Query 006639
Match_columns 637
No_of_seqs 275 out of 1648
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 04:59:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/006639.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/006639hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 2.6E-49 9E-54 464.6 45.0 430 21-635 64-514 (802)
2 1xhb_A Polypeptide N-acetylgal 99.8 2.8E-17 9.6E-22 181.0 22.5 122 89-323 25-148 (472)
3 2z86_A Chondroitin synthase; G 99.8 1E-17 3.4E-22 190.8 19.4 126 90-330 90-215 (625)
4 1qg8_A Protein (spore coat pol 99.7 3E-18 1E-22 171.9 9.8 220 93-495 1-235 (255)
5 3bcv_A Putative glycosyltransf 99.7 8.2E-17 2.8E-21 159.6 15.7 109 91-313 3-111 (240)
6 2d7i_A Polypeptide N-acetylgal 99.7 1.8E-16 6.2E-21 179.4 18.3 115 89-313 108-223 (570)
7 2z86_A Chondroitin synthase; G 99.7 7.8E-17 2.7E-21 183.4 13.5 221 91-500 373-598 (625)
8 2ffu_A Ppgalnact-2, polypeptid 99.7 3E-16 1E-20 174.4 17.0 112 89-313 62-173 (501)
9 3ckj_A Putative uncharacterize 99.5 3.2E-13 1.1E-17 142.2 14.1 124 90-326 45-169 (329)
10 4fix_A UDP-galactofuranosyl tr 99.5 2.1E-13 7.2E-18 156.7 13.5 124 91-324 178-303 (657)
11 3l7i_A Teichoic acid biosynthe 99.4 1.4E-14 4.8E-19 168.3 0.0 108 93-312 2-109 (729)
12 2fy7_A Beta-1,4-galactosyltran 99.4 9.4E-13 3.2E-17 136.8 8.6 60 441-500 191-263 (287)
13 3f1y_A Mannosyl-3-phosphoglyce 99.3 2.2E-11 7.6E-16 131.5 13.5 123 90-325 91-216 (387)
14 2nxv_A ATP synthase subunits r 99.0 4.2E-09 1.4E-13 106.3 15.2 51 269-324 62-113 (249)
15 2bo4_A Mannosylglycerate synth 98.7 6.6E-07 2.2E-11 96.8 19.3 41 267-312 74-119 (397)
16 2zu9_A Mannosyl-3-phosphoglyce 97.9 6.5E-05 2.2E-09 80.7 12.6 40 267-312 143-185 (394)
17 2wvl_A Mannosyl-3-phosphoglyce 97.8 2.4E-05 8.3E-10 82.4 7.7 44 90-142 50-93 (391)
18 1fo8_A Alpha-1,3-mannosyl-glyc 97.8 7.5E-05 2.6E-09 79.1 10.8 46 92-142 1-46 (343)
19 3q80_A 2-C-methyl-D-erythritol 39.0 51 0.0018 32.0 6.6 45 269-313 83-127 (231)
20 3d5n_A Q97W15_sulso; NESG, SSR 31.7 77 0.0026 29.5 6.3 40 268-311 72-112 (197)
21 3f1c_A Putative 2-C-methyl-D-e 28.3 53 0.0018 31.8 4.7 46 268-313 84-132 (246)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=2.6e-49 Score=464.65 Aligned_cols=430 Identities=21% Similarity=0.293 Sum_probs=327.4
Q ss_pred HHHHHHH-HHHHHHHHHHHHHhccccCch------hHHHHHHHHHHHHHHHHHHHHHheeccccCCCCcchhhcccCCCC
Q 006639 21 YHRALDV-IILFLLLCLLFYRLSTLKNHG------FAWFLAFLCESCFTFIWILIVNCKWTPLTYKTYPQRLQERIQELP 93 (637)
Q Consensus 21 ~~r~~~~-~~~~~~~~yl~wR~~~~~~~~------~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~~P 93 (637)
..|++.+ +.+++.++|++||++.+++.. +.|++++++|+++.+.|++..+..++|..|...++. .+++.|
T Consensus 64 ~~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~---~~~~~P 140 (802)
T 4hg6_A 64 VPRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL---QPEELP 140 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC---CTTTCC
T ss_pred chHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC---CccCCC
Confidence 3455544 444556899999999998842 346789999999999999999999999888775543 246789
Q ss_pred ceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCcc
Q 006639 94 PVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFRY 173 (637)
Q Consensus 94 ~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~y 173 (637)
.|+|+||||| |+++++.+|+.|+++++||.++++|+|+|||++|.|.+.
T Consensus 141 ~VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~---------------------------- 189 (802)
T 4hg6_A 141 TVDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS---------------------------- 189 (802)
T ss_dssp CEEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC----------------------------
T ss_pred cEEEEEEECC---CCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc----------------------------
Confidence 9999999999 888888999999999999999999999999999987421
Q ss_pred CCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCeE
Q 006639 174 FPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPHL 253 (637)
Q Consensus 174 f~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~l 253 (637)
.+++.+++.++...+.++++++. + +
T Consensus 190 ---------~d~~i~~~~~~~~~~l~~~~~~~-------------~---------------------------------v 214 (802)
T 4hg6_A 190 ---------PDPELAQKAQERRRELQQLCREL-------------G---------------------------------V 214 (802)
T ss_dssp ---------SSHHHHHHHHHHHHHHHHHHHHH-------------T---------------------------------C
T ss_pred ---------CCHHHHHHHHhhhHHHHHHHHhc-------------C---------------------------------c
Confidence 12333333332222233232221 1 4
Q ss_pred EEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcccc--C
Q 006639 254 VYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY--D 331 (637)
Q Consensus 254 ~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~--D 331 (637)
.|+.|+++ +++|+||+|.|++ .+++|||+++|||+++ +||+|++++.+|.+ ++++++||+|+.+. |
T Consensus 215 ~~i~~~~~----~~GKa~alN~gl~----~a~gd~Il~lDaD~~~-~pd~L~~lv~~~~~---dp~v~~V~~~~~~~~~~ 282 (802)
T 4hg6_A 215 VYSTRERN----EHAKAGNMSAALE----RLKGELVVVFDADHVP-SRDFLARTVGYFVE---DPDLFLVQTPHFFINPD 282 (802)
T ss_dssp EEEECSSC----CSHHHHHHHHHHH----HCCCSEEEECCTTEEE-CTTHHHHHHHHHHH---SSSCCEEECCCCBSSCC
T ss_pred EEEEecCC----CCcchHHHHHHHH----hcCCCEEEEECCCCCc-ChHHHHHHHHHHhc---CCCeEEEeccEEEeCCc
Confidence 77888653 4689999999999 6899999999999995 89999999999962 47899999999988 3
Q ss_pred cch----------h-hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHH
Q 006639 332 RPE----------N-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSA 400 (637)
Q Consensus 332 ~~~----------~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~ 400 (637)
+.. + ...++...+.+.+.+++.+++|+++++||+++.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~-------------------------------- 330 (802)
T 4hg6_A 283 PIQRNLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALD-------------------------------- 330 (802)
T ss_dssp HHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHH--------------------------------
T ss_pred hHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHH--------------------------------
Confidence 322 1 467888999999999999999999999999884
Q ss_pred HHhhcCCcCCCCCchhhhHHHHhHhhcccccccccccccccccCcccchhHHHHHHHHhCCCeEEEeCCCCceeeeccCC
Q 006639 401 AQTLEGKTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYGATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCASP 480 (637)
Q Consensus 401 ~~~~~g~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP~ 480 (637)
++| ||++++++||.+++++++++||++.|++ ++.+++++|+
T Consensus 331 -----------------------~vG--------------gf~~~~~~ED~~l~~rl~~~G~ri~~~~--~~~~~~~~p~ 371 (802)
T 4hg6_A 331 -----------------------EAG--------------GFAGETITEDAETALEIHSRGWKSLYID--RAMIAGLQPE 371 (802)
T ss_dssp -----------------------HHT--------------TCCCSSSSHHHHHHHHHHTTTCCEEECC--CCCEEECCCC
T ss_pred -----------------------HcC--------------CcCCCCcchHHHHHHHHHHcCCeEEEec--CCEEEecCCC
Confidence 243 7999999999999999999999999996 4689999999
Q ss_pred CHHHHHHHHHHHHhhhhHHHHhhcchhhhcccCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCccccccCch
Q 006639 481 SGPAGMRQQKRWATGLLEILFSKRNPILATLIGKLQFRQCLAYLWILTWGLRSIPELCYIALPAYCIITNSTFLPKVQEP 560 (637)
Q Consensus 481 tl~~~~~QR~RWa~G~~qil~~~~~p~~~~~~~~L~~~qrl~yl~~~~~~~~~l~~l~~~l~P~l~Ll~g~~i~p~~~~~ 560 (637)
|++++++||.||++|.+|++++ ++|++. +++++.||+.|+..+.+++.+++.++++++|+++++++..+++.....
T Consensus 372 t~~~~~~Qr~RW~~G~~q~l~~-~~pl~~---~~l~~~~rl~~l~~~~~~~~~~~~li~ll~p~~~ll~~~~~~~~~~~~ 447 (802)
T 4hg6_A 372 TFASFIQQRGRWATGMMQMLLL-KNPLFR---RGLGIAQRLCYLNSMSFWFFPLVRMMFLVAPLIYLFFGIEIFVATFEE 447 (802)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-SCTTSC---SSCCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHCCCCSCCCHHH
T ss_pred CHHHHHHHHHHHHccHHHHHHH-hCcccc---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhcCHHH
Confidence 9999999999999999999975 678775 789999999999998899999999999999999999997666542111
Q ss_pred hhHHHHHHHHHHHHHHHHHH-HHhCCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeeCcCCCcCcc
Q 006639 561 TVLIPLALFLIYKLYTLLEY-IQAGLSIRSWWVNNCMARIVTTSAWLFGLVNAALEQFGFSEAVFEITQKIHRSQR 635 (637)
Q Consensus 561 ~~~~l~~~fl~~~l~~ll~~-~~~G~~~~~~w~~~~~w~i~~~~a~l~a~~~a~~~~l~~~~~~F~VTpKg~~~~~ 635 (637)
+...++++++..++.. ...|.....|| ...++.+. + ++.+...+..++++++.+|+||+||...++
T Consensus 448 ----~~~~~lp~~l~~~~~~~~~~~~~r~~~~-~~l~~~~~---~-~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~ 514 (802)
T 4hg6_A 448 ----VLAYMPGYLAVSFLVQNALFARQRWPLV-SEVYEVAQ---A-PYLARAIVTTLLRPRSARFAVTAKDETLSE 514 (802)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHTTTSCTTH-HHHHHHHH---H-HHHHHHHHHHHHSTTCCCCCCCCCCCCCSS
T ss_pred ----HHHHHHHHHHHHHHHHHHHhcCcHHHHH-HHHHHHHH---H-HHHHHHHHHHHhCCCCCcceECCCCccccc
Confidence 1223333333322221 22232223344 33333221 1 222223334456778899999999986654
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.76 E-value=2.8e-17 Score=181.02 Aligned_cols=122 Identities=12% Similarity=0.008 Sum_probs=95.7
Q ss_pred cCCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcc-hHHHHHHHHhhhhhhhhhhhhccccc
Q 006639 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPL-NFYSLVEASKFAKLWVPFCKKYNVQI 167 (637)
Q Consensus 89 ~~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~-t~~~l~ea~~fa~~w~pfc~~~~v~~ 167 (637)
++++|.|+|+||+|| |+.+.+.+||.|+++.+||...++|+|+|||++|. |.+.+.+..
T Consensus 25 ~~~~p~vSVIIp~yN---~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~----------------- 84 (472)
T 1xhb_A 25 PDNLPTTSVVIVFHN---EAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYV----------------- 84 (472)
T ss_dssp CSCCCCEEEEEEESS---CCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHH-----------------
T ss_pred CcCCCCeEEEEEeCC---CCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHH-----------------
Confidence 457899999999999 77679999999999999996568999999999984 644443210
Q ss_pred cCCCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCC
Q 006639 168 RAPFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLS 247 (637)
Q Consensus 168 r~p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 247 (637)
+
T Consensus 85 --------------------------------------~----------------------------------------- 85 (472)
T 1xhb_A 85 --------------------------------------K----------------------------------------- 85 (472)
T ss_dssp --------------------------------------H-----------------------------------------
T ss_pred --------------------------------------H-----------------------------------------
Confidence 0
Q ss_pred CCCC-eEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEE
Q 006639 248 DEIP-HLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFI 323 (637)
Q Consensus 248 ~~~p-~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~V 323 (637)
..| ++.++..+++ .++++|+|.|++ .++||||+++|+|.++ +|++|.+++..+.+ ++.++.+
T Consensus 86 -~~~~~v~vi~~~~n-----~G~~~a~N~g~~----~A~gd~i~flD~D~~~-~p~~L~~ll~~~~~---~~~~~v~ 148 (472)
T 1xhb_A 86 -KLKVPVHVIRMEQR-----SGLIRARLKGAA----VSRGQVITFLDAHCEC-TAGWLEPLLARIKH---DRRTVVC 148 (472)
T ss_dssp -SSSSCEEEEECSSC-----CCHHHHHHHHHH----HCCSSEEEEEESSEEE-CTTCHHHHHHHHHH---CTTEEEE
T ss_pred -HCCCcEEEEECCCC-----CChHHHHHHHHH----hccCCeEEEECCCeEe-CccHHHHHHHHHHh---CCCEEEE
Confidence 012 3566665543 369999999999 6899999999999995 89999999999973 3445543
No 3
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.76 E-value=1e-17 Score=190.78 Aligned_cols=126 Identities=18% Similarity=0.176 Sum_probs=99.3
Q ss_pred CCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccC
Q 006639 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRA 169 (637)
Q Consensus 90 ~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~ 169 (637)
...|.|+|+||||| |+ +.+.+||.|+++++||. .++|+|+|||++|.|.+.+.+
T Consensus 90 ~~~p~vsviIp~~n---~~-~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~~~~--------------------- 143 (625)
T 2z86_A 90 LIIDGLSIVIPTYN---RA-KILAITLACLCNQKTIY-DYEVIVADDGSKENIEEIVRE--------------------- 143 (625)
T ss_dssp CCCCCEEEEEEESS---CH-HHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHHHHT---------------------
T ss_pred ccCCcEEEEEecCC---cH-HHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHHHHH---------------------
Confidence 34689999999999 75 69999999999999986 799999999999977433321
Q ss_pred CCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCC
Q 006639 170 PFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDE 249 (637)
Q Consensus 170 p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 249 (637)
+ . .
T Consensus 144 --------------------------------------~----------~-----------------------------~ 146 (625)
T 2z86_A 144 --------------------------------------F----------E-----------------------------S 146 (625)
T ss_dssp --------------------------------------T----------T-----------------------------T
T ss_pred --------------------------------------h----------h-----------------------------h
Confidence 0 0 0
Q ss_pred CCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccc
Q 006639 250 IPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYF 329 (637)
Q Consensus 250 ~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f 329 (637)
.+++.|+.+++ +.++|++|+|.|++ .+++|||+++|+|.++ .|++|.+++..|.+ ++.+++|+..+.+
T Consensus 147 ~~~i~~i~~~~----~~~g~~~a~N~g~~----~a~g~~v~~lD~D~~~-~~~~l~~~~~~~~~---~~~~~~~g~~~~~ 214 (625)
T 2z86_A 147 LLNIKYVRQKD----YGYQLCAVRNLGLR----AAKYNYVAILDCDMAP-NPLWVQSYMELLAV---DDNVALIGPRKYI 214 (625)
T ss_dssp TSCEEEEEECC----CSCCHHHHHHHHHH----HCCSSEEEEECTTEEE-CTTHHHHHHHHHHH---CTTEEEECCEEEE
T ss_pred cCCeEEEEeCC----CCcchhHHHHHHHH----hCCcCEEEEECCCCCC-CHHHHHHHHHHHhc---CCceEEEEeeeec
Confidence 02256666643 22479999999999 6899999999999995 89999999999973 4678888766555
Q ss_pred c
Q 006639 330 Y 330 (637)
Q Consensus 330 ~ 330 (637)
.
T Consensus 215 ~ 215 (625)
T 2z86_A 215 D 215 (625)
T ss_dssp C
T ss_pred c
Confidence 4
No 4
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.74 E-value=3e-18 Score=171.86 Aligned_cols=220 Identities=11% Similarity=0.025 Sum_probs=137.6
Q ss_pred CceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCc
Q 006639 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (637)
Q Consensus 93 P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 172 (637)
|.|+|+||+|| ++ ..+.+||.|+++++|| .++|+|+|||++|.|.+.+.+..
T Consensus 1 p~vSViIp~yn---~~-~~l~~~l~Sl~~q~~~--~~eiivvDd~S~d~t~~~~~~~~---------------------- 52 (255)
T 1qg8_A 1 PKVSVIMTSYN---KS-DYVAKSISSILSQTFS--DFELFIMDDNSNEETLNVIRPFL---------------------- 52 (255)
T ss_dssp CCEEEEEEESS---CT-TTHHHHHHHHHTCSCC--CEEEEEEECSCCHHHHHHHGGGG----------------------
T ss_pred CeEEEEEEcCC---CH-HHHHHHHHHHHhccCC--ceEEEEEECCCCchHHHHHHHHh----------------------
Confidence 78999999999 54 4899999999999999 79999999999997744332100
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCe
Q 006639 173 YFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPH 252 (637)
Q Consensus 173 yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~ 252 (637)
..++
T Consensus 53 ----------------------------------------------------------------------------~~~~ 56 (255)
T 1qg8_A 53 ----------------------------------------------------------------------------NDNR 56 (255)
T ss_dssp ----------------------------------------------------------------------------GSTT
T ss_pred ----------------------------------------------------------------------------hcCC
Confidence 0022
Q ss_pred EEEEeccCCC---CCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCccc
Q 006639 253 LVYISREKRP---KHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYF 329 (637)
Q Consensus 253 l~Yv~Rek~~---g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f 329 (637)
+.|+..+... ...+.++++|+|.|++ .++||||+++|+|.++ .|++|.+++..|.+ .+++++|.+....
T Consensus 57 i~~i~~~~~~~~~~~~n~G~~~a~N~gi~----~a~g~~i~~lD~Dd~~-~~~~l~~~~~~~~~---~~~~~~v~~~~~~ 128 (255)
T 1qg8_A 57 VRFYQSDISGVKERTEKTRYAALINQAIE----MAEGEYITYATDDNIY-MPDRLLKMVRELDT---HPEKAVIYSASKT 128 (255)
T ss_dssp EEEEECCCCSHHHHHSSCHHHHHHHHHHH----HCCCSEEEEEETTEEE-CTTHHHHHHHHHHH---CTTCCEEEEEEEE
T ss_pred EEEEecccccccccccccCHHHHHHHHHH----HcCCCEEEEeCCCCcc-ChHHHHHHHHHHHh---CCCceEEEeceEE
Confidence 4556554100 0013479999999999 6899999999999996 89999999999973 3567777765544
Q ss_pred c--Ccchh-hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHHhhcC
Q 006639 330 Y--DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEG 406 (637)
Q Consensus 330 ~--D~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~~~~g 406 (637)
. |.-+. ...+.... ............|++.++||+++.
T Consensus 129 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~rr~~~~-------------------------------------- 169 (255)
T 1qg8_A 129 YHLNENRDIVKETVRPA-AQVTWNAPCAIDHCSVMHRYSVLE-------------------------------------- 169 (255)
T ss_dssp EEEC---CEEEEEEECC-CSCBSCCTTTSCGGGEEEETHHHH--------------------------------------
T ss_pred EEeCCCCcchhhccCch-HHHHHhhcCCCccceEEEEHHHHH--------------------------------------
Confidence 3 33222 10000000 011112233456777888888773
Q ss_pred CcCCCCCchhhhHHHHhHhhcccccccccccccccc------cC-cccchhHHHHHHHHhCCCeEEEeCCCCceeeeccC
Q 006639 407 KTGGYSSNISRSLDEAHRVADCGYEYGSSWGDEVGC------LY-GATAEDNLTGLVIHSKGWRSGYCLPIPHAFLGCAS 479 (637)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~------~~-~sltED~~ts~rl~~~Gwr~~y~~~~~~~~~g~aP 479 (637)
++| +|| +. ....||.++.+++..+| ++.|++. ....+-..+
T Consensus 170 -----------------~~g-------------~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~-~~~~~r~~~ 217 (255)
T 1qg8_A 170 -----------------KVK-------------EKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDE-ELDLNYITD 217 (255)
T ss_dssp -----------------HHH-------------HHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEE-EEEEEEEC-
T ss_pred -----------------hhc-------------ccccccccCCcccchHHHHHHHHHHHHhC-CEEEecC-cEEEEEEcC
Confidence 232 134 22 24689999999999987 6888853 345556667
Q ss_pred CCHHHHH--HHHHHHHhh
Q 006639 480 PSGPAGM--RQQKRWATG 495 (637)
Q Consensus 480 ~tl~~~~--~QR~RWa~G 495 (637)
.+..... +||.+|.+.
T Consensus 218 ~s~s~~~~~~~~~~~~~~ 235 (255)
T 1qg8_A 218 QSIHFQLFELEKNEFVRN 235 (255)
T ss_dssp -------------CTGGG
T ss_pred CccchhHHHHHHHHHHHh
Confidence 7776655 445555443
No 5
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=99.71 E-value=8.2e-17 Score=159.61 Aligned_cols=109 Identities=15% Similarity=0.144 Sum_probs=88.2
Q ss_pred CCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCC
Q 006639 91 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAP 170 (637)
Q Consensus 91 ~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p 170 (637)
..|.|+|+||+|| ++ ..+.+||.|+++++|| .++|+|+|||++|.|.+.+.+..
T Consensus 3 ~~p~vsViIp~yn---~~-~~l~~~l~Sl~~q~~~--~~eiIvvDd~S~d~t~~~~~~~~-------------------- 56 (240)
T 3bcv_A 3 LIPKVSVIVPIYN---VE-KYLDQCVQALLAQTLS--DIEIILIDDESPDNCPKICDDYA-------------------- 56 (240)
T ss_dssp CCCSEEEEEEESS---CT-TTHHHHHHHHHTCSSS--SEEEEEEECCCSSSHHHHHHHHH--------------------
T ss_pred CCCcEEEEEecCC---CH-HHHHHHHHHHHhCcCC--CeEEEEEECCCCcCHHHHHHHHH--------------------
Confidence 4689999999999 54 4899999999999999 79999999999998854443310
Q ss_pred CccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCC
Q 006639 171 FRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEI 250 (637)
Q Consensus 171 ~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 250 (637)
. ..
T Consensus 57 --------------------------------~---------------------------------------------~~ 59 (240)
T 3bcv_A 57 --------------------------------A---------------------------------------------QY 59 (240)
T ss_dssp --------------------------------H---------------------------------------------HC
T ss_pred --------------------------------h---------------------------------------------hC
Confidence 0 01
Q ss_pred CeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006639 251 PHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLG 313 (637)
Q Consensus 251 p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d 313 (637)
|++.+++.+ +.++++|.|.|++ .++||||+++|+|.++ +|++|.+++..+.+
T Consensus 60 ~~i~~i~~~------n~G~~~a~N~g~~----~a~g~~i~~lD~Dd~~-~~~~l~~l~~~~~~ 111 (240)
T 3bcv_A 60 PNIKVIHKK------NAGLGMACNSGLD----VATGEYVAFCDSDDYV-DSDMYMTMYNVAQK 111 (240)
T ss_dssp SSEEEEECC------CCCHHHHHHHHHH----HCCSSEEEECCTTCCC-CTTHHHHHHHHHHH
T ss_pred CCEEEEECC------CCChHHHHHHHHH----HcCCCEEEEECCCCcC-CHHHHHHHHHHHHh
Confidence 234556432 2479999999999 6899999999999996 89999999999975
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.70 E-value=1.8e-16 Score=179.38 Aligned_cols=115 Identities=15% Similarity=0.076 Sum_probs=92.8
Q ss_pred cCCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcch-HHHHHHHHhhhhhhhhhhhhccccc
Q 006639 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLN-FYSLVEASKFAKLWVPFCKKYNVQI 167 (637)
Q Consensus 89 ~~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t-~~~l~ea~~fa~~w~pfc~~~~v~~ 167 (637)
.+++|.|+|+||+|| |+.+.+.+||.|+++..||...++|+|+||||+|.| .+.+.+..
T Consensus 108 ~~~~P~vSVIIp~yN---e~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~----------------- 167 (570)
T 2d7i_A 108 LETLPNTSIIIPFHN---EGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYM----------------- 167 (570)
T ss_dssp ESSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHH-----------------
T ss_pred CCCCCCeEEEEEECC---CCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHH-----------------
Confidence 457899999999999 776799999999999999954569999999999987 33333210
Q ss_pred cCCCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCC
Q 006639 168 RAPFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLS 247 (637)
Q Consensus 168 r~p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 247 (637)
T Consensus 168 -------------------------------------------------------------------------------- 167 (570)
T 2d7i_A 168 -------------------------------------------------------------------------------- 167 (570)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006639 248 DEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLG 313 (637)
Q Consensus 248 ~~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d 313 (637)
...|++.+++.+++ .++++|+|.|++ .+++|||+++|+|.++ +|++|.+++..+.+
T Consensus 168 ~~~~~v~vi~~~~n-----~G~~~A~N~G~~----~A~gd~i~fLD~D~~~-~p~~L~~ll~~l~~ 223 (570)
T 2d7i_A 168 ALFPSVRILRTKKR-----EGLIRTRMLGAS----VATGDVITFLDSHCEA-NVNWLPPLLDRIAR 223 (570)
T ss_dssp TTSTTEEEEECSSC-----CCHHHHHHHHHH----HCCSSEEEECCSSEEE-CTTCSHHHHHHHHH
T ss_pred HhCCeEEEEECCCC-----CCHHHHHHHHHH----hcCCCEEEEEcCCccc-cccHHHHHHHHHHh
Confidence 01133566665543 369999999999 6899999999999996 89999999999974
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.69 E-value=7.8e-17 Score=183.43 Aligned_cols=221 Identities=16% Similarity=0.090 Sum_probs=152.0
Q ss_pred CCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCC
Q 006639 91 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAP 170 (637)
Q Consensus 91 ~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p 170 (637)
..|.|+|+||||| ++ ..+.+||.|+++++|| .++|+|+|||++|.|.+.+.+..+
T Consensus 373 ~~~~vsiii~~yn---~~-~~l~~~l~s~~~q~~~--~~eiivvdd~S~d~t~~~~~~~~~------------------- 427 (625)
T 2z86_A 373 RVPLVSIYIPAYN---CS-KYIVRCVESALNQTIT--DLEVCICDDGSTDDTLRILQEHYA------------------- 427 (625)
T ss_dssp SSCSEEEEEEESS---CT-TTHHHHHHHHHSSSCC--SEEEEEEEESCSSSHHHHHHHHHT-------------------
T ss_pred cCCeEEEEEeCCC---CH-HHHHHHHHHHHhCcCC--CeEEEEEECcCChhHHHHHHHHHh-------------------
Confidence 4689999999999 43 4899999999999999 789999999999988554433100
Q ss_pred CccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCC
Q 006639 171 FRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEI 250 (637)
Q Consensus 171 ~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 250 (637)
..
T Consensus 428 ------------------------------------------------------------------------------~~ 429 (625)
T 2z86_A 428 ------------------------------------------------------------------------------NH 429 (625)
T ss_dssp ------------------------------------------------------------------------------TC
T ss_pred ------------------------------------------------------------------------------hC
Confidence 01
Q ss_pred CeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEeCCcccc
Q 006639 251 PHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQSPQYFY 330 (637)
Q Consensus 251 p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQtPq~f~ 330 (637)
|++.+++ ++ +.++++|+|.|++ .++||||+++|+|.++ +|++|.+++..|.. ++++++|.+...+.
T Consensus 430 ~~i~~~~-~~-----n~G~~~a~n~g~~----~a~g~~i~~ld~D~~~-~~~~l~~~~~~~~~---~~~~~~v~~~~~~~ 495 (625)
T 2z86_A 430 PRVRFIS-QK-----NKGIGSASNTAVR----LCRGFYIGQLDSDDFL-EPDAVELCLDEFRK---DLSLACVYTTNRNI 495 (625)
T ss_dssp TTEEEEE-EC-----CCCHHHHHHHHHH----HCCSSEEEECCTTCEE-CTTHHHHHHHHHHH---CTTCSEEEEEEEEE
T ss_pred CcEEEEe-CC-----CCCHHHHHHHHHH----hcCCCEEEEECCCccc-ChhHHHHHHHHHHh---CCCeeEEEeeeEEE
Confidence 2345554 22 2479999999999 6899999999999996 89999999998862 45678887765544
Q ss_pred Ccchh-hHhHhhhhhhhhcccCCceeeccCceeechhhhccccchhhccccchHHHHHHhhCCcHHHHHHHHHhhcCCcC
Q 006639 331 DRPEN-LCILNEYIGKGIVGIQGPFYQGTGTFHRRDVVYGLCLDQIEHQGNIVEDELLKKFGNSKEFIKSAAQTLEGKTG 409 (637)
Q Consensus 331 D~~~~-~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~g~~~~~~e~~~~~~~~~~~~~~g~s~~~i~s~~~~~~g~~~ 409 (637)
|+-++ ....+.......+.......+|++.++||+++.
T Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~----------------------------------------- 534 (625)
T 2z86_A 496 DREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWN----------------------------------------- 534 (625)
T ss_dssp CTTSCEEEECCCCSSCCHHHHTTSCCCCSCEEEEHHHHT-----------------------------------------
T ss_pred CCCCCEeccCcccccCCHHHHhhcccCCceEEEEHHHHH-----------------------------------------
Confidence 33322 100000000011122334556777777777663
Q ss_pred CCCCchhhhHHHHhHhhcccccccccccccccccCc-ccchhHHHHHHHHhCCCeEEEeCCCCceee---eccCCCHHHH
Q 006639 410 GYSSNISRSLDEAHRVADCGYEYGSSWGDEVGCLYG-ATAEDNLTGLVIHSKGWRSGYCLPIPHAFL---GCASPSGPAG 485 (637)
Q Consensus 410 ~~~~~~~~~~~~~~~vg~c~ye~~t~wg~~~G~~~~-sltED~~ts~rl~~~Gwr~~y~~~~~~~~~---g~aP~tl~~~ 485 (637)
++| ||++. ...||.++.+|+..+| ++.|++. ++.. .....|.+..
T Consensus 535 --------------~~g--------------gfd~~~~~~eD~dl~~r~~~~g-~~~~~~~--~~~~~r~h~~~~s~~~~ 583 (625)
T 2z86_A 535 --------------LTE--------------GFNESISNAVDYDMYLKLSEVG-PFKHINK--ICYNRVLHGENTSIKKL 583 (625)
T ss_dssp --------------TTT--------------CCCSSCSSCHHHHHHHHHTTTS-CEEEEEE--EEEEEECC----CCSSH
T ss_pred --------------HhC--------------CCCCccCChHHHHHHHHHHHhC-CEEEeCC--cEEEEEECCCccchhhH
Confidence 343 67765 4689999999999999 8999863 3433 4455677777
Q ss_pred HHHHHHHHhhhhHHH
Q 006639 486 MRQQKRWATGLLEIL 500 (637)
Q Consensus 486 ~~QR~RWa~G~~qil 500 (637)
..|+.+|.+...+.+
T Consensus 584 ~~~~~~~~~~~~~~l 598 (625)
T 2z86_A 584 DIQKENHFKVVNESL 598 (625)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888876655554
No 8
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.68 E-value=3e-16 Score=174.39 Aligned_cols=112 Identities=15% Similarity=0.094 Sum_probs=90.7
Q ss_pred cCCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhcccccc
Q 006639 89 IQELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIR 168 (637)
Q Consensus 89 ~~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r 168 (637)
++++|.|+|+||+|| |+...+.+||.|+++..||...++|+|+||||+|.|...+.+
T Consensus 62 ~~~~p~vSVIIp~yN---~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~-------------------- 118 (501)
T 2ffu_A 62 RVDLPATSVVITFHN---EARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLG-------------------- 118 (501)
T ss_dssp CSSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGG--------------------
T ss_pred CcCCCCEEEEEEeCc---CcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHh--------------------
Confidence 457899999999999 765589999999999999965579999999999976311000
Q ss_pred CCCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCC
Q 006639 169 APFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSD 248 (637)
Q Consensus 169 ~p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 248 (637)
T Consensus 119 -------------------------------------------------------------------------------- 118 (501)
T 2ffu_A 119 -------------------------------------------------------------------------------- 118 (501)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006639 249 EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLG 313 (637)
Q Consensus 249 ~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d 313 (637)
..|++.|+..+++ .++++|+|.|++ .++||||+++|+|.++ .|++|.+++..+.+
T Consensus 119 ~~~~v~vi~~~~n-----~G~~~A~N~G~~----~A~gd~i~flD~D~~~-~p~~L~~ll~~~~~ 173 (501)
T 2ffu_A 119 KIEKVRVLRNDRR-----EGLMRSRVRGAD----AAQAKVLTFLDSHCEC-NEHWLEPLLERVAE 173 (501)
T ss_dssp GBTTEEEEECSSC-----CHHHHHHHHHHH----HCCSSEEEECCSSEEE-CTTCHHHHHHHHHH
T ss_pred cCCCEEEEECCCC-----cCHHHHHHHHHH----hcCCCEEEEECCCccc-CccHHHHHHHHHHh
Confidence 0123566665543 369999999999 6899999999999996 79999999999974
No 9
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.46 E-value=3.2e-13 Score=142.24 Aligned_cols=124 Identities=14% Similarity=0.053 Sum_probs=91.2
Q ss_pred CCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccC
Q 006639 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRA 169 (637)
Q Consensus 90 ~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~ 169 (637)
..-|.|+|+||+|| |+ +.+.++|.|++++.||. .++|+|+||||+|.|.+.+.+. +.+
T Consensus 45 ~~~~~vSViIp~yN---~~-~~l~~~l~sl~~q~~~~-~~eiivVDdgS~D~t~~~~~~~--------------~~~--- 102 (329)
T 3ckj_A 45 KAGRTISVVLPALD---EE-DTIGSVIDSISPLVDGL-VDELIVLDSGSTDDTEIRAVAA--------------GAR--- 102 (329)
T ss_dssp TTTCCEEEEEEESS---CT-TTHHHHHHHHGGGBTTT-BSEEEEEECSCCSSHHHHHHHT--------------TCE---
T ss_pred ccCCcEEEEEeeCC---CH-HHHHHHHHHHHHhhCCC-CcEEEEEeCCCCchHHHHHHHh--------------hhh---
Confidence 44689999999999 44 47999999999999993 5899999999999886554431 000
Q ss_pred CCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCC
Q 006639 170 PFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDE 249 (637)
Q Consensus 170 p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 249 (637)
+.
T Consensus 103 --------------------------------------------------------------------~~---------- 104 (329)
T 3ckj_A 103 --------------------------------------------------------------------VV---------- 104 (329)
T ss_dssp --------------------------------------------------------------------EE----------
T ss_pred --------------------------------------------------------------------hc----------
Confidence 00
Q ss_pred CCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCC-CCchHHHHHHHHHhhccCCCCcEEEEeCC
Q 006639 250 IPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMY-ANNPEIVLQAMCLHLGSKNENEFAFIQSP 326 (637)
Q Consensus 250 ~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~-~p~pd~L~~~v~~f~d~~~~~~va~VQtP 326 (637)
+++.++.+. ..+.+|++|+|.|++ .++||||+++|+|.+ + +|++|.+++..+.. ++++++|+..
T Consensus 105 -~~~~~~~~~----~~n~G~~~a~n~g~~----~a~gd~i~~lD~D~~~~-~p~~l~~l~~~l~~---~~~~~~v~g~ 169 (329)
T 3ckj_A 105 -SREQALPEV----PIRPGKGEALWRSLA----ASRGDIVVFVDSDLINP-HPMFVPWLVGPLLT---GDGVHLVKSF 169 (329)
T ss_dssp -EHHHHCTTS----CCCCSHHHHHHHHHH----HCCCSEEEECCTTEESC-CTTHHHHHHHHHHS---CSSCCEEEEE
T ss_pred -cceeeeccC----CCCCCHHHHHHHHHH----hCCCCEEEEECCCCCCc-ChHHHHHHHHHHHh---CCCccEEEEE
Confidence 000111101 123579999999999 689999999999998 5 79999999998762 3567777653
No 10
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.46 E-value=2.1e-13 Score=156.71 Aligned_cols=124 Identities=15% Similarity=0.147 Sum_probs=87.8
Q ss_pred CCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCe-EEEEecCCCCcch-HHHHHHHHhhhhhhhhhhhhcccccc
Q 006639 91 ELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKL-ACYVSDDACSPLN-FYSLVEASKFAKLWVPFCKKYNVQIR 168 (637)
Q Consensus 91 ~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl-~vyv~DDg~~~~t-~~~l~ea~~fa~~w~pfc~~~~v~~r 168 (637)
.-|.|+|+||||| ++ +.+.++|.|++++.|+.+.. +|+|+|||++|.+ ...+.|
T Consensus 178 ~~pkVSVVIptYN---~~-~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e-------------------- 233 (657)
T 4fix_A 178 GTANIAVGIPTFN---RP-ADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPA-------------------- 233 (657)
T ss_dssp SCCCEEEECCBSS---CH-HHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHH--------------------
T ss_pred CCCeEEEEEEecC---CH-HHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHH--------------------
Confidence 4589999999999 65 58999999999999955444 8999999998842 001111
Q ss_pred CCCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCC
Q 006639 169 APFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSD 248 (637)
Q Consensus 169 ~p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 248 (637)
.++.. +
T Consensus 234 -----------------------------------~~~~~----------~----------------------------- 239 (657)
T 4fix_A 234 -----------------------------------AAARL----------G----------------------------- 239 (657)
T ss_dssp -----------------------------------HHHHH----------G-----------------------------
T ss_pred -----------------------------------HHHhc----------C-----------------------------
Confidence 01000 0
Q ss_pred CCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhccCCCCcEEEEe
Q 006639 249 EIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGSKNENEFAFIQ 324 (637)
Q Consensus 249 ~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~~~~~~va~VQ 324 (637)
|++.|+..+ +.+.|+|.|.|++...-.+++|||+.+|+|.++ +|++|.+++.++.. +++++.|.
T Consensus 240 --~~I~vI~~~------N~G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~-~pd~L~~ll~~l~~---~~~~~~vg 303 (657)
T 4fix_A 240 --SRLSIHDQP------NLGGSGGYSRVMYEALKNTDCQQILFMDDDIRL-EPDSILRVLAMHRF---AKAPMLVG 303 (657)
T ss_dssp --GGEEEEECC------CCHHHHHHHHHHHHHHHHCCCSEEEEECSSEEE-CTHHHHHHHHHHHH---BSSCCEEE
T ss_pred --CCEEEEECC------CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCcc-ChhHHHHHHHHHHh---CCCcEEEE
Confidence 234566543 246899999999831001267999999999995 89999999999974 34556565
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.42 E-value=1.4e-14 Score=168.31 Aligned_cols=108 Identities=13% Similarity=0.099 Sum_probs=0.0
Q ss_pred CceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccccCCCc
Q 006639 93 PPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQIRAPFR 172 (637)
Q Consensus 93 P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~r~p~~ 172 (637)
|.|+|+||||| ++ +.+.+||.|+++++|| .++|+|+||||+|.|.+.+.+..+ +
T Consensus 2 p~vSVIIp~yN---~~-~~L~~~L~Sll~Qt~~--~~EIIVVDDgStD~t~~il~~~~~----------~---------- 55 (729)
T 3l7i_A 2 NKLTIIVTYYN---AE-EYITGCLESIKQQRTQ--DFNLIIVNDGSTDQSKKLMDEAIK----------D---------- 55 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEEcCC---CH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCCcHHHHHHHHHH----------h----------
Confidence 78999999999 54 5899999999999999 789999999999988555443100 0
Q ss_pred cCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCCCCCCe
Q 006639 173 YFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLSDEIPH 252 (637)
Q Consensus 173 yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~p~ 252 (637)
++ ++
T Consensus 56 -----------------------------------------------------------~~-----------------~~ 59 (729)
T 3l7i_A 56 -----------------------------------------------------------YD-----------------KN 59 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------------------------------------CC-----------------CC
Confidence 00 12
Q ss_pred EEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006639 253 LVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHL 312 (637)
Q Consensus 253 l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~ 312 (637)
+.|+..++ +.++++|.|.|++ .++||||+.+|+|.++ .|++|.+++..+.
T Consensus 60 i~~i~~~~-----n~G~~~arN~gi~----~A~gdyI~flD~Dd~~-~p~~l~~l~~~l~ 109 (729)
T 3l7i_A 60 IRFIDLDE-----NSGHAHARNIALE----EVETPYFMFLDADDEL-ASYAITFYLEKFN 109 (729)
T ss_dssp ------------------------------------------------------------
T ss_pred EEEEECCC-----CCCHHHHHHHHHH----hccCCEEEEECCCCCC-ChhHHHHHHHHhc
Confidence 34454433 2469999999999 7999999999999996 8999999999886
No 12
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.35 E-value=9.4e-13 Score=136.76 Aligned_cols=60 Identities=10% Similarity=-0.149 Sum_probs=44.4
Q ss_pred cccCccc---chhHHHHHHHHhCCCeEEEeCCCCc----------eeeeccCCCHHHHHHHHHHHHhhhhHHH
Q 006639 441 GCLYGAT---AEDNLTGLVIHSKGWRSGYCLPIPH----------AFLGCASPSGPAGMRQQKRWATGLLEIL 500 (637)
Q Consensus 441 G~~~~sl---tED~~ts~rl~~~Gwr~~y~~~~~~----------~~~g~aP~tl~~~~~QR~RWa~G~~qil 500 (637)
||+.... .||.++.+|++.+||++.+.++... ......|+.++.+.+||.||+++++..+
T Consensus 191 GFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 191 GFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp SCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHHHHTTTSSGGGC
T ss_pred CCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcccEEcCCCcccC
Confidence 6776544 5999999999999998874321001 1134689999999999999999999876
No 13
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.27 E-value=2.2e-11 Score=131.51 Aligned_cols=123 Identities=15% Similarity=0.092 Sum_probs=87.9
Q ss_pred CCCCceeEEEecCCCCCCchHHHHHHHHHHHc--CCCCCCCeEEEEecCCCCcchHHHHHHHHhhhhhhhhhhhhccccc
Q 006639 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLA--VDYPVHKLACYVSDDACSPLNFYSLVEASKFAKLWVPFCKKYNVQI 167 (637)
Q Consensus 90 ~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~--ldYP~~kl~vyv~DDg~~~~t~~~l~ea~~fa~~w~pfc~~~~v~~ 167 (637)
...|.|+|+||||| |. +.+.++|.++.+ .+||. .++|+|+||||+|.|.+.+.+. +.
T Consensus 91 ~~~p~vSVVIP~yN---e~-~~l~~~l~sl~~~l~~~~~-~~EIIVVDDgStD~T~~i~~~~--------------~~-- 149 (387)
T 3f1y_A 91 ELGLTVSAVLPSRN---VA-DTVGGIIDEIHALNERAPL-IDQILVVDADSEDGTAGVAASH--------------GA-- 149 (387)
T ss_dssp HHTCCEEEEEEESS---CT-TTHHHHHHHHHHHHHHSCC-CSEEEEEECSCSSSHHHHHHHT--------------TC--
T ss_pred cCCCeEEEEEEcCC---CH-HHHHHHHHHHHHHHhcCCC-CeEEEEEcCcCCccHHHHHHHh--------------Cc--
Confidence 34699999999999 53 478899999887 46764 4799999999999986554431 00
Q ss_pred cCCCccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccccccccCCCceEEEeecCCCCCC
Q 006639 168 RAPFRYFPDSEPSDSSSGELLQDWKNMKKEYDKLSQNIEHAAKRSSLFDLTGGMTVFSNTERMNHPTIVKVISENKGGLS 247 (637)
Q Consensus 168 r~p~~yf~~~~~~~~~~~~~~~~~~~~~~~y~~l~~~i~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 247 (637)
+++..
T Consensus 150 ---------------------------------------------------------------------~v~~~------ 154 (387)
T 3f1y_A 150 ---------------------------------------------------------------------EVYSE------ 154 (387)
T ss_dssp ---------------------------------------------------------------------EEEEG------
T ss_pred ---------------------------------------------------------------------hhccc------
Confidence 00000
Q ss_pred CCCCeEEEEeccCCCCCCCCCchHHHHHHHHhcCCCCCCCEEEEecCCCC-CCchHHHHHHHHHhhccCCCCcEEEEeC
Q 006639 248 DEIPHLVYISREKRPKHPHHYKAGAMNVLTRVSGLMTNAPFMLNVDCDMY-ANNPEIVLQAMCLHLGSKNENEFAFIQS 325 (637)
Q Consensus 248 ~~~p~l~Yv~Rek~~g~~~~~KAGaLN~~L~~s~~~s~~e~i~v~DAD~~-~p~pd~L~~~v~~f~d~~~~~~va~VQt 325 (637)
.+.++..++ +.+|++|+|.|++ .++||||+++|||.. + +|++|.+++..+.+ ++++++|..
T Consensus 155 ----~~~~i~~~~-----n~G~g~A~n~G~~----~A~gd~i~~lDaD~~~~-~p~~L~~l~~~l~~---~p~~d~v~G 216 (387)
T 3f1y_A 155 ----NELMSGYGD-----AHGKGDAMWRALS----VTRGDLVLYIDADTRDF-RPQLAYGVLGPVLE---VPGVRFVKA 216 (387)
T ss_dssp ----GGTTGGGCS-----CCSHHHHHHHHTT----TCCSSEEEECCTTCSSC-CTHHHHTTHHHHHH---STTCCEEEE
T ss_pred ----ceeEecCCc-----cCCHHHHHHHHHH----hcCCCEEEEEcCCCCcC-CHHHHHHHHHHHHH---CCCceEEEE
Confidence 001111221 3479999999999 789999999999998 5 89999999999863 344555553
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.00 E-value=4.2e-09 Score=106.30 Aligned_cols=51 Identities=2% Similarity=-0.109 Sum_probs=41.1
Q ss_pred chHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhcc-CCCCcEEEEe
Q 006639 269 KAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLGS-KNENEFAFIQ 324 (637)
Q Consensus 269 KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d~-~~~~~va~VQ 324 (637)
.|.|+|.|++ .++|||++.+|+|.++ +|++|.+++.++.+. ..++++|.|-
T Consensus 62 ~a~a~N~Gi~----~A~g~yl~fln~D~~~-~~~~l~~l~~~~~~~~~~~~~vg~vg 113 (249)
T 2nxv_A 62 GFSWHKQMLP----RCKGRYVIFCHEDVEL-VDRGYDDLVAAIEALEEADPKWLVAG 113 (249)
T ss_dssp TTTHHHHHGG----GCCSSEEEEEETTEEC-SSCCHHHHHHHHHHHHHHCTTEEEEE
T ss_pred HHHHHHHHHH----hcCCCEEEEECCCccc-CccHHHHHHHHHHhcccCCCCeeEEe
Confidence 5789999999 7899999999999996 899999999988631 0025677663
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=98.67 E-value=6.6e-07 Score=96.80 Aligned_cols=41 Identities=20% Similarity=0.062 Sum_probs=36.0
Q ss_pred CCchHHHHHHH----HhcCCCCCCCEEEEecCCCC-CCchHHHHHHHHHhh
Q 006639 267 HYKAGAMNVLT----RVSGLMTNAPFMLNVDCDMY-ANNPEIVLQAMCLHL 312 (637)
Q Consensus 267 ~~KAGaLN~~L----~~s~~~s~~e~i~v~DAD~~-~p~pd~L~~~v~~f~ 312 (637)
.||++|+|.|+ . .++||+|+++|||.. . +|+.+.+++....
T Consensus 74 ~GkG~Al~~G~~~Al~----~a~gd~vv~mDADlq~~-~P~~i~~Ll~~l~ 119 (397)
T 2bo4_A 74 PGKGDGMNTALRYFLE----ETQWERIHFYDADITSF-GPDWITKAEEAAD 119 (397)
T ss_dssp SSHHHHHHHHHHHHHH----HCCCSEEEECCTTCSSC-CHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH----hCCCCEEEEEcCCCCCC-CHHHHHHHHHHHH
Confidence 58999999999 6 589999999999995 3 6999999888775
No 16
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=97.90 E-value=6.5e-05 Score=80.71 Aligned_cols=40 Identities=25% Similarity=0.121 Sum_probs=32.4
Q ss_pred CCchHHHHHHHHhcCCCC---CCCEEEEecCCCCCCchHHHHHHHHHhh
Q 006639 267 HYKAGAMNVLTRVSGLMT---NAPFMLNVDCDMYANNPEIVLQAMCLHL 312 (637)
Q Consensus 267 ~~KAGaLN~~L~~s~~~s---~~e~i~v~DAD~~~p~pd~L~~~v~~f~ 312 (637)
+||..|+-.|+. .+ ++|+|+++|||-+ .|.++.+.+.-+.
T Consensus 143 ~GKG~Am~aGl~----~A~~~~gd~Vv~~DaDl~--iP~~v~~~~kgy~ 185 (394)
T 2zu9_A 143 SGKGEGMLVGLL----LAKAIGAEYVGFVDADNY--IPGAVNEYVKDYA 185 (394)
T ss_dssp CSHHHHHHHHHH----HHHHTTCSEEEECCSCBS--CHHHHHHHHHHHH
T ss_pred CChHHHHHHHHH----HHhhCCCCEEEEEeCCCC--CHHHHHHHHHHhh
Confidence 389999999998 56 8999999999996 4788766555443
No 17
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=97.83 E-value=2.4e-05 Score=82.39 Aligned_cols=44 Identities=14% Similarity=0.060 Sum_probs=36.4
Q ss_pred CCCCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcch
Q 006639 90 QELPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLN 142 (637)
Q Consensus 90 ~~~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t 142 (637)
..+..+.|+||+|| |.. .++.++++.-|. ..+|+|+|||+.|.|
T Consensus 50 ~i~~klSIVVPvYN---Ee~----~lLesVl~qi~~--d~eIIlVdDGS~D~s 93 (391)
T 2wvl_A 50 DVLEQTAIVVPTRN---ERL----KLLEGVLSGIPH--EALILVASNSSPDRF 93 (391)
T ss_dssp HHHTTEEEEEEESS---CCH----HHHHHHHHTSCT--TSEEEEEECCCHHHH
T ss_pred hHHhceEEEEeccC---cHH----HHHHHHHhcCCC--CceEEEEECCCCCCh
Confidence 34678999999999 653 368888888877 688999999998876
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=97.79 E-value=7.5e-05 Score=79.11 Aligned_cols=46 Identities=17% Similarity=0.166 Sum_probs=40.0
Q ss_pred CCceeEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEecCCCCcch
Q 006639 92 LPPVDMFVTTADAELEPPIITVNTVLSLLAVDYPVHKLACYVSDDACSPLN 142 (637)
Q Consensus 92 ~P~VdV~V~t~n~~~Ep~~~v~~Tv~s~l~ldYP~~kl~vyv~DDg~~~~t 142 (637)
++.+.|+|+||| -| + +.+++.|+++.+.+.+...|+|+|||+.++|
T Consensus 1 ~~~~pViI~~yN---Rp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~ 46 (343)
T 1fo8_A 1 LAVIPILVIACD---RS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEET 46 (343)
T ss_dssp CCCCCEEEEESS---CT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHH
T ss_pred CCcccEEEEECC---cH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHH
Confidence 466889999999 77 6 9999999999997777788999999997755
No 19
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=38.97 E-value=51 Score=31.99 Aligned_cols=45 Identities=16% Similarity=0.164 Sum_probs=31.1
Q ss_pred chHHHHHHHHhcCCCCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006639 269 KAGAMNVLTRVSGLMTNAPFMLNVDCDMYANNPEIVLQAMCLHLG 313 (637)
Q Consensus 269 KAGaLN~~L~~s~~~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d 313 (637)
....+-+||+...-..+.+++++.|||+=+-.++.+.+++..+.+
T Consensus 83 r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 83 RTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp HHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 356677787731100126899999999844479999999888763
No 20
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=31.67 E-value=77 Score=29.45 Aligned_cols=40 Identities=15% Similarity=0.086 Sum_probs=30.8
Q ss_pred CchHHHHHHHHhcCCCCCCCEEEEecCCC-CCCchHHHHHHHHHh
Q 006639 268 YKAGAMNVLTRVSGLMTNAPFMLNVDCDM-YANNPEIVLQAMCLH 311 (637)
Q Consensus 268 ~KAGaLN~~L~~s~~~s~~e~i~v~DAD~-~~p~pd~L~~~v~~f 311 (637)
+-++++..|++. ..+.+.+++++||+ .+ +++.+++++..+
T Consensus 72 G~~~si~~al~~---~~~~~~vlv~~~D~P~i-~~~~i~~l~~~~ 112 (197)
T 3d5n_A 72 GISTSLKLGLRF---FKDYDAVLVALGDMPFV-TKEDVNKIINTF 112 (197)
T ss_dssp CHHHHHHHHHHH---TTTSSEEEEEETTCCCS-CHHHHHHHHHTC
T ss_pred CHHHHHHHHHHh---hccCCcEEEEeCCcccc-CHHHHHHHHHHh
Confidence 457888888874 23458999999999 44 688999888766
No 21
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=28.32 E-value=53 Score=31.80 Aligned_cols=46 Identities=11% Similarity=0.016 Sum_probs=32.4
Q ss_pred CchHHHHHHHHhcCC---CCCCCEEEEecCCCCCCchHHHHHHHHHhhc
Q 006639 268 YKAGAMNVLTRVSGL---MTNAPFMLNVDCDMYANNPEIVLQAMCLHLG 313 (637)
Q Consensus 268 ~KAGaLN~~L~~s~~---~s~~e~i~v~DAD~~~p~pd~L~~~v~~f~d 313 (637)
...+++-+|+..-.- ..+.++|++.|||+-+-.++.+.+++..+.+
T Consensus 84 ~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~ 132 (246)
T 3f1c_A 84 DRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALE 132 (246)
T ss_dssp SHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHh
Confidence 457777777763100 0236999999999833378999999988864
Done!