IPP) biosynthesis: the formation of 4-diphosphocytidyl-2C-methyl-D-erythritol from CTP and 2C-methyl-D-erythritol 4-phosphate. This mevalonate independent pathway that utilizes pyruvate and glyceraldehydes 3-phosphate as starting materials for production of IPP occurs in a variety of bacteria, archaea and plant cells, but is absent in mammals. Thus, CDP-ME synthetase is an attractive targets for the structure-based design of selective antibacterial, herbicidal and antimalarial drugs.
Probab=21.21 E-value=2.4e+02 Score=27.55 Aligned_cols=44 Identities=9% Similarity=-0.022 Sum_probs=32.8
Q ss_pred CchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006639 268 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 312 (637)
Q Consensus 268 ~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~ 312 (637)
+...++..|++... ..+.+.+++.|||+=.-+++.+++++..+.
T Consensus 79 ~~~~si~~al~~~~-~~~~~~vlv~~~D~P~i~~~~i~~li~~~~ 122 (218)
T cd02516 79 TRQDSVLNGLKALP-DADPDIVLIHDAARPFVSPELIDRLIDALK 122 (218)
T ss_pred HHHHHHHHHHHhcc-cCCCCEEEEccCcCCCCCHHHHHHHHHHHh
Confidence 35778888888310 026789999999975447899999988775
No 104
>TIGR03584 PseF pseudaminic acid CMP-transferase. The sequences in this family include the pfam02348 (cytidyltransferase) domain and are homologous to the NeuA protein responsible for the transfer of CMP to neuraminic acid. According to, this gene is responsible for the transfer of CMP to the structurally related sugar, pseudaminic acid which is observed as a component of sugar modifications of flagellin in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci.
Probab=21.20 E-value=8.4e+02 Score=24.43 Aligned_cols=58 Identities=10% Similarity=-0.065 Sum_probs=39.0
Q ss_pred CchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeC
Q 006639 268 YKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQS 325 (637)
Q Consensus 268 ~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQt 325 (637)
+....+.+++.......+.+.|++++||+=.=.++.+.+++-.|.+...+--+..+..
T Consensus 77 ~~~~si~~~l~~l~~~~~~d~v~~l~~tsPl~~~~~I~~~i~~~~~~~~ds~~sv~~~ 134 (222)
T TIGR03584 77 GTAPVVKHAIEELKLQKQYDHACCIYATAPFLQAKILKEAFELLKQPNAHFVFSVTSF 134 (222)
T ss_pred CchHHHHHHHHHHhhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeecc
Confidence 4667777777631101347999999999977788999999998875322333444443
Done!